Psyllid ID: psy505
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
|
Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 161 | 2.2.26 [Sep-21-2011] | |||||||
| Q9Y4P8 | 454 | WD repeat domain phosphoi | yes | N/A | 0.664 | 0.235 | 0.651 | 9e-33 | |
| Q80W47 | 445 | WD repeat domain phosphoi | yes | N/A | 0.521 | 0.188 | 0.764 | 3e-32 | |
| Q6AY57 | 445 | WD repeat domain phosphoi | yes | N/A | 0.521 | 0.188 | 0.764 | 3e-32 | |
| Q5ZHN3 | 436 | WD repeat domain phosphoi | yes | N/A | 0.521 | 0.192 | 0.764 | 3e-32 | |
| Q7ZWU5 | 435 | WD repeat domain phosphoi | N/A | N/A | 0.521 | 0.193 | 0.752 | 1e-31 | |
| Q8R3E3 | 446 | WD repeat domain phosphoi | no | N/A | 0.521 | 0.188 | 0.588 | 3e-19 | |
| Q5MNZ9 | 446 | WD repeat domain phosphoi | no | N/A | 0.521 | 0.188 | 0.588 | 7e-19 | |
| Q6DCN1 | 433 | WD repeat domain phosphoi | N/A | N/A | 0.652 | 0.242 | 0.451 | 1e-18 | |
| A2RAG5 | 415 | Autophagy-related protein | yes | N/A | 0.484 | 0.187 | 0.445 | 3e-13 | |
| Q1DKJ3 | 417 | Autophagy-related protein | N/A | N/A | 0.484 | 0.187 | 0.445 | 3e-13 |
| >sp|Q9Y4P8|WIPI2_HUMAN WD repeat domain phosphoinositide-interacting protein 2 OS=Homo sapiens GN=WIPI2 PE=1 SV=1 | Back alignment and function desciption |
|---|
Score = 139 bits (349), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 71/109 (65%), Positives = 85/109 (77%), Gaps = 2/109 (1%)
Query: 43 FDADNLHAKTMIPAHD-SPLAALASLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIV 100
F+ DN K A A + SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIV
Sbjct: 20 FNQDNTEVKGASRAAGLGRRAVVWSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIV 79
Query: 101 ERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149
ERLFSSSLVA+VSL +PRKL VCHFK+G+EICNYS+SNTILAVKLNR++
Sbjct: 80 ERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQR 128
|
Probable early component of the autophagy machinery being involved in formation of preautophagosomal structures and their maturation into mature phagosomes in response to PtdIns3P. May bind PtdIns3P. Homo sapiens (taxid: 9606) |
| >sp|Q80W47|WIPI2_MOUSE WD repeat domain phosphoinositide-interacting protein 2 OS=Mus musculus GN=Wipi2 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124
SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIVERLFSSSLVA+VSL +PRKL VCH
Sbjct: 26 SLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCH 85
Query: 125 FKRGSEICNYSFSNTILAVKLNRKK 149
FK+G+EICNYS+SNTILAVKLNR++
Sbjct: 86 FKKGTEICNYSYSNTILAVKLNRQR 110
|
Probable early component of the autophagy machinery being involved in formation of preautophagosomal structures and their maturation into mature phagosomes in response to PtdIns3P. Mus musculus (taxid: 10090) |
| >sp|Q6AY57|WIPI2_RAT WD repeat domain phosphoinositide-interacting protein 2 OS=Rattus norvegicus GN=Wipi2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124
SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIVERLFSSSLVA+VSL +PRKL VCH
Sbjct: 26 SLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCH 85
Query: 125 FKRGSEICNYSFSNTILAVKLNRKK 149
FK+G+EICNYS+SNTILAVKLNR++
Sbjct: 86 FKKGTEICNYSYSNTILAVKLNRQR 110
|
Probable early component of the autophagy machinery being involved in formation of preautophagosomal structures and their maturation into mature phagosomes in response to PtdIns3P. May bind PtdIns3P. Rattus norvegicus (taxid: 10116) |
| >sp|Q5ZHN3|WIPI2_CHICK WD repeat domain phosphoinositide-interacting protein 2 OS=Gallus gallus GN=WIPI2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 137 bits (345), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/85 (76%), Positives = 77/85 (90%), Gaps = 1/85 (1%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124
SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIVERLFSSSLVA+VSL +PRKL VCH
Sbjct: 26 SLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCH 85
Query: 125 FKRGSEICNYSFSNTILAVKLNRKK 149
FK+G+EICNYS+SNTILAVKLNR++
Sbjct: 86 FKKGTEICNYSYSNTILAVKLNRQR 110
|
Probable early component of the autophagy machinery being involved in formation of preautophagosomal structures and their maturation into mature phagosomes in response to PtdIns3P. May bind PtdIns3P. Gallus gallus (taxid: 9031) |
| >sp|Q7ZWU5|WIPI2_XENLA WD repeat domain phosphoinositide-interacting protein 2 OS=Xenopus laevis GN=wipi2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 135 bits (340), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 64/85 (75%), Positives = 76/85 (89%), Gaps = 1/85 (1%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124
SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIVERLFSSSLVA+VSL +PRKL VCH
Sbjct: 26 SLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCH 85
Query: 125 FKRGSEICNYSFSNTILAVKLNRKK 149
FK+G+EICNYS+SNT LAVKLNR++
Sbjct: 86 FKKGTEICNYSYSNTTLAVKLNRQR 110
|
Probable early component of the autophagy machinery being involved in formation of preautophagosomal structures and their maturation into mature phagosomes in response to PtdIns3P. May bind PtdIns3P. Xenopus laevis (taxid: 8355) |
| >sp|Q8R3E3|WIPI1_MOUSE WD repeat domain phosphoinositide-interacting protein 1 OS=Mus musculus GN=Wipi1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 94.4 bits (233), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 72/85 (84%), Gaps = 1/85 (1%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIY-ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124
SL++GTK+GY+LFSL+S++ L+Q++ N DV IVERLFSSSLV VVS + PR++ V H
Sbjct: 28 SLAIGTKAGYKLFSLSSVEQLDQVHGSNEIPDVYIVERLFSSSLVVVVSHTKPRQMNVYH 87
Query: 125 FKRGSEICNYSFSNTILAVKLNRKK 149
FK+G+EICNYS+S+ IL+++LNR++
Sbjct: 88 FKKGTEICNYSYSSNILSIRLNRQR 112
|
May play a role in autophagy. May regulate the trafficking of proteins involved in the mannose-6-phosphate receptor (MPR) recycling pathway. Mus musculus (taxid: 10090) |
| >sp|Q5MNZ9|WIPI1_HUMAN WD repeat domain phosphoinositide-interacting protein 1 OS=Homo sapiens GN=WIPI1 PE=1 SV=3 | Back alignment and function description |
|---|
Score = 93.2 bits (230), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 50/85 (58%), Positives = 71/85 (83%), Gaps = 1/85 (1%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIY-ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124
SL+ GTK+GY+LFSL+S++ L+Q++ N DV IVERLFSSSLV VVS + PR++ V H
Sbjct: 28 SLATGTKAGYKLFSLSSVEQLDQVHGSNEIPDVYIVERLFSSSLVVVVSHTKPRQMNVYH 87
Query: 125 FKRGSEICNYSFSNTILAVKLNRKK 149
FK+G+EICNYS+S+ IL+++LNR++
Sbjct: 88 FKKGTEICNYSYSSNILSIRLNRQR 112
|
May play a role in autophagy. May regulate the trafficking of proteins involved in the mannose-6-phosphate receptor (MPR) recycling pathway. Homo sapiens (taxid: 9606) |
| >sp|Q6DCN1|WIPI1_XENLA WD repeat domain phosphoinositide-interacting protein 1 OS=Xenopus laevis GN=wipi1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 92.4 bits (228), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 51/113 (45%), Positives = 68/113 (60%), Gaps = 8/113 (7%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MK+L T+ DTP NP+G+C L +N N YLAYPGS+S GEV ++DA+ L + IPAHDSP
Sbjct: 125 MKLLKTLLDTPRNPHGLCTLSINHSNSYLAYPGSSSTGEVSLYDANCLKCECTIPAHDSP 184
Query: 61 LAALASLSVGTK--------SGYRLFSLNSIDTLEQIYENSQEDVCIVERLFS 105
LAA+A S GTK + R+FS+ L + + V I +FS
Sbjct: 185 LAAIAFNSTGTKLASASEKGTVIRVFSIPDGQKLYEFRRGMKRYVNISSLVFS 237
|
May play a role in autophagy. Xenopus laevis (taxid: 8355) |
| >sp|A2RAG5|ATG18_ASPNC Autophagy-related protein 18 OS=Aspergillus niger (strain CBS 513.88 / FGSC A1513) GN=atg18 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 55/83 (66%), Gaps = 5/83 (6%)
Query: 67 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK 126
L+V T G+R+F+ D + YE + ++ I+E LFS+SLVA++ SPR+L + + K
Sbjct: 15 LAVATSKGFRIFT---TDPFAKSYETKEGNIAIIEMLFSTSLVALIL--SPRRLQITNTK 69
Query: 127 RGSEICNYSFSNTILAVKLNRKK 149
R S IC +F T+LAVKLNRK+
Sbjct: 70 RQSTICELTFPTTVLAVKLNRKR 92
|
Required for cytoplasm to vacuole transport (Cvt) vesicle formation, pexophagy and autophagy. Aspergillus niger (strain CBS 513.88 / FGSC A1513) (taxid: 425011) |
| >sp|Q1DKJ3|ATG18_COCIM Autophagy-related protein 18 OS=Coccidioides immitis (strain RS) GN=ATG18 PE=3 SV=1 | Back alignment and function description |
|---|
Score = 74.3 bits (181), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 56/83 (67%), Gaps = 5/83 (6%)
Query: 67 LSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK 126
L+VGT G+R+F+ D + YE + ++ I+E LFS+SLVAV+ SPR+L + + K
Sbjct: 15 LAVGTSKGFRIFT---TDPFGKSYETKEGNIAILEMLFSTSLVAVIL--SPRRLQIMNTK 69
Query: 127 RGSEICNYSFSNTILAVKLNRKK 149
R S IC +F T+LA++LNRK+
Sbjct: 70 RQSVICELTFPTTVLAIRLNRKR 92
|
Required for cytoplasm to vacuole transport (Cvt) vesicle formation, pexophagy and autophagy. Coccidioides immitis (strain RS) (taxid: 246410) |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 161 | ||||||
| 72014139 | 486 | PREDICTED: WD repeat domain phosphoinosi | 0.521 | 0.172 | 0.797 | 6e-33 | |
| 383861761 | 472 | PREDICTED: WD repeat domain phosphoinosi | 0.521 | 0.177 | 0.809 | 9e-33 | |
| 193613342 | 422 | PREDICTED: WD repeat domain phosphoinosi | 0.447 | 0.170 | 0.797 | 2e-32 | |
| 242005831 | 441 | WD repeat domain phosphoinositide-intera | 0.403 | 0.147 | 0.785 | 2e-32 | |
| 405974503 | 438 | WD repeat domain phosphoinositide-intera | 0.521 | 0.191 | 0.761 | 2e-32 | |
| 395845633 | 470 | PREDICTED: WD repeat domain phosphoinosi | 0.658 | 0.225 | 0.663 | 1e-31 | |
| 410984309 | 421 | PREDICTED: WD repeat domain phosphoinosi | 0.602 | 0.230 | 0.696 | 3e-31 | |
| 432870745 | 425 | PREDICTED: LOW QUALITY PROTEIN: WD repea | 0.521 | 0.197 | 0.776 | 3e-31 | |
| 344289650 | 425 | PREDICTED: WD repeat domain phosphoinosi | 0.521 | 0.197 | 0.776 | 4e-31 | |
| 307211145 | 378 | WD repeat domain phosphoinositide-intera | 0.490 | 0.208 | 0.773 | 4e-31 |
| >gi|72014139|ref|XP_781358.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein 2-like [Strongylocentrotus purpuratus] | Back alignment and taxonomy information |
|---|
Score = 145 bits (365), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 67/84 (79%), Positives = 78/84 (92%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125
SL+VGTK+ YRLFSL S+D LEQIYE+ ED+CIVERLFSSSLVAVVSL++PRKL VCHF
Sbjct: 25 SLAVGTKTSYRLFSLTSVDKLEQIYEHDSEDICIVERLFSSSLVAVVSLTAPRKLKVCHF 84
Query: 126 KRGSEICNYSFSNTILAVKLNRKK 149
K+G+EICNYS+SNTILAVKLNRK+
Sbjct: 85 KKGTEICNYSYSNTILAVKLNRKR 108
|
Source: Strongylocentrotus purpuratus Species: Strongylocentrotus purpuratus Genus: Strongylocentrotus Family: Strongylocentrotidae Order: Echinoida Class: Echinoidea Phylum: Echinodermata Superkingdom: Eukaryota |
| >gi|383861761|ref|XP_003706353.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein 2-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Score = 144 bits (364), Expect = 9e-33, Method: Compositional matrix adjust.
Identities = 68/84 (80%), Positives = 78/84 (92%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125
SL+VG+K+GY+LFSLNSID LE IYEN ED+CIVERLFSSSLVAVVSLSSPRKL VCHF
Sbjct: 47 SLAVGSKAGYKLFSLNSIDHLETIYENDTEDICIVERLFSSSLVAVVSLSSPRKLKVCHF 106
Query: 126 KRGSEICNYSFSNTILAVKLNRKK 149
++G+EICNYS+SNTILAVKLNR +
Sbjct: 107 RKGTEICNYSYSNTILAVKLNRAR 130
|
Source: Megachile rotundata Species: Megachile rotundata Genus: Megachile Family: Megachilidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193613342|ref|XP_001951577.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein 2-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 67/84 (79%), Positives = 78/84 (92%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125
SL+VGTK+GYRL+SL+S+D L+QIYEN ED+CIVERLFSSSLVAVVSLSSPRKL VCHF
Sbjct: 24 SLAVGTKTGYRLYSLSSVDNLDQIYENESEDICIVERLFSSSLVAVVSLSSPRKLRVCHF 83
Query: 126 KRGSEICNYSFSNTILAVKLNRKK 149
K+G+EICNYS+SNTIL VKLNR +
Sbjct: 84 KKGNEICNYSYSNTILGVKLNRAR 107
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|242005831|ref|XP_002423764.1| WD repeat domain phosphoinositide-interacting protein, putative [Pediculus humanus corporis] gi|212506966|gb|EEB11026.1| WD repeat domain phosphoinositide-interacting protein, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 144 bits (362), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 66/84 (78%), Positives = 78/84 (92%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125
SL+VGTK+GY+LFSL+S+D LEQIYEN ED+CIVERLFSSSLVA+VSLSSPRKL VCHF
Sbjct: 47 SLTVGTKTGYKLFSLHSVDLLEQIYENEAEDICIVERLFSSSLVAIVSLSSPRKLQVCHF 106
Query: 126 KRGSEICNYSFSNTILAVKLNRKK 149
++G+EIC YS+SNTILAVKLNR +
Sbjct: 107 RKGTEICKYSYSNTILAVKLNRTR 130
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|405974503|gb|EKC39143.1| WD repeat domain phosphoinositide-interacting protein 2 [Crassostrea gigas] | Back alignment and taxonomy information |
|---|
Score = 143 bits (361), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 64/84 (76%), Positives = 80/84 (95%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125
SL+VGT++GY+LFSL+S+D LEQIY+N ED+CIVERLFSSSLVA+VSLSSPRKL VCHF
Sbjct: 25 SLAVGTRTGYKLFSLSSVDKLEQIYDNESEDICIVERLFSSSLVAIVSLSSPRKLKVCHF 84
Query: 126 KRGSEICNYSFSNTILAVKLNRKK 149
K+G+EICNYS+SN+ILAV+LNR++
Sbjct: 85 KKGTEICNYSYSNSILAVRLNRQR 108
|
Source: Crassostrea gigas Species: Crassostrea gigas Genus: Crassostrea Family: Ostreidae Order: Ostreoida Class: Bivalvia Phylum: Mollusca Superkingdom: Eukaryota |
| >gi|395845633|ref|XP_003795531.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein 2 [Otolemur garnettii] | Back alignment and taxonomy information |
|---|
Score = 140 bits (354), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 73/110 (66%), Positives = 86/110 (78%), Gaps = 4/110 (3%)
Query: 43 FDADNLHAKTMIPAHDSP--LAALASLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCI 99
F+ DN K P P LA SL+VG+KSGY+ FSL+S+D LEQIYE EDVCI
Sbjct: 20 FNQDNTAVKRA-PRAAGPRHLAVSWSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCI 78
Query: 100 VERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149
VERLFSSSLVA+VSL +PRKL VCHFK+G+EICNYS+SNTILAVKLNR++
Sbjct: 79 VERLFSSSLVAIVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQR 128
|
Source: Otolemur garnettii Species: Otolemur garnettii Genus: Otolemur Family: Galagidae Order: Primates Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|410984309|ref|XP_003998472.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein 2 [Felis catus] | Back alignment and taxonomy information |
|---|
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 69/99 (69%), Positives = 83/99 (83%), Gaps = 2/99 (2%)
Query: 52 TMIPAHDSPLAALASLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVA 110
T PA P ++SL+VG+KSGY+ FSL+S+D LEQIYE EDVCIVERLFSSSLVA
Sbjct: 9 TFEPA-SGPHGIISSLAVGSKSGYKFFSLSSVDKLEQIYECTDTEDVCIVERLFSSSLVA 67
Query: 111 VVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149
+VSL +PRKL VCHFK+G+EICNYS+SNTILAVKLNR++
Sbjct: 68 IVSLKAPRKLKVCHFKKGTEICNYSYSNTILAVKLNRQR 106
|
Source: Felis catus Species: Felis catus Genus: Felis Family: Felidae Order: Carnivora Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|432870745|ref|XP_004071827.1| PREDICTED: LOW QUALITY PROTEIN: WD repeat domain phosphoinositide-interacting protein 2-like [Oryzias latipes] | Back alignment and taxonomy information |
|---|
Score = 139 bits (351), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 78/85 (91%), Gaps = 1/85 (1%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124
SL+VG+KSGY+ FSL+S+D LEQIYE N EDVCIVERLFSSSLVA+VSL +PRKL VCH
Sbjct: 26 SLAVGSKSGYKFFSLSSVDKLEQIYECNDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCH 85
Query: 125 FKRGSEICNYSFSNTILAVKLNRKK 149
FK+G+EICNYS+SNTILAVKLNR++
Sbjct: 86 FKKGTEICNYSYSNTILAVKLNRQR 110
|
Source: Oryzias latipes Species: Oryzias latipes Genus: Oryzias Family: Adrianichthyidae Order: Beloniformes Class: Actinopterygii Phylum: Chordata Superkingdom: Eukaryota |
| >gi|344289650|ref|XP_003416555.1| PREDICTED: WD repeat domain phosphoinositide-interacting protein 2 isoform 2 [Loxodonta africana] | Back alignment and taxonomy information |
|---|
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 66/85 (77%), Positives = 78/85 (91%), Gaps = 1/85 (1%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124
SL+VG+KSGY+ FSL+S+D LEQIYE N EDVCIVERLFSSSLVA+VSL +PRKL VCH
Sbjct: 26 SLAVGSKSGYKFFSLSSVDKLEQIYECNDTEDVCIVERLFSSSLVAIVSLKAPRKLKVCH 85
Query: 125 FKRGSEICNYSFSNTILAVKLNRKK 149
FK+G+EICNYS+SNTILAVKLNR++
Sbjct: 86 FKKGTEICNYSYSNTILAVKLNRQR 110
|
Source: Loxodonta africana Species: Loxodonta africana Genus: Loxodonta Family: Elephantidae Order: Proboscidea Class: Mammalia Phylum: Chordata Superkingdom: Eukaryota |
| >gi|307211145|gb|EFN87363.1| WD repeat domain phosphoinositide-interacting protein 2 [Harpegnathos saltator] | Back alignment and taxonomy information |
|---|
Score = 139 bits (350), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 65/84 (77%), Positives = 77/84 (91%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125
SL+VG+KSGY+LFS++S LE+IYEN ED+CIVERLFSSSLVAVVSLSSPR LTVCHF
Sbjct: 48 SLAVGSKSGYKLFSISSAGHLEKIYENDTEDICIVERLFSSSLVAVVSLSSPRTLTVCHF 107
Query: 126 KRGSEICNYSFSNTILAVKLNRKK 149
++G+EICNYS+SNTILAVKLNR +
Sbjct: 108 RKGTEICNYSYSNTILAVKLNRAQ 131
|
Source: Harpegnathos saltator Species: Harpegnathos saltator Genus: Harpegnathos Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 161 | ||||||
| MGI|MGI:1923831 | 445 | Wipi2 "WD repeat domain, phosp | 0.447 | 0.161 | 0.75 | 4.7e-25 | |
| UNIPROTKB|Q2KJ60 | 436 | WIPI2 "Uncharacterized protein | 0.447 | 0.165 | 0.736 | 5.2e-25 | |
| UNIPROTKB|Q7ZWU5 | 435 | wipi2 "WD repeat domain phosph | 0.447 | 0.165 | 0.736 | 8.9e-25 | |
| UNIPROTKB|Q5ZHN3 | 436 | WIPI2 "WD repeat domain phosph | 0.447 | 0.165 | 0.736 | 9.1e-25 | |
| UNIPROTKB|D7RA31 | 436 | WIPI2 "Uncharacterized protein | 0.447 | 0.165 | 0.736 | 9.1e-25 | |
| RGD|1359154 | 445 | Wipi2 "WD repeat domain, phosp | 0.447 | 0.161 | 0.736 | 1.1e-24 | |
| UNIPROTKB|Q9Y4P8 | 454 | WIPI2 "WD repeat domain phosph | 0.447 | 0.158 | 0.736 | 1.2e-24 | |
| ZFIN|ZDB-GENE-040718-488 | 431 | wipi2 "WD repeat domain, phosp | 0.447 | 0.167 | 0.722 | 1.4e-24 | |
| FB|FBgn0035850 | 377 | Atg18 "Autophagy-specific gene | 0.447 | 0.190 | 0.722 | 1.1e-23 | |
| ZFIN|ZDB-GENE-040426-1404 | 453 | wipi1 "WD repeat domain, phosp | 0.447 | 0.158 | 0.569 | 1.7e-18 |
| MGI|MGI:1923831 Wipi2 "WD repeat domain, phosphoinositide interacting 2" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 287 (106.1 bits), Expect = 4.7e-25, P = 4.7e-25
Identities = 54/72 (75%), Positives = 60/72 (83%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MKVLHTIR+TPPNP G+C L +N+DNCYLAYPGS SIGEVQ+FD NL A MIPAHDSP
Sbjct: 127 MKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSASIGEVQVFDTINLRAANMIPAHDSP 186
Query: 61 LAALASLSVGTK 72
LAALA + GTK
Sbjct: 187 LAALAFDASGTK 198
|
|
| UNIPROTKB|Q2KJ60 WIPI2 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 286 (105.7 bits), Expect = 5.2e-25, P = 5.2e-25
Identities = 53/72 (73%), Positives = 60/72 (83%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MKVLHTIR+TPPNP G+C L +N+DNCYLAYPGS +IGEVQ+FD NL A MIPAHDSP
Sbjct: 127 MKVLHTIRETPPNPTGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMIPAHDSP 186
Query: 61 LAALASLSVGTK 72
LAALA + GTK
Sbjct: 187 LAALAFDASGTK 198
|
|
| UNIPROTKB|Q7ZWU5 wipi2 "WD repeat domain phosphoinositide-interacting protein 2" [Xenopus laevis (taxid:8355)] | Back alignment and assigned GO terms |
|---|
Score = 284 (105.0 bits), Expect = 8.9e-25, P = 8.9e-25
Identities = 53/72 (73%), Positives = 60/72 (83%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MKVLHTIR+TPPNP+G+C L +N +NCYLAYPGS SIGEVQ+FD NL A MIPAHDSP
Sbjct: 127 MKVLHTIRETPPNPSGLCSLSINGENCYLAYPGSASIGEVQVFDTVNLRAANMIPAHDSP 186
Query: 61 LAALASLSVGTK 72
LAALA + GTK
Sbjct: 187 LAALAFDASGTK 198
|
|
| UNIPROTKB|Q5ZHN3 WIPI2 "WD repeat domain phosphoinositide-interacting protein 2" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 284 (105.0 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 53/72 (73%), Positives = 60/72 (83%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MKVLHTIR+TPPNP G+C L +N+DNCYLAYPGS +IGEVQ+FD NL A MIPAHDSP
Sbjct: 127 MKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMIPAHDSP 186
Query: 61 LAALASLSVGTK 72
LAALA + GTK
Sbjct: 187 LAALAFDASGTK 198
|
|
| UNIPROTKB|D7RA31 WIPI2 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 284 (105.0 bits), Expect = 9.1e-25, P = 9.1e-25
Identities = 53/72 (73%), Positives = 60/72 (83%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MKVLHTIR+TPPNP G+C L +N+DNCYLAYPGS +IGEVQ+FD NL A MIPAHDSP
Sbjct: 127 MKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMIPAHDSP 186
Query: 61 LAALASLSVGTK 72
LAALA + GTK
Sbjct: 187 LAALAFDASGTK 198
|
|
| RGD|1359154 Wipi2 "WD repeat domain, phosphoinositide interacting 2" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
Score = 284 (105.0 bits), Expect = 1.1e-24, P = 1.1e-24
Identities = 53/72 (73%), Positives = 60/72 (83%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MKVLHTIR+TPPNP G+C L +N+DNCYLAYPGS +IGEVQ+FD NL A MIPAHDSP
Sbjct: 127 MKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMIPAHDSP 186
Query: 61 LAALASLSVGTK 72
LAALA + GTK
Sbjct: 187 LAALAFDASGTK 198
|
|
| UNIPROTKB|Q9Y4P8 WIPI2 "WD repeat domain phosphoinositide-interacting protein 2" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 284 (105.0 bits), Expect = 1.2e-24, P = 1.2e-24
Identities = 53/72 (73%), Positives = 60/72 (83%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MKVLHTIR+TPPNP G+C L +N+DNCYLAYPGS +IGEVQ+FD NL A MIPAHDSP
Sbjct: 145 MKVLHTIRETPPNPAGLCALSINNDNCYLAYPGSATIGEVQVFDTINLRAANMIPAHDSP 204
Query: 61 LAALASLSVGTK 72
LAALA + GTK
Sbjct: 205 LAALAFDASGTK 216
|
|
| ZFIN|ZDB-GENE-040718-488 wipi2 "WD repeat domain, phosphoinositide interacting 2" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 282 (104.3 bits), Expect = 1.4e-24, P = 1.4e-24
Identities = 52/72 (72%), Positives = 61/72 (84%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MKVLHTIR+TPPNP+G+C L +++DNCYLAYPGS +IGEVQ+FD NL A MIPAHDSP
Sbjct: 127 MKVLHTIRETPPNPSGLCALSISNDNCYLAYPGSATIGEVQVFDTVNLRAANMIPAHDSP 186
Query: 61 LAALASLSVGTK 72
LAALA + GTK
Sbjct: 187 LAALAFDASGTK 198
|
|
| FB|FBgn0035850 Atg18 "Autophagy-specific gene 18" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 272 (100.8 bits), Expect = 1.1e-23, P = 1.1e-23
Identities = 52/72 (72%), Positives = 60/72 (83%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MKV+HTIRDTP NP G+C L +S++CYLAYPGS + GEVQIFDA NLHAKTMIPAHD+P
Sbjct: 126 MKVVHTIRDTPCNPQGLCALSSSSEHCYLAYPGSVTAGEVQIFDAINLHAKTMIPAHDTP 185
Query: 61 LAALASLSVGTK 72
LAALA GT+
Sbjct: 186 LAALAFSPSGTE 197
|
|
| ZFIN|ZDB-GENE-040426-1404 wipi1 "WD repeat domain, phosphoinositide interacting 1" [Danio rerio (taxid:7955)] | Back alignment and assigned GO terms |
|---|
Score = 229 (85.7 bits), Expect = 1.7e-18, P = 1.7e-18
Identities = 41/72 (56%), Positives = 56/72 (77%)
Query: 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP 60
MK+L T+ +TP NP+G+C L +N N +LAYPGS++IGE+ ++DA+NL TMIPAHDSP
Sbjct: 131 MKLLKTLLNTPSNPSGLCALSINHSNSFLAYPGSDTIGEIIVYDANNLSTVTMIPAHDSP 190
Query: 61 LAALASLSVGTK 72
LAA+ + GTK
Sbjct: 191 LAAITFSASGTK 202
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q9Y4P8 | WIPI2_HUMAN | No assigned EC number | 0.6513 | 0.6645 | 0.2356 | yes | N/A |
| Q6AY57 | WIPI2_RAT | No assigned EC number | 0.7647 | 0.5217 | 0.1887 | yes | N/A |
| Q5ZHN3 | WIPI2_CHICK | No assigned EC number | 0.7647 | 0.5217 | 0.1926 | yes | N/A |
| Q80W47 | WIPI2_MOUSE | No assigned EC number | 0.7647 | 0.5217 | 0.1887 | yes | N/A |
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
No hit with e-value below 0.005
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 161 | |||
| KOG0272|consensus | 459 | 99.93 | ||
| KOG0271|consensus | 480 | 99.91 | ||
| KOG2110|consensus | 391 | 99.9 | ||
| KOG0279|consensus | 315 | 99.9 | ||
| KOG0263|consensus | 707 | 99.9 | ||
| KOG0286|consensus | 343 | 99.89 | ||
| KOG0291|consensus | 893 | 99.89 | ||
| KOG0263|consensus | 707 | 99.89 | ||
| KOG0266|consensus | 456 | 99.89 | ||
| KOG0295|consensus | 406 | 99.89 | ||
| KOG0272|consensus | 459 | 99.87 | ||
| KOG0271|consensus | 480 | 99.87 | ||
| KOG0284|consensus | 464 | 99.86 | ||
| KOG0273|consensus | 524 | 99.85 | ||
| KOG2111|consensus | 346 | 99.85 | ||
| KOG0266|consensus | 456 | 99.84 | ||
| PTZ00421 | 493 | coronin; Provisional | 99.83 | |
| KOG0319|consensus | 775 | 99.83 | ||
| KOG0279|consensus | 315 | 99.82 | ||
| KOG0295|consensus | 406 | 99.82 | ||
| KOG0276|consensus | 794 | 99.82 | ||
| KOG0286|consensus | 343 | 99.82 | ||
| KOG0285|consensus | 460 | 99.82 | ||
| KOG0276|consensus | 794 | 99.81 | ||
| KOG0285|consensus | 460 | 99.81 | ||
| KOG0647|consensus | 347 | 99.8 | ||
| KOG0316|consensus | 307 | 99.8 | ||
| KOG0275|consensus | 508 | 99.8 | ||
| PTZ00420 | 568 | coronin; Provisional | 99.79 | |
| KOG0273|consensus | 524 | 99.78 | ||
| KOG0281|consensus | 499 | 99.78 | ||
| KOG0265|consensus | 338 | 99.78 | ||
| KOG0281|consensus | 499 | 99.78 | ||
| KOG0283|consensus | 712 | 99.78 | ||
| KOG0315|consensus | 311 | 99.78 | ||
| KOG0645|consensus | 312 | 99.77 | ||
| KOG0292|consensus | 1202 | 99.77 | ||
| KOG0315|consensus | 311 | 99.77 | ||
| KOG0292|consensus | 1202 | 99.77 | ||
| KOG0282|consensus | 503 | 99.77 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.77 | |
| KOG0284|consensus | 464 | 99.76 | ||
| KOG0274|consensus | 537 | 99.76 | ||
| KOG0319|consensus | 775 | 99.75 | ||
| KOG0274|consensus | 537 | 99.75 | ||
| cd00200 | 289 | WD40 WD40 domain, found in a number of eukaryotic | 99.74 | |
| PTZ00421 | 493 | coronin; Provisional | 99.73 | |
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.73 | |
| KOG0310|consensus | 487 | 99.73 | ||
| KOG0308|consensus | 735 | 99.73 | ||
| KOG0310|consensus | 487 | 99.73 | ||
| KOG0275|consensus | 508 | 99.73 | ||
| KOG0291|consensus | 893 | 99.72 | ||
| KOG0313|consensus | 423 | 99.72 | ||
| KOG0267|consensus | 825 | 99.72 | ||
| PLN00181 | 793 | protein SPA1-RELATED; Provisional | 99.72 | |
| PTZ00420 | 568 | coronin; Provisional | 99.71 | |
| KOG0302|consensus | 440 | 99.71 | ||
| KOG0277|consensus | 311 | 99.7 | ||
| KOG0265|consensus | 338 | 99.7 | ||
| KOG0294|consensus | 362 | 99.69 | ||
| KOG0316|consensus | 307 | 99.69 | ||
| KOG0289|consensus | 506 | 99.69 | ||
| KOG0646|consensus | 476 | 99.69 | ||
| KOG0305|consensus | 484 | 99.69 | ||
| KOG0268|consensus | 433 | 99.68 | ||
| KOG0277|consensus | 311 | 99.68 | ||
| KOG0300|consensus | 481 | 99.67 | ||
| KOG0264|consensus | 422 | 99.67 | ||
| KOG0301|consensus | 745 | 99.67 | ||
| KOG0269|consensus | 839 | 99.67 | ||
| KOG0306|consensus | 888 | 99.66 | ||
| KOG0641|consensus | 350 | 99.65 | ||
| KOG0289|consensus | 506 | 99.65 | ||
| KOG0305|consensus | 484 | 99.65 | ||
| KOG0643|consensus | 327 | 99.65 | ||
| KOG0267|consensus | 825 | 99.65 | ||
| KOG0313|consensus | 423 | 99.64 | ||
| KOG0302|consensus | 440 | 99.64 | ||
| KOG0264|consensus | 422 | 99.63 | ||
| KOG0645|consensus | 312 | 99.63 | ||
| KOG1036|consensus | 323 | 99.63 | ||
| KOG0973|consensus | 942 | 99.62 | ||
| KOG0299|consensus | 479 | 99.62 | ||
| KOG1446|consensus | 311 | 99.62 | ||
| KOG0646|consensus | 476 | 99.6 | ||
| KOG0649|consensus | 325 | 99.59 | ||
| KOG0282|consensus | 503 | 99.59 | ||
| KOG0640|consensus | 430 | 99.59 | ||
| KOG0278|consensus | 334 | 99.58 | ||
| KOG0301|consensus | 745 | 99.57 | ||
| KOG1539|consensus | 910 | 99.55 | ||
| KOG0293|consensus | 519 | 99.55 | ||
| KOG0643|consensus | 327 | 99.55 | ||
| KOG1446|consensus | 311 | 99.54 | ||
| KOG0308|consensus | 735 | 99.54 | ||
| KOG2110|consensus | 391 | 99.54 | ||
| KOG0973|consensus | 942 | 99.53 | ||
| KOG0296|consensus | 399 | 99.53 | ||
| KOG0283|consensus | 712 | 99.53 | ||
| KOG0278|consensus | 334 | 99.53 | ||
| KOG1034|consensus | 385 | 99.53 | ||
| KOG0306|consensus | 888 | 99.52 | ||
| KOG1408|consensus | 1080 | 99.52 | ||
| KOG0772|consensus | 641 | 99.52 | ||
| KOG0293|consensus | 519 | 99.51 | ||
| KOG0288|consensus | 459 | 99.51 | ||
| KOG0640|consensus | 430 | 99.51 | ||
| KOG0270|consensus | 463 | 99.51 | ||
| KOG1332|consensus | 299 | 99.5 | ||
| KOG0318|consensus | 603 | 99.5 | ||
| KOG0318|consensus | 603 | 99.5 | ||
| KOG2111|consensus | 346 | 99.49 | ||
| KOG0269|consensus | 839 | 99.49 | ||
| KOG0296|consensus | 399 | 99.49 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.49 | |
| KOG1009|consensus | 434 | 99.47 | ||
| KOG0303|consensus | 472 | 99.47 | ||
| KOG0647|consensus | 347 | 99.45 | ||
| KOG1407|consensus | 313 | 99.44 | ||
| KOG1332|consensus | 299 | 99.44 | ||
| KOG1273|consensus | 405 | 99.44 | ||
| KOG1407|consensus | 313 | 99.41 | ||
| KOG1007|consensus | 370 | 99.41 | ||
| TIGR03866 | 300 | PQQ_ABC_repeats PQQ-dependent catabolism-associate | 99.4 | |
| KOG0639|consensus | 705 | 99.39 | ||
| KOG1007|consensus | 370 | 99.37 | ||
| KOG0644|consensus | 1113 | 99.37 | ||
| KOG4378|consensus | 673 | 99.37 | ||
| KOG0639|consensus | 705 | 99.36 | ||
| KOG0288|consensus | 459 | 99.36 | ||
| KOG1445|consensus | 1012 | 99.35 | ||
| KOG0300|consensus | 481 | 99.35 | ||
| KOG1036|consensus | 323 | 99.35 | ||
| KOG0641|consensus | 350 | 99.33 | ||
| KOG0649|consensus | 325 | 99.33 | ||
| KOG0642|consensus | 577 | 99.33 | ||
| KOG4283|consensus | 397 | 99.32 | ||
| KOG0294|consensus | 362 | 99.32 | ||
| KOG2048|consensus | 691 | 99.32 | ||
| KOG1274|consensus | 933 | 99.32 | ||
| KOG0299|consensus | 479 | 99.32 | ||
| KOG4283|consensus | 397 | 99.32 | ||
| KOG1188|consensus | 376 | 99.31 | ||
| KOG0771|consensus | 398 | 99.31 | ||
| KOG0321|consensus | 720 | 99.3 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.3 | |
| KOG1273|consensus | 405 | 99.28 | ||
| KOG1274|consensus | 933 | 99.26 | ||
| KOG2096|consensus | 420 | 99.25 | ||
| KOG0290|consensus | 364 | 99.24 | ||
| KOG0270|consensus | 463 | 99.24 | ||
| KOG0303|consensus | 472 | 99.23 | ||
| KOG2445|consensus | 361 | 99.22 | ||
| KOG2919|consensus | 406 | 99.22 | ||
| KOG4378|consensus | 673 | 99.21 | ||
| KOG1034|consensus | 385 | 99.2 | ||
| KOG2055|consensus | 514 | 99.2 | ||
| KOG4328|consensus | 498 | 99.2 | ||
| KOG2096|consensus | 420 | 99.2 | ||
| KOG2048|consensus | 691 | 99.2 | ||
| KOG0772|consensus | 641 | 99.19 | ||
| KOG1188|consensus | 376 | 99.18 | ||
| KOG0322|consensus | 323 | 99.17 | ||
| KOG4328|consensus | 498 | 99.16 | ||
| KOG1408|consensus | 1080 | 99.15 | ||
| KOG0307|consensus | 1049 | 99.14 | ||
| KOG1445|consensus | 1012 | 99.13 | ||
| KOG0642|consensus | 577 | 99.1 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 99.1 | |
| KOG0268|consensus | 433 | 99.1 | ||
| KOG0307|consensus | 1049 | 99.1 | ||
| KOG1538|consensus | 1081 | 99.08 | ||
| COG2319 | 466 | FOG: WD40 repeat [General function prediction only | 99.07 | |
| KOG1272|consensus | 545 | 99.06 | ||
| KOG2321|consensus | 703 | 99.06 | ||
| KOG1539|consensus | 910 | 99.01 | ||
| KOG1063|consensus | 764 | 99.01 | ||
| KOG1009|consensus | 434 | 98.97 | ||
| KOG1063|consensus | 764 | 98.92 | ||
| PF08662 | 194 | eIF2A: Eukaryotic translation initiation factor eI | 98.92 | |
| KOG2394|consensus | 636 | 98.91 | ||
| KOG0321|consensus | 720 | 98.89 | ||
| KOG0974|consensus | 967 | 98.88 | ||
| KOG1310|consensus | 758 | 98.87 | ||
| KOG0650|consensus | 733 | 98.87 | ||
| KOG2055|consensus | 514 | 98.85 | ||
| KOG1517|consensus | 1387 | 98.83 | ||
| KOG4227|consensus | 609 | 98.82 | ||
| KOG0290|consensus | 364 | 98.79 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 98.79 | |
| KOG2394|consensus | 636 | 98.76 | ||
| KOG2106|consensus | 626 | 98.76 | ||
| KOG3881|consensus | 412 | 98.75 | ||
| KOG0322|consensus | 323 | 98.73 | ||
| KOG0644|consensus | 1113 | 98.72 | ||
| KOG1524|consensus | 737 | 98.71 | ||
| KOG2106|consensus | 626 | 98.7 | ||
| KOG2695|consensus | 425 | 98.68 | ||
| KOG2445|consensus | 361 | 98.67 | ||
| KOG3914|consensus | 390 | 98.66 | ||
| KOG0650|consensus | 733 | 98.66 | ||
| KOG1272|consensus | 545 | 98.65 | ||
| KOG1310|consensus | 758 | 98.64 | ||
| KOG1538|consensus | 1081 | 98.61 | ||
| KOG1587|consensus | 555 | 98.59 | ||
| KOG2321|consensus | 703 | 98.58 | ||
| PRK11028 | 330 | 6-phosphogluconolactonase; Provisional | 98.58 | |
| KOG2919|consensus | 406 | 98.54 | ||
| KOG0974|consensus | 967 | 98.54 | ||
| KOG4547|consensus | 541 | 98.53 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.53 | |
| KOG0771|consensus | 398 | 98.52 | ||
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 98.51 | |
| KOG1963|consensus | 792 | 98.49 | ||
| KOG1524|consensus | 737 | 98.48 | ||
| KOG2139|consensus | 445 | 98.48 | ||
| PF00400 | 39 | WD40: WD domain, G-beta repeat; InterPro: IPR01978 | 98.43 | |
| KOG4547|consensus | 541 | 98.43 | ||
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 98.43 | |
| PRK01742 | 429 | tolB translocation protein TolB; Provisional | 98.42 | |
| KOG1517|consensus | 1387 | 98.37 | ||
| KOG4227|consensus | 609 | 98.36 | ||
| KOG1240|consensus | 1431 | 98.36 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.36 | |
| KOG1645|consensus | 463 | 98.33 | ||
| KOG3881|consensus | 412 | 98.33 | ||
| KOG0280|consensus | 339 | 98.29 | ||
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 98.28 | |
| KOG4190|consensus | 1034 | 98.26 | ||
| KOG1409|consensus | 404 | 98.26 | ||
| KOG1523|consensus | 361 | 98.25 | ||
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 98.25 | |
| PRK03629 | 429 | tolB translocation protein TolB; Provisional | 98.23 | |
| PRK04922 | 433 | tolB translocation protein TolB; Provisional | 98.22 | |
| KOG1587|consensus | 555 | 98.21 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 98.16 | |
| KOG4714|consensus | 319 | 98.15 | ||
| PF02239 | 369 | Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO | 98.12 | |
| KOG1912|consensus | 1062 | 98.12 | ||
| KOG1963|consensus | 792 | 98.1 | ||
| KOG2139|consensus | 445 | 98.09 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 98.09 | |
| KOG3914|consensus | 390 | 98.03 | ||
| KOG4497|consensus | 447 | 98.01 | ||
| PRK02889 | 427 | tolB translocation protein TolB; Provisional | 98.01 | |
| PRK05137 | 435 | tolB translocation protein TolB; Provisional | 97.93 | |
| KOG2695|consensus | 425 | 97.93 | ||
| KOG1523|consensus | 361 | 97.92 | ||
| KOG1832|consensus | 1516 | 97.88 | ||
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 97.84 | |
| KOG4714|consensus | 319 | 97.83 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 97.82 | |
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 97.81 | |
| KOG1334|consensus | 559 | 97.8 | ||
| TIGR02800 | 417 | propeller_TolB tol-pal system beta propeller repea | 97.8 | |
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.78 | |
| PRK01029 | 428 | tolB translocation protein TolB; Provisional | 97.74 | |
| KOG1064|consensus | 2439 | 97.73 | ||
| PLN02919 | 1057 | haloacid dehalogenase-like hydrolase family protei | 97.67 | |
| KOG0280|consensus | 339 | 97.67 | ||
| PRK00178 | 430 | tolB translocation protein TolB; Provisional | 97.65 | |
| KOG4532|consensus | 344 | 97.62 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 97.6 | |
| KOG1354|consensus | 433 | 97.59 | ||
| KOG1334|consensus | 559 | 97.58 | ||
| KOG1275|consensus | 1118 | 97.53 | ||
| KOG2315|consensus | 566 | 97.5 | ||
| KOG1240|consensus | 1431 | 97.49 | ||
| PRK04792 | 448 | tolB translocation protein TolB; Provisional | 97.46 | |
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 97.42 | |
| KOG2041|consensus | 1189 | 97.38 | ||
| KOG0309|consensus | 1081 | 97.38 | ||
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 97.37 | |
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.34 | |
| KOG4532|consensus | 344 | 97.32 | ||
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 97.3 | |
| KOG1064|consensus | 2439 | 97.3 | ||
| TIGR03300 | 377 | assembly_YfgL outer membrane assembly lipoprotein | 97.14 | |
| KOG4497|consensus | 447 | 97.07 | ||
| KOG2315|consensus | 566 | 97.06 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 97.06 | |
| KOG3621|consensus | 726 | 97.06 | ||
| PF11768 | 545 | DUF3312: Protein of unknown function (DUF3312); In | 97.01 | |
| PF13360 | 238 | PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A | 96.97 | |
| smart00320 | 40 | WD40 WD40 repeats. Note that these repeats are per | 96.96 | |
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 96.83 | |
| KOG2114|consensus | 933 | 96.82 | ||
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 96.76 | |
| KOG4190|consensus | 1034 | 96.74 | ||
| TIGR02658 | 352 | TTQ_MADH_Hv methylamine dehydrogenase heavy chain. | 96.73 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 96.71 | |
| KOG1409|consensus | 404 | 96.64 | ||
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 96.63 | |
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 96.53 | |
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 96.51 | |
| KOG2079|consensus | 1206 | 96.49 | ||
| KOG1354|consensus | 433 | 96.48 | ||
| KOG1912|consensus | 1062 | 96.47 | ||
| KOG2066|consensus | 846 | 96.45 | ||
| KOG2444|consensus | 238 | 96.3 | ||
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 96.3 | |
| KOG2066|consensus | 846 | 96.22 | ||
| KOG1275|consensus | 1118 | 96.18 | ||
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 96.12 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 96.11 | |
| KOG4640|consensus | 665 | 96.0 | ||
| KOG2079|consensus | 1206 | 95.99 | ||
| COG4946 | 668 | Uncharacterized protein related to the periplasmic | 95.97 | |
| PF08450 | 246 | SGL: SMP-30/Gluconolaconase/LRE-like region; Inter | 95.86 | |
| KOG0309|consensus | 1081 | 95.84 | ||
| KOG2314|consensus | 698 | 95.76 | ||
| PRK04043 | 419 | tolB translocation protein TolB; Provisional | 95.62 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 95.55 | |
| COG5170 | 460 | CDC55 Serine/threonine protein phosphatase 2A, reg | 95.23 | |
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 95.1 | |
| PF10282 | 345 | Lactonase: Lactonase, 7-bladed beta-propeller; Int | 95.08 | |
| KOG2314|consensus | 698 | 95.03 | ||
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 94.96 | |
| PF15492 | 282 | Nbas_N: Neuroblastoma-amplified sequence, N termin | 94.87 | |
| PF08553 | 794 | VID27: VID27 cytoplasmic protein; InterPro: IPR013 | 94.85 | |
| KOG1645|consensus | 463 | 94.76 | ||
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 94.73 | |
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 94.67 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 94.59 | |
| KOG0882|consensus | 558 | 94.52 | ||
| PF02897 | 414 | Peptidase_S9_N: Prolyl oligopeptidase, N-terminal | 94.5 | |
| KOG0882|consensus | 558 | 94.12 | ||
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 93.96 | |
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 93.88 | |
| KOG2041|consensus | 1189 | 93.86 | ||
| PF05694 | 461 | SBP56: 56kDa selenium binding protein (SBP56); Int | 93.78 | |
| PF14783 | 111 | BBS2_Mid: Ciliary BBSome complex subunit 2, middle | 93.76 | |
| KOG4640|consensus | 665 | 93.56 | ||
| PF04762 | 928 | IKI3: IKI3 family; InterPro: IPR006849 Members of | 92.9 | |
| KOG2114|consensus | 933 | 92.8 | ||
| PF14655 | 415 | RAB3GAP2_N: Rab3 GTPase-activating protein regulat | 92.67 | |
| COG5354 | 561 | Uncharacterized protein, contains Trp-Asp (WD) rep | 92.51 | |
| KOG1008|consensus | 783 | 92.26 | ||
| KOG4649|consensus | 354 | 92.15 | ||
| PF03178 | 321 | CPSF_A: CPSF A subunit region; InterPro: IPR004871 | 92.0 | |
| PRK11138 | 394 | outer membrane biogenesis protein BamB; Provisiona | 91.88 | |
| PF07433 | 305 | DUF1513: Protein of unknown function (DUF1513); In | 91.55 | |
| KOG3617|consensus | 1416 | 91.45 | ||
| PF04053 | 443 | Coatomer_WDAD: Coatomer WD associated region ; Int | 91.29 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 91.26 | |
| KOG1832|consensus | 1516 | 90.85 | ||
| COG2706 | 346 | 3-carboxymuconate cyclase [Carbohydrate transport | 90.09 | |
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 89.26 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 88.96 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 88.9 | |
| KOG3617|consensus | 1416 | 88.21 | ||
| PF10647 | 253 | Gmad1: Lipoprotein LpqB beta-propeller domain; Int | 87.75 | |
| PF08596 | 395 | Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; | 87.61 | |
| TIGR02276 | 42 | beta_rpt_yvtn 40-residue YVTN family beta-propelle | 87.55 | |
| cd00216 | 488 | PQQ_DH Dehydrogenases with pyrrolo-quinoline quino | 87.55 | |
| PRK02888 | 635 | nitrous-oxide reductase; Validated | 87.29 | |
| PF00780 | 275 | CNH: CNH domain; InterPro: IPR001180 Based on sequ | 87.07 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 86.77 | |
| PF10313 | 43 | DUF2415: Uncharacterised protein domain (DUF2415); | 86.74 | |
| PF10168 | 717 | Nup88: Nuclear pore component; InterPro: IPR019321 | 86.46 | |
| KOG2444|consensus | 238 | 86.32 | ||
| PF11715 | 547 | Nup160: Nucleoporin Nup120/160; InterPro: IPR02171 | 86.28 | |
| KOG2395|consensus | 644 | 86.06 | ||
| PF14781 | 136 | BBS2_N: Ciliary BBSome complex subunit 2, N-termin | 85.83 | |
| KOG3621|consensus | 726 | 85.6 | ||
| PF12894 | 47 | Apc4_WD40: Anaphase-promoting complex subunit 4 WD | 85.5 | |
| PF07676 | 39 | PD40: WD40-like Beta Propeller Repeat; InterPro: I | 84.66 | |
| KOG4460|consensus | 741 | 84.48 | ||
| PF07569 | 219 | Hira: TUP1-like enhancer of split; InterPro: IPR01 | 83.69 | |
| PF14583 | 386 | Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C | 83.4 | |
| PF12234 | 631 | Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR0 | 82.95 | |
| COG0823 | 425 | TolB Periplasmic component of the Tol biopolymer t | 82.89 | |
| PF06433 | 342 | Me-amine-dh_H: Methylamine dehydrogenase heavy cha | 82.1 | |
| TIGR03075 | 527 | PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methan | 81.41 | |
| COG3391 | 381 | Uncharacterized conserved protein [Function unknow | 80.93 |
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=9.2e-26 Score=182.04 Aligned_cols=140 Identities=14% Similarity=0.140 Sum_probs=125.4
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
|+..|..++|||+|.+|++++. |.+-|+||+++++.+...+||..+|.+++ +++||+.|. -||||+++|++
T Consensus 260 H~~RVs~VafHPsG~~L~Tasf--D~tWRlWD~~tk~ElL~QEGHs~~v~~iaf~~DGSL~~tGGlD~~~RvWDlRtgr~ 337 (459)
T KOG0272|consen 260 HLARVSRVAFHPSGKFLGTASF--DSTWRLWDLETKSELLLQEGHSKGVFSIAFQPDGSLAATGGLDSLGRVWDLRTGRC 337 (459)
T ss_pred chhhheeeeecCCCceeeeccc--ccchhhcccccchhhHhhcccccccceeEecCCCceeeccCccchhheeecccCcE
Confidence 4456889999999999999765 99999999999999999999999999999 899999999 99999999997
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc---EEEEEeccc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK---KEEEEDEEE 157 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~---~~vv~~~~~ 157 (161)
+ .++.||.. .|.+++|+|||..+++|++|++++|||++..+++..+. |.+-|..|+|+|+ .|+.+--|.
T Consensus 338 i-m~L~gH~k--~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r~~ly~ipAH~nlVS~Vk~~p~~g~fL~TasyD~ 410 (459)
T KOG0272|consen 338 I-MFLAGHIK--EILSVAFSPNGYHLATGSSDNTCKVWDLRMRSELYTIPAHSNLVSQVKYSPQEGYFLVTASYDN 410 (459)
T ss_pred E-EEeccccc--ceeeEeECCCceEEeecCCCCcEEEeeecccccceecccccchhhheEecccCCeEEEEcccCc
Confidence 7 78899975 48899999999999999999999999999999988775 7899999999994 666665543
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=4.6e-24 Score=171.01 Aligned_cols=135 Identities=13% Similarity=0.180 Sum_probs=121.1
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
|...|.+++|+|+|..||+++. |.++|+||+.+..+..+.++|.+.|-|++ .||||+.|| |++||..+|++
T Consensus 114 H~e~Vl~~~fsp~g~~l~tGsG--D~TvR~WD~~TeTp~~t~KgH~~WVlcvawsPDgk~iASG~~dg~I~lwdpktg~~ 191 (480)
T KOG0271|consen 114 HGEAVLSVQFSPTGSRLVTGSG--DTTVRLWDLDTETPLFTCKGHKNWVLCVAWSPDGKKIASGSKDGSIRLWDPKTGQQ 191 (480)
T ss_pred CCCcEEEEEecCCCceEEecCC--CceEEeeccCCCCcceeecCCccEEEEEEECCCcchhhccccCCeEEEecCCCCCc
Confidence 4445899999999999999766 99999999999999999999999999999 999999999 99999999999
Q ss_pred eeeEEeecCcceEEEEEeecC-----CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEE
Q psy505 86 LEQIYENSQEDVCIVERLFSS-----SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEE 151 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~-----~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~v 151 (161)
+.+.++||.. +|.+++|.| ....++|++.|++++|||+..++|+..+. |..+|.+|++-.++++
T Consensus 192 ~g~~l~gH~K--~It~Lawep~hl~p~~r~las~skDg~vrIWd~~~~~~~~~lsgHT~~VTCvrwGG~gli 261 (480)
T KOG0271|consen 192 IGRALRGHKK--WITALAWEPLHLVPPCRRLASSSKDGSVRIWDTKLGTCVRTLSGHTASVTCVRWGGEGLI 261 (480)
T ss_pred ccccccCccc--ceeEEeecccccCCCccceecccCCCCEEEEEccCceEEEEeccCccceEEEEEcCCceE
Confidence 8889999964 688888864 66789999999999999999999998876 7899999999866443
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=5.9e-23 Score=163.69 Aligned_cols=127 Identities=39% Similarity=0.654 Sum_probs=116.9
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG 74 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg 74 (161)
||+||||..+++|+.|++++++|+++.++|++++.+.|.|.|||+.+-+++.+|.+|++++.+++ +||+||++|
T Consensus 116 MklLhTI~t~~~n~~gl~AlS~n~~n~ylAyp~s~t~GdV~l~d~~nl~~v~~I~aH~~~lAalafs~~G~llATASeKG 195 (391)
T KOG2110|consen 116 MKLLHTIETTPPNPKGLCALSPNNANCYLAYPGSTTSGDVVLFDTINLQPVNTINAHKGPLAALAFSPDGTLLATASEKG 195 (391)
T ss_pred ceeehhhhccCCCccceEeeccCCCCceEEecCCCCCceEEEEEcccceeeeEEEecCCceeEEEECCCCCEEEEeccCc
Confidence 89999994444899999999999999999999998789999999999999999999999999999 999999999
Q ss_pred --eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC
Q psy505 75 --YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG 128 (161)
Q Consensus 75 --iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~ 128 (161)
||+|.+.+|+.+.+++||-. .+.+.+++|+|+...++..++.+||+|+-+++.
T Consensus 196 TVIRVf~v~~G~kl~eFRRG~~-~~~IySL~Fs~ds~~L~~sS~TeTVHiFKL~~~ 250 (391)
T KOG2110|consen 196 TVIRVFSVPEGQKLYEFRRGTY-PVSIYSLSFSPDSQFLAASSNTETVHIFKLEKV 250 (391)
T ss_pred eEEEEEEcCCccEeeeeeCCce-eeEEEEEEECCCCCeEEEecCCCeEEEEEeccc
Confidence 99999999999999988876 788999999999888887778889999987754
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.7e-22 Score=156.38 Aligned_cols=143 Identities=8% Similarity=0.098 Sum_probs=118.9
Q ss_pred eEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------------------
Q psy505 4 LHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------------------ 65 (161)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------------------ 65 (161)
+.-+ .+|+|. |..+..++||.+..+++. ||++|+||+.++++.+.|.||...|.+++
T Consensus 56 ~r~~-~GHsH~--v~dv~~s~dg~~alS~sw--D~~lrlWDl~~g~~t~~f~GH~~dVlsva~s~dn~qivSGSrDkTik 130 (315)
T KOG0279|consen 56 VRRL-TGHSHF--VSDVVLSSDGNFALSASW--DGTLRLWDLATGESTRRFVGHTKDVLSVAFSTDNRQIVSGSRDKTIK 130 (315)
T ss_pred eeee-eccceE--ecceEEccCCceEEeccc--cceEEEEEecCCcEEEEEEecCCceEEEEecCCCceeecCCCcceee
Confidence 4455 566665 444555679988887666 99999999999999999999998887666
Q ss_pred ---------------------------------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEE
Q psy505 66 ---------------------------------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAV 111 (161)
Q Consensus 66 ---------------------------------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~ 111 (161)
+++++|.|+ +|+||+++.+ +...+-||.+ ++..+++||||..+
T Consensus 131 lwnt~g~ck~t~~~~~~~~WVscvrfsP~~~~p~Ivs~s~DktvKvWnl~~~~-l~~~~~gh~~--~v~t~~vSpDGslc 207 (315)
T KOG0279|consen 131 LWNTLGVCKYTIHEDSHREWVSCVRFSPNESNPIIVSASWDKTVKVWNLRNCQ-LRTTFIGHSG--YVNTVTVSPDGSLC 207 (315)
T ss_pred eeeecccEEEEEecCCCcCcEEEEEEcCCCCCcEEEEccCCceEEEEccCCcc-hhhccccccc--cEEEEEECCCCCEE
Confidence 688888888 8888888765 4456667764 57789999999999
Q ss_pred EecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEe
Q psy505 112 VSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 112 ~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~ 154 (161)
+||+.|+.+.+||++.++++..+.+...|.++.|+|++..++.
T Consensus 208 asGgkdg~~~LwdL~~~k~lysl~a~~~v~sl~fspnrywL~~ 250 (315)
T KOG0279|consen 208 ASGGKDGEAMLWDLNEGKNLYSLEAFDIVNSLCFSPNRYWLCA 250 (315)
T ss_pred ecCCCCceEEEEEccCCceeEeccCCCeEeeEEecCCceeEee
Confidence 9999999999999999999999999999999999999766554
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.90 E-value=4.5e-23 Score=176.05 Aligned_cols=142 Identities=14% Similarity=0.205 Sum_probs=127.4
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
.|...|+..+|+||..+|++++. |++||||.+.+..++..++||..||+++. +|||||.|+ .|+|....-.
T Consensus 449 GH~GPVyg~sFsPd~rfLlScSE--D~svRLWsl~t~s~~V~y~GH~~PVwdV~F~P~GyYFatas~D~tArLWs~d~~~ 526 (707)
T KOG0263|consen 449 GHSGPVYGCSFSPDRRFLLSCSE--DSSVRLWSLDTWSCLVIYKGHLAPVWDVQFAPRGYYFATASHDQTARLWSTDHNK 526 (707)
T ss_pred cCCCceeeeeecccccceeeccC--CcceeeeecccceeEEEecCCCcceeeEEecCCceEEEecCCCceeeeeecccCC
Confidence 34455899999999999999775 99999999999999999999999999999 999999999 9999998877
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEeccce
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEEDEEEE 158 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~~~ 158 (161)
++ +++.||-++ +.++.|+||.-++++||+|++||+||+.+|..++.|. |.++|.+++|+|++..++..++.
T Consensus 527 Pl-RifaghlsD--V~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~VRiF~GH~~~V~al~~Sp~Gr~LaSg~ed 598 (707)
T KOG0263|consen 527 PL-RIFAGHLSD--VDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSVRIFTGHKGPVTALAFSPCGRYLASGDED 598 (707)
T ss_pred ch-hhhcccccc--cceEEECCcccccccCCCCceEEEEEcCCCcEEEEecCCCCceEEEEEcCCCceEeecccC
Confidence 77 688999866 4566799999999999999999999999999999987 68999999999998777776643
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-22 Score=155.26 Aligned_cols=143 Identities=13% Similarity=0.192 Sum_probs=126.3
Q ss_pred CCCCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCC
Q psy505 11 PPNPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 11 ~~~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~ 82 (161)
+.|.--|.+++++| +++..+++|. |++.+|||++++.++++|.||++.|++|+ -||+||+|+ +|+||++.
T Consensus 183 ~GH~gDV~slsl~p~~~ntFvSg~c--D~~aklWD~R~~~c~qtF~ghesDINsv~ffP~G~afatGSDD~tcRlyDlRa 260 (343)
T KOG0286|consen 183 HGHTGDVMSLSLSPSDGNTFVSGGC--DKSAKLWDVRSGQCVQTFEGHESDINSVRFFPSGDAFATGSDDATCRLYDLRA 260 (343)
T ss_pred cCCcccEEEEecCCCCCCeEEeccc--ccceeeeeccCcceeEeecccccccceEEEccCCCeeeecCCCceeEEEeecC
Confidence 44555588999999 9999998776 99999999999999999999999999999 899999999 99999999
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEecc
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~ 156 (161)
.+.+ ..|+.......+.+++||.+|..+..|+.|.++.+||.-+++.+..|. |.+.|.+++.+||+.+|++..
T Consensus 261 D~~~-a~ys~~~~~~gitSv~FS~SGRlLfagy~d~~c~vWDtlk~e~vg~L~GHeNRvScl~~s~DG~av~TgS 334 (343)
T KOG0286|consen 261 DQEL-AVYSHDSIICGITSVAFSKSGRLLFAGYDDFTCNVWDTLKGERVGVLAGHENRVSCLGVSPDGMAVATGS 334 (343)
T ss_pred CcEE-eeeccCcccCCceeEEEcccccEEEeeecCCceeEeeccccceEEEeeccCCeeEEEEECCCCcEEEecc
Confidence 7766 466654434458899999999999999999999999999999999886 789999999999999999753
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.6e-22 Score=169.83 Aligned_cols=145 Identities=14% Similarity=0.185 Sum_probs=118.1
Q ss_pred CCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEE--
Q psy505 9 DTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFS-- 79 (161)
Q Consensus 9 ~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd-- 79 (161)
+...|...+.+++++|||+++|+++. ||.|||||.++|-|..+|..|++.|+.++ .+.|+|.|| ||.||
T Consensus 345 KQQgH~~~i~~l~YSpDgq~iaTG~e--DgKVKvWn~~SgfC~vTFteHts~Vt~v~f~~~g~~llssSLDGtVRAwDlk 422 (893)
T KOG0291|consen 345 KQQGHSDRITSLAYSPDGQLIATGAE--DGKVKVWNTQSGFCFVTFTEHTSGVTAVQFTARGNVLLSSSLDGTVRAWDLK 422 (893)
T ss_pred eccccccceeeEEECCCCcEEEeccC--CCcEEEEeccCceEEEEeccCCCceEEEEEEecCCEEEEeecCCeEEeeeec
Confidence 34456677999999999999999876 99999999999999999999999999877 444555555 55555
Q ss_pred ------------------------------------------eCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCC
Q psy505 80 ------------------------------------------LNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSP 117 (161)
Q Consensus 80 ------------------------------------------~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d 117 (161)
++||+.+ .++.||.++ |.+++|+|.+..++|+|.|
T Consensus 423 RYrNfRTft~P~p~QfscvavD~sGelV~AG~~d~F~IfvWS~qTGqll-DiLsGHEgP--Vs~l~f~~~~~~LaS~SWD 499 (893)
T KOG0291|consen 423 RYRNFRTFTSPEPIQFSCVAVDPSGELVCAGAQDSFEIFVWSVQTGQLL-DILSGHEGP--VSGLSFSPDGSLLASGSWD 499 (893)
T ss_pred ccceeeeecCCCceeeeEEEEcCCCCEEEeeccceEEEEEEEeecCeee-ehhcCCCCc--ceeeEEccccCeEEecccc
Confidence 4566544 677888875 6678899999999999999
Q ss_pred CeEEEEecCCC-CeEEEEEecCceEEEEECCc--EEEEEecc-ce
Q psy505 118 RKLTVCHFKRG-SEICNYSFSNTILAVKLNRK--KEEEEDEE-EE 158 (161)
Q Consensus 118 ~~i~iWD~~~~-~~i~~l~~~~~V~~v~~~~~--~~vv~~~~-~~ 158 (161)
+|||+||+-.. ..+.++..++-|++|.|+|+ .++|++.+ +|
T Consensus 500 kTVRiW~if~s~~~vEtl~i~sdvl~vsfrPdG~elaVaTldgqI 544 (893)
T KOG0291|consen 500 KTVRIWDIFSSSGTVETLEIRSDVLAVSFRPDGKELAVATLDGQI 544 (893)
T ss_pred ceEEEEEeeccCceeeeEeeccceeEEEEcCCCCeEEEEEecceE
Confidence 99999997654 45677889999999999987 78888776 44
|
|
| >KOG0263|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.5e-22 Score=172.81 Aligned_cols=134 Identities=13% Similarity=0.217 Sum_probs=121.9
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
.|..+.|+|.|-|.|++|. |++.|+|......++..|.||-+.|.|+. |+|+||.|. +|+||+.+|... +
T Consensus 495 PVwdV~F~P~GyYFatas~--D~tArLWs~d~~~PlRifaghlsDV~cv~FHPNs~Y~aTGSsD~tVRlWDv~~G~~V-R 571 (707)
T KOG0263|consen 495 PVWDVQFAPRGYYFATASH--DQTARLWSTDHNKPLRIFAGHLSDVDCVSFHPNSNYVATGSSDRTVRLWDVSTGNSV-R 571 (707)
T ss_pred ceeeEEecCCceEEEecCC--CceeeeeecccCCchhhhcccccccceEEECCcccccccCCCCceEEEEEcCCCcEE-E
Confidence 3677788899999999765 99999999999999999999999999999 999999999 999999999765 7
Q ss_pred EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEe
Q psy505 89 IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~ 154 (161)
+|.||.+ +|.+++|||+|.+++||++|+.|+|||+..|+.+..+. |.+.|.++.|++++.++|-
T Consensus 572 iF~GH~~--~V~al~~Sp~Gr~LaSg~ed~~I~iWDl~~~~~v~~l~~Ht~ti~SlsFS~dg~vLas 636 (707)
T KOG0263|consen 572 IFTGHKG--PVTALAFSPCGRYLASGDEDGLIKIWDLANGSLVKQLKGHTGTIYSLSFSRDGNVLAS 636 (707)
T ss_pred EecCCCC--ceEEEEEcCCCceEeecccCCcEEEEEcCCCcchhhhhcccCceeEEEEecCCCEEEe
Confidence 8999976 48899999999999999999999999999999998875 7899999999999666654
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=9.6e-22 Score=165.45 Aligned_cols=140 Identities=17% Similarity=0.241 Sum_probs=119.9
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEc-CCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCc
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDA-DNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~-~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~ 83 (161)
.+..+|..++|+|||.++++++. |++|||||+ ..++++++|.||...|.+++ ++++|+.|+ |||||++++
T Consensus 201 ~h~~~v~~~~fs~d~~~l~s~s~--D~tiriwd~~~~~~~~~~l~gH~~~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~ 278 (456)
T KOG0266|consen 201 GHTRGVSDVAFSPDGSYLLSGSD--DKTLRIWDLKDDGRNLKTLKGHSTYVTSVAFSPDGNLLVSGSDDGTVRIWDVRTG 278 (456)
T ss_pred ccccceeeeEECCCCcEEEEecC--CceEEEeeccCCCeEEEEecCCCCceEEEEecCCCCEEEEecCCCcEEEEeccCC
Confidence 45668999999999999998765 999999999 55689999999999999999 999999999 999999998
Q ss_pred CceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC--eEEEEEe-c-C-ceEEEEECCc--EEEEEecc
Q psy505 84 DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS--EICNYSF-S-N-TILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~--~i~~l~~-~-~-~V~~v~~~~~--~~vv~~~~ 156 (161)
++. +.+.+|.+. +..++|++++..+++++.|+.|+|||+.+++ ++.++.- . . ++..++|+|+ .++++.++
T Consensus 279 ~~~-~~l~~hs~~--is~~~f~~d~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~fsp~~~~ll~~~~d 355 (456)
T KOG0266|consen 279 ECV-RKLKGHSDG--ISGLAFSPDGNLLVSASYDGTIRVWDLETGSKLCLKLLSGAENSAPVTSVQFSPNGKYLLSASLD 355 (456)
T ss_pred eEE-EeeeccCCc--eEEEEECCCCCEEEEcCCCccEEEEECCCCceeeeecccCCCCCCceeEEEECCCCcEEEEecCC
Confidence 766 677888764 7788999999999999889999999999999 5666653 2 3 6899999997 55555555
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.89 E-value=4.9e-22 Score=158.26 Aligned_cols=146 Identities=12% Similarity=0.178 Sum_probs=129.2
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----------------
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----------------- 65 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----------------- 65 (161)
+++|+ . +++.-|..+.++.||.++|+++. |.++++|=+.+++|...+++|+.+|.|++
T Consensus 227 cv~t~-~--~h~ewvr~v~v~~DGti~As~s~--dqtl~vW~~~t~~~k~~lR~hEh~vEci~wap~~~~~~i~~at~~~ 301 (406)
T KOG0295|consen 227 CVKTF-P--GHSEWVRMVRVNQDGTIIASCSN--DQTLRVWVVATKQCKAELREHEHPVECIAWAPESSYPSISEATGST 301 (406)
T ss_pred eEEec-c--CchHhEEEEEecCCeeEEEecCC--CceEEEEEeccchhhhhhhccccceEEEEecccccCcchhhccCCC
Confidence 56777 3 34447889999999999998664 99999999999999999999999999998
Q ss_pred ----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCc
Q psy505 66 ----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNT 139 (161)
Q Consensus 66 ----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~ 139 (161)
++.++|.|+ ||+||+.+|.++ ..+.||.+ +|.+++|+|.|.+++|+.+|++|++||+++++|+..+. |..-
T Consensus 302 ~~~~~l~s~SrDktIk~wdv~tg~cL-~tL~ghdn--wVr~~af~p~Gkyi~ScaDDktlrvwdl~~~~cmk~~~ah~hf 378 (406)
T KOG0295|consen 302 NGGQVLGSGSRDKTIKIWDVSTGMCL-FTLVGHDN--WVRGVAFSPGGKYILSCADDKTLRVWDLKNLQCMKTLEAHEHF 378 (406)
T ss_pred CCccEEEeecccceEEEEeccCCeEE-EEEecccc--eeeeeEEcCCCeEEEEEecCCcEEEEEeccceeeeccCCCcce
Confidence 789999999 999999999876 56678864 79999999999999999999999999999999999886 6789
Q ss_pred eEEEEECCcEEEEEecc
Q psy505 140 ILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 140 V~~v~~~~~~~vv~~~~ 156 (161)
|.++.|..+...|+...
T Consensus 379 vt~lDfh~~~p~VvTGs 395 (406)
T KOG0295|consen 379 VTSLDFHKTAPYVVTGS 395 (406)
T ss_pred eEEEecCCCCceEEecc
Confidence 99999999988888754
|
|
| >KOG0272|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=7.3e-22 Score=159.58 Aligned_cols=142 Identities=11% Similarity=0.175 Sum_probs=122.6
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCc
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~ 83 (161)
..|..||..++|+|||..++++|. |..-||||+++|+++..|+||..+|-+|+ .|||||.|+ +||||++-.
T Consensus 300 EGHs~~v~~iaf~~DGSL~~tGGl--D~~~RvWDlRtgr~im~L~gH~k~I~~V~fsPNGy~lATgs~Dnt~kVWDLR~r 377 (459)
T KOG0272|consen 300 EGHSKGVFSIAFQPDGSLAATGGL--DSLGRVWDLRTGRCIMFLAGHIKEILSVAFSPNGYHLATGSSDNTCKVWDLRMR 377 (459)
T ss_pred cccccccceeEecCCCceeeccCc--cchhheeecccCcEEEEecccccceeeEeECCCceEEeecCCCCcEEEeeeccc
Confidence 346778999999999999998776 99999999999999999999999999999 899999999 999999876
Q ss_pred CceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE--EEEEeccc
Q psy505 84 DTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK--EEEEDEEE 157 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~--~vv~~~~~ 157 (161)
+++ -+.-+|.+ -|..+.|+| .+..+++++-|++++||...+.+++..+. |.+.|.++.++++. ++.+-.|+
T Consensus 378 ~~l-y~ipAH~n--lVS~Vk~~p~~g~fL~TasyD~t~kiWs~~~~~~~ksLaGHe~kV~s~Dis~d~~~i~t~s~DR 452 (459)
T KOG0272|consen 378 SEL-YTIPAHSN--LVSQVKYSPQEGYFLVTASYDNTVKIWSTRTWSPLKSLAGHEGKVISLDISPDSQAIATSSFDR 452 (459)
T ss_pred ccc-eecccccc--hhhheEecccCCeEEEEcccCcceeeecCCCcccchhhcCCccceEEEEeccCCceEEEeccCc
Confidence 655 34456754 466788998 78889999999999999999999999986 78999999999986 55544443
|
|
| >KOG0271|consensus | Back alignment and domain information |
|---|
Probab=99.87 E-value=9.3e-22 Score=157.82 Aligned_cols=136 Identities=16% Similarity=0.206 Sum_probs=115.6
Q ss_pred eEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCce-eeeeccCccceeee-----------eEEEec
Q psy505 4 LHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAK-TMIPAHDSPLAALA-----------SLSVGT 71 (161)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~-~~l~~H~~~V~~l~-----------~lasgs 71 (161)
++|. ..|.| -|.+++.+|||+.||+++- ||+|++||..+|+++ ..|.+|...|.+++ +||++|
T Consensus 150 ~~t~-KgH~~--WVlcvawsPDgk~iASG~~--dg~I~lwdpktg~~~g~~l~gH~K~It~Lawep~hl~p~~r~las~s 224 (480)
T KOG0271|consen 150 LFTC-KGHKN--WVLCVAWSPDGKKIASGSK--DGSIRLWDPKTGQQIGRALRGHKKWITALAWEPLHLVPPCRRLASSS 224 (480)
T ss_pred ceee-cCCcc--EEEEEEECCCcchhhcccc--CCeEEEecCCCCCcccccccCcccceeEEeecccccCCCccceeccc
Confidence 4455 34444 5899999999999998665 999999999999865 67999999999999 999999
Q ss_pred CCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 72 KSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 72 ~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
.|| +||||+..+.++ ..+.||+.+ |.++.+-.+++ +.|++.|++||+|+...|+++.+|. |...|+.+++|-+
T Consensus 225 kDg~vrIWd~~~~~~~-~~lsgHT~~--VTCvrwGG~gl-iySgS~DrtIkvw~a~dG~~~r~lkGHahwvN~lalsTd 299 (480)
T KOG0271|consen 225 KDGSVRIWDTKLGTCV-RTLSGHTAS--VTCVRWGGEGL-IYSGSQDRTIKVWRALDGKLCRELKGHAHWVNHLALSTD 299 (480)
T ss_pred CCCCEEEEEccCceEE-EEeccCccc--eEEEEEcCCce-EEecCCCceEEEEEccchhHHHhhcccchheeeeeccch
Confidence 999 999999877655 577899754 66777887775 6788899999999999999999997 6789999999854
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.86 E-value=1.4e-21 Score=157.59 Aligned_cols=138 Identities=14% Similarity=0.214 Sum_probs=116.5
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccC-ccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD-SPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~-~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
|...|.++..+++|.+++++.. +|.||+|+.+ .+.++.+++|. ..|++++ .|+++|+|| |||||....+
T Consensus 137 HDs~Vr~m~ws~~g~wmiSgD~--gG~iKyWqpn-mnnVk~~~ahh~eaIRdlafSpnDskF~t~SdDg~ikiWdf~~~k 213 (464)
T KOG0284|consen 137 HDSPVRTMKWSHNGTWMISGDK--GGMIKYWQPN-MNNVKIIQAHHAEAIRDLAFSPNDSKFLTCSDDGTIKIWDFRMPK 213 (464)
T ss_pred hcccceeEEEccCCCEEEEcCC--CceEEecccc-hhhhHHhhHhhhhhhheeccCCCCceeEEecCCCeEEEEeccCCc
Confidence 4456999999999999998554 9999999987 67778888776 8999999 799999999 9999998765
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE--EEEEecc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK--EEEEDEE 156 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~--~vv~~~~ 156 (161)
+. ..++||... +.++.|+|.--.++|++.|+.||+||.++|+|++++. |.+.|++++|+|++ |..+.+|
T Consensus 214 ee-~vL~GHgwd--VksvdWHP~kgLiasgskDnlVKlWDprSg~cl~tlh~HKntVl~~~f~~n~N~Llt~skD 285 (464)
T KOG0284|consen 214 EE-RVLRGHGWD--VKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLATLHGHKNTVLAVKFNPNGNWLLTGSKD 285 (464)
T ss_pred hh-heeccCCCC--cceeccCCccceeEEccCCceeEeecCCCcchhhhhhhccceEEEEEEcCCCCeeEEccCC
Confidence 43 567899754 6678899988889999999999999999999999985 78999999999984 4444444
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=2.8e-20 Score=152.20 Aligned_cols=147 Identities=16% Similarity=0.131 Sum_probs=125.2
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee---------------eE
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA---------------SL 67 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~---------------~l 67 (161)
+..|+ .+|.++ |.++-++|.|..|++++. |+++|||......+.+.|++|+.+|..+. .+
T Consensus 351 P~~t~-~GH~g~--V~alk~n~tg~LLaS~Sd--D~TlkiWs~~~~~~~~~l~~Hskei~t~~wsp~g~v~~n~~~~~~l 425 (524)
T KOG0273|consen 351 PVKTF-IGHHGE--VNALKWNPTGSLLASCSD--DGTLKIWSMGQSNSVHDLQAHSKEIYTIKWSPTGPVTSNPNMNLML 425 (524)
T ss_pred cceee-ecccCc--eEEEEECCCCceEEEecC--CCeeEeeecCCCcchhhhhhhccceeeEeecCCCCccCCCcCCceE
Confidence 45566 344444 899999999999999876 99999999999999999999997776655 88
Q ss_pred EEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEEC
Q psy505 68 SVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLN 146 (161)
Q Consensus 68 asgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~ 146 (161)
|+++.|+ +|+||+..|.++. .+..|.. +|.+++||||+.++++|+-|+.|+||+.++++...++.-.+.|..|.||
T Consensus 426 ~sas~dstV~lwdv~~gv~i~-~f~kH~~--pVysvafS~~g~ylAsGs~dg~V~iws~~~~~l~~s~~~~~~Ifel~Wn 502 (524)
T KOG0273|consen 426 ASASFDSTVKLWDVESGVPIH-TLMKHQE--PVYSVAFSPNGRYLASGSLDGCVHIWSTKTGKLVKSYQGTGGIFELCWN 502 (524)
T ss_pred EEeecCCeEEEEEccCCceeE-eeccCCC--ceEEEEecCCCcEEEecCCCCeeEeccccchheeEeecCCCeEEEEEEc
Confidence 9999999 9999999999885 4555654 5889999999999999999999999999999999999988999999998
Q ss_pred Cc--EEEEEeccc
Q psy505 147 RK--KEEEEDEEE 157 (161)
Q Consensus 147 ~~--~~vv~~~~~ 157 (161)
-+ ++.++..+.
T Consensus 503 ~~G~kl~~~~sd~ 515 (524)
T KOG0273|consen 503 AAGDKLGACASDG 515 (524)
T ss_pred CCCCEEEEEecCC
Confidence 75 666665543
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.85 E-value=1.8e-20 Score=147.26 Aligned_cols=124 Identities=30% Similarity=0.497 Sum_probs=113.3
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc--eeeeeccCccceeee------eEEEecC
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA--KTMIPAHDSPLAALA------SLSVGTK 72 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~--~~~l~~H~~~V~~l~------~lasgs~ 72 (161)
+|+++.+ +|.+||.|+|++.++.+..+||++|.. -|.|+|-|+..-+. ...+.||.++|.|++ ++||||.
T Consensus 124 ~k~l~~~-et~~NPkGlC~~~~~~~k~~LafPg~k-~GqvQi~dL~~~~~~~p~~I~AH~s~Iacv~Ln~~Gt~vATaSt 201 (346)
T KOG2111|consen 124 PKLLHVI-ETRSNPKGLCSLCPTSNKSLLAFPGFK-TGQVQIVDLASTKPNAPSIINAHDSDIACVALNLQGTLVATAST 201 (346)
T ss_pred hhheeee-ecccCCCceEeecCCCCceEEEcCCCc-cceEEEEEhhhcCcCCceEEEcccCceeEEEEcCCccEEEEecc
Confidence 4789999 999999999999999999999999995 89999999987654 588999999999999 9999999
Q ss_pred Cc--eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCC
Q psy505 73 SG--YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR 127 (161)
Q Consensus 73 dg--iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~ 127 (161)
+| |||||.++|+++.++++|-. ...+.+|+||||..+++..|+.+||+|+.++.
T Consensus 202 kGTLIRIFdt~~g~~l~E~RRG~d-~A~iy~iaFSp~~s~LavsSdKgTlHiF~l~~ 257 (346)
T KOG2111|consen 202 KGTLIRIFDTEDGTLLQELRRGVD-RADIYCIAFSPNSSWLAVSSDKGTLHIFSLRD 257 (346)
T ss_pred CcEEEEEEEcCCCcEeeeeecCCc-hheEEEEEeCCCccEEEEEcCCCeEEEEEeec
Confidence 99 99999999999989988865 45799999999999999888999999998765
|
|
| >KOG0266|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=7.9e-20 Score=153.88 Aligned_cols=138 Identities=15% Similarity=0.202 Sum_probs=119.0
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
..++.++.|+|||..+++++. |+.+++|++.+++ ...++.+|...|++++ ++++|++|+ +||||++...
T Consensus 159 ~~sv~~~~fs~~g~~l~~~~~--~~~i~~~~~~~~~~~~~~~l~~h~~~v~~~~fs~d~~~l~s~s~D~tiriwd~~~~~ 236 (456)
T KOG0266|consen 159 CPSVTCVDFSPDGRALAAASS--DGLIRIWKLEGIKSNLLRELSGHTRGVSDVAFSPDGSYLLSGSDDKTLRIWDLKDDG 236 (456)
T ss_pred cCceEEEEEcCCCCeEEEccC--CCcEEEeecccccchhhccccccccceeeeEECCCCcEEEEecCCceEEEeeccCCC
Confidence 457888999999999998766 9999999998888 7888899999999999 999999999 9999994432
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEec
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~ 155 (161)
...+.+.||.. .+.+++|+|++..++||+.|++|+|||+++++++..+. |.+.|.++.|++++-.++..
T Consensus 237 ~~~~~l~gH~~--~v~~~~f~p~g~~i~Sgs~D~tvriWd~~~~~~~~~l~~hs~~is~~~f~~d~~~l~s~ 306 (456)
T KOG0266|consen 237 RNLKTLKGHST--YVTSVAFSPDGNLLVSGSDDGTVRIWDVRTGECVRKLKGHSDGISGLAFSPDGNLLVSA 306 (456)
T ss_pred eEEEEecCCCC--ceEEEEecCCCCEEEEecCCCcEEEEeccCCeEEEeeeccCCceEEEEECCCCCEEEEc
Confidence 34467789975 57889999999999999999999999999999999997 67899999999985444443
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.83 E-value=2.8e-19 Score=151.73 Aligned_cols=131 Identities=9% Similarity=0.115 Sum_probs=108.6
Q ss_pred CCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCC-------CceeeeeccCccceeee-------eEEEecCCc-eE
Q psy505 13 NPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNL-------HAKTMIPAHDSPLAALA-------SLSVGTKSG-YR 76 (161)
Q Consensus 13 ~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~-------~~~~~l~~H~~~V~~l~-------~lasgs~dg-ir 76 (161)
|...|.+++|+| ++.+||+++. ||+|+|||+.++ +++..+.+|...|.+++ +|++|+.|+ |+
T Consensus 74 H~~~V~~v~fsP~d~~~LaSgS~--DgtIkIWdi~~~~~~~~~~~~l~~L~gH~~~V~~l~f~P~~~~iLaSgs~DgtVr 151 (493)
T PTZ00421 74 QEGPIIDVAFNPFDPQKLFTASE--DGTIMGWGIPEEGLTQNISDPIVHLQGHTKKVGIVSFHPSAMNVLASAGADMVVN 151 (493)
T ss_pred CCCCEEEEEEcCCCCCEEEEEeC--CCEEEEEecCCCccccccCcceEEecCCCCcEEEEEeCcCCCCEEEEEeCCCEEE
Confidence 445699999999 8888998776 999999999865 35778999999999988 799999999 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecC-ceEEEEECCc
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSN-TILAVKLNRK 148 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~-~V~~v~~~~~ 148 (161)
|||+++++.. ..+.+|.. .|.+++|+|++..+++++.|++|+|||+++++.+.++. |.+ .+..+.|.++
T Consensus 152 IWDl~tg~~~-~~l~~h~~--~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~~v~tl~~H~~~~~~~~~w~~~ 222 (493)
T PTZ00421 152 VWDVERGKAV-EVIKCHSD--QITSLEWNLDGSLLCTTSKDKKLNIIDPRDGTIVSSVEAHASAKSQRCLWAKR 222 (493)
T ss_pred EEECCCCeEE-EEEcCCCC--ceEEEEEECCCCEEEEecCCCEEEEEECCCCcEEEEEecCCCCcceEEEEcCC
Confidence 9999998755 45667764 47788999999989999999999999999999988876 433 3445677665
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.8e-20 Score=157.05 Aligned_cols=133 Identities=11% Similarity=0.248 Sum_probs=119.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
|.+-|.+++++|+.+.+|+++. |.+.+||++.....+.+|.||+-.|+||. ++||+|.|+ ||||.+.+..+
T Consensus 462 HdKdIN~Vaia~ndkLiAT~Sq--DktaKiW~le~~~l~~vLsGH~RGvw~V~Fs~~dq~laT~SgD~TvKIW~is~fSC 539 (775)
T KOG0319|consen 462 HDKDINCVAIAPNDKLIATGSQ--DKTAKIWDLEQLRLLGVLSGHTRGVWCVSFSKNDQLLATCSGDKTVKIWSISTFSC 539 (775)
T ss_pred hcccccceEecCCCceEEeccc--ccceeeecccCceEEEEeeCCccceEEEEeccccceeEeccCCceEEEEEecccee
Confidence 4456888999999999998664 99999999999999999999999999999 899999999 99999999887
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEE
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKE 150 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~ 150 (161)
+ +.++||+. .|....|=.++..++|+++|+-+||||++++.|++++. |.+.||++.-+|...
T Consensus 540 l-kT~eGH~~--aVlra~F~~~~~qliS~~adGliKlWnikt~eC~~tlD~H~DrvWaL~~~~~~~ 602 (775)
T KOG0319|consen 540 L-KTFEGHTS--AVLRASFIRNGKQLISAGADGLIKLWNIKTNECEMTLDAHNDRVWALSVSPLLD 602 (775)
T ss_pred e-eeecCccc--eeEeeeeeeCCcEEEeccCCCcEEEEeccchhhhhhhhhccceeEEEeecCccc
Confidence 7 68899975 47777888899999999999999999999999999996 899999999999744
|
|
| >KOG0279|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=9.3e-19 Score=135.71 Aligned_cols=140 Identities=12% Similarity=0.163 Sum_probs=113.5
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC-----CCceeeeeccCccceeee------eEEE
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-----LHAKTMIPAHDSPLAALA------SLSV 69 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-----~~~~~~l~~H~~~V~~l~------~las 69 (161)
|.+.-|+ +. ++.-|.+++..+.+.-+.++++. |.++-+|++.. |.++..|+||++.|+.+. +..|
T Consensus 5 l~l~~tl-~g--h~d~Vt~la~~~~~~~~l~sasr-Dk~ii~W~L~~dd~~~G~~~r~~~GHsH~v~dv~~s~dg~~alS 80 (315)
T KOG0279|consen 5 LVLRGTL-EG--HTDWVTALAIKIKNSDILVSASR-DKTIIVWKLTSDDIKYGVPVRRLTGHSHFVSDVVLSSDGNFALS 80 (315)
T ss_pred heeeeee-cC--CCceEEEEEeecCCCceEEEccc-ceEEEEEEeccCccccCceeeeeeccceEecceEEccCCceEEe
Confidence 3445566 44 44558888887766556666775 99999999875 567889999999999988 8889
Q ss_pred ecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-e--cCceEEEEE
Q psy505 70 GTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-F--SNTILAVKL 145 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~--~~~V~~v~~ 145 (161)
+|.|+ +|+||+.+|++. ..|.||... |.+++|+||...++||+-|++|++||+. |.|..++. . ++.|.+|+|
T Consensus 81 ~swD~~lrlWDl~~g~~t-~~f~GH~~d--Vlsva~s~dn~qivSGSrDkTiklwnt~-g~ck~t~~~~~~~~WVscvrf 156 (315)
T KOG0279|consen 81 ASWDGTLRLWDLATGEST-RRFVGHTKD--VLSVAFSTDNRQIVSGSRDKTIKLWNTL-GVCKYTIHEDSHREWVSCVRF 156 (315)
T ss_pred ccccceEEEEEecCCcEE-EEEEecCCc--eEEEEecCCCceeecCCCcceeeeeeec-ccEEEEEecCCCcCcEEEEEE
Confidence 99999 999999999755 567899754 7899999999999999999999999997 44554543 2 689999999
Q ss_pred CCc
Q psy505 146 NRK 148 (161)
Q Consensus 146 ~~~ 148 (161)
+|+
T Consensus 157 sP~ 159 (315)
T KOG0279|consen 157 SPN 159 (315)
T ss_pred cCC
Confidence 998
|
|
| >KOG0295|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=2.3e-19 Score=143.11 Aligned_cols=140 Identities=8% Similarity=0.062 Sum_probs=117.8
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
-+|.++.|-|-|.++++++. |.+|+.||+.+|-|+++|++|...|+.+. ++|+||.|. +++|-+.++++.
T Consensus 194 h~vS~V~f~P~gd~ilS~sr--D~tik~We~~tg~cv~t~~~h~ewvr~v~v~~DGti~As~s~dqtl~vW~~~t~~~k- 270 (406)
T KOG0295|consen 194 HGVSSVFFLPLGDHILSCSR--DNTIKAWECDTGYCVKTFPGHSEWVRMVRVNQDGTIIASCSNDQTLRVWVVATKQCK- 270 (406)
T ss_pred cceeeEEEEecCCeeeeccc--ccceeEEecccceeEEeccCchHhEEEEEecCCeeEEEecCCCceEEEEEeccchhh-
Confidence 36778888888999998765 99999999999999999999999999998 999999999 999999998655
Q ss_pred eEEeecCcceEEEEEeec---C----------CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEE
Q psy505 88 QIYENSQEDVCIVERLFS---S----------SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEE 151 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs---~----------~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~v 151 (161)
..+++|..++.+++.+.- | .+..+++++.|++||+||+.+|.|+.++. |.+.|.+++|+|. .|+
T Consensus 271 ~~lR~hEh~vEci~wap~~~~~~i~~at~~~~~~~~l~s~SrDktIk~wdv~tg~cL~tL~ghdnwVr~~af~p~Gkyi~ 350 (406)
T KOG0295|consen 271 AELREHEHPVECIAWAPESSYPSISEATGSTNGGQVLGSGSRDKTIKIWDVSTGMCLFTLVGHDNWVRGVAFSPGGKYIL 350 (406)
T ss_pred hhhhccccceEEEEecccccCcchhhccCCCCCccEEEeecccceEEEEeccCCeEEEEEecccceeeeeEEcCCCeEEE
Confidence 567888877666654321 1 23578888999999999999999999986 6899999999975 677
Q ss_pred EEeccc
Q psy505 152 EEDEEE 157 (161)
Q Consensus 152 v~~~~~ 157 (161)
-|.+|+
T Consensus 351 ScaDDk 356 (406)
T KOG0295|consen 351 SCADDK 356 (406)
T ss_pred EEecCC
Confidence 777764
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=8.2e-20 Score=153.77 Aligned_cols=138 Identities=12% Similarity=0.169 Sum_probs=119.5
Q ss_pred ceEEecCCCCCCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------eEEEecCC
Q psy505 3 VLHTIRDTPPNPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------SLSVGTKS 73 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~lasgs~d 73 (161)
|-.++ ++|.|- |-.++|+| |....|+++- |++||||.+.+-.+..+|+||+..|+|+. +|+||++|
T Consensus 132 ~~qtf-eGH~Hy--VMqv~fnPkD~ntFaS~sL--DrTVKVWslgs~~~nfTl~gHekGVN~Vdyy~~gdkpylIsgaDD 206 (794)
T KOG0276|consen 132 CEQTF-EGHEHY--VMQVAFNPKDPNTFASASL--DRTVKVWSLGSPHPNFTLEGHEKGVNCVDYYTGGDKPYLISGADD 206 (794)
T ss_pred eeeEE-cCcceE--EEEEEecCCCccceeeeec--cccEEEEEcCCCCCceeeeccccCcceEEeccCCCcceEEecCCC
Confidence 44566 666664 78889998 6678887666 99999999999999999999999999999 99999999
Q ss_pred c-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-cCceEEEEECCc
Q psy505 74 G-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-SNTILAVKLNRK 148 (161)
Q Consensus 74 g-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~ 148 (161)
. +||||..|..++ ++++||++. |..+.|.|..-.++||++|+++|||+..+-+....+.+ -..|++|+-.+.
T Consensus 207 ~tiKvWDyQtk~CV-~TLeGHt~N--vs~v~fhp~lpiiisgsEDGTvriWhs~Ty~lE~tLn~gleRvW~I~~~k~ 280 (794)
T KOG0276|consen 207 LTIKVWDYQTKSCV-QTLEGHTNN--VSFVFFHPELPIIISGSEDGTVRIWNSKTYKLEKTLNYGLERVWCIAAHKG 280 (794)
T ss_pred ceEEEeecchHHHH-HHhhccccc--ceEEEecCCCcEEEEecCCccEEEecCcceehhhhhhcCCceEEEEeecCC
Confidence 9 999999997666 688999865 55677999999999999999999999999888888887 489999998775
|
|
| >KOG0286|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=5.3e-19 Score=137.91 Aligned_cols=126 Identities=17% Similarity=0.195 Sum_probs=108.9
Q ss_pred cCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCceeeEEeec
Q psy505 22 VNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIYENS 93 (161)
Q Consensus 22 ~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~~~~ 93 (161)
|-+|+ .|++++. |.++-+||+++|+.+..|.||.+.|-+++ .|+||+-|. .+|||++++.+. +.|.||
T Consensus 153 f~dD~-~ilT~SG--D~TCalWDie~g~~~~~f~GH~gDV~slsl~p~~~ntFvSg~cD~~aklWD~R~~~c~-qtF~gh 228 (343)
T KOG0286|consen 153 FLDDN-HILTGSG--DMTCALWDIETGQQTQVFHGHTGDVMSLSLSPSDGNTFVSGGCDKSAKLWDVRSGQCV-QTFEGH 228 (343)
T ss_pred EcCCC-ceEecCC--CceEEEEEcccceEEEEecCCcccEEEEecCCCCCCeEEecccccceeeeeccCccee-Eeeccc
Confidence 33465 4444443 99999999999999999999999999998 899999999 999999998655 788899
Q ss_pred CcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec---CceEEEEECCc-EEEEE
Q psy505 94 QEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS---NTILAVKLNRK-KEEEE 153 (161)
Q Consensus 94 ~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~---~~V~~v~~~~~-~~vv~ 153 (161)
..+ |.++.|.|++.++++|++|.++++||++..+.+..|++. .+|.+|+||.. +|..+
T Consensus 229 esD--INsv~ffP~G~afatGSDD~tcRlyDlRaD~~~a~ys~~~~~~gitSv~FS~SGRlLfa 290 (343)
T KOG0286|consen 229 ESD--INSVRFFPSGDAFATGSDDATCRLYDLRADQELAVYSHDSIICGITSVAFSKSGRLLFA 290 (343)
T ss_pred ccc--cceEEEccCCCeeeecCCCceeEEEeecCCcEEeeeccCcccCCceeEEEcccccEEEe
Confidence 865 778899999999999999999999999999999999864 48999999986 55555
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.82 E-value=3.2e-19 Score=142.44 Aligned_cols=131 Identities=13% Similarity=0.157 Sum_probs=114.9
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
|..-|.+++++|...++++++. |++|+|||+.+|+...++.||..-|+.|+ |+.|+++|+ ||-||++..+-
T Consensus 150 HlgWVr~vavdP~n~wf~tgs~--DrtikIwDlatg~LkltltGhi~~vr~vavS~rHpYlFs~gedk~VKCwDLe~nkv 227 (460)
T KOG0285|consen 150 HLGWVRSVAVDPGNEWFATGSA--DRTIKIWDLATGQLKLTLTGHIETVRGVAVSKRHPYLFSAGEDKQVKCWDLEYNKV 227 (460)
T ss_pred ccceEEEEeeCCCceeEEecCC--CceeEEEEcccCeEEEeecchhheeeeeeecccCceEEEecCCCeeEEEechhhhh
Confidence 3345889999999889998665 99999999999999999999999999999 999999999 99999987554
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
+ +-+.||-+ .|.+++..|..-.+++++.|.+++|||.++...+..+. |.++|.+|.++|.
T Consensus 228 I-R~YhGHlS--~V~~L~lhPTldvl~t~grDst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~ 288 (460)
T KOG0285|consen 228 I-RHYHGHLS--GVYCLDLHPTLDVLVTGGRDSTIRVWDIRTRASVHVLSGHTNPVASVMCQPT 288 (460)
T ss_pred H-HHhccccc--eeEEEeccccceeEEecCCcceEEEeeecccceEEEecCCCCcceeEEeecC
Confidence 4 55667765 47788889988889999999999999999999999998 7899999999864
|
|
| >KOG0276|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-19 Score=151.29 Aligned_cols=149 Identities=13% Similarity=0.141 Sum_probs=123.8
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC-CceeeeeccCccceeee-------eEEEecC
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-HAKTMIPAHDSPLAALA-------SLSVGTK 72 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-~~~~~l~~H~~~V~~l~-------~lasgs~ 72 (161)
|+-++++ +. |++-+.+++.||.-.++.+++. |-+||+||.+.+ .|.++|+||++-|-+++ .|||||-
T Consensus 87 ~ekV~~F-eA--H~DyIR~iavHPt~P~vLtsSD--Dm~iKlW~we~~wa~~qtfeGH~HyVMqv~fnPkD~ntFaS~sL 161 (794)
T KOG0276|consen 87 GEKVKTF-EA--HSDYIRSIAVHPTLPYVLTSSD--DMTIKLWDWENEWACEQTFEGHEHYVMQVAFNPKDPNTFASASL 161 (794)
T ss_pred ceeeEEe-ec--cccceeeeeecCCCCeEEecCC--ccEEEEeeccCceeeeeEEcCcceEEEEEEecCCCccceeeeec
Confidence 3456666 44 5556899999999999998765 999999999876 68999999999999999 9999999
Q ss_pred Cc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEE
Q psy505 73 SG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKE 150 (161)
Q Consensus 73 dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~ 150 (161)
|+ ||+|++.+..+- -+++||..++.+++...-++--+++||++|.++||||.++.+|+++++ |...|..+-|+|..-
T Consensus 162 DrTVKVWslgs~~~n-fTl~gHekGVN~Vdyy~~gdkpylIsgaDD~tiKvWDyQtk~CV~TLeGHt~Nvs~v~fhp~lp 240 (794)
T KOG0276|consen 162 DRTVKVWSLGSPHPN-FTLEGHEKGVNCVDYYTGGDKPYLISGADDLTIKVWDYQTKSCVQTLEGHTNNVSFVFFHPELP 240 (794)
T ss_pred cccEEEEEcCCCCCc-eeeeccccCcceEEeccCCCcceEEecCCCceEEEeecchHHHHHHhhcccccceEEEecCCCc
Confidence 99 999999776554 467899876555554444567789999999999999999999999998 789999999999966
Q ss_pred EEEec
Q psy505 151 EEEDE 155 (161)
Q Consensus 151 vv~~~ 155 (161)
+++..
T Consensus 241 iiisg 245 (794)
T KOG0276|consen 241 IIISG 245 (794)
T ss_pred EEEEe
Confidence 55543
|
|
| >KOG0285|consensus | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.6e-19 Score=142.93 Aligned_cols=143 Identities=15% Similarity=0.220 Sum_probs=125.2
Q ss_pred CCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeC
Q psy505 9 DTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 9 ~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~ 81 (161)
+-+.|..||++++.+|.-..|+++|. |.++||||++++..++.|.||.++|.+|. .+.+||.|+ ||+||++
T Consensus 230 ~YhGHlS~V~~L~lhPTldvl~t~gr--Dst~RvWDiRtr~~V~~l~GH~~~V~~V~~~~~dpqvit~S~D~tvrlWDl~ 307 (460)
T KOG0285|consen 230 HYHGHLSGVYCLDLHPTLDVLVTGGR--DSTIRVWDIRTRASVHVLSGHTNPVASVMCQPTDPQVITGSHDSTVRLWDLR 307 (460)
T ss_pred HhccccceeEEEeccccceeEEecCC--cceEEEeeecccceEEEecCCCCcceeEEeecCCCceEEecCCceEEEeeec
Confidence 33678889999999998888898776 99999999999999999999999999998 899999999 9999999
Q ss_pred CcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEeccc
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEEDEEE 157 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~~ 157 (161)
.|+.. ..+..| ...+.+++.+|....++|++.|+ ++=|++-.|..++.++ +...|+++..|.|...++..|+
T Consensus 308 agkt~-~tlt~h--kksvral~lhP~e~~fASas~dn-ik~w~~p~g~f~~nlsgh~~iintl~~nsD~v~~~G~dn 380 (460)
T KOG0285|consen 308 AGKTM-ITLTHH--KKSVRALCLHPKENLFASASPDN-IKQWKLPEGEFLQNLSGHNAIINTLSVNSDGVLVSGGDN 380 (460)
T ss_pred cCcee-Eeeecc--cceeeEEecCCchhhhhccCCcc-ceeccCCccchhhccccccceeeeeeeccCceEEEcCCc
Confidence 98754 344445 45688999999999999987765 9999999999999887 5789999999999999888775
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.4e-18 Score=136.03 Aligned_cols=142 Identities=15% Similarity=0.173 Sum_probs=113.5
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC-CC-ceeeeeccCccceeee------eEEEecCCc-eEEEEeCCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-LH-AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~~-~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~ 83 (161)
-.+.|.+++|+|....++++|+. ||+||+|+++. |. ..+....|.+||-+++ .+++|+-|+ .|+||+.++
T Consensus 26 P~DsIS~l~FSP~~~~~~~A~SW-D~tVR~wevq~~g~~~~ka~~~~~~PvL~v~WsddgskVf~g~~Dk~~k~wDL~S~ 104 (347)
T KOG0647|consen 26 PEDSISALAFSPQADNLLAAGSW-DGTVRIWEVQNSGQLVPKAQQSHDGPVLDVCWSDDGSKVFSGGCDKQAKLWDLASG 104 (347)
T ss_pred cccchheeEeccccCceEEeccc-CCceEEEEEecCCcccchhhhccCCCeEEEEEccCCceEEeeccCCceEEEEccCC
Confidence 34578899999955555555665 99999999987 33 2355678999999999 888999999 999999998
Q ss_pred CceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEeccc
Q psy505 84 DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEEDEEE 157 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~~~~ 157 (161)
+. .....|..++..+.+.-.+++.++++||.|++||.||.+..+++.++..++.|++...=...+||++.|+
T Consensus 105 Q~--~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~~pv~t~~LPeRvYa~Dv~~pm~vVata~r 176 (347)
T KOG0647|consen 105 QV--SQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSSNPVATLQLPERVYAADVLYPMAVVATAER 176 (347)
T ss_pred Ce--eeeeecccceeEEEEecCCCcceeEecccccceeecccCCCCeeeeeeccceeeehhccCceeEEEecCC
Confidence 64 3456677664444333345667899999999999999999999999999999999988888888888875
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=1.5e-18 Score=132.31 Aligned_cols=137 Identities=12% Similarity=0.115 Sum_probs=111.0
Q ss_pred eEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eE
Q psy505 4 LHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YR 76 (161)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-ir 76 (161)
++++ +.+.- .|.++-+|.||+|..++|+ |.+||+||+..|.+++++.+|..+|.+++ .||+|+.|. +.
T Consensus 10 ~~~l-~~~qg--aV~avryN~dGnY~ltcGs--drtvrLWNp~rg~liktYsghG~EVlD~~~s~Dnskf~s~GgDk~v~ 84 (307)
T KOG0316|consen 10 LSIL-DCAQG--AVRAVRYNVDGNYCLTCGS--DRTVRLWNPLRGALIKTYSGHGHEVLDAALSSDNSKFASCGGDKAVQ 84 (307)
T ss_pred ceee-ccccc--ceEEEEEccCCCEEEEcCC--CceEEeecccccceeeeecCCCceeeeccccccccccccCCCCceEE
Confidence 4455 34333 4889999999999999998 99999999999999999999999999888 899999998 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC--eEEEEE-ecCceEEEEECCc
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS--EICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~--~i~~l~-~~~~V~~v~~~~~ 148 (161)
+||++||+.. +-++||.. .|..+.|+.+...++||+-|.++++||.+... +++.+. +.+.|.+|..+..
T Consensus 85 vwDV~TGkv~-Rr~rgH~a--qVNtV~fNeesSVv~SgsfD~s~r~wDCRS~s~ePiQildea~D~V~Si~v~~h 156 (307)
T KOG0316|consen 85 VWDVNTGKVD-RRFRGHLA--QVNTVRFNEESSVVASGSFDSSVRLWDCRSRSFEPIQILDEAKDGVSSIDVAEH 156 (307)
T ss_pred EEEcccCeee-eecccccc--eeeEEEecCcceEEEeccccceeEEEEcccCCCCccchhhhhcCceeEEEeccc
Confidence 9999999866 56788865 57888999999999999999999999998763 333332 3445555555443
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.80 E-value=5.8e-20 Score=145.49 Aligned_cols=138 Identities=17% Similarity=0.209 Sum_probs=121.1
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
....|.+++|+.|...+|+++. ||.|++|.+++|.|+..|+ ||+..|+|++ .+.++|.|. +||--+.+|+
T Consensus 262 md~aVlci~FSRDsEMlAsGsq--DGkIKvWri~tG~ClRrFdrAHtkGvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK 339 (508)
T KOG0275|consen 262 MDDAVLCISFSRDSEMLASGSQ--DGKIKVWRIETGQCLRRFDRAHTKGVTCLSFSRDNSQILSASFDQTVRIHGLKSGK 339 (508)
T ss_pred cccceEEEeecccHHHhhccCc--CCcEEEEEEecchHHHHhhhhhccCeeEEEEccCcchhhcccccceEEEeccccch
Confidence 3567999999999999998554 9999999999999999997 9999999999 788999999 9999999999
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec---CceEEEEE---CCcEEEEEec
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS---NTILAVKL---NRKKEEEEDE 155 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~---~~V~~v~~---~~~~~vv~~~ 155 (161)
++ +.++||+ .++....|+++|-.+.|+++|++|+||+.++++|+.++... -+|++|-. ||..++||-.
T Consensus 340 ~L-KEfrGHs--Syvn~a~ft~dG~~iisaSsDgtvkvW~~KtteC~~Tfk~~~~d~~vnsv~~~PKnpeh~iVCNr 413 (508)
T KOG0275|consen 340 CL-KEFRGHS--SYVNEATFTDDGHHIISASSDGTVKVWHGKTTECLSTFKPLGTDYPVNSVILLPKNPEHFIVCNR 413 (508)
T ss_pred hH-HHhcCcc--ccccceEEcCCCCeEEEecCCccEEEecCcchhhhhhccCCCCcccceeEEEcCCCCceEEEEcC
Confidence 88 4668986 47889999999999999999999999999999999998743 37888777 6778888754
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.79 E-value=9.7e-18 Score=143.93 Aligned_cols=138 Identities=5% Similarity=0.015 Sum_probs=105.5
Q ss_pred CCceeEEeecCCC-ceEEEEcCCCCcceEEEEEcCCCC--------ceeeeeccCccceeee-------eEEEecCCc-e
Q psy505 13 NPNGICCLCVNSD-NCYLAYPGSNSIGEVQIFDADNLH--------AKTMIPAHDSPLAALA-------SLSVGTKSG-Y 75 (161)
Q Consensus 13 ~~~~v~~~~~~~d-~~~la~~g~~~dg~v~iWd~~~~~--------~~~~l~~H~~~V~~l~-------~lasgs~dg-i 75 (161)
|...|.+++++|+ +.+||+++. ||+|+|||+.++. ++..+.+|...|.+++ +|++|+.|+ |
T Consensus 73 H~~~V~~lafsP~~~~lLASgS~--DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~~V~sVaf~P~g~~iLaSgS~DgtI 150 (568)
T PTZ00420 73 HTSSILDLQFNPCFSEILASGSE--DLTIRVWEIPHNDESVKEIKDPQCILKGHKKKISIIDWNPMNYYIMCSSGFDSFV 150 (568)
T ss_pred CCCCEEEEEEcCCCCCEEEEEeC--CCeEEEEECCCCCccccccccceEEeecCCCcEEEEEECCCCCeEEEEEeCCCeE
Confidence 4456999999996 788888775 9999999998642 3457899999999998 578999999 9
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCce-----EEEEECCc-
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTI-----LAVKLNRK- 148 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V-----~~v~~~~~- 148 (161)
+|||+++++... .+. |. ..+.+++|+|++..+++++.|++|+|||+++++++.++. |.+.+ +...|+++
T Consensus 151 rIWDl~tg~~~~-~i~-~~--~~V~SlswspdG~lLat~s~D~~IrIwD~Rsg~~i~tl~gH~g~~~s~~v~~~~fs~d~ 226 (568)
T PTZ00420 151 NIWDIENEKRAF-QIN-MP--KKLSSLKWNIKGNLLSGTCVGKHMHIIDPRKQEIASSFHIHDGGKNTKNIWIDGLGGDD 226 (568)
T ss_pred EEEECCCCcEEE-EEe-cC--CcEEEEEECCCCCEEEEEecCCEEEEEECCCCcEEEEEecccCCceeEEEEeeeEcCCC
Confidence 999999886542 222 22 247789999999888888789999999999999998886 44433 33345555
Q ss_pred -EEEEEecc
Q psy505 149 -KEEEEDEE 156 (161)
Q Consensus 149 -~~vv~~~~ 156 (161)
.++.+..+
T Consensus 227 ~~IlTtG~d 235 (568)
T PTZ00420 227 NYILSTGFS 235 (568)
T ss_pred CEEEEEEcC
Confidence 45555544
|
|
| >KOG0273|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.6e-18 Score=139.88 Aligned_cols=139 Identities=15% Similarity=0.210 Sum_probs=113.2
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC-----------------------------------------Cce
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-----------------------------------------HAK 51 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-----------------------------------------~~~ 51 (161)
|..+|.++-.+.+|.||+++|- ||++-+||..+| +++
T Consensus 275 HkgPI~slKWnk~G~yilS~~v--D~ttilwd~~~g~~~q~f~~~s~~~lDVdW~~~~~F~ts~td~~i~V~kv~~~~P~ 352 (524)
T KOG0273|consen 275 HKGPIFSLKWNKKGTYILSGGV--DGTTILWDAHTGTVKQQFEFHSAPALDVDWQSNDEFATSSTDGCIHVCKVGEDRPV 352 (524)
T ss_pred cCCceEEEEEcCCCCEEEeccC--CccEEEEeccCceEEEeeeeccCCccceEEecCceEeecCCCceEEEEEecCCCcc
Confidence 4456999999999999998664 999999998666 355
Q ss_pred eeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCC---------eEEEEecC
Q psy505 52 TMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSS---------LVAVVSLS 115 (161)
Q Consensus 52 ~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~---------~~~~~s~~ 115 (161)
.++.||.++|+++. +|+|+|+|+ +|||+...+... ..++.|+. .|..+.++|. +..+++++
T Consensus 353 ~t~~GH~g~V~alk~n~tg~LLaS~SdD~TlkiWs~~~~~~~-~~l~~Hsk--ei~t~~wsp~g~v~~n~~~~~~l~sas 429 (524)
T KOG0273|consen 353 KTFIGHHGEVNALKWNPTGSLLASCSDDGTLKIWSMGQSNSV-HDLQAHSK--EIYTIKWSPTGPVTSNPNMNLMLASAS 429 (524)
T ss_pred eeeecccCceEEEEECCCCceEEEecCCCeeEeeecCCCcch-hhhhhhcc--ceeeEeecCCCCccCCCcCCceEEEee
Confidence 67788999999888 999999999 999998765544 45566753 4777778873 35677778
Q ss_pred CCCeEEEEecCCCCeEEEE-EecCceEEEEECCcEEEEEecc
Q psy505 116 SPRKLTVCHFKRGSEICNY-SFSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 116 ~d~~i~iWD~~~~~~i~~l-~~~~~V~~v~~~~~~~vv~~~~ 156 (161)
.|++|++||+.++.++..| .|..+|++|+|+|++-.++..+
T Consensus 430 ~dstV~lwdv~~gv~i~~f~kH~~pVysvafS~~g~ylAsGs 471 (524)
T KOG0273|consen 430 FDSTVKLWDVESGVPIHTLMKHQEPVYSVAFSPNGRYLASGS 471 (524)
T ss_pred cCCeEEEEEccCCceeEeeccCCCceEEEEecCCCcEEEecC
Confidence 8999999999999999998 6999999999999976666544
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=3.8e-19 Score=141.81 Aligned_cols=131 Identities=13% Similarity=0.191 Sum_probs=79.8
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee---------------------------
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------------------------- 65 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------------------------- 65 (161)
++..|.++-+ |...++++++ |.+|+|||+++|++++++-+|...|-.+.
T Consensus 236 HtGSVLCLqy--d~rviisGSS--DsTvrvWDv~tge~l~tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it 311 (499)
T KOG0281|consen 236 HTGSVLCLQY--DERVIVSGSS--DSTVRVWDVNTGEPLNTLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDIT 311 (499)
T ss_pred CCCcEEeeec--cceEEEecCC--CceEEEEeccCCchhhHHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHH
Confidence 3444666666 4455555444 77777777777777777766666654333
Q ss_pred --------------------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEe
Q psy505 66 --------------------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124 (161)
Q Consensus 66 --------------------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD 124 (161)
+++++|.|. ||+|++.|++.+ +++.||..+ |.++-| ++..+|||++|++|++||
T Consensus 312 ~rrVLvGHrAaVNvVdfd~kyIVsASgDRTikvW~~st~efv-Rtl~gHkRG--IAClQY--r~rlvVSGSSDntIRlwd 386 (499)
T KOG0281|consen 312 LRRVLVGHRAAVNVVDFDDKYIVSASGDRTIKVWSTSTCEFV-RTLNGHKRG--IACLQY--RDRLVVSGSSDNTIRLWD 386 (499)
T ss_pred HHHHHhhhhhheeeeccccceEEEecCCceEEEEeccceeee-hhhhccccc--ceehhc--cCeEEEecCCCceEEEEe
Confidence 455555555 555555555433 344444422 333223 344567777778888888
Q ss_pred cCCCCeEEEEE-ecCceEEEEECCcEEEE
Q psy505 125 FKRGSEICNYS-FSNTILAVKLNRKKEEE 152 (161)
Q Consensus 125 ~~~~~~i~~l~-~~~~V~~v~~~~~~~vv 152 (161)
.+.|+|+.-+. |.+-|.+++|+..++|-
T Consensus 387 i~~G~cLRvLeGHEeLvRciRFd~krIVS 415 (499)
T KOG0281|consen 387 IECGACLRVLEGHEELVRCIRFDNKRIVS 415 (499)
T ss_pred ccccHHHHHHhchHHhhhheeecCceeee
Confidence 88887777765 55678888887777664
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=2.9e-18 Score=134.07 Aligned_cols=131 Identities=18% Similarity=0.250 Sum_probs=112.4
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~ 84 (161)
+...|-.+.+.+|+..+.++|. |.+|+.||+++|++...+++|++-|+++. ++.|||+|| +||||+++.+
T Consensus 89 HsgAVM~l~~~~d~s~i~S~gt--Dk~v~~wD~~tG~~~rk~k~h~~~vNs~~p~rrg~~lv~SgsdD~t~kl~D~R~k~ 166 (338)
T KOG0265|consen 89 HSGAVMELHGMRDGSHILSCGT--DKTVRGWDAETGKRIRKHKGHTSFVNSLDPSRRGPQLVCSGSDDGTLKLWDIRKKE 166 (338)
T ss_pred ccceeEeeeeccCCCEEEEecC--CceEEEEecccceeeehhccccceeeecCccccCCeEEEecCCCceEEEEeecccc
Confidence 3446778889999999999886 99999999999999999999999999988 999999999 9999999866
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK 149 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~ 149 (161)
.. ++++. ...+.++.|.-..--+.||+-||.|++||++++.+...++ |.++|..+..+|++
T Consensus 167 ~~-~t~~~---kyqltAv~f~d~s~qv~sggIdn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~g 228 (338)
T KOG0265|consen 167 AI-KTFEN---KYQLTAVGFKDTSDQVISGGIDNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYG 228 (338)
T ss_pred hh-hcccc---ceeEEEEEecccccceeeccccCceeeeccccCcceEEeecccCceeeEEeccCC
Confidence 54 34422 3457788888766667788889999999999999999887 68999999999974
|
|
| >KOG0281|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-18 Score=138.90 Aligned_cols=138 Identities=18% Similarity=0.316 Sum_probs=102.4
Q ss_pred ceEEecCCC-CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eE
Q psy505 3 VLHTIRDTP-PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YR 76 (161)
Q Consensus 3 ~~~~~~~~~-~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-ir 76 (161)
++.+| ... .+.+||+++.+ |...+++ |.. |.+|+|||.++..|++.|.||++.|-|+. .++|||.|. |+
T Consensus 186 ~~~ri-nc~Se~skgVYClQY--DD~kiVS-Glr-DnTikiWD~n~~~c~~~L~GHtGSVLCLqyd~rviisGSSDsTvr 260 (499)
T KOG0281|consen 186 LLQRI-NCRSENSKGVYCLQY--DDEKIVS-GLR-DNTIKIWDKNSLECLKILTGHTGSVLCLQYDERVIVSGSSDSTVR 260 (499)
T ss_pred eeeee-cCCcccCCceEEEEe--cchhhhc-ccc-cCceEEeccccHHHHHhhhcCCCcEEeeeccceEEEecCCCceEE
Confidence 34556 233 36789999998 5456665 564 99999999999999999999999999999 889999999 99
Q ss_pred EEEeCCcCceeeEEeecCcc-----------------------------------------eEEEEEeecCCeEEEEecC
Q psy505 77 LFSLNSIDTLEQIYENSQED-----------------------------------------VCIVERLFSSSLVAVVSLS 115 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~-----------------------------------------~~v~~~~fs~~~~~~~s~~ 115 (161)
+||+++|+++. ++-+|... ..|..+.|+.. ++||++
T Consensus 261 vWDv~tge~l~-tlihHceaVLhlrf~ng~mvtcSkDrsiaVWdm~sps~it~rrVLvGHrAaVNvVdfd~k--yIVsAS 337 (499)
T KOG0281|consen 261 VWDVNTGEPLN-TLIHHCEAVLHLRFSNGYMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDK--YIVSAS 337 (499)
T ss_pred EEeccCCchhh-HHhhhcceeEEEEEeCCEEEEecCCceeEEEeccCchHHHHHHHHhhhhhheeeeccccc--eEEEec
Confidence 99999999874 33344221 12333345444 455556
Q ss_pred CCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 116 SPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 116 ~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
+|++||+||..+++++..+. |...|-+++++..
T Consensus 338 gDRTikvW~~st~efvRtl~gHkRGIAClQYr~r 371 (499)
T KOG0281|consen 338 GDRTIKVWSTSTCEFVRTLNGHKRGIACLQYRDR 371 (499)
T ss_pred CCceEEEEeccceeeehhhhcccccceehhccCe
Confidence 68888888888888887775 5677777777543
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=3e-18 Score=147.41 Aligned_cols=136 Identities=15% Similarity=0.159 Sum_probs=114.0
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC--------------------------------C-----------
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN--------------------------------L----------- 48 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~--------------------------------~----------- 48 (161)
.+..+|.++-|++||+|||++|. ||.||||.+.. .
T Consensus 265 ah~gaIw~mKFS~DGKyLAsaGe--D~virVWkVie~e~~~~~~~~~~~~~~~~~~~s~~~p~~s~~~~~~~~~s~~~~~ 342 (712)
T KOG0283|consen 265 AHKGAIWAMKFSHDGKYLASAGE--DGVIRVWKVIESERMRVAEGDSSCMYFEYNANSQIEPSTSSEEKISSRTSSSRKG 342 (712)
T ss_pred ccCCcEEEEEeCCCCceeeecCC--CceEEEEEEeccchhcccccccchhhhhhhhccccCccccccccccccccccccc
Confidence 45667999999999999999886 99999999876 0
Q ss_pred -----------------CceeeeeccCccceeee-----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeec
Q psy505 49 -----------------HAKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFS 105 (161)
Q Consensus 49 -----------------~~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs 105 (161)
+++..|.||.+.|-+++ +|.|+|.|. +|||++...++| .+|+ |. -+|.+++|+
T Consensus 343 ~~s~~~~~p~~~f~f~ekP~~ef~GHt~DILDlSWSKn~fLLSSSMDKTVRLWh~~~~~CL-~~F~-Hn--dfVTcVaFn 418 (712)
T KOG0283|consen 343 SQSPCVLLPLKAFVFSEKPFCEFKGHTADILDLSWSKNNFLLSSSMDKTVRLWHPGRKECL-KVFS-HN--DFVTCVAFN 418 (712)
T ss_pred cCCccccCCCccccccccchhhhhccchhheecccccCCeeEeccccccEEeecCCCccee-eEEe-cC--CeeEEEEec
Confidence 34567889999999999 999999999 999999887777 5665 43 378899999
Q ss_pred C-CeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEE
Q psy505 106 S-SLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEE 153 (161)
Q Consensus 106 ~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~ 153 (161)
| |..+++||+-|+.||||++...+.+--...+.-|.++.|.||+-.++
T Consensus 419 PvDDryFiSGSLD~KvRiWsI~d~~Vv~W~Dl~~lITAvcy~PdGk~av 467 (712)
T KOG0283|consen 419 PVDDRYFISGSLDGKVRLWSISDKKVVDWNDLRDLITAVCYSPDGKGAV 467 (712)
T ss_pred ccCCCcEeecccccceEEeecCcCeeEeehhhhhhheeEEeccCCceEE
Confidence 9 77889999999999999998777654455678999999999954443
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.78 E-value=8.4e-18 Score=128.99 Aligned_cols=127 Identities=14% Similarity=0.248 Sum_probs=108.1
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCce
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~ 86 (161)
.|.++...||+..||++|. ..||+||+++++ ++.+|++|++.|.++. ++.+||+|| +||||+++-. +
T Consensus 42 qVNrLeiTpdk~~LAaa~~---qhvRlyD~~S~np~Pv~t~e~h~kNVtaVgF~~dgrWMyTgseDgt~kIWdlR~~~-~ 117 (311)
T KOG0315|consen 42 QVNRLEITPDKKDLAAAGN---QHVRLYDLNSNNPNPVATFEGHTKNVTAVGFQCDGRWMYTGSEDGTVKIWDLRSLS-C 117 (311)
T ss_pred ceeeEEEcCCcchhhhccC---CeeEEEEccCCCCCceeEEeccCCceEEEEEeecCeEEEecCCCceEEEEeccCcc-c
Confidence 4889999999999999774 799999999986 5899999999999999 999999999 9999998843 3
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe--cCceEEEEECCcE
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF--SNTILAVKLNRKK 149 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~~~ 149 (161)
.+.++.. ..|.++..+||..-+.++..++.|+|||+....|.+++.. ...|.++.+.||+
T Consensus 118 qR~~~~~---spVn~vvlhpnQteLis~dqsg~irvWDl~~~~c~~~liPe~~~~i~sl~v~~dg 179 (311)
T KOG0315|consen 118 QRNYQHN---SPVNTVVLHPNQTELISGDQSGNIRVWDLGENSCTHELIPEDDTSIQSLTVMPDG 179 (311)
T ss_pred chhccCC---CCcceEEecCCcceEEeecCCCcEEEEEccCCccccccCCCCCcceeeEEEcCCC
Confidence 3455432 3578888999999999988888899999999998888764 3589999999884
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=4.4e-17 Score=126.09 Aligned_cols=149 Identities=11% Similarity=0.182 Sum_probs=120.1
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC--CceeeeeccCccceeee------eEEEecCCc
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL--HAKTMIPAHDSPLAALA------SLSVGTKSG 74 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~--~~~~~l~~H~~~V~~l~------~lasgs~dg 74 (161)
|.+++ +. .+.+.|.++|++|.|++||+++. |.++-||.-..+ +|+.+|+||+++|.|++ +||++|.|.
T Consensus 52 ck~vl-d~-~hkrsVRsvAwsp~g~~La~aSF--D~t~~Iw~k~~~efecv~~lEGHEnEVK~Vaws~sG~~LATCSRDK 127 (312)
T KOG0645|consen 52 CKTVL-DD-GHKRSVRSVAWSPHGRYLASASF--DATVVIWKKEDGEFECVATLEGHENEVKCVAWSASGNYLATCSRDK 127 (312)
T ss_pred EEEec-cc-cchheeeeeeecCCCcEEEEeec--cceEEEeecCCCceeEEeeeeccccceeEEEEcCCCCEEEEeeCCC
Confidence 34455 23 67788999999999999998665 999999986654 68999999999999999 999999999
Q ss_pred -eEEEEeCCcCce--eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCC---CCeEEEEE-ecCceEEEEECC
Q psy505 75 -YRLFSLNSIDTL--EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR---GSEICNYS-FSNTILAVKLNR 147 (161)
Q Consensus 75 -iriwd~~~~~~~--~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~---~~~i~~l~-~~~~V~~v~~~~ 147 (161)
+-||.+..++.+ ..++++|..+ |-.+.|+|..-.|+|++=|++||+|+... -.|.+++. +.++|+++.|+|
T Consensus 128 SVWiWe~deddEfec~aVL~~HtqD--VK~V~WHPt~dlL~S~SYDnTIk~~~~~~dddW~c~~tl~g~~~TVW~~~F~~ 205 (312)
T KOG0645|consen 128 SVWIWEIDEDDEFECIAVLQEHTQD--VKHVIWHPTEDLLFSCSYDNTIKVYRDEDDDDWECVQTLDGHENTVWSLAFDN 205 (312)
T ss_pred eEEEEEecCCCcEEEEeeecccccc--ccEEEEcCCcceeEEeccCCeEEEEeecCCCCeeEEEEecCccceEEEEEecC
Confidence 999999866543 2466788765 44567999666678877899999998762 35778886 567999999998
Q ss_pred c--EEEEEeccc
Q psy505 148 K--KEEEEDEEE 157 (161)
Q Consensus 148 ~--~~vv~~~~~ 157 (161)
. +++.+.+|.
T Consensus 206 ~G~rl~s~sdD~ 217 (312)
T KOG0645|consen 206 IGSRLVSCSDDG 217 (312)
T ss_pred CCceEEEecCCc
Confidence 5 788887773
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.4e-18 Score=146.46 Aligned_cols=143 Identities=8% Similarity=0.097 Sum_probs=116.4
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-e
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-Y 75 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-i 75 (161)
||+-+ +.|.- .|.++.|+|++...+++|. |-.||+|+..+++|+.+|.||-+.|+.+. ++.|+|+|. |
T Consensus 43 li~rF-deHdG--pVRgv~FH~~qplFVSGGD--DykIkVWnYk~rrclftL~GHlDYVRt~~FHheyPWIlSASDDQTI 117 (1202)
T KOG0292|consen 43 LIDRF-DEHDG--PVRGVDFHPTQPLFVSGGD--DYKIKVWNYKTRRCLFTLLGHLDYVRTVFFHHEYPWILSASDDQTI 117 (1202)
T ss_pred HHhhh-hccCC--ccceeeecCCCCeEEecCC--ccEEEEEecccceehhhhccccceeEEeeccCCCceEEEccCCCeE
Confidence 34455 44444 3889999999999998776 99999999999999999999999999999 999999999 9
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCC--------C-------------------
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR--------G------------------- 128 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~--------~------------------- 128 (161)
|||+..+++++ .+++||.+ +|.+..|.|.--.+||+|-|++|||||..- +
T Consensus 118 rIWNwqsr~~i-avltGHnH--YVMcAqFhptEDlIVSaSLDQTVRVWDisGLRkk~~~pg~~e~~~~~~~~~~dLfg~~ 194 (1202)
T KOG0292|consen 118 RIWNWQSRKCI-AVLTGHNH--YVMCAQFHPTEDLIVSASLDQTVRVWDISGLRKKNKAPGSLEDQMRGQQGNSDLFGQT 194 (1202)
T ss_pred EEEeccCCceE-EEEecCce--EEEeeccCCccceEEEecccceEEEEeecchhccCCCCCCchhhhhccccchhhcCCc
Confidence 99999998876 68899986 788899999666788889999999999752 1
Q ss_pred CeEEE--EE-ecCceEEEEECCcEEEEE
Q psy505 129 SEICN--YS-FSNTILAVKLNRKKEEEE 153 (161)
Q Consensus 129 ~~i~~--l~-~~~~V~~v~~~~~~~vv~ 153 (161)
.++-. +. |...|+.++|+|+.-++|
T Consensus 195 DaVVK~VLEGHDRGVNwaAfhpTlpliV 222 (1202)
T KOG0292|consen 195 DAVVKHVLEGHDRGVNWAAFHPTLPLIV 222 (1202)
T ss_pred CeeeeeeecccccccceEEecCCcceEE
Confidence 12212 22 456899999999744433
|
|
| >KOG0315|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.3e-18 Score=128.74 Aligned_cols=127 Identities=17% Similarity=0.175 Sum_probs=108.8
Q ss_pred ceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCceEEEEeCCcCc-eeeEEeecCcceE
Q psy505 26 NCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSGYRLFSLNSIDT-LEQIYENSQEDVC 98 (161)
Q Consensus 26 ~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dgiriwd~~~~~~-~~~~~~~~~~~~~ 98 (161)
.-+||++|. |-+||+|.+.+|+|..+++-..+-|+.+. +||+|....||+||++++.+ -...+++|...
T Consensus 10 ~viLvsA~Y--DhTIRfWqa~tG~C~rTiqh~dsqVNrLeiTpdk~~LAaa~~qhvRlyD~~S~np~Pv~t~e~h~kN-- 85 (311)
T KOG0315|consen 10 PVILVSAGY--DHTIRFWQALTGICSRTIQHPDSQVNRLEITPDKKDLAAAGNQHVRLYDLNSNNPNPVATFEGHTKN-- 85 (311)
T ss_pred ceEEEeccC--cceeeeeehhcCeEEEEEecCccceeeEEEcCCcchhhhccCCeeEEEEccCCCCCceeEEeccCCc--
Confidence 356777665 99999999999999999998888899888 89999888899999999875 34678888654
Q ss_pred EEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEecc
Q psy505 99 IVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 99 v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
|.++.|.-++.++.+|++|+++||||++.-.|-..|.+.++|..|.++|+ .|++..++
T Consensus 86 VtaVgF~~dgrWMyTgseDgt~kIWdlR~~~~qR~~~~~spVn~vvlhpnQteLis~dqs 145 (311)
T KOG0315|consen 86 VTAVGFQCDGRWMYTGSEDGTVKIWDLRSLSCQRNYQHNSPVNTVVLHPNQTELISGDQS 145 (311)
T ss_pred eEEEEEeecCeEEEecCCCceEEEEeccCcccchhccCCCCcceEEecCCcceEEeecCC
Confidence 67778999999999999999999999999777778899999999999886 66665544
|
|
| >KOG0292|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.2e-18 Score=148.71 Aligned_cols=139 Identities=9% Similarity=0.155 Sum_probs=120.6
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
.+..+..++|+|...++.++-. .|.|++||.+=+.++..|..|.+||+++. +|+||++|- ||+|+..+.++
T Consensus 8 kSsRvKglsFHP~rPwILtslH--sG~IQlWDYRM~tli~rFdeHdGpVRgv~FH~~qplFVSGGDDykIkVWnYk~rrc 85 (1202)
T KOG0292|consen 8 KSSRVKGLSFHPKRPWILTSLH--SGVIQLWDYRMGTLIDRFDEHDGPVRGVDFHPTQPLFVSGGDDYKIKVWNYKTRRC 85 (1202)
T ss_pred ccccccceecCCCCCEEEEeec--CceeeeehhhhhhHHhhhhccCCccceeeecCCCCeEEecCCccEEEEEeccccee
Confidence 3446889999999889888665 79999999999999999999999999999 999999999 99999988766
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+ -.+.||.+ +|..+.|++.+-++.|+|+|+||+|||-++++|++.+. |..-|-+.+|+|. .+|-+-.|
T Consensus 86 l-ftL~GHlD--YVRt~~FHheyPWIlSASDDQTIrIWNwqsr~~iavltGHnHYVMcAqFhptEDlIVSaSLD 156 (1202)
T KOG0292|consen 86 L-FTLLGHLD--YVRTVFFHHEYPWILSASDDQTIRIWNWQSRKCIAVLTGHNHYVMCAQFHPTEDLIVSASLD 156 (1202)
T ss_pred h-hhhccccc--eeEEeeccCCCceEEEccCCCeEEEEeccCCceEEEEecCceEEEeeccCCccceEEEeccc
Confidence 5 34568864 78889999999999999999999999999999999997 6789999999994 44444333
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.77 E-value=7.5e-19 Score=144.08 Aligned_cols=146 Identities=13% Similarity=0.198 Sum_probs=115.0
Q ss_pred cceEEecCCCCCCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCC-CCceeeeeccCccceeee------eEEEecCC
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADN-LHAKTMIPAHDSPLAALA------SLSVGTKS 73 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~-~~~~~~l~~H~~~V~~l~------~lasgs~d 73 (161)
|+++++ ..|+.||.++-+-| .+.+++++|. |+.|+|||+-. ++|+.+|.||..+|++++ .|.|+|-|
T Consensus 205 k~~~~~---~gH~kgvsai~~fp~~~hLlLS~gm--D~~vklW~vy~~~~~lrtf~gH~k~Vrd~~~s~~g~~fLS~sfD 279 (503)
T KOG0282|consen 205 KLSHNL---SGHTKGVSAIQWFPKKGHLLLSGGM--DGLVKLWNVYDDRRCLRTFKGHRKPVRDASFNNCGTSFLSASFD 279 (503)
T ss_pred hheeec---cCCccccchhhhccceeeEEEecCC--CceEEEEEEecCcceehhhhcchhhhhhhhccccCCeeeeeecc
Confidence 456677 35778999999999 7777777665 99999999887 899999999999999998 88899999
Q ss_pred c-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe-EEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--
Q psy505 74 G-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL-VAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK-- 148 (161)
Q Consensus 74 g-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~-~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~-- 148 (161)
+ +|+||++||+++..+..++ ...++-|.|+. -.+..|..|+.|+-||.++++.++++. +-+.|+.+.|-++
T Consensus 280 ~~lKlwDtETG~~~~~f~~~~----~~~cvkf~pd~~n~fl~G~sd~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~ 355 (503)
T KOG0282|consen 280 RFLKLWDTETGQVLSRFHLDK----VPTCVKFHPDNQNIFLVGGSDKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGR 355 (503)
T ss_pred eeeeeeccccceEEEEEecCC----CceeeecCCCCCcEEEEecCCCcEEEEeccchHHHHHHHhhhhheeeeEEccCCc
Confidence 9 9999999998664443332 23456687755 334445578899999999999999986 5689999999665
Q ss_pred EEEEEecc
Q psy505 149 KEEEEDEE 156 (161)
Q Consensus 149 ~~vv~~~~ 156 (161)
+.+...++
T Consensus 356 rFissSDd 363 (503)
T KOG0282|consen 356 RFISSSDD 363 (503)
T ss_pred eEeeeccC
Confidence 55555444
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.77 E-value=9.5e-17 Score=121.47 Aligned_cols=143 Identities=16% Similarity=0.276 Sum_probs=115.1
Q ss_pred eEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eE
Q psy505 4 LHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YR 76 (161)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-ir 76 (161)
++++ ..| ...|.+++++|++.++++++. ||.|++||+.+++....+.+|..++.++. ++++++.|| ++
T Consensus 2 ~~~~-~~h--~~~i~~~~~~~~~~~l~~~~~--~g~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~ 76 (289)
T cd00200 2 RRTL-KGH--TGGVTCVAFSPDGKLLATGSG--DGTIKVWDLETGELLRTLKGHTGPVRDVAASADGTYLASGSSDKTIR 76 (289)
T ss_pred chHh-ccc--CCCEEEEEEcCCCCEEEEeec--CcEEEEEEeeCCCcEEEEecCCcceeEEEECCCCCEEEEEcCCCeEE
Confidence 4556 444 456899999999999998775 89999999999988899999999997777 789999999 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc-EEEEEe
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK-KEEEED 154 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~-~~vv~~ 154 (161)
+||+++++.. ..+..|.. .+.++.|+|+...+++++.|+.|++||+++++.+..+. +.+.|.+++|+|+ .++++.
T Consensus 77 i~~~~~~~~~-~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~ 153 (289)
T cd00200 77 LWDLETGECV-RTLTGHTS--YVSSVAFSPDGRILSSSSRDKTIKVWDVETGKCLTTLRGHTDWVNSVAFSPDGTFVASS 153 (289)
T ss_pred EEEcCcccce-EEEeccCC--cEEEEEEcCCCCEEEEecCCCeEEEEECCCcEEEEEeccCCCcEEEEEEcCcCCEEEEE
Confidence 9999886655 34455643 47788899987677777668999999999888888876 6788999999995 333333
|
|
| >KOG0284|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=8.7e-19 Score=141.51 Aligned_cols=129 Identities=12% Similarity=0.197 Sum_probs=113.6
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
..|..++|+|+....++++. ||+|+|||....+....|.||.-.|+|+. ++||||.|. ||+||.++|.++.
T Consensus 181 eaIRdlafSpnDskF~t~Sd--Dg~ikiWdf~~~kee~vL~GHgwdVksvdWHP~kgLiasgskDnlVKlWDprSg~cl~ 258 (464)
T KOG0284|consen 181 EAIRDLAFSPNDSKFLTCSD--DGTIKIWDFRMPKEERVLRGHGWDVKSVDWHPTKGLIASGSKDNLVKLWDPRSGSCLA 258 (464)
T ss_pred hhhheeccCCCCceeEEecC--CCeEEEEeccCCchhheeccCCCCcceeccCCccceeEEccCCceeEeecCCCcchhh
Confidence 46889999997777777665 99999999999998899999999999999 999999999 9999999999874
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
.+.+|.+ .|.++.|+|++-+|++++.|..++++|.++-+.+..+. |...|.++.++|-
T Consensus 259 -tlh~HKn--tVl~~~f~~n~N~Llt~skD~~~kv~DiR~mkEl~~~r~Hkkdv~~~~WhP~ 317 (464)
T KOG0284|consen 259 -TLHGHKN--TVLAVKFNPNGNWLLTGSKDQSCKVFDIRTMKELFTYRGHKKDVTSLTWHPL 317 (464)
T ss_pred -hhhhccc--eEEEEEEcCCCCeeEEccCCceEEEEehhHhHHHHHhhcchhhheeeccccc
Confidence 5556654 68899999999999999999999999999888777776 7889999999883
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.76 E-value=2.1e-17 Score=141.16 Aligned_cols=134 Identities=13% Similarity=0.166 Sum_probs=111.7
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCce
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~ 86 (161)
.|..+|.++++...+..+++++. |.++|+||..+|.|.+.|.+|.+.|.++. .+.+||.|. ||+|+++++..+
T Consensus 247 GH~g~V~~l~~~~~~~~lvsgS~--D~t~rvWd~~sg~C~~~l~gh~stv~~~~~~~~~~~sgs~D~tVkVW~v~n~~~l 324 (537)
T KOG0274|consen 247 GHFGGVWGLAFPSGGDKLVSGST--DKTERVWDCSTGECTHSLQGHTSSVRCLTIDPFLLVSGSRDNTVKVWDVTNGACL 324 (537)
T ss_pred CCCCCceeEEEecCCCEEEEEec--CCcEEeEecCCCcEEEEecCCCceEEEEEccCceEeeccCCceEEEEeccCcceE
Confidence 46677889988654667776443 99999999999999999999999999999 888899999 999999998877
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECC-cEEEE
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNR-KKEEE 152 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~-~~~vv 152 (161)
.++++|.++ |.++.++.+ .+++|+.|++|+|||+.+++|+.++. |...|.++.+.+ ..++-
T Consensus 325 -~l~~~h~~~--V~~v~~~~~--~lvsgs~d~~v~VW~~~~~~cl~sl~gH~~~V~sl~~~~~~~~~S 387 (537)
T KOG0274|consen 325 -NLLRGHTGP--VNCVQLDEP--LLVSGSYDGTVKVWDPRTGKCLKSLSGHTGRVYSLIVDSENRLLS 387 (537)
T ss_pred -EEecccccc--EEEEEecCC--EEEEEecCceEEEEEhhhceeeeeecCCcceEEEEEecCcceEEe
Confidence 677778764 666667644 45666678899999999999999997 789999999988 55443
|
|
| >KOG0319|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=2.1e-17 Score=141.13 Aligned_cols=144 Identities=13% Similarity=0.181 Sum_probs=112.7
Q ss_pred CCCCCceeEEeecCCCc-eEEEEcCCCCcceEEEEEcCCC---------CceeeeeccCccceeee------eEEEecCC
Q psy505 10 TPPNPNGICCLCVNSDN-CYLAYPGSNSIGEVQIFDADNL---------HAKTMIPAHDSPLAALA------SLSVGTKS 73 (161)
Q Consensus 10 ~~~~~~~v~~~~~~~d~-~~la~~g~~~dg~v~iWd~~~~---------~~~~~l~~H~~~V~~l~------~lasgs~d 73 (161)
+|.|..|..++ +..+ ..+++.+. |+++|+|++..- .+..+-.+|...|+||+ ++|+||+|
T Consensus 409 gH~~svgava~--~~~~asffvsvS~--D~tlK~W~l~~s~~~~~~~~~~~~~t~~aHdKdIN~Vaia~ndkLiAT~SqD 484 (775)
T KOG0319|consen 409 GHTNSVGAVAG--SKLGASFFVSVSQ--DCTLKLWDLPKSKETAFPIVLTCRYTERAHDKDINCVAIAPNDKLIATGSQD 484 (775)
T ss_pred ccccccceeee--cccCccEEEEecC--CceEEEecCCCcccccccceehhhHHHHhhcccccceEecCCCceEEecccc
Confidence 45666554444 4444 45565443 999999999861 12234469999999999 99999999
Q ss_pred c-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEE--CCcE
Q psy505 74 G-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKL--NRKK 149 (161)
Q Consensus 74 g-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~--~~~~ 149 (161)
. .|||+++.+. +..+++||..+ +-++.|+|+...++++|+|.|||||.+.+..|+.+|+ |.+.|+.+.| +...
T Consensus 485 ktaKiW~le~~~-l~~vLsGH~RG--vw~V~Fs~~dq~laT~SgD~TvKIW~is~fSClkT~eGH~~aVlra~F~~~~~q 561 (775)
T KOG0319|consen 485 KTAKIWDLEQLR-LLGVLSGHTRG--VWCVSFSKNDQLLATCSGDKTVKIWSISTFSCLKTFEGHTSAVLRASFIRNGKQ 561 (775)
T ss_pred cceeeecccCce-EEEEeeCCccc--eEEEEeccccceeEeccCCceEEEEEeccceeeeeecCccceeEeeeeeeCCcE
Confidence 9 9999998655 45788999865 5566799998889999999999999999999999998 7899999999 4457
Q ss_pred EEEEeccceee
Q psy505 150 EEEEDEEEEKK 160 (161)
Q Consensus 150 ~vv~~~~~~~~ 160 (161)
++-+..+-+-|
T Consensus 562 liS~~adGliK 572 (775)
T KOG0319|consen 562 LISAGADGLIK 572 (775)
T ss_pred EEeccCCCcEE
Confidence 77777664433
|
|
| >KOG0274|consensus | Back alignment and domain information |
|---|
Probab=99.75 E-value=1.9e-17 Score=141.51 Aligned_cols=145 Identities=15% Similarity=0.252 Sum_probs=118.6
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eE
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YR 76 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-ir 76 (161)
+|.+++ .++.+ .++++.. .+..+++ |+. |.+|++||+.++++++++.||.++|+++. ++.+||.|| |+
T Consensus 282 ~C~~~l-~gh~s--tv~~~~~--~~~~~~s-gs~-D~tVkVW~v~n~~~l~l~~~h~~~V~~v~~~~~~lvsgs~d~~v~ 354 (537)
T KOG0274|consen 282 ECTHSL-QGHTS--SVRCLTI--DPFLLVS-GSR-DNTVKVWDVTNGACLNLLRGHTGPVNCVQLDEPLLVSGSYDGTVK 354 (537)
T ss_pred cEEEEe-cCCCc--eEEEEEc--cCceEee-ccC-CceEEEEeccCcceEEEeccccccEEEEEecCCEEEEEecCceEE
Confidence 467777 45444 4777766 4455555 565 99999999999999999999999999999 999999999 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC-CeEEEEE-ecCceEEEEECCcEEEEEe
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG-SEICNYS-FSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~-~~i~~l~-~~~~V~~v~~~~~~~vv~~ 154 (161)
+||+.+++++ ..++||.+ .|.++.+.+. ..+.||+-|++|++||+.+. +|+..|. +.+-|..+.+....++-..
T Consensus 355 VW~~~~~~cl-~sl~gH~~--~V~sl~~~~~-~~~~Sgs~D~~IkvWdl~~~~~c~~tl~~h~~~v~~l~~~~~~Lvs~~ 430 (537)
T KOG0274|consen 355 VWDPRTGKCL-KSLSGHTG--RVYSLIVDSE-NRLLSGSLDTTIKVWDLRTKRKCIHTLQGHTSLVSSLLLRDNFLVSSS 430 (537)
T ss_pred EEEhhhceee-eeecCCcc--eEEEEEecCc-ceEEeeeeccceEeecCCchhhhhhhhcCCcccccccccccceeEecc
Confidence 9999999877 67789875 5778888884 45677778899999999999 9999987 4678888888888887766
Q ss_pred ccc
Q psy505 155 EEE 157 (161)
Q Consensus 155 ~~~ 157 (161)
.|.
T Consensus 431 aD~ 433 (537)
T KOG0274|consen 431 ADG 433 (537)
T ss_pred ccc
Confidence 654
|
|
| >cd00200 WD40 WD40 domain, found in a number of eukaryotic proteins that cover a wide variety of functions including adaptor/regulatory modules in signal transduction, pre-mRNA processing and cytoskeleton assembly; typically contains a GH dipeptide 11-24 residues from its N-terminus and the WD dipeptide at its C-terminus and is 40 residues long, hence the name WD40; between GH and WD lies a conserved core; serves as a stable propeller-like platform to which proteins can bind either stably or reversibly; forms a propeller-like structure with several blades where each blade is composed of a four-stranded anti-parallel b-sheet; instances with few detectable copies are hypothesized to form larger structures by dimerization; each WD40 sequence repeat forms the first three strands of one blade and the last strand in the next blade; the last C-terminal WD40 repeat completes the blade structure of the first WD40 repeat to create the closed ring propeller-structure; residues on the top and botto | Back alignment and domain information |
|---|
Probab=99.74 E-value=3e-16 Score=118.73 Aligned_cols=139 Identities=14% Similarity=0.251 Sum_probs=114.2
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+...+.+++++|++.++++++. ||.|++||+++++++..+..|..+|.++. .+++++.|| +++||+++++.
T Consensus 134 ~~~~i~~~~~~~~~~~l~~~~~--~~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~~~~i~i~d~~~~~~ 211 (289)
T cd00200 134 HTDWVNSVAFSPDGTFVASSSQ--DGTIKLWDLRTGKCVATLTGHTGEVNSVAFSPDGEKLLSSSSDGTIKLWDLSTGKC 211 (289)
T ss_pred CCCcEEEEEEcCcCCEEEEEcC--CCcEEEEEccccccceeEecCccccceEEECCCcCEEEEecCCCcEEEEECCCCce
Confidence 4446889999999888887654 89999999999999999999999999998 688888899 99999988765
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
. ..+..|.. .+.++.|+|++..+++++.|+.|++||..+++.+..+. +...|.++.|+|+ .++++..+
T Consensus 212 ~-~~~~~~~~--~i~~~~~~~~~~~~~~~~~~~~i~i~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d 282 (289)
T cd00200 212 L-GTLRGHEN--GVNSVAFSPDGYLLASGSEDGTIRVWDLRTGECVQTLSGHTNSVTSLAWSPDGKRLASGSAD 282 (289)
T ss_pred e-cchhhcCC--ceEEEEEcCCCcEEEEEcCCCcEEEEEcCCceeEEEccccCCcEEEEEECCCCCEEEEecCC
Confidence 5 34445543 47788999988778887778999999999998888876 5679999999995 56655555
|
|
| >PTZ00421 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=5.7e-16 Score=131.58 Aligned_cols=138 Identities=12% Similarity=0.137 Sum_probs=100.5
Q ss_pred CCceeEEeecCCCc-eEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDN-CYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~-~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
+...|.+++++|++ .+|++++. ||+|+|||+.+++.+..+.+|.+.|.+++ +|++|+.|+ |||||+++++
T Consensus 124 H~~~V~~l~f~P~~~~iLaSgs~--DgtVrIWDl~tg~~~~~l~~h~~~V~sla~spdG~lLatgs~Dg~IrIwD~rsg~ 201 (493)
T PTZ00421 124 HTKKVGIVSFHPSAMNVLASAGA--DMVVNVWDVERGKAVEVIKCHSDQITSLEWNLDGSLLCTTSKDKKLNIIDPRDGT 201 (493)
T ss_pred CCCcEEEEEeCcCCCCEEEEEeC--CCEEEEEECCCCeEEEEEcCCCCceEEEEEECCCCEEEEecCCCEEEEEECCCCc
Confidence 34568889999975 57887665 99999999999999999999999999998 899999999 9999999987
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEE--e--cCCCCeEEEEecCCCC-eEEEEEe--cCceEEEEECCc--EEEEEe
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVV--S--LSSPRKLTVCHFKRGS-EICNYSF--SNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~--s--~~~d~~i~iWD~~~~~-~i~~l~~--~~~V~~v~~~~~--~~vv~~ 154 (161)
.+ ..+.+|.+. ......|.++.-.++ + .+.|++|+|||+++.. ++..... ...+....|+++ .++++.
T Consensus 202 ~v-~tl~~H~~~-~~~~~~w~~~~~~ivt~G~s~s~Dr~VklWDlr~~~~p~~~~~~d~~~~~~~~~~d~d~~~L~lgg 278 (493)
T PTZ00421 202 IV-SSVEAHASA-KSQRCLWAKRKDLIITLGCSKSQQRQIMLWDTRKMASPYSTVDLDQSSALFIPFFDEDTNLLYIGS 278 (493)
T ss_pred EE-EEEecCCCC-cceEEEEcCCCCeEEEEecCCCCCCeEEEEeCCCCCCceeEeccCCCCceEEEEEcCCCCEEEEEE
Confidence 65 345667643 223445666432232 2 2458899999998754 4443332 345666778886 344444
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.73 E-value=2.9e-16 Score=139.89 Aligned_cols=138 Identities=13% Similarity=0.249 Sum_probs=108.4
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC----C----ceeeeeccCccceeee-------eEEEecCCc-eE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL----H----AKTMIPAHDSPLAALA-------SLSVGTKSG-YR 76 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~----~----~~~~l~~H~~~V~~l~-------~lasgs~dg-ir 76 (161)
+...|++++|+|+|.++|++|. ||.|+|||+.+. . +...+.+ ...|.+++ +||+|+.|| |+
T Consensus 482 ~~~~V~~i~fs~dg~~latgg~--D~~I~iwd~~~~~~~~~~~~~~~~~~~~-~~~v~~l~~~~~~~~~las~~~Dg~v~ 558 (793)
T PLN00181 482 SSNLVCAIGFDRDGEFFATAGV--NKKIKIFECESIIKDGRDIHYPVVELAS-RSKLSGICWNSYIKSQVASSNFEGVVQ 558 (793)
T ss_pred CCCcEEEEEECCCCCEEEEEeC--CCEEEEEECCcccccccccccceEEecc-cCceeeEEeccCCCCEEEEEeCCCeEE
Confidence 4556999999999999999876 999999998642 1 2233443 45677777 799999999 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECC---cEEEE
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNR---KKEEE 152 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~---~~~vv 152 (161)
|||+.+++.+ ..+.+|.. .|.+++|+| ++..+++++.|++|+|||+++++++..+.....|.++.|++ ..+++
T Consensus 559 lWd~~~~~~~-~~~~~H~~--~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~~~~~~~~~v~~v~~~~~~g~~lat 635 (793)
T PLN00181 559 VWDVARSQLV-TEMKEHEK--RVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSIGTIKTKANICCVQFPSESGRSLAF 635 (793)
T ss_pred EEECCCCeEE-EEecCCCC--CEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEEEEEecCCCeEEEEEeCCCCCEEEE
Confidence 9999987655 45677865 477889986 67778888899999999999999998888778899999954 25555
Q ss_pred Eecc
Q psy505 153 EDEE 156 (161)
Q Consensus 153 ~~~~ 156 (161)
...+
T Consensus 636 gs~d 639 (793)
T PLN00181 636 GSAD 639 (793)
T ss_pred EeCC
Confidence 5544
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=1.2e-16 Score=131.25 Aligned_cols=134 Identities=14% Similarity=0.227 Sum_probs=110.0
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC-CceeeeeccCccceeee------eEEEecCCceEEEEeCCc
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-HAKTMIPAHDSPLAALA------SLSVGTKSGYRLFSLNSI 83 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-~~~~~l~~H~~~V~~l~------~lasgs~dgiriwd~~~~ 83 (161)
..+.+-|.+.+++|....++.+|++ ||.||+||.++. ..+.+| .|..||.++. ++|+++-..||+||+.+|
T Consensus 150 ~~htDYVR~g~~~~~~~hivvtGsY-Dg~vrl~DtR~~~~~v~el-nhg~pVe~vl~lpsgs~iasAgGn~vkVWDl~~G 227 (487)
T KOG0310|consen 150 SGHTDYVRCGDISPANDHIVVTGSY-DGKVRLWDTRSLTSRVVEL-NHGCPVESVLALPSGSLIASAGGNSVKVWDLTTG 227 (487)
T ss_pred cCCcceeEeeccccCCCeEEEecCC-CceEEEEEeccCCceeEEe-cCCCceeeEEEcCCCCEEEEcCCCeEEEEEecCC
Confidence 3567789999999966666666777 999999999987 455556 4899999988 788887777999999877
Q ss_pred CceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 84 DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
..+...+..|. -.|.|+.+..++..+.|++-|+-++|||..+-+.+..+.++++|++++++|+
T Consensus 228 ~qll~~~~~H~--KtVTcL~l~s~~~rLlS~sLD~~VKVfd~t~~Kvv~s~~~~~pvLsiavs~d 290 (487)
T KOG0310|consen 228 GQLLTSMFNHN--KTVTCLRLASDSTRLLSGSLDRHVKVFDTTNYKVVHSWKYPGPVLSIAVSPD 290 (487)
T ss_pred ceehhhhhccc--ceEEEEEeecCCceEeecccccceEEEEccceEEEEeeecccceeeEEecCC
Confidence 64422222243 3588999999999999999999999999988999999999999999999995
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=7.5e-17 Score=136.34 Aligned_cols=136 Identities=13% Similarity=0.179 Sum_probs=112.0
Q ss_pred CCceeEEeec-CCCceEEEEcCCCCcceEEEEEcCCCC--ce--------eeee-ccCccceeee------eEEEecCCc
Q psy505 13 NPNGICCLCV-NSDNCYLAYPGSNSIGEVQIFDADNLH--AK--------TMIP-AHDSPLAALA------SLSVGTKSG 74 (161)
Q Consensus 13 ~~~~v~~~~~-~~d~~~la~~g~~~dg~v~iWd~~~~~--~~--------~~l~-~H~~~V~~l~------~lasgs~dg 74 (161)
|.+-|.++++ .++...+|++|. |+.|.|||++++. .+ ..+. ||..+|.+++ .+++|+-.+
T Consensus 116 H~DYVkcla~~ak~~~lvaSgGL--D~~IflWDin~~~~~l~~s~n~~t~~sl~sG~k~siYSLA~N~t~t~ivsGgtek 193 (735)
T KOG0308|consen 116 HKDYVKCLAYIAKNNELVASGGL--DRKIFLWDINTGTATLVASFNNVTVNSLGSGPKDSIYSLAMNQTGTIIVSGGTEK 193 (735)
T ss_pred ccchheeeeecccCceeEEecCC--CccEEEEEccCcchhhhhhccccccccCCCCCccceeeeecCCcceEEEecCccc
Confidence 4456788888 777778887776 9999999999872 22 2344 8999999999 788898888
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEE
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEE 152 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv 152 (161)
+|+||.++++.+.+ ++||+.. |..+..+++|.-+.|+++|++|++||+..++|+.++. |...|+++..+|+.-.+
T Consensus 194 ~lr~wDprt~~kimk-LrGHTdN--Vr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrCl~T~~vH~e~VWaL~~~~sf~~v 270 (735)
T KOG0308|consen 194 DLRLWDPRTCKKIMK-LRGHTDN--VRVLLVNDDGTRLLSASSDGTIRLWDLGQQRCLATYIVHKEGVWALQSSPSFTHV 270 (735)
T ss_pred ceEEeccccccceee-eeccccc--eEEEEEcCCCCeEeecCCCceEEeeeccccceeeeEEeccCceEEEeeCCCcceE
Confidence 99999999987754 4699864 6677889999999999999999999999999999986 77889999999874444
Q ss_pred E
Q psy505 153 E 153 (161)
Q Consensus 153 ~ 153 (161)
-
T Consensus 271 Y 271 (735)
T KOG0308|consen 271 Y 271 (735)
T ss_pred E
Confidence 3
|
|
| >KOG0310|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=5e-17 Score=133.43 Aligned_cols=140 Identities=14% Similarity=0.180 Sum_probs=104.6
Q ss_pred CCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEe
Q psy505 9 DTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 9 ~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~ 80 (161)
..|..| +...-|+|++..++++|+. |+.+++||+.++....++++|++.|+|.+ +++|||-|| ||+||+
T Consensus 107 ~ah~ap--v~~~~f~~~d~t~l~s~sD-d~v~k~~d~s~a~v~~~l~~htDYVR~g~~~~~~~hivvtGsYDg~vrl~Dt 183 (487)
T KOG0310|consen 107 YAHQAP--VHVTKFSPQDNTMLVSGSD-DKVVKYWDLSTAYVQAELSGHTDYVRCGDISPANDHIVVTGSYDGKVRLWDT 183 (487)
T ss_pred hhccCc--eeEEEecccCCeEEEecCC-CceEEEEEcCCcEEEEEecCCcceeEeeccccCCCeEEEecCCCceEEEEEe
Confidence 445566 4445556776666666774 89999999999887668999999999998 899999999 999999
Q ss_pred CCcC-ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC-CeEEEEE-ecCceEEEEECC--cEEEEEec
Q psy505 81 NSID-TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG-SEICNYS-FSNTILAVKLNR--KKEEEEDE 155 (161)
Q Consensus 81 ~~~~-~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~-~~i~~l~-~~~~V~~v~~~~--~~~vv~~~ 155 (161)
++-. ...++ .|. .+|..+.|=|++..++++++ +.+||||+-+| +.++.+. |..+|+++++.. .+|+...-
T Consensus 184 R~~~~~v~el--nhg--~pVe~vl~lpsgs~iasAgG-n~vkVWDl~~G~qll~~~~~H~KtVTcL~l~s~~~rLlS~sL 258 (487)
T KOG0310|consen 184 RSLTSRVVEL--NHG--CPVESVLALPSGSLIASAGG-NSVKVWDLTTGGQLLTSMFNHNKTVTCLRLASDSTRLLSGSL 258 (487)
T ss_pred ccCCceeEEe--cCC--CceeeEEEcCCCCEEEEcCC-CeEEEEEecCCceehhhhhcccceEEEEEeecCCceEeeccc
Confidence 8753 22222 233 34778888888777777654 67999999965 4556655 899999999987 46655443
Q ss_pred c
Q psy505 156 E 156 (161)
Q Consensus 156 ~ 156 (161)
|
T Consensus 259 D 259 (487)
T KOG0310|consen 259 D 259 (487)
T ss_pred c
Confidence 3
|
|
| >KOG0275|consensus | Back alignment and domain information |
|---|
Probab=99.73 E-value=3.6e-18 Score=135.40 Aligned_cols=136 Identities=13% Similarity=0.229 Sum_probs=115.1
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeee--------eccCccceeee------eEEEecCCc-eEEEEeC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMI--------PAHDSPLAALA------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l--------~~H~~~V~~l~------~lasgs~dg-iriwd~~ 81 (161)
+.+-.|+|||.+|+++ +. ||-|.+||..+|+..+.+ --|.++|.|++ +||+|+.|| ||+|.++
T Consensus 216 ~EcA~FSPDgqyLvsg-Sv-DGFiEVWny~~GKlrKDLkYQAqd~fMMmd~aVlci~FSRDsEMlAsGsqDGkIKvWri~ 293 (508)
T KOG0275|consen 216 VECARFSPDGQYLVSG-SV-DGFIEVWNYTTGKLRKDLKYQAQDNFMMMDDAVLCISFSRDSEMLASGSQDGKIKVWRIE 293 (508)
T ss_pred hhheeeCCCCceEeec-cc-cceeeeehhccchhhhhhhhhhhcceeecccceEEEeecccHHHhhccCcCCcEEEEEEe
Confidence 3355678999999985 43 999999999999865543 45788999998 999999999 9999999
Q ss_pred CcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+|.+++++-+.|+. .+.++.||.+...+.|++-|.+++|--++.|+++.++. |.+.|..+.|++| +++.+..|
T Consensus 294 tG~ClRrFdrAHtk--Gvt~l~FSrD~SqiLS~sfD~tvRiHGlKSGK~LKEfrGHsSyvn~a~ft~dG~~iisaSsD 369 (508)
T KOG0275|consen 294 TGQCLRRFDRAHTK--GVTCLSFSRDNSQILSASFDQTVRIHGLKSGKCLKEFRGHSSYVNEATFTDDGHHIISASSD 369 (508)
T ss_pred cchHHHHhhhhhcc--CeeEEEEccCcchhhcccccceEEEeccccchhHHHhcCccccccceEEcCCCCeEEEecCC
Confidence 99998777667764 47788999999989999999999999999999999997 6889999999998 45544433
|
|
| >KOG0291|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.7e-16 Score=136.09 Aligned_cols=147 Identities=14% Similarity=0.227 Sum_probs=122.9
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-e
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-Y 75 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-i 75 (161)
++|.+ ....++ +..+++|..|.+||.+++. -|.+-||+.++..-+-..+||...+++++ ++|+|++|| |
T Consensus 299 lih~L-Sis~~~--I~t~~~N~tGDWiA~g~~k-lgQLlVweWqsEsYVlKQQgH~~~i~~l~YSpDgq~iaTG~eDgKV 374 (893)
T KOG0291|consen 299 LIHSL-SISDQK--ILTVSFNSTGDWIAFGCSK-LGQLLVWEWQSESYVLKQQGHSDRITSLAYSPDGQLIATGAEDGKV 374 (893)
T ss_pred EEEEe-ecccce--eeEEEecccCCEEEEcCCc-cceEEEEEeeccceeeeccccccceeeEEECCCCcEEEeccCCCcE
Confidence 56666 333343 7788888889999998874 78999999999999999999999999999 999999999 9
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecC--ceEEEEECCcEEEEE
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSN--TILAVKLNRKKEEEE 153 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~--~V~~v~~~~~~~vv~ 153 (161)
||||..+|-|+ -+|..|+++ +..+.|+.++..++|.+-|++|+.||+++.++-.++..+. +-.+|+..|.+.+|+
T Consensus 375 KvWn~~SgfC~-vTFteHts~--Vt~v~f~~~g~~llssSLDGtVRAwDlkRYrNfRTft~P~p~QfscvavD~sGelV~ 451 (893)
T KOG0291|consen 375 KVWNTQSGFCF-VTFTEHTSG--VTAVQFTARGNVLLSSSLDGTVRAWDLKRYRNFRTFTSPEPIQFSCVAVDPSGELVC 451 (893)
T ss_pred EEEeccCceEE-EEeccCCCc--eEEEEEEecCCEEEEeecCCeEEeeeecccceeeeecCCCceeeeEEEEcCCCCEEE
Confidence 99999998776 567778754 6667788888888888899999999999999999998765 456688888877776
Q ss_pred ecc
Q psy505 154 DEE 156 (161)
Q Consensus 154 ~~~ 156 (161)
-..
T Consensus 452 AG~ 454 (893)
T KOG0291|consen 452 AGA 454 (893)
T ss_pred eec
Confidence 554
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=1.2e-16 Score=128.20 Aligned_cols=142 Identities=15% Similarity=0.217 Sum_probs=113.3
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-e
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-Y 75 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-i 75 (161)
++-++ ++|..+ |.++.+.+ ...+++++. |-+||.||+.+++++.++.+. .+++|+. +||+||.|. +
T Consensus 252 P~vtl-~GHt~~--Vs~V~w~d--~~v~yS~Sw-DHTIk~WDletg~~~~~~~~~-ksl~~i~~~~~~~Ll~~gssdr~i 324 (423)
T KOG0313|consen 252 PLVTL-EGHTEP--VSSVVWSD--ATVIYSVSW-DHTIKVWDLETGGLKSTLTTN-KSLNCISYSPLSKLLASGSSDRHI 324 (423)
T ss_pred ceEEe-cccccc--eeeEEEcC--CCceEeecc-cceEEEEEeecccceeeeecC-cceeEeecccccceeeecCCCCce
Confidence 34566 555554 77888866 345566665 999999999999999888874 5577877 999999999 9
Q ss_pred EEEEeCCcC--ceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCC-eEEEEE-ecCceEEEEECCcEE
Q psy505 76 RLFSLNSID--TLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGS-EICNYS-FSNTILAVKLNRKKE 150 (161)
Q Consensus 76 riwd~~~~~--~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~-~i~~l~-~~~~V~~v~~~~~~~ 150 (161)
|+||.+++. .....+.||.+ +|.++.++| +-+.++|++-||++|+||++..+ .+..+. |.+.|+++.|+...+
T Consensus 325 rl~DPR~~~gs~v~~s~~gH~n--wVssvkwsp~~~~~~~S~S~D~t~klWDvRS~k~plydI~~h~DKvl~vdW~~~~~ 402 (423)
T KOG0313|consen 325 RLWDPRTGDGSVVSQSLIGHKN--WVSSVKWSPTNEFQLVSGSYDNTVKLWDVRSTKAPLYDIAGHNDKVLSVDWNEGGL 402 (423)
T ss_pred eecCCCCCCCceeEEeeecchh--hhhheecCCCCceEEEEEecCCeEEEEEeccCCCcceeeccCCceEEEEeccCCce
Confidence 999998864 44456678875 678888997 67788999999999999999987 777775 789999999998855
Q ss_pred EEE
Q psy505 151 EEE 153 (161)
Q Consensus 151 vv~ 153 (161)
+|-
T Consensus 403 IvS 405 (423)
T KOG0313|consen 403 IVS 405 (423)
T ss_pred EEe
Confidence 543
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.72 E-value=7.7e-18 Score=143.61 Aligned_cols=134 Identities=10% Similarity=0.176 Sum_probs=114.3
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+..+|.++-|+++..+|+.+.. ||+||+||+..++.+++|.||..++.+|. ++|+||.|+ +++||.+.-.+
T Consensus 69 hespIeSl~f~~~E~Llaagsa--sgtiK~wDleeAk~vrtLtgh~~~~~sv~f~P~~~~~a~gStdtd~~iwD~Rk~Gc 146 (825)
T KOG0267|consen 69 HESPIESLTFDTSERLLAAGSA--SGTIKVWDLEEAKIVRTLTGHLLNITSVDFHPYGEFFASGSTDTDLKIWDIRKKGC 146 (825)
T ss_pred cCCcceeeecCcchhhhccccc--CCceeeeehhhhhhhhhhhccccCcceeeeccceEEeccccccccceehhhhccCc
Confidence 4456888889888877776443 99999999999999999999999999999 889999999 99999985333
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEE
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEE 151 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~v 151 (161)
. ..+.+|.. .+..+.|+|+|.+++++.+|++++|||...|+.+.+|. |...|.++.|+|-...
T Consensus 147 ~-~~~~s~~~--vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~~ef~~~e~~v~sle~hp~e~L 210 (825)
T KOG0267|consen 147 S-HTYKSHTR--VVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLSKEFKSHEGKVQSLEFHPLEVL 210 (825)
T ss_pred e-eeecCCcc--eeEEEeecCCCceeeccCCcceeeeecccccccccccccccccccccccCchhhh
Confidence 3 56777754 35677899999999999999999999999999999997 7789999999886443
|
|
| >PLN00181 protein SPA1-RELATED; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=4.5e-16 Score=138.73 Aligned_cols=135 Identities=19% Similarity=0.243 Sum_probs=107.1
Q ss_pred eeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCce
Q psy505 16 GICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 16 ~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~ 86 (161)
.+.+++++| ++.++|+++. ||+|+|||+.+++.+..+.+|.+.|++++ +|++|+.|| |++||++++..+
T Consensus 534 ~v~~l~~~~~~~~~las~~~--Dg~v~lWd~~~~~~~~~~~~H~~~V~~l~~~p~~~~~L~Sgs~Dg~v~iWd~~~~~~~ 611 (793)
T PLN00181 534 KLSGICWNSYIKSQVASSNF--EGVVQVWDVARSQLVTEMKEHEKRVWSIDYSSADPTLLASGSDDGSVKLWSINQGVSI 611 (793)
T ss_pred ceeeEEeccCCCCEEEEEeC--CCeEEEEECCCCeEEEEecCCCCCEEEEEEcCCCCCEEEEEcCCCEEEEEECCCCcEE
Confidence 466778876 4678888775 99999999999999999999999999997 799999999 999999988765
Q ss_pred eeEEeecCcceEEEEEeec-CCeEEEEecCCCCeEEEEecCCCC-eEEEEE-ecCceEEEEECCc-EEEEEecc
Q psy505 87 EQIYENSQEDVCIVERLFS-SSLVAVVSLSSPRKLTVCHFKRGS-EICNYS-FSNTILAVKLNRK-KEEEEDEE 156 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs-~~~~~~~s~~~d~~i~iWD~~~~~-~i~~l~-~~~~V~~v~~~~~-~~vv~~~~ 156 (161)
. .+..+. .+.++.|+ +++..+++|+.|+.|++||+++++ .+..+. |...|.+++|.+. .++.+..|
T Consensus 612 ~-~~~~~~---~v~~v~~~~~~g~~latgs~dg~I~iwD~~~~~~~~~~~~~h~~~V~~v~f~~~~~lvs~s~D 681 (793)
T PLN00181 612 G-TIKTKA---NICCVQFPSESGRSLAFGSADHKVYYYDLRNPKLPLCTMIGHSKTVSYVRFVDSSTLVSSSTD 681 (793)
T ss_pred E-EEecCC---CeEEEEEeCCCCCEEEEEeCCCeEEEEECCCCCccceEecCCCCCEEEEEEeCCCEEEEEECC
Confidence 3 444432 36677885 567788888899999999998865 455554 6789999999654 55555544
|
|
| >PTZ00420 coronin; Provisional | Back alignment and domain information |
|---|
Probab=99.71 E-value=1.1e-15 Score=131.42 Aligned_cols=115 Identities=14% Similarity=0.174 Sum_probs=94.6
Q ss_pred cCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCc-e------eeEEeecCcc
Q psy505 32 PGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDT-L------EQIYENSQED 96 (161)
Q Consensus 32 ~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~-~------~~~~~~~~~~ 96 (161)
+|+. +|.|++|+.....++..+.+|.++|.+++ +||||+.|| |||||+.++.. . ...+.+|..
T Consensus 49 gGG~-~gvI~L~~~~r~~~v~~L~gH~~~V~~lafsP~~~~lLASgS~DgtIrIWDi~t~~~~~~~i~~p~~~L~gH~~- 126 (568)
T PTZ00420 49 GGGL-IGAIRLENQMRKPPVIKLKGHTSSILDLQFNPCFSEILASGSEDLTIRVWEIPHNDESVKEIKDPQCILKGHKK- 126 (568)
T ss_pred CCCc-eeEEEeeecCCCceEEEEcCCCCCEEEEEEcCCCCCEEEEEeCCCeEEEEECCCCCccccccccceEEeecCCC-
Confidence 4443 89999999988888899999999999998 899999999 99999976431 1 124567764
Q ss_pred eEEEEEeecCCeE-EEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcE
Q psy505 97 VCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 97 ~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~ 149 (161)
.|.+++|+|++. .+++++.|++|+|||+++++.+..+.+...|.++.|+|++
T Consensus 127 -~V~sVaf~P~g~~iLaSgS~DgtIrIWDl~tg~~~~~i~~~~~V~SlswspdG 179 (568)
T PTZ00420 127 -KISIIDWNPMNYYIMCSSGFDSFVNIWDIENEKRAFQINMPKKLSSLKWNIKG 179 (568)
T ss_pred -cEEEEEECCCCCeEEEEEeCCCeEEEEECCCCcEEEEEecCCcEEEEEECCCC
Confidence 477889999764 4567778999999999999988888888899999999973
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.71 E-value=2.6e-16 Score=126.33 Aligned_cols=140 Identities=11% Similarity=0.214 Sum_probs=106.1
Q ss_pred CcceEEecCCCCCCceeEEeecCC--CceEEEEcCCCCcceEEEEEcCCCCc---eeeeeccCccceeee-------eEE
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNS--DNCYLAYPGSNSIGEVQIFDADNLHA---KTMIPAHDSPLAALA-------SLS 68 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~--d~~~la~~g~~~dg~v~iWd~~~~~~---~~~l~~H~~~V~~l~-------~la 68 (161)
+++|++. ..+.- . =+++.++| .| .|++ |.. -+.|++|...+|.- ...|.+|+..|.+|+ .||
T Consensus 201 ~~Pl~t~-~ghk~-E-Gy~LdWSp~~~g-~Lls-GDc-~~~I~lw~~~~g~W~vd~~Pf~gH~~SVEDLqWSptE~~vfa 274 (440)
T KOG0302|consen 201 FRPLFTF-NGHKG-E-GYGLDWSPIKTG-RLLS-GDC-VKGIHLWEPSTGSWKVDQRPFTGHTKSVEDLQWSPTEDGVFA 274 (440)
T ss_pred cCceEEe-cccCc-c-ceeeeccccccc-cccc-Ccc-ccceEeeeeccCceeecCccccccccchhhhccCCccCceEE
Confidence 4677888 55552 2 34777777 33 2444 432 57899999999863 245789999999999 899
Q ss_pred EecCCc-eEEEEeCCcCce-eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCC---CCeEEEEEe-cCceEE
Q psy505 69 VGTKSG-YRLFSLNSIDTL-EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR---GSEICNYSF-SNTILA 142 (161)
Q Consensus 69 sgs~dg-iriwd~~~~~~~-~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~---~~~i~~l~~-~~~V~~ 142 (161)
|||-|| |||||++++..- ..+...|.+.+.++ .|+.+.-.++||++|++++|||+++ ++++.++.+ ..+|.+
T Consensus 275 ScS~DgsIrIWDiRs~~~~~~~~~kAh~sDVNVI--SWnr~~~lLasG~DdGt~~iwDLR~~~~~~pVA~fk~Hk~pIts 352 (440)
T KOG0302|consen 275 SCSCDGSIRIWDIRSGPKKAAVSTKAHNSDVNVI--SWNRREPLLASGGDDGTLSIWDLRQFKSGQPVATFKYHKAPITS 352 (440)
T ss_pred eeecCceEEEEEecCCCccceeEeeccCCceeeE--EccCCcceeeecCCCceEEEEEhhhccCCCcceeEEeccCCeeE
Confidence 999999 999999998322 12345666665554 5887777899999999999999886 678889985 789999
Q ss_pred EEECCc
Q psy505 143 VKLNRK 148 (161)
Q Consensus 143 v~~~~~ 148 (161)
|+|+|.
T Consensus 353 ieW~p~ 358 (440)
T KOG0302|consen 353 IEWHPH 358 (440)
T ss_pred EEeccc
Confidence 999984
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.5e-16 Score=121.16 Aligned_cols=128 Identities=12% Similarity=0.144 Sum_probs=102.4
Q ss_pred eeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCce
Q psy505 16 GICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 16 ~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~ 86 (161)
-|+++-.++ ++..+++++. ||+|||||..-.+.+.+|.||.+-|.... +||++|.|| .||||++.....
T Consensus 106 EV~Svdwn~~~r~~~ltsSW--D~TiKLW~~~r~~Sv~Tf~gh~~~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~ 183 (311)
T KOG0277|consen 106 EVYSVDWNTVRRRIFLTSSW--DGTIKLWDPNRPNSVQTFNGHNSCIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKF 183 (311)
T ss_pred heEEeccccccceeEEeecc--CCceEeecCCCCcceEeecCCccEEEEEecCCCCCCeEEEccCCceEEEEEecCCCce
Confidence 477888776 4556666544 99999999999999999999999999888 999999999 999999875433
Q ss_pred eeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCC-CCeEEEEE-ecCceEEEEECCc
Q psy505 87 EQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKR-GSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~-~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
..+.-|. ..+.++.|+. |-..+++++-|+.|+.||++. +.++.++. |.=.|..|+|||-
T Consensus 184 -~~i~ah~--~Eil~cdw~ky~~~vl~Tg~vd~~vr~wDir~~r~pl~eL~gh~~AVRkvk~Sph 245 (311)
T KOG0277|consen 184 -MSIEAHN--SEILCCDWSKYNHNVLATGGVDNLVRGWDIRNLRTPLFELNGHGLAVRKVKFSPH 245 (311)
T ss_pred -eEEEecc--ceeEeecccccCCcEEEecCCCceEEEEehhhccccceeecCCceEEEEEecCcc
Confidence 3466665 4577888874 556678888899999999987 45666664 4568999999995
|
|
| >KOG0265|consensus | Back alignment and domain information |
|---|
Probab=99.70 E-value=2.4e-16 Score=123.41 Aligned_cols=141 Identities=10% Similarity=0.142 Sum_probs=118.5
Q ss_pred CCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeC
Q psy505 9 DTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 9 ~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~ 81 (161)
.+-.+...+.+|.|+.++..+.++|. |+.|++||++.....+++.||.++|..++ ++.+-+.|. +|+||++
T Consensus 169 ~t~~~kyqltAv~f~d~s~qv~sggI--dn~ikvWd~r~~d~~~~lsGh~DtIt~lsls~~gs~llsnsMd~tvrvwd~r 246 (338)
T KOG0265|consen 169 KTFENKYQLTAVGFKDTSDQVISGGI--DNDIKVWDLRKNDGLYTLSGHADTITGLSLSRYGSFLLSNSMDNTVRVWDVR 246 (338)
T ss_pred hccccceeEEEEEecccccceeeccc--cCceeeeccccCcceEEeecccCceeeEEeccCCCccccccccceEEEEEec
Confidence 35567778999999988889998887 99999999999999999999999999999 888999999 9999986
Q ss_pred C---cCceeeEEeecCcce--EEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEE
Q psy505 82 S---IDTLEQIYENSQEDV--CIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEE 151 (161)
Q Consensus 82 ~---~~~~~~~~~~~~~~~--~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~v 151 (161)
. ++.+..+++||.+.. .....+++|++..+..++.|+.+.+||....+++-.+. |...|..++|+|..-+
T Consensus 247 p~~p~~R~v~if~g~~hnfeknlL~cswsp~~~~i~ags~dr~vyvwd~~~r~~lyklpGh~gsvn~~~Fhp~e~i 322 (338)
T KOG0265|consen 247 PFAPSQRCVKIFQGHIHNFEKNLLKCSWSPNGTKITAGSADRFVYVWDTTSRRILYKLPGHYGSVNEVDFHPTEPI 322 (338)
T ss_pred ccCCCCceEEEeecchhhhhhhcceeeccCCCCccccccccceEEEeecccccEEEEcCCcceeEEEeeecCCCcE
Confidence 3 344446888876432 23456799999999999999999999999888877775 5789999999998433
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=7e-16 Score=121.53 Aligned_cols=143 Identities=16% Similarity=0.219 Sum_probs=115.5
Q ss_pred CCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------eEEEecCCc-eEEEE
Q psy505 9 DTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 9 ~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd 79 (161)
..+.|...+.++|. +|.++|++|+ |-+|+|||++.++.+..+--|.+.|+++. .|.+|++|| |.+|+
T Consensus 38 ~~~aH~~sitavAV--s~~~~aSGss--DetI~IYDm~k~~qlg~ll~HagsitaL~F~~~~S~shLlS~sdDG~i~iw~ 113 (362)
T KOG0294|consen 38 AFSAHAGSITALAV--SGPYVASGSS--DETIHIYDMRKRKQLGILLSHAGSITALKFYPPLSKSHLLSGSDDGHIIIWR 113 (362)
T ss_pred cccccccceeEEEe--cceeEeccCC--CCcEEEEeccchhhhcceeccccceEEEEecCCcchhheeeecCCCcEEEEE
Confidence 34456667888888 7899998776 99999999999999999999999999998 688999999 99999
Q ss_pred eCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEeccc
Q psy505 80 LNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEEDEEE 157 (161)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~~~~ 157 (161)
+...+.+ ..+.+|.+. |..++-+|.+....|-+.|+.++.||+-+|+.-..+.....-..|.|+|. +++|...++
T Consensus 114 ~~~W~~~-~slK~H~~~--Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~ 190 (362)
T KOG0294|consen 114 VGSWELL-KSLKAHKGQ--VTDLSIHPSGKLALSVGGDQVLRTWNLVRGRVAFVLNLKNKATLVSWSPQGDHFVVSGRNK 190 (362)
T ss_pred cCCeEEe-eeecccccc--cceeEecCCCceEEEEcCCceeeeehhhcCccceeeccCCcceeeEEcCCCCEEEEEeccE
Confidence 9887655 677888865 66777777666555556789999999999986554444444444999885 789998887
Q ss_pred e
Q psy505 158 E 158 (161)
Q Consensus 158 ~ 158 (161)
|
T Consensus 191 i 191 (362)
T KOG0294|consen 191 I 191 (362)
T ss_pred E
Confidence 6
|
|
| >KOG0316|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=7.7e-16 Score=117.57 Aligned_cols=146 Identities=16% Similarity=0.264 Sum_probs=112.0
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-e
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-Y 75 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-i 75 (161)
||+|. .+|.+. |..++.+.|...++++|. |..|.+||+++|+.+..|.+|...|+.+. .++|||.|. +
T Consensus 51 liktY-sghG~E--VlD~~~s~Dnskf~s~Gg--Dk~v~vwDV~TGkv~Rr~rgH~aqVNtV~fNeesSVv~SgsfD~s~ 125 (307)
T KOG0316|consen 51 LIKTY-SGHGHE--VLDAALSSDNSKFASCGG--DKAVQVWDVNTGKVDRRFRGHLAQVNTVRFNEESSVVASGSFDSSV 125 (307)
T ss_pred eeeee-cCCCce--eeeccccccccccccCCC--CceEEEEEcccCeeeeecccccceeeEEEecCcceEEEecccccee
Confidence 67888 666665 666666678889998887 99999999999999999999999999999 899999999 9
Q ss_pred EEEEeCCc--CceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc---EE
Q psy505 76 RLFSLNSI--DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK---KE 150 (161)
Q Consensus 76 riwd~~~~--~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~---~~ 150 (161)
|+||.++. +|+ +++....+. |.++..+.. .++.|+-|++++.||++.|+....+ +..+|.++.|+|+ -|
T Consensus 126 r~wDCRS~s~ePi-Qildea~D~--V~Si~v~~h--eIvaGS~DGtvRtydiR~G~l~sDy-~g~pit~vs~s~d~nc~L 199 (307)
T KOG0316|consen 126 RLWDCRSRSFEPI-QILDEAKDG--VSSIDVAEH--EIVAGSVDGTVRTYDIRKGTLSSDY-FGHPITSVSFSKDGNCSL 199 (307)
T ss_pred EEEEcccCCCCcc-chhhhhcCc--eeEEEeccc--EEEeeccCCcEEEEEeecceeehhh-cCCcceeEEecCCCCEEE
Confidence 99999864 333 333222233 444444433 3566778999999999999854333 4689999999998 56
Q ss_pred EEEecccee
Q psy505 151 EEEDEEEEK 159 (161)
Q Consensus 151 vv~~~~~~~ 159 (161)
+-+++..+|
T Consensus 200 a~~l~stlr 208 (307)
T KOG0316|consen 200 ASSLDSTLR 208 (307)
T ss_pred Eeeccceee
Confidence 666666554
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.2e-16 Score=124.98 Aligned_cols=135 Identities=17% Similarity=0.208 Sum_probs=105.4
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+..++.+.+|||||.+++++.. ||.|+|||+.++..+..|.+|+++|+.++ +||++++|+ |++||+|.-+.
T Consensus 346 s~v~~ts~~fHpDgLifgtgt~--d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~~V~lwDLRKl~n 423 (506)
T KOG0289|consen 346 SDVEYTSAAFHPDGLIFGTGTP--DGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDGSVKLWDLRKLKN 423 (506)
T ss_pred ccceeEEeeEcCCceEEeccCC--CceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCCeEEEEEehhhcc
Confidence 4456889999999999888554 99999999999999999999999999999 999999999 99999987665
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecC----CCCeEEEEE-ecCceEEEEECCcEEEEE
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK----RGSEICNYS-FSNTILAVKLNRKKEEEE 153 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~----~~~~i~~l~-~~~~V~~v~~~~~~~vv~ 153 (161)
+. .+.-.. ...+.++.|...|.+++.++. .|+||-.+ ..+++.++. +.+....|+|+....+++
T Consensus 424 ~k-t~~l~~-~~~v~s~~fD~SGt~L~~~g~--~l~Vy~~~k~~k~W~~~~~~~~~sg~st~v~Fg~~aq~l~ 492 (506)
T KOG0289|consen 424 FK-TIQLDE-KKEVNSLSFDQSGTYLGIAGS--DLQVYICKKKTKSWTEIKELADHSGLSTGVRFGEHAQYLA 492 (506)
T ss_pred cc-eeeccc-cccceeEEEcCCCCeEEeecc--eeEEEEEecccccceeeehhhhcccccceeeecccceEEe
Confidence 53 443333 224778889888888887755 56666555 456666665 556899999987644433
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=1.1e-15 Score=125.16 Aligned_cols=134 Identities=16% Similarity=0.286 Sum_probs=107.6
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCC----
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNS---- 82 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~---- 82 (161)
|.-+.+++-+|+|.+++.++. .|.+.+|.+.+|+.+..+.+|..+|+|+. +|.|||.|| |.+|++..
T Consensus 81 Pg~v~al~s~n~G~~l~ag~i--~g~lYlWelssG~LL~v~~aHYQ~ITcL~fs~dgs~iiTgskDg~V~vW~l~~lv~a 158 (476)
T KOG0646|consen 81 PGPVHALASSNLGYFLLAGTI--SGNLYLWELSSGILLNVLSAHYQSITCLKFSDDGSHIITGSKDGAVLVWLLTDLVSA 158 (476)
T ss_pred ccceeeeecCCCceEEEeecc--cCcEEEEEeccccHHHHHHhhccceeEEEEeCCCcEEEecCCCccEEEEEEEeeccc
Confidence 444778998999999998666 79999999999999999999999999999 999999999 99998631
Q ss_pred -----cCceeeEEeecCcceEEEEE--eecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEE
Q psy505 83 -----IDTLEQIYENSQEDVCIVER--LFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEE 152 (161)
Q Consensus 83 -----~~~~~~~~~~~~~~~~v~~~--~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv 152 (161)
-+++ ..|.+|+ ..|..+ .+.+-.-.+.+.+.|+++|+||+..|..+.++.|+..+.+++++|-.-++
T Consensus 159 ~~~~~~~p~-~~f~~Ht--lsITDl~ig~Gg~~~rl~TaS~D~t~k~wdlS~g~LLlti~fp~si~av~lDpae~~~ 232 (476)
T KOG0646|consen 159 DNDHSVKPL-HIFSDHT--LSITDLQIGSGGTNARLYTASEDRTIKLWDLSLGVLLLTITFPSSIKAVALDPAERVV 232 (476)
T ss_pred ccCCCccce-eeeccCc--ceeEEEEecCCCccceEEEecCCceEEEEEeccceeeEEEecCCcceeEEEcccccEE
Confidence 1233 3455565 345554 44433344666678999999999999999999999999999999964333
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.69 E-value=9.8e-16 Score=128.39 Aligned_cols=137 Identities=16% Similarity=0.212 Sum_probs=115.8
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEec--CCc-eEEEEeCC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGT--KSG-YRLFSLNS 82 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs--~dg-iriwd~~~ 82 (161)
|..-||.+.+++|+.++|++|. |..+.|||..+..++..+..|...|..++ +||+|+ .|+ ||+||+.+
T Consensus 300 H~qeVCgLkws~d~~~lASGgn--DN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP~q~~lLAsGGGs~D~~i~fwn~~~ 377 (484)
T KOG0305|consen 300 HRQEVCGLKWSPDGNQLASGGN--DNVVFIWDGLSPEPKFTFTEHTAAVKALAWCPWQSGLLATGGGSADRCIKFWNTNT 377 (484)
T ss_pred ccceeeeeEECCCCCeeccCCC--ccceEeccCCCccccEEEeccceeeeEeeeCCCccCceEEcCCCcccEEEEEEcCC
Confidence 4556999999999999999775 99999999988899999999999999999 899876 577 99999999
Q ss_pred cCceeeEEeecCcceEEEEEeecCCe--EEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEec
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSL--VAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDE 155 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~--~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~ 155 (161)
|.++..+..+ ..|.++.|++.. ++..-|+.++.|.||+..+-+.+..+. |...|+.+++||| .++++-.
T Consensus 378 g~~i~~vdtg----sQVcsL~Wsk~~kEi~sthG~s~n~i~lw~~ps~~~~~~l~gH~~RVl~la~SPdg~~i~t~a~ 451 (484)
T KOG0305|consen 378 GARIDSVDTG----SQVCSLIWSKKYKELLSTHGYSENQITLWKYPSMKLVAELLGHTSRVLYLALSPDGETIVTGAA 451 (484)
T ss_pred CcEecccccC----CceeeEEEcCCCCEEEEecCCCCCcEEEEeccccceeeeecCCcceeEEEEECCCCCEEEEecc
Confidence 9876544433 358999999977 555557888999999999988888876 7899999999998 4444433
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=1.4e-16 Score=127.51 Aligned_cols=144 Identities=15% Similarity=0.234 Sum_probs=104.5
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCce
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~ 86 (161)
.|.+||.+|+.+|.....+++|+. ||.|+|||+.++.|..+|++|.+.|++++ .+.++++|. +|.|-..- .++
T Consensus 64 gHrdGV~~lakhp~~ls~~aSGs~-DG~VkiWnlsqR~~~~~f~AH~G~V~Gi~v~~~~~~tvgdDKtvK~wk~~~-~p~ 141 (433)
T KOG0268|consen 64 GHRDGVSCLAKHPNKLSTVASGSC-DGEVKIWNLSQRECIRTFKAHEGLVRGICVTQTSFFTVGDDKTVKQWKIDG-PPL 141 (433)
T ss_pred ccccccchhhcCcchhhhhhcccc-CceEEEEehhhhhhhheeecccCceeeEEecccceEEecCCcceeeeeccC-Ccc
Confidence 466799999999987444445665 99999999999999999999999999999 555666666 88886321 111
Q ss_pred e---------------------------eEEee-cC--------cceEEEEEeecCCe-EEEEecCCCCeEEEEecCCCC
Q psy505 87 E---------------------------QIYEN-SQ--------EDVCIVERLFSSSL-VAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 87 ~---------------------------~~~~~-~~--------~~~~v~~~~fs~~~-~~~~s~~~d~~i~iWD~~~~~ 129 (161)
. .++.. +. +.-++.++.|+|.. ..++++.+|++|.|||.++++
T Consensus 142 ~tilg~s~~~gIdh~~~~~~FaTcGe~i~IWD~~R~~Pv~smswG~Dti~svkfNpvETsILas~~sDrsIvLyD~R~~~ 221 (433)
T KOG0268|consen 142 HTILGKSVYLGIDHHRKNSVFATCGEQIDIWDEQRDNPVSSMSWGADSISSVKFNPVETSILASCASDRSIVLYDLRQAS 221 (433)
T ss_pred eeeeccccccccccccccccccccCceeeecccccCCccceeecCCCceeEEecCCCcchheeeeccCCceEEEecccCC
Confidence 0 01100 00 11235566677733 346677789999999999999
Q ss_pred eEEEEEecCceEEEEECCcEEEEEeccc
Q psy505 130 EICNYSFSNTILAVKLNRKKEEEEDEEE 157 (161)
Q Consensus 130 ~i~~l~~~~~V~~v~~~~~~~vv~~~~~ 157 (161)
++..+.-.-.-+.+.|||+....+..++
T Consensus 222 Pl~KVi~~mRTN~IswnPeafnF~~a~E 249 (433)
T KOG0268|consen 222 PLKKVILTMRTNTICWNPEAFNFVAANE 249 (433)
T ss_pred ccceeeeeccccceecCccccceeeccc
Confidence 9998887777888999998666655543
|
|
| >KOG0277|consensus | Back alignment and domain information |
|---|
Probab=99.68 E-value=9e-16 Score=118.14 Aligned_cols=138 Identities=14% Similarity=0.228 Sum_probs=100.5
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCC-CCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcC
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-LHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~ 84 (161)
.+|++.++.+++...++.+.+. ||++||||+.- .++++.++.|+.+|.++. .+.++|.|| ||||+....+
T Consensus 60 ~D~LfdV~Wse~~e~~~~~a~G-DGSLrl~d~~~~s~Pi~~~kEH~~EV~Svdwn~~~r~~~ltsSWD~TiKLW~~~r~~ 138 (311)
T KOG0277|consen 60 EDGLFDVAWSENHENQVIAASG-DGSLRLFDLTMPSKPIHKFKEHKREVYSVDWNTVRRRIFLTSSWDGTIKLWDPNRPN 138 (311)
T ss_pred ccceeEeeecCCCcceEEEEec-CceEEEeccCCCCcchhHHHhhhhheEEeccccccceeEEeeccCCceEeecCCCCc
Confidence 3577788887744333332332 99999999653 358899999999999998 677779999 9999997766
Q ss_pred ceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCC-CCeEEEEEecCceEEEEECC-cEEEEEec
Q psy505 85 TLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKR-GSEICNYSFSNTILAVKLNR-KKEEEEDE 155 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~-~~~i~~l~~~~~V~~v~~~~-~~~vv~~~ 155 (161)
-+ +++.||.+ -|....|+| ..-.++|.++|+++++||++. |+.+.-..|..+++++.||+ +..++++.
T Consensus 139 Sv-~Tf~gh~~--~Iy~a~~sp~~~nlfas~Sgd~~l~lwdvr~~gk~~~i~ah~~Eil~cdw~ky~~~vl~Tg 209 (311)
T KOG0277|consen 139 SV-QTFNGHNS--CIYQAAFSPHIPNLFASASGDGTLRLWDVRSPGKFMSIEAHNSEILCCDWSKYNHNVLATG 209 (311)
T ss_pred ce-EeecCCcc--EEEEEecCCCCCCeEEEccCCceEEEEEecCCCceeEEEeccceeEeecccccCCcEEEec
Confidence 56 57888864 577888986 222345555688999999876 66665334678999999977 35555544
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=5.5e-16 Score=122.74 Aligned_cols=125 Identities=13% Similarity=0.191 Sum_probs=105.2
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcce
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDV 97 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~ 97 (161)
.|..+++++. |.+..+||+++|..++.|.||.++.+-++ ++.++|.|. +|+||.+..-+-...|+||.+.
T Consensus 283 gg~Q~vTaSW--DRTAnlwDVEtge~v~~LtGHd~ELtHcstHptQrLVvTsSrDtTFRLWDFReaI~sV~VFQGHtdt- 359 (481)
T KOG0300|consen 283 GGQQMVTASW--DRTANLWDVETGEVVNILTGHDSELTHCSTHPTQRLVVTSSRDTTFRLWDFREAIQSVAVFQGHTDT- 359 (481)
T ss_pred Ccceeeeeec--cccceeeeeccCceeccccCcchhccccccCCcceEEEEeccCceeEeccchhhcceeeeecccccc-
Confidence 5667777666 99999999999999999999999999887 888999999 9999998654445789999864
Q ss_pred EEEEEeecCCeEEEEecCCCCeEEEEecCCC-CeEEEEEecCceEEEEECCcEEEEEe
Q psy505 98 CIVERLFSSSLVAVVSLSSPRKLTVCHFKRG-SEICNYSFSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 98 ~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~-~~i~~l~~~~~V~~v~~~~~~~vv~~ 154 (161)
+.+..|..+.. ++||++|++|||||++.- .++.++.-.++++.++.+....++++
T Consensus 360 -VTS~vF~~dd~-vVSgSDDrTvKvWdLrNMRsplATIRtdS~~NRvavs~g~~iIAi 415 (481)
T KOG0300|consen 360 -VTSVVFNTDDR-VVSGSDDRTVKVWDLRNMRSPLATIRTDSPANRVAVSKGHPIIAI 415 (481)
T ss_pred -eeEEEEecCCc-eeecCCCceEEEeeeccccCcceeeecCCccceeEeecCCceEEe
Confidence 67788988776 688899999999999974 56778888899999999888755554
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=7.3e-16 Score=125.53 Aligned_cols=127 Identities=10% Similarity=0.164 Sum_probs=99.0
Q ss_pred EEeecCCCc-eEEEEcCCCCcceEEEEEcCCCC-------ceeeeeccCccceeee-------eEEEecCCc-eEEEEeC
Q psy505 18 CCLCVNSDN-CYLAYPGSNSIGEVQIFDADNLH-------AKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 18 ~~~~~~~d~-~~la~~g~~~dg~v~iWd~~~~~-------~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~ 81 (161)
++|++++.. -+|++++. |++|.+||+.... +...+.+|++.|.+++ +|+++++|+ +.|||+|
T Consensus 181 ~glsWn~~~~g~Lls~~~--d~~i~lwdi~~~~~~~~~~~p~~~~~~h~~~VeDV~~h~~h~~lF~sv~dd~~L~iwD~R 258 (422)
T KOG0264|consen 181 YGLSWNRQQEGTLLSGSD--DHTICLWDINAESKEDKVVDPKTIFSGHEDVVEDVAWHPLHEDLFGSVGDDGKLMIWDTR 258 (422)
T ss_pred cccccccccceeEeeccC--CCcEEEEeccccccCCccccceEEeecCCcceehhhccccchhhheeecCCCeEEEEEcC
Confidence 357777733 35666554 9999999998753 3567899999999999 999999999 9999999
Q ss_pred Cc-CceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCC-CCeEEEEE-ecCceEEEEECCc
Q psy505 82 SI-DTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKR-GSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 82 ~~-~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~-~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
++ .+......+|+. .+.+++|+| +...+|+++.|++|.|||++. .+++..+. |.+.|+.|.|+|.
T Consensus 259 ~~~~~~~~~~~ah~~--~vn~~~fnp~~~~ilAT~S~D~tV~LwDlRnL~~~lh~~e~H~dev~~V~WSPh 327 (422)
T KOG0264|consen 259 SNTSKPSHSVKAHSA--EVNCVAFNPFNEFILATGSADKTVALWDLRNLNKPLHTFEGHEDEVFQVEWSPH 327 (422)
T ss_pred CCCCCCcccccccCC--ceeEEEeCCCCCceEEeccCCCcEEEeechhcccCceeccCCCcceEEEEeCCC
Confidence 52 223344455654 477888997 778889999999999999987 34556665 6789999999997
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=1.9e-15 Score=128.63 Aligned_cols=132 Identities=12% Similarity=0.113 Sum_probs=101.7
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCc-eEEEEeCCcCc
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~ 85 (161)
.|+..|-+++.=|++ .+++++. |.+||+|.- ++++++|.||++.|++++ -|+|++.|| ||+|++ +|+.
T Consensus 138 gH~asVWAv~~l~e~-~~vTgsa--DKtIklWk~--~~~l~tf~gHtD~VRgL~vl~~~~flScsNDg~Ir~w~~-~ge~ 211 (745)
T KOG0301|consen 138 GHTASVWAVASLPEN-TYVTGSA--DKTIKLWKG--GTLLKTFSGHTDCVRGLAVLDDSHFLSCSNDGSIRLWDL-DGEV 211 (745)
T ss_pred CcchheeeeeecCCC-cEEeccC--cceeeeccC--CchhhhhccchhheeeeEEecCCCeEeecCCceEEEEec-cCce
Confidence 344556677776776 5555444 999999986 788999999999999999 789999999 999999 6676
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecC-ceEEEEECCc-EEEEEe
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSN-TILAVKLNRK-KEEEED 154 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~-~V~~v~~~~~-~~vv~~ 154 (161)
+ ..+.||++ .+.++...++...++|+++|++++||+.. .|.+.+.++. .||++.+=++ .++|..
T Consensus 212 l-~~~~ghtn--~vYsis~~~~~~~Ivs~gEDrtlriW~~~--e~~q~I~lPttsiWsa~~L~NgDIvvg~ 277 (745)
T KOG0301|consen 212 L-LEMHGHTN--FVYSISMALSDGLIVSTGEDRTLRIWKKD--ECVQVITLPTTSIWSAKVLLNGDIVVGG 277 (745)
T ss_pred e-eeeeccce--EEEEEEecCCCCeEEEecCCceEEEeecC--ceEEEEecCccceEEEEEeeCCCEEEec
Confidence 5 34456654 56676666666667888899999999986 8889999876 8999888432 444433
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.67 E-value=3.7e-16 Score=134.20 Aligned_cols=135 Identities=12% Similarity=0.132 Sum_probs=110.0
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCc
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~ 83 (161)
.|...+..|.|++-..+++.+|+. ||+||+||++..+...++.+....|++|. .|+++.+.| +++||++.-
T Consensus 131 EH~Rs~~~ldfh~tep~iliSGSQ-Dg~vK~~DlR~~~S~~t~~~nSESiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp 209 (839)
T KOG0269|consen 131 EHERSANKLDFHSTEPNILISGSQ-DGTVKCWDLRSKKSKSTFRSNSESIRDVKFSPGYGNKFASIHDSGYLQLWDLRQP 209 (839)
T ss_pred hhccceeeeeeccCCccEEEecCC-CceEEEEeeecccccccccccchhhhceeeccCCCceEEEecCCceEEEeeccCc
Confidence 455678888888866666666775 99999999999999999999999999999 999999999 999999865
Q ss_pred CceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeE--EEEEecCceEEEEECCcE
Q psy505 84 DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEI--CNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i--~~l~~~~~V~~v~~~~~~ 149 (161)
+....-+..|.++ +.++.|+||.-++|+|+-|++|+|||...++.- ..+.--.+|..|+|.|++
T Consensus 210 ~r~~~k~~AH~Gp--V~c~nwhPnr~~lATGGRDK~vkiWd~t~~~~~~~~tInTiapv~rVkWRP~~ 275 (839)
T KOG0269|consen 210 DRCEKKLTAHNGP--VLCLNWHPNREWLATGGRDKMVKIWDMTDSRAKPKHTINTIAPVGRVKWRPAR 275 (839)
T ss_pred hhHHHHhhcccCc--eEEEeecCCCceeeecCCCccEEEEeccCCCccceeEEeecceeeeeeeccCc
Confidence 5443445567764 677889999999999999999999998765433 333345789999999973
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.66 E-value=1.5e-15 Score=130.37 Aligned_cols=136 Identities=21% Similarity=0.258 Sum_probs=113.5
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
-+.++..+||...||. |.. ||.|+||++.++...-+|.||...|+++. +|||||.|+ |-+||+-...-+ -
T Consensus 67 evt~l~~~~d~l~lAV-GYa-DGsVqif~~~s~~~~~tfngHK~AVt~l~fd~~G~rlaSGskDt~IIvwDlV~E~Gl-~ 143 (888)
T KOG0306|consen 67 EVTCLRSSDDILLLAV-GYA-DGSVQIFSLESEEILITFNGHKAAVTTLKFDKIGTRLASGSKDTDIIVWDLVGEEGL-F 143 (888)
T ss_pred eEEEeeccCCcceEEE-Eec-CceEEeeccCCCceeeeecccccceEEEEEcccCceEeecCCCccEEEEEeccceee-E
Confidence 4667777889888888 443 99999999999999999999999999888 999999999 999998442222 2
Q ss_pred EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEecc
Q psy505 89 IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~ 156 (161)
-++||.. .|..+.|......++|.+.|++||+||++++.|..+.. +++.|++..+.++.++....+
T Consensus 144 rL~GHkd--~iT~~~F~~~~~~lvS~sKDs~iK~WdL~tqhCf~Thvd~r~Eiw~l~~~~~~lvt~~~d 210 (888)
T KOG0306|consen 144 RLRGHKD--SITQALFLNGDSFLVSVSKDSMIKFWDLETQHCFETHVDHRGEIWALVLDEKLLVTAGTD 210 (888)
T ss_pred EeecchH--HHhHHhccCCCeEEEEeccCceEEEEecccceeeeEEecccceEEEEEEecceEEEEecC
Confidence 3467764 47888998866677888899999999999999998864 689999999999888877666
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1.2e-14 Score=110.87 Aligned_cols=147 Identities=16% Similarity=0.158 Sum_probs=114.9
Q ss_pred CCCCceeEEeec--C--CCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCc-eEEEEe
Q psy505 11 PPNPNGICCLCV--N--SDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 11 ~~~~~~v~~~~~--~--~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~ 80 (161)
..+...|..++| . ..|.+|+++|.. |..|.+-|...|+..+.+.||++-|-++- ++++||+|. ||.||+
T Consensus 133 nmhdgtirdl~fld~~~s~~~il~s~gag-dc~iy~tdc~~g~~~~a~sghtghilalyswn~~m~~sgsqdktirfwdl 211 (350)
T KOG0641|consen 133 NMHDGTIRDLAFLDDPESGGAILASAGAG-DCKIYITDCGRGQGFHALSGHTGHILALYSWNGAMFASGSQDKTIRFWDL 211 (350)
T ss_pred eecCCceeeeEEecCCCcCceEEEecCCC-cceEEEeecCCCCcceeecCCcccEEEEEEecCcEEEccCCCceEEEEee
Confidence 344445777777 2 256788988875 88888889999999999999999998887 999999999 999999
Q ss_pred CCcCceeeEEe--ecC---cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE---EE
Q psy505 81 NSIDTLEQIYE--NSQ---EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK---EE 151 (161)
Q Consensus 81 ~~~~~~~~~~~--~~~---~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~---~v 151 (161)
+--.++ ..+. .|. ....|.+++..|.+..+++|-.|....+||++-++.++.+. |...|.+|+|+|.. |.
T Consensus 212 rv~~~v-~~l~~~~~~~glessavaav~vdpsgrll~sg~~dssc~lydirg~r~iq~f~phsadir~vrfsp~a~yllt 290 (350)
T KOG0641|consen 212 RVNSCV-NTLDNDFHDGGLESSAVAAVAVDPSGRLLASGHADSSCMLYDIRGGRMIQRFHPHSADIRCVRFSPGAHYLLT 290 (350)
T ss_pred ecccee-eeccCcccCCCcccceeEEEEECCCcceeeeccCCCceEEEEeeCCceeeeeCCCccceeEEEeCCCceEEEE
Confidence 754333 2221 122 23457788999999999999999999999999999999986 67899999999983 33
Q ss_pred EEecccee
Q psy505 152 EEDEEEEK 159 (161)
Q Consensus 152 v~~~~~~~ 159 (161)
.-.+.+|+
T Consensus 291 ~syd~~ik 298 (350)
T KOG0641|consen 291 CSYDMKIK 298 (350)
T ss_pred ecccceEE
Confidence 33444554
|
|
| >KOG0289|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=6.5e-15 Score=120.09 Aligned_cols=143 Identities=10% Similarity=0.177 Sum_probs=122.6
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
.|...|+.+.++|+...+++++. |-.||||.....++...+..|+.+|+.++ ||.++|+|| +-..|.++|.
T Consensus 259 Gh~kki~~v~~~~~~~~v~~aSa--d~~i~vws~~~~s~~~~~~~h~~~V~~ls~h~tgeYllsAs~d~~w~Fsd~~~g~ 336 (506)
T KOG0289|consen 259 GHTKKITSVKFHKDLDTVITASA--DEIIRVWSVPLSSEPTSSRPHEEPVTGLSLHPTGEYLLSASNDGTWAFSDISSGS 336 (506)
T ss_pred CcceEEEEEEeccchhheeecCC--cceEEeeccccccCccccccccccceeeeeccCCcEEEEecCCceEEEEEccCCc
Confidence 46677999999999878777555 99999999999999999999999999999 999999999 9999999998
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEeccc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEEE 157 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~~ 157 (161)
.+... ....+.+.+.+..|+||++.++.|..|+.|+|||++.+..+..|. |.++|.+++|+-+ .+++..++-
T Consensus 337 ~lt~v-s~~~s~v~~ts~~fHpDgLifgtgt~d~~vkiwdlks~~~~a~Fpght~~vk~i~FsENGY~Lat~add~ 411 (506)
T KOG0289|consen 337 QLTVV-SDETSDVEYTSAAFHPDGLIFGTGTPDGVVKIWDLKSQTNVAKFPGHTGPVKAISFSENGYWLATAADDG 411 (506)
T ss_pred EEEEE-eeccccceeEEeeEcCCceEEeccCCCceEEEEEcCCccccccCCCCCCceeEEEeccCceEEEEEecCC
Confidence 76433 222345778899999999999999999999999999999888886 6789999999887 666666664
|
|
| >KOG0305|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=1e-15 Score=128.31 Aligned_cols=130 Identities=15% Similarity=0.151 Sum_probs=116.0
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeec-cCccceeee----eEEEecCCc-eEEEEeCCcCcee
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA-HDSPLAALA----SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~-H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~~ 87 (161)
...|+++.++++|.+||.+-. +|.|.|||..+.+.+.++.+ |...|-+++ .+.+|+.|| |..+|++..+...
T Consensus 217 ~~~vtSv~ws~~G~~LavG~~--~g~v~iwD~~~~k~~~~~~~~h~~rvg~laW~~~~lssGsr~~~I~~~dvR~~~~~~ 294 (484)
T KOG0305|consen 217 EELVTSVKWSPDGSHLAVGTS--DGTVQIWDVKEQKKTRTLRGSHASRVGSLAWNSSVLSSGSRDGKILNHDVRISQHVV 294 (484)
T ss_pred CCceEEEEECCCCCEEEEeec--CCeEEEEehhhccccccccCCcCceeEEEeccCceEEEecCCCcEEEEEEecchhhh
Confidence 456999999999999999776 89999999999999999999 999999999 899999999 9999999887665
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECC
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNR 147 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~ 147 (161)
..+++|.. .|+.+.|++++..++||+.||.+.|||.....++..+. |...|.+++|+|
T Consensus 295 ~~~~~H~q--eVCgLkws~d~~~lASGgnDN~~~Iwd~~~~~p~~~~~~H~aAVKA~awcP 353 (484)
T KOG0305|consen 295 STLQGHRQ--EVCGLKWSPDGNQLASGGNDNVVFIWDGLSPEPKFTFTEHTAAVKALAWCP 353 (484)
T ss_pred hhhhcccc--eeeeeEECCCCCeeccCCCccceEeccCCCccccEEEeccceeeeEeeeCC
Confidence 55677764 58999999999999999999999999997777776664 889999999998
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.8e-15 Score=114.85 Aligned_cols=148 Identities=13% Similarity=0.117 Sum_probs=114.2
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG 74 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg 74 (161)
||+|--. +|.. .+.-+-+|.+|.+|.+++- |.+..||-..+|+.+-++.||++.|+|+. .+.+||.|.
T Consensus 1 mrpi~l~--GHER--plTqiKyN~eGDLlFscaK--D~~~~vw~s~nGerlGty~GHtGavW~~Did~~s~~liTGSAD~ 74 (327)
T KOG0643|consen 1 MRPILLQ--GHER--PLTQIKYNREGDLLFSCAK--DSTPTVWYSLNGERLGTYDGHTGAVWCCDIDWDSKHLITGSADQ 74 (327)
T ss_pred CCccccc--cCcc--ccceEEecCCCcEEEEecC--CCCceEEEecCCceeeeecCCCceEEEEEecCCcceeeeccccc
Confidence 6665544 4444 4777888999999998775 99999999999999999999999999999 999999999
Q ss_pred -eEEEEeCCcCceeeEEeec--------------------------------------------------CcceEEEEEe
Q psy505 75 -YRLFSLNSIDTLEQIYENS--------------------------------------------------QEDVCIVERL 103 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~--------------------------------------------------~~~~~v~~~~ 103 (161)
+||||+++|+.+...-.+- .+...+..+.
T Consensus 75 t~kLWDv~tGk~la~~k~~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi~~~~~~~~s~ep~~kI~t~~skit~a~ 154 (327)
T KOG0643|consen 75 TAKLWDVETGKQLATWKTNSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDIRDDSSDIDSEEPYLKIPTPDSKITSAL 154 (327)
T ss_pred eeEEEEcCCCcEEEEeecCCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEccCChhhhcccCceEEecCCccceeeee
Confidence 9999999997653221110 0011344556
Q ss_pred ecCCeEEEEecCCCCeEEEEecCCCCeEEE-E-EecCceEEEEECCcEEEEEe
Q psy505 104 FSSSLVAVVSLSSPRKLTVCHFKRGSEICN-Y-SFSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 104 fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~-l-~~~~~V~~v~~~~~~~vv~~ 154 (161)
|+|-+..+++|.+|+.|.+||+++|+.+.. - .|.+.|..++|+|++-..++
T Consensus 155 Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~~Ind~q~s~d~T~FiT 207 (327)
T KOG0643|consen 155 WGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSSKINDLQFSRDRTYFIT 207 (327)
T ss_pred ecccCCEEEEecCCCcEEEEEcccCceeeechhhhccccccccccCCcceEEe
Confidence 667666777888999999999999866544 2 37889999999998544443
|
|
| >KOG0267|consensus | Back alignment and domain information |
|---|
Probab=99.65 E-value=2.5e-16 Score=134.53 Aligned_cols=139 Identities=12% Similarity=0.123 Sum_probs=119.9
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
..++.+.|+|-+.+.|+++. |+.+++||.+-..|.+++.+|...|.++. ++++|++|. ++|||...|+..
T Consensus 113 ~~~~sv~f~P~~~~~a~gSt--dtd~~iwD~Rk~Gc~~~~~s~~~vv~~l~lsP~Gr~v~~g~ed~tvki~d~~agk~~- 189 (825)
T KOG0267|consen 113 LNITSVDFHPYGEFFASGST--DTDLKIWDIRKKGCSHTYKSHTRVVDVLRLSPDGRWVASGGEDNTVKIWDLTAGKLS- 189 (825)
T ss_pred cCcceeeeccceEEeccccc--cccceehhhhccCceeeecCCcceeEEEeecCCCceeeccCCcceeeeecccccccc-
Confidence 34678889999999976443 99999999998899999999999999988 999999999 999999998865
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEeccce
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEEDEEEE 158 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~~~ 158 (161)
..|.+|... +..+.|+|.-+++++|+.|+++++||+++=+.|.... +...|.+.+|||+.-.+...++|
T Consensus 190 ~ef~~~e~~--v~sle~hp~e~Lla~Gs~d~tv~f~dletfe~I~s~~~~~~~v~~~~fn~~~~~~~~G~q~ 259 (825)
T KOG0267|consen 190 KEFKSHEGK--VQSLEFHPLEVLLAPGSSDRTVRFWDLETFEVISSGKPETDGVRSLAFNPDGKIVLSGEQI 259 (825)
T ss_pred ccccccccc--ccccccCchhhhhccCCCCceeeeeccceeEEeeccCCccCCceeeeecCCceeeecCchh
Confidence 556777654 6667799999999999999999999999887777665 57899999999998888887775
|
|
| >KOG0313|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=5.9e-15 Score=118.58 Aligned_cols=131 Identities=11% Similarity=0.133 Sum_probs=105.3
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcC-------------------------CCCceeeeeccCccceeee-
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDAD-------------------------NLHAKTMIPAHDSPLAALA- 65 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~-------------------------~~~~~~~l~~H~~~V~~l~- 65 (161)
.|..+|-+++.+++|..+++++. |.+++||+.. ++.++.++.||.++|.+|.
T Consensus 191 GHk~~V~sVsv~~sgtr~~SgS~--D~~lkiWs~~~~~~~~~E~~s~~rrk~~~~~~~~~~r~P~vtl~GHt~~Vs~V~w 268 (423)
T KOG0313|consen 191 GHKRSVDSVSVDSSGTRFCSGSW--DTMLKIWSVETDEEDELESSSNRRRKKQKREKEGGTRTPLVTLEGHTEPVSSVVW 268 (423)
T ss_pred ccccceeEEEecCCCCeEEeecc--cceeeecccCCCccccccccchhhhhhhhhhhcccccCceEEecccccceeeEEE
Confidence 46667899999999998887554 9999999922 1246778999999999998
Q ss_pred ----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC--eE-EEE-Ee
Q psy505 66 ----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS--EI-CNY-SF 136 (161)
Q Consensus 66 ----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~--~i-~~l-~~ 136 (161)
-+.|+|.|. ||.||+++|.....+. + +....++.++|....+++|+.|+-+++||.+++. .+ .+| .|
T Consensus 269 ~d~~v~yS~SwDHTIk~WDletg~~~~~~~-~---~ksl~~i~~~~~~~Ll~~gssdr~irl~DPR~~~gs~v~~s~~gH 344 (423)
T KOG0313|consen 269 SDATVIYSVSWDHTIKVWDLETGGLKSTLT-T---NKSLNCISYSPLSKLLASGSSDRHIRLWDPRTGDGSVVSQSLIGH 344 (423)
T ss_pred cCCCceEeecccceEEEEEeecccceeeee-c---CcceeEeecccccceeeecCCCCceeecCCCCCCCceeEEeeecc
Confidence 778999999 9999999987653332 2 2346788899988888999999999999999864 33 334 37
Q ss_pred cCceEEEEECCc
Q psy505 137 SNTILAVKLNRK 148 (161)
Q Consensus 137 ~~~V~~v~~~~~ 148 (161)
.+.|.+|.++|.
T Consensus 345 ~nwVssvkwsp~ 356 (423)
T KOG0313|consen 345 KNWVSSVKWSPT 356 (423)
T ss_pred hhhhhheecCCC
Confidence 789999999996
|
|
| >KOG0302|consensus | Back alignment and domain information |
|---|
Probab=99.64 E-value=1.6e-15 Score=121.89 Aligned_cols=132 Identities=13% Similarity=0.181 Sum_probs=96.0
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC---CceeeeeccCccceeee------eEEEecCCc-eEEEEeC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL---HAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~---~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~ 81 (161)
.|...|-.|..+|....+.++++. ||+|||||.+++ .++. .++|.+.|+-++ +||+|++|| ++|||++
T Consensus 255 gH~~SVEDLqWSptE~~vfaScS~-DgsIrIWDiRs~~~~~~~~-~kAh~sDVNVISWnr~~~lLasG~DdGt~~iwDLR 332 (440)
T KOG0302|consen 255 GHTKSVEDLQWSPTEDGVFASCSC-DGSIRIWDIRSGPKKAAVS-TKAHNSDVNVISWNRREPLLASGGDDGTLSIWDLR 332 (440)
T ss_pred ccccchhhhccCCccCceEEeeec-CceEEEEEecCCCccceeE-eeccCCceeeEEccCCcceeeecCCCceEEEEEhh
Confidence 367778888888866555555665 999999999998 3443 489999999999 899999999 9999987
Q ss_pred C---cCceeeEEeecCcceEEEEEeecCC-eEEEEecCCCCeEEEEecCCCCe--------EEE-------E--Ee--cC
Q psy505 82 S---IDTLEQIYENSQEDVCIVERLFSSS-LVAVVSLSSPRKLTVCHFKRGSE--------ICN-------Y--SF--SN 138 (161)
Q Consensus 82 ~---~~~~~~~~~~~~~~~~v~~~~fs~~-~~~~~s~~~d~~i~iWD~~~~~~--------i~~-------l--~~--~~ 138 (161)
+ +.++ ..|..|..+ |.++.|+|. ...++.+++|++|.|||+..-.- ... | .| ..
T Consensus 333 ~~~~~~pV-A~fk~Hk~p--ItsieW~p~e~s~iaasg~D~QitiWDlsvE~D~ee~~~~a~~~L~dlPpQLLFVHqGQk 409 (440)
T KOG0302|consen 333 QFKSGQPV-ATFKYHKAP--ITSIEWHPHEDSVIAASGEDNQITIWDLSVEADEEEIDQEAAEGLQDLPPQLLFVHQGQK 409 (440)
T ss_pred hccCCCcc-eeEEeccCC--eeEEEeccccCceEEeccCCCcEEEEEeeccCChhhhccccccchhcCCceeEEEecchh
Confidence 5 3455 356778654 667789872 23344445889999999864321 111 2 23 35
Q ss_pred ceEEEEECCc
Q psy505 139 TILAVKLNRK 148 (161)
Q Consensus 139 ~V~~v~~~~~ 148 (161)
.|..|.|+|+
T Consensus 410 e~KevhWH~Q 419 (440)
T KOG0302|consen 410 EVKEVHWHRQ 419 (440)
T ss_pred HhhhheeccC
Confidence 6888888876
|
|
| >KOG0264|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=3.8e-15 Score=121.35 Aligned_cols=144 Identities=15% Similarity=0.227 Sum_probs=107.9
Q ss_pred CCCceeEEeecCC-CceEEEEcCCCCcceEEEEEcC--CCCceeeeeccCccceeee-------eEEEecCCc-eEEEEe
Q psy505 12 PNPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDAD--NLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 12 ~~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~--~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~ 80 (161)
.+...|.-++++| +...+++.|. |+.+.|||++ +.++.+...||.++|+|++ +||+||.|+ ++|||+
T Consensus 225 ~h~~~VeDV~~h~~h~~lF~sv~d--d~~L~iwD~R~~~~~~~~~~~ah~~~vn~~~fnp~~~~ilAT~S~D~tV~LwDl 302 (422)
T KOG0264|consen 225 GHEDVVEDVAWHPLHEDLFGSVGD--DGKLMIWDTRSNTSKPSHSVKAHSAEVNCVAFNPFNEFILATGSADKTVALWDL 302 (422)
T ss_pred cCCcceehhhccccchhhheeecC--CCeEEEEEcCCCCCCCcccccccCCceeEEEeCCCCCceEEeccCCCcEEEeec
Confidence 3445567777777 3456666665 9999999999 5667788999999999999 999999999 999999
Q ss_pred CCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEE----------E--EE---ecCceEEEE
Q psy505 81 NSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEIC----------N--YS---FSNTILAVK 144 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~----------~--l~---~~~~V~~v~ 144 (161)
|+=......+.+|.. .|.++-||| +...++|++.|+.+.|||+.+-...+ + |. |.+.|....
T Consensus 303 RnL~~~lh~~e~H~d--ev~~V~WSPh~etvLASSg~D~rl~vWDls~ig~eq~~eda~dgppEllF~HgGH~~kV~Dfs 380 (422)
T KOG0264|consen 303 RNLNKPLHTFEGHED--EVFQVEWSPHNETVLASSGTDRRLNVWDLSRIGEEQSPEDAEDGPPELLFIHGGHTAKVSDFS 380 (422)
T ss_pred hhcccCceeccCCCc--ceEEEEeCCCCCceeEecccCCcEEEEeccccccccChhhhccCCcceeEEecCccccccccc
Confidence 864332245677765 477888998 44577888899999999997632222 1 33 346899999
Q ss_pred ECCc---EEEEEecccee
Q psy505 145 LNRK---KEEEEDEEEEK 159 (161)
Q Consensus 145 ~~~~---~~vv~~~~~~~ 159 (161)
|||. -++-|.+|.|-
T Consensus 381 Wnp~ePW~I~SvaeDN~L 398 (422)
T KOG0264|consen 381 WNPNEPWTIASVAEDNIL 398 (422)
T ss_pred CCCCCCeEEEEecCCceE
Confidence 9997 56666666543
|
|
| >KOG0645|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=2.9e-14 Score=110.54 Aligned_cols=143 Identities=14% Similarity=0.184 Sum_probs=115.1
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC---CceeeeeccCccceeee------eEEEecC
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL---HAKTMIPAHDSPLAALA------SLSVGTK 72 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~---~~~~~l~~H~~~V~~l~------~lasgs~ 72 (161)
+++.+| ++|.|. |.+++++++|.+||+++. |..|=||....+ .|...|+.|++.|..+. +|+|+|-
T Consensus 96 ecv~~l-EGHEnE--VK~Vaws~sG~~LATCSR--DKSVWiWe~deddEfec~aVL~~HtqDVK~V~WHPt~dlL~S~SY 170 (312)
T KOG0645|consen 96 ECVATL-EGHENE--VKCVAWSASGNYLATCSR--DKSVWIWEIDEDDEFECIAVLQEHTQDVKHVIWHPTEDLLFSCSY 170 (312)
T ss_pred eEEeee-eccccc--eeEEEEcCCCCEEEEeeC--CCeEEEEEecCCCcEEEEeeeccccccccEEEEcCCcceeEEecc
Confidence 578889 888886 888899999999999776 999999998854 58899999999999998 9999999
Q ss_pred Cc-eEEEEeCCcC--ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--ecCceEEEEECC
Q psy505 73 SG-YRLFSLNSID--TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--FSNTILAVKLNR 147 (161)
Q Consensus 73 dg-iriwd~~~~~--~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--~~~~V~~v~~~~ 147 (161)
|. ||+|+-..++ .+...+.+|.+ ++-+++|++++.-++|+++|++++||-.. +.+. ++.+++.|.+..
T Consensus 171 DnTIk~~~~~~dddW~c~~tl~g~~~--TVW~~~F~~~G~rl~s~sdD~tv~Iw~~~-----~~~~~~~sr~~Y~v~W~~ 243 (312)
T KOG0645|consen 171 DNTIKVYRDEDDDDWECVQTLDGHEN--TVWSLAFDNIGSRLVSCSDDGTVSIWRLY-----TDLSGMHSRALYDVPWDN 243 (312)
T ss_pred CCeEEEEeecCCCCeeEEEEecCccc--eEEEEEecCCCceEEEecCCcceEeeeec-----cCcchhcccceEeeeecc
Confidence 99 9999976332 12356677865 57788999999999999999999999865 3333 567888888885
Q ss_pred cEEEEEecc
Q psy505 148 KKEEEEDEE 156 (161)
Q Consensus 148 ~~~vv~~~~ 156 (161)
+-++.+..|
T Consensus 244 ~~IaS~ggD 252 (312)
T KOG0645|consen 244 GVIASGGGD 252 (312)
T ss_pred cceEeccCC
Confidence 555555444
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.63 E-value=1.2e-14 Score=114.08 Aligned_cols=137 Identities=15% Similarity=0.203 Sum_probs=110.6
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCc-eEEEEeCCcCcee
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~~~ 87 (161)
.++|.++.|+|.+..|+.++. ||+++++|+........++ |..|+.+++ .+++|+.|| ||.+|+.++...
T Consensus 13 ~d~IS~v~f~~~~~~LLvssW--DgslrlYdv~~~~l~~~~~-~~~plL~c~F~d~~~~~~G~~dg~vr~~Dln~~~~~- 88 (323)
T KOG1036|consen 13 EDGISSVKFSPSSSDLLVSSW--DGSLRLYDVPANSLKLKFK-HGAPLLDCAFADESTIVTGGLDGQVRRYDLNTGNED- 88 (323)
T ss_pred hhceeeEEEcCcCCcEEEEec--cCcEEEEeccchhhhhhee-cCCceeeeeccCCceEEEeccCceEEEEEecCCcce-
Confidence 468999999998877777677 9999999999876655554 899999998 788999999 999999998643
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEeccc
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEEDEEE 157 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~~~~ 157 (161)
....|..+ +.++.|++---.+++|+.|++|++||.+...++..+.-...|.+...+.++|+|.+.++
T Consensus 89 -~igth~~~--i~ci~~~~~~~~vIsgsWD~~ik~wD~R~~~~~~~~d~~kkVy~~~v~g~~LvVg~~~r 155 (323)
T KOG1036|consen 89 -QIGTHDEG--IRCIEYSYEVGCVISGSWDKTIKFWDPRNKVVVGTFDQGKKVYCMDVSGNRLVVGTSDR 155 (323)
T ss_pred -eeccCCCc--eEEEEeeccCCeEEEcccCccEEEEeccccccccccccCceEEEEeccCCEEEEeecCc
Confidence 44556554 56666776555678888999999999998666666666779999999999999966653
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1e-14 Score=128.67 Aligned_cols=155 Identities=15% Similarity=0.190 Sum_probs=120.8
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC------------CceeeeeccCccceeee---
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL------------HAKTMIPAHDSPLAALA--- 65 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~------------~~~~~l~~H~~~V~~l~--- 65 (161)
|+++.-.+-. .+...++++..+|||..+|++|...||.++||+...- +.+.++.-|.+.|+|+.
T Consensus 1 M~l~kp~wv~-H~~~~IfSIdv~pdg~~~aTgGq~~d~~~~iW~~~~vl~~~~~~~~~l~k~l~~m~~h~~sv~CVR~S~ 79 (942)
T KOG0973|consen 1 MKLLKPTWVN-HNEKSIFSIDVHPDGVKFATGGQVLDGGIVIWSQDPVLDEKEEKNENLPKHLCTMDDHDGSVNCVRFSP 79 (942)
T ss_pred Cceecccccc-cCCeeEEEEEecCCceeEecCCccccccceeeccccccchhhhhhcccchhheeeccccCceeEEEECC
Confidence 5555544333 3445689999999999999988333999999986642 23456788999999997
Q ss_pred ---eEEEecCCc-eEEEEeCC---cC--------------ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEe
Q psy505 66 ---SLSVGTKSG-YRLFSLNS---ID--------------TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124 (161)
Q Consensus 66 ---~lasgs~dg-iriwd~~~---~~--------------~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD 124 (161)
+||+||+|+ |.||+-.. +. .....+++|.++ |..+.|+|++..+||++-|++|.|||
T Consensus 80 dG~~lAsGSDD~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~D--V~Dv~Wsp~~~~lvS~s~DnsViiwn 157 (942)
T KOG0973|consen 80 DGSYLASGSDDRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSD--VLDVNWSPDDSLLVSVSLDNSVIIWN 157 (942)
T ss_pred CCCeEeeccCcceEEEeeecccCCcccccccccccccceeeEEEEEecCCCc--cceeccCCCccEEEEecccceEEEEc
Confidence 999999999 99999862 00 023466788754 78899999999999999999999999
Q ss_pred cCCCCeEEEEE-ecCceEEEEECCc--EEEEEeccce
Q psy505 125 FKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEEEE 158 (161)
Q Consensus 125 ~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~~~ 158 (161)
.++-+++..+. |.+.|.+|.|.|- .++.-.+|+.
T Consensus 158 ~~tF~~~~vl~~H~s~VKGvs~DP~Gky~ASqsdDrt 194 (942)
T KOG0973|consen 158 AKTFELLKVLRGHQSLVKGVSWDPIGKYFASQSDDRT 194 (942)
T ss_pred cccceeeeeeecccccccceEECCccCeeeeecCCce
Confidence 99999988886 7899999999996 4444444443
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=1.4e-14 Score=118.55 Aligned_cols=145 Identities=21% Similarity=0.230 Sum_probs=105.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee---------------------------
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------------------------- 65 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------------------------- 65 (161)
+..-+.+++.+|||.|+|++|. |..|.|||.++++.++.|.+|.++|.+++
T Consensus 201 h~keil~~avS~Dgkylatgg~--d~~v~Iw~~~t~ehv~~~~ghr~~V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~ 278 (479)
T KOG0299|consen 201 HVKEILTLAVSSDGKYLATGGR--DRHVQIWDCDTLEHVKVFKGHRGAVSSLAFRKGTSELYSASADRSVKVWSIDQLSY 278 (479)
T ss_pred ccceeEEEEEcCCCcEEEecCC--CceEEEecCcccchhhcccccccceeeeeeecCccceeeeecCCceEEEehhHhHH
Confidence 4456889999999999999776 99999999999999999999999998777
Q ss_pred -------------------------------------------------------------eEEEecCCc-eEEEEeCCc
Q psy505 66 -------------------------------------------------------------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 66 -------------------------------------------------------------~lasgs~dg-iriwd~~~~ 83 (161)
-|++||++| |-+|++.+-
T Consensus 279 vetlyGHqd~v~~IdaL~reR~vtVGgrDrT~rlwKi~eesqlifrg~~~sidcv~~In~~HfvsGSdnG~IaLWs~~KK 358 (479)
T KOG0299|consen 279 VETLYGHQDGVLGIDALSRERCVTVGGRDRTVRLWKIPEESQLIFRGGEGSIDCVAFINDEHFVSGSDNGSIALWSLLKK 358 (479)
T ss_pred HHHHhCCccceeeechhcccceEEeccccceeEEEeccccceeeeeCCCCCeeeEEEecccceeeccCCceEEEeeeccc
Confidence 245555555 555555444
Q ss_pred CceeeEEeecC---------cceEEEEEeecCCeEEEEecCCCCeEEEEecCCC----CeEEEEEecCceEEEEECCc-E
Q psy505 84 DTLEQIYENSQ---------EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG----SEICNYSFSNTILAVKLNRK-K 149 (161)
Q Consensus 84 ~~~~~~~~~~~---------~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~----~~i~~l~~~~~V~~v~~~~~-~ 149 (161)
+++......|. .+.++.+++-.|..-.++||+.++.||+|-+..| +++.++++.+.|++++|+++ +
T Consensus 359 kplf~~~~AHgv~~~~~~~~~~~Witsla~i~~sdL~asGS~~G~vrLW~i~~g~r~i~~l~~ls~~GfVNsl~f~~sgk 438 (479)
T KOG0299|consen 359 KPLFTSRLAHGVIPELDPVNGNFWITSLAVIPGSDLLASGSWSGCVRLWKIEDGLRAINLLYSLSLVGFVNSLAFSNSGK 438 (479)
T ss_pred CceeEeeccccccCCccccccccceeeeEecccCceEEecCCCCceEEEEecCCccccceeeecccccEEEEEEEccCCC
Confidence 44322221221 1126677777766666788888999999999888 56777888999999999886 3
Q ss_pred EEEEecccee
Q psy505 150 EEEEDEEEEK 159 (161)
Q Consensus 150 ~vv~~~~~~~ 159 (161)
-++|.-.+.|
T Consensus 439 ~ivagiGkEh 448 (479)
T KOG0299|consen 439 RIVAGIGKEH 448 (479)
T ss_pred EEEEeccccc
Confidence 3554444443
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.62 E-value=4.2e-14 Score=111.18 Aligned_cols=142 Identities=13% Similarity=0.211 Sum_probs=106.7
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCc--C
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSI--D 84 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~--~ 84 (161)
.|...|.+++.+|-+....+++. |++||+||++..+|...+..-..++.+.. ++|+|.... |+|||++.- .
T Consensus 98 GH~~~V~sL~~sP~~d~FlS~S~--D~tvrLWDlR~~~cqg~l~~~~~pi~AfDp~GLifA~~~~~~~IkLyD~Rs~dkg 175 (311)
T KOG1446|consen 98 GHKKRVNSLSVSPKDDTFLSSSL--DKTVRLWDLRVKKCQGLLNLSGRPIAAFDPEGLIFALANGSELIKLYDLRSFDKG 175 (311)
T ss_pred CCCceEEEEEecCCCCeEEeccc--CCeEEeeEecCCCCceEEecCCCcceeECCCCcEEEEecCCCeEEEEEecccCCC
Confidence 45556889999997777777665 99999999999999888877667776666 788888776 999998742 1
Q ss_pred cee--------------------------------------------eEEeecCc--ceEEEEEeecCCeEEEEecCCCC
Q psy505 85 TLE--------------------------------------------QIYENSQE--DVCIVERLFSSSLVAVVSLSSPR 118 (161)
Q Consensus 85 ~~~--------------------------------------------~~~~~~~~--~~~v~~~~fs~~~~~~~s~~~d~ 118 (161)
|.. ..++++.. ... .+..|+|++..+.+|++|+
T Consensus 176 PF~tf~i~~~~~~ew~~l~FS~dGK~iLlsT~~s~~~~lDAf~G~~~~tfs~~~~~~~~~-~~a~ftPds~Fvl~gs~dg 254 (311)
T KOG1446|consen 176 PFTTFSITDNDEAEWTDLEFSPDGKSILLSTNASFIYLLDAFDGTVKSTFSGYPNAGNLP-LSATFTPDSKFVLSGSDDG 254 (311)
T ss_pred CceeEccCCCCccceeeeEEcCCCCEEEEEeCCCcEEEEEccCCcEeeeEeeccCCCCcc-eeEEECCCCcEEEEecCCC
Confidence 110 11111110 111 3567889999999999999
Q ss_pred eEEEEecCCCCeEEEEEe--cCceEEEEECCcEEEEEecc
Q psy505 119 KLTVCHFKRGSEICNYSF--SNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 119 ~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~~~~vv~~~~ 156 (161)
+|.+|++++|..+..+.. ..++.+++|||.....|..+
T Consensus 255 ~i~vw~~~tg~~v~~~~~~~~~~~~~~~fnP~~~mf~sa~ 294 (311)
T KOG1446|consen 255 TIHVWNLETGKKVAVLRGPNGGPVSCVRFNPRYAMFVSAS 294 (311)
T ss_pred cEEEEEcCCCcEeeEecCCCCCCccccccCCceeeeeecC
Confidence 999999999999988864 57899999999977666554
|
|
| >KOG0646|consensus | Back alignment and domain information |
|---|
Probab=99.60 E-value=4.2e-15 Score=121.73 Aligned_cols=134 Identities=14% Similarity=0.170 Sum_probs=110.2
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC---------CCceeeeeccCccceeee--------eEEEecCCc-
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN---------LHAKTMIPAHDSPLAALA--------SLSVGTKSG- 74 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~---------~~~~~~l~~H~~~V~~l~--------~lasgs~dg- 74 (161)
|-..|.++.|+.||.+++++|- ||.|.+|++.. -++++.|..|+-+|+++. .|+|+|.|.
T Consensus 122 HYQ~ITcL~fs~dgs~iiTgsk--Dg~V~vW~l~~lv~a~~~~~~~p~~~f~~HtlsITDl~ig~Gg~~~rl~TaS~D~t 199 (476)
T KOG0646|consen 122 HYQSITCLKFSDDGSHIITGSK--DGAVLVWLLTDLVSADNDHSVKPLHIFSDHTLSITDLQIGSGGTNARLYTASEDRT 199 (476)
T ss_pred hccceeEEEEeCCCcEEEecCC--CccEEEEEEEeecccccCCCccceeeeccCcceeEEEEecCCCccceEEEecCCce
Confidence 4456889999999999999765 99999998653 257888999999999988 999999999
Q ss_pred eEEEEeCCcCcee--------------------------------------------------------eEEeecCcceE
Q psy505 75 YRLFSLNSIDTLE--------------------------------------------------------QIYENSQEDVC 98 (161)
Q Consensus 75 iriwd~~~~~~~~--------------------------------------------------------~~~~~~~~~~~ 98 (161)
+|+||+..|..+. ..+-||.+...
T Consensus 200 ~k~wdlS~g~LLlti~fp~si~av~lDpae~~~yiGt~~G~I~~~~~~~~~~~~~~v~~k~~~~~~t~~~~~~Gh~~~~~ 279 (476)
T KOG0646|consen 200 IKLWDLSLGVLLLTITFPSSIKAVALDPAERVVYIGTEEGKIFQNLLFKLSGQSAGVNQKGRHEENTQINVLVGHENESA 279 (476)
T ss_pred EEEEEeccceeeEEEecCCcceeEEEcccccEEEecCCcceEEeeehhcCCcccccccccccccccceeeeeccccCCcc
Confidence 9999987553211 11123443346
Q ss_pred EEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 99 IVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 99 v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
|.+++.+.|+..++||+.|+.|.|||+...+|+.++. ..++|..++++|=
T Consensus 280 ITcLais~DgtlLlSGd~dg~VcvWdi~S~Q~iRtl~~~kgpVtnL~i~~~ 330 (476)
T KOG0646|consen 280 ITCLAISTDGTLLLSGDEDGKVCVWDIYSKQCIRTLQTSKGPVTNLQINPL 330 (476)
T ss_pred eeEEEEecCccEEEeeCCCCCEEEEecchHHHHHHHhhhccccceeEeecc
Confidence 7888999999999999999999999999999999998 6899999999774
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=4.2e-14 Score=108.65 Aligned_cols=134 Identities=13% Similarity=0.231 Sum_probs=107.1
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
-|.++..+|...-+..+|. |+.+.-||+++|+...+++||++.|.++. .+.||++|| +||||+++++.. .
T Consensus 116 eINam~ldP~enSi~~AgG--D~~~y~~dlE~G~i~r~~rGHtDYvH~vv~R~~~~qilsG~EDGtvRvWd~kt~k~v-~ 192 (325)
T KOG0649|consen 116 EINAMWLDPSENSILFAGG--DGVIYQVDLEDGRIQREYRGHTDYVHSVVGRNANGQILSGAEDGTVRVWDTKTQKHV-S 192 (325)
T ss_pred ccceeEeccCCCcEEEecC--CeEEEEEEecCCEEEEEEcCCcceeeeeeecccCcceeecCCCccEEEEecccccee-E
Confidence 3778888886666666665 99999999999999999999999999998 899999999 999999998755 3
Q ss_pred EEee---------cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEecc
Q psy505 89 IYEN---------SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 89 ~~~~---------~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~~~ 156 (161)
.++. |- +.+|-+++-+.+ +++.|+.+ .+.+|.++..++.+.+.++.+|.-|.|-.|-++.+.+.
T Consensus 193 ~ie~yk~~~~lRp~~-g~wigala~~ed--WlvCGgGp-~lslwhLrsse~t~vfpipa~v~~v~F~~d~vl~~G~g 265 (325)
T KOG0649|consen 193 MIEPYKNPNLLRPDW-GKWIGALAVNED--WLVCGGGP-KLSLWHLRSSESTCVFPIPARVHLVDFVDDCVLIGGEG 265 (325)
T ss_pred EeccccChhhcCccc-CceeEEEeccCc--eEEecCCC-ceeEEeccCCCceEEEecccceeEeeeecceEEEeccc
Confidence 3322 22 235555555544 55555444 59999999999999999999999999999988877744
|
|
| >KOG0282|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=4e-15 Score=122.32 Aligned_cols=135 Identities=13% Similarity=0.122 Sum_probs=108.9
Q ss_pred eEEeecCCCc-eEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCce--
Q psy505 17 ICCLCVNSDN-CYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTL-- 86 (161)
Q Consensus 17 v~~~~~~~d~-~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~-- 86 (161)
..++.|+||+ ..+.++++ |+.|+.||.++++.++++..|-++|.++. .++++|+|+ +|||+.+..-++
T Consensus 302 ~~cvkf~pd~~n~fl~G~s--d~ki~~wDiRs~kvvqeYd~hLg~i~~i~F~~~g~rFissSDdks~riWe~~~~v~ik~ 379 (503)
T KOG0282|consen 302 PTCVKFHPDNQNIFLVGGS--DKKIRQWDIRSGKVVQEYDRHLGAILDITFVDEGRRFISSSDDKSVRIWENRIPVPIKN 379 (503)
T ss_pred ceeeecCCCCCcEEEEecC--CCcEEEEeccchHHHHHHHhhhhheeeeEEccCCceEeeeccCccEEEEEcCCCccchh
Confidence 4577888988 45555554 99999999999999999999999999999 999999999 999997643221
Q ss_pred -------------------------------------------eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEE
Q psy505 87 -------------------------------------------EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVC 123 (161)
Q Consensus 87 -------------------------------------------~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iW 123 (161)
.+.++||.-+=+.+.+.|||++..++||++|+.+-+|
T Consensus 380 i~~~~~hsmP~~~~~P~~~~~~aQs~dN~i~ifs~~~~~r~nkkK~feGh~vaGys~~v~fSpDG~~l~SGdsdG~v~~w 459 (503)
T KOG0282|consen 380 IADPEMHTMPCLTLHPNGKWFAAQSMDNYIAIFSTVPPFRLNKKKRFEGHSVAGYSCQVDFSPDGRTLCSGDSDGKVNFW 459 (503)
T ss_pred hcchhhccCcceecCCCCCeehhhccCceEEEEecccccccCHhhhhcceeccCceeeEEEcCCCCeEEeecCCccEEEe
Confidence 1223344422245678999999999999999999999
Q ss_pred ecCCCCeEEEEE-ecCceEEEEECCc---EEEEE
Q psy505 124 HFKRGSEICNYS-FSNTILAVKLNRK---KEEEE 153 (161)
Q Consensus 124 D~~~~~~i~~l~-~~~~V~~v~~~~~---~~vv~ 153 (161)
|.++-+.+..+. |..++.++.|+|. +++.+
T Consensus 460 dwkt~kl~~~lkah~~~ci~v~wHP~e~Skvat~ 493 (503)
T KOG0282|consen 460 DWKTTKLVSKLKAHDQPCIGVDWHPVEPSKVATC 493 (503)
T ss_pred echhhhhhhccccCCcceEEEEecCCCcceeEec
Confidence 999999999987 5689999999985 55544
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.59 E-value=1.1e-14 Score=114.93 Aligned_cols=120 Identities=10% Similarity=0.167 Sum_probs=102.6
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceee---eeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTM---IPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~---l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
..|.+++|+|.|.+|+.+-. -.++|+||+++.+|-.. -+.|++.|++|. +.++||.|| |||||--+++
T Consensus 217 ~~vrsiSfHPsGefllvgTd--Hp~~rlYdv~T~QcfvsanPd~qht~ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~r 294 (430)
T KOG0640|consen 217 EPVRSISFHPSGEFLLVGTD--HPTLRLYDVNTYQCFVSANPDDQHTGAITQVRYSSTGSLYVTASKDGAIKLWDGVSNR 294 (430)
T ss_pred ceeeeEeecCCCceEEEecC--CCceeEEeccceeEeeecCcccccccceeEEEecCCccEEEEeccCCcEEeeccccHH
Confidence 35889999999999998654 68999999999887433 368999999998 889999999 9999987777
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS 137 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~ 137 (161)
++..+-+.|. +..|++..|+.|+.++.|.+.|.++++|.+.+|+++.++...
T Consensus 295 Cv~t~~~AH~-gsevcSa~Ftkn~kyiLsSG~DS~vkLWEi~t~R~l~~YtGA 346 (430)
T KOG0640|consen 295 CVRTIGNAHG-GSEVCSAVFTKNGKYILSSGKDSTVKLWEISTGRMLKEYTGA 346 (430)
T ss_pred HHHHHHhhcC-CceeeeEEEccCCeEEeecCCcceeeeeeecCCceEEEEecC
Confidence 7755555666 457999999999999999889999999999999999998753
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.58 E-value=7.5e-15 Score=113.06 Aligned_cols=137 Identities=13% Similarity=0.206 Sum_probs=99.5
Q ss_pred CCCCceeEEeecC---CCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----------------------
Q psy505 11 PPNPNGICCLCVN---SDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA---------------------- 65 (161)
Q Consensus 11 ~~~~~~v~~~~~~---~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~---------------------- 65 (161)
+.+...|..++|+ |+|-.|++++- ||.=.|=+-.+|.-+-+|.||++.|++.+
T Consensus 11 ~ghtrpvvdl~~s~itp~g~flisa~k--d~~pmlr~g~tgdwigtfeghkgavw~~~l~~na~~aasaaadftakvw~a 88 (334)
T KOG0278|consen 11 HGHTRPVVDLAFSPITPDGYFLISASK--DGKPMLRNGDTGDWIGTFEGHKGAVWSATLNKNATRAASAAADFTAKVWDA 88 (334)
T ss_pred cCCCcceeEEeccCCCCCceEEEEecc--CCCchhccCCCCCcEEeeeccCcceeeeecCchhhhhhhhcccchhhhhhh
Confidence 4477778888886 48988888664 88888877888888888888888888666
Q ss_pred -------------------------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCe
Q psy505 66 -------------------------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRK 119 (161)
Q Consensus 66 -------------------------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~ 119 (161)
+|.+|+.+. +||||++.-+-..+.+++|.+ .|..+.|......+.|..+|++
T Consensus 89 ~tgdelhsf~hkhivk~~af~~ds~~lltgg~ekllrvfdln~p~App~E~~ghtg--~Ir~v~wc~eD~~iLSSadd~t 166 (334)
T KOG0278|consen 89 VTGDELHSFEHKHIVKAVAFSQDSNYLLTGGQEKLLRVFDLNRPKAPPKEISGHTG--GIRTVLWCHEDKCILSSADDKT 166 (334)
T ss_pred hhhhhhhhhhhhheeeeEEecccchhhhccchHHHhhhhhccCCCCCchhhcCCCC--cceeEEEeccCceEEeeccCCc
Confidence 444444444 555554332211123345554 3566677766666777678999
Q ss_pred EEEEecCCCCeEEEEEecCceEEEEECCcEEE
Q psy505 120 LTVCHFKRGSEICNYSFSNTILAVKLNRKKEE 151 (161)
Q Consensus 120 i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~v 151 (161)
||+||.++++.++++.++++|.++.+++++=+
T Consensus 167 VRLWD~rTgt~v~sL~~~s~VtSlEvs~dG~i 198 (334)
T KOG0278|consen 167 VRLWDHRTGTEVQSLEFNSPVTSLEVSQDGRI 198 (334)
T ss_pred eEEEEeccCcEEEEEecCCCCcceeeccCCCE
Confidence 99999999999999999999999999998433
|
|
| >KOG0301|consensus | Back alignment and domain information |
|---|
Probab=99.57 E-value=2.1e-14 Score=122.31 Aligned_cols=139 Identities=13% Similarity=0.197 Sum_probs=107.2
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCc-eE
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YR 76 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-ir 76 (161)
+++++ .+|.. .||+++...++. +++++. |.++|+|-. +++...++||+.+|+++. .+.|||.|. ||
T Consensus 93 P~~~L-kgH~s--nVC~ls~~~~~~-~iSgSW--D~TakvW~~--~~l~~~l~gH~asVWAv~~l~e~~~vTgsaDKtIk 164 (745)
T KOG0301|consen 93 PLYTL-KGHKS--NVCSLSIGEDGT-LISGSW--DSTAKVWRI--GELVYSLQGHTASVWAVASLPENTYVTGSADKTIK 164 (745)
T ss_pred chhhh-hcccc--ceeeeecCCcCc-eEeccc--ccceEEecc--hhhhcccCCcchheeeeeecCCCcEEeccCcceee
Confidence 45566 44443 599999877776 776555 999999986 577888999999999999 888999999 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEE-ECCcEEEEEe
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVK-LNRKKEEEED 154 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~-~~~~~~vv~~ 154 (161)
+|.-. + +.+++.||.+ .|..+++=++.- ++|++.|+.|++||+ +|.++.++. |.+-|+++. +.++.++|.+
T Consensus 165 lWk~~--~-~l~tf~gHtD--~VRgL~vl~~~~-flScsNDg~Ir~w~~-~ge~l~~~~ghtn~vYsis~~~~~~~Ivs~ 237 (745)
T KOG0301|consen 165 LWKGG--T-LLKTFSGHTD--CVRGLAVLDDSH-FLSCSNDGSIRLWDL-DGEVLLEMHGHTNFVYSISMALSDGLIVST 237 (745)
T ss_pred eccCC--c-hhhhhccchh--heeeeEEecCCC-eEeecCCceEEEEec-cCceeeeeeccceEEEEEEecCCCCeEEEe
Confidence 99973 3 3478899975 467777776632 456668999999999 788888875 789999999 5556666655
Q ss_pred cc
Q psy505 155 EE 156 (161)
Q Consensus 155 ~~ 156 (161)
.|
T Consensus 238 gE 239 (745)
T KOG0301|consen 238 GE 239 (745)
T ss_pred cC
Confidence 44
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.4e-13 Score=119.31 Aligned_cols=135 Identities=14% Similarity=0.167 Sum_probs=109.4
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeee---eccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMI---PAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l---~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
.+.+++.++=|+....+.+ .|+|-++|+++|.....+ .+|.++|++++ .+.|++.+| ++.||..+...
T Consensus 450 ~~~av~vs~CGNF~~IG~S--~G~Id~fNmQSGi~r~sf~~~~ah~~~V~gla~D~~n~~~vsa~~~Gilkfw~f~~k~l 527 (910)
T KOG1539|consen 450 NATAVCVSFCGNFVFIGYS--KGTIDRFNMQSGIHRKSFGDSPAHKGEVTGLAVDGTNRLLVSAGADGILKFWDFKKKVL 527 (910)
T ss_pred ceEEEEEeccCceEEEecc--CCeEEEEEcccCeeecccccCccccCceeEEEecCCCceEEEccCcceEEEEecCCcce
Confidence 4556666666766666555 799999999999999999 69999999999 788999999 99999765431
Q ss_pred ee----------------------------------------eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEec
Q psy505 86 LE----------------------------------------QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125 (161)
Q Consensus 86 ~~----------------------------------------~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~ 125 (161)
+. +.+.||+ -.+.+|+|||++.++++++-|++|++||+
T Consensus 528 ~~~l~l~~~~~~iv~hr~s~l~a~~~ddf~I~vvD~~t~kvvR~f~gh~--nritd~~FS~DgrWlisasmD~tIr~wDl 605 (910)
T KOG1539|consen 528 KKSLRLGSSITGIVYHRVSDLLAIALDDFSIRVVDVVTRKVVREFWGHG--NRITDMTFSPDGRWLISASMDSTIRTWDL 605 (910)
T ss_pred eeeeccCCCcceeeeeehhhhhhhhcCceeEEEEEchhhhhhHHhhccc--cceeeeEeCCCCcEEEEeecCCcEEEEec
Confidence 11 1122343 35889999999999999999999999999
Q ss_pred CCCCeEEEEEecCceEEEEECCc--EEEEEe
Q psy505 126 KRGSEICNYSFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 126 ~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~ 154 (161)
-++.+|--+...++..++.|||+ .|+++-
T Consensus 606 pt~~lID~~~vd~~~~sls~SPngD~LAT~H 636 (910)
T KOG1539|consen 606 PTGTLIDGLLVDSPCTSLSFSPNGDFLATVH 636 (910)
T ss_pred cCcceeeeEecCCcceeeEECCCCCEEEEEE
Confidence 99999999999999999999996 555543
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=6.4e-14 Score=113.91 Aligned_cols=151 Identities=18% Similarity=0.230 Sum_probs=108.5
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee------eEEEecCC
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA------SLSVGTKS 73 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~------~lasgs~d 73 (161)
+|+.+|+ .++.+| |..+.++||..+++++|. |-.+++||+.+|.+.+.+. +|...+.|++ .+++||.|
T Consensus 259 ~kl~~tl-vgh~~~--V~yi~wSPDdryLlaCg~--~e~~~lwDv~tgd~~~~y~~~~~~S~~sc~W~pDg~~~V~Gs~d 333 (519)
T KOG0293|consen 259 FKLKKTL-VGHSQP--VSYIMWSPDDRYLLACGF--DEVLSLWDVDTGDLRHLYPSGLGFSVSSCAWCPDGFRFVTGSPD 333 (519)
T ss_pred eeeeeee-ecccCc--eEEEEECCCCCeEEecCc--hHheeeccCCcchhhhhcccCcCCCcceeEEccCCceeEecCCC
Confidence 4788999 676665 888899999999999887 7889999999999887774 5566777776 66777777
Q ss_pred c-eEEEEeCC----------------------cCc---------------------------------------------
Q psy505 74 G-YRLFSLNS----------------------IDT--------------------------------------------- 85 (161)
Q Consensus 74 g-iriwd~~~----------------------~~~--------------------------------------------- 85 (161)
+ |-.||+.- |+.
T Consensus 334 r~i~~wdlDgn~~~~W~gvr~~~v~dlait~Dgk~vl~v~~d~~i~l~~~e~~~dr~lise~~~its~~iS~d~k~~Lvn 413 (519)
T KOG0293|consen 334 RTIIMWDLDGNILGNWEGVRDPKVHDLAITYDGKYVLLVTVDKKIRLYNREARVDRGLISEEQPITSFSISKDGKLALVN 413 (519)
T ss_pred CcEEEecCCcchhhcccccccceeEEEEEcCCCcEEEEEecccceeeechhhhhhhccccccCceeEEEEcCCCcEEEEE
Confidence 6 66665421 100
Q ss_pred ---------------eeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 86 ---------------LEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 86 ---------------~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
+..-+.||.-.-.++.-+|-. |...++||++|..|.||+-.+|+++.+++ |...|++|++||.
T Consensus 414 L~~qei~LWDl~e~~lv~kY~Ghkq~~fiIrSCFgg~~~~fiaSGSED~kvyIWhr~sgkll~~LsGHs~~vNcVswNP~ 493 (519)
T KOG0293|consen 414 LQDQEIHLWDLEENKLVRKYFGHKQGHFIIRSCFGGGNDKFIASGSEDSKVYIWHRISGKLLAVLSGHSKTVNCVSWNPA 493 (519)
T ss_pred cccCeeEEeecchhhHHHHhhcccccceEEEeccCCCCcceEEecCCCceEEEEEccCCceeEeecCCcceeeEEecCCC
Confidence 000111222112333334543 44568899999999999999999999998 6789999999996
Q ss_pred ---EEEEEecc
Q psy505 149 ---KEEEEDEE 156 (161)
Q Consensus 149 ---~~vv~~~~ 156 (161)
.++-+.+|
T Consensus 494 ~p~m~ASasDD 504 (519)
T KOG0293|consen 494 DPEMFASASDD 504 (519)
T ss_pred CHHHhhccCCC
Confidence 66666665
|
|
| >KOG0643|consensus | Back alignment and domain information |
|---|
Probab=99.55 E-value=1.9e-13 Score=105.99 Aligned_cols=136 Identities=11% Similarity=0.151 Sum_probs=109.6
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee---------------------------
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------------------------- 65 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------------------------- 65 (161)
|...|-++..+-+...+++++. |.+++|||+.+|+++.+++- ..+|+.+.
T Consensus 51 HtGavW~~Did~~s~~liTGSA--D~t~kLWDv~tGk~la~~k~-~~~Vk~~~F~~~gn~~l~~tD~~mg~~~~v~~fdi 127 (327)
T KOG0643|consen 51 HTGAVWCCDIDWDSKHLITGSA--DQTAKLWDVETGKQLATWKT-NSPVKRVDFSFGGNLILASTDKQMGYTCFVSVFDI 127 (327)
T ss_pred CCceEEEEEecCCcceeeeccc--cceeEEEEcCCCcEEEEeec-CCeeEEEeeccCCcEEEEEehhhcCcceEEEEEEc
Confidence 4445777777878889998554 99999999999988876642 12232111
Q ss_pred ---------------------------------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEE
Q psy505 66 ---------------------------------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAV 111 (161)
Q Consensus 66 ---------------------------------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~ 111 (161)
++++|-+|| |.+||+++|+.+.+.-+-|+. .|..|.|+++...+
T Consensus 128 ~~~~~~~~s~ep~~kI~t~~skit~a~Wg~l~~~ii~Ghe~G~is~~da~~g~~~v~s~~~h~~--~Ind~q~s~d~T~F 205 (327)
T KOG0643|consen 128 RDDSSDIDSEEPYLKIPTPDSKITSALWGPLGETIIAGHEDGSISIYDARTGKELVDSDEEHSS--KINDLQFSRDRTYF 205 (327)
T ss_pred cCChhhhcccCceEEecCCccceeeeeecccCCEEEEecCCCcEEEEEcccCceeeechhhhcc--ccccccccCCcceE
Confidence 899999999 999999999766555555654 68899999999999
Q ss_pred EecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEE
Q psy505 112 VSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEE 153 (161)
Q Consensus 112 ~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~ 153 (161)
+.++.|.+-++||+.+=+++.++.-..+|++.+++|. ++++.
T Consensus 206 iT~s~Dttakl~D~~tl~v~Kty~te~PvN~aaisP~~d~Vilg 249 (327)
T KOG0643|consen 206 ITGSKDTTAKLVDVRTLEVLKTYTTERPVNTAAISPLLDHVILG 249 (327)
T ss_pred EecccCccceeeeccceeeEEEeeecccccceecccccceEEec
Confidence 9999999999999999999999998999999999995 44443
|
|
| >KOG1446|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=4.7e-13 Score=105.34 Aligned_cols=136 Identities=10% Similarity=0.065 Sum_probs=109.7
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecC--Cc-eEEEEeCCcCc
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTK--SG-YRLFSLNSIDT 85 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~--dg-iriwd~~~~~~ 85 (161)
.-+.++.|+++|..+++++. |-+++|||..+++.++++.-++-.|..+. .+..+|. |. ||.-++.+-+.
T Consensus 15 ~~i~sl~fs~~G~~litss~--dDsl~LYd~~~g~~~~ti~skkyG~~~~~Fth~~~~~i~sStk~d~tIryLsl~dNky 92 (311)
T KOG1446|consen 15 GKINSLDFSDDGLLLITSSE--DDSLRLYDSLSGKQVKTINSKKYGVDLACFTHHSNTVIHSSTKEDDTIRYLSLHDNKY 92 (311)
T ss_pred CceeEEEecCCCCEEEEecC--CCeEEEEEcCCCceeeEeecccccccEEEEecCCceEEEccCCCCCceEEEEeecCce
Confidence 45889999999999999665 88999999999999999988777777666 4444554 44 99999988665
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEecc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~~~ 156 (161)
+ +.+.||.. .|.++.-+|-.-.+.|++-|++|++||++..+|...+.-..+.. ++|.|++|+.|+..
T Consensus 93 l-RYF~GH~~--~V~sL~~sP~~d~FlS~S~D~tvrLWDlR~~~cqg~l~~~~~pi-~AfDp~GLifA~~~ 159 (311)
T KOG1446|consen 93 L-RYFPGHKK--RVNSLSVSPKDDTFLSSSLDKTVRLWDLRVKKCQGLLNLSGRPI-AAFDPEGLIFALAN 159 (311)
T ss_pred E-EEcCCCCc--eEEEEEecCCCCeEEecccCCeEEeeEecCCCCceEEecCCCcc-eeECCCCcEEEEec
Confidence 5 78899975 57888889977788899999999999999999877776544333 78999988777654
|
|
| >KOG0308|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=1.3e-13 Score=117.01 Aligned_cols=129 Identities=16% Similarity=0.222 Sum_probs=103.6
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+-.++++|+.++.|..++++|- .+.+|+||.++++.+..|+||++.|+++- .+.|||.|| ||+||+...++
T Consensus 170 ~k~siYSLA~N~t~t~ivsGgt--ek~lr~wDprt~~kimkLrGHTdNVr~ll~~dDGt~~ls~sSDgtIrlWdLgqQrC 247 (735)
T KOG0308|consen 170 PKDSIYSLAMNQTGTIIVSGGT--EKDLRLWDPRTCKKIMKLRGHTDNVRVLLVNDDGTRLLSASSDGTIRLWDLGQQRC 247 (735)
T ss_pred CccceeeeecCCcceEEEecCc--ccceEEeccccccceeeeeccccceEEEEEcCCCCeEeecCCCceEEeeeccccce
Confidence 3457999999999988887665 89999999999999999999999999998 899999999 99999988777
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC-eEEEEEecCceEEEEEC
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS-EICNYSFSNTILAVKLN 146 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~-~i~~l~~~~~V~~v~~~ 146 (161)
+ ..+.-|... +-++.-+|++..+.+|+.|+.|..=|+++.+ +...++-..+|..+.++
T Consensus 248 l-~T~~vH~e~--VWaL~~~~sf~~vYsG~rd~~i~~Tdl~n~~~~tlick~daPv~~l~~~ 306 (735)
T KOG0308|consen 248 L-ATYIVHKEG--VWALQSSPSFTHVYSGGRDGNIYRTDLRNPAKSTLICKEDAPVLKLHLH 306 (735)
T ss_pred e-eeEEeccCc--eEEEeeCCCcceEEecCCCCcEEecccCCchhheEeecCCCchhhhhhc
Confidence 6 456777755 5566677999999999999999999998742 22122223456665554
|
|
| >KOG2110|consensus | Back alignment and domain information |
|---|
Probab=99.54 E-value=6.6e-14 Score=112.24 Aligned_cols=91 Identities=48% Similarity=0.739 Sum_probs=80.8
Q ss_pred eEEEecCCceEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEE
Q psy505 66 SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKL 145 (161)
Q Consensus 66 ~lasgs~dgiriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~ 145 (161)
+|+.|+.||.++|+.+.-+ +++.-..++..|++|.||++..++|+...++.+++.+++++..||++.|+++|++|+|
T Consensus 19 ~lsvGs~~Gyk~~~~~~~~---k~~~~~~~~~~IvEmLFSSSLvaiV~~~qpr~Lkv~~~Kk~~~ICe~~fpt~IL~Vrm 95 (391)
T KOG2110|consen 19 LLSVGSKDGYKIFSCSPFE---KCFSKDTEGVSIVEMLFSSSLVAIVSIKQPRKLKVVHFKKKTTICEIFFPTSILAVRM 95 (391)
T ss_pred EEEccCCCceeEEecCchH---HhhcccCCCeEEEEeecccceeEEEecCCCceEEEEEcccCceEEEEecCCceEEEEE
Confidence 6889999999999995433 3443334678899999999999999988888999999999999999999999999999
Q ss_pred CCcEEEEEecccee
Q psy505 146 NRKKEEEEDEEEEK 159 (161)
Q Consensus 146 ~~~~~vv~~~~~~~ 159 (161)
|++||+|||+++||
T Consensus 96 Nr~RLvV~Lee~Iy 109 (391)
T KOG2110|consen 96 NRKRLVVCLEESIY 109 (391)
T ss_pred ccceEEEEEcccEE
Confidence 99999999999987
|
|
| >KOG0973|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-13 Score=121.27 Aligned_cols=139 Identities=14% Similarity=0.168 Sum_probs=113.5
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC-------C-----------CceeeeeccCccceeee------eEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-------L-----------HAKTMIPAHDSPLAALA------SLS 68 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-------~-----------~~~~~l~~H~~~V~~l~------~la 68 (161)
+...|.++-|+|||.++|+++. |+.|.||+... | +++..|.+|.+.|.+++ +||
T Consensus 68 h~~sv~CVR~S~dG~~lAsGSD--D~~v~iW~~~~~~~~~~fgs~g~~~~vE~wk~~~~l~~H~~DV~Dv~Wsp~~~~lv 145 (942)
T KOG0973|consen 68 HDGSVNCVRFSPDGSYLASGSD--DRLVMIWERAEIGSGTVFGSTGGAKNVESWKVVSILRGHDSDVLDVNWSPDDSLLV 145 (942)
T ss_pred ccCceeEEEECCCCCeEeeccC--cceEEEeeecccCCcccccccccccccceeeEEEEEecCCCccceeccCCCccEEE
Confidence 3445888889999999999765 99999999873 1 36788999999999999 999
Q ss_pred EecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--ec-----Cce
Q psy505 69 VGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--FS-----NTI 140 (161)
Q Consensus 69 sgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--~~-----~~V 140 (161)
++|.|+ |-|||.++.+.+ +.+++|.+ .|-.+.|.|-|.+++|-++|++|+||++..-.+...+. |. ...
T Consensus 146 S~s~DnsViiwn~~tF~~~-~vl~~H~s--~VKGvs~DP~Gky~ASqsdDrtikvwrt~dw~i~k~It~pf~~~~~~T~f 222 (942)
T KOG0973|consen 146 SVSLDNSVIIWNAKTFELL-KVLRGHQS--LVKGVSWDPIGKYFASQSDDRTLKVWRTSDWGIEKSITKPFEESPLTTFF 222 (942)
T ss_pred EecccceEEEEccccceee-eeeecccc--cccceEECCccCeeeeecCCceEEEEEcccceeeEeeccchhhCCCccee
Confidence 999999 999999998654 67888875 47788999999999999999999999977655555553 32 468
Q ss_pred EEEEECCcEEEEEecc
Q psy505 141 LAVKLNRKKEEEEDEE 156 (161)
Q Consensus 141 ~~v~~~~~~~vv~~~~ 156 (161)
+.+-||||+-.++..+
T Consensus 223 ~RlSWSPDG~~las~n 238 (942)
T KOG0973|consen 223 LRLSWSPDGHHLASPN 238 (942)
T ss_pred eecccCCCcCeecchh
Confidence 8899999965555433
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=8.9e-13 Score=105.66 Aligned_cols=139 Identities=10% Similarity=0.079 Sum_probs=113.9
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
|...|++++.+|+.+++|++|. |---.||+..+|..+..+.+|++.|.++. +||+|..+| ++||+..+|..
T Consensus 63 H~~svFavsl~P~~~l~aTGGg--DD~AflW~~~~ge~~~eltgHKDSVt~~~FshdgtlLATGdmsG~v~v~~~stg~~ 140 (399)
T KOG0296|consen 63 HTDSVFAVSLHPNNNLVATGGG--DDLAFLWDISTGEFAGELTGHKDSVTCCSFSHDGTLLATGDMSGKVLVFKVSTGGE 140 (399)
T ss_pred cCCceEEEEeCCCCceEEecCC--CceEEEEEccCCcceeEecCCCCceEEEEEccCceEEEecCCCccEEEEEcccCce
Confidence 4556999999998878887665 88999999999999999999999999999 999999999 99999999875
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
...+. +..+ -+.-|.|+|....++.|+.|+.+-.|.+..+.....+. +..++.+=+|.|+ ++.....+
T Consensus 141 ~~~~~-~e~~--dieWl~WHp~a~illAG~~DGsvWmw~ip~~~~~kv~~Gh~~~ct~G~f~pdGKr~~tgy~d 211 (399)
T KOG0296|consen 141 QWKLD-QEVE--DIEWLKWHPRAHILLAGSTDGSVWMWQIPSQALCKVMSGHNSPCTCGEFIPDGKRILTGYDD 211 (399)
T ss_pred EEEee-cccC--ceEEEEecccccEEEeecCCCcEEEEECCCcceeeEecCCCCCcccccccCCCceEEEEecC
Confidence 54443 2222 26678899988888888999999999999876656665 5789999999997 45544444
|
|
| >KOG0283|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.6e-13 Score=118.61 Aligned_cols=139 Identities=12% Similarity=0.131 Sum_probs=104.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~ 84 (161)
|..-|..++++.++ +|.+++- |.|||||++....|+..|. |.+-|+||+ ||+|||-|| +|||++...+
T Consensus 368 Ht~DILDlSWSKn~-fLLSSSM--DKTVRLWh~~~~~CL~~F~-HndfVTcVaFnPvDDryFiSGSLD~KvRiWsI~d~~ 443 (712)
T KOG0283|consen 368 HTADILDLSWSKNN-FLLSSSM--DKTVRLWHPGRKECLKVFS-HNDFVTCVAFNPVDDRYFISGSLDGKVRLWSISDKK 443 (712)
T ss_pred cchhheecccccCC-eeEeccc--cccEEeecCCCcceeeEEe-cCCeeEEEEecccCCCcEeecccccceEEeecCcCe
Confidence 34447788888765 6666565 9999999999999999995 999999999 999999999 9999996533
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--ec-------CceEEEEECC---cEEEE
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--FS-------NTILAVKLNR---KKEEE 152 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--~~-------~~V~~v~~~~---~~~vv 152 (161)
+..-..-+ --|.+++|+|+|.+.+-|+-++.+++|+.+..+...... .+ ..|.+++|.| +++.|
T Consensus 444 -Vv~W~Dl~---~lITAvcy~PdGk~avIGt~~G~C~fY~t~~lk~~~~~~I~~~~~Kk~~~~rITG~Q~~p~~~~~vLV 519 (712)
T KOG0283|consen 444 -VVDWNDLR---DLITAVCYSPDGKGAVIGTFNGYCRFYDTEGLKLVSDFHIRLHNKKKKQGKRITGLQFFPGDPDEVLV 519 (712)
T ss_pred -eEeehhhh---hhheeEEeccCCceEEEEEeccEEEEEEccCCeEEEeeeEeeccCccccCceeeeeEecCCCCCeEEE
Confidence 21111112 247789999999988888788899999999887766543 11 2699999975 44555
Q ss_pred Eecc-cee
Q psy505 153 EDEE-EEK 159 (161)
Q Consensus 153 ~~~~-~~~ 159 (161)
-..| +|+
T Consensus 520 TSnDSrIR 527 (712)
T KOG0283|consen 520 TSNDSRIR 527 (712)
T ss_pred ecCCCceE
Confidence 4444 443
|
|
| >KOG0278|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=3e-13 Score=104.30 Aligned_cols=138 Identities=14% Similarity=0.191 Sum_probs=106.2
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCceEEEEeCCcC
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSGYRLFSLNSID 84 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dgiriwd~~~~~ 84 (161)
..++.||..+-+....+.+.++.. |++||+||.++++.+++|+- .++|+++- +|..+-..+|+.||..+-+
T Consensus 140 ~ghtg~Ir~v~wc~eD~~iLSSad--d~tVRLWD~rTgt~v~sL~~-~s~VtSlEvs~dG~ilTia~gssV~Fwdaksf~ 216 (334)
T KOG0278|consen 140 SGHTGGIRTVLWCHEDKCILSSAD--DKTVRLWDHRTGTEVQSLEF-NSPVTSLEVSQDGRILTIAYGSSVKFWDAKSFG 216 (334)
T ss_pred cCCCCcceeEEEeccCceEEeecc--CCceEEEEeccCcEEEEEec-CCCCcceeeccCCCEEEEecCceeEEecccccc
Confidence 346778888888655556666544 99999999999999999874 56788877 4544433349999997765
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE-E-ecCceEEEEECCcEEEEEec
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY-S-FSNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l-~-~~~~V~~v~~~~~~~vv~~~ 155 (161)
.+ +.+. . +..|.+...+|+--.++.|++|..+..||..+|..+..+ + |.++|.+|+|+|++.+-+..
T Consensus 217 ~l-Ks~k--~-P~nV~SASL~P~k~~fVaGged~~~~kfDy~TgeEi~~~nkgh~gpVhcVrFSPdGE~yAsG 285 (334)
T KOG0278|consen 217 LL-KSYK--M-PCNVESASLHPKKEFFVAGGEDFKVYKFDYNTGEEIGSYNKGHFGPVHCVRFSPDGELYASG 285 (334)
T ss_pred ce-eecc--C-ccccccccccCCCceEEecCcceEEEEEeccCCceeeecccCCCCceEEEEECCCCceeecc
Confidence 44 2222 2 456778888898777888889999999999999999886 3 68999999999998776644
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.53 E-value=1.3e-13 Score=109.39 Aligned_cols=122 Identities=13% Similarity=0.220 Sum_probs=98.8
Q ss_pred CcceEEecCCCCCCceeEEeec--CC--CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEE
Q psy505 1 MKVLHTIRDTPPNPNGICCLCV--NS--DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSV 69 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~--~~--d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~las 69 (161)
|++|+++ ....++...+..+. .. ...++|.+|. -|.|||-|+.++++...+.||.+.|+.+. ++.+
T Consensus 77 ir~lq~y-~D~d~~Esfytcsw~yd~~~~~p~la~~G~--~GvIrVid~~~~~~~~~~~ghG~sINeik~~p~~~qlvls 153 (385)
T KOG1034|consen 77 IRLLQSY-ADEDHDESFYTCSWSYDSNTGNPFLAAGGY--LGVIRVIDVVSGQCSKNYRGHGGSINEIKFHPDRPQLVLS 153 (385)
T ss_pred eeeeeec-cCCCCCcceEEEEEEecCCCCCeeEEeecc--eeEEEEEecchhhhccceeccCccchhhhcCCCCCcEEEE
Confidence 4677777 55555555554444 22 2457788775 79999999999999999999999999998 9999
Q ss_pred ecCCc-eEEEEeCCcCceeeEEe---ecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC
Q psy505 70 GTKSG-YRLFSLNSIDTLEQIYE---NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG 128 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~~~~~~---~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~ 128 (161)
||.|. ||+||+++..++ .++. ||.+ .|.++.|++++..++|++-|.+|++|++...
T Consensus 154 ~SkD~svRlwnI~~~~Cv-~VfGG~egHrd--eVLSvD~~~~gd~i~ScGmDhslk~W~l~~~ 213 (385)
T KOG1034|consen 154 ASKDHSVRLWNIQTDVCV-AVFGGVEGHRD--EVLSVDFSLDGDRIASCGMDHSLKLWRLNVK 213 (385)
T ss_pred ecCCceEEEEeccCCeEE-EEecccccccC--cEEEEEEcCCCCeeeccCCcceEEEEecChh
Confidence 99999 999999998766 4554 4654 5889999999999999999999999999843
|
|
| >KOG0306|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.9e-13 Score=117.55 Aligned_cols=135 Identities=13% Similarity=0.171 Sum_probs=117.0
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCce
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~ 86 (161)
+.-|.+++++|||.+||.+-- |.+|+||-+.+.+.--+|-||.=||.|+. ++++||.|. ||||-+.-|++.
T Consensus 508 ~ddvL~v~~Spdgk~LaVsLL--dnTVkVyflDtlKFflsLYGHkLPV~smDIS~DSklivTgSADKnVKiWGLdFGDCH 585 (888)
T KOG0306|consen 508 EDDVLCVSVSPDGKLLAVSLL--DNTVKVYFLDTLKFFLSLYGHKLPVLSMDISPDSKLIVTGSADKNVKIWGLDFGDCH 585 (888)
T ss_pred cccEEEEEEcCCCcEEEEEec--cCeEEEEEecceeeeeeecccccceeEEeccCCcCeEEeccCCCceEEeccccchhh
Confidence 456889999999999999766 99999999999998889999999999998 999999999 999999999866
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEE
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEE 153 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~ 153 (161)
+.+-+|.+ .|.++.|-|....+-+++.|+.||-||-.+=++++.+. |...|++++..|++=.||
T Consensus 586 -KS~fAHdD--Svm~V~F~P~~~~FFt~gKD~kvKqWDg~kFe~iq~L~~H~~ev~cLav~~~G~~vv 650 (888)
T KOG0306|consen 586 -KSFFAHDD--SVMSVQFLPKTHLFFTCGKDGKVKQWDGEKFEEIQKLDGHHSEVWCLAVSPNGSFVV 650 (888)
T ss_pred -hhhhcccC--ceeEEEEcccceeEEEecCcceEEeechhhhhhheeeccchheeeeeEEcCCCCeEE
Confidence 45556764 47788899987777777899999999999888888885 789999999999964444
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=1.4e-13 Score=118.21 Aligned_cols=144 Identities=17% Similarity=0.287 Sum_probs=110.7
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------------------------
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------------------------- 65 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------------------------- 65 (161)
.+...|+.+++.+|||++||+ |.. -|++||+|+.+-+....++||+.+|-|+.
T Consensus 456 ~d~r~G~R~~~vSp~gqhLAs-GDr-~GnlrVy~Lq~l~~~~~~eAHesEilcLeyS~p~~~~kLLASasrdRlIHV~Dv 533 (1080)
T KOG1408|consen 456 CDSRFGFRALAVSPDGQHLAS-GDR-GGNLRVYDLQELEYTCFMEAHESEILCLEYSFPVLTNKLLASASRDRLIHVYDV 533 (1080)
T ss_pred cCcccceEEEEECCCcceecc-cCc-cCceEEEEehhhhhhhheecccceeEEEeecCchhhhHhhhhccCCceEEEEec
Confidence 344558999999999999998 443 78999999988766666677776665443
Q ss_pred ----------------------------------------------------------------------------eEEE
Q psy505 66 ----------------------------------------------------------------------------SLSV 69 (161)
Q Consensus 66 ----------------------------------------------------------------------------~las 69 (161)
++++
T Consensus 534 ~rny~l~qtld~HSssITsvKFa~~gln~~MiscGADksimFr~~qk~~~g~~f~r~t~t~~ktTlYDm~Vdp~~k~v~t 613 (1080)
T KOG1408|consen 534 KRNYDLVQTLDGHSSSITSVKFACNGLNRKMISCGADKSIMFRVNQKASSGRLFPRHTQTLSKTTLYDMAVDPTSKLVVT 613 (1080)
T ss_pred ccccchhhhhcccccceeEEEEeecCCceEEEeccCchhhheehhccccCceeccccccccccceEEEeeeCCCcceEEE
Confidence 6777
Q ss_pred ecCCc-eEEEEeCCcCceeeEEee-cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEEC
Q psy505 70 GTKSG-YRLFSLNSIDTLEQIYEN-SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLN 146 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~~~~~~~-~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~ 146 (161)
+..|. |||||+++|+.. +.|.| |.+.-..+.+...|++++++....|+++-++|+.+|+|+..+. |...|.+++|.
T Consensus 614 ~cQDrnirif~i~sgKq~-k~FKgs~~~eG~lIKv~lDPSgiY~atScsdktl~~~Df~sgEcvA~m~GHsE~VTG~kF~ 692 (1080)
T KOG1408|consen 614 VCQDRNIRIFDIESGKQV-KSFKGSRDHEGDLIKVILDPSGIYLATSCSDKTLCFVDFVSGECVAQMTGHSEAVTGVKFL 692 (1080)
T ss_pred EecccceEEEecccccee-eeecccccCCCceEEEEECCCccEEEEeecCCceEEEEeccchhhhhhcCcchheeeeeec
Confidence 77777 888888887754 45544 2211135566788999999988889999999999999998865 78899999999
Q ss_pred Cc--EEEEEeccc
Q psy505 147 RK--KEEEEDEEE 157 (161)
Q Consensus 147 ~~--~~vv~~~~~ 157 (161)
+| +|+-|-.|-
T Consensus 693 nDCkHlISvsgDg 705 (1080)
T KOG1408|consen 693 NDCKHLISVSGDG 705 (1080)
T ss_pred ccchhheeecCCc
Confidence 98 777766553
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.52 E-value=6e-14 Score=116.62 Aligned_cols=148 Identities=15% Similarity=0.146 Sum_probs=103.9
Q ss_pred CCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-ceeeee-----ccCccceeee------eEEEecCCc-eE
Q psy505 10 TPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-AKTMIP-----AHDSPLAALA------SLSVGTKSG-YR 76 (161)
Q Consensus 10 ~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-~~~~l~-----~H~~~V~~l~------~lasgs~dg-ir 76 (161)
|-.|..++.+-+++|+.+-...+.+. ||++||||+..-+ .+..|. +-.-++.+++ ++|+|..|| |+
T Consensus 264 TKGHia~lt~g~whP~~k~~FlT~s~-DgtlRiWdv~~~k~q~qVik~k~~~g~Rv~~tsC~~nrdg~~iAagc~DGSIQ 342 (641)
T KOG0772|consen 264 TKGHIAELTCGCWHPDNKEEFLTCSY-DGTLRIWDVNNTKSQLQVIKTKPAGGKRVPVTSCAWNRDGKLIAAGCLDGSIQ 342 (641)
T ss_pred cCCceeeeeccccccCcccceEEecC-CCcEEEEecCCchhheeEEeeccCCCcccCceeeecCCCcchhhhcccCCcee
Confidence 34455677888899976544444453 9999999998643 333342 3344566666 999999999 99
Q ss_pred EEEeCCc--CceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCC-CCeEEEEE-e--cCceEEEEECCcEE
Q psy505 77 LFSLNSI--DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR-GSEICNYS-F--SNTILAVKLNRKKE 150 (161)
Q Consensus 77 iwd~~~~--~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~-~~~i~~l~-~--~~~V~~v~~~~~~~ 150 (161)
+||..+. .+...+...|.+...+.++.||+++..|+|-+.|+++|+||++. .+++.... . .-+-..+.|||+--
T Consensus 343 ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~kkpL~~~tgL~t~~~~tdc~FSPd~k 422 (641)
T KOG0772|consen 343 IWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFKKPLNVRTGLPTPFPGTDCCFSPDDK 422 (641)
T ss_pred eeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccccchhhhcCCCccCCCCccccCCCce
Confidence 9997432 22333445676655688999999999999999999999999987 44554433 1 23567799999866
Q ss_pred EEEeccce
Q psy505 151 EEEDEEEE 158 (161)
Q Consensus 151 vv~~~~~~ 158 (161)
++++...+
T Consensus 423 li~TGtS~ 430 (641)
T KOG0772|consen 423 LILTGTSA 430 (641)
T ss_pred EEEecccc
Confidence 66655543
|
|
| >KOG0293|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=2.5e-13 Score=110.54 Aligned_cols=132 Identities=12% Similarity=0.131 Sum_probs=105.1
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC---CceeeeeccCccceeee------eEEEecCCc-eEEEEeC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL---HAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~---~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~ 81 (161)
.+.+-|--+.|+++|++||+++. |.+.-||++..- +..+++.+|..+|.-+. +|.+|+.|- +++||+.
T Consensus 222 ~htdEVWfl~FS~nGkyLAsaSk--D~Taiiw~v~~d~~~kl~~tlvgh~~~V~yi~wSPDdryLlaCg~~e~~~lwDv~ 299 (519)
T KOG0293|consen 222 DHTDEVWFLQFSHNGKYLASASK--DSTAIIWIVVYDVHFKLKKTLVGHSQPVSYIMWSPDDRYLLACGFDEVLSLWDVD 299 (519)
T ss_pred hCCCcEEEEEEcCCCeeEeeccC--CceEEEEEEecCcceeeeeeeecccCceEEEEECCCCCeEEecCchHheeeccCC
Confidence 34555788888999999999876 999999987654 45789999999999888 777777777 9999999
Q ss_pred CcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe--cCceEEEEECCc
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF--SNTILAVKLNRK 148 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~~ 148 (161)
+|+.....-.++ +.++.+.+|.||++-++.|+.|+++..||+. |+.+..... ...|..+++++|
T Consensus 300 tgd~~~~y~~~~--~~S~~sc~W~pDg~~~V~Gs~dr~i~~wdlD-gn~~~~W~gvr~~~v~dlait~D 365 (519)
T KOG0293|consen 300 TGDLRHLYPSGL--GFSVSSCAWCPDGFRFVTGSPDRTIIMWDLD-GNILGNWEGVRDPKVHDLAITYD 365 (519)
T ss_pred cchhhhhcccCc--CCCcceeEEccCCceeEecCCCCcEEEecCC-cchhhcccccccceeEEEEEcCC
Confidence 998764443443 3457788999999999999999999999986 444443333 246999999998
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=5.2e-14 Score=114.19 Aligned_cols=128 Identities=15% Similarity=0.241 Sum_probs=105.3
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
++.++.+++++.++++++. |+.+++||+.+.+..++|.||++.|+++. .+++|+.|. ||+||+..+.+...
T Consensus 221 ~it~~d~d~~~~~~iAas~--d~~~r~Wnvd~~r~~~TLsGHtdkVt~ak~~~~~~~vVsgs~DRtiK~WDl~k~~C~kt 298 (459)
T KOG0288|consen 221 NITSIDFDSDNKHVIAASN--DKNLRLWNVDSLRLRHTLSGHTDKVTAAKFKLSHSRVVSGSADRTIKLWDLQKAYCSKT 298 (459)
T ss_pred CcceeeecCCCceEEeecC--CCceeeeeccchhhhhhhcccccceeeehhhccccceeeccccchhhhhhhhhhheecc
Confidence 5889999999999888776 99999999999999999999999999988 588999999 99999988776654
Q ss_pred EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEE
Q psy505 89 IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEE 151 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~v 151 (161)
.+-+.. +..+.-+ ...+.||--|++|+.||.+...+..+....+.|.+|..+++++-
T Consensus 299 ~l~~S~----cnDI~~~--~~~~~SgH~DkkvRfwD~Rs~~~~~sv~~gg~vtSl~ls~~g~~ 355 (459)
T KOG0288|consen 299 VLPGSQ----CNDIVCS--ISDVISGHFDKKVRFWDIRSADKTRSVPLGGRVTSLDLSMDGLE 355 (459)
T ss_pred cccccc----ccceEec--ceeeeecccccceEEEeccCCceeeEeecCcceeeEeeccCCeE
Confidence 443322 2222223 44567787889999999999999988888889999999887543
|
|
| >KOG0640|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.7e-14 Score=110.30 Aligned_cols=141 Identities=14% Similarity=0.178 Sum_probs=108.9
Q ss_pred eEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC---ceeeeeccCccceeee------eEEEecCCc
Q psy505 4 LHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH---AKTMIPAHDSPLAALA------SLSVGTKSG 74 (161)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~---~~~~l~~H~~~V~~l~------~lasgs~dg 74 (161)
|.|+ . +|.+-|..+.|+|...+|++++. |++||++|...-. .-+.|+ ...+|++++ +|+.|++.-
T Consensus 165 IRTl-Y--DH~devn~l~FHPre~ILiS~sr--D~tvKlFDfsK~saKrA~K~~q-d~~~vrsiSfHPsGefllvgTdHp 238 (430)
T KOG0640|consen 165 IRTL-Y--DHVDEVNDLDFHPRETILISGSR--DNTVKLFDFSKTSAKRAFKVFQ-DTEPVRSISFHPSGEFLLVGTDHP 238 (430)
T ss_pred Eeeh-h--hccCcccceeecchhheEEeccC--CCeEEEEecccHHHHHHHHHhh-ccceeeeEeecCCCceEEEecCCC
Confidence 4455 3 34455889999999999998554 9999999987532 233444 357899999 999999988
Q ss_pred -eEEEEeCCcCceeeEE--eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--e-cCceEEEEECCc
Q psy505 75 -YRLFSLNSIDTLEQIY--ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--F-SNTILAVKLNRK 148 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~--~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--~-~~~V~~v~~~~~ 148 (161)
.|+||+.|-+++...- .+|.+ .|.++.||+++..-+.++.|+.|||||=-.++|+.++. | .+.|.+..|.++
T Consensus 239 ~~rlYdv~T~QcfvsanPd~qht~--ai~~V~Ys~t~~lYvTaSkDG~IklwDGVS~rCv~t~~~AH~gsevcSa~Ftkn 316 (430)
T KOG0640|consen 239 TLRLYDVNTYQCFVSANPDDQHTG--AITQVRYSSTGSLYVTASKDGAIKLWDGVSNRCVRTIGNAHGGSEVCSAVFTKN 316 (430)
T ss_pred ceeEEeccceeEeeecCccccccc--ceeEEEecCCccEEEEeccCCcEEeeccccHHHHHHHHhhcCCceeeeEEEccC
Confidence 9999998866542211 23443 58899999999989999999999999999999999885 4 478999999887
Q ss_pred EEEE
Q psy505 149 KEEE 152 (161)
Q Consensus 149 ~~vv 152 (161)
+-.+
T Consensus 317 ~kyi 320 (430)
T KOG0640|consen 317 GKYI 320 (430)
T ss_pred CeEE
Confidence 4443
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=3.7e-13 Score=109.92 Aligned_cols=144 Identities=13% Similarity=0.158 Sum_probs=106.3
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCc
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~ 83 (161)
.|++.|.+|+++.+-..+.++|+. |.+|++||+.+|+|..++..|.++|.++. .|.+||.|+ +++.|.+.-
T Consensus 241 gHTdavl~Ls~n~~~~nVLaSgsa-D~TV~lWD~~~g~p~~s~~~~~k~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~ 319 (463)
T KOG0270|consen 241 GHTDAVLALSWNRNFRNVLASGSA-DKTVKLWDVDTGKPKSSITHHGKKVQTLEWHPYEPSVLLSGSYDGTVALKDCRDP 319 (463)
T ss_pred cchHHHHHHHhccccceeEEecCC-CceEEEEEcCCCCcceehhhcCCceeEEEecCCCceEEEeccccceEEeeeccCc
Confidence 467778899998765555555665 99999999999999999999999999999 899999999 999999842
Q ss_pred CceeeEEeecCcceEEEEEeecC--CeEEEEecCCCCeEEEEecCCC-CeEEEEE-ecCceEEEEECCc---EEEEEecc
Q psy505 84 DTLEQIYENSQEDVCIVERLFSS--SLVAVVSLSSPRKLTVCHFKRG-SEICNYS-FSNTILAVKLNRK---KEEEEDEE 156 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~--~~~~~~s~~~d~~i~iWD~~~~-~~i~~l~-~~~~V~~v~~~~~---~~vv~~~~ 156 (161)
......++... . |-.++|.| -...++ +.+|++|+-+|.+.. +++-++. |.++|.++.+|+. .++.+..+
T Consensus 320 ~~s~~~wk~~g-~--VEkv~w~~~se~~f~~-~tddG~v~~~D~R~~~~~vwt~~AHd~~ISgl~~n~~~p~~l~t~s~d 395 (463)
T KOG0270|consen 320 SNSGKEWKFDG-E--VEKVAWDPHSENSFFV-STDDGTVYYFDIRNPGKPVWTLKAHDDEISGLSVNIQTPGLLSTASTD 395 (463)
T ss_pred cccCceEEecc-c--eEEEEecCCCceeEEE-ecCCceEEeeecCCCCCceeEEEeccCCcceEEecCCCCcceeecccc
Confidence 22223333322 2 44455543 222334 457899999999985 8888876 7889999999764 56665555
Q ss_pred ceee
Q psy505 157 EEKK 160 (161)
Q Consensus 157 ~~~~ 160 (161)
+.-|
T Consensus 396 ~~Vk 399 (463)
T KOG0270|consen 396 KVVK 399 (463)
T ss_pred ceEE
Confidence 5433
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-13 Score=105.77 Aligned_cols=141 Identities=16% Similarity=0.145 Sum_probs=106.8
Q ss_pred cceEEecCCCCCCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee--------eEEEe
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA--------SLSVG 70 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~--------~lasg 70 (161)
+++.++ .+|+-|.--.+.+ +| .|.+||+++. ||.|-||.-.+|+ ..+...+|...|++++ +||+|
T Consensus 47 ~ll~~L-~Gh~GPVwqv~wa-hPk~G~iLAScsY--DgkVIiWke~~g~w~k~~e~~~h~~SVNsV~wapheygl~Laca 122 (299)
T KOG1332|consen 47 KLLAEL-TGHSGPVWKVAWA-HPKFGTILASCSY--DGKVIIWKEENGRWTKAYEHAAHSASVNSVAWAPHEYGLLLACA 122 (299)
T ss_pred eeeeEe-cCCCCCeeEEeec-ccccCcEeeEeec--CceEEEEecCCCchhhhhhhhhhcccceeecccccccceEEEEe
Confidence 577788 6777775444444 55 7889998665 9999999999885 5677899999999999 99999
Q ss_pred cCCc-eEEEEeCCc-C-ceeeEEeecCcceEEEEEeecCC---e-----------EEEEecCCCCeEEEEecCCCCeE--
Q psy505 71 TKSG-YRLFSLNSI-D-TLEQIYENSQEDVCIVERLFSSS---L-----------VAVVSLSSPRKLTVCHFKRGSEI-- 131 (161)
Q Consensus 71 s~dg-iriwd~~~~-~-~~~~~~~~~~~~~~v~~~~fs~~---~-----------~~~~s~~~d~~i~iWD~~~~~~i-- 131 (161)
|.|| |+|.+.++. . ...++...| .+.|.++.+.|. + .-+|||+.|+.|+||+...++=+
T Consensus 123 sSDG~vsvl~~~~~g~w~t~ki~~aH--~~GvnsVswapa~~~g~~~~~~~~~~~krlvSgGcDn~VkiW~~~~~~w~~e 200 (299)
T KOG1332|consen 123 SSDGKVSVLTYDSSGGWTTSKIVFAH--EIGVNSVSWAPASAPGSLVDQGPAAKVKRLVSGGCDNLVKIWKFDSDSWKLE 200 (299)
T ss_pred eCCCcEEEEEEcCCCCccchhhhhcc--ccccceeeecCcCCCccccccCcccccceeeccCCccceeeeecCCcchhhh
Confidence 9999 999998653 1 122333445 455777778775 3 34889999999999999887433
Q ss_pred EEEE-ecCceEEEEECCc
Q psy505 132 CNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 132 ~~l~-~~~~V~~v~~~~~ 148 (161)
+.|. |.+.|..|++.|.
T Consensus 201 ~~l~~H~dwVRDVAwaP~ 218 (299)
T KOG1332|consen 201 RTLEGHKDWVRDVAWAPS 218 (299)
T ss_pred hhhhhcchhhhhhhhccc
Confidence 3354 7789999999885
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.3e-12 Score=108.86 Aligned_cols=139 Identities=9% Similarity=0.175 Sum_probs=113.6
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+...+.++.+-|...+-+.+++ +|++|.+++-...+-..+++.|..-|+|+. +||+++.|| +-|||-.+|+.
T Consensus 146 hSr~ins~~~KpsRPfRi~T~s-dDn~v~ffeGPPFKFk~s~r~HskFV~~VRysPDG~~Fat~gsDgki~iyDGktge~ 224 (603)
T KOG0318|consen 146 HSRRINSVDFKPSRPFRIATGS-DDNTVAFFEGPPFKFKSSFREHSKFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEK 224 (603)
T ss_pred cceeEeeeeccCCCceEEEecc-CCCeEEEeeCCCeeeeecccccccceeeEEECCCCCeEEEecCCccEEEEcCCCccE
Confidence 4556777777665544444455 399999999888899999999999999999 999999999 99999999997
Q ss_pred eeeEEe---ecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec----CceEEEEECCcEEEEEec
Q psy505 86 LEQIYE---NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS----NTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 86 ~~~~~~---~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~----~~V~~v~~~~~~~vv~~~ 155 (161)
+.+ +. +|.+ .|.+++|+||..-+++.+.|.++||||+.+++++.++... ++-.++-|-.++|+.|-.
T Consensus 225 vg~-l~~~~aHkG--sIfalsWsPDs~~~~T~SaDkt~KIWdVs~~slv~t~~~~~~v~dqqvG~lWqkd~lItVSl 298 (603)
T KOG0318|consen 225 VGE-LEDSDAHKG--SIFALSWSPDSTQFLTVSADKTIKIWDVSTNSLVSTWPMGSTVEDQQVGCLWQKDHLITVSL 298 (603)
T ss_pred EEE-ecCCCCccc--cEEEEEECCCCceEEEecCCceEEEEEeeccceEEEeecCCchhceEEEEEEeCCeEEEEEc
Confidence 754 44 5655 4778999999999999889999999999999999998764 456667777888887643
|
|
| >KOG0318|consensus | Back alignment and domain information |
|---|
Probab=99.50 E-value=8.6e-13 Score=109.86 Aligned_cols=140 Identities=14% Similarity=0.182 Sum_probs=113.5
Q ss_pred eeEEeecCCCceEEEEcCCCCc--ceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCc
Q psy505 16 GICCLCVNSDNCYLAYPGSNSI--GEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~d--g~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~ 85 (161)
.|.-++.++|++.|++.|...+ |.+.+|| +|..+-.|.||...|+++. .+++||+|+ |.+|+-.-- +
T Consensus 105 ~I~Di~Wd~ds~RI~avGEGrerfg~~F~~D--SG~SvGei~GhSr~ins~~~KpsRPfRi~T~sdDn~v~ffeGPPF-K 181 (603)
T KOG0318|consen 105 PIKDISWDFDSKRIAAVGEGRERFGHVFLWD--SGNSVGEITGHSRRINSVDFKPSRPFRIATGSDDNTVAFFEGPPF-K 181 (603)
T ss_pred ccccceeCCCCcEEEEEecCccceeEEEEec--CCCccceeeccceeEeeeeccCCCceEEEeccCCCeEEEeeCCCe-e
Confidence 3667888999999988875323 3455565 7888999999999999999 999999999 999985321 1
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE----ecCceEEEEECCc--EEEEEecccee
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS----FSNTILAVKLNRK--KEEEEDEEEEK 159 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~----~~~~V~~v~~~~~--~~vv~~~~~~~ 159 (161)
+...++.|. -.|.++.|+||+..+++.++|+++.|||=++|+.+.++. |.+.|+++.|+|| +++.|-.++=-
T Consensus 182 Fk~s~r~Hs--kFV~~VRysPDG~~Fat~gsDgki~iyDGktge~vg~l~~~~aHkGsIfalsWsPDs~~~~T~SaDkt~ 259 (603)
T KOG0318|consen 182 FKSSFREHS--KFVNCVRYSPDGSRFATAGSDGKIYIYDGKTGEKVGELEDSDAHKGSIFALSWSPDSTQFLTVSADKTI 259 (603)
T ss_pred eeecccccc--cceeeEEECCCCCeEEEecCCccEEEEcCCCccEEEEecCCCCccccEEEEEECCCCceEEEecCCceE
Confidence 333445554 378899999999999999999999999999999999996 6789999999998 78888777544
Q ss_pred e
Q psy505 160 K 160 (161)
Q Consensus 160 ~ 160 (161)
|
T Consensus 260 K 260 (603)
T KOG0318|consen 260 K 260 (603)
T ss_pred E
Confidence 4
|
|
| >KOG2111|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.5e-14 Score=109.61 Aligned_cols=91 Identities=27% Similarity=0.360 Sum_probs=79.2
Q ss_pred eEEEecCCceEEEEeCCcCceeeEE--eecCcceEEEEEeecCCeEEEEecC-----CCCeEEEEecCCCCeEEEEEecC
Q psy505 66 SLSVGTKSGYRLFSLNSIDTLEQIY--ENSQEDVCIVERLFSSSLVAVVSLS-----SPRKLTVCHFKRGSEICNYSFSN 138 (161)
Q Consensus 66 ~lasgs~dgiriwd~~~~~~~~~~~--~~~~~~~~v~~~~fs~~~~~~~s~~-----~d~~i~iWD~~~~~~i~~l~~~~ 138 (161)
++|+|.++|+|||++ +|+.+.. +.+.++..+++|.|..|++++|+|+ .+|.|.|||..+.+++.+++|.+
T Consensus 19 cFava~~~Gfriyn~---~P~ke~~~r~~~~~G~~~veMLfR~N~laLVGGg~~pky~pNkviIWDD~k~~~i~el~f~~ 95 (346)
T KOG2111|consen 19 CFAVATDTGFRIYNC---DPFKESASRQFIDGGFKIVEMLFRSNYLALVGGGSRPKYPPNKVIIWDDLKERCIIELSFNS 95 (346)
T ss_pred eEEEEecCceEEEec---CchhhhhhhccccCchhhhhHhhhhceEEEecCCCCCCCCCceEEEEecccCcEEEEEEecc
Confidence 899999999999999 5554422 2233457789999999999999984 47899999999999999999999
Q ss_pred ceEEEEECCcEEEEEecccee
Q psy505 139 TILAVKLNRKKEEEEDEEEEK 159 (161)
Q Consensus 139 ~V~~v~~~~~~~vv~~~~~~~ 159 (161)
+|.+|+++|+++|||++++|+
T Consensus 96 ~I~~V~l~r~riVvvl~~~I~ 116 (346)
T KOG2111|consen 96 EIKAVKLRRDRIVVVLENKIY 116 (346)
T ss_pred ceeeEEEcCCeEEEEecCeEE
Confidence 999999999999999999987
|
|
| >KOG0269|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=4.5e-14 Score=121.51 Aligned_cols=128 Identities=15% Similarity=0.209 Sum_probs=100.6
Q ss_pred CceEEEEcCCCCcceEEEEEcCC---CCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCceeeEEeec
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADN---LHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIYENS 93 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~---~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~~~~ 93 (161)
+.++||+++. .|.|-+||+.- .+.+..|..|+-.++++. +|+|||+|| ||+||++..+-. .++++.
T Consensus 99 ~~NlIAT~s~--nG~i~vWdlnk~~rnk~l~~f~EH~Rs~~~ldfh~tep~iliSGSQDg~vK~~DlR~~~S~-~t~~~n 175 (839)
T KOG0269|consen 99 YSNLIATCST--NGVISVWDLNKSIRNKLLTVFNEHERSANKLDFHSTEPNILISGSQDGTVKCWDLRSKKSK-STFRSN 175 (839)
T ss_pred hhhhheeecC--CCcEEEEecCccccchhhhHhhhhccceeeeeeccCCccEEEecCCCceEEEEeeeccccc-cccccc
Confidence 4567888776 79999999986 456678999999999998 999999999 999999986544 456665
Q ss_pred CcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCC-eEEEEE-ecCceEEEEECCcEEEEEeccc
Q psy505 94 QEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGS-EICNYS-FSNTILAVKLNRKKEEEEDEEE 157 (161)
Q Consensus 94 ~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~-~i~~l~-~~~~V~~v~~~~~~~vv~~~~~ 157 (161)
.. .+..+.|+| .+..++++++.+.|++||++.-+ +...+. |.++|+++-|+|++..+++..+
T Consensus 176 SE--SiRDV~fsp~~~~~F~s~~dsG~lqlWDlRqp~r~~~k~~AH~GpV~c~nwhPnr~~lATGGR 240 (839)
T KOG0269|consen 176 SE--SIRDVKFSPGYGNKFASIHDSGYLQLWDLRQPDRCEKKLTAHNGPVLCLNWHPNREWLATGGR 240 (839)
T ss_pred ch--hhhceeeccCCCceEEEecCCceEEEeeccCchhHHHHhhcccCceEEEeecCCCceeeecCC
Confidence 44 477788886 44566777777899999998754 333443 7899999999999777776553
|
|
| >KOG0296|consensus | Back alignment and domain information |
|---|
Probab=99.49 E-value=9.1e-13 Score=105.62 Aligned_cols=116 Identities=14% Similarity=0.203 Sum_probs=97.8
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee---------eEEEecCCc-eEEEEeC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA---------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~---------~lasgs~dg-iriwd~~ 81 (161)
.+-+.|.+.+|+.||.+||+++- +|.|+||+..++.....+. .++..+. .|+.|+.|| +-.|.+.
T Consensus 104 gHKDSVt~~~FshdgtlLATGdm--sG~v~v~~~stg~~~~~~~---~e~~dieWl~WHp~a~illAG~~DGsvWmw~ip 178 (399)
T KOG0296|consen 104 GHKDSVTCCSFSHDGTLLATGDM--SGKVLVFKVSTGGEQWKLD---QEVEDIEWLKWHPRAHILLAGSTDGSVWMWQIP 178 (399)
T ss_pred CCCCceEEEEEccCceEEEecCC--CccEEEEEcccCceEEEee---cccCceEEEEecccccEEEeecCCCcEEEEECC
Confidence 35567889999999999999877 8999999999999888886 3344444 889999999 9999998
Q ss_pred CcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
++. ..+++.||..+ +.+=.|.|+|.-++.++.|++|++||+++++++..+.
T Consensus 179 ~~~-~~kv~~Gh~~~--ct~G~f~pdGKr~~tgy~dgti~~Wn~ktg~p~~~~~ 229 (399)
T KOG0296|consen 179 SQA-LCKVMSGHNSP--CTCGEFIPDGKRILTGYDDGTIIVWNPKTGQPLHKIT 229 (399)
T ss_pred Ccc-eeeEecCCCCC--cccccccCCCceEEEEecCceEEEEecCCCceeEEec
Confidence 854 33789999754 5555699999999999999999999999999998876
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.49 E-value=1.8e-12 Score=100.97 Aligned_cols=126 Identities=9% Similarity=0.041 Sum_probs=89.5
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccC-----ccc--eeee------e-EEEecCCc-eEEEEeC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD-----SPL--AALA------S-LSVGTKSG-YRLFSLN 81 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~-----~~V--~~l~------~-lasgs~dg-iriwd~~ 81 (161)
...++++|||..+++++.. +|.|++||+.+++.+..+..+. ..+ .+++ + +++...++ +.+||++
T Consensus 159 ~~~~~~s~dg~~l~~~~~~-~~~v~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~~~~~~~~~~~i~v~d~~ 237 (300)
T TIGR03866 159 PRFAEFTADGKELWVSSEI-GGTVSVIDVATRKVIKKITFEIPGVHPEAVQPVGIKLTKDGKTAFVALGPANRVAVVDAK 237 (300)
T ss_pred ccEEEECCCCCEEEEEcCC-CCEEEEEEcCcceeeeeeeecccccccccCCccceEECCCCCEEEEEcCCCCeEEEEECC
Confidence 3457788999888666653 8999999999998877765332 111 1222 2 33333344 9999998
Q ss_pred CcCceeeEEeecCcceEEEEEeecCCeEEEEec-CCCCeEEEEecCCCCeEEEEEecCceEEEEECC
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL-SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNR 147 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~-~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~ 147 (161)
+++.......++ .+.+++|+|++..++++ +.+++|+|||+++++++.++......++++|+|
T Consensus 238 ~~~~~~~~~~~~----~~~~~~~~~~g~~l~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~ 300 (300)
T TIGR03866 238 TYEVLDYLLVGQ----RVWQLAFTPDEKYLLTTNGVSNDVSVIDVAALKVIKSIKVGRLPWGVVVRP 300 (300)
T ss_pred CCcEEEEEEeCC----CcceEEECCCCCEEEEEcCCCCeEEEEECCCCcEEEEEEcccccceeEeCC
Confidence 876543332222 25678899988776654 457899999999999999998777779999876
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.1e-13 Score=108.77 Aligned_cols=134 Identities=13% Similarity=0.202 Sum_probs=108.6
Q ss_pred CCCceeEEeecCCCce-EEEEcCCCCcceEEEEEcCCCCc---------eeeeeccCccceeee------eEEEecCCc-
Q psy505 12 PNPNGICCLCVNSDNC-YLAYPGSNSIGEVQIFDADNLHA---------KTMIPAHDSPLAALA------SLSVGTKSG- 74 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~-~la~~g~~~dg~v~iWd~~~~~~---------~~~l~~H~~~V~~l~------~lasgs~dg- 74 (161)
.++..+..+-|.+++. .+|++|. |..||||-+..... +..|..|...|+++. +||||+++|
T Consensus 11 H~~~pv~s~dfq~n~~~~laT~G~--D~~iriW~v~r~~~~~~~~~V~y~s~Ls~H~~aVN~vRf~p~gelLASg~D~g~ 88 (434)
T KOG1009|consen 11 HDHEPVYSVDFQKNSLNKLATAGG--DKDIRIWKVNRSEPGGGDMKVEYLSSLSRHTRAVNVVRFSPDGELLASGGDGGE 88 (434)
T ss_pred cCCCceEEEEeccCcccceecccC--ccceeeeeeeecCCCCCceeEEEeecccCCcceeEEEEEcCCcCeeeecCCCce
Confidence 3666788888888776 8898887 99999998876432 345789999999998 999999999
Q ss_pred eEEEEeC--------C-----c--CceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecC
Q psy505 75 YRLFSLN--------S-----I--DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSN 138 (161)
Q Consensus 75 iriwd~~--------~-----~--~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~ 138 (161)
+-+|-.. + . -...+..++|... +..++|+|+...+++++-||++++||+..|+.++.+. |..
T Consensus 89 v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~d--iydL~Ws~d~~~l~s~s~dns~~l~Dv~~G~l~~~~~dh~~ 166 (434)
T KOG1009|consen 89 VFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDD--IYDLAWSPDSNFLVSGSVDNSVRLWDVHAGQLLAILDDHEH 166 (434)
T ss_pred EEEEEecCcCCccccchhhhCccceEEEEEecccccc--hhhhhccCCCceeeeeeccceEEEEEeccceeEeecccccc
Confidence 9999865 2 0 0133455677643 7789999999999999999999999999999998875 678
Q ss_pred ceEEEEECCcE
Q psy505 139 TILAVKLNRKK 149 (161)
Q Consensus 139 ~V~~v~~~~~~ 149 (161)
-|..++|.|-.
T Consensus 167 yvqgvawDpl~ 177 (434)
T KOG1009|consen 167 YVQGVAWDPLN 177 (434)
T ss_pred ccceeecchhh
Confidence 89999998753
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=4.7e-13 Score=108.37 Aligned_cols=118 Identities=11% Similarity=0.161 Sum_probs=94.0
Q ss_pred CCCCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCC-------CceeeeeccCccceeee-------eEEEecCCc-
Q psy505 11 PPNPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNL-------HAKTMIPAHDSPLAALA-------SLSVGTKSG- 74 (161)
Q Consensus 11 ~~~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~-------~~~~~l~~H~~~V~~l~-------~lasgs~dg- 74 (161)
+.|...|.-+.++| +...||+ |+ +|.+|+||++..+ +++..|.||...|--++ .|+|++.|.
T Consensus 78 ~GHt~~vLDi~w~PfnD~vIAS-gS-eD~~v~vW~IPe~~l~~~ltepvv~L~gH~rrVg~V~wHPtA~NVLlsag~Dn~ 155 (472)
T KOG0303|consen 78 CGHTAPVLDIDWCPFNDCVIAS-GS-EDTKVMVWQIPENGLTRDLTEPVVELYGHQRRVGLVQWHPTAPNVLLSAGSDNT 155 (472)
T ss_pred cCccccccccccCccCCceeec-CC-CCceEEEEECCCcccccCcccceEEEeecceeEEEEeecccchhhHhhccCCce
Confidence 44555688888888 4455665 55 3999999998765 45778999999998888 666666676
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY 134 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l 134 (161)
|.|||+.+|+.+..+ .| +.-|.+|.|+.||..+++...|+.|+|||.++++.+.+-
T Consensus 156 v~iWnv~tgeali~l--~h--pd~i~S~sfn~dGs~l~TtckDKkvRv~dpr~~~~v~e~ 211 (472)
T KOG0303|consen 156 VSIWNVGTGEALITL--DH--PDMVYSMSFNRDGSLLCTTCKDKKVRVIDPRRGTVVSEG 211 (472)
T ss_pred EEEEeccCCceeeec--CC--CCeEEEEEeccCCceeeeecccceeEEEcCCCCcEeeec
Confidence 999999999865332 25 446889999999999999889999999999999998875
|
|
| >KOG0647|consensus | Back alignment and domain information |
|---|
Probab=99.45 E-value=1.8e-12 Score=101.94 Aligned_cols=139 Identities=12% Similarity=0.198 Sum_probs=104.9
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------eEEEecCCc-eEEEEeCCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd~~~~ 83 (161)
++..|..++++.||..+++++. |+.+++||+.++ .+..+.+|..+|+++. +|++||.|. +|.||++..
T Consensus 71 ~~~PvL~v~WsddgskVf~g~~--Dk~~k~wDL~S~-Q~~~v~~Hd~pvkt~~wv~~~~~~cl~TGSWDKTlKfWD~R~~ 147 (347)
T KOG0647|consen 71 HDGPVLDVCWSDDGSKVFSGGC--DKQAKLWDLASG-QVSQVAAHDAPVKTCHWVPGMNYQCLVTGSWDKTLKFWDTRSS 147 (347)
T ss_pred cCCCeEEEEEccCCceEEeecc--CCceEEEEccCC-CeeeeeecccceeEEEEecCCCcceeEecccccceeecccCCC
Confidence 3445889999999988887665 999999999998 4578899999999988 889999999 999998744
Q ss_pred CceeeE--------------------------------------------------------------------------
Q psy505 84 DTLEQI-------------------------------------------------------------------------- 89 (161)
Q Consensus 84 ~~~~~~-------------------------------------------------------------------------- 89 (161)
.++..+
T Consensus 148 ~pv~t~~LPeRvYa~Dv~~pm~vVata~r~i~vynL~n~~te~k~~~SpLk~Q~R~va~f~d~~~~alGsiEGrv~iq~i 227 (347)
T KOG0647|consen 148 NPVATLQLPERVYAADVLYPMAVVATAERHIAVYNLENPPTEFKRIESPLKWQTRCVACFQDKDGFALGSIEGRVAIQYI 227 (347)
T ss_pred CeeeeeeccceeeehhccCceeEEEecCCcEEEEEcCCCcchhhhhcCcccceeeEEEEEecCCceEeeeecceEEEEec
Confidence 321000
Q ss_pred ----------EeecC------c-ceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEE
Q psy505 90 ----------YENSQ------E-DVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEE 151 (161)
Q Consensus 90 ----------~~~~~------~-~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~v 151 (161)
|+-|. + -..|.+++|+|..-.+++.++|++...||-..+.-+.+.. ++.+|.+..||+++-+
T Consensus 228 d~~~~~~nFtFkCHR~~~~~~~~VYaVNsi~FhP~hgtlvTaGsDGtf~FWDkdar~kLk~s~~~~qpItcc~fn~~G~i 307 (347)
T KOG0647|consen 228 DDPNPKDNFTFKCHRSTNSVNDDVYAVNSIAFHPVHGTLVTAGSDGTFSFWDKDARTKLKTSETHPQPITCCSFNRNGSI 307 (347)
T ss_pred CCCCccCceeEEEeccCCCCCCceEEecceEeecccceEEEecCCceEEEecchhhhhhhccCcCCCccceeEecCCCCE
Confidence 00011 0 1135678899877777777789999999987766666644 7889999999998655
Q ss_pred EEe
Q psy505 152 EED 154 (161)
Q Consensus 152 v~~ 154 (161)
.+.
T Consensus 308 faY 310 (347)
T KOG0647|consen 308 FAY 310 (347)
T ss_pred EEE
Confidence 543
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=3e-12 Score=99.10 Aligned_cols=129 Identities=16% Similarity=0.205 Sum_probs=105.1
Q ss_pred EeecC-CCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEE
Q psy505 19 CLCVN-SDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIY 90 (161)
Q Consensus 19 ~~~~~-~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~ 90 (161)
-++++ ++....++.| -|.|.|-...+-+++++|+||....-|+. +||+||.|- +-|||++.=-++ +.+
T Consensus 152 e~~w~~~nd~Fflt~G---lG~v~ILsypsLkpv~si~AH~snCicI~f~p~GryfA~GsADAlvSLWD~~ELiC~-R~i 227 (313)
T KOG1407|consen 152 EISWNNSNDLFFLTNG---LGCVEILSYPSLKPVQSIKAHPSNCICIEFDPDGRYFATGSADALVSLWDVDELICE-RCI 227 (313)
T ss_pred eeeecCCCCEEEEecC---CceEEEEeccccccccccccCCcceEEEEECCCCceEeeccccceeeccChhHhhhh-eee
Confidence 33443 3444555544 49999999999999999999997666666 999999999 999999653333 455
Q ss_pred eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEE
Q psy505 91 ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEE 153 (161)
Q Consensus 91 ~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~ 153 (161)
..+.- .|..+.||.++..++|+++|.-|-|=++++|..+-++.+.++-..|+|+|.+..++
T Consensus 228 sRldw--pVRTlSFS~dg~~lASaSEDh~IDIA~vetGd~~~eI~~~~~t~tVAWHPk~~LLA 288 (313)
T KOG1407|consen 228 SRLDW--PVRTLSFSHDGRMLASASEDHFIDIAEVETGDRVWEIPCEGPTFTVAWHPKRPLLA 288 (313)
T ss_pred ccccC--ceEEEEeccCcceeeccCccceEEeEecccCCeEEEeeccCCceeEEecCCCceee
Confidence 55654 47788899999999999999999999999999999999999999999999965554
|
|
| >KOG1332|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=4.6e-13 Score=102.84 Aligned_cols=127 Identities=16% Similarity=0.146 Sum_probs=96.1
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCC---CceeeeeccCccceeee--------eEEEecCCc-eEEEEeCCcC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL---HAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~---~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd~~~~~ 84 (161)
|-....+--|+.||++++ |++|||+.+++. +.+.+|.||++||+.++ +|||+|-|| |-||.-++|+
T Consensus 14 IHda~lDyygkrlATcsS--D~tVkIf~v~~n~~s~ll~~L~Gh~GPVwqv~wahPk~G~iLAScsYDgkVIiWke~~g~ 91 (299)
T KOG1332|consen 14 IHDAQLDYYGKRLATCSS--DGTVKIFEVRNNGQSKLLAELTGHSGPVWKVAWAHPKFGTILASCSYDGKVIIWKEENGR 91 (299)
T ss_pred hhHhhhhhhcceeeeecC--CccEEEEEEcCCCCceeeeEecCCCCCeeEEeecccccCcEeeEeecCceEEEEecCCCc
Confidence 433344557899999988 999999999875 46789999999999999 999999999 9999988874
Q ss_pred ceeeEE--eecCcceEEEEEeecC--CeEEEEecCCCCeEEEEecCCC--CeEEEE--EecCceEEEEECCc
Q psy505 85 TLEQIY--ENSQEDVCIVERLFSS--SLVAVVSLSSPRKLTVCHFKRG--SEICNY--SFSNTILAVKLNRK 148 (161)
Q Consensus 85 ~~~~~~--~~~~~~~~v~~~~fs~--~~~~~~s~~~d~~i~iWD~~~~--~~i~~l--~~~~~V~~v~~~~~ 148 (161)
-.+.+ ..|.. ++.+++|.| -++.|+++++|+.|.|.+.+.. -....+ .|+-.|.+|.+.|.
T Consensus 92 -w~k~~e~~~h~~--SVNsV~wapheygl~LacasSDG~vsvl~~~~~g~w~t~ki~~aH~~GvnsVswapa 160 (299)
T KOG1332|consen 92 -WTKAYEHAAHSA--SVNSVAWAPHEYGLLLACASSDGKVSVLTYDSSGGWTTSKIVFAHEIGVNSVSWAPA 160 (299)
T ss_pred -hhhhhhhhhhcc--cceeecccccccceEEEEeeCCCcEEEEEEcCCCCccchhhhhccccccceeeecCc
Confidence 22333 34544 466666665 5678888889999999987764 222222 35678999999875
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.44 E-value=6.6e-12 Score=99.51 Aligned_cols=140 Identities=19% Similarity=0.243 Sum_probs=105.7
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
..+..|++-|.+||.+.. ||.|-|||+.|.+.-..|.||..||.|++ .|.++|.|. |++||+..|.++.++
T Consensus 26 a~~~~Fs~~G~~lAvGc~--nG~vvI~D~~T~~iar~lsaH~~pi~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~ri 103 (405)
T KOG1273|consen 26 AECCQFSRWGDYLAVGCA--NGRVVIYDFDTFRIARMLSAHVRPITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRI 103 (405)
T ss_pred cceEEeccCcceeeeecc--CCcEEEEEccccchhhhhhccccceeEEEecCCCCEeeeecCCceeEEEeccCCCceeEE
Confidence 446667889999999664 99999999999999999999999999999 889999999 999999999876544
Q ss_pred Ee--------ecC---c---------ceEEEEE-----------------------eecCCeEEEEecCCCCeEEEEecC
Q psy505 90 YE--------NSQ---E---------DVCIVER-----------------------LFSSSLVAVVSLSSPRKLTVCHFK 126 (161)
Q Consensus 90 ~~--------~~~---~---------~~~v~~~-----------------------~fs~~~~~~~s~~~d~~i~iWD~~ 126 (161)
+- .|- + ...++.+ .|.+.+.++.+|.+.+.+.++|.+
T Consensus 104 rf~spv~~~q~hp~k~n~~va~~~~~sp~vi~~s~~~h~~Lp~d~d~dln~sas~~~fdr~g~yIitGtsKGkllv~~a~ 183 (405)
T KOG1273|consen 104 RFDSPVWGAQWHPRKRNKCVATIMEESPVVIDFSDPKHSVLPKDDDGDLNSSASHGVFDRRGKYIITGTSKGKLLVYDAE 183 (405)
T ss_pred EccCccceeeeccccCCeEEEEEecCCcEEEEecCCceeeccCCCccccccccccccccCCCCEEEEecCcceEEEEecc
Confidence 31 110 0 0111111 144455566667677899999999
Q ss_pred CCCeEEEEEec--CceEEEEECCc--EEEEEeccce
Q psy505 127 RGSEICNYSFS--NTILAVKLNRK--KEEEEDEEEE 158 (161)
Q Consensus 127 ~~~~i~~l~~~--~~V~~v~~~~~--~~vv~~~~~~ 158 (161)
+-+|+..+.-. ..|..+.|++. .++.=+.|++
T Consensus 184 t~e~vas~rits~~~IK~I~~s~~g~~liiNtsDRv 219 (405)
T KOG1273|consen 184 TLECVASFRITSVQAIKQIIVSRKGRFLIINTSDRV 219 (405)
T ss_pred hheeeeeeeechheeeeEEEEeccCcEEEEecCCce
Confidence 99999888753 67888888764 6666666654
|
|
| >KOG1407|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=3e-12 Score=99.10 Aligned_cols=137 Identities=11% Similarity=0.118 Sum_probs=107.7
Q ss_pred CCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee--eeeccCccceeee-------eEEEecCCc-eEEEE
Q psy505 10 TPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT--MIPAHDSPLAALA-------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 10 ~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~--~l~~H~~~V~~l~-------~lasgs~dg-iriwd 79 (161)
+..+..-+-+++++-+|..+|+++. |+++++|++.-.+... ...+|.+.|-.++ +||+++.|. ||+||
T Consensus 16 ~~~~~~~v~Sv~wn~~g~~lasgs~--dktv~v~n~e~~r~~~~~~~~gh~~svdql~w~~~~~d~~atas~dk~ir~wd 93 (313)
T KOG1407|consen 16 LQGHVQKVHSVAWNCDGTKLASGSF--DKTVSVWNLERDRFRKELVYRGHTDSVDQLCWDPKHPDLFATASGDKTIRIWD 93 (313)
T ss_pred hhhhhhcceEEEEcccCceeeeccc--CCceEEEEecchhhhhhhcccCCCcchhhheeCCCCCcceEEecCCceEEEEE
Confidence 3345556889999999999999665 9999999998776544 4579999999888 889888888 99999
Q ss_pred eCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEE
Q psy505 80 LNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEE 152 (161)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv 152 (161)
.+++++..++-. ..+. +-..|+|++..++.+..|..|...|.++.+.+.+..+.-.+..+.||-+.-..
T Consensus 94 ~r~~k~~~~i~~-~~en---i~i~wsp~g~~~~~~~kdD~it~id~r~~~~~~~~~~~~e~ne~~w~~~nd~F 162 (313)
T KOG1407|consen 94 IRSGKCTARIET-KGEN---INITWSPDGEYIAVGNKDDRITFIDARTYKIVNEEQFKFEVNEISWNNSNDLF 162 (313)
T ss_pred eccCcEEEEeec-cCcc---eEEEEcCCCCEEEEecCcccEEEEEecccceeehhcccceeeeeeecCCCCEE
Confidence 999988754432 1122 23568998888887778889999999999988888888788888886553333
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.41 E-value=2.8e-12 Score=100.57 Aligned_cols=102 Identities=15% Similarity=0.164 Sum_probs=79.3
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee-------eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
+-+|+.||..+++.+ |++++-||+++.++...|. ||...|+++. +|++|++|| +||||++.-+.....
T Consensus 177 ~WspHHdgnqv~tt~---d~tl~~~D~RT~~~~~sI~dAHgq~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~e 253 (370)
T KOG1007|consen 177 AWSPHHDGNQVATTS---DSTLQFWDLRTMKKNNSIEDAHGQRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQE 253 (370)
T ss_pred ccCCCCccceEEEeC---CCcEEEEEccchhhhcchhhhhcceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccc
Confidence 445667999999865 8999999999998887774 8999999998 999999999 999999864422245
Q ss_pred EeecCcceEEEEEeecC--CeEEEEecCCCCeEEEEecC
Q psy505 90 YENSQEDVCIVERLFSS--SLVAVVSLSSPRKLTVCHFK 126 (161)
Q Consensus 90 ~~~~~~~~~v~~~~fs~--~~~~~~s~~~d~~i~iWD~~ 126 (161)
+.+|++ ++-++.|+| +.+ +.++++|..|.+|...
T Consensus 254 l~~HsH--WvW~VRfn~~hdqL-iLs~~SDs~V~Lsca~ 289 (370)
T KOG1007|consen 254 LPGHSH--WVWAVRFNPEHDQL-ILSGGSDSAVNLSCAS 289 (370)
T ss_pred cCCCce--EEEEEEecCccceE-EEecCCCceeEEEecc
Confidence 567776 566677776 444 4556678889999653
|
|
| >TIGR03866 PQQ_ABC_repeats PQQ-dependent catabolism-associated beta-propeller protein | Back alignment and domain information |
|---|
Probab=99.40 E-value=1.5e-11 Score=95.64 Aligned_cols=115 Identities=6% Similarity=0.059 Sum_probs=85.3
Q ss_pred EEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEE
Q psy505 28 YLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCI 99 (161)
Q Consensus 28 ~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v 99 (161)
.+++.+. ||.|++||+.+++++..+..|.. +.+++ ++++++.++ +++||..+++.... +..+.. .
T Consensus 3 ~~~s~~~--d~~v~~~d~~t~~~~~~~~~~~~-~~~l~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~-~~~~~~---~ 75 (300)
T TIGR03866 3 AYVSNEK--DNTISVIDTATLEVTRTFPVGQR-PRGITLSKDGKLLYVCASDSDTIQVIDLATGEVIGT-LPSGPD---P 75 (300)
T ss_pred EEEEecC--CCEEEEEECCCCceEEEEECCCC-CCceEECCCCCEEEEEECCCCeEEEEECCCCcEEEe-ccCCCC---c
Confidence 4555554 99999999999999999987765 55566 446777888 99999998765432 332322 3
Q ss_pred EEEeecCCeEE-EEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcE
Q psy505 100 VERLFSSSLVA-VVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 100 ~~~~fs~~~~~-~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~ 149 (161)
..++|+|++.. +++++.|+.|++||+++++++..+.....+.+++|+|++
T Consensus 76 ~~~~~~~~g~~l~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~dg 126 (300)
T TIGR03866 76 ELFALHPNGKILYIANEDDNLVTVIDIETRKVLAEIPVGVEPEGMAVSPDG 126 (300)
T ss_pred cEEEECCCCCEEEEEcCCCCeEEEEECCCCeEEeEeeCCCCcceEEECCCC
Confidence 45778887653 355556789999999998888777765667889999974
|
Members of this protein family consist of seven repeats each of the YVTN family beta-propeller repeat (see TIGR02276). Members occur invariably as part of a transport operon that is associated with PQQ-dependent catabolism of alcohols such as phenylethanol. |
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.39 E-value=1.7e-12 Score=107.95 Aligned_cols=138 Identities=17% Similarity=0.187 Sum_probs=111.9
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
..++++.+||.+...++.+ ||.|+|||+.+...+..|+||++.++|+. .|=+|+-|. +|-||++++..+.+
T Consensus 511 aCyALa~spDakvcFsccs--dGnI~vwDLhnq~~VrqfqGhtDGascIdis~dGtklWTGGlDntvRcWDlregrqlqq 588 (705)
T KOG0639|consen 511 ACYALAISPDAKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQ 588 (705)
T ss_pred hhhhhhcCCccceeeeecc--CCcEEEEEcccceeeecccCCCCCceeEEecCCCceeecCCCccceeehhhhhhhhhhh
Confidence 5679999999988777665 99999999999999999999999999998 788999999 99999987753210
Q ss_pred ------EE-------------------------------eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeE
Q psy505 89 ------IY-------------------------------ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEI 131 (161)
Q Consensus 89 ------~~-------------------------------~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i 131 (161)
+| +-|.+..-|.++-|.+-|.+++|.+.||.+-.|..--|.-|
T Consensus 589 hdF~SQIfSLg~cP~~dWlavGMens~vevlh~skp~kyqlhlheScVLSlKFa~cGkwfvStGkDnlLnawrtPyGasi 668 (705)
T KOG0639|consen 589 HDFSSQIFSLGYCPTGDWLAVGMENSNVEVLHTSKPEKYQLHLHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASI 668 (705)
T ss_pred hhhhhhheecccCCCccceeeecccCcEEEEecCCccceeecccccEEEEEEecccCceeeecCchhhhhhccCccccce
Confidence 01 01122345778899999999999999999999999889877
Q ss_pred EEEEecCceEEEEECCcEEEEEec
Q psy505 132 CNYSFSNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 132 ~~l~~~~~V~~v~~~~~~~vv~~~ 155 (161)
-+..-.+.|+++.++.|.-.+|+.
T Consensus 669 FqskE~SsVlsCDIS~ddkyIVTG 692 (705)
T KOG0639|consen 669 FQSKESSSVLSCDISFDDKYIVTG 692 (705)
T ss_pred eeccccCcceeeeeccCceEEEec
Confidence 666677999999998875555544
|
|
| >KOG1007|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=6.9e-12 Score=98.43 Aligned_cols=128 Identities=12% Similarity=0.163 Sum_probs=95.4
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc-eeeeec-----cCccceeee--------eEEEecCCceEEEEeC
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA-KTMIPA-----HDSPLAALA--------SLSVGTKSGYRLFSLN 81 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~-~~~l~~-----H~~~V~~l~--------~lasgs~dgiriwd~~ 81 (161)
.+.++-+.||+..+|+-. |..|.+|++.+++. +..+.. |+...++-+ .+++.++..++-||++
T Consensus 125 ~i~cvew~Pns~klasm~---dn~i~l~~l~ess~~vaev~ss~s~e~~~~ftsg~WspHHdgnqv~tt~d~tl~~~D~R 201 (370)
T KOG1007|consen 125 KINCVEWEPNSDKLASMD---DNNIVLWSLDESSKIVAEVLSSESAEMRHSFTSGAWSPHHDGNQVATTSDSTLQFWDLR 201 (370)
T ss_pred ceeeEEEcCCCCeeEEec---cCceEEEEcccCcchheeecccccccccceecccccCCCCccceEEEeCCCcEEEEEcc
Confidence 477888999999998744 88999999998765 444432 233333222 7777766669999999
Q ss_pred CcCceeeEEeecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecCCC-CeEEEEE-ecCceEEEEECCc
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRG-SEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~-~~i~~l~-~~~~V~~v~~~~~ 148 (161)
|-.+...+...|. -.+..|.|+||.. .+|++++|+.|||||.+.- .++.++. |...|++|+|||.
T Consensus 202 T~~~~~sI~dAHg--q~vrdlDfNpnkq~~lvt~gDdgyvriWD~R~tk~pv~el~~HsHWvW~VRfn~~ 269 (370)
T KOG1007|consen 202 TMKKNNSIEDAHG--QRVRDLDFNPNKQHILVTCGDDGYVRIWDTRKTKFPVQELPGHSHWVWAVRFNPE 269 (370)
T ss_pred chhhhcchhhhhc--ceeeeccCCCCceEEEEEcCCCccEEEEeccCCCccccccCCCceEEEEEEecCc
Confidence 8665434444453 3588999999775 5788899999999999864 4667776 6789999999996
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=2.1e-13 Score=118.46 Aligned_cols=104 Identities=13% Similarity=0.224 Sum_probs=92.1
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCce
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~ 86 (161)
...|++.+|+..|.++++++. |.-||||-+.++.|+....||++.|++++ ++|++|.|. ||+|.+..|.++
T Consensus 190 ~naVyca~fDrtg~~Iitgsd--d~lvKiwS~et~~~lAs~rGhs~ditdlavs~~n~~iaaaS~D~vIrvWrl~~~~pv 267 (1113)
T KOG0644|consen 190 RNAVYCAIFDRTGRYIITGSD--DRLVKIWSMETARCLASCRGHSGDITDLAVSSNNTMIAAASNDKVIRVWRLPDGAPV 267 (1113)
T ss_pred hhheeeeeeccccceEeecCc--cceeeeeeccchhhhccCCCCccccchhccchhhhhhhhcccCceEEEEecCCCchH
Confidence 346899999999999998544 99999999999999999999999999999 999999999 999999999887
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecC
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK 126 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~ 126 (161)
.+++||+++ |.+++|+|-- |.++|+++++||.+
T Consensus 268 -svLrghtga--vtaiafsP~~----sss~dgt~~~wd~r 300 (1113)
T KOG0644|consen 268 -SVLRGHTGA--VTAIAFSPRA----SSSDDGTCRIWDAR 300 (1113)
T ss_pred -HHHhccccc--eeeeccCccc----cCCCCCceEecccc
Confidence 678899875 6788899865 56689999999987
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.9e-12 Score=107.45 Aligned_cols=133 Identities=16% Similarity=0.226 Sum_probs=102.6
Q ss_pred eecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----------------------------------
Q psy505 20 LCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA---------------------------------- 65 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~---------------------------------- 65 (161)
++......|++++|. .|.|+|||++.+.+...+.+|.+-|.++.
T Consensus 85 v~~~s~S~y~~sgG~--~~~Vkiwdl~~kl~hr~lkdh~stvt~v~YN~~DeyiAsvs~gGdiiih~~~t~~~tt~f~~~ 162 (673)
T KOG4378|consen 85 VACASQSLYEISGGQ--SGCVKIWDLRAKLIHRFLKDHQSTVTYVDYNNTDEYIASVSDGGDIIIHGTKTKQKTTTFTID 162 (673)
T ss_pred HhhhhcceeeeccCc--CceeeehhhHHHHHhhhccCCcceeEEEEecCCcceeEEeccCCcEEEEecccCccccceecC
Confidence 333445688888775 79999999997778888999999998765
Q ss_pred ----------------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCC
Q psy505 66 ----------------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKR 127 (161)
Q Consensus 66 ----------------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~ 127 (161)
+|.++|++| |-+||+....+.....+.|. ..+..++|+| |-..+|+-+-|..|.+||...
T Consensus 163 sgqsvRll~ys~skr~lL~~asd~G~VtlwDv~g~sp~~~~~~~Hs--AP~~gicfspsne~l~vsVG~Dkki~~yD~~s 240 (673)
T KOG4378|consen 163 SGQSVRLLRYSPSKRFLLSIASDKGAVTLWDVQGMSPIFHASEAHS--APCRGICFSPSNEALLVSVGYDKKINIYDIRS 240 (673)
T ss_pred CCCeEEEeecccccceeeEeeccCCeEEEEeccCCCcccchhhhcc--CCcCcceecCCccceEEEecccceEEEeeccc
Confidence 667778888 88888865554433334454 3466778987 555566766789999999998
Q ss_pred CCeEEEEEecCceEEEEECCcEEEEEecc
Q psy505 128 GSEICNYSFSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 128 ~~~i~~l~~~~~V~~v~~~~~~~vv~~~~ 156 (161)
++....+.+..+-.+|+|++++-++|..+
T Consensus 241 ~~s~~~l~y~~Plstvaf~~~G~~L~aG~ 269 (673)
T KOG4378|consen 241 QASTDRLTYSHPLSTVAFSECGTYLCAGN 269 (673)
T ss_pred ccccceeeecCCcceeeecCCceEEEeec
Confidence 88888899999999999999988887655
|
|
| >KOG0639|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=1.6e-12 Score=108.04 Aligned_cols=133 Identities=12% Similarity=0.135 Sum_probs=98.7
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCce--eeeeccCccceeee-------eEEEecCCceEEEEeCCcCceeeE
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAK--TMIPAHDSPLAALA-------SLSVGTKSGYRLFSLNSIDTLEQI 89 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~--~~l~~H~~~V~~l~-------~lasgs~dgiriwd~~~~~~~~~~ 89 (161)
+.-..|||..|+++|. -.++-|||+.+-.+. ..+....-....++ +|+++++..|+|||+.+...+ +-
T Consensus 470 SckL~pdgrtLivGGe--astlsiWDLAapTprikaeltssapaCyALa~spDakvcFsccsdGnI~vwDLhnq~~V-rq 546 (705)
T KOG0639|consen 470 SCKLLPDGRTLIVGGE--ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDAKVCFSCCSDGNIAVWDLHNQTLV-RQ 546 (705)
T ss_pred eeEecCCCceEEeccc--cceeeeeeccCCCcchhhhcCCcchhhhhhhcCCccceeeeeccCCcEEEEEcccceee-ec
Confidence 3333679999999886 589999999875432 22332222233333 666665444999999986544 67
Q ss_pred EeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEecc
Q psy505 90 YENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 90 ~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
++||.+.+. ++..+++|.-+-+|+-||+||-||+++++.+.+..|.++|.++-..|+ .++|=.++
T Consensus 547 fqGhtDGas--cIdis~dGtklWTGGlDntvRcWDlregrqlqqhdF~SQIfSLg~cP~~dWlavGMen 613 (705)
T KOG0639|consen 547 FQGHTDGAS--CIDISKDGTKLWTGGLDNTVRCWDLREGRQLQQHDFSSQIFSLGYCPTGDWLAVGMEN 613 (705)
T ss_pred ccCCCCCce--eEEecCCCceeecCCCccceeehhhhhhhhhhhhhhhhhheecccCCCccceeeeccc
Confidence 789987644 556888898899999999999999999999999999999999999886 56655444
|
|
| >KOG0288|consensus | Back alignment and domain information |
|---|
Probab=99.36 E-value=2e-11 Score=99.28 Aligned_cols=119 Identities=13% Similarity=0.160 Sum_probs=76.9
Q ss_pred cceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecC--cceEEEEEeecCC
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQ--EDVCIVERLFSSS 107 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~--~~~~v~~~~fs~~ 107 (161)
|+.||.||.++..+.....+|. .|++|. -|.+++.|. +++.|+++-+ +...++... -+.-...+.|||+
T Consensus 321 DkkvRfwD~Rs~~~~~sv~~gg-~vtSl~ls~~g~~lLsssRDdtl~viDlRt~e-I~~~~sA~g~k~asDwtrvvfSpd 398 (459)
T KOG0288|consen 321 DKKVRFWDIRSADKTRSVPLGG-RVTSLDLSMDGLELLSSSRDDTLKVIDLRTKE-IRQTFSAEGFKCASDWTRVVFSPD 398 (459)
T ss_pred ccceEEEeccCCceeeEeecCc-ceeeEeeccCCeEEeeecCCCceeeeeccccc-EEEEeeccccccccccceeEECCC
Confidence 6666666666666666666554 566665 233334443 6666666533 323333211 0011345679999
Q ss_pred eEEEEecCCCCeEEEEecCCCCeEEEEEe-c--CceEEEEECCc--EEEEEeccc
Q psy505 108 LVAVVSLSSPRKLTVCHFKRGSEICNYSF-S--NTILAVKLNRK--KEEEEDEEE 157 (161)
Q Consensus 108 ~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~--~~V~~v~~~~~--~~vv~~~~~ 157 (161)
+.+++.|+.|+.|+||++.++++...++. . ..|.++.|+|. +++-+.+++
T Consensus 399 ~~YvaAGS~dgsv~iW~v~tgKlE~~l~~s~s~~aI~s~~W~~sG~~Llsadk~~ 453 (459)
T KOG0288|consen 399 GSYVAAGSADGSVYIWSVFTGKLEKVLSLSTSNAAITSLSWNPSGSGLLSADKQK 453 (459)
T ss_pred CceeeeccCCCcEEEEEccCceEEEEeccCCCCcceEEEEEcCCCchhhcccCCc
Confidence 99999999999999999999999888763 2 36999999996 555555443
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=3.6e-12 Score=108.52 Aligned_cols=112 Identities=14% Similarity=0.186 Sum_probs=94.4
Q ss_pred CCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCC-------CceeeeeccCccceeee-------eEEEecCCc-eE
Q psy505 13 NPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNL-------HAKTMIPAHDSPLAALA-------SLSVGTKSG-YR 76 (161)
Q Consensus 13 ~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~-------~~~~~l~~H~~~V~~l~-------~lasgs~dg-ir 76 (161)
|-..|..|.++| |...||.++. ||.|+||.+..+ .+...|.+|...|.++. .||++|.|- |+
T Consensus 626 Ngt~vtDl~WdPFD~~rLAVa~d--dg~i~lWr~~a~gl~e~~~tPe~~lt~h~eKI~slRfHPLAadvLa~asyd~Ti~ 703 (1012)
T KOG1445|consen 626 NGTLVTDLHWDPFDDERLAVATD--DGQINLWRLTANGLPENEMTPEKILTIHGEKITSLRFHPLAADVLAVASYDSTIE 703 (1012)
T ss_pred cCceeeecccCCCChHHeeeccc--CceEEEEEeccCCCCcccCCcceeeecccceEEEEEecchhhhHhhhhhccceee
Confidence 334466888888 7788999886 999999998865 45678999999999998 899999999 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~ 129 (161)
|||++++... ..+.||.+ .|..++|||+|..+++-..|++|++|+.+.+.
T Consensus 704 lWDl~~~~~~-~~l~gHtd--qIf~~AWSpdGr~~AtVcKDg~~rVy~Prs~e 753 (1012)
T KOG1445|consen 704 LWDLANAKLY-SRLVGHTD--QIFGIAWSPDGRRIATVCKDGTLRVYEPRSRE 753 (1012)
T ss_pred eeehhhhhhh-heeccCcC--ceeEEEECCCCcceeeeecCceEEEeCCCCCC
Confidence 9999997643 56688976 48899999999988887789999999998775
|
|
| >KOG0300|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.5e-11 Score=97.78 Aligned_cols=136 Identities=11% Similarity=0.185 Sum_probs=99.6
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------------------------
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------------------------- 65 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------------------------- 65 (161)
.+.+||--++......++.+++. |-+.+||.+++|+|+.+++||.+.|+++.
T Consensus 146 GHkDGiW~Vaa~~tqpi~gtASA--DhTA~iWs~Esg~CL~~Y~GH~GSVNsikfh~s~~L~lTaSGD~taHIW~~av~~ 223 (481)
T KOG0300|consen 146 GHKDGIWHVAADSTQPICGTASA--DHTARIWSLESGACLATYTGHTGSVNSIKFHNSGLLLLTASGDETAHIWKAAVNW 223 (481)
T ss_pred ccccceeeehhhcCCcceeeccc--ccceeEEeeccccceeeecccccceeeEEeccccceEEEccCCcchHHHHHhhcC
Confidence 46678888887655556665444 99999999999999999999999999877
Q ss_pred --------------------------------------------------------------eEEEecCCc-eEEEEeCC
Q psy505 66 --------------------------------------------------------------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 66 --------------------------------------------------------------~lasgs~dg-iriwd~~~ 82 (161)
.++++|.|. ..+||+++
T Consensus 224 ~vP~~~a~~~hSsEeE~e~sDe~~~d~d~~~~sD~~tiRvPl~~ltgH~~vV~a~dWL~gg~Q~vTaSWDRTAnlwDVEt 303 (481)
T KOG0300|consen 224 EVPSNNAPSDHSSEEEEEHSDEHNRDTDSSEKSDGHTIRVPLMRLTGHRAVVSACDWLAGGQQMVTASWDRTANLWDVET 303 (481)
T ss_pred cCCCCCCCCCCCchhhhhcccccccccccccccCCceeeeeeeeeeccccceEehhhhcCcceeeeeeccccceeeeecc
Confidence 455666666 67777777
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEE---EE-ecCceEEEEECCcEEEEEe
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICN---YS-FSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~---l~-~~~~V~~v~~~~~~~vv~~ 154 (161)
|+.+ ..+.||.....- ..-.|+...++..+.|.+.++||++. .|.. |. |.+.|.++.|+.+.-+|-.
T Consensus 304 ge~v-~~LtGHd~ELtH--cstHptQrLVvTsSrDtTFRLWDFRe--aI~sV~VFQGHtdtVTS~vF~~dd~vVSg 374 (481)
T KOG0300|consen 304 GEVV-NILTGHDSELTH--CSTHPTQRLVVTSSRDTTFRLWDFRE--AIQSVAVFQGHTDTVTSVVFNTDDRVVSG 374 (481)
T ss_pred Ccee-ccccCcchhccc--cccCCcceEEEEeccCceeEeccchh--hcceeeeecccccceeEEEEecCCceeec
Confidence 7655 566777643222 23457777777778899999999984 3433 33 5689999999997555543
|
|
| >KOG1036|consensus | Back alignment and domain information |
|---|
Probab=99.35 E-value=1.7e-11 Score=96.49 Aligned_cols=141 Identities=10% Similarity=0.091 Sum_probs=105.2
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCc
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~ 85 (161)
..|..++.++...+....++++|. |++|++||.++..++.++..-+ .|.++. .|+.|+.|. +.+||+++-+.
T Consensus 91 gth~~~i~ci~~~~~~~~vIsgsW--D~~ik~wD~R~~~~~~~~d~~k-kVy~~~v~g~~LvVg~~~r~v~iyDLRn~~~ 167 (323)
T KOG1036|consen 91 GTHDEGIRCIEYSYEVGCVISGSW--DKTIKFWDPRNKVVVGTFDQGK-KVYCMDVSGNRLVVGTSDRKVLIYDLRNLDE 167 (323)
T ss_pred ccCCCceEEEEeeccCCeEEEccc--CccEEEEeccccccccccccCc-eEEEEeccCCEEEEeecCceEEEEEcccccc
Confidence 346678999998876667777666 9999999999866766676543 788888 788887777 99999874321
Q ss_pred ee--------------eEE---------------------------------eecC-------cceEEEEEeecCCeEEE
Q psy505 86 LE--------------QIY---------------------------------ENSQ-------EDVCIVERLFSSSLVAV 111 (161)
Q Consensus 86 ~~--------------~~~---------------------------------~~~~-------~~~~v~~~~fs~~~~~~ 111 (161)
.. .++ +-|. --..|.+++|+|-...+
T Consensus 168 ~~q~reS~lkyqtR~v~~~pn~eGy~~sSieGRVavE~~d~s~~~~skkyaFkCHr~~~~~~~~~yPVNai~Fhp~~~tf 247 (323)
T KOG1036|consen 168 PFQRRESSLKYQTRCVALVPNGEGYVVSSIEGRVAVEYFDDSEEAQSKKYAFKCHRLSEKDTEIIYPVNAIAFHPIHGTF 247 (323)
T ss_pred hhhhccccceeEEEEEEEecCCCceEEEeecceEEEEccCCchHHhhhceeEEeeecccCCceEEEEeceeEeccccceE
Confidence 00 000 0010 01357789999988889
Q ss_pred EecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEe
Q psy505 112 VSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 112 ~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~ 154 (161)
++|++|+-|-+||....+.++++. ++..|-++.|+.++..++.
T Consensus 248 aTgGsDG~V~~Wd~~~rKrl~q~~~~~~SI~slsfs~dG~~LAi 291 (323)
T KOG1036|consen 248 ATGGSDGIVNIWDLFNRKRLKQLAKYETSISSLSFSMDGSLLAI 291 (323)
T ss_pred EecCCCceEEEccCcchhhhhhccCCCCceEEEEeccCCCeEEE
Confidence 999999999999999999998886 6788999999998554443
|
|
| >KOG0641|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=1.1e-10 Score=89.40 Aligned_cols=133 Identities=14% Similarity=0.144 Sum_probs=103.5
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc-----eeeeeccCccceeee----------eEEEecCCc--eEE
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA-----KTMIPAHDSPLAALA----------SLSVGTKSG--YRL 77 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~-----~~~l~~H~~~V~~l~----------~lasgs~dg--iri 77 (161)
..+++.+++|+|..+|+++. |.+||+.-++...| ..+|.-|.+.|++++ +||+++..- |.+
T Consensus 90 gsiyc~~ws~~geliatgsn--dk~ik~l~fn~dt~~~~g~dle~nmhdgtirdl~fld~~~s~~~il~s~gagdc~iy~ 167 (350)
T KOG0641|consen 90 GSIYCTAWSPCGELIATGSN--DKTIKVLPFNADTCNATGHDLEFNMHDGTIRDLAFLDDPESGGAILASAGAGDCKIYI 167 (350)
T ss_pred ccEEEEEecCccCeEEecCC--CceEEEEecccccccccCcceeeeecCCceeeeEEecCCCcCceEEEecCCCcceEEE
Confidence 35889999999999998553 99999976554432 346788999999998 778776544 666
Q ss_pred EEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--e------cCceEEEEECCcE
Q psy505 78 FSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--F------SNTILAVKLNRKK 149 (161)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--~------~~~V~~v~~~~~~ 149 (161)
=|..+|+.+ .-+.||++. |. ..|+=++..++||+.|++|+.||++-..|+..+. | ++.|.+|+..|.+
T Consensus 168 tdc~~g~~~-~a~sghtgh--il-alyswn~~m~~sgsqdktirfwdlrv~~~v~~l~~~~~~~glessavaav~vdpsg 243 (350)
T KOG0641|consen 168 TDCGRGQGF-HALSGHTGH--IL-ALYSWNGAMFASGSQDKTIRFWDLRVNSCVNTLDNDFHDGGLESSAVAAVAVDPSG 243 (350)
T ss_pred eecCCCCcc-eeecCCccc--EE-EEEEecCcEEEccCCCceEEEEeeeccceeeeccCcccCCCcccceeEEEEECCCc
Confidence 678888877 567888753 33 3577788889999999999999999999998874 3 2579999999984
Q ss_pred EEEE
Q psy505 150 EEEE 153 (161)
Q Consensus 150 ~vv~ 153 (161)
-.++
T Consensus 244 rll~ 247 (350)
T KOG0641|consen 244 RLLA 247 (350)
T ss_pred ceee
Confidence 4444
|
|
| >KOG0649|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=7.8e-11 Score=90.80 Aligned_cols=80 Identities=11% Similarity=0.079 Sum_probs=59.4
Q ss_pred EecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEee-cCCeEEEEecCCCCeEEEEecCCCCeEEEEE-e---------
Q psy505 69 VGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLF-SSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-F--------- 136 (161)
Q Consensus 69 sgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~f-s~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~--------- 136 (161)
.++-|+ +.-||+++|+ +.+.++||++ ++.++.- +.++. +.||++|+++||||.++++++..+. +
T Consensus 131 ~AgGD~~~y~~dlE~G~-i~r~~rGHtD--YvH~vv~R~~~~q-ilsG~EDGtvRvWd~kt~k~v~~ie~yk~~~~lRp~ 206 (325)
T KOG0649|consen 131 FAGGDGVIYQVDLEDGR-IQREYRGHTD--YVHSVVGRNANGQ-ILSGAEDGTVRVWDTKTQKHVSMIEPYKNPNLLRPD 206 (325)
T ss_pred EecCCeEEEEEEecCCE-EEEEEcCCcc--eeeeeeecccCcc-eeecCCCccEEEEeccccceeEEeccccChhhcCcc
Confidence 344667 8888998886 6688899974 5666665 44554 5567799999999999999988774 1
Q ss_pred -cCceEEEEECCcEEEE
Q psy505 137 -SNTILAVKLNRKKEEE 152 (161)
Q Consensus 137 -~~~V~~v~~~~~~~vv 152 (161)
...|-+++-|-|.++.
T Consensus 207 ~g~wigala~~edWlvC 223 (325)
T KOG0649|consen 207 WGKWIGALAVNEDWLVC 223 (325)
T ss_pred cCceeEEEeccCceEEe
Confidence 1357888888887764
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.6e-12 Score=106.70 Aligned_cols=115 Identities=16% Similarity=0.185 Sum_probs=91.2
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC--------CCceeeeeccCccceeee------eEEEecCCc-eE
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN--------LHAKTMIPAHDSPLAALA------SLSVGTKSG-YR 76 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~--------~~~~~~l~~H~~~V~~l~------~lasgs~dg-ir 76 (161)
++.+++.+++++|-...+++++. ||++++|+++. .+++.+|+||++||-|++ .+.+|+-|| ||
T Consensus 292 s~~d~ir~l~~~~sep~lit~se--d~~lk~WnLqk~~~s~~~~~epi~tfraH~gPVl~v~v~~n~~~~ysgg~Dg~I~ 369 (577)
T KOG0642|consen 292 SHDDCIRALAFHPSEPVLITASE--DGTLKLWNLQKAKKSAEKDVEPILTFRAHEGPVLCVVVPSNGEHCYSGGIDGTIR 369 (577)
T ss_pred cchhhhhhhhcCCCCCeEEEecc--ccchhhhhhcccCCccccceeeeEEEecccCceEEEEecCCceEEEeeccCceee
Confidence 46678999999998888888765 99999999932 257899999999999999 888999999 99
Q ss_pred EEEeC------CcC---ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCe
Q psy505 77 LFSLN------SID---TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE 130 (161)
Q Consensus 77 iwd~~------~~~---~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~ 130 (161)
.|++. ... .+...+.||.+. +..++||+.-.-+++++.|+|+++|+......
T Consensus 370 ~w~~p~n~dp~ds~dp~vl~~~l~Ghtda--vw~l~~s~~~~~Llscs~DgTvr~w~~~~~~~ 430 (577)
T KOG0642|consen 370 CWNLPPNQDPDDSYDPSVLSGTLLGHTDA--VWLLALSSTKDRLLSCSSDGTVRLWEPTEESP 430 (577)
T ss_pred eeccCCCCCcccccCcchhccceeccccc--eeeeeecccccceeeecCCceEEeeccCCcCc
Confidence 99542 111 244567889875 45777887555588888999999999887665
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.1e-11 Score=93.47 Aligned_cols=136 Identities=15% Similarity=0.258 Sum_probs=98.9
Q ss_pred CCCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCC--------c--eee-----eeccCccceeee-------eEE
Q psy505 12 PNPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLH--------A--KTM-----IPAHDSPLAALA-------SLS 68 (161)
Q Consensus 12 ~~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~--------~--~~~-----l~~H~~~V~~l~-------~la 68 (161)
+|.-+|.++.+++ .|.++.++|. ||.|.+||++... + +.. =.+|+-.|.++- +|.
T Consensus 41 ~HgGsvNsL~id~tegrymlSGga--dgsi~v~Dl~n~t~~e~s~li~k~~c~v~~~h~~~Hky~iss~~WyP~DtGmFt 118 (397)
T KOG4283|consen 41 PHGGSVNSLQIDLTEGRYMLSGGA--DGSIAVFDLQNATDYEASGLIAKHKCIVAKQHENGHKYAISSAIWYPIDTGMFT 118 (397)
T ss_pred cCCCccceeeeccccceEEeecCC--CccEEEEEeccccchhhccceeheeeeccccCCccceeeeeeeEEeeecCceee
Confidence 3556788999987 6889998776 9999999998653 0 111 136777777777 999
Q ss_pred EecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecC---CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEE
Q psy505 69 VGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSS---SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAV 143 (161)
Q Consensus 69 sgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~---~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v 143 (161)
++|-|. +|+||+.|-+.. -.|.-.. .|.+.+.|| .--.++.|..|-.|++.|++.|.+-..++ |++.|++|
T Consensus 119 ssSFDhtlKVWDtnTlQ~a-~~F~me~---~VYshamSp~a~sHcLiA~gtr~~~VrLCDi~SGs~sH~LsGHr~~vlaV 194 (397)
T KOG4283|consen 119 SSSFDHTLKVWDTNTLQEA-VDFKMEG---KVYSHAMSPMAMSHCLIAAGTRDVQVRLCDIASGSFSHTLSGHRDGVLAV 194 (397)
T ss_pred cccccceEEEeecccceee-EEeecCc---eeehhhcChhhhcceEEEEecCCCcEEEEeccCCcceeeeccccCceEEE
Confidence 999999 999999775422 2332221 355666665 23345556667789999999999999987 78999999
Q ss_pred EECCc-EEEEE
Q psy505 144 KLNRK-KEEEE 153 (161)
Q Consensus 144 ~~~~~-~~vv~ 153 (161)
.|+|. ..|++
T Consensus 195 ~Wsp~~e~vLa 205 (397)
T KOG4283|consen 195 EWSPSSEWVLA 205 (397)
T ss_pred EeccCceeEEE
Confidence 99997 33443
|
|
| >KOG0294|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=6.5e-11 Score=93.72 Aligned_cols=127 Identities=14% Similarity=0.139 Sum_probs=87.5
Q ss_pred CceeEEeecCCCce--EEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------------------------
Q psy505 14 PNGICCLCVNSDNC--YLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------------------------- 65 (161)
Q Consensus 14 ~~~v~~~~~~~d~~--~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------------------------- 65 (161)
...+.++.|.|+.. +|.+++. ||.|.+|+..+-.++.+|++|.+.|+.++
T Consensus 83 agsitaL~F~~~~S~shLlS~sd--DG~i~iw~~~~W~~~~slK~H~~~Vt~lsiHPS~KLALsVg~D~~lr~WNLV~Gr 160 (362)
T KOG0294|consen 83 AGSITALKFYPPLSKSHLLSGSD--DGHIIIWRVGSWELLKSLKAHKGQVTDLSIHPSGKLALSVGGDQVLRTWNLVRGR 160 (362)
T ss_pred ccceEEEEecCCcchhheeeecC--CCcEEEEEcCCeEEeeeecccccccceeEecCCCceEEEEcCCceeeeehhhcCc
Confidence 44588888877654 7777555 99999999999999999999999999777
Q ss_pred ------------------------------------------------------------eEEEecCCc-eEEEEeCCcC
Q psy505 66 ------------------------------------------------------------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 66 ------------------------------------------------------------~lasgs~dg-iriwd~~~~~ 84 (161)
.|++|.+|+ |++||..++.
T Consensus 161 ~a~v~~L~~~at~v~w~~~Gd~F~v~~~~~i~i~q~d~A~v~~~i~~~~r~l~~~~l~~~~L~vG~d~~~i~~~D~ds~~ 240 (362)
T KOG0294|consen 161 VAFVLNLKNKATLVSWSPQGDHFVVSGRNKIDIYQLDNASVFREIENPKRILCATFLDGSELLVGGDNEWISLKDTDSDT 240 (362)
T ss_pred cceeeccCCcceeeEEcCCCCEEEEEeccEEEEEecccHhHhhhhhccccceeeeecCCceEEEecCCceEEEeccCCCc
Confidence 344444444 5555544433
Q ss_pred ceeeEEeecCcceEEEEEee--cCCeEEEEecCCCCeEEEEecCCC-----CeEEEEEecCceEEEEE
Q psy505 85 TLEQIYENSQEDVCIVERLF--SSSLVAVVSLSSPRKLTVCHFKRG-----SEICNYSFSNTILAVKL 145 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~f--s~~~~~~~s~~~d~~i~iWD~~~~-----~~i~~l~~~~~V~~v~~ 145 (161)
++ ..+.+|.. .|-.+.+ .|...++++.++|+.|+|||.... +.++++....+..+++.
T Consensus 241 ~~-~~~~AH~~--RVK~i~~~~~~~~~~lvTaSSDG~I~vWd~~~~~k~~~~~l~e~n~~~RltCl~~ 305 (362)
T KOG0294|consen 241 PL-TEFLAHEN--RVKDIASYTNPEHEYLVTASSDGFIKVWDIDMETKKRPTLLAELNTNVRLTCLRV 305 (362)
T ss_pred cc-eeeecchh--heeeeEEEecCCceEEEEeccCceEEEEEccccccCCcceeEEeecCCccceeee
Confidence 33 23334432 3434442 466678888889999999999876 56666666666665554
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.7e-10 Score=98.44 Aligned_cols=145 Identities=16% Similarity=0.214 Sum_probs=112.3
Q ss_pred EEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEE
Q psy505 5 HTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRL 77 (161)
Q Consensus 5 ~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iri 77 (161)
.+| .+ +....+.++++.+. ..|.++|. +|+|-=||+.+++.++.++.-.++||+++ .++.|++|| +..
T Consensus 62 ~vi-~g-~~drsIE~L~W~e~-~RLFS~g~--sg~i~EwDl~~lk~~~~~d~~gg~IWsiai~p~~~~l~IgcddGvl~~ 136 (691)
T KOG2048|consen 62 PVI-HG-PEDRSIESLAWAEG-GRLFSSGL--SGSITEWDLHTLKQKYNIDSNGGAIWSIAINPENTILAIGCDDGVLYD 136 (691)
T ss_pred EEE-ec-CCCCceeeEEEccC-CeEEeecC--CceEEEEecccCceeEEecCCCcceeEEEeCCccceEEeecCCceEEE
Confidence 445 44 33456889999854 56777676 89999999999999999999999999999 899999999 888
Q ss_pred EEeCCcCceeeEEee-cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE-----Eec----CceEEEEECC
Q psy505 78 FSLNSIDTLEQIYEN-SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY-----SFS----NTILAVKLNR 147 (161)
Q Consensus 78 wd~~~~~~~~~~~~~-~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l-----~~~----~~V~~v~~~~ 147 (161)
++...+. + +..+- ..-...+.++.|+|++.-+++|+.|+.|++||+++++.+... ... --||+|.|=+
T Consensus 137 ~s~~p~~-I-~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~Dg~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lr 214 (691)
T KOG2048|consen 137 FSIGPDK-I-TYKRSLMRQKSRVLSLSWNPTGTKIAGGSIDGVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLR 214 (691)
T ss_pred EecCCce-E-EEEeecccccceEEEEEecCCccEEEecccCceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEee
Confidence 8887754 3 12221 112347899999999999999999999999999999877622 111 2599999988
Q ss_pred cEEEEEecc
Q psy505 148 KKEEEEDEE 156 (161)
Q Consensus 148 ~~~vv~~~~ 156 (161)
+..+++.+.
T Consensus 215 d~tI~sgDS 223 (691)
T KOG2048|consen 215 DSTIASGDS 223 (691)
T ss_pred cCcEEEecC
Confidence 877776654
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=5.2e-11 Score=104.37 Aligned_cols=135 Identities=13% Similarity=0.107 Sum_probs=105.6
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
.+..++++.+|.++|.+|+ |-.|++-++........+++|+.+|.+|. +||+.+-|| +++||+.++... .
T Consensus 98 p~r~~~v~g~g~~iaagsd--D~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~~fLAvss~dG~v~iw~~~~~~~~-~ 174 (933)
T KOG1274|consen 98 PIRDLAVSGSGKMIAAGSD--DTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKGNFLAVSSCDGKVQIWDLQDGILS-K 174 (933)
T ss_pred cceEEEEecCCcEEEeecC--ceeEEEEeccccchheeecccCCceeeeeEcCCCCEEEEEecCceEEEEEcccchhh-h
Confidence 3456777889999998776 99999999999999999999999999999 999999999 999999987643 3
Q ss_pred EEeecC------cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--e-cCceEEEEECCcEEEEE
Q psy505 89 IYENSQ------EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--F-SNTILAVKLNRKKEEEE 153 (161)
Q Consensus 89 ~~~~~~------~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--~-~~~V~~v~~~~~~~vv~ 153 (161)
++.+-. ..-.+..++|+|++..++--..|++|++|+.........|. + .+.+..++|+|.+-.++
T Consensus 175 tl~~v~k~n~~~~s~i~~~~aW~Pk~g~la~~~~d~~Vkvy~r~~we~~f~Lr~~~~ss~~~~~~wsPnG~YiA 248 (933)
T KOG1274|consen 175 TLTGVDKDNEFILSRICTRLAWHPKGGTLAVPPVDNTVKVYSRKGWELQFKLRDKLSSSKFSDLQWSPNGKYIA 248 (933)
T ss_pred hcccCCccccccccceeeeeeecCCCCeEEeeccCCeEEEEccCCceeheeecccccccceEEEEEcCCCcEEe
Confidence 333311 12235678999985444433468999999999998877775 3 35588899999855544
|
|
| >KOG0299|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=9.7e-12 Score=102.10 Aligned_cols=139 Identities=12% Similarity=0.227 Sum_probs=108.5
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCce-eee-----------------eccCccceeee------eE
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAK-TMI-----------------PAHDSPLAALA------SL 67 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~-~~l-----------------~~H~~~V~~l~------~l 67 (161)
.|...+++++.+||..+..+++. ||+|.=|++.+|+.. +.+ ++|...+-+++ ||
T Consensus 140 ~H~~s~~~vals~d~~~~fsask--~g~i~kw~v~tgk~~~~i~~~~ev~k~~~~~~k~~r~~h~keil~~avS~Dgkyl 217 (479)
T KOG0299|consen 140 KHQLSVTSVALSPDDKRVFSASK--DGTILKWDVLTGKKDRYIIERDEVLKSHGNPLKESRKGHVKEILTLAVSSDGKYL 217 (479)
T ss_pred cccCcceEEEeeccccceeecCC--CcceeeeehhcCcccccccccchhhhhccCCCCcccccccceeEEEEEcCCCcEE
Confidence 45566889999999999988775 999999999998743 111 27888888888 99
Q ss_pred EEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE-EecCceEEEEE
Q psy505 68 SVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY-SFSNTILAVKL 145 (161)
Q Consensus 68 asgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l-~~~~~V~~v~~ 145 (161)
|+|..|. |.|||.++.+.. +.+.+|.+. |.+++|...---+.|++.|++|++|++.....+.++ .|++.|.++..
T Consensus 218 atgg~d~~v~Iw~~~t~ehv-~~~~ghr~~--V~~L~fr~gt~~lys~s~Drsvkvw~~~~~s~vetlyGHqd~v~~Ida 294 (479)
T KOG0299|consen 218 ATGGRDRHVQIWDCDTLEHV-KVFKGHRGA--VSSLAFRKGTSELYSASADRSVKVWSIDQLSYVETLYGHQDGVLGIDA 294 (479)
T ss_pred EecCCCceEEEecCcccchh-hcccccccc--eeeeeeecCccceeeeecCCceEEEehhHhHHHHHHhCCccceeeech
Confidence 9999999 999999998876 578899875 566667643333444557899999999988777664 58899999865
Q ss_pred -CCcEEEEEec
Q psy505 146 -NRKKEEEEDE 155 (161)
Q Consensus 146 -~~~~~vv~~~ 155 (161)
++.+.+.|..
T Consensus 295 L~reR~vtVGg 305 (479)
T KOG0299|consen 295 LSRERCVTVGG 305 (479)
T ss_pred hcccceEEecc
Confidence 7778888873
|
|
| >KOG4283|consensus | Back alignment and domain information |
|---|
Probab=99.32 E-value=1.7e-11 Score=96.60 Aligned_cols=111 Identities=14% Similarity=0.232 Sum_probs=85.4
Q ss_pred eEEeecCC--CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCc-Cc
Q psy505 17 ICCLCVNS--DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSI-DT 85 (161)
Q Consensus 17 v~~~~~~~--d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~-~~ 85 (161)
|++=+.+| -...|++.|-. |-.||+=|+.+|.+-++|+||.+.|-+|. .||+||.|| ||+||++.. .+
T Consensus 146 VYshamSp~a~sHcLiA~gtr-~~~VrLCDi~SGs~sH~LsGHr~~vlaV~Wsp~~e~vLatgsaDg~irlWDiRrasgc 224 (397)
T KOG4283|consen 146 VYSHAMSPMAMSHCLIAAGTR-DVQVRLCDIASGSFSHTLSGHRDGVLAVEWSPSSEWVLATGSADGAIRLWDIRRASGC 224 (397)
T ss_pred eehhhcChhhhcceEEEEecC-CCcEEEEeccCCcceeeeccccCceEEEEeccCceeEEEecCCCceEEEEEeecccce
Confidence 44333444 22345445664 77899999999999999999999999998 899999999 999999865 23
Q ss_pred eeeEEeecC------------cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC
Q psy505 86 LEQIYENSQ------------EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 86 ~~~~~~~~~------------~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~ 129 (161)
+ ..+..|. +.-.+..++|++++..+++.+.|+.+++|+...|+
T Consensus 225 f-~~lD~hn~k~~p~~~~n~ah~gkvngla~tSd~~~l~~~gtd~r~r~wn~~~G~ 279 (397)
T KOG4283|consen 225 F-RVLDQHNTKRPPILKTNTAHYGKVNGLAWTSDARYLASCGTDDRIRVWNMESGR 279 (397)
T ss_pred e-EEeecccCccCccccccccccceeeeeeecccchhhhhccCccceEEeecccCc
Confidence 3 2333332 12247789999999999998889999999999886
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.3e-11 Score=98.45 Aligned_cols=119 Identities=10% Similarity=0.150 Sum_probs=88.5
Q ss_pred eEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------eEEEecCCc-eEEEEeCCcCceeeE-EeecCcc
Q psy505 27 CYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFSLNSIDTLEQI-YENSQED 96 (161)
Q Consensus 27 ~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd~~~~~~~~~~-~~~~~~~ 96 (161)
..+|++-+ .|+||++|..+++.+..|.+|...++.+. .+.+|+.|| ||+||+|+......+ +.++. +
T Consensus 41 ~~vav~lS--ngsv~lyd~~tg~~l~~fk~~~~~~N~vrf~~~ds~h~v~s~ssDG~Vr~wD~Rs~~e~a~~~~~~~~-~ 117 (376)
T KOG1188|consen 41 TAVAVSLS--NGSVRLYDKGTGQLLEEFKGPPATTNGVRFISCDSPHGVISCSSDGTVRLWDIRSQAESARISWTQQS-G 117 (376)
T ss_pred eeEEEEec--CCeEEEEeccchhhhheecCCCCcccceEEecCCCCCeeEEeccCCeEEEEEeecchhhhheeccCCC-C
Confidence 44666666 79999999999999999999999998877 678999999 999999986544322 23333 2
Q ss_pred eEEEEEeecCCeEEEEec----CCCCeEEEEecCCCCe-EEEE--EecCceEEEEECCc
Q psy505 97 VCIVERLFSSSLVAVVSL----SSPRKLTVCHFKRGSE-ICNY--SFSNTILAVKLNRK 148 (161)
Q Consensus 97 ~~v~~~~fs~~~~~~~s~----~~d~~i~iWD~~~~~~-i~~l--~~~~~V~~v~~~~~ 148 (161)
...++++-.-+...++.| .++-.|.+||++..+. +..+ +|.+-|..|+|+|.
T Consensus 118 ~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~eSH~DDVT~lrFHP~ 176 (376)
T KOG1188|consen 118 TPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLNESHNDDVTQLRFHPS 176 (376)
T ss_pred CcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhhhhccCcceeEEecCC
Confidence 345566654334344443 3456799999998776 6666 38899999999885
|
|
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=99.31 E-value=2.5e-11 Score=98.66 Aligned_cols=129 Identities=13% Similarity=0.092 Sum_probs=101.7
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCceEEEEeCCcCceee---
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSGYRLFSLNSIDTLEQ--- 88 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dgiriwd~~~~~~~~~--- 88 (161)
..|++++||..+|++|. ||++|||+..+...+..+.+|..+|.++. +||+-+.|..+||++++|.++.+
T Consensus 148 k~vaf~~~gs~latgg~--dg~lRv~~~Ps~~t~l~e~~~~~eV~DL~FS~dgk~lasig~d~~~VW~~~~g~~~a~~t~ 225 (398)
T KOG0771|consen 148 KVVAFNGDGSKLATGGT--DGTLRVWEWPSMLTILEEIAHHAEVKDLDFSPDGKFLASIGADSARVWSVNTGAALARKTP 225 (398)
T ss_pred eEEEEcCCCCEeeeccc--cceEEEEecCcchhhhhhHhhcCccccceeCCCCcEEEEecCCceEEEEeccCchhhhcCC
Confidence 46777889999999775 99999999998998899999999999999 88888888999999998821110
Q ss_pred ----------------------EEe---ecC-----------------------cceEEEEEeecCCeEEEEecCCCCeE
Q psy505 89 ----------------------IYE---NSQ-----------------------EDVCIVERLFSSSLVAVVSLSSPRKL 120 (161)
Q Consensus 89 ----------------------~~~---~~~-----------------------~~~~v~~~~fs~~~~~~~s~~~d~~i 120 (161)
+.. .+. ..-.+.+|+-|.++..++=|+-|+.|
T Consensus 226 ~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsV 305 (398)
T KOG0771|consen 226 FSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLCDISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSV 305 (398)
T ss_pred cccchhhhhceecccCCCceEEEEEecCCCCceeEEEeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcE
Confidence 000 000 00146678888888877777789999
Q ss_pred EEEecCCCCeEEEEE--ecCceEEEEECCc
Q psy505 121 TVCHFKRGSEICNYS--FSNTILAVKLNRK 148 (161)
Q Consensus 121 ~iWD~~~~~~i~~l~--~~~~V~~v~~~~~ 148 (161)
-|++..+-+++.-.. |...|.+|.|+|+
T Consensus 306 ai~~~~~lq~~~~vk~aH~~~VT~ltF~Pd 335 (398)
T KOG0771|consen 306 AIYDAKSLQRLQYVKEAHLGFVTGLTFSPD 335 (398)
T ss_pred EEEEeceeeeeEeehhhheeeeeeEEEcCC
Confidence 999999888776654 5679999999998
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=99.30 E-value=4e-11 Score=101.89 Aligned_cols=145 Identities=11% Similarity=0.119 Sum_probs=95.5
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceee--eeccCccceeee-------eEEEecCCc-eEEEEeCC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTM--IPAHDSPLAALA-------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~--l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~ 82 (161)
|-..|.-+.+-|....|++.++ |.++|.||+.+.+++.. +.||+..|.+++ .|++|+.|| |.|||++-
T Consensus 99 H~nAifDl~wapge~~lVsasG--DsT~r~Wdvk~s~l~G~~~~~GH~~SvkS~cf~~~n~~vF~tGgRDg~illWD~R~ 176 (720)
T KOG0321|consen 99 HKNAIFDLKWAPGESLLVSASG--DSTIRPWDVKTSRLVGGRLNLGHTGSVKSECFMPTNPAVFCTGGRDGEILLWDCRC 176 (720)
T ss_pred ccceeEeeccCCCceeEEEccC--CceeeeeeeccceeecceeecccccccchhhhccCCCcceeeccCCCcEEEEEEec
Confidence 3345888888885556666554 99999999999988766 899999999999 899999999 99999863
Q ss_pred cCc------eeeEEeecC------------------cce----EEEEEeecCCeEEEEecC-CCCeEEEEecCCCCeEEE
Q psy505 83 IDT------LEQIYENSQ------------------EDV----CIVERLFSSSLVAVVSLS-SPRKLTVCHFKRGSEICN 133 (161)
Q Consensus 83 ~~~------~~~~~~~~~------------------~~~----~v~~~~fs~~~~~~~s~~-~d~~i~iWD~~~~~~i~~ 133 (161)
-.. ...++.+|. ... +|..++|- |...+++++ .|++|||||+++..+...
T Consensus 177 n~~d~~e~~~~~~~~~~n~~ptpskp~~kr~~k~kA~s~ti~ssvTvv~fk-De~tlaSaga~D~~iKVWDLRk~~~~~r 255 (720)
T KOG0321|consen 177 NGVDALEEFDNRIYGRHNTAPTPSKPLKKRIRKWKAASNTIFSSVTVVLFK-DESTLASAGAADSTIKVWDLRKNYTAYR 255 (720)
T ss_pred cchhhHHHHhhhhhccccCCCCCCchhhccccccccccCceeeeeEEEEEe-ccceeeeccCCCcceEEEeecccccccc
Confidence 210 001111111 111 23334443 434455544 499999999998765544
Q ss_pred EE------ecC------ceEEEEECC---cEEEEEeccceee
Q psy505 134 YS------FSN------TILAVKLNR---KKEEEEDEEEEKK 160 (161)
Q Consensus 134 l~------~~~------~V~~v~~~~---~~~vv~~~~~~~~ 160 (161)
.. ++. .+.++.... ..++-|.++.|+-
T Consensus 256 ~ep~~~~~~~t~skrs~G~~nL~lDssGt~L~AsCtD~sIy~ 297 (720)
T KOG0321|consen 256 QEPRGSDKYPTHSKRSVGQVNLILDSSGTYLFASCTDNSIYF 297 (720)
T ss_pred cCCCcccCccCcccceeeeEEEEecCCCCeEEEEecCCcEEE
Confidence 32 211 344454433 3678888888873
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.30 E-value=2.7e-10 Score=89.45 Aligned_cols=133 Identities=20% Similarity=0.334 Sum_probs=102.2
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCc
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~ 83 (161)
.+...+..++++|++..++.++.. |+.+++|++.+++.+..+.+|...|.++. ++++++.|+ +++||..++
T Consensus 153 ~~~~~v~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~d~~i~~wd~~~~ 231 (466)
T COG2319 153 GHSESVTSLAFSPDGKLLASGSSL-DGTIKLWDLRTGKPLSTLAGHTDPVSSLAFSPDGGLLIASGSSDGTIRLWDLSTG 231 (466)
T ss_pred cCcccEEEEEECCCCCEEEecCCC-CCceEEEEcCCCceEEeeccCCCceEEEEEcCCcceEEEEecCCCcEEEEECCCC
Confidence 344557788999999888876643 89999999999899999999999999999 344448899 999998876
Q ss_pred CceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCe-EEEE-EecCceEEEEECCc
Q psy505 84 DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE-ICNY-SFSNTILAVKLNRK 148 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~-i~~l-~~~~~V~~v~~~~~ 148 (161)
..+...+.+|.... +. .|+|++..+++++.|+.+++||...... +..+ .+...|.++.|+|+
T Consensus 232 ~~~~~~~~~~~~~~-~~--~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 295 (466)
T COG2319 232 KLLRSTLSGHSDSV-VS--SFSPDGSLLASGSSDGTIRLWDLRSSSSLLRTLSGHSSSVLSVAFSPD 295 (466)
T ss_pred cEEeeecCCCCcce-eE--eECCCCCEEEEecCCCcEEEeeecCCCcEEEEEecCCccEEEEEECCC
Confidence 65532566776443 32 7888875556777899999999987765 4444 34689999999993
|
|
| >KOG1273|consensus | Back alignment and domain information |
|---|
Probab=99.28 E-value=2.1e-11 Score=96.65 Aligned_cols=80 Identities=13% Similarity=0.287 Sum_probs=73.3
Q ss_pred eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEE
Q psy505 66 SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVK 144 (161)
Q Consensus 66 ~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~ 144 (161)
+||+|..|| +-|||..|.. ..+++.+|..+ |.+++||+++..++++|.|+.|++||+..|.++.++.|+++|+.+.
T Consensus 37 ~lAvGc~nG~vvI~D~~T~~-iar~lsaH~~p--i~sl~WS~dgr~LltsS~D~si~lwDl~~gs~l~rirf~spv~~~q 113 (405)
T KOG1273|consen 37 YLAVGCANGRVVIYDFDTFR-IARMLSAHVRP--ITSLCWSRDGRKLLTSSRDWSIKLWDLLKGSPLKRIRFDSPVWGAQ 113 (405)
T ss_pred eeeeeccCCcEEEEEccccc-hhhhhhccccc--eeEEEecCCCCEeeeecCCceeEEEeccCCCceeEEEccCccceee
Confidence 999999999 9999998865 55788888754 7889999999999999999999999999999999999999999999
Q ss_pred ECCc
Q psy505 145 LNRK 148 (161)
Q Consensus 145 ~~~~ 148 (161)
|+|.
T Consensus 114 ~hp~ 117 (405)
T KOG1273|consen 114 WHPR 117 (405)
T ss_pred eccc
Confidence 9885
|
|
| >KOG1274|consensus | Back alignment and domain information |
|---|
Probab=99.26 E-value=1.3e-10 Score=101.93 Aligned_cols=133 Identities=13% Similarity=0.193 Sum_probs=110.3
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC-CceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCc
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-HAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~ 85 (161)
.|..|.+.++++|+|..|.++|+ ||.||+|+..+- ....++.-|...|.+++ .|++|++++ |.+|...+++.
T Consensus 11 aht~G~t~i~~d~~gefi~tcgs--dg~ir~~~~~sd~e~P~ti~~~g~~v~~ia~~s~~f~~~s~~~tv~~y~fps~~~ 88 (933)
T KOG1274|consen 11 AHTGGLTLICYDPDGEFICTCGS--DGDIRKWKTNSDEEEPETIDISGELVSSIACYSNHFLTGSEQNTVLRYKFPSGEE 88 (933)
T ss_pred hccCceEEEEEcCCCCEEEEecC--CCceEEeecCCcccCCchhhccCceeEEEeecccceEEeeccceEEEeeCCCCCc
Confidence 35678999999999999999887 999999998776 55667776899999999 999999999 99999988764
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK 149 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~ 149 (161)
-.-+-+. ...+..++|+.+|..++.|++|-.||+-+.........+. |..+|++|.|+|++
T Consensus 89 ~~iL~Rf---tlp~r~~~v~g~g~~iaagsdD~~vK~~~~~D~s~~~~lrgh~apVl~l~~~p~~ 150 (933)
T KOG1274|consen 89 DTILARF---TLPIRDLAVSGSGKMIAAGSDDTAVKLLNLDDSSQEKVLRGHDAPVLQLSYDPKG 150 (933)
T ss_pred cceeeee---eccceEEEEecCCcEEEeecCceeEEEEeccccchheeecccCCceeeeeEcCCC
Confidence 3222222 2346778899999999999999999999999888777776 68999999999974
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.25 E-value=8.1e-11 Score=93.55 Aligned_cols=147 Identities=17% Similarity=0.185 Sum_probs=98.6
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC--------CceeeeeccCccceeee------eEE
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL--------HAKTMIPAHDSPLAALA------SLS 68 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~--------~~~~~l~~H~~~V~~l~------~la 68 (161)
+|.+| ++.....--+++ +|+|..+|++|. ...|++|.+-=+ +.+-.|.||.+.|...+ .++
T Consensus 220 ~L~~i-dtnq~~n~~aav--SP~GRFia~~gF--TpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~v 294 (420)
T KOG2096|consen 220 LLQSI-DTNQSSNYDAAV--SPDGRFIAVSGF--TPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAV 294 (420)
T ss_pred eeeee-ccccccccceee--CCCCcEEEEecC--CCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeE
Confidence 45566 443333233444 679999999887 789999986422 34567899999999988 899
Q ss_pred EecCCc-eEEEEeCC----cCceeeEEee----cC-cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--e
Q psy505 69 VGTKSG-YRLFSLNS----IDTLEQIYEN----SQ-EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--F 136 (161)
Q Consensus 69 sgs~dg-iriwd~~~----~~~~~~~~~~----~~-~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--~ 136 (161)
+.|.|| +||||+.- ++.-..+..| |. ++..+ .+..+|++..++-.. ..+|+++..++|+-..+++ |
T Consensus 295 tvSkDG~wriwdtdVrY~~~qDpk~Lk~g~~pl~aag~~p~-RL~lsP~g~~lA~s~-gs~l~~~~se~g~~~~~~e~~h 372 (420)
T KOG2096|consen 295 TVSKDGKWRIWDTDVRYEAGQDPKILKEGSAPLHAAGSEPV-RLELSPSGDSLAVSF-GSDLKVFASEDGKDYPELEDIH 372 (420)
T ss_pred EEecCCcEEEeeccceEecCCCchHhhcCCcchhhcCCCce-EEEeCCCCcEEEeec-CCceEEEEcccCccchhHHHhh
Confidence 999999 99999742 1111011111 11 11122 556677665544321 2369999999999877775 7
Q ss_pred cCceEEEEECCc--EEEEEecc
Q psy505 137 SNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 137 ~~~V~~v~~~~~--~~vv~~~~ 156 (161)
...|.++.|+++ .++.|.+.
T Consensus 373 ~~~Is~is~~~~g~~~atcGdr 394 (420)
T KOG2096|consen 373 STTISSISYSSDGKYIATCGDR 394 (420)
T ss_pred cCceeeEEecCCCcEEeeecce
Confidence 889999999997 55555544
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=9.9e-11 Score=92.02 Aligned_cols=138 Identities=14% Similarity=0.245 Sum_probs=101.9
Q ss_pred eeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCc---eeeeeccCccceeee-------eEEEecCCc-eEEEEeCCc
Q psy505 16 GICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHA---KTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 16 ~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~---~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~ 83 (161)
.+.+|-.+. |..++.+++. |-+.-|||++++.. ...|-||..+|.+++ .|||.+.|| +|+||++.-
T Consensus 152 PlTSFDWne~dp~~igtSSi--DTTCTiWdie~~~~~~vkTQLIAHDKEV~DIaf~~~s~~~FASvgaDGSvRmFDLR~l 229 (364)
T KOG0290|consen 152 PLTSFDWNEVDPNLIGTSSI--DTTCTIWDIETGVSGTVKTQLIAHDKEVYDIAFLKGSRDVFASVGADGSVRMFDLRSL 229 (364)
T ss_pred cccccccccCCcceeEeecc--cCeEEEEEEeeccccceeeEEEecCcceeEEEeccCccceEEEecCCCcEEEEEeccc
Confidence 456666665 5667777665 99999999999743 677899999999999 899999999 999999864
Q ss_pred CceeeEEeecCcceEEEEEeec---CCeEEEEecCCCCeEEEEecCC-CCeEEEEE-ecCceEEEEECCc---EEEEEec
Q psy505 84 DTLEQIYENSQEDVCIVERLFS---SSLVAVVSLSSPRKLTVCHFKR-GSEICNYS-FSNTILAVKLNRK---KEEEEDE 155 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs---~~~~~~~s~~~d~~i~iWD~~~-~~~i~~l~-~~~~V~~v~~~~~---~~vv~~~ 155 (161)
+--.-+++..........++++ |++.++.... .+.|.|-|++- ...+.+|. |...|++++|.|. ++..+.+
T Consensus 230 eHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~d-S~~V~iLDiR~P~tpva~L~~H~a~VNgIaWaPhS~~hictaGD 308 (364)
T KOG0290|consen 230 EHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMD-SNKVVILDIRVPCTPVARLRNHQASVNGIAWAPHSSSHICTAGD 308 (364)
T ss_pred ccceEEecCCCCCCcceeeccCcCCchHHhhhhcC-CceEEEEEecCCCcceehhhcCcccccceEecCCCCceeeecCC
Confidence 4222244443323345667776 5666666543 35799999986 56677776 7899999999764 7776666
Q ss_pred c
Q psy505 156 E 156 (161)
Q Consensus 156 ~ 156 (161)
|
T Consensus 309 D 309 (364)
T KOG0290|consen 309 D 309 (364)
T ss_pred c
Confidence 5
|
|
| >KOG0270|consensus | Back alignment and domain information |
|---|
Probab=99.24 E-value=8.7e-11 Score=96.23 Aligned_cols=119 Identities=15% Similarity=0.192 Sum_probs=91.6
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCc---eee------------------eeccCccceeee-------eEEEecCCc-e
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHA---KTM------------------IPAHDSPLAALA-------SLSVGTKSG-Y 75 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~---~~~------------------l~~H~~~V~~l~-------~lasgs~dg-i 75 (161)
-|+++|.+.. |..|.|||+.=... ..+ -++|++.|-+++ .|||||.|. |
T Consensus 191 ~gNyvAiGtm--dp~IeIWDLDI~d~v~P~~~LGs~~sk~~~k~~k~~~~~~gHTdavl~Ls~n~~~~nVLaSgsaD~TV 268 (463)
T KOG0270|consen 191 AGNYVAIGTM--DPEIEIWDLDIVDAVLPCVTLGSKASKKKKKKGKRSNSASGHTDAVLALSWNRNFRNVLASGSADKTV 268 (463)
T ss_pred CcceEEEecc--CceeEEeccccccccccceeechhhhhhhhhhcccccccccchHHHHHHHhccccceeEEecCCCceE
Confidence 4679998665 89999999864321 111 237999998888 999999999 9
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeE-EEEEecCceEEEEECCc
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEI-CNYSFSNTILAVKLNRK 148 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i-~~l~~~~~V~~v~~~~~ 148 (161)
++||+.+|++. .++..|.. .|.++.|.| ....+++|+-|++|.+.|.+.-.+. ...++.+.|-.|+|+|.
T Consensus 269 ~lWD~~~g~p~-~s~~~~~k--~Vq~l~wh~~~p~~LLsGs~D~~V~l~D~R~~~~s~~~wk~~g~VEkv~w~~~ 340 (463)
T KOG0270|consen 269 KLWDVDTGKPK-SSITHHGK--KVQTLEWHPYEPSVLLSGSYDGTVALKDCRDPSNSGKEWKFDGEVEKVAWDPH 340 (463)
T ss_pred EEEEcCCCCcc-eehhhcCC--ceeEEEecCCCceEEEeccccceEEeeeccCccccCceEEeccceEEEEecCC
Confidence 99999999876 56666654 477888886 5567888888999999999853333 34667889999999774
|
|
| >KOG0303|consensus | Back alignment and domain information |
|---|
Probab=99.23 E-value=4.6e-11 Score=96.97 Aligned_cols=100 Identities=9% Similarity=0.185 Sum_probs=77.9
Q ss_pred eeeccCccceeee-------eEEEecCCc-eEEEEeCCcC-------ceeeEEeecCcceEEEEEeecCC-eEEEEecCC
Q psy505 53 MIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSID-------TLEQIYENSQEDVCIVERLFSSS-LVAVVSLSS 116 (161)
Q Consensus 53 ~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~-------~~~~~~~~~~~~~~v~~~~fs~~-~~~~~s~~~ 116 (161)
.+.||+.+|-++. -+||||+|. |+||++-.+. +. ..+.||.. .|--++|+|. .-.+.|++.
T Consensus 76 ~v~GHt~~vLDi~w~PfnD~vIASgSeD~~v~vW~IPe~~l~~~ltepv-v~L~gH~r--rVg~V~wHPtA~NVLlsag~ 152 (472)
T KOG0303|consen 76 LVCGHTAPVLDIDWCPFNDCVIASGSEDTKVMVWQIPENGLTRDLTEPV-VELYGHQR--RVGLVQWHPTAPNVLLSAGS 152 (472)
T ss_pred CccCccccccccccCccCCceeecCCCCceEEEEECCCcccccCcccce-EEEeecce--eEEEEeecccchhhHhhccC
Confidence 4679999999988 899999999 9999976432 22 35567864 3555678862 224556667
Q ss_pred CCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEec
Q psy505 117 PRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 117 d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~~ 155 (161)
|++|+|||+.+|+.+-++.|++.|+++.||.++-.+|+.
T Consensus 153 Dn~v~iWnv~tgeali~l~hpd~i~S~sfn~dGs~l~Tt 191 (472)
T KOG0303|consen 153 DNTVSIWNVGTGEALITLDHPDMVYSMSFNRDGSLLCTT 191 (472)
T ss_pred CceEEEEeccCCceeeecCCCCeEEEEEeccCCceeeee
Confidence 999999999999999999999999999999985444443
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=5.7e-10 Score=88.25 Aligned_cols=142 Identities=11% Similarity=0.051 Sum_probs=98.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC----CceeeeeccCccceeee--------eEEEecCCc-eEEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL----HAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~----~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd 79 (161)
+.+-+-.++|++-|..+|++++ |++|+|||.+.. .+-...++|.+.|.-+. .+|++|.|+ ++||.
T Consensus 12 h~DlihdVs~D~~GRRmAtCSs--Dq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 12 HKDLIHDVSFDFYGRRMATCSS--DQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred CcceeeeeeecccCceeeeccC--CCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 3355889999999999999887 999999997654 35667899999999998 899999999 99998
Q ss_pred eCCc--Cc--eeeEEe--ecCcceEEEEEeecC--CeEEEEecCCCCeEEEEecCC------CCeEEEEE--------ec
Q psy505 80 LNSI--DT--LEQIYE--NSQEDVCIVERLFSS--SLVAVVSLSSPRKLTVCHFKR------GSEICNYS--------FS 137 (161)
Q Consensus 80 ~~~~--~~--~~~~~~--~~~~~~~v~~~~fs~--~~~~~~s~~~d~~i~iWD~~~------~~~i~~l~--------~~ 137 (161)
=... +. .+-..+ --.....+..+.|.| -|+.+++++.|+.||||+.-. -+...++. +.
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aDG~lRIYEA~dp~nLs~W~Lq~Ei~~~~~pp~~~~ 169 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASADGILRIYEAPDPMNLSQWTLQHEIQNVIDPPGKNK 169 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccCcEEEEEecCCccccccchhhhhhhhccCCccccc
Confidence 5211 10 000100 011223466677776 677889999999999997543 23333333 33
Q ss_pred CceEEEEECCc-----EEEEEecc
Q psy505 138 NTILAVKLNRK-----KEEEEDEE 156 (161)
Q Consensus 138 ~~V~~v~~~~~-----~~vv~~~~ 156 (161)
.+-.+|.|||. .++|-.++
T Consensus 170 ~~~~CvsWn~sr~~~p~iAvgs~e 193 (361)
T KOG2445|consen 170 QPCFCVSWNPSRMHEPLIAVGSDE 193 (361)
T ss_pred CcceEEeeccccccCceEEEEccc
Confidence 45667777664 56666665
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=99.22 E-value=1.5e-10 Score=92.14 Aligned_cols=141 Identities=18% Similarity=0.197 Sum_probs=107.5
Q ss_pred eEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc--eEEEEeCCc-Cce
Q psy505 17 ICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG--YRLFSLNSI-DTL 86 (161)
Q Consensus 17 v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg--iriwd~~~~-~~~ 86 (161)
+.+++++| +...+|.++- ..++-|+.-..++++..+-+|.+.|+-++ .|.+|+..- |-.||++.. +++
T Consensus 210 isc~a~sP~~~~~~a~gsY--~q~~giy~~~~~~pl~llggh~gGvThL~~~edGn~lfsGaRk~dkIl~WDiR~~~~pv 287 (406)
T KOG2919|consen 210 ISCFAFSPMDSKTLAVGSY--GQRVGIYNDDGRRPLQLLGGHGGGVTHLQWCEDGNKLFSGARKDDKILCWDIRYSRDPV 287 (406)
T ss_pred eeeeeccCCCCcceeeecc--cceeeeEecCCCCceeeecccCCCeeeEEeccCcCeecccccCCCeEEEEeehhccchh
Confidence 45788888 5668887554 67889999889999999999999999998 777888654 999999864 444
Q ss_pred eeEEeecCc-ceEEEEEeecCCeEEEEecCCCCeEEEEecCC-CCeEEEEE-ecCceEEEEECCcE--EEEEeccceee
Q psy505 87 EQIYENSQE-DVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR-GSEICNYS-FSNTILAVKLNRKK--EEEEDEEEEKK 160 (161)
Q Consensus 87 ~~~~~~~~~-~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~-~~~i~~l~-~~~~V~~v~~~~~~--~vv~~~~~~~~ 160 (161)
..+ .+|.. +..-+-+...|.+..++||+.|+.|++||++. |..+..+. +.+.|++|.+||-. ++++...+|.+
T Consensus 288 ~~L-~rhv~~TNQRI~FDld~~~~~LasG~tdG~V~vwdlk~~gn~~sv~~~~sd~vNgvslnP~mpilatssGqr~f~ 365 (406)
T KOG2919|consen 288 YAL-ERHVGDTNQRILFDLDPKGEILASGDTDGSVRVWDLKDLGNEVSVTGNYSDTVNGVSLNPIMPILATSSGQRIFK 365 (406)
T ss_pred hhh-hhhccCccceEEEecCCCCceeeccCCCccEEEEecCCCCCcccccccccccccceecCcccceeeeccCceeec
Confidence 333 34442 32344566679999999999999999999998 77665554 68999999999984 44444556554
|
|
| >KOG4378|consensus | Back alignment and domain information |
|---|
Probab=99.21 E-value=4.8e-10 Score=93.47 Aligned_cols=139 Identities=14% Similarity=0.144 Sum_probs=106.9
Q ss_pred CCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeee-eccCccceeee-------eEEEecCCc-eEEEEe
Q psy505 10 TPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMI-PAHDSPLAALA-------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 10 ~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l-~~H~~~V~~l~-------~lasgs~dg-iriwd~ 80 (161)
++++...|.-+-++|....+.+..+. +|.|.|||+..+++...+ .+|..|.++++ +|++-+.|. |.+||.
T Consensus 160 ~~~sgqsvRll~ys~skr~lL~~asd-~G~VtlwDv~g~sp~~~~~~~HsAP~~gicfspsne~l~vsVG~Dkki~~yD~ 238 (673)
T KOG4378|consen 160 TIDSGQSVRLLRYSPSKRFLLSIASD-KGAVTLWDVQGMSPIFHASEAHSAPCRGICFSPSNEALLVSVGYDKKINIYDI 238 (673)
T ss_pred ecCCCCeEEEeecccccceeeEeecc-CCeEEEEeccCCCcccchhhhccCCcCcceecCCccceEEEecccceEEEeec
Confidence 35556667788888877666555564 999999999998887665 68999999998 888888888 999999
Q ss_pred CCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC-CeEEEEE-ecCceEEEEECCcEEEEEe
Q psy505 81 NSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG-SEICNYS-FSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~-~~i~~l~-~~~~V~~v~~~~~~~vv~~ 154 (161)
++.... ..+.... ....++|+++|.+++.|...+.|.-||++.. +++..+. |...|.+|+|-|.. +|+.
T Consensus 239 ~s~~s~-~~l~y~~---Plstvaf~~~G~~L~aG~s~G~~i~YD~R~~k~Pv~v~sah~~sVt~vafq~s~-tvlt 309 (673)
T KOG4378|consen 239 RSQAST-DRLTYSH---PLSTVAFSECGTYLCAGNSKGELIAYDMRSTKAPVAVRSAHDASVTRVAFQPSP-TVLT 309 (673)
T ss_pred cccccc-ceeeecC---CcceeeecCCceEEEeecCCceEEEEecccCCCCceEeeecccceeEEEeeecc-eeee
Confidence 875432 2332221 3557899999999999988899999999864 4666665 67789999997776 4443
|
|
| >KOG1034|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=5.9e-10 Score=88.82 Aligned_cols=136 Identities=17% Similarity=0.215 Sum_probs=98.7
Q ss_pred ceeEEeecCC-----CceEEEEcCCCCcceEEEEEcCCCC---ceeeee--ccCccceeee----------eEEEecCCc
Q psy505 15 NGICCLCVNS-----DNCYLAYPGSNSIGEVQIFDADNLH---AKTMIP--AHDSPLAALA----------SLSVGTKSG 74 (161)
Q Consensus 15 ~~v~~~~~~~-----d~~~la~~g~~~dg~v~iWd~~~~~---~~~~l~--~H~~~V~~l~----------~lasgs~dg 74 (161)
..++.++|++ +...+|+.|+ ..+.++.....- .++.+. .|...-..++ ++|.|+..|
T Consensus 39 ~~I~gv~fN~~~~~~e~~vfatvG~---~rvtiy~c~~d~~ir~lq~y~D~d~~Esfytcsw~yd~~~~~p~la~~G~~G 115 (385)
T KOG1034|consen 39 KPIFGVAFNSFLGCDEPQVFATVGG---NRVTIYECPGDGGIRLLQSYADEDHDESFYTCSWSYDSNTGNPFLAAGGYLG 115 (385)
T ss_pred CccceeeeehhcCCCCCceEEEeCC---cEEEEEEECCccceeeeeeccCCCCCcceEEEEEEecCCCCCeeEEeeccee
Confidence 4577777764 3456677664 578888866432 333332 2444444444 888888999
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe-EEEEecCCCCeEEEEecCCCCeEEEEE----ecCceEEEEECCc
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL-VAVVSLSSPRKLTVCHFKRGSEICNYS----FSNTILAVKLNRK 148 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~-~~~~s~~~d~~i~iWD~~~~~~i~~l~----~~~~V~~v~~~~~ 148 (161)
|||.|+.+++. ..-++||.+. |.++-|.|.. ..++|+|.|.+||+||+++..|+..+. |++.|++|.|+++
T Consensus 116 vIrVid~~~~~~-~~~~~ghG~s--INeik~~p~~~qlvls~SkD~svRlwnI~~~~Cv~VfGG~egHrdeVLSvD~~~~ 192 (385)
T KOG1034|consen 116 VIRVIDVVSGQC-SKNYRGHGGS--INEIKFHPDRPQLVLSASKDHSVRLWNIQTDVCVAVFGGVEGHRDEVLSVDFSLD 192 (385)
T ss_pred EEEEEecchhhh-ccceeccCcc--chhhhcCCCCCcEEEEecCCceEEEEeccCCeEEEEecccccccCcEEEEEEcCC
Confidence 99999998764 4677899764 7788888743 456778899999999999999999884 6899999999987
Q ss_pred --EEEEEecc
Q psy505 149 --KEEEEDEE 156 (161)
Q Consensus 149 --~~vv~~~~ 156 (161)
+++-+..|
T Consensus 193 gd~i~ScGmD 202 (385)
T KOG1034|consen 193 GDRIASCGMD 202 (385)
T ss_pred CCeeeccCCc
Confidence 55555443
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.3e-10 Score=95.78 Aligned_cols=126 Identities=17% Similarity=0.271 Sum_probs=89.8
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------eEEEecCCc-eEEEEeCCc--
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFSLNSI-- 83 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd~~~~-- 83 (161)
--|..+.|+.||..|.++|+ +|.|.+||+++.++++.+... +.|...+ |||+||+.| |.|||..+.
T Consensus 345 G~v~~~~fsSdsk~l~~~~~--~GeV~v~nl~~~~~~~rf~D~-G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~ 421 (514)
T KOG2055|consen 345 GVVSDFTFSSDSKELLASGG--TGEVYVWNLRQNSCLHRFVDD-GSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFA 421 (514)
T ss_pred cEEeeEEEecCCcEEEEEcC--CceEEEEecCCcceEEEEeec-CccceeeeeecCCCceEEeccCcceEEEeccchhhc
Confidence 34778888899998888777 899999999999999998742 3343222 999999999 999996542
Q ss_pred ----CceeeEEeecCcceEEEEEeecCCe--EEEEecCCCCeEEEEecCCCCeEEEEE-ec------CceEEEEECCcE
Q psy505 84 ----DTLEQIYENSQEDVCIVERLFSSSL--VAVVSLSSPRKLTVCHFKRGSEICNYS-FS------NTILAVKLNRKK 149 (161)
Q Consensus 84 ----~~~~~~~~~~~~~~~v~~~~fs~~~--~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~------~~V~~v~~~~~~ 149 (161)
+|+..+ ..-...|.+|.|+|+. ++++|...++.+|+=-+-... .|+ |+ +.|.+++|+|..
T Consensus 422 s~~PkPik~~---dNLtt~Itsl~Fn~d~qiLAiaS~~~knalrLVHvPS~T---VFsNfP~~n~~vg~vtc~aFSP~s 494 (514)
T KOG2055|consen 422 STNPKPIKTV---DNLTTAITSLQFNHDAQILAIASRVKKNALRLVHVPSCT---VFSNFPTSNTKVGHVTCMAFSPNS 494 (514)
T ss_pred cCCCCchhhh---hhhheeeeeeeeCcchhhhhhhhhccccceEEEecccee---eeccCCCCCCcccceEEEEecCCC
Confidence 122111 1113457889999865 456666678889987765433 333 43 469999999963
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=1.6e-10 Score=95.04 Aligned_cols=144 Identities=9% Similarity=0.114 Sum_probs=102.9
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc-eeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCc
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA-KTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~-~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~ 85 (161)
.+.+.+-++.+...+..+.. -|...+||+++.+. ...+.-|+..|++++ +|||||.|+ .||||++.=..
T Consensus 280 ~~fs~~d~~~e~~~vl~~~~--~G~f~~iD~R~~~s~~~~~~lh~kKI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~ 357 (498)
T KOG4328|consen 280 IWFSSLDFSAESRSVLFGDN--VGNFNVIDLRTDGSEYENLRLHKKKITSVALNPVCPWFLATASLDQTAKIWDLRQLRG 357 (498)
T ss_pred eeeeeccccCCCccEEEeec--ccceEEEEeecCCccchhhhhhhcccceeecCCCCchheeecccCcceeeeehhhhcC
Confidence 45667777655545555454 47999999999765 566788999999999 999999999 99999975322
Q ss_pred eee-EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEec----CCCCeEEEEEecC------ceEEEEECCcEEEEEe
Q psy505 86 LEQ-IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF----KRGSEICNYSFSN------TILAVKLNRKKEEEED 154 (161)
Q Consensus 86 ~~~-~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~----~~~~~i~~l~~~~------~V~~v~~~~~~~vv~~ 154 (161)
-.. ++..-.+.-.|.+..|||.+.-+++...|+.|+|||. ..-...+++.|+. +....+|.|+..+++.
T Consensus 358 K~sp~lst~~HrrsV~sAyFSPs~gtl~TT~~D~~IRv~dss~~sa~~~p~~~I~Hn~~t~RwlT~fKA~W~P~~~li~v 437 (498)
T KOG4328|consen 358 KASPFLSTLPHRRSVNSAYFSPSGGTLLTTCQDNEIRVFDSSCISAKDEPLGTIPHNNRTGRWLTPFKAAWDPDYNLIVV 437 (498)
T ss_pred CCCcceecccccceeeeeEEcCCCCceEeeccCCceEEeecccccccCCccceeeccCcccccccchhheeCCCccEEEE
Confidence 111 2222122345788899998777888778999999999 4445556666642 4667889999777776
Q ss_pred ccceee
Q psy505 155 EEEEKK 160 (161)
Q Consensus 155 ~~~~~~ 160 (161)
.+-.++
T Consensus 438 g~~~r~ 443 (498)
T KOG4328|consen 438 GRYPRP 443 (498)
T ss_pred eccCcc
Confidence 665544
|
|
| >KOG2096|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=3.8e-10 Score=89.81 Aligned_cols=138 Identities=12% Similarity=0.149 Sum_probs=93.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-----ce-eeee-ccCccce-----------------------
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-----AK-TMIP-AHDSPLA----------------------- 62 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-----~~-~~l~-~H~~~V~----------------------- 62 (161)
|...|..++|+.||+++|+.+. |++|||||++... ++ .+++ +|...|.
T Consensus 85 H~~~vt~~~FsSdGK~lat~~~--Dr~Ir~w~~~DF~~~eHr~~R~nve~dhpT~V~FapDc~s~vv~~~~g~~l~vyk~ 162 (420)
T KOG2096|consen 85 HKKEVTDVAFSSDGKKLATISG--DRSIRLWDVRDFENKEHRCIRQNVEYDHPTRVVFAPDCKSVVVSVKRGNKLCVYKL 162 (420)
T ss_pred cCCceeeeEEcCCCceeEEEeC--CceEEEEecchhhhhhhhHhhccccCCCceEEEECCCcceEEEEEccCCEEEEEEe
Confidence 4456889999999999999876 9999999988642 11 1111 2333321
Q ss_pred -----------------------------e--ee----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecC
Q psy505 63 -----------------------------A--LA----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSS 106 (161)
Q Consensus 63 -----------------------------~--l~----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~ 106 (161)
+ ++ +++|+|.|. |.||+++ |+.+..+-.. ...-...+.||
T Consensus 163 ~K~~dG~~~~~~v~~D~~~f~~kh~v~~i~iGiA~~~k~imsas~dt~i~lw~lk-Gq~L~~idtn---q~~n~~aavSP 238 (420)
T KOG2096|consen 163 VKKTDGSGSHHFVHIDNLEFERKHQVDIINIGIAGNAKYIMSASLDTKICLWDLK-GQLLQSIDTN---QSSNYDAAVSP 238 (420)
T ss_pred eecccCCCCcccccccccccchhcccceEEEeecCCceEEEEecCCCcEEEEecC-Cceeeeeccc---cccccceeeCC
Confidence 1 11 899999999 9999997 6655332111 11123456799
Q ss_pred CeEEEEecCCCCeEEEEecCC---C-----CeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 107 SLVAVVSLSSPRKLTVCHFKR---G-----SEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 107 ~~~~~~s~~~d~~i~iWD~~~---~-----~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+|..+++++-.-.|++|.+-= | +.+.+|+ |.+.|++.+||++ +++.|-+|
T Consensus 239 ~GRFia~~gFTpDVkVwE~~f~kdG~fqev~rvf~LkGH~saV~~~aFsn~S~r~vtvSkD 299 (420)
T KOG2096|consen 239 DGRFIAVSGFTPDVKVWEPIFTKDGTFQEVKRVFSLKGHQSAVLAAAFSNSSTRAVTVSKD 299 (420)
T ss_pred CCcEEEEecCCCCceEEEEEeccCcchhhhhhhheeccchhheeeeeeCCCcceeEEEecC
Confidence 999888765555699998532 2 2234454 6789999999997 77777665
|
|
| >KOG2048|consensus | Back alignment and domain information |
|---|
Probab=99.20 E-value=7.5e-10 Score=94.61 Aligned_cols=149 Identities=21% Similarity=0.215 Sum_probs=108.1
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee--eeeccCccceeee------eEEEecCC
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT--MIPAHDSPLAALA------SLSVGTKS 73 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~--~l~~H~~~V~~l~------~lasgs~d 73 (161)
|+++.+ + ++...+-+++.+|.+..++.+.. ||.+...+...++..+ .|.-.++.|-+++ .++.|+.|
T Consensus 101 k~~~~~-d--~~gg~IWsiai~p~~~~l~Igcd--dGvl~~~s~~p~~I~~~r~l~rq~sRvLslsw~~~~~~i~~Gs~D 175 (691)
T KOG2048|consen 101 KQKYNI-D--SNGGAIWSIAINPENTILAIGCD--DGVLYDFSIGPDKITYKRSLMRQKSRVLSLSWNPTGTKIAGGSID 175 (691)
T ss_pred ceeEEe-c--CCCcceeEEEeCCccceEEeecC--CceEEEEecCCceEEEEeecccccceEEEEEecCCccEEEecccC
Confidence 455555 3 34445778888999889998665 9988888887776443 3455678888888 59999999
Q ss_pred c-eEEEEeCCcCceeeEEee-----cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEEC
Q psy505 74 G-YRLFSLNSIDTLEQIYEN-----SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLN 146 (161)
Q Consensus 74 g-iriwd~~~~~~~~~~~~~-----~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~ 146 (161)
| ||+||+.++..+.....+ ...+.-+-++.|=.++. ++||++-++|+.||...|.+++.++ +..-|++++.+
T Consensus 176 g~Iriwd~~~~~t~~~~~~~~d~l~k~~~~iVWSv~~Lrd~t-I~sgDS~G~V~FWd~~~gTLiqS~~~h~adVl~Lav~ 254 (691)
T KOG2048|consen 176 GVIRIWDVKSGQTLHIITMQLDRLSKREPTIVWSVLFLRDST-IASGDSAGTVTFWDSIFGTLIQSHSCHDADVLALAVA 254 (691)
T ss_pred ceEEEEEcCCCceEEEeeecccccccCCceEEEEEEEeecCc-EEEecCCceEEEEcccCcchhhhhhhhhcceeEEEEc
Confidence 9 999999988755311111 11234455777765554 6777778999999999999999887 67899999997
Q ss_pred Cc--EEEEEecc
Q psy505 147 RK--KEEEEDEE 156 (161)
Q Consensus 147 ~~--~~vv~~~~ 156 (161)
++ +++.+.-|
T Consensus 255 ~~~d~vfsaGvd 266 (691)
T KOG2048|consen 255 DNEDRVFSAGVD 266 (691)
T ss_pred CCCCeEEEccCC
Confidence 75 66665544
|
|
| >KOG0772|consensus | Back alignment and domain information |
|---|
Probab=99.19 E-value=1.3e-10 Score=97.08 Aligned_cols=130 Identities=12% Similarity=0.093 Sum_probs=95.4
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCC--cee-eeeccCc--cceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKT-MIPAHDS--PLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~-~l~~H~~--~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
+..-+++|||..+|++.. ||.|.+||..+.. +.. .=+||.. .|+||+ +|+|=+.|+ .|+||++.-+
T Consensus 320 ~tsC~~nrdg~~iAagc~--DGSIQ~W~~~~~~v~p~~~vk~AH~~g~~Itsi~FS~dg~~LlSRg~D~tLKvWDLrq~k 397 (641)
T KOG0772|consen 320 VTSCAWNRDGKLIAAGCL--DGSIQIWDKGSRTVRPVMKVKDAHLPGQDITSISFSYDGNYLLSRGFDDTLKVWDLRQFK 397 (641)
T ss_pred ceeeecCCCcchhhhccc--CCceeeeecCCcccccceEeeeccCCCCceeEEEeccccchhhhccCCCceeeeeccccc
Confidence 334456889999887655 9999999986543 222 3369988 999999 899999999 9999998754
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEec------CCCCeEEEEecCCCCeEEEEEec-CceEEEEECCc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSL------SSPRKLTVCHFKRGSEICNYSFS-NTILAVKLNRK 148 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~------~~d~~i~iWD~~~~~~i~~l~~~-~~V~~v~~~~~ 148 (161)
.....+.|--....-...+|||+...+++| ...+++.++|..+=..+..+.++ ..|..+.|+|.
T Consensus 398 kpL~~~tgL~t~~~~tdc~FSPd~kli~TGtS~~~~~~~g~L~f~d~~t~d~v~ki~i~~aSvv~~~Whpk 468 (641)
T KOG0772|consen 398 KPLNVRTGLPTPFPGTDCCFSPDDKLILTGTSAPNGMTAGTLFFFDRMTLDTVYKIDISTASVVRCLWHPK 468 (641)
T ss_pred cchhhhcCCCccCCCCccccCCCceEEEecccccCCCCCceEEEEeccceeeEEEecCCCceEEEEeecch
Confidence 332344443222223456799988887776 23457999999998888888774 67889999996
|
|
| >KOG1188|consensus | Back alignment and domain information |
|---|
Probab=99.18 E-value=3.4e-10 Score=90.38 Aligned_cols=121 Identities=18% Similarity=0.210 Sum_probs=84.1
Q ss_pred ceEEEEcCCCCcceEEEEEcCCCCce--eeeeccC-ccceeee------eEEEecCC----c-eEEEEeCCcCc-eeeEE
Q psy505 26 NCYLAYPGSNSIGEVQIFDADNLHAK--TMIPAHD-SPLAALA------SLSVGTKS----G-YRLFSLNSIDT-LEQIY 90 (161)
Q Consensus 26 ~~~la~~g~~~dg~v~iWd~~~~~~~--~~l~~H~-~~V~~l~------~lasgs~d----g-iriwd~~~~~~-~~~~~ 90 (161)
+...+.+++ .||+||+||+++.... ..+.+|. .+-.|+. .+++|++. - +.+||+|..+. +..+.
T Consensus 83 s~h~v~s~s-sDG~Vr~wD~Rs~~e~a~~~~~~~~~~~f~~ld~nck~~ii~~GtE~~~s~A~v~lwDvR~~qq~l~~~~ 161 (376)
T KOG1188|consen 83 SPHGVISCS-SDGTVRLWDIRSQAESARISWTQQSGTPFICLDLNCKKNIIACGTELTRSDASVVLWDVRSEQQLLRQLN 161 (376)
T ss_pred CCCeeEEec-cCCeEEEEEeecchhhhheeccCCCCCcceEeeccCcCCeEEeccccccCceEEEEEEeccccchhhhhh
Confidence 333444444 2999999999987644 4455666 5667777 78888863 3 99999998765 55556
Q ss_pred eecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCC----eEEEEEecCceEEEEECCcE
Q psy505 91 ENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGS----EICNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 91 ~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~----~i~~l~~~~~V~~v~~~~~~ 149 (161)
..|.++ |.++.|.| |--.++|||-|+-|.|+|++... ++..+.+.+.|-.+.|..++
T Consensus 162 eSH~DD--VT~lrFHP~~pnlLlSGSvDGLvnlfD~~~d~EeDaL~~viN~~sSI~~igw~~~~ 223 (376)
T KOG1188|consen 162 ESHNDD--VTQLRFHPSDPNLLLSGSVDGLVNLFDTKKDNEEDALLHVINHGSSIHLIGWLSKK 223 (376)
T ss_pred hhccCc--ceeEEecCCCCCeEEeecccceEEeeecCCCcchhhHHHhhcccceeeeeeeecCC
Confidence 677766 55666775 22346778889999999998653 23344566789999997653
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.2e-10 Score=90.42 Aligned_cols=95 Identities=17% Similarity=0.301 Sum_probs=77.4
Q ss_pred eEEEEcCCCCcceEEEEEcCCC----------CceeeeeccCccceeee-------------------------------
Q psy505 27 CYLAYPGSNSIGEVQIFDADNL----------HAKTMIPAHDSPLAALA------------------------------- 65 (161)
Q Consensus 27 ~~la~~g~~~dg~v~iWd~~~~----------~~~~~l~~H~~~V~~l~------------------------------- 65 (161)
..++.+|. ++|+|.+||+.++ +.+.....|+++|.++.
T Consensus 165 ~~lllaGy-Esghvv~wd~S~~~~~~~~~~~~kv~~~~ash~qpvlsldyas~~~rGisgga~dkl~~~Sl~~s~gslq~ 243 (323)
T KOG0322|consen 165 TFLLLAGY-ESGHVVIWDLSTGDKIIQLPQSSKVESPNASHKQPVLSLDYASSCDRGISGGADDKLVMYSLNHSTGSLQI 243 (323)
T ss_pred eEEEEEec-cCCeEEEEEccCCceeeccccccccccchhhccCcceeeeechhhcCCcCCCccccceeeeeccccCcccc
Confidence 34455566 5999999999998 34444567888886554
Q ss_pred ---------------------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEE
Q psy505 66 ---------------------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVC 123 (161)
Q Consensus 66 ---------------------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iW 123 (161)
.+|+++.|| ||||+.++..++. ++..|.. .|.+++|+|+.-.+++++.|.+|.+|
T Consensus 244 ~~e~~lknpGv~gvrIRpD~KIlATAGWD~RiRVyswrtl~pLA-VLkyHsa--gvn~vAfspd~~lmAaaskD~rISLW 320 (323)
T KOG0322|consen 244 RKEITLKNPGVSGVRIRPDGKILATAGWDHRIRVYSWRTLNPLA-VLKYHSA--GVNAVAFSPDCELMAAASKDARISLW 320 (323)
T ss_pred cceEEecCCCccceEEccCCcEEeecccCCcEEEEEeccCCchh-hhhhhhc--ceeEEEeCCCCchhhhccCCceEEee
Confidence 899999999 9999999999984 6777864 58899999997778888899999999
Q ss_pred ec
Q psy505 124 HF 125 (161)
Q Consensus 124 D~ 125 (161)
++
T Consensus 321 kL 322 (323)
T KOG0322|consen 321 KL 322 (323)
T ss_pred ec
Confidence 86
|
|
| >KOG4328|consensus | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.8e-10 Score=94.76 Aligned_cols=146 Identities=10% Similarity=0.130 Sum_probs=99.8
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc--eeeeeccCccceeee------eEEEecCCc-eEEEEeC
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA--KTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~--~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~ 81 (161)
.+|...|.++-|+|...-.++++++ ||+||+-|++.... +..+..-.....++. .+..|..=| +.+||.+
T Consensus 231 ~~hs~~Vs~l~F~P~n~s~i~ssSy-DGtiR~~D~~~~i~e~v~s~~~d~~~fs~~d~~~e~~~vl~~~~~G~f~~iD~R 309 (498)
T KOG4328|consen 231 TPHSGPVSGLKFSPANTSQIYSSSY-DGTIRLQDFEGNISEEVLSLDTDNIWFSSLDFSAESRSVLFGDNVGNFNVIDLR 309 (498)
T ss_pred ccCCccccceEecCCChhheeeecc-CceeeeeeecchhhHHHhhcCccceeeeeccccCCCccEEEeecccceEEEEee
Confidence 4565667788888865545555565 99999999998643 344432333333443 455566666 9999999
Q ss_pred CcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCC--C---eEEEEEecCceEEEEECCcE---EEE
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRG--S---EICNYSFSNTILAVKLNRKK---EEE 152 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~--~---~i~~l~~~~~V~~v~~~~~~---~vv 152 (161)
++....+.++-|.- .|.+++++| .-..+++++-|++.+|||+++- + .+..+.|+..|.++-|||.. +..
T Consensus 310 ~~~s~~~~~~lh~k--KI~sv~~NP~~p~~laT~s~D~T~kIWD~R~l~~K~sp~lst~~HrrsV~sAyFSPs~gtl~TT 387 (498)
T KOG4328|consen 310 TDGSEYENLRLHKK--KITSVALNPVCPWFLATASLDQTAKIWDLRQLRGKASPFLSTLPHRRSVNSAYFSPSGGTLLTT 387 (498)
T ss_pred cCCccchhhhhhhc--ccceeecCCCCchheeecccCcceeeeehhhhcCCCCcceecccccceeeeeEEcCCCCceEee
Confidence 87653345555653 688999998 4445677778999999999862 2 25667788999999999973 334
Q ss_pred Eecccee
Q psy505 153 EDEEEEK 159 (161)
Q Consensus 153 ~~~~~~~ 159 (161)
+.++.|+
T Consensus 388 ~~D~~IR 394 (498)
T KOG4328|consen 388 CQDNEIR 394 (498)
T ss_pred ccCCceE
Confidence 4455554
|
|
| >KOG1408|consensus | Back alignment and domain information |
|---|
Probab=99.15 E-value=8.9e-10 Score=95.19 Aligned_cols=126 Identities=13% Similarity=0.136 Sum_probs=94.5
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCc---eeeeeccCccceeee-----------------eEEEecCCc-eEE
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA---KTMIPAHDSPLAALA-----------------SLSVGTKSG-YRL 77 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~---~~~l~~H~~~V~~l~-----------------~lasgs~dg-iri 77 (161)
++.|+|....+.+-- +|..+.|||++.-+. .+.+--|...||++. +|.++|.|+ ||+
T Consensus 329 A~~Fdet~~klscVY--ndhSlYvWDvrD~~kvgk~~s~lyHS~ciW~Ve~~p~nv~~~~~aclp~~cF~TCSsD~TIRl 406 (1080)
T KOG1408|consen 329 ACQFDETTDKLSCVY--NDHSLYVWDVRDVNKVGKCSSMLYHSACIWDVENLPCNVHSPTAACLPRGCFTTCSSDGTIRL 406 (1080)
T ss_pred EEEecCCCceEEEEE--cCceEEEEeccccccccceeeeeeccceeeeeccccccccCcccccCCccceeEecCCCcEEE
Confidence 777887665665433 389999999987543 355667888888776 899999999 999
Q ss_pred EEeCCcCceeeEEee--------------------c---------------CcceEEEEEeecCCeEEEEecCCCCeEEE
Q psy505 78 FSLNSIDTLEQIYEN--------------------S---------------QEDVCIVERLFSSSLVAVVSLSSPRKLTV 122 (161)
Q Consensus 78 wd~~~~~~~~~~~~~--------------------~---------------~~~~~v~~~~fs~~~~~~~s~~~d~~i~i 122 (161)
||++.+..- .+++. | .+.+.+.+++.||++..++||+.-+.|+|
T Consensus 407 W~l~~ctnn-~vyrRNils~~l~ki~y~d~~~q~~~d~~~~~fdka~~s~~d~r~G~R~~~vSp~gqhLAsGDr~GnlrV 485 (1080)
T KOG1408|consen 407 WDLAFCTNN-QVYRRNILSANLSKIPYEDSTQQIMHDASAGIFDKALVSTCDSRFGFRALAVSPDGQHLASGDRGGNLRV 485 (1080)
T ss_pred eeccccccc-ceeecccchhhhhcCccccCchhhhhhccCCcccccchhhcCcccceEEEEECCCcceecccCccCceEE
Confidence 999753211 11110 0 12356788999999999999987889999
Q ss_pred EecCCCCeEEEEE-ecCceEEEEECC
Q psy505 123 CHFKRGSEICNYS-FSNTILAVKLNR 147 (161)
Q Consensus 123 WD~~~~~~i~~l~-~~~~V~~v~~~~ 147 (161)
+|+..-+.++.+. |.+.|+++.|+.
T Consensus 486 y~Lq~l~~~~~~eAHesEilcLeyS~ 511 (1080)
T KOG1408|consen 486 YDLQELEYTCFMEAHESEILCLEYSF 511 (1080)
T ss_pred EEehhhhhhhheecccceeEEEeecC
Confidence 9999888777776 778999999854
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.14 E-value=8.8e-11 Score=104.77 Aligned_cols=138 Identities=14% Similarity=0.138 Sum_probs=98.5
Q ss_pred eEEeecCCCceE---EEEcCCCCcceEEEEEcCCC------CceeeeeccCccceeee-------eEEEecCCc-eEEEE
Q psy505 17 ICCLCVNSDNCY---LAYPGSNSIGEVQIFDADNL------HAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 17 v~~~~~~~d~~~---la~~g~~~dg~v~iWd~~~~------~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd 79 (161)
-..|++.+.|.. |+++|. +||.|-+||...- ..+.+..-|+++|.++. +||+|++|| |-|||
T Consensus 67 F~kL~W~~~g~~~~GlIaGG~-edG~I~ly~p~~~~~~~~~~~la~~~~h~G~V~gLDfN~~q~nlLASGa~~geI~iWD 145 (1049)
T KOG0307|consen 67 FNKLAWGSYGSHSHGLIAGGL-EDGNIVLYDPASIIANASEEVLATKSKHTGPVLGLDFNPFQGNLLASGADDGEILIWD 145 (1049)
T ss_pred ceeeeecccCCCccceeeccc-cCCceEEecchhhccCcchHHHhhhcccCCceeeeeccccCCceeeccCCCCcEEEec
Confidence 345666555544 344455 4999999998762 24567789999999998 999999999 99999
Q ss_pred eCCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEEEecC---ceEEEEECCc---EEEE
Q psy505 80 LNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNYSFSN---TILAVKLNRK---KEEE 152 (161)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~---~V~~v~~~~~---~~vv 152 (161)
+..-+.- ..+......-.|.+++|+. ....++|++.++.+.|||++..+.+-.++... .+..++|+|+ .+++
T Consensus 146 lnn~~tP-~~~~~~~~~~eI~~lsWNrkvqhILAS~s~sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~ 224 (1049)
T KOG0307|consen 146 LNKPETP-FTPGSQAPPSEIKCLSWNRKVSHILASGSPSGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLV 224 (1049)
T ss_pred cCCcCCC-CCCCCCCCcccceEeccchhhhHHhhccCCCCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeee
Confidence 9652211 1111111122466777874 34457788888899999999999888887543 3888999997 7888
Q ss_pred Eecc
Q psy505 153 EDEE 156 (161)
Q Consensus 153 ~~~~ 156 (161)
+.++
T Consensus 225 As~d 228 (1049)
T KOG0307|consen 225 ASGD 228 (1049)
T ss_pred ecCC
Confidence 8776
|
|
| >KOG1445|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=4.1e-10 Score=96.25 Aligned_cols=136 Identities=19% Similarity=0.304 Sum_probs=94.6
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC-CCcee-eeec--cCccceeee-------eEEEecCCc-eEEEE
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-LHAKT-MIPA--HDSPLAALA-------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~~~~~-~l~~--H~~~V~~l~-------~lasgs~dg-iriwd 79 (161)
....|.|+ +...+|.+-...-|.|-|++++. |+..- .+.+ ....|.++. .||.|++|| |+||.
T Consensus 582 gEsnGfca-----n~~rvAVPL~g~gG~iai~el~~PGrLPDgv~p~l~Ngt~vtDl~WdPFD~~rLAVa~ddg~i~lWr 656 (1012)
T KOG1445|consen 582 GESNGFCA-----NNKRVAVPLAGSGGVIAIYELNEPGRLPDGVMPGLFNGTLVTDLHWDPFDDERLAVATDDGQINLWR 656 (1012)
T ss_pred CccCceee-----ccceEEEEecCCCceEEEEEcCCCCCCCcccccccccCceeeecccCCCChHHeeecccCceEEEEE
Confidence 34456654 44556554321258999999975 33221 1111 234566776 899999999 99999
Q ss_pred eCCcCc------eeeEEeecCcceEEEEEeecC---CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc-
Q psy505 80 LNSIDT------LEQIYENSQEDVCIVERLFSS---SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK- 148 (161)
Q Consensus 80 ~~~~~~------~~~~~~~~~~~~~v~~~~fs~---~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~- 148 (161)
+.++.. -...+.+|.. .|.++.|+| |-++. ++-|-+|+|||+++++..+.|. |.++|.+++|||+
T Consensus 657 ~~a~gl~e~~~tPe~~lt~h~e--KI~slRfHPLAadvLa~--asyd~Ti~lWDl~~~~~~~~l~gHtdqIf~~AWSpdG 732 (1012)
T KOG1445|consen 657 LTANGLPENEMTPEKILTIHGE--KITSLRFHPLAADVLAV--ASYDSTIELWDLANAKLYSRLVGHTDQIFGIAWSPDG 732 (1012)
T ss_pred eccCCCCcccCCcceeeecccc--eEEEEEecchhhhHhhh--hhccceeeeeehhhhhhhheeccCcCceeEEEECCCC
Confidence 876532 1235566654 578889997 54444 4467899999999999888886 7899999999998
Q ss_pred -EEEEEecc
Q psy505 149 -KEEEEDEE 156 (161)
Q Consensus 149 -~~vv~~~~ 156 (161)
+++.|++|
T Consensus 733 r~~AtVcKD 741 (1012)
T KOG1445|consen 733 RRIATVCKD 741 (1012)
T ss_pred cceeeeecC
Confidence 67777766
|
|
| >KOG0642|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.4e-09 Score=91.38 Aligned_cols=148 Identities=12% Similarity=0.136 Sum_probs=104.6
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC----------CceeeeeccCccceeee------
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL----------HAKTMIPAHDSPLAALA------ 65 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~----------~~~~~l~~H~~~V~~l~------ 65 (161)
++++|+ ..|.-| |.+++..+++..+-++|. ||+|+.|++... .....|.||++.||.++
T Consensus 335 epi~tf-raH~gP--Vl~v~v~~n~~~~ysgg~--Dg~I~~w~~p~n~dp~ds~dp~vl~~~l~Ghtdavw~l~~s~~~~ 409 (577)
T KOG0642|consen 335 EPILTF-RAHEGP--VLCVVVPSNGEHCYSGGI--DGTIRCWNLPPNQDPDDSYDPSVLSGTLLGHTDAVWLLALSSTKD 409 (577)
T ss_pred eeeEEE-ecccCc--eEEEEecCCceEEEeecc--CceeeeeccCCCCCcccccCcchhccceeccccceeeeeeccccc
Confidence 678888 676666 777777888888887776 999999965422 13456899999999998
Q ss_pred eEEEecCCc-eEEEEeCCcCceeeEEe---ecCcc---------------------------------------------
Q psy505 66 SLSVGTKSG-YRLFSLNSIDTLEQIYE---NSQED--------------------------------------------- 96 (161)
Q Consensus 66 ~lasgs~dg-iriwd~~~~~~~~~~~~---~~~~~--------------------------------------------- 96 (161)
.|+++|.|| +|+|+.....++ ++. .|.-+
T Consensus 410 ~Llscs~DgTvr~w~~~~~~~~--~f~~~~e~g~Plsvd~~ss~~a~~~~s~~~~~~~~~~~ev~s~~~~~~s~~~~~~~ 487 (577)
T KOG0642|consen 410 RLLSCSSDGTVRLWEPTEESPC--TFGEPKEHGYPLSVDRTSSRPAHSLASFRFGYTSIDDMEVVSDLLIFESSASPGPR 487 (577)
T ss_pred ceeeecCCceEEeeccCCcCcc--ccCCccccCCcceEeeccchhHhhhhhcccccccchhhhhhhheeeccccCCCccc
Confidence 899999999 999998655441 111 01000
Q ss_pred --eEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEecc
Q psy505 97 --VCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 97 --~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~ 156 (161)
..+.-+...|+.-.+.++.+|+.|+++|..+++.+.+.. +...|.++++.|++..+....
T Consensus 488 ~~~~in~vVs~~~~~~~~~~hed~~Ir~~dn~~~~~l~s~~a~~~svtslai~~ng~~l~s~s 550 (577)
T KOG0642|consen 488 RYPQINKVVSHPTADITFTAHEDRSIRFFDNKTGKILHSMVAHKDSVTSLAIDPNGPYLMSGS 550 (577)
T ss_pred ccCccceEEecCCCCeeEecccCCceecccccccccchheeeccceecceeecCCCceEEeec
Confidence 001111122222233445689999999999999998876 789999999999988776543
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=99.10 E-value=1.6e-09 Score=81.74 Aligned_cols=110 Identities=12% Similarity=0.162 Sum_probs=80.5
Q ss_pred eEEeecCCCceEEEEc-CCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecC---Cc-eEEEEeCCcCc
Q psy505 17 ICCLCVNSDNCYLAYP-GSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTK---SG-YRLFSLNSIDT 85 (161)
Q Consensus 17 v~~~~~~~d~~~la~~-g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~---dg-iriwd~~~~~~ 85 (161)
|..++++|+|..+|.. |.. ++.|.+||++ ++.+..+. .++++.+. +|++|+- .| +++||+++.+.
T Consensus 62 I~~~~WsP~g~~favi~g~~-~~~v~lyd~~-~~~i~~~~--~~~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~ 137 (194)
T PF08662_consen 62 IHDVAWSPNGNEFAVIYGSM-PAKVTLYDVK-GKKIFSFG--TQPRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKK 137 (194)
T ss_pred eEEEEECcCCCEEEEEEccC-CcccEEEcCc-ccEeEeec--CCCceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEE
Confidence 8999999999876543 543 7899999997 66767774 56777887 6766653 46 99999987654
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecC------CCCeEEEEecCCCCeEEEEEe
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLS------SPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~------~d~~i~iWD~~~~~~i~~l~~ 136 (161)
+. ..+.. .+..++|||+|..++++. -|+.++||+.. |+++.+..+
T Consensus 138 i~---~~~~~--~~t~~~WsPdGr~~~ta~t~~r~~~dng~~Iw~~~-G~~l~~~~~ 188 (194)
T PF08662_consen 138 IS---TFEHS--DATDVEWSPDGRYLATATTSPRLRVDNGFKIWSFQ-GRLLYKKPF 188 (194)
T ss_pred ee---ccccC--cEEEEEEcCCCCEEEEEEeccceeccccEEEEEec-CeEeEecch
Confidence 42 22221 356789999998888753 48899999985 888776654
|
|
| >KOG0268|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=4.3e-10 Score=90.54 Aligned_cols=134 Identities=11% Similarity=0.136 Sum_probs=98.8
Q ss_pred eeEEeecCCCc-eEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 16 GICCLCVNSDN-CYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~-~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
.+.++.|||-. .+|+++++ |+.|.|+|++++++++.+.- ...-+.++ -|.+|++|. +..||++.-+.-.
T Consensus 189 ti~svkfNpvETsILas~~s--DrsIvLyD~R~~~Pl~KVi~-~mRTN~IswnPeafnF~~a~ED~nlY~~DmR~l~~p~ 265 (433)
T KOG0268|consen 189 SISSVKFNPVETSILASCAS--DRSIVLYDLRQASPLKKVIL-TMRTNTICWNPEAFNFVAANEDHNLYTYDMRNLSRPL 265 (433)
T ss_pred ceeEEecCCCcchheeeecc--CCceEEEecccCCccceeee-eccccceecCccccceeeccccccceehhhhhhcccc
Confidence 46688888855 46666666 99999999999998765421 12223444 788999999 9999997633222
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec---CceEEEEECCc-EEEEEec
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS---NTILAVKLNRK-KEEEEDE 155 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~---~~V~~v~~~~~-~~vv~~~ 155 (161)
..+.+|.+ .+.++.|||.|.-+|||+-|++|+||.+..+.- .+.-|. -.|.+|+||-| +.++...
T Consensus 266 ~v~~dhvs--AV~dVdfsptG~EfvsgsyDksIRIf~~~~~~S-RdiYhtkRMq~V~~Vk~S~Dskyi~SGS 334 (433)
T KOG0268|consen 266 NVHKDHVS--AVMDVDFSPTGQEFVSGSYDKSIRIFPVNHGHS-RDIYHTKRMQHVFCVKYSMDSKYIISGS 334 (433)
T ss_pred hhhcccce--eEEEeccCCCcchhccccccceEEEeecCCCcc-hhhhhHhhhheeeEEEEeccccEEEecC
Confidence 56677764 588999999999999999999999999988763 223232 47999999988 4444433
|
|
| >KOG0307|consensus | Back alignment and domain information |
|---|
Probab=99.10 E-value=2e-10 Score=102.51 Aligned_cols=131 Identities=18% Similarity=0.218 Sum_probs=99.6
Q ss_pred CceeEEeecCCC-ceEEEEcCCCCcceEEEEEcCCCCceeeeeccCcc--ceeee-------eEEEecCC-c---eEEEE
Q psy505 14 PNGICCLCVNSD-NCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP--LAALA-------SLSVGTKS-G---YRLFS 79 (161)
Q Consensus 14 ~~~v~~~~~~~d-~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~--V~~l~-------~lasgs~d-g---iriwd 79 (161)
+.-|.++++|.. ..+||+++. +|.+-|||++..+.+..+.-|... ++.++ .++++|+| + |++||
T Consensus 161 ~~eI~~lsWNrkvqhILAS~s~--sg~~~iWDlr~~~pii~ls~~~~~~~~S~l~WhP~~aTql~~As~dd~~PviqlWD 238 (1049)
T KOG0307|consen 161 PSEIKCLSWNRKVSHILASGSP--SGRAVIWDLRKKKPIIKLSDTPGRMHCSVLAWHPDHATQLLVASGDDSAPVIQLWD 238 (1049)
T ss_pred cccceEeccchhhhHHhhccCC--CCCceeccccCCCcccccccCCCccceeeeeeCCCCceeeeeecCCCCCceeEeec
Confidence 445889999864 445565554 899999999998888777766553 44555 55555543 3 99999
Q ss_pred eCCcCceeeEEeecCcceEEEEEeecCCe-EEEEecCCCCeEEEEecCCCCeEEEEEe-cCceEEEEECCc
Q psy505 80 LNSIDTLEQIYENSQEDVCIVERLFSSSL-VAVVSLSSPRKLTVCHFKRGSEICNYSF-SNTILAVKLNRK 148 (161)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~~fs~~~-~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~ 148 (161)
+|...--.+++++|.. .+++|.|++.. ..++|++.|+.|.+||.++|+.+.++.- .+.+..|.|+|.
T Consensus 239 lR~assP~k~~~~H~~--GilslsWc~~D~~lllSsgkD~~ii~wN~~tgEvl~~~p~~~nW~fdv~w~pr 307 (1049)
T KOG0307|consen 239 LRFASSPLKILEGHQR--GILSLSWCPQDPRLLLSSGKDNRIICWNPNTGEVLGELPAQGNWCFDVQWCPR 307 (1049)
T ss_pred ccccCCchhhhccccc--ceeeeccCCCCchhhhcccCCCCeeEecCCCceEeeecCCCCcceeeeeecCC
Confidence 8764433367788874 48899999855 7778888999999999999999988864 689999999886
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.1e-10 Score=98.43 Aligned_cols=142 Identities=11% Similarity=0.110 Sum_probs=105.3
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG 74 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg 74 (161)
|+.+.++ +. ++...|..++|-|||+.|+.+. +..+.|+|.+.|..+++++||++-|.|++ .||||+.|.
T Consensus 1 m~~~~~~-r~-~~~hci~d~afkPDGsqL~lAA---g~rlliyD~ndG~llqtLKgHKDtVycVAys~dGkrFASG~aDK 75 (1081)
T KOG1538|consen 1 MRAVLTW-RD-KAEHCINDIAFKPDGTQLILAA---GSRLLVYDTSDGTLLQPLKGHKDTVYCVAYAKDGKRFASGSADK 75 (1081)
T ss_pred Cchhhhh-hc-ccccchheeEECCCCceEEEec---CCEEEEEeCCCcccccccccccceEEEEEEccCCceeccCCCce
Confidence 5556666 33 3344788999999998887755 46799999999999999999999999999 999999999
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEE
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEE 153 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~ 153 (161)
+-||+..-... +.-.|++ .|.+|.|+|=...++|++- +.--+|...... +....-...|.++.|+.|+-+.+
T Consensus 76 ~VI~W~~klEG~---LkYSH~D--~IQCMsFNP~~h~LasCsL-sdFglWS~~qK~-V~K~kss~R~~~CsWtnDGqyla 148 (1081)
T KOG1538|consen 76 SVIIWTSKLEGI---LKYSHND--AIQCMSFNPITHQLASCSL-SDFGLWSPEQKS-VSKHKSSSRIICCSWTNDGQYLA 148 (1081)
T ss_pred eEEEecccccce---eeeccCC--eeeEeecCchHHHhhhcch-hhccccChhhhh-HHhhhhheeEEEeeecCCCcEEE
Confidence 99999743221 2223543 5889999996555666643 347789876443 34444567888889988876666
Q ss_pred e
Q psy505 154 D 154 (161)
Q Consensus 154 ~ 154 (161)
+
T Consensus 149 l 149 (1081)
T KOG1538|consen 149 L 149 (1081)
T ss_pred E
Confidence 5
|
|
| >COG2319 FOG: WD40 repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.07 E-value=2.2e-08 Score=78.56 Aligned_cols=138 Identities=16% Similarity=0.279 Sum_probs=98.6
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee-eeeccCcc-ceeee----eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT-MIPAHDSP-LAALA----SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~-~l~~H~~~-V~~l~----~lasgs~dg-iriwd~~~~~~ 85 (161)
+...+..++++|++..++.+++. |+.|++||...+.... .+.+|... +.... ++++++.|+ +++||.+....
T Consensus 197 ~~~~v~~~~~~~~~~~~~~~~~~-d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~ 275 (466)
T COG2319 197 HTDPVSSLAFSPDGGLLIASGSS-DGTIRLWDLSTGKLLRSTLSGHSDSVVSSFSPDGSLLASGSSDGTIRLWDLRSSSS 275 (466)
T ss_pred CCCceEEEEEcCCcceEEEEecC-CCcEEEEECCCCcEEeeecCCCCcceeEeECCCCCEEEEecCCCcEEEeeecCCCc
Confidence 45568888888998744444343 9999999999888887 69999887 33233 778999999 99999987654
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE---ecCceEEEEECCc--EEEEE
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS---FSNTILAVKLNRK--KEEEE 153 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~---~~~~V~~v~~~~~--~~vv~ 153 (161)
....+.+|.. .+.++.|+|+...+++++.|+.+++||..+........ +...|..+.|+++ .+.+.
T Consensus 276 ~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 346 (466)
T COG2319 276 LLRTLSGHSS--SVLSVAFSPDGKLLASGSSDGTVRLWDLETGKLLSSLTLKGHEGPVSSLSFSPDGSLLVSG 346 (466)
T ss_pred EEEEEecCCc--cEEEEEECCCCCEEEEeeCCCcEEEEEcCCCceEEEeeecccCCceEEEEECCCCCEEEEe
Confidence 1123345543 46677899855555556667889999999888776654 3456899999433 44444
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.9e-10 Score=94.92 Aligned_cols=135 Identities=13% Similarity=0.112 Sum_probs=110.4
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
.+|..+-|=|.--+|++++. .|.++.-|+.+|+.+..|..-.+.+..++ .+-.|-..| |-+|...+.+++.
T Consensus 210 ~~v~rLeFLPyHfLL~~~~~--~G~L~Y~DVS~GklVa~~~t~~G~~~vm~qNP~NaVih~GhsnGtVSlWSP~skePLv 287 (545)
T KOG1272|consen 210 IRVARLEFLPYHFLLVAASE--AGFLKYQDVSTGKLVASIRTGAGRTDVMKQNPYNAVIHLGHSNGTVSLWSPNSKEPLV 287 (545)
T ss_pred Cchhhhcccchhheeeeccc--CCceEEEeechhhhhHHHHccCCccchhhcCCccceEEEcCCCceEEecCCCCcchHH
Confidence 45667777777667777665 79999999999999999987777777776 677899999 9999999888887
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEe
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~ 154 (161)
+++. |.++ |.++++.++|.++++.+.|+.++|||++.-..+.++.-+-+...+.||..++.++.
T Consensus 288 KiLc-H~g~--V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~~tp~~a~~ls~SqkglLA~~ 351 (545)
T KOG1272|consen 288 KILC-HRGP--VSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTYRTPHPASNLSLSQKGLLALS 351 (545)
T ss_pred HHHh-cCCC--cceEEECCCCcEEeecccccceeEeeeccccccceeecCCCccccccccccceeee
Confidence 6654 4443 77889999999999999999999999998776666655678888999998776654
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=99.06 E-value=1.3e-09 Score=92.05 Aligned_cols=135 Identities=17% Similarity=0.208 Sum_probs=104.8
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCc------c-----ceeee------eEEEecCCc-eEE
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS------P-----LAALA------SLSVGTKSG-YRL 77 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~------~-----V~~l~------~lasgs~dg-iri 77 (161)
++.++..++-..+||+++. ||.|..||.++++.+.++.+-.+ . |+++. -+++|+..| +-|
T Consensus 177 ~lN~v~in~~hgLla~Gt~--~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal~F~d~gL~~aVGts~G~v~i 254 (703)
T KOG2321|consen 177 ELNVVSINEEHGLLACGTE--DGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTALKFRDDGLHVAVGTSTGSVLI 254 (703)
T ss_pred cceeeeecCccceEEeccc--CceEEEecchhhhhheeeecccccCCCccccccCcceEEEecCCceeEEeeccCCcEEE
Confidence 4556666776667887665 99999999999988777764333 2 66776 899999999 999
Q ss_pred EEeCCcCceeeEEeecCcceEEEEEeecCC--eEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc-EEEEEe
Q psy505 78 FSLNSIDTLEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK-KEEEED 154 (161)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~v~~~~fs~~--~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~-~~vv~~ 154 (161)
||+++.+++ +...|.....+..+.|-++ .-.++|. +.+.++|||-.+|+....+.....+..+.+=|+ +++..-
T Consensus 255 yDLRa~~pl--~~kdh~~e~pi~~l~~~~~~~q~~v~S~-Dk~~~kiWd~~~Gk~~asiEpt~~lND~C~~p~sGm~f~A 331 (703)
T KOG2321|consen 255 YDLRASKPL--LVKDHGYELPIKKLDWQDTDQQNKVVSM-DKRILKIWDECTGKPMASIEPTSDLNDFCFVPGSGMFFTA 331 (703)
T ss_pred EEcccCCce--eecccCCccceeeecccccCCCceEEec-chHHhhhcccccCCceeeccccCCcCceeeecCCceEEEe
Confidence 999998886 4556777778889999764 5567776 446899999999999999988878998888776 444433
Q ss_pred c
Q psy505 155 E 155 (161)
Q Consensus 155 ~ 155 (161)
.
T Consensus 332 n 332 (703)
T KOG2321|consen 332 N 332 (703)
T ss_pred c
Confidence 3
|
|
| >KOG1539|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=8e-09 Score=90.27 Aligned_cols=115 Identities=11% Similarity=0.122 Sum_probs=92.6
Q ss_pred cceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV 109 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~ 109 (161)
+|.++|||+++++.+++++++.+.|+++. .+|.|..+| |-|++++.++.+. .++...+ .|.+++|+.||.
T Consensus 181 ~G~lql~Nvrt~K~v~~f~~~~s~IT~ieqsPaLDVVaiG~~~G~ViifNlK~dkil~-sFk~d~g--~VtslSFrtDG~ 257 (910)
T KOG1539|consen 181 QGRLQLWNVRTGKVVYTFQEFFSRITAIEQSPALDVVAIGLENGTVIIFNLKFDKILM-SFKQDWG--RVTSLSFRTDGN 257 (910)
T ss_pred CCcEEEEEeccCcEEEEecccccceeEeccCCcceEEEEeccCceEEEEEcccCcEEE-EEEcccc--ceeEEEeccCCC
Confidence 89999999999999999999999999888 999999999 9999999987663 4443223 588899998775
Q ss_pred E-EEecCCCCeEEEEecCCCCeEEEEE--ecCceEEEEECCcEEEEEe
Q psy505 110 A-VVSLSSPRKLTVCHFKRGSEICNYS--FSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 110 ~-~~s~~~d~~i~iWD~~~~~~i~~l~--~~~~V~~v~~~~~~~vv~~ 154 (161)
. ++++...+.+-+||++..+.+..+. |.+.|....|-|..-|++.
T Consensus 258 p~las~~~~G~m~~wDLe~kkl~~v~~nah~~sv~~~~fl~~epVl~t 305 (910)
T KOG1539|consen 258 PLLASGRSNGDMAFWDLEKKKLINVTRNAHYGSVTGATFLPGEPVLVT 305 (910)
T ss_pred eeEEeccCCceEEEEEcCCCeeeeeeeccccCCcccceecCCCceEee
Confidence 4 4555555789999999988876654 5577888888776555544
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=99.01 E-value=4.6e-09 Score=90.21 Aligned_cols=129 Identities=11% Similarity=0.121 Sum_probs=93.9
Q ss_pred CCCceEEEEcCCCCcceEEEEEcCCC--CceeeeeccCccceeee---------eEEEecCCc-eEEEEeCCcC------
Q psy505 23 NSDNCYLAYPGSNSIGEVQIFDADNL--HAKTMIPAHDSPLAALA---------SLSVGTKSG-YRLFSLNSID------ 84 (161)
Q Consensus 23 ~~d~~~la~~g~~~dg~v~iWd~~~~--~~~~~l~~H~~~V~~l~---------~lasgs~dg-iriwd~~~~~------ 84 (161)
+++--.+|.+|+ +..|.|+--.+. +.+..+.||++.|++++ +|||||+|. ||||.+.-+.
T Consensus 156 ~~~~~lla~Ggs--~~~v~~~s~~~d~f~~v~el~GH~DWIrsl~f~~~~~~~~~laS~SQD~yIRiW~i~~~~~~~~~~ 233 (764)
T KOG1063|consen 156 NNKTFLLACGGS--KFVVDLYSSSADSFARVAELEGHTDWIRSLAFARLGGDDLLLASSSQDRYIRIWRIVLGDDEDSNE 233 (764)
T ss_pred cCCcEEEEecCc--ceEEEEeccCCcceeEEEEeeccchhhhhhhhhccCCCcEEEEecCCceEEEEEEEEecCCccccc
Confidence 444445566554 778888765533 46788999999999998 999999999 9999975443
Q ss_pred --------------cee----------eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC-------eEEE
Q psy505 85 --------------TLE----------QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS-------EICN 133 (161)
Q Consensus 85 --------------~~~----------~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~-------~i~~ 133 (161)
... .++.||++ +|.++.|+|.++-+.|++.|+++.||-..+.. ++.+
T Consensus 234 ~e~~~t~~~~~~~f~~l~~i~~~is~eall~GHeD--WV~sv~W~p~~~~LLSASaDksmiiW~pd~~tGiWv~~vRlGe 311 (764)
T KOG1063|consen 234 REDSLTTLSNLPVFMILEEIQYRISFEALLMGHED--WVYSVWWHPEGLDLLSASADKSMIIWKPDENTGIWVDVVRLGE 311 (764)
T ss_pred cccccccccCCceeeeeeeEEEEEehhhhhcCccc--ceEEEEEccchhhheecccCcceEEEecCCccceEEEEEEeec
Confidence 111 12236754 78899999999889999999999999766552 2233
Q ss_pred EEe-cCceEEEEECCcEEEEEec
Q psy505 134 YSF-SNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 134 l~~-~~~V~~v~~~~~~~vv~~~ 155 (161)
+.+ ...-++..|+|+...++..
T Consensus 312 ~gg~a~GF~g~lw~~n~~~ii~~ 334 (764)
T KOG1063|consen 312 VGGSAGGFWGGLWSPNSNVIIAH 334 (764)
T ss_pred ccccccceeeEEEcCCCCEEEEe
Confidence 333 3468999999998666554
|
|
| >KOG1009|consensus | Back alignment and domain information |
|---|
Probab=98.97 E-value=3.9e-09 Score=85.92 Aligned_cols=144 Identities=17% Similarity=0.141 Sum_probs=106.6
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcC--------C-----C---CceeeeeccCccceeee------eEEE
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDAD--------N-----L---HAKTMIPAHDSPLAALA------SLSV 69 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~--------~-----~---~~~~~l~~H~~~V~~l~------~las 69 (161)
.|...|..+-|+|+|..||+++. +|.|.+|-.. + . .....+.+|...|..++ ++++
T Consensus 63 ~H~~aVN~vRf~p~gelLASg~D--~g~v~lWk~~~~~~~~~d~e~~~~ke~w~v~k~lr~h~~diydL~Ws~d~~~l~s 140 (434)
T KOG1009|consen 63 RHTRAVNVVRFSPDGELLASGGD--GGEVFLWKQGDVRIFDADTEADLNKEKWVVKKVLRGHRDDIYDLAWSPDSNFLVS 140 (434)
T ss_pred CCcceeEEEEEcCCcCeeeecCC--CceEEEEEecCcCCccccchhhhCccceEEEEEecccccchhhhhccCCCceeee
Confidence 45567888889999999999776 8999999876 2 1 12456789999999999 8999
Q ss_pred ecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-------------
Q psy505 70 GTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS------------- 135 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~------------- 135 (161)
|+.|. +++||+..|..+ ..+..|.+ ++..+++.|-..++++-+.|+..++.+....+.++...
T Consensus 141 ~s~dns~~l~Dv~~G~l~-~~~~dh~~--yvqgvawDpl~qyv~s~s~dr~~~~~~~~~~~~~~~~~~~~m~~~~~~~~e 217 (434)
T KOG1009|consen 141 GSVDNSVRLWDVHAGQLL-AILDDHEH--YVQGVAWDPLNQYVASKSSDRHPEGFSAKLKQVIKRHGLDIMPAKAFNERE 217 (434)
T ss_pred eeccceEEEEEeccceeE-eecccccc--ccceeecchhhhhhhhhccCcccceeeeeeeeeeeeeeeeEeeecccCCCC
Confidence 99999 999999998754 45556653 67788899987888887778866666665443332211
Q ss_pred -------ec----CceEEEEECCcEEEEEeccceee
Q psy505 136 -------FS----NTILAVKLNRKKEEEEDEEEEKK 160 (161)
Q Consensus 136 -------~~----~~V~~v~~~~~~~vv~~~~~~~~ 160 (161)
|. +--..+.|+|++..+++...+.|
T Consensus 218 ~~s~rLfhDeTlksFFrRlsfTPdG~llvtPag~~~ 253 (434)
T KOG1009|consen 218 GKSTRLFHDETLKSFFRRLSFTPDGSLLVTPAGLFK 253 (434)
T ss_pred cceeeeeecCchhhhhhhcccCCCCcEEEcccceee
Confidence 11 23455788899888888776554
|
|
| >KOG1063|consensus | Back alignment and domain information |
|---|
Probab=98.92 E-value=1e-08 Score=88.12 Aligned_cols=133 Identities=14% Similarity=0.117 Sum_probs=103.6
Q ss_pred CCceeEEeecCCCceEEEEcCCC---CcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSN---SIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~---~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~ 82 (161)
|-.-|++++.||+|+.+|++.-. +--.|+||+..+-+.++.|++|.--|+-++ +|++.|.|. +.+|....
T Consensus 524 HGyEv~~l~~s~~gnliASaCKS~~~ehAvI~lw~t~~W~~~~~L~~HsLTVT~l~FSpdg~~LLsvsRDRt~sl~~~~~ 603 (764)
T KOG1063|consen 524 HGYEVYALAISPTGNLIASACKSSLKEHAVIRLWNTANWLQVQELEGHSLTVTRLAFSPDGRYLLSVSRDRTVSLYEVQE 603 (764)
T ss_pred CceeEEEEEecCCCCEEeehhhhCCccceEEEEEeccchhhhheecccceEEEEEEECCCCcEEEEeecCceEEeeeeec
Confidence 34458999999999999987531 234699999998888889999999999999 999999999 99999855
Q ss_pred cCceeeE---EeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC--CeEEE---EEecCceEEEEECC
Q psy505 83 IDTLEQI---YENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG--SEICN---YSFSNTILAVKLNR 147 (161)
Q Consensus 83 ~~~~~~~---~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~--~~i~~---l~~~~~V~~v~~~~ 147 (161)
......- ...|+. -|-+-.|+|+..+++++|.|++|++|-.... +.+.. +.|...|.+|++.|
T Consensus 604 ~~~~e~~fa~~k~HtR--IIWdcsW~pde~~FaTaSRDK~VkVW~~~~~~d~~i~~~a~~~~~~aVTAv~~~~ 674 (764)
T KOG1063|consen 604 DIKDEFRFACLKAHTR--IIWDCSWSPDEKYFATASRDKKVKVWEEPDLRDKYISRFACLKFSLAVTAVAYLP 674 (764)
T ss_pred ccchhhhhccccccce--EEEEcccCcccceeEEecCCceEEEEeccCchhhhhhhhchhccCCceeeEEeec
Confidence 4322111 123432 2446679999998999999999999998877 66665 35788999999966
|
|
| >PF08662 eIF2A: Eukaryotic translation initiation factor eIF2A; InterPro: IPR013979 This entry contains beta propellor domains found in eukaryotic translation initiation factors and TolB domain-containing proteins | Back alignment and domain information |
|---|
Probab=98.92 E-value=3.8e-08 Score=74.31 Aligned_cols=125 Identities=14% Similarity=0.157 Sum_probs=81.8
Q ss_pred EEeecCCCceEEEEcCCC--------CcceEEEEEcCCC-Cceeeeec-cCccceeee------e--EEEecCCc-eEEE
Q psy505 18 CCLCVNSDNCYLAYPGSN--------SIGEVQIFDADNL-HAKTMIPA-HDSPLAALA------S--LSVGTKSG-YRLF 78 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~--------~dg~v~iWd~~~~-~~~~~l~~-H~~~V~~l~------~--lasgs~dg-iriw 78 (161)
+.|..+|+|.+|+.-... .-|...||.++.. .....++- ..++|.+++ . +++|..+. ++||
T Consensus 9 ~~~~W~~~G~~l~~~~~~~~~~~~ks~~~~~~l~~~~~~~~~~~~i~l~~~~~I~~~~WsP~g~~favi~g~~~~~v~ly 88 (194)
T PF08662_consen 9 AKLHWQPSGDYLLVKVQTRVDKSGKSYYGEFELFYLNEKNIPVESIELKKEGPIHDVAWSPNGNEFAVIYGSMPAKVTLY 88 (194)
T ss_pred EEEEecccCCEEEEEEEEeeccCcceEEeeEEEEEEecCCCccceeeccCCCceEEEEECcCCCEEEEEEccCCcccEEE
Confidence 456677777766553320 0245667776443 34455543 345799998 3 44565677 9999
Q ss_pred EeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecC---CCCeEEEEecCCCCeEEEEEecCceEEEEECCcE
Q psy505 79 SLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS---SPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 79 d~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~---~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~ 149 (161)
|++ ++++..+ +.. .+..+.|||++..++.++ ..+.|.+||.++.+.+.++.+.. +..++|+|++
T Consensus 89 d~~-~~~i~~~---~~~--~~n~i~wsP~G~~l~~~g~~n~~G~l~~wd~~~~~~i~~~~~~~-~t~~~WsPdG 155 (194)
T PF08662_consen 89 DVK-GKKIFSF---GTQ--PRNTISWSPDGRFLVLAGFGNLNGDLEFWDVRKKKKISTFEHSD-ATDVEWSPDG 155 (194)
T ss_pred cCc-ccEeEee---cCC--CceEEEECCCCCEEEEEEccCCCcEEEEEECCCCEEeeccccCc-EEEEEEcCCC
Confidence 996 4544222 222 255788999886666543 23569999999999988887755 6789999983
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.3e-09 Score=87.43 Aligned_cols=85 Identities=16% Similarity=0.208 Sum_probs=69.9
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
++..|+|+|||.+||+-+. ||.+||+|..+.+.+..++.=-+...||+ |+++|++|- +.||.+..++.
T Consensus 292 ~in~f~FS~DG~~LA~VSq--DGfLRvF~fdt~eLlg~mkSYFGGLLCvcWSPDGKyIvtGGEDDLVtVwSf~erRV--- 366 (636)
T KOG2394|consen 292 SINEFAFSPDGKYLATVSQ--DGFLRIFDFDTQELLGVMKSYFGGLLCVCWSPDGKYIVTGGEDDLVTVWSFEERRV--- 366 (636)
T ss_pred cccceeEcCCCceEEEEec--CceEEEeeccHHHHHHHHHhhccceEEEEEcCCccEEEecCCcceEEEEEeccceE---
Confidence 5678899999999999876 99999999999887776665556788888 999999999 99999977553
Q ss_pred EEeecCcceEEEEEeec
Q psy505 89 IYENSQEDVCIVERLFS 105 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~fs 105 (161)
+-+||.+..+|..++|.
T Consensus 367 VARGqGHkSWVs~VaFD 383 (636)
T KOG2394|consen 367 VARGQGHKSWVSVVAFD 383 (636)
T ss_pred EEeccccccceeeEeec
Confidence 45666656677777887
|
|
| >KOG0321|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=4.2e-09 Score=89.84 Aligned_cols=107 Identities=8% Similarity=0.117 Sum_probs=81.2
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCc------eeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA------KTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~------~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
.|+.+|+-.++.+-+. +||.|.++|.....- ++.+.+|.+.|-++. +|++++-|. +|.||+.+++.
T Consensus 56 sFs~~~n~eHiLavad-E~G~i~l~dt~~~~fr~ee~~lk~~~aH~nAifDl~wapge~~lVsasGDsT~r~Wdvk~s~l 134 (720)
T KOG0321|consen 56 SFSAAPNKEHILAVAD-EDGGIILFDTKSIVFRLEERQLKKPLAHKNAIFDLKWAPGESLLVSASGDSTIRPWDVKTSRL 134 (720)
T ss_pred cccCCCCccceEEEec-CCCceeeecchhhhcchhhhhhcccccccceeEeeccCCCceeEEEccCCceeeeeeecccee
Confidence 5555665544444344 499999999887542 366789999999998 899999999 99999998764
Q ss_pred ee-eEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCC
Q psy505 86 LE-QIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRG 128 (161)
Q Consensus 86 ~~-~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~ 128 (161)
.. .++-||... +-+++|.| |-..+++|+.|+.+.|||.+..
T Consensus 135 ~G~~~~~GH~~S--vkS~cf~~~n~~vF~tGgRDg~illWD~R~n 177 (720)
T KOG0321|consen 135 VGGRLNLGHTGS--VKSECFMPTNPAVFCTGGRDGEILLWDCRCN 177 (720)
T ss_pred ecceeecccccc--cchhhhccCCCcceeeccCCCcEEEEEEecc
Confidence 42 236688754 66788886 5567788889999999998754
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.88 E-value=5.5e-08 Score=86.57 Aligned_cols=128 Identities=11% Similarity=0.188 Sum_probs=96.5
Q ss_pred eecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEee
Q psy505 20 LCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYEN 92 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~ 92 (161)
.-.+++..+++++.. -|.|.+|++..-+....+.||++.+-++. ++++.|+|. +|+|++++++.+....=|
T Consensus 139 ~g~s~~~~~i~~gsv--~~~iivW~~~~dn~p~~l~GHeG~iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fg 216 (967)
T KOG0974|consen 139 IGDSAEELYIASGSV--FGEIIVWKPHEDNKPIRLKGHEGSIFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFG 216 (967)
T ss_pred EeccCcEEEEEeccc--cccEEEEeccccCCcceecccCCceEEEEEccCCcEEEEEecCcceeeeecccccccCccccc
Confidence 334667788887555 79999999985444456999999999888 999999999 999999998755312224
Q ss_pred cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-e-cCceEEEEECCcEEEEEe
Q psy505 93 SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-F-SNTILAVKLNRKKEEEED 154 (161)
Q Consensus 93 ~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~-~~~V~~v~~~~~~~vv~~ 154 (161)
| +..+....|.|+. +++.++|.++++|+.. ++.+..+. | ...++.+...++....++
T Consensus 217 H--saRvw~~~~~~n~--i~t~gedctcrvW~~~-~~~l~~y~~h~g~~iw~~~~~~~~~~~vT 275 (967)
T KOG0974|consen 217 H--SARVWACCFLPNR--IITVGEDCTCRVWGVN-GTQLEVYDEHSGKGIWKIAVPIGVIIKVT 275 (967)
T ss_pred c--cceeEEEEeccce--eEEeccceEEEEEecc-cceehhhhhhhhcceeEEEEcCCceEEEe
Confidence 5 4567888899994 4555689999999764 55566664 4 478999999887555554
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=7.7e-09 Score=87.29 Aligned_cols=133 Identities=12% Similarity=0.131 Sum_probs=93.3
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee--------eEEEecCCc-eEEEEeC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA--------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~--------~lasgs~dg-iriwd~~ 81 (161)
.|.-.|.++.++.||.+||+++. |-.+.|||....++++.+. ||...|-|+. +++||+.|. |++||+.
T Consensus 48 GH~GCVN~LeWn~dG~lL~SGSD--D~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~lfdl~ 125 (758)
T KOG1310|consen 48 GHTGCVNCLEWNADGELLASGSD--DTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKLFDLD 125 (758)
T ss_pred cccceecceeecCCCCEEeecCC--cceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEEEecc
Confidence 45566899999999999998554 8999999999999999985 9999999998 899999999 9999997
Q ss_pred CcC-------c--eeeEEeecCcceEEEEEeecCCe-EEEEecCCCCeEEEEecCCCC-------eEEEEE-e---cCce
Q psy505 82 SID-------T--LEQIYENSQEDVCIVERLFSSSL-VAVVSLSSPRKLTVCHFKRGS-------EICNYS-F---SNTI 140 (161)
Q Consensus 82 ~~~-------~--~~~~~~~~~~~~~v~~~~fs~~~-~~~~s~~~d~~i~iWD~~~~~-------~i~~l~-~---~~~V 140 (161)
..+ + ....+.-|... |-.++-.|++ -.+-|+++|++|+=+|++.-. +...+. + --.-
T Consensus 126 ~~~~~~~d~~~~~~~~~~~cht~r--VKria~~p~~PhtfwsasEDGtirQyDiREph~c~p~~~~~~~l~ny~~~liel 203 (758)
T KOG1310|consen 126 SSKEGGMDHGMEETTRCWSCHTDR--VKRIATAPNGPHTFWSASEDGTIRQYDIREPHVCNPDEDCPSILVNYNPQLIEL 203 (758)
T ss_pred cccccccccCccchhhhhhhhhhh--hhheecCCCCCceEEEecCCcceeeecccCCccCCccccccHHHHHhchhhhee
Confidence 421 0 11223334332 3334444444 344455689999999998621 111111 1 1256
Q ss_pred EEEEECCc
Q psy505 141 LAVKLNRK 148 (161)
Q Consensus 141 ~~v~~~~~ 148 (161)
.++.+||.
T Consensus 204 k~ltisp~ 211 (758)
T KOG1310|consen 204 KCLTISPS 211 (758)
T ss_pred eeeeecCC
Confidence 67888876
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=98.87 E-value=6.1e-08 Score=82.52 Aligned_cols=144 Identities=13% Similarity=0.150 Sum_probs=95.1
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------eEEEecCCceEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------SLSVGTKSGYRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~lasgs~dgiriwd~~~~~ 84 (161)
|..-|.+++.+|.|.+||+++. ||+||||.+.||+|+.+++- .+.|.||+ .||++-...+-|-+..-|+
T Consensus 399 Htg~Vr~iSvdp~G~wlasGsd--DGtvriWEi~TgRcvr~~~~-d~~I~~vaw~P~~~~~vLAvA~~~~~~ivnp~~G~ 475 (733)
T KOG0650|consen 399 HTGLVRSISVDPSGEWLASGSD--DGTVRIWEIATGRCVRTVQF-DSEIRSVAWNPLSDLCVLAVAVGECVLIVNPIFGD 475 (733)
T ss_pred cCCeEEEEEecCCcceeeecCC--CCcEEEEEeecceEEEEEee-cceeEEEEecCCCCceeEEEEecCceEEeCccccc
Confidence 5556889999999999998665 99999999999999988764 34688887 4444433334444432221
Q ss_pred ce---------ee------------EEe---------e----cCcceEEEEEeecC--CeEEEEec-CCCCeEEEEecCC
Q psy505 85 TL---------EQ------------IYE---------N----SQEDVCIVERLFSS--SLVAVVSL-SSPRKLTVCHFKR 127 (161)
Q Consensus 85 ~~---------~~------------~~~---------~----~~~~~~v~~~~fs~--~~~~~~s~-~~d~~i~iWD~~~ 127 (161)
.+ .. .++ + -.....|.+|.|+. +++++|.. +..+.|-|.++.+
T Consensus 476 ~~e~~~t~ell~~~~~~~~p~~~~~~W~~~~~~e~~~~v~~~I~~~k~i~~vtWHrkGDYlatV~~~~~~~~VliHQLSK 555 (733)
T KOG0650|consen 476 RLEVGPTKELLASAPNESEPDAAVVTWSRASLDELEKGVCIVIKHPKSIRQVTWHRKGDYLATVMPDSGNKSVLIHQLSK 555 (733)
T ss_pred hhhhcchhhhhhcCCCccCCcccceeechhhhhhhccceEEEEecCCccceeeeecCCceEEEeccCCCcceEEEEeccc
Confidence 00 00 000 0 00122456777775 56666654 3446799999998
Q ss_pred CCeEEEEE-ecCceEEEEECCc--EEEEEecccee
Q psy505 128 GSEICNYS-FSNTILAVKLNRK--KEEEEDEEEEK 159 (161)
Q Consensus 128 ~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~~~~ 159 (161)
++-..-|. -.+.|.++.|+|. .+.|+++..++
T Consensus 556 ~~sQ~PF~kskG~vq~v~FHPs~p~lfVaTq~~vR 590 (733)
T KOG0650|consen 556 RKSQSPFRKSKGLVQRVKFHPSKPYLFVATQRSVR 590 (733)
T ss_pred ccccCchhhcCCceeEEEecCCCceEEEEeccceE
Confidence 87554453 3579999999997 78888887554
|
|
| >KOG2055|consensus | Back alignment and domain information |
|---|
Probab=98.85 E-value=1.9e-08 Score=83.15 Aligned_cols=139 Identities=12% Similarity=0.148 Sum_probs=103.0
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
.++..|..+|++.+||..|. .|.|.|--..|++.+.+++- ++.|++++ .|.+++.+| |-+||++.-.++
T Consensus 304 ~~~e~FeVShd~~fia~~G~--~G~I~lLhakT~eli~s~Ki-eG~v~~~~fsSdsk~l~~~~~~GeV~v~nl~~~~~~- 379 (514)
T KOG2055|consen 304 KSMERFEVSHDSNFIAIAGN--NGHIHLLHAKTKELITSFKI-EGVVSDFTFSSDSKELLASGGTGEVYVWNLRQNSCL- 379 (514)
T ss_pred chhheeEecCCCCeEEEccc--CceEEeehhhhhhhhheeee-ccEEeeEEEecCCcEEEEEcCCceEEEEecCCcceE-
Confidence 45778888999999999997 79999999999999988875 46677777 444455666 999999876544
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCC------CCeEEEEE-ecCceEEEEECCcEEEEEeccce
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR------GSEICNYS-FSNTILAVKLNRKKEEEEDEEEE 158 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~------~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~~~ 158 (161)
..+... +.+.=.+++-|+|+.++|+|+..+-|-|||-++ -+++..+. ....|.+++||+|.-+++.-.+.
T Consensus 380 ~rf~D~-G~v~gts~~~S~ng~ylA~GS~~GiVNIYd~~s~~~s~~PkPik~~dNLtt~Itsl~Fn~d~qiLAiaS~~ 456 (514)
T KOG2055|consen 380 HRFVDD-GSVHGTSLCISLNGSYLATGSDSGIVNIYDGNSCFASTNPKPIKTVDNLTTAITSLQFNHDAQILAIASRV 456 (514)
T ss_pred EEEeec-CccceeeeeecCCCceEEeccCcceEEEeccchhhccCCCCchhhhhhhheeeeeeeeCcchhhhhhhhhc
Confidence 233322 244445677788999999999989999999553 23444443 45789999999997776665443
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=98.83 E-value=5.6e-08 Score=87.17 Aligned_cols=129 Identities=16% Similarity=0.246 Sum_probs=94.2
Q ss_pred ceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee-------eEEEecCCc-eEEEEeCCcCc--eeeEEeecC
Q psy505 26 NCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDT--LEQIYENSQ 94 (161)
Q Consensus 26 ~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~--~~~~~~~~~ 94 (161)
..+|.++|. -..|||||+....+++.+. +.+..|++++ +++.|-.|| +|+||.+...+ ....++.|.
T Consensus 1177 ~G~Ll~tGd--~r~IRIWDa~~E~~~~diP~~s~t~vTaLS~~~~~gn~i~AGfaDGsvRvyD~R~a~~ds~v~~~R~h~ 1254 (1387)
T KOG1517|consen 1177 SGHLLVTGD--VRSIRIWDAHKEQVVADIPYGSSTLVTALSADLVHGNIIAAGFADGSVRVYDRRMAPPDSLVCVYREHN 1254 (1387)
T ss_pred CCeEEecCC--eeEEEEEecccceeEeecccCCCccceeecccccCCceEEEeecCCceEEeecccCCccccceeecccC
Confidence 335555565 5899999999888888876 4556777777 899999999 99999876433 345667776
Q ss_pred cceEEEEEeecCCeEE-EEecCCCCeEEEEecCCCCeEEEE---E---ecCceEEEEECCcEEEEEecc
Q psy505 95 EDVCIVERLFSSSLVA-VVSLSSPRKLTVCHFKRGSEICNY---S---FSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 95 ~~~~v~~~~fs~~~~~-~~s~~~d~~i~iWD~~~~~~i~~l---~---~~~~V~~v~~~~~~~vv~~~~ 156 (161)
..-.|+.+.+.++|+. ++|++.++.|++||++.......+ . +.+...++..++..-+++...
T Consensus 1255 ~~~~Iv~~slq~~G~~elvSgs~~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs 1323 (1387)
T KOG1517|consen 1255 DVEPIVHLSLQRQGLGELVSGSQDGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGS 1323 (1387)
T ss_pred CcccceeEEeecCCCcceeeeccCCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecC
Confidence 4434888889987776 999999999999999874222111 1 134588888888766666554
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=98.82 E-value=8.9e-08 Score=78.33 Aligned_cols=133 Identities=11% Similarity=0.153 Sum_probs=95.2
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC------Cceeeee-ccCccceeee------eEEEecCCc-eEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL------HAKTMIP-AHDSPLAALA------SLSVGTKSG-YRLF 78 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~------~~~~~l~-~H~~~V~~l~------~lasgs~dg-iriw 78 (161)
+...|.++-|+.++.+||++|. |..+++|++... +++.... -|.+.|-|++ ++.+|..++ |-+-
T Consensus 55 H~GCiNAlqFS~N~~~L~SGGD--D~~~~~W~~de~~~~k~~KPI~~~~~~H~SNIF~L~F~~~N~~~~SG~~~~~VI~H 132 (609)
T KOG4227|consen 55 HTGCINALQFSHNDRFLASGGD--DMHGRVWNVDELMVRKTPKPIGVMEHPHRSNIFSLEFDLENRFLYSGERWGTVIKH 132 (609)
T ss_pred hccccceeeeccCCeEEeecCC--cceeeeechHHHHhhcCCCCceeccCccccceEEEEEccCCeeEecCCCcceeEee
Confidence 4556889999999999999876 999999998753 3433333 3557899999 889999999 9999
Q ss_pred EeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC-eE---EEEEecCceEEEEECCc
Q psy505 79 SLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS-EI---CNYSFSNTILAVKLNRK 148 (161)
Q Consensus 79 d~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~-~i---~~l~~~~~V~~v~~~~~ 148 (161)
|+++.+.+. ++....+.-.|..|..+|-.-.+++.+.++.|-+||.+..+ .+ +.-.+++....+.|+|.
T Consensus 133 DiEt~qsi~-V~~~~~~~~~VY~m~~~P~DN~~~~~t~~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~ 205 (609)
T KOG4227|consen 133 DIETKQSIY-VANENNNRGDVYHMDQHPTDNTLIVVTRAKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPE 205 (609)
T ss_pred ecccceeee-eecccCcccceeecccCCCCceEEEEecCceEEEEeccCCCCCCceeeecCCCccceeeeecCC
Confidence 999876542 33222211236677778744444444568899999998765 22 22235678999999997
|
|
| >KOG0290|consensus | Back alignment and domain information |
|---|
Probab=98.79 E-value=8.3e-08 Score=75.76 Aligned_cols=142 Identities=13% Similarity=0.124 Sum_probs=97.4
Q ss_pred CCceeEEeecCCCce-EEEEcCCCCcceEEEEEcCCCCceeeeec---cCccceeee-------eEEEecCCc--eEEEE
Q psy505 13 NPNGICCLCVNSDNC-YLAYPGSNSIGEVQIFDADNLHAKTMIPA---HDSPLAALA-------SLSVGTKSG--YRLFS 79 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~-~la~~g~~~dg~v~iWd~~~~~~~~~l~~---H~~~V~~l~-------~lasgs~dg--iriwd 79 (161)
|.+-|+-++|..+|. ..|+.|. ||.||++|++..+--..+-. ...+.--++ ++|+=..|. |.|-|
T Consensus 195 HDKEV~DIaf~~~s~~~FASvga--DGSvRmFDLR~leHSTIIYE~p~~~~pLlRLswnkqDpnymATf~~dS~~V~iLD 272 (364)
T KOG0290|consen 195 HDKEVYDIAFLKGSRDVFASVGA--DGSVRMFDLRSLEHSTIIYEDPSPSTPLLRLSWNKQDPNYMATFAMDSNKVVILD 272 (364)
T ss_pred cCcceeEEEeccCccceEEEecC--CCcEEEEEecccccceEEecCCCCCCcceeeccCcCCchHHhhhhcCCceEEEEE
Confidence 455688999987665 4455554 99999999998754333321 123444444 778777777 99999
Q ss_pred eCCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCC------eEEEEEecCceEEEEEC---CcE
Q psy505 80 LNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGS------EICNYSFSNTILAVKLN---RKK 149 (161)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~------~i~~l~~~~~V~~v~~~---~~~ 149 (161)
++.-......+++|.. .|..++|.| +...++++++|..+-|||+.+-- ++-.+.-...|..++|+ ||.
T Consensus 273 iR~P~tpva~L~~H~a--~VNgIaWaPhS~~hictaGDD~qaliWDl~q~~~~~~~dPilay~a~~EVNqi~Ws~~~~Dw 350 (364)
T KOG0290|consen 273 IRVPCTPVARLRNHQA--SVNGIAWAPHSSSHICTAGDDCQALIWDLQQMPRENGEDPILAYTAGGEVNQIQWSSSQPDW 350 (364)
T ss_pred ecCCCcceehhhcCcc--cccceEecCCCCceeeecCCcceEEEEecccccccCCCCchhhhhccceeeeeeecccCCCE
Confidence 9863322234577865 467788876 44456777789999999997632 12223345789999997 579
Q ss_pred EEEEeccce
Q psy505 150 EEEEDEEEE 158 (161)
Q Consensus 150 ~vv~~~~~~ 158 (161)
+++|..++.
T Consensus 351 iai~~~kkl 359 (364)
T KOG0290|consen 351 IAICFGKKL 359 (364)
T ss_pred EEEEecCee
Confidence 999988764
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=6.3e-07 Score=72.14 Aligned_cols=144 Identities=8% Similarity=-0.001 Sum_probs=84.3
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC-CCc--eeeeeccCccceeee------eEEEec-
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-LHA--KTMIPAHDSPLAALA------SLSVGT- 71 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~~~--~~~l~~H~~~V~~l~------~lasgs- 71 (161)
++++++ ++..++ ..++++||+++|.+++.. ++.|.+|++.. ++. +.... ..+....++ +|.+++
T Consensus 26 ~~~~~~-~~~~~~---~~l~~spd~~~lyv~~~~-~~~i~~~~~~~~g~l~~~~~~~-~~~~p~~i~~~~~g~~l~v~~~ 99 (330)
T PRK11028 26 TLLQVV-DVPGQV---QPMVISPDKRHLYVGVRP-EFRVLSYRIADDGALTFAAESP-LPGSPTHISTDHQGRFLFSASY 99 (330)
T ss_pred eeeeEE-ecCCCC---ccEEECCCCCEEEEEECC-CCcEEEEEECCCCceEEeeeec-CCCCceEEEECCCCCEEEEEEc
Confidence 455666 443443 355778899988666553 89999999973 332 22222 122234454 455444
Q ss_pred CCc-eEEEEeCCcCceee---EEeecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecCCCCeEEE-----EE--ecCc
Q psy505 72 KSG-YRLFSLNSIDTLEQ---IYENSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGSEICN-----YS--FSNT 139 (161)
Q Consensus 72 ~dg-iriwd~~~~~~~~~---~~~~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~~i~~-----l~--~~~~ 139 (161)
.++ +.+||+.+...+.+ ...+.. ....++++|++. .+++...++.|.+||+.+...+.. .. -.+.
T Consensus 100 ~~~~v~v~~~~~~g~~~~~~~~~~~~~---~~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~g~l~~~~~~~~~~~~g~~ 176 (330)
T PRK11028 100 NANCVSVSPLDKDGIPVAPIQIIEGLE---GCHSANIDPDNRTLWVPCLKEDRIRLFTLSDDGHLVAQEPAEVTTVEGAG 176 (330)
T ss_pred CCCeEEEEEECCCCCCCCceeeccCCC---cccEeEeCCCCCEEEEeeCCCCEEEEEEECCCCcccccCCCceecCCCCC
Confidence 356 99999964221111 112221 244567898864 446667788999999987433321 11 2345
Q ss_pred eEEEEECCc--EEEEEe
Q psy505 140 ILAVKLNRK--KEEEED 154 (161)
Q Consensus 140 V~~v~~~~~--~~vv~~ 154 (161)
...++|+|+ .+.|+.
T Consensus 177 p~~~~~~pdg~~lyv~~ 193 (330)
T PRK11028 177 PRHMVFHPNQQYAYCVN 193 (330)
T ss_pred CceEEECCCCCEEEEEe
Confidence 678999998 555554
|
|
| >KOG2394|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=6e-08 Score=81.65 Aligned_cols=79 Identities=14% Similarity=0.214 Sum_probs=64.7
Q ss_pred eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEE-EEecCceEEE
Q psy505 66 SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICN-YSFSNTILAV 143 (161)
Q Consensus 66 ~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~-l~~~~~V~~v 143 (161)
+||+-|.|| .||||..+.+.+. +...--+. ..+++||||+.+++.|++|..|.||.+..++.++. ..|.++|..|
T Consensus 304 ~LA~VSqDGfLRvF~fdt~eLlg-~mkSYFGG--LLCvcWSPDGKyIvtGGEDDLVtVwSf~erRVVARGqGHkSWVs~V 380 (636)
T KOG2394|consen 304 YLATVSQDGFLRIFDFDTQELLG-VMKSYFGG--LLCVCWSPDGKYIVTGGEDDLVTVWSFEERRVVARGQGHKSWVSVV 380 (636)
T ss_pred eEEEEecCceEEEeeccHHHHHH-HHHhhccc--eEEEEEcCCccEEEecCCcceEEEEEeccceEEEeccccccceeeE
Confidence 999999999 9999997754331 21111122 66888999999999999999999999999999987 4589999999
Q ss_pred EECC
Q psy505 144 KLNR 147 (161)
Q Consensus 144 ~~~~ 147 (161)
+|.|
T Consensus 381 aFDp 384 (636)
T KOG2394|consen 381 AFDP 384 (636)
T ss_pred eecc
Confidence 9997
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=98.76 E-value=4.9e-07 Score=75.84 Aligned_cols=144 Identities=8% Similarity=0.102 Sum_probs=103.5
Q ss_pred CceeEEeecCC--CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCceEEEEeCCcC
Q psy505 14 PNGICCLCVNS--DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSGYRLFSLNSID 84 (161)
Q Consensus 14 ~~~v~~~~~~~--d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dgiriwd~~~~~ 84 (161)
..||++++|++ .|.+++..-..++--+-+||.+.+..+......+..|.... ++.+++...+-.|+.+.+.
T Consensus 154 ~~GV~~vaFsk~~~G~~l~~vD~s~~h~lSVWdWqk~~~~~~vk~sne~v~~a~FHPtd~nliit~Gk~H~~Fw~~~~~~ 233 (626)
T KOG2106|consen 154 DRGVTCVAFSKINGGSLLCAVDDSNPHMLSVWDWQKKAKLGPVKTSNEVVFLATFHPTDPNLIITCGKGHLYFWTLRGGS 233 (626)
T ss_pred cccceeeeecccCCCceEEEecCCCccccchhhchhhhccCcceeccceEEEEEeccCCCcEEEEeCCceEEEEEccCCc
Confidence 45899999876 56666655433366789999998877777776666665555 6667766669999998875
Q ss_pred cee--eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEE-EEecCceEEEEECCcEEEEEeccceee
Q psy505 85 TLE--QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICN-YSFSNTILAVKLNRKKEEEEDEEEEKK 160 (161)
Q Consensus 85 ~~~--~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~-l~~~~~V~~v~~~~~~~vv~~~~~~~~ 160 (161)
..+ .++++++. ..|.+|.|.+|+-.+. |++++.|-||+..+.+.... ..|++.|.++.+-+++-.+- .+|=+|
T Consensus 234 l~k~~~~fek~ek-k~Vl~v~F~engdviT-gDS~G~i~Iw~~~~~~~~k~~~aH~ggv~~L~~lr~GtllS-GgKDRk 309 (626)
T KOG2106|consen 234 LVKRQGIFEKREK-KFVLCVTFLENGDVIT-GDSGGNILIWSKGTNRISKQVHAHDGGVFSLCMLRDGTLLS-GGKDRK 309 (626)
T ss_pred eEEEeeccccccc-eEEEEEEEcCCCCEEe-ecCCceEEEEeCCCceEEeEeeecCCceEEEEEecCccEee-cCccce
Confidence 432 24455553 6899999999998655 55678999999987766544 45789999999988866555 444443
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.3e-08 Score=78.67 Aligned_cols=119 Identities=13% Similarity=0.131 Sum_probs=93.4
Q ss_pred ceEEEEcCCCCcceEEEEEcCCC-CceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcce
Q psy505 26 NCYLAYPGSNSIGEVQIFDADNL-HAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDV 97 (161)
Q Consensus 26 ~~~la~~g~~~dg~v~iWd~~~~-~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~ 97 (161)
...+|+... -+.+|+||.+.+ +++..|.--++++++++ ++.+|...| +..||.+.+..+...+.|-+++
T Consensus 216 ~~~fat~T~--~hqvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn~~g~l~~FD~r~~kl~g~~~kg~tGs- 292 (412)
T KOG3881|consen 216 NYKFATITR--YHQVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGNTKGQLAKFDLRGGKLLGCGLKGITGS- 292 (412)
T ss_pred CceEEEEec--ceeEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEecccchhheecccCceeeccccCCccCC-
Confidence 455665444 599999999986 48899988899999999 888888888 9999999987665446666654
Q ss_pred EEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 98 CIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 98 ~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
+.++.-.|+..+++|++-|+-|||+|+++.+++...-..+..+.+-|.++
T Consensus 293 -irsih~hp~~~~las~GLDRyvRIhD~ktrkll~kvYvKs~lt~il~~~~ 342 (412)
T KOG3881|consen 293 -IRSIHCHPTHPVLASCGLDRYVRIHDIKTRKLLHKVYVKSRLTFILLRDD 342 (412)
T ss_pred -cceEEEcCCCceEEeeccceeEEEeecccchhhhhhhhhccccEEEecCC
Confidence 56777789988999999999999999999877655444566666666544
|
|
| >KOG0322|consensus | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.1e-08 Score=79.73 Aligned_cols=63 Identities=19% Similarity=0.343 Sum_probs=60.3
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEe
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~ 80 (161)
|+..+.+-||++++|++|. ||.||||..++.+++..|+-|...|++++ ++|+||.|+ |-+|++
T Consensus 253 Gv~gvrIRpD~KIlATAGW--D~RiRVyswrtl~pLAVLkyHsagvn~vAfspd~~lmAaaskD~rISLWkL 322 (323)
T KOG0322|consen 253 GVSGVRIRPDGKILATAGW--DHRIRVYSWRTLNPLAVLKYHSAGVNAVAFSPDCELMAAASKDARISLWKL 322 (323)
T ss_pred CccceEEccCCcEEeeccc--CCcEEEEEeccCCchhhhhhhhcceeEEEeCCCCchhhhccCCceEEeeec
Confidence 7888888999999999998 99999999999999999999999999999 899999999 999986
|
|
| >KOG0644|consensus | Back alignment and domain information |
|---|
Probab=98.72 E-value=1.9e-09 Score=94.37 Aligned_cols=98 Identities=12% Similarity=0.239 Sum_probs=85.3
Q ss_pred CceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEE
Q psy505 49 HAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLT 121 (161)
Q Consensus 49 ~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~ 121 (161)
+.++.|.||.+.|.|+. ++++||+|. +|||.++++.++. ..+||.+. +..++-+.+...+++++-|..|+
T Consensus 181 k~ikrLlgH~naVyca~fDrtg~~Iitgsdd~lvKiwS~et~~~lA-s~rGhs~d--itdlavs~~n~~iaaaS~D~vIr 257 (1113)
T KOG0644|consen 181 KNIKRLLGHRNAVYCAIFDRTGRYIITGSDDRLVKIWSMETARCLA-SCRGHSGD--ITDLAVSSNNTMIAAASNDKVIR 257 (1113)
T ss_pred HHHHHHHhhhhheeeeeeccccceEeecCccceeeeeeccchhhhc-cCCCCccc--cchhccchhhhhhhhcccCceEE
Confidence 44566789999999888 999999999 9999999998874 66899754 77888998888888888999999
Q ss_pred EEecCCCCeEEEEE-ecCceEEEEECCcE
Q psy505 122 VCHFKRGSEICNYS-FSNTILAVKLNRKK 149 (161)
Q Consensus 122 iWD~~~~~~i~~l~-~~~~V~~v~~~~~~ 149 (161)
+|-+..+.++..+. |.+.|.+++|+|..
T Consensus 258 vWrl~~~~pvsvLrghtgavtaiafsP~~ 286 (1113)
T KOG0644|consen 258 VWRLPDGAPVSVLRGHTGAVTAIAFSPRA 286 (1113)
T ss_pred EEecCCCchHHHHhccccceeeeccCccc
Confidence 99999999998875 78999999999864
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=98.71 E-value=2e-07 Score=78.76 Aligned_cols=131 Identities=11% Similarity=0.119 Sum_probs=90.5
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCceEEEEeCCc-CceeeE
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSGYRLFSLNSI-DTLEQI 89 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dgiriwd~~~~-~~~~~~ 89 (161)
+.+=-.+|||.-|.++|. ||.||+|.- +|-...++.-...+|.|++ -+.-+-.+.+-|=.+... +.+ -
T Consensus 107 ~~~gRW~~dGtgLlt~GE--DG~iKiWSr-sGMLRStl~Q~~~~v~c~~W~p~S~~vl~c~g~h~~IKpL~~n~k~i--~ 181 (737)
T KOG1524|consen 107 ISSGRWSPDGAGLLTAGE--DGVIKIWSR-SGMLRSTVVQNEESIRCARWAPNSNSIVFCQGGHISIKPLAANSKII--R 181 (737)
T ss_pred hhhcccCCCCceeeeecC--CceEEEEec-cchHHHHHhhcCceeEEEEECCCCCceEEecCCeEEEeeccccccee--E
Confidence 334456899999999997 999999985 4544455555678899998 233333333333333221 222 3
Q ss_pred EeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeE-EEEEecCceEEEEECCcEEEEEec
Q psy505 90 YENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEI-CNYSFSNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 90 ~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i-~~l~~~~~V~~v~~~~~~~vv~~~ 155 (161)
++.|++ -|.++.|+|..-.++||++|-.-||||.. |+.+ .+-.+.-+|.+|+|||+.+..+-.
T Consensus 182 WkAHDG--iiL~~~W~~~s~lI~sgGED~kfKvWD~~-G~~Lf~S~~~ey~ITSva~npd~~~~v~S 245 (737)
T KOG1524|consen 182 WRAHDG--LVLSLSWSTQSNIIASGGEDFRFKIWDAQ-GANLFTSAAEEYAITSVAFNPEKDYLLWS 245 (737)
T ss_pred EeccCc--EEEEeecCccccceeecCCceeEEeeccc-CcccccCChhccceeeeeeccccceeeee
Confidence 566764 47788999977788999999999999976 5444 233456689999999997776644
|
|
| >KOG2106|consensus | Back alignment and domain information |
|---|
Probab=98.70 E-value=7.9e-07 Score=74.61 Aligned_cols=134 Identities=10% Similarity=0.137 Sum_probs=99.9
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCc-eEEEEeCCcCce
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~~ 86 (161)
+.++.-.|+.+|+...++++|. |++++||+ ..+++.+..- .+++.|+. .+|.|+..| .-+.|.++.+++
T Consensus 367 h~delwgla~hps~~q~~T~gq--dk~v~lW~--~~k~~wt~~~-~d~~~~~~fhpsg~va~Gt~~G~w~V~d~e~~~lv 441 (626)
T KOG2106|consen 367 HGDELWGLATHPSKNQLLTCGQ--DKHVRLWN--DHKLEWTKII-EDPAECADFHPSGVVAVGTATGRWFVLDTETQDLV 441 (626)
T ss_pred cccceeeEEcCCChhheeeccC--cceEEEcc--CCceeEEEEe-cCceeEeeccCcceEEEeeccceEEEEecccceeE
Confidence 3446778888999989999886 99999999 4566555432 35566666 799999999 999999886543
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCe-EEEEE-e-cCceEEEEECCcEEEEEec
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE-ICNYS-F-SNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~-i~~l~-~-~~~V~~v~~~~~~~vv~~~ 155 (161)
.+ |.....+..|.|+|++-.++-|+.|+.|.||-+..+.. ...+. + .++|..+.|++|...++..
T Consensus 442 -~~---~~d~~~ls~v~ysp~G~~lAvgs~d~~iyiy~Vs~~g~~y~r~~k~~gs~ithLDwS~Ds~~~~~~ 509 (626)
T KOG2106|consen 442 -TI---HTDNEQLSVVRYSPDGAFLAVGSHDNHIYIYRVSANGRKYSRVGKCSGSPITHLDWSSDSQFLVSN 509 (626)
T ss_pred -EE---EecCCceEEEEEcCCCCEEEEecCCCeEEEEEECCCCcEEEEeeeecCceeEEeeecCCCceEEec
Confidence 33 32233577889999999999999999999999876543 33332 2 3899999999996665543
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=98.68 E-value=6.2e-08 Score=77.97 Aligned_cols=127 Identities=17% Similarity=0.253 Sum_probs=88.3
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCC-----CceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCc
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-----HAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-----~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~ 83 (161)
|.++-|+..+.++.. |-+ .|.|-..|++.+ .+.+.| -|.+.|+|+. +|.+.+.+| |++||.+.-
T Consensus 255 VfAlQf~~s~nLv~~-GcR-ngeI~~iDLR~rnqG~~~~a~rl-yh~Ssvtslq~Lq~s~q~LmaS~M~gkikLyD~R~~ 331 (425)
T KOG2695|consen 255 VFALQFAGSDNLVFN-GCR-NGEIFVIDLRCRNQGNGWCAQRL-YHDSSVTSLQILQFSQQKLMASDMTGKIKLYDLRAT 331 (425)
T ss_pred HHHHHhcccCCeeEe-ccc-CCcEEEEEeeecccCCCcceEEE-EcCcchhhhhhhccccceEeeccCcCceeEeeehhh
Confidence 566777655555555 554 899999999986 244444 5899999998 777788899 999998754
Q ss_pred Cc--eeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEEEecC-----ceEEEEECC
Q psy505 84 DT--LEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNYSFSN-----TILAVKLNR 147 (161)
Q Consensus 84 ~~--~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~-----~V~~v~~~~ 147 (161)
++ -.+.++||.+...-..+.-.+ +++. +++++|--.+||.++.|..++++.|+. -+.+++|..
T Consensus 332 K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I-~s~GdDcytRiWsl~~ghLl~tipf~~s~~e~d~~sv~~~s 402 (425)
T KOG2695|consen 332 KCKKSVMQYEGHVNLSAYLPAHVKEEEGSI-FSVGDDCYTRIWSLDSGHLLCTIPFPYSASEVDIPSVAFDS 402 (425)
T ss_pred hcccceeeeecccccccccccccccccceE-EEccCeeEEEEEecccCceeeccCCCCccccccccceehhc
Confidence 43 125678886422222233333 5554 446688889999999999999998752 466777743
|
|
| >KOG2445|consensus | Back alignment and domain information |
|---|
Probab=98.67 E-value=4.6e-07 Score=72.01 Aligned_cols=102 Identities=10% Similarity=0.112 Sum_probs=69.8
Q ss_pred eccCccceeee------eEEEecCCc-eEEEEeCCcC---ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEe
Q psy505 55 PAHDSPLAALA------SLSVGTKSG-YRLFSLNSID---TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124 (161)
Q Consensus 55 ~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~---~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD 124 (161)
.+|.+-|.+++ .+|+||.|+ ++|||.+... .+...++.|.+++.-+..+...=|.++++++-|++++||.
T Consensus 10 s~h~DlihdVs~D~~GRRmAtCSsDq~vkI~d~~~~s~~W~~Ts~Wrah~~Si~rV~WAhPEfGqvvA~cS~Drtv~iWE 89 (361)
T KOG2445|consen 10 SGHKDLIHDVSFDFYGRRMATCSSDQTVKIWDSTSDSGTWSCTSSWRAHDGSIWRVVWAHPEFGQVVATCSYDRTVSIWE 89 (361)
T ss_pred cCCcceeeeeeecccCceeeeccCCCcEEEEeccCCCCceEEeeeEEecCCcEEEEEecCccccceEEEEecCCceeeee
Confidence 47999999999 899999999 9999964432 1223456676654433333333566788888999999997
Q ss_pred cCCC---------CeEEEEE-ecCceEEEEECCc----EEEEEecc
Q psy505 125 FKRG---------SEICNYS-FSNTILAVKLNRK----KEEEEDEE 156 (161)
Q Consensus 125 ~~~~---------~~i~~l~-~~~~V~~v~~~~~----~~vv~~~~ 156 (161)
-... ...+.+. -++.|+.|+|.|. +++.+..+
T Consensus 90 E~~~~~~~~~~~Wv~~ttl~DsrssV~DV~FaP~hlGLklA~~~aD 135 (361)
T KOG2445|consen 90 EQEKSEEAHGRRWVRRTTLVDSRSSVTDVKFAPKHLGLKLAAASAD 135 (361)
T ss_pred ecccccccccceeEEEEEeecCCcceeEEEecchhcceEEEEeccC
Confidence 6221 2234444 3689999999998 44555444
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.9e-07 Score=76.05 Aligned_cols=96 Identities=16% Similarity=0.178 Sum_probs=73.8
Q ss_pred cceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV 109 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~ 109 (161)
+..+.+|...++.+ ..+-||-+.+.+|+ .+.++..|. ||+=.....-.+..++-||.+ .|-.++.-++..
T Consensus 131 ~~~~di~s~~~~~~-~~~lGhvSml~dVavS~D~~~IitaDRDEkIRvs~ypa~f~IesfclGH~e--FVS~isl~~~~~ 207 (390)
T KOG3914|consen 131 VYSFDILSADSGRC-EPILGHVSMLLDVAVSPDDQFIITADRDEKIRVSRYPATFVIESFCLGHKE--FVSTISLTDNYL 207 (390)
T ss_pred ceeeeeecccccCc-chhhhhhhhhheeeecCCCCEEEEecCCceEEEEecCcccchhhhccccHh--heeeeeeccCce
Confidence 56677887776555 45669999999999 888999999 999776544444456678875 455667777776
Q ss_pred EEEecCCCCeEEEEecCCCCeEEEEEe
Q psy505 110 AVVSLSSPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 110 ~~~s~~~d~~i~iWD~~~~~~i~~l~~ 136 (161)
+.|+++|++|++||.++|+++..+..
T Consensus 208 -LlS~sGD~tlr~Wd~~sgk~L~t~dl 233 (390)
T KOG3914|consen 208 -LLSGSGDKTLRLWDITSGKLLDTCDL 233 (390)
T ss_pred -eeecCCCCcEEEEecccCCcccccch
Confidence 77888899999999999999876654
|
|
| >KOG0650|consensus | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.7e-07 Score=79.91 Aligned_cols=70 Identities=14% Similarity=0.039 Sum_probs=59.7
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc----EEEEEeccc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK----KEEEEDEEE 157 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~----~~vv~~~~~ 157 (161)
+..+++||.+. +.++.-.|.|.+++||++|++|+||.+++|+|+....+.+.|.+|+|||. -|+|+..+.
T Consensus 392 ~~lvyrGHtg~--Vr~iSvdp~G~wlasGsdDGtvriWEi~TgRcvr~~~~d~~I~~vaw~P~~~~~vLAvA~~~~ 465 (733)
T KOG0650|consen 392 CALVYRGHTGL--VRSISVDPSGEWLASGSDDGTVRIWEIATGRCVRTVQFDSEIRSVAWNPLSDLCVLAVAVGEC 465 (733)
T ss_pred eeeeEeccCCe--EEEEEecCCcceeeecCCCCcEEEEEeecceEEEEEeecceeEEEEecCCCCceeEEEEecCc
Confidence 34578899864 56667778899999999999999999999999999999999999999996 566666654
|
|
| >KOG1272|consensus | Back alignment and domain information |
|---|
Probab=98.65 E-value=5.7e-08 Score=80.58 Aligned_cols=123 Identities=12% Similarity=0.160 Sum_probs=88.2
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
+-.+.-||-...+-.+.+ .|+|-+|...+.+++..+..|.++|++++ |+||++.|. +||||++.-..+...
T Consensus 254 ~~vm~qNP~NaVih~Ghs--nGtVSlWSP~skePLvKiLcH~g~V~siAv~~~G~YMaTtG~Dr~~kIWDlR~~~ql~t~ 331 (545)
T KOG1272|consen 254 TDVMKQNPYNAVIHLGHS--NGTVSLWSPNSKEPLVKILCHRGPVSSIAVDRGGRYMATTGLDRKVKIWDLRNFYQLHTY 331 (545)
T ss_pred cchhhcCCccceEEEcCC--CceEEecCCCCcchHHHHHhcCCCcceEEECCCCcEEeecccccceeEeeecccccccee
Confidence 335566776667777665 79999999999999999999999999999 999999999 999999765433222
Q ss_pred EeecCcceEEEEEeecCCeEEEEecCCCCeEEEEe-cCCCC--eEEE-EEe--cCceEEEEECC
Q psy505 90 YENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH-FKRGS--EICN-YSF--SNTILAVKLNR 147 (161)
Q Consensus 90 ~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD-~~~~~--~i~~-l~~--~~~V~~v~~~~ 147 (161)
++ +.....++||-.++..+|-++ -|.||- .-.+. +-.. +.| ..+|.++.|.|
T Consensus 332 ---~t-p~~a~~ls~SqkglLA~~~G~--~v~iw~d~~~~s~~~~~pYm~H~~~~~V~~l~FcP 389 (545)
T KOG1272|consen 332 ---RT-PHPASNLSLSQKGLLALSYGD--HVQIWKDALKGSGHGETPYMNHRCGGPVEDLRFCP 389 (545)
T ss_pred ---ec-CCCccccccccccceeeecCC--eeeeehhhhcCCCCCCcchhhhccCcccccceecc
Confidence 22 223456788877765555433 599994 33322 1112 233 57899999988
|
|
| >KOG1310|consensus | Back alignment and domain information |
|---|
Probab=98.64 E-value=1e-07 Score=80.70 Aligned_cols=78 Identities=12% Similarity=0.142 Sum_probs=63.5
Q ss_pred ceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEE
Q psy505 50 AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTV 122 (161)
Q Consensus 50 ~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~i 122 (161)
..+.|+||++-|+|+. +|||||+|. +.|||.-.-+++..+..||...+..+.+..-.+...++||.+|..|++
T Consensus 42 lE~eL~GH~GCVN~LeWn~dG~lL~SGSDD~r~ivWd~~~~KllhsI~TgHtaNIFsvKFvP~tnnriv~sgAgDk~i~l 121 (758)
T KOG1310|consen 42 LEAELTGHTGCVNCLEWNADGELLASGSDDTRLIVWDPFEYKLLHSISTGHTANIFSVKFVPYTNNRIVLSGAGDKLIKL 121 (758)
T ss_pred hhhhhccccceecceeecCCCCEEeecCCcceEEeecchhcceeeeeecccccceeEEeeeccCCCeEEEeccCcceEEE
Confidence 4567999999999999 999999999 999999877777667778876544444444446677888889999999
Q ss_pred EecCC
Q psy505 123 CHFKR 127 (161)
Q Consensus 123 WD~~~ 127 (161)
+|+.+
T Consensus 122 fdl~~ 126 (758)
T KOG1310|consen 122 FDLDS 126 (758)
T ss_pred Eeccc
Confidence 99985
|
|
| >KOG1538|consensus | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.7e-07 Score=80.90 Aligned_cols=132 Identities=12% Similarity=0.191 Sum_probs=100.1
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee------eEEEecCCce
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA------SLSVGTKSGY 75 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~------~lasgs~dgi 75 (161)
|++++ .+| -+.|++++++.||...|++++ |..|-||+..- ...++ .|.+.|-|++ .|||+|-.-+
T Consensus 45 llqtL-KgH--KDtVycVAys~dGkrFASG~a--DK~VI~W~~kl---EG~LkYSH~D~IQCMsFNP~~h~LasCsLsdF 116 (1081)
T KOG1538|consen 45 LLQPL-KGH--KDTVYCVAYAKDGKRFASGSA--DKSVIIWTSKL---EGILKYSHNDAIQCMSFNPITHQLASCSLSDF 116 (1081)
T ss_pred ccccc-ccc--cceEEEEEEccCCceeccCCC--ceeEEEecccc---cceeeeccCCeeeEeecCchHHHhhhcchhhc
Confidence 45566 444 456999999999999998776 99999998643 23443 6999999999 8999998889
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE----ecCceEEEEECCc
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS----FSNTILAVKLNRK 148 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~----~~~~V~~v~~~~~ 148 (161)
-+|..+.. .. .-|...+.+++-+|..||.+++=|-.++||.|=+- +|+.-..+. .+++|++++|+|.
T Consensus 117 glWS~~qK-~V----~K~kss~R~~~CsWtnDGqylalG~~nGTIsiRNk-~gEek~~I~Rpgg~Nspiwsi~~~p~ 187 (1081)
T KOG1538|consen 117 GLWSPEQK-SV----SKHKSSSRIICCSWTNDGQYLALGMFNGTISIRNK-NGEEKVKIERPGGSNSPIWSICWNPS 187 (1081)
T ss_pred cccChhhh-hH----HhhhhheeEEEeeecCCCcEEEEeccCceEEeecC-CCCcceEEeCCCCCCCCceEEEecCC
Confidence 99998542 11 22444567889999999999988888999998763 455444443 2579999999985
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=98.59 E-value=7.8e-07 Score=76.71 Aligned_cols=67 Identities=18% Similarity=0.277 Sum_probs=49.6
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc--eeee----eccCccceeee--------eEEEecCCc-eEEE
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA--KTMI----PAHDSPLAALA--------SLSVGTKSG-YRLF 78 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~--~~~l----~~H~~~V~~l~--------~lasgs~dg-iriw 78 (161)
+..|.++.|+|....++++|.+ +|.|-+||++.+.. ...+ ..|..+|..+. -|+++|.|| |..|
T Consensus 242 ~s~v~~~~f~p~~p~ll~gG~y-~GqV~lWD~~~~~~~~~s~ls~~~~sh~~~v~~vvW~~~~~~~~f~s~ssDG~i~~W 320 (555)
T KOG1587|consen 242 PSEVTCLKFCPFDPNLLAGGCY-NGQVVLWDLRKGSDTPPSGLSALEVSHSEPVTAVVWLQNEHNTEFFSLSSDGSICSW 320 (555)
T ss_pred CCceeEEEeccCCcceEEeecc-CceEEEEEccCCCCCCCcccccccccCCcCeEEEEEeccCCCCceEEEecCCcEeee
Confidence 3457788888855555556776 99999999998765 3333 24667777766 388888899 9999
Q ss_pred EeC
Q psy505 79 SLN 81 (161)
Q Consensus 79 d~~ 81 (161)
+++
T Consensus 321 ~~~ 323 (555)
T KOG1587|consen 321 DTD 323 (555)
T ss_pred ecc
Confidence 874
|
|
| >KOG2321|consensus | Back alignment and domain information |
|---|
Probab=98.58 E-value=7.7e-07 Score=75.66 Aligned_cols=123 Identities=10% Similarity=0.109 Sum_probs=94.3
Q ss_pred ceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEe--------ecCcceEEEEE
Q psy505 38 GEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYE--------NSQEDVCIVER 102 (161)
Q Consensus 38 g~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~--------~~~~~~~v~~~ 102 (161)
..|.=.|+..|+-+..|.--.++++++. +||+|+.+| +..||.++...+..+-- |......+.++
T Consensus 155 ~evYRlNLEqGrfL~P~~~~~~~lN~v~in~~hgLla~Gt~~g~VEfwDpR~ksrv~~l~~~~~v~s~pg~~~~~svTal 234 (703)
T KOG2321|consen 155 SEVYRLNLEQGRFLNPFETDSGELNVVSINEEHGLLACGTEDGVVEFWDPRDKSRVGTLDAASSVNSHPGGDAAPSVTAL 234 (703)
T ss_pred cceEEEEccccccccccccccccceeeeecCccceEEecccCceEEEecchhhhhheeeecccccCCCccccccCcceEE
Confidence 4688889999999999988888999888 999999999 99999987543322211 11123457889
Q ss_pred eecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe--cCceEEEEECCc---EEEEEeccceee
Q psy505 103 LFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF--SNTILAVKLNRK---KEEEEDEEEEKK 160 (161)
Q Consensus 103 ~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~~---~~vv~~~~~~~~ 160 (161)
.|+.+++-++-|.+++.+-|||+++.+++..-.| .-+|..+.|.+. ..++-++.+|-|
T Consensus 235 ~F~d~gL~~aVGts~G~v~iyDLRa~~pl~~kdh~~e~pi~~l~~~~~~~q~~v~S~Dk~~~k 297 (703)
T KOG2321|consen 235 KFRDDGLHVAVGTSTGSVLIYDLRASKPLLVKDHGYELPIKKLDWQDTDQQNKVVSMDKRILK 297 (703)
T ss_pred EecCCceeEEeeccCCcEEEEEcccCCceeecccCCccceeeecccccCCCceEEecchHHhh
Confidence 9999999999898899999999999998765444 568999999775 455555555544
|
|
| >PRK11028 6-phosphogluconolactonase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=3.8e-06 Score=67.61 Aligned_cols=135 Identities=11% Similarity=0.051 Sum_probs=79.8
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCC-C---CceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCc
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-L---HAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~---~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~ 83 (161)
..+.++++|+|+++.+++.. ++.|.+||+.+ + +.+..+.++.. ..+++ ++++...++ |++||+.+.
T Consensus 81 ~p~~i~~~~~g~~l~v~~~~-~~~v~v~~~~~~g~~~~~~~~~~~~~~-~~~~~~~p~g~~l~v~~~~~~~v~v~d~~~~ 158 (330)
T PRK11028 81 SPTHISTDHQGRFLFSASYN-ANCVSVSPLDKDGIPVAPIQIIEGLEG-CHSANIDPDNRTLWVPCLKEDRIRLFTLSDD 158 (330)
T ss_pred CceEEEECCCCCEEEEEEcC-CCeEEEEEECCCCCCCCceeeccCCCc-ccEeEeCCCCCEEEEeeCCCCEEEEEEECCC
Confidence 35678889999988887764 89999999974 3 23333433322 33333 445566667 999999763
Q ss_pred Cceee----EEeecCcceEEEEEeecCCeEEEE-ecCCCCeEEEEecCC--CC--eEEEEE-ecC------ceEEEEECC
Q psy505 84 DTLEQ----IYENSQEDVCIVERLFSSSLVAVV-SLSSPRKLTVCHFKR--GS--EICNYS-FSN------TILAVKLNR 147 (161)
Q Consensus 84 ~~~~~----~~~~~~~~~~v~~~~fs~~~~~~~-s~~~d~~i~iWD~~~--~~--~i~~l~-~~~------~V~~v~~~~ 147 (161)
..+.. ..+...+ .....++|+|++..+. +...+++|.+||+.. ++ .+.++. .+. ....++|+|
T Consensus 159 g~l~~~~~~~~~~~~g-~~p~~~~~~pdg~~lyv~~~~~~~v~v~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~i~~~p 237 (330)
T PRK11028 159 GHLVAQEPAEVTTVEG-AGPRHMVFHPNQQYAYCVNELNSSVDVWQLKDPHGEIECVQTLDMMPADFSDTRWAADIHITP 237 (330)
T ss_pred CcccccCCCceecCCC-CCCceEEECCCCCEEEEEecCCCEEEEEEEeCCCCCEEEEEEEecCCCcCCCCccceeEEECC
Confidence 32211 0111110 1134678999865543 333478999999973 33 233432 221 234688999
Q ss_pred c--EEEEE
Q psy505 148 K--KEEEE 153 (161)
Q Consensus 148 ~--~~vv~ 153 (161)
+ .+.++
T Consensus 238 dg~~lyv~ 245 (330)
T PRK11028 238 DGRHLYAC 245 (330)
T ss_pred CCCEEEEe
Confidence 7 45554
|
|
| >KOG2919|consensus | Back alignment and domain information |
|---|
Probab=98.54 E-value=2.7e-07 Score=73.82 Aligned_cols=109 Identities=14% Similarity=0.139 Sum_probs=80.5
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC-CCceeeeeccCccce-----eee----eEEEe
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-LHAKTMIPAHDSPLA-----ALA----SLSVG 70 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~~~~~~l~~H~~~V~-----~l~----~lasg 70 (161)
|++|.++ . .+-.||.-+.+.+||..+.+++. .|-.|-.||++. +.++..|..|.+.-+ ++. +||+|
T Consensus 240 ~~pl~ll-g--gh~gGvThL~~~edGn~lfsGaR-k~dkIl~WDiR~~~~pv~~L~rhv~~TNQRI~FDld~~~~~LasG 315 (406)
T KOG2919|consen 240 RRPLQLL-G--GHGGGVTHLQWCEDGNKLFSGAR-KDDKILCWDIRYSRDPVYALERHVGDTNQRILFDLDPKGEILASG 315 (406)
T ss_pred CCceeee-c--ccCCCeeeEEeccCcCeeccccc-CCCeEEEEeehhccchhhhhhhhccCccceEEEecCCCCceeecc
Confidence 4567777 3 45568999999999999998766 488999999986 458888998877433 333 99999
Q ss_pred cCCc-eEEEEeCC-cCceeeEEeecCcceEEEEEeecCCeEEEEecCC
Q psy505 71 TKSG-YRLFSLNS-IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSS 116 (161)
Q Consensus 71 s~dg-iriwd~~~-~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~ 116 (161)
+.|| |++||+.. |+.. ..+..+. ..+..++++|-.-.++.++.
T Consensus 316 ~tdG~V~vwdlk~~gn~~-sv~~~~s--d~vNgvslnP~mpilatssG 360 (406)
T KOG2919|consen 316 DTDGSVRVWDLKDLGNEV-SVTGNYS--DTVNGVSLNPIMPILATSSG 360 (406)
T ss_pred CCCccEEEEecCCCCCcc-ccccccc--ccccceecCcccceeeeccC
Confidence 9999 99999977 5533 3344443 34677888887655555544
|
|
| >KOG0974|consensus | Back alignment and domain information |
|---|
Probab=98.54 E-value=1.2e-06 Score=78.26 Aligned_cols=127 Identities=14% Similarity=0.101 Sum_probs=94.6
Q ss_pred ceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccc-eeee---------eEEEecCCc-eEEEEeCCcCceeeEEeecC
Q psy505 26 NCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPL-AALA---------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQ 94 (161)
Q Consensus 26 ~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V-~~l~---------~lasgs~dg-iriwd~~~~~~~~~~~~~~~ 94 (161)
...++...+ +..+-|||...+.....++.-+-.. .+.. ++++|+.-+ +-+|+... +.....+.||.
T Consensus 99 ~k~i~l~~~--~ns~~i~d~~~~~~~~~i~~~er~~l~~~~~~g~s~~~~~i~~gsv~~~iivW~~~~-dn~p~~l~GHe 175 (967)
T KOG0974|consen 99 NKKIALVTS--RNSLLIRDSKNSSVLSKIQSDERCTLYSSLIIGDSAEELYIASGSVFGEIIVWKPHE-DNKPIRLKGHE 175 (967)
T ss_pred cceEEEEEc--CceEEEEecccCceehhcCCCceEEEEeEEEEeccCcEEEEEeccccccEEEEeccc-cCCcceecccC
Confidence 344444444 6789999998776655554322111 1111 899999988 99999863 32223467888
Q ss_pred cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEE--EEEecCceEEEEECCcEEEEEeccc
Q psy505 95 EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEIC--NYSFSNTILAVKLNRKKEEEEDEEE 157 (161)
Q Consensus 95 ~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~--~l~~~~~V~~v~~~~~~~vv~~~~~ 157 (161)
+. +..+.|+-|+.++++.|+|+++++|++.+++... -+.|+..|+++.|.|.+++++.+|.
T Consensus 176 G~--iF~i~~s~dg~~i~s~SdDRsiRlW~i~s~~~~~~~~fgHsaRvw~~~~~~n~i~t~gedc 238 (967)
T KOG0974|consen 176 GS--IFSIVTSLDGRYIASVSDDRSIRLWPIDSREVLGCTGFGHSARVWACCFLPNRIITVGEDC 238 (967)
T ss_pred Cc--eEEEEEccCCcEEEEEecCcceeeeecccccccCcccccccceeEEEEeccceeEEeccce
Confidence 64 7788899999999999999999999999998775 3668899999999999999988774
|
|
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.53 E-value=2.7e-06 Score=72.09 Aligned_cols=115 Identities=9% Similarity=0.140 Sum_probs=90.7
Q ss_pred eEEEEcCCCCcceEEEEEcCCCCceeeee--ccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcce
Q psy505 27 CYLAYPGSNSIGEVQIFDADNLHAKTMIP--AHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDV 97 (161)
Q Consensus 27 ~~la~~g~~~dg~v~iWd~~~~~~~~~l~--~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~ 97 (161)
..+|- |-. -|.|-++++..|+.-..+. .|.++|+++. +|-|++.|+ +-.|+..++.-+ ..+... ..
T Consensus 71 ~~lvl-gt~-~g~v~~ys~~~g~it~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~-~~~~~~--~~ 145 (541)
T KOG4547|consen 71 SMLVL-GTP-QGSVLLYSVAGGEITAKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVII-RIWKEQ--KP 145 (541)
T ss_pred eEEEe-ecC-CccEEEEEecCCeEEEEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceee-eeeccC--CC
Confidence 34444 443 7999999999999888876 6999999988 999999999 999999876533 344433 33
Q ss_pred EEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 98 CIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 98 ~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
.+.++.++||+-.+++++ ++|++||.++++.+..|. |.++|..+.|--.
T Consensus 146 ~~~sl~is~D~~~l~~as--~~ik~~~~~~kevv~~ftgh~s~v~t~~f~~~ 195 (541)
T KOG4547|consen 146 LVSSLCISPDGKILLTAS--RQIKVLDIETKEVVITFTGHGSPVRTLSFTTL 195 (541)
T ss_pred ccceEEEcCCCCEEEecc--ceEEEEEccCceEEEEecCCCcceEEEEEEEe
Confidence 466788999977777654 489999999999999997 5789999998443
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.53 E-value=1.4e-07 Score=52.33 Aligned_cols=32 Identities=22% Similarity=0.409 Sum_probs=29.8
Q ss_pred CCceeeeeccCccceeee------eEEEecCCc-eEEEE
Q psy505 48 LHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 48 ~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd 79 (161)
+++++++++|+++|++++ +|++|+.|+ |++||
T Consensus 1 g~~~~~~~~h~~~i~~i~~~~~~~~~~s~~~D~~i~vwd 39 (39)
T PF00400_consen 1 GKCVRTFRGHSSSINSIAWSPDGNFLASGSSDGTIRVWD 39 (39)
T ss_dssp EEEEEEEESSSSSEEEEEEETTSSEEEEEETTSEEEEEE
T ss_pred CeEEEEEcCCCCcEEEEEEecccccceeeCCCCEEEEEC
Confidence 367899999999999999 999999999 99997
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG0771|consensus | Back alignment and domain information |
|---|
Probab=98.52 E-value=5.2e-07 Score=73.74 Aligned_cols=110 Identities=19% Similarity=0.215 Sum_probs=81.5
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee----------------c-------------c------
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP----------------A-------------H------ 57 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~----------------~-------------H------ 57 (161)
+..-|..+.|+|||+.||+-|. | ..+||++++|.+++... + |
T Consensus 185 ~~~eV~DL~FS~dgk~lasig~--d-~~~VW~~~~g~~~a~~t~~~k~~~~~~cRF~~d~~~~~l~laa~~~~~~~v~~~ 261 (398)
T KOG0771|consen 185 HHAEVKDLDFSPDGKFLASIGA--D-SARVWSVNTGAALARKTPFSKDEMFSSCRFSVDNAQETLRLAASQFPGGGVRLC 261 (398)
T ss_pred hcCccccceeCCCCcEEEEecC--C-ceEEEEeccCchhhhcCCcccchhhhhceecccCCCceEEEEEecCCCCceeEE
Confidence 3445889999999999999886 7 99999999983322211 0 0
Q ss_pred -------------------Cccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEE
Q psy505 58 -------------------DSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAV 111 (161)
Q Consensus 58 -------------------~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~ 111 (161)
...|++++ ++|.|+.|| |-|++..+-+++.-+.+.|. ..|..+.|+|+...+
T Consensus 262 ~~~~w~~~~~l~~~~~~~~~~siSsl~VS~dGkf~AlGT~dGsVai~~~~~lq~~~~vk~aH~--~~VT~ltF~Pdsr~~ 339 (398)
T KOG0771|consen 262 DISLWSGSNFLRLRKKIKRFKSISSLAVSDDGKFLALGTMDGSVAIYDAKSLQRLQYVKEAHL--GFVTGLTFSPDSRYL 339 (398)
T ss_pred EeeeeccccccchhhhhhccCcceeEEEcCCCcEEEEeccCCcEEEEEeceeeeeEeehhhhe--eeeeeEEEcCCcCcc
Confidence 12345555 999999999 99999976555433334454 478899999999999
Q ss_pred EecCCCCeEEEEecCC
Q psy505 112 VSLSSPRKLTVCHFKR 127 (161)
Q Consensus 112 ~s~~~d~~i~iWD~~~ 127 (161)
++-+.|++..|--+.-
T Consensus 340 ~svSs~~~~~v~~l~v 355 (398)
T KOG0771|consen 340 ASVSSDNEAAVTKLAV 355 (398)
T ss_pred cccccCCceeEEEEee
Confidence 8888888888877654
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=5.7e-07 Score=75.38 Aligned_cols=125 Identities=10% Similarity=0.000 Sum_probs=82.8
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-ceeeeeccCccceeee----eEEEecCCceEEEEeCCcCceeeEEe
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-AKTMIPAHDSPLAALA----SLSVGTKSGYRLFSLNSIDTLEQIYE 91 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-~~~~l~~H~~~V~~l~----~lasgs~dgiriwd~~~~~~~~~~~~ 91 (161)
+...+++|||..|++.+.. +|..+||++.... ....+ +|.......+ +|+.++.+++-+||+.+|+.. .+..
T Consensus 294 ~~~~~wSpDG~~i~f~s~~-~g~~~I~~~~~~~~~~~~l-~~~~~~~~~SpDG~~ia~~~~~~i~~~Dl~~g~~~-~lt~ 370 (429)
T PRK01742 294 NTEPSWSPDGQSILFTSDR-SGSPQVYRMSASGGGASLV-GGRGYSAQISADGKTLVMINGDNVVKQDLTSGSTE-VLSS 370 (429)
T ss_pred cCCEEECCCCCEEEEEECC-CCCceEEEEECCCCCeEEe-cCCCCCccCCCCCCEEEEEcCCCEEEEECCCCCeE-EecC
Confidence 4567789999988877664 7889999875432 22233 4433111222 677777777666999887643 2222
Q ss_pred ecCcceEEEEEeecCCeEEEEecCCCCeEEEEec--CCCCeEEEEE-ecCceEEEEECCc
Q psy505 92 NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF--KRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 92 ~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~--~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
... ..+..|+||+..++.++.++..++|++ .+|+.+..+. +.+.+...+|+|-
T Consensus 371 ~~~----~~~~~~sPdG~~i~~~s~~g~~~~l~~~~~~G~~~~~l~~~~g~~~~p~wsp~ 426 (429)
T PRK01742 371 TFL----DESPSISPNGIMIIYSSTQGLGKVLQLVSADGRFKARLPGSDGQVKFPAWSPY 426 (429)
T ss_pred CCC----CCCceECCCCCEEEEEEcCCCceEEEEEECCCCceEEccCCCCCCCCcccCCC
Confidence 221 235679999988877767777888875 4688888886 4667888999884
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=98.49 E-value=5e-06 Score=73.22 Aligned_cols=119 Identities=13% Similarity=0.149 Sum_probs=88.7
Q ss_pred cceEEEEEcCCCCceeee-----eccCccceeee------eEEEecCCc-eEEEEeCC--cC-ceeeEEeecCcceEEEE
Q psy505 37 IGEVQIFDADNLHAKTMI-----PAHDSPLAALA------SLSVGTKSG-YRLFSLNS--ID-TLEQIYENSQEDVCIVE 101 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l-----~~H~~~V~~l~------~lasgs~dg-iriwd~~~--~~-~~~~~~~~~~~~~~v~~ 101 (161)
+..+.+|+..++. .++. .-|.-++++.+ ++|+|..|| |.+|.--. ++ .-..++.-|.. .|.+
T Consensus 180 ~~~~~~~~v~~~~-~~~~~~~~~~~Htf~~t~~~~spn~~~~Aa~d~dGrI~vw~d~~~~~~~~t~t~lHWH~~--~V~~ 256 (792)
T KOG1963|consen 180 MCKIHIYFVPKHT-KHTSSRDITVHHTFNITCVALSPNERYLAAGDSDGRILVWRDFGSSDDSETCTLLHWHHD--EVNS 256 (792)
T ss_pred eeeEEEEEecccc-eeeccchhhhhhcccceeEEeccccceEEEeccCCcEEEEeccccccccccceEEEeccc--ccce
Confidence 5678899998855 2221 24666667776 999999999 99997432 22 11244555543 4889
Q ss_pred EeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--ecCceEEEEECCc---EEEEEeccceee
Q psy505 102 RLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--FSNTILAVKLNRK---KEEEEDEEEEKK 160 (161)
Q Consensus 102 ~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--~~~~V~~v~~~~~---~~vv~~~~~~~~ 160 (161)
++|+++|-.+.||+..+.+.+|.+++++ .+|- ..++|+.+.++|| ..+++.+++||-
T Consensus 257 L~fS~~G~~LlSGG~E~VLv~Wq~~T~~--kqfLPRLgs~I~~i~vS~ds~~~sl~~~DNqI~l 318 (792)
T KOG1963|consen 257 LSFSSDGAYLLSGGREGVLVLWQLETGK--KQFLPRLGSPILHIVVSPDSDLYSLVLEDNQIHL 318 (792)
T ss_pred eEEecCCceEeecccceEEEEEeecCCC--cccccccCCeeEEEEEcCCCCeEEEEecCceEEE
Confidence 9999999999999999999999999998 4543 4699999999998 556666778874
|
|
| >KOG1524|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.9e-06 Score=72.95 Aligned_cols=142 Identities=13% Similarity=0.124 Sum_probs=93.4
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+...|++++..|++..++++. .|.+.|=-+.....+...+||.+-|-++. +++||++|- +||||..- .+
T Consensus 144 ~~~~v~c~~W~p~S~~vl~c~---g~h~~IKpL~~n~k~i~WkAHDGiiL~~~W~~~s~lI~sgGED~kfKvWD~~G-~~ 219 (737)
T KOG1524|consen 144 NEESIRCARWAPNSNSIVFCQ---GGHISIKPLAANSKIIRWRAHDGLVLSLSWSTQSNIIASGGEDFRFKIWDAQG-AN 219 (737)
T ss_pred cCceeEEEEECCCCCceEEec---CCeEEEeecccccceeEEeccCcEEEEeecCccccceeecCCceeEEeecccC-cc
Confidence 456789999999988888865 37788877777777788999999999998 999999999 99999742 22
Q ss_pred eeeEEeecCcc---------------------------eEEEEEeecCCeEEEEecCC----------------------
Q psy505 86 LEQIYENSQED---------------------------VCIVERLFSSSLVAVVSLSS---------------------- 116 (161)
Q Consensus 86 ~~~~~~~~~~~---------------------------~~v~~~~fs~~~~~~~s~~~---------------------- 116 (161)
+-.. ..|..+ -+|..++||+||..++.|.+
T Consensus 220 Lf~S-~~~ey~ITSva~npd~~~~v~S~nt~R~~~p~~GSifnlsWS~DGTQ~a~gt~~G~v~~A~~ieq~l~~~n~~~t 298 (737)
T KOG1524|consen 220 LFTS-AAEEYAITSVAFNPEKDYLLWSYNTARFSSPRVGSIFNLSWSADGTQATCGTSTGQLIVAYAIEQQLVSGNLKAT 298 (737)
T ss_pred cccC-ChhccceeeeeeccccceeeeeeeeeeecCCCccceEEEEEcCCCceeeccccCceEEEeeeehhhhhhccceeE
Confidence 2100 112111 12344455555544433311
Q ss_pred ---CCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEeccceee
Q psy505 117 ---PRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEEDEEEEKK 160 (161)
Q Consensus 117 ---d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~~~~~~~ 160 (161)
...|.+=|+.++.+ ..+.|++.|....++-.+|+|++..+||-
T Consensus 299 ~~~r~~I~vrdV~~~v~-d~LE~p~rv~k~sL~Y~hLvvaTs~qvyi 344 (737)
T KOG1524|consen 299 SKSRKSITVRDVATGVQ-DILEFPQRVVKFSLGYGHLVVATSLQVYI 344 (737)
T ss_pred eeccceEEeehhhhhHH-HHhhCccceeeeeeceeEEEEEeccEEEE
Confidence 12233334443333 23456777888888888888888888874
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=98.48 E-value=1.5e-06 Score=70.55 Aligned_cols=129 Identities=13% Similarity=0.152 Sum_probs=91.6
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeec-cCccceeee-------eEEEecCCceEEEEeCCcCcee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA-HDSPLAALA-------SLSVGTKSGYRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~-H~~~V~~l~-------~lasgs~dgiriwd~~~~~~~~ 87 (161)
-+..|+.|+-=.-+|+++. |-+||++|-.+ ++...|+. ....|+|++ -||.|...||.||....--...
T Consensus 100 dlr~~aWhqH~~~fava~n--ddvVriy~kss-t~pt~Lks~sQrnvtclawRPlsaselavgCr~gIciW~~s~tln~~ 176 (445)
T KOG2139|consen 100 DLRGVAWHQHIIAFAVATN--DDVVRIYDKSS-TCPTKLKSVSQRNVTCLAWRPLSASELAVGCRAGICIWSDSRTLNAN 176 (445)
T ss_pred ceeeEeechhhhhhhhhcc--CcEEEEeccCC-CCCceecchhhcceeEEEeccCCcceeeeeecceeEEEEcCcccccc
Confidence 3667777763333455443 89999999887 66666653 345788888 7889999999999864211111
Q ss_pred -----------eEEeecCcceEEEEEeecCCeEEEEec-CCCCeEEEEecCCCCeEEEEEe-cCceEEEEECCc
Q psy505 88 -----------QIYENSQEDVCIVERLFSSSLVAVVSL-SSPRKLTVCHFKRGSEICNYSF-SNTILAVKLNRK 148 (161)
Q Consensus 88 -----------~~~~~~~~~~~v~~~~fs~~~~~~~s~-~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~ 148 (161)
+++++ .+...|.+|.+.+|+..++++ ..|..|+|||+.+|+++.-... .+.+.-++||||
T Consensus 177 r~~~~~s~~~~qvl~~-pgh~pVtsmqwn~dgt~l~tAS~gsssi~iWdpdtg~~~pL~~~glgg~slLkwSPd 249 (445)
T KOG2139|consen 177 RNIRMMSTHHLQVLQD-PGHNPVTSMQWNEDGTILVTASFGSSSIMIWDPDTGQKIPLIPKGLGGFSLLKWSPD 249 (445)
T ss_pred cccccccccchhheeC-CCCceeeEEEEcCCCCEEeecccCcceEEEEcCCCCCcccccccCCCceeeEEEcCC
Confidence 12222 234679999999999888775 4567899999999998655433 578888999998
|
|
| >PF00400 WD40: WD domain, G-beta repeat; InterPro: IPR019781 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.6e-07 Score=50.17 Aligned_cols=38 Identities=24% Similarity=0.398 Sum_probs=31.8
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEE
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFD 44 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd 44 (161)
++++++ ..+.. .|.+++++|++..+++++. |+.|++||
T Consensus 2 ~~~~~~-~~h~~--~i~~i~~~~~~~~~~s~~~--D~~i~vwd 39 (39)
T PF00400_consen 2 KCVRTF-RGHSS--SINSIAWSPDGNFLASGSS--DGTIRVWD 39 (39)
T ss_dssp EEEEEE-ESSSS--SEEEEEEETTSSEEEEEET--TSEEEEEE
T ss_pred eEEEEE-cCCCC--cEEEEEEecccccceeeCC--CCEEEEEC
Confidence 577888 55554 4899999999999999876 99999998
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events.; PDB: 2ZKQ_a 3CFV_B 3CFS_B 1PEV_A 1NR0_A 1VYH_T 3RFH_A 3O2Z_T 3FRX_C 3U5G_g .... |
| >KOG4547|consensus | Back alignment and domain information |
|---|
Probab=98.43 E-value=8.7e-06 Score=69.10 Aligned_cols=122 Identities=17% Similarity=0.128 Sum_probs=90.0
Q ss_pred CCceEEEEcCCCCcceEEEEEcCCCCceeeee--ccCcc-----ceeee----------------------eEEEecCCc
Q psy505 24 SDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP--AHDSP-----LAALA----------------------SLSVGTKSG 74 (161)
Q Consensus 24 ~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~--~H~~~-----V~~l~----------------------~lasgs~dg 74 (161)
|...++|++.+ ||.+||||...++.-+.|. +|... .+.+. .++-|...|
T Consensus 3 ~~~~~~A~~~~--~g~l~iw~t~~~~~~~e~~p~~~~s~t~~~~~w~L~~~~s~~k~~~~~~~~~~s~~t~~lvlgt~~g 80 (541)
T KOG4547|consen 3 PALDYFALSTG--DGRLRIWDTAKNQLQQEFAPIASLSGTCTYTKWGLSADYSPMKWLSLEKAKKASLDTSMLVLGTPQG 80 (541)
T ss_pred chhheEeecCC--CCeEEEEEccCceeeeeeccchhccCcceeEEEEEEeccchHHHHhHHHHhhccCCceEEEeecCCc
Confidence 34568888766 9999999999887655553 22111 11111 788899999
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-cCceEEEEECCc
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-SNTILAVKLNRK 148 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~ 148 (161)
|-+|++..|+.. ..+.+..+.-.+.+...+-+..++.|+++|..+..|+++.++.++.... +..+.++..+||
T Consensus 81 ~v~~ys~~~g~it-~~~st~~h~~~v~~~~~~~~~~ciyS~~ad~~v~~~~~~~~~~~~~~~~~~~~~~sl~is~D 155 (541)
T KOG4547|consen 81 SVLLYSVAGGEIT-AKLSTDKHYGNVNEILDAQRLGCIYSVGADLKVVYILEKEKVIIRIWKEQKPLVSSLCISPD 155 (541)
T ss_pred cEEEEEecCCeEE-EEEecCCCCCcceeeecccccCceEecCCceeEEEEecccceeeeeeccCCCccceEEEcCC
Confidence 999999988743 4444323233466767777777888888899999999999999988875 678999999999
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=9.3e-06 Score=68.12 Aligned_cols=127 Identities=13% Similarity=0.073 Sum_probs=80.9
Q ss_pred eeEEeecCCCceEEEEcCCC-CcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc---eEEEEeCCcC
Q psy505 16 GICCLCVNSDNCYLAYPGSN-SIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG---YRLFSLNSID 84 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~-~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg---iriwd~~~~~ 84 (161)
.+...+++|||..|++.+.. .+..|.+||+.+++. ..+..+.+.+.+.+ ++.+.+.+| |.+||+++++
T Consensus 203 ~v~~p~wSpDG~~lay~s~~~g~~~i~~~dl~~g~~-~~l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~~ 281 (435)
T PRK05137 203 LVLTPRFSPNRQEITYMSYANGRPRVYLLDLETGQR-ELVGNFPGMTFAPRFSPDGRKVVMSLSQGGNTDIYTMDLRSGT 281 (435)
T ss_pred CeEeeEECCCCCEEEEEEecCCCCEEEEEECCCCcE-EEeecCCCcccCcEECCCCCEEEEEEecCCCceEEEEECCCCc
Confidence 46778889999999886531 146899999998865 34555555555444 344566665 6667887765
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEE--ec-CCCCeEEEEecCCCCeEEEEEe-cCceEEEEECCc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVV--SL-SSPRKLTVCHFKRGSEICNYSF-SNTILAVKLNRK 148 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~--s~-~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~ 148 (161)
. ..+ ..+.. ...+..|+|++..++ +. ..+..|.+||+..++. ..+.+ ...+....|+|+
T Consensus 282 ~-~~L-t~~~~--~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~~-~~lt~~~~~~~~~~~Spd 344 (435)
T PRK05137 282 T-TRL-TDSPA--IDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSNP-RRISFGGGRYSTPVWSPR 344 (435)
T ss_pred e-EEc-cCCCC--ccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCCe-EEeecCCCcccCeEECCC
Confidence 3 233 22221 234578999875444 32 2234688999876654 45554 456677889998
|
|
| >PRK01742 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=3.3e-06 Score=70.80 Aligned_cols=122 Identities=12% Similarity=0.145 Sum_probs=75.5
Q ss_pred EeecCCCceEEEEcCCCCcceEEEE--EcCCCCceeeeeccCccceeee------eEEEec-CCc-eEEEEeCCcCceee
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIF--DADNLHAKTMIPAHDSPLAALA------SLSVGT-KSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iW--d~~~~~~~~~l~~H~~~V~~l~------~lasgs-~dg-iriwd~~~~~~~~~ 88 (161)
+++++|||..|+++... +|.++|| |+.+++ +..+..|...+.+.+ .|+.++ .+| .+||++.......+
T Consensus 252 ~~~wSPDG~~La~~~~~-~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~i~f~s~~~g~~~I~~~~~~~~~~~ 329 (429)
T PRK01742 252 APAFSPDGSRLAFASSK-DGVLNIYVMGANGGT-PSQLTSGAGNNTEPSWSPDGQSILFTSDRSGSPQVYRMSASGGGAS 329 (429)
T ss_pred ceeECCCCCEEEEEEec-CCcEEEEEEECCCCC-eEeeccCCCCcCCEEECCCCCEEEEEECCCCCceEEEEECCCCCeE
Confidence 56789999999887653 7876665 666654 456777776666665 455444 566 89998754222212
Q ss_pred EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcE
Q psy505 89 IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~ 149 (161)
.. ++.. ....|+|++..++..+.++ +.+||+.+++... +.......++.|+|++
T Consensus 330 ~l-~~~~----~~~~~SpDG~~ia~~~~~~-i~~~Dl~~g~~~~-lt~~~~~~~~~~sPdG 383 (429)
T PRK01742 330 LV-GGRG----YSAQISADGKTLVMINGDN-VVKQDLTSGSTEV-LSSTFLDESPSISPNG 383 (429)
T ss_pred Ee-cCCC----CCccCCCCCCEEEEEcCCC-EEEEECCCCCeEE-ecCCCCCCCceECCCC
Confidence 22 3321 2356899887666554444 6669999987542 2211233567788884
|
|
| >KOG1517|consensus | Back alignment and domain information |
|---|
Probab=98.37 E-value=1.8e-06 Score=77.87 Aligned_cols=116 Identities=18% Similarity=0.230 Sum_probs=81.3
Q ss_pred CCCCCCceeEEeecCCCceE-EEEcCCCCcceEEEEEcCCCCce--eeeeccC--c-cceeee------eEEEecCCc-e
Q psy505 9 DTPPNPNGICCLCVNSDNCY-LAYPGSNSIGEVQIFDADNLHAK--TMIPAHD--S-PLAALA------SLSVGTKSG-Y 75 (161)
Q Consensus 9 ~~~~~~~~v~~~~~~~d~~~-la~~g~~~dg~v~iWd~~~~~~~--~~l~~H~--~-~V~~l~------~lasgs~dg-i 75 (161)
..|....+|..+++.++|.- |++ |+. ||.|++||++..... -++..|. + .++++. .+|+|+. + |
T Consensus 1251 R~h~~~~~Iv~~slq~~G~~elvS-gs~-~G~I~~~DlR~~~~e~~~~iv~~~~yGs~lTal~VH~hapiiAsGs~-q~i 1327 (1387)
T KOG1517|consen 1251 REHNDVEPIVHLSLQRQGLGELVS-GSQ-DGDIQLLDLRMSSKETFLTIVAHWEYGSALTALTVHEHAPIIASGSA-QLI 1327 (1387)
T ss_pred cccCCcccceeEEeecCCCcceee-ecc-CCeEEEEecccCcccccceeeeccccCccceeeeeccCCCeeeecCc-ceE
Confidence 44555556888888887755 665 553 999999999974332 3344555 3 367776 9999999 6 9
Q ss_pred EEEEeCCcCceeeEEeecC-----cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC
Q psy505 76 RLFSLNSIDTLEQIYENSQ-----EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~-----~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~ 129 (161)
+||++. |+.+ ..++.+. ..-.+.+++|+|--..++.|+.|++|.||....++
T Consensus 1328 kIy~~~-G~~l-~~~k~n~~F~~q~~gs~scL~FHP~~~llAaG~~Ds~V~iYs~~k~~ 1384 (1387)
T KOG1517|consen 1328 KIYSLS-GEQL-NIIKYNPGFMGQRIGSVSCLAFHPHRLLLAAGSADSTVSIYSCEKPR 1384 (1387)
T ss_pred EEEecC-hhhh-cccccCcccccCcCCCcceeeecchhHhhhhccCCceEEEeecCCcC
Confidence 999984 4544 3333221 11235789999988888888999999999877654
|
|
| >KOG4227|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=7.3e-06 Score=67.34 Aligned_cols=121 Identities=15% Similarity=0.166 Sum_probs=82.6
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCc---cceeee------eEEEecC
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS---PLAALA------SLSVGTK 72 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~---~V~~l~------~lasgs~ 72 (161)
|+|..+ .+++...|.+++|+.....+. +|.. +|+|.+.|+.+.+.+..+ +|++ .|..+. .|++.+.
T Consensus 95 KPI~~~--~~~H~SNIF~L~F~~~N~~~~-SG~~-~~~VI~HDiEt~qsi~V~-~~~~~~~~VY~m~~~P~DN~~~~~t~ 169 (609)
T KOG4227|consen 95 KPIGVM--EHPHRSNIFSLEFDLENRFLY-SGER-WGTVIKHDIETKQSIYVA-NENNNRGDVYHMDQHPTDNTLIVVTR 169 (609)
T ss_pred CCceec--cCccccceEEEEEccCCeeEe-cCCC-cceeEeeecccceeeeee-cccCcccceeecccCCCCceEEEEec
Confidence 455556 566767899999987555554 5664 999999999998776655 4555 777776 8999999
Q ss_pred Cc-eEEEEeCCcCceeeEEeecCcceEEEEEeecC---CeEEEEecCCCCeEEEEecCCCC
Q psy505 73 SG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSS---SLVAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 73 dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~---~~~~~~s~~~d~~i~iWD~~~~~ 129 (161)
++ |-+||.+........+.....+.....+-|+| ..+++++ +.+.+-+||.+..+
T Consensus 170 ~~~V~~~D~Rd~~~~~~~~~~AN~~~~F~t~~F~P~~P~Li~~~~--~~~G~~~~D~R~~~ 228 (609)
T KOG4227|consen 170 AKLVSFIDNRDRQNPISLVLPANSGKNFYTAEFHPETPALILVNS--ETGGPNVFDRRMQA 228 (609)
T ss_pred CceEEEEeccCCCCCCceeeecCCCccceeeeecCCCceeEEecc--ccCCCCceeecccc
Confidence 99 99999987542223333333233445666775 4444443 45579999987643
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=98.36 E-value=5.8e-06 Score=75.46 Aligned_cols=135 Identities=11% Similarity=0.169 Sum_probs=82.0
Q ss_pred EeecC-CCceEEEEcCCCCcceEEEEEcCCC-------CceeeeeccCccceeee------eEEEecCCc-eEEEEeCC-
Q psy505 19 CLCVN-SDNCYLAYPGSNSIGEVQIFDADNL-------HAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNS- 82 (161)
Q Consensus 19 ~~~~~-~d~~~la~~g~~~dg~v~iWd~~~~-------~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~- 82 (161)
.++.+ |++.++++++. ||+||+||++.- ++..++.--.+.+.++. .+|.|+.|| |++.++..
T Consensus 1053 k~a~s~~~~s~FvsgS~--DGtVKvW~~~k~~~~~~s~rS~ltys~~~sr~~~vt~~~~~~~~Av~t~DG~v~~~~id~~ 1130 (1431)
T KOG1240|consen 1053 KLAVSSEHTSLFVSGSD--DGTVKVWNLRKLEGEGGSARSELTYSPEGSRVEKVTMCGNGDQFAVSTKDGSVRVLRIDHY 1130 (1431)
T ss_pred ceeecCCCCceEEEecC--CceEEEeeehhhhcCcceeeeeEEEeccCCceEEEEeccCCCeEEEEcCCCeEEEEEcccc
Confidence 44444 45578888665 999999998752 23333332345666666 999999999 99999865
Q ss_pred -cCcee----eEEeecCcceEEEEEeecC--CeEEEEecCCCCeEEEEecCCCCeEEEEEe---cCceEEEEECCcEEEE
Q psy505 83 -IDTLE----QIYENSQEDVCIVERLFSS--SLVAVVSLSSPRKLTVCHFKRGSEICNYSF---SNTILAVKLNRKKEEE 152 (161)
Q Consensus 83 -~~~~~----~~~~~~~~~~~v~~~~fs~--~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~---~~~V~~v~~~~~~~vv 152 (161)
+.... .....+..+..+...+|.. ....++-+..-+.|..||++...-+-.+.+ .+-|.++..+|.....
T Consensus 1131 ~~~~~~~~~~ri~n~~~~g~vv~m~a~~~~~~S~~lvy~T~~~~iv~~D~r~~~~~w~lk~~~~hG~vTSi~idp~~~Wl 1210 (1431)
T KOG1240|consen 1131 NVSKRVATQVRIPNLKKDGVVVSMHAFTAIVQSHVLVYATDLSRIVSWDTRMRHDAWRLKNQLRHGLVTSIVIDPWCNWL 1210 (1431)
T ss_pred ccccceeeeeecccccCCCceEEeecccccccceeEEEEEeccceEEecchhhhhHHhhhcCccccceeEEEecCCceEE
Confidence 22110 0111122333333344432 111233333445799999998776666654 3789999999876655
Q ss_pred Eec
Q psy505 153 EDE 155 (161)
Q Consensus 153 ~~~ 155 (161)
+..
T Consensus 1211 viG 1213 (1431)
T KOG1240|consen 1211 VIG 1213 (1431)
T ss_pred EEe
Confidence 554
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.36 E-value=3.7e-05 Score=63.56 Aligned_cols=116 Identities=16% Similarity=0.140 Sum_probs=77.5
Q ss_pred cceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV 109 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~ 109 (161)
+|.|.+.|..+.+.+..+.....+-..+. ++.+++.|| +.++|+.+++.+.++..|. ....+++|+++.
T Consensus 15 ~~~v~viD~~t~~~~~~i~~~~~~h~~~~~s~Dgr~~yv~~rdg~vsviD~~~~~~v~~i~~G~----~~~~i~~s~DG~ 90 (369)
T PF02239_consen 15 SGSVAVIDGATNKVVARIPTGGAPHAGLKFSPDGRYLYVANRDGTVSVIDLATGKVVATIKVGG----NPRGIAVSPDGK 90 (369)
T ss_dssp GTEEEEEETTT-SEEEEEE-STTEEEEEE-TT-SSEEEEEETTSEEEEEETTSSSEEEEEE-SS----EEEEEEE--TTT
T ss_pred CCEEEEEECCCCeEEEEEcCCCCceeEEEecCCCCEEEEEcCCCeEEEEECCcccEEEEEecCC----CcceEEEcCCCC
Confidence 89999999999999999986544322232 566667889 9999999988776654443 246788998875
Q ss_pred EE-EecCCCCeEEEEecCCCCeEEEEEe---c-----CceEEEEECCc--EEEEEecc
Q psy505 110 AV-VSLSSPRKLTVCHFKRGSEICNYSF---S-----NTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 110 ~~-~s~~~d~~i~iWD~~~~~~i~~l~~---~-----~~V~~v~~~~~--~~vv~~~~ 156 (161)
++ ++...++++.|+|.++.+.+..+.- + +.|.++..+|. ..++.++|
T Consensus 91 ~~~v~n~~~~~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd 148 (369)
T PF02239_consen 91 YVYVANYEPGTVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKD 148 (369)
T ss_dssp EEEEEEEETTEEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETT
T ss_pred EEEEEecCCCceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEcc
Confidence 44 4556788999999999999988752 1 36777776654 45666664
|
... |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=3.9e-06 Score=68.87 Aligned_cols=69 Identities=14% Similarity=0.070 Sum_probs=54.7
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~ 82 (161)
.+..-|..++++|...-|+..++. +..|+|.|+++..++..+.+| .++++++ ++-.|-..| |-|||++.
T Consensus 191 ~~g~~IrdlafSp~~~GLl~~asl-~nkiki~dlet~~~vssy~a~-~~~wSC~wDlde~h~IYaGl~nG~VlvyD~R~ 267 (463)
T KOG1645|consen 191 GEGSFIRDLAFSPFNEGLLGLASL-GNKIKIMDLETSCVVSSYIAY-NQIWSCCWDLDERHVIYAGLQNGMVLVYDMRQ 267 (463)
T ss_pred ccchhhhhhccCccccceeeeecc-CceEEEEecccceeeeheecc-CCceeeeeccCCcceeEEeccCceEEEEEccC
Confidence 344557788888865533333443 789999999999999999999 7899888 888899999 99999874
|
|
| >KOG3881|consensus | Back alignment and domain information |
|---|
Probab=98.33 E-value=1.7e-05 Score=64.72 Aligned_cols=136 Identities=12% Similarity=0.167 Sum_probs=90.1
Q ss_pred eeEEeecCCCceEEEEcCCCCc--ceEEEEEcCCCCceeeeeccC---------ccceeee----------eEEEecCCc
Q psy505 16 GICCLCVNSDNCYLAYPGSNSI--GEVQIFDADNLHAKTMIPAHD---------SPLAALA----------SLSVGTKSG 74 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~d--g~v~iWd~~~~~~~~~l~~H~---------~~V~~l~----------~lasgs~dg 74 (161)
|++.+--+|...++++.|+ .. ..++|||+++. .+.++|-. -|||-.. .||+++.-+
T Consensus 150 g~~~~r~~~~~p~Iva~GG-ke~~n~lkiwdle~~--~qiw~aKNvpnD~L~LrVPvW~tdi~Fl~g~~~~~fat~T~~h 226 (412)
T KOG3881|consen 150 GLYDVRQTDTDPYIVATGG-KENINELKIWDLEQS--KQIWSAKNVPNDRLGLRVPVWITDIRFLEGSPNYKFATITRYH 226 (412)
T ss_pred ceeeeccCCCCCceEecCc-hhcccceeeeecccc--eeeeeccCCCCccccceeeeeeccceecCCCCCceEEEEecce
Confidence 5666666665555555444 25 68999999976 45555432 2333222 789999988
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEE-EE-ecCceEEEEECCc--E
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICN-YS-FSNTILAVKLNRK--K 149 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~-l~-~~~~V~~v~~~~~--~ 149 (161)
+|+||++.++.....+....+++....+..+.+.++++- .-+.+..+|.++++.+.. +. +.+.|.++..+|+ .
T Consensus 227 qvR~YDt~~qRRPV~~fd~~E~~is~~~l~p~gn~Iy~gn--~~g~l~~FD~r~~kl~g~~~kg~tGsirsih~hp~~~~ 304 (412)
T KOG3881|consen 227 QVRLYDTRHQRRPVAQFDFLENPISSTGLTPSGNFIYTGN--TKGQLAKFDLRGGKLLGCGLKGITGSIRSIHCHPTHPV 304 (412)
T ss_pred eEEEecCcccCcceeEeccccCcceeeeecCCCcEEEEec--ccchhheecccCceeeccccCCccCCcceEEEcCCCce
Confidence 999999987532233333334555555555666654443 345799999999998865 65 5889999999999 5
Q ss_pred EEEEecc
Q psy505 150 EEEEDEE 156 (161)
Q Consensus 150 ~vv~~~~ 156 (161)
++.|.-|
T Consensus 305 las~GLD 311 (412)
T KOG3881|consen 305 LASCGLD 311 (412)
T ss_pred EEeeccc
Confidence 5656555
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.5e-05 Score=63.23 Aligned_cols=126 Identities=13% Similarity=0.126 Sum_probs=85.2
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCceee
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
++-+++.|.-++++-+ +|.+.+-+..... .++++++|+-+.+-.. ++.+|++|+ ++-||++.-+. -
T Consensus 126 slD~~~~~~~i~vs~s--~G~~~~v~~t~~~le~vq~wk~He~E~Wta~f~~~~pnlvytGgDD~~l~~~D~R~p~~--~ 201 (339)
T KOG0280|consen 126 SLDISTSGTKIFVSDS--RGSISGVYETEMVLEKVQTWKVHEFEAWTAKFSDKEPNLVYTGGDDGSLSCWDIRIPKT--F 201 (339)
T ss_pred EEEeeccCceEEEEcC--CCcEEEEecceeeeeecccccccceeeeeeecccCCCceEEecCCCceEEEEEecCCcc--e
Confidence 3444566666776555 7888865555443 3458999999998777 889999999 99999983222 2
Q ss_pred EEeecC-cceEEEEEeecC-CeEEEEecCCCCeEEEEecCC-CCeEEEEEecCceEEEEECCc
Q psy505 89 IYENSQ-EDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKR-GSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 89 ~~~~~~-~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~-~~~i~~l~~~~~V~~v~~~~~ 148 (161)
+++... +...|+++.=|| ....++.|+=|..|++||.+. ++++..-.-.+.|+.++.+|.
T Consensus 202 i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~DtRnm~kPl~~~~v~GGVWRi~~~p~ 264 (339)
T KOG0280|consen 202 IWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVLDTRNMGKPLFKAKVGGGVWRIKHHPE 264 (339)
T ss_pred eeecceeeecceEEEecCCCCCceEEEeccccceeeeehhcccCccccCccccceEEEEecch
Confidence 333110 223466665564 344555565567899999984 666655555688999999886
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=4e-05 Score=64.36 Aligned_cols=127 Identities=14% Similarity=0.161 Sum_probs=76.1
Q ss_pred eeEEeecCCCceEEEEcCCC-CcceEEEEEcCCCCce--eeeeccCccceeee----eEE-EecCCc---eEEEEeCCcC
Q psy505 16 GICCLCVNSDNCYLAYPGSN-SIGEVQIFDADNLHAK--TMIPAHDSPLAALA----SLS-VGTKSG---YRLFSLNSID 84 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~-~dg~v~iWd~~~~~~~--~~l~~H~~~V~~l~----~la-sgs~dg---iriwd~~~~~ 84 (161)
.+...+++|||..||+.+.. .+..+.+||+.+++.. ..+.+|...+ ..+ .|+ +.+.+| |.+||+++++
T Consensus 200 ~~~~p~wSPDG~~la~~s~~~g~~~i~i~dl~~G~~~~l~~~~~~~~~~-~~SPDG~~La~~~~~~g~~~I~~~d~~tg~ 278 (429)
T PRK03629 200 PLMSPAWSPDGSKLAYVTFESGRSALVIQTLANGAVRQVASFPRHNGAP-AFSPDGSKLAFALSKTGSLNLYVMDLASGQ 278 (429)
T ss_pred ceeeeEEcCCCCEEEEEEecCCCcEEEEEECCCCCeEEccCCCCCcCCe-EECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence 35678889999999875321 1457999999988643 3344543221 111 444 334444 8889998875
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCC-CC--eEEEEecCCCCeEEEEEe-cCceEEEEECCc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSS-PR--KLTVCHFKRGSEICNYSF-SNTILAVKLNRK 148 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~-d~--~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~ 148 (161)
. ..+..++. .+....|+|++..++..+. ++ .|.++|+..++. ..+.+ ........|+||
T Consensus 279 ~-~~lt~~~~---~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~SpD 341 (429)
T PRK03629 279 I-RQVTDGRS---NNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGAP-QRITWEGSQNQDADVSSD 341 (429)
T ss_pred E-EEccCCCC---CcCceEECCCCCEEEEEeCCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCC
Confidence 3 33433322 3567789998865543322 22 355557777654 45554 345667889997
|
|
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=98.26 E-value=2.2e-06 Score=73.02 Aligned_cols=137 Identities=12% Similarity=0.114 Sum_probs=86.4
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCC-------CceeeeeccCccceeeeeEE----EecCCc-eEEEEeCCcC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-------HAKTMIPAHDSPLAALASLS----VGTKSG-YRLFSLNSID 84 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-------~~~~~l~~H~~~V~~l~~la----sgs~dg-iriwd~~~~~ 84 (161)
|.+++.=.+....++++. |.+||+|.++.. .|..++++|+.+|.++.+|+ .+|-|| |.+||.--|.
T Consensus 738 iRai~AidNENSFiSASk--DKTVKLWSik~EgD~~~tsaCQfTY~aHkk~i~~igfL~~lr~i~ScD~giHlWDPFigr 815 (1034)
T KOG4190|consen 738 IRAIAAIDNENSFISASK--DKTVKLWSIKPEGDEIGTSACQFTYQAHKKPIHDIGFLADLRSIASCDGGIHLWDPFIGR 815 (1034)
T ss_pred hHHHHhcccccceeeccC--CceEEEEEeccccCccccceeeeEhhhccCcccceeeeeccceeeeccCcceeecccccc
Confidence 334333224445566554 999999998753 37778999999999999332 345566 9999987777
Q ss_pred ceeeEEee--cCcceEEEEEeec-CCeEEEEecCCCCeEEEEecCCCCeEEEEEe-----c-CceEEEEECCc--EEEEE
Q psy505 85 TLEQIYEN--SQEDVCIVERLFS-SSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-----S-NTILAVKLNRK--KEEEE 153 (161)
Q Consensus 85 ~~~~~~~~--~~~~~~v~~~~fs-~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-----~-~~V~~v~~~~~--~~vv~ 153 (161)
++.+.... |...-.+.++ -+ ..-+.+++++...+||++|.+.+.-.+++.- + ..+.+++..+. ++++.
T Consensus 816 ~Laq~~dapk~~a~~~ikcl-~nv~~~iliAgcsaeSTVKl~DaRsce~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~ 894 (1034)
T KOG4190|consen 816 LLAQMEDAPKEGAGGNIKCL-ENVDRHILIAGCSAESTVKLFDARSCEWTCELKVCNAPGPNALTRAIAVADKGNKLAAA 894 (1034)
T ss_pred hhHhhhcCcccCCCceeEec-ccCcchheeeeccchhhheeeecccccceeeEEeccCCCCchheeEEEeccCcchhhHH
Confidence 65433211 2211122222 22 2334556666778999999999988888762 1 35777777554 55555
Q ss_pred ecc
Q psy505 154 DEE 156 (161)
Q Consensus 154 ~~~ 156 (161)
+.+
T Consensus 895 LSn 897 (1034)
T KOG4190|consen 895 LSN 897 (1034)
T ss_pred hcC
Confidence 443
|
|
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=98.26 E-value=1.3e-05 Score=64.70 Aligned_cols=69 Identities=17% Similarity=0.253 Sum_probs=56.8
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-ceeeeeccCccceeee------eEEEecCCc-eEEEEeC
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~ 81 (161)
.++...+.+++.+|....+.++.+ |-.|-+||+..++ ..+.+++|.+.|..++ .+.|+++|| |.+||..
T Consensus 194 ~~h~~~~~~l~Wd~~~~~LfSg~~--d~~vi~wdigg~~g~~~el~gh~~kV~~l~~~~~t~~l~S~~edg~i~~w~mn 270 (404)
T KOG1409|consen 194 NGHTGEVTCLKWDPGQRLLFSGAS--DHSVIMWDIGGRKGTAYELQGHNDKVQALSYAQHTRQLISCGEDGGIVVWNMN 270 (404)
T ss_pred cCcccceEEEEEcCCCcEEEeccc--cCceEEEeccCCcceeeeeccchhhhhhhhhhhhheeeeeccCCCeEEEEecc
Confidence 355667899999987777777555 9999999998765 3467899999999888 788899999 9999974
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=98.25 E-value=2e-05 Score=63.05 Aligned_cols=136 Identities=13% Similarity=0.159 Sum_probs=99.3
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC---ceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH---AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~---~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
..+.+.++++|++.+|.+-. ..+|.|+...... ..++++.|...|+++. .+.+|+.|. -.+|....+.
T Consensus 11 ~pitchAwn~drt~iAv~~~--~~evhiy~~~~~~~w~~~htls~Hd~~vtgvdWap~snrIvtcs~drnayVw~~~~~~ 88 (361)
T KOG1523|consen 11 EPITCHAWNSDRTQIAVSPN--NHEVHIYSMLGADLWEPAHTLSEHDKIVTGVDWAPKSNRIVTCSHDRNAYVWTQPSGG 88 (361)
T ss_pred CceeeeeecCCCceEEeccC--CceEEEEEecCCCCceeceehhhhCcceeEEeecCCCCceeEccCCCCccccccCCCC
Confidence 34889999999999998765 6799999988765 6789999999999998 788888887 9999985442
Q ss_pred ---ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeE--EE-E--EecCceEEEEECCcEEEEEec
Q psy505 85 ---TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEI--CN-Y--SFSNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 85 ---~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i--~~-l--~~~~~V~~v~~~~~~~vv~~~ 155 (161)
+...+++ +... ..++.|+|+.-.++.|+.-+.|.||=++..+.= .. + ..+++|+++.|+|+...++..
T Consensus 89 ~WkptlvLlR-iNrA--At~V~WsP~enkFAVgSgar~isVcy~E~ENdWWVsKhikkPirStv~sldWhpnnVLlaaG 164 (361)
T KOG1523|consen 89 TWKPTLVLLR-INRA--ATCVKWSPKENKFAVGSGARLISVCYYEQENDWWVSKHIKKPIRSTVTSLDWHPNNVLLAAG 164 (361)
T ss_pred eeccceeEEE-eccc--eeeEeecCcCceEEeccCccEEEEEEEecccceehhhhhCCccccceeeeeccCCcceeccc
Confidence 2223333 3333 446678887766666666789999988754321 11 1 246889999999986666543
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.25 E-value=1.7e-05 Score=66.57 Aligned_cols=123 Identities=13% Similarity=0.045 Sum_probs=74.1
Q ss_pred EeecCCCceEEEEcCCCCcc--eEEEEEcCCCCceeeeeccCccceeee------eEEEecC-Cc---eEEEEeCCcCce
Q psy505 19 CLCVNSDNCYLAYPGSNSIG--EVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTK-SG---YRLFSLNSIDTL 86 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg--~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~-dg---iriwd~~~~~~~ 86 (161)
+.+++|||..++++.+. +| .|.+||+.+++. ..+..|.....+.+ .|+.+++ +| +.++|+.+++..
T Consensus 252 ~~~~SpDG~~l~~~~s~-~g~~~Iy~~d~~~g~~-~~lt~~~~~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~~ 329 (433)
T PRK04922 252 APSFSPDGRRLALTLSR-DGNPEIYVMDLGSRQL-TRLTNHFGIDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSAE 329 (433)
T ss_pred CceECCCCCEEEEEEeC-CCCceEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCeE
Confidence 56778999888765432 44 699999998765 45655554444444 5665554 44 445566565432
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEe--cC-CCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVS--LS-SPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s--~~-~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
.+. .+.. ......|||++..++- .. .+..|.+||+.+++.. .+..........|+||
T Consensus 330 -~lt-~~g~--~~~~~~~SpDG~~Ia~~~~~~~~~~I~v~d~~~g~~~-~Lt~~~~~~~p~~spd 389 (433)
T PRK04922 330 -RLT-FQGN--YNARASVSPDGKKIAMVHGSGGQYRIAVMDLSTGSVR-TLTPGSLDESPSFAPN 389 (433)
T ss_pred -Eee-cCCC--CccCEEECCCCCEEEEEECCCCceeEEEEECCCCCeE-ECCCCCCCCCceECCC
Confidence 222 1211 1235678988765543 21 2236999999888754 4444334556789888
|
|
| >PRK03629 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.23 E-value=3.3e-05 Score=64.88 Aligned_cols=126 Identities=12% Similarity=0.085 Sum_probs=74.6
Q ss_pred eEEeecCCCceEEEEcCCCCcc--eEEEEEcCCCCceeeeeccCccceeee------eEEEecCC-c-eEEE--EeCCcC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIG--EVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKS-G-YRLF--SLNSID 84 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg--~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~d-g-iriw--d~~~~~ 84 (161)
..+++++|||..|++.... +| .|.+||+.+++... +..+...+...+ .|+..+++ | .+|| |+.+++
T Consensus 245 ~~~~~~SPDG~~La~~~~~-~g~~~I~~~d~~tg~~~~-lt~~~~~~~~~~wSPDG~~I~f~s~~~g~~~Iy~~d~~~g~ 322 (429)
T PRK03629 245 NGAPAFSPDGSKLAFALSK-TGSLNLYVMDLASGQIRQ-VTDGRSNNTEPTWFPDSQNLAYTSDQAGRPQVYKVNINGGA 322 (429)
T ss_pred cCCeEECCCCCEEEEEEcC-CCCcEEEEEECCCCCEEE-ccCCCCCcCceEECCCCCEEEEEeCCCCCceEEEEECCCCC
Confidence 3456789999999876442 45 58899999887644 443334444444 56655554 4 6666 555554
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEec---CCCCeEEEEecCCCCeEEEEEecCceEEEEECCcE
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSL---SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~---~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~ 149 (161)
. .++ ..+.. ......|+|++..++.. .....|.+||+.+++. ..+.......+..|+||+
T Consensus 323 ~-~~l-t~~~~--~~~~~~~SpDG~~Ia~~~~~~g~~~I~~~dl~~g~~-~~Lt~~~~~~~p~~SpDG 385 (429)
T PRK03629 323 P-QRI-TWEGS--QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV-QVLTDTFLDETPSIAPNG 385 (429)
T ss_pred e-EEe-ecCCC--CccCEEECCCCCEEEEEEccCCCceEEEEECCCCCe-EEeCCCCCCCCceECCCC
Confidence 3 223 22221 23456789987555432 1234589999998874 344422234467788883
|
|
| >PRK04922 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.22 E-value=4.2e-05 Score=64.18 Aligned_cols=128 Identities=14% Similarity=0.099 Sum_probs=76.4
Q ss_pred eeEEeecCCCceEEEEcCCC-CcceEEEEEcCCCCceeeeeccCccceeee------eE-EEecCCc---eEEEEeCCcC
Q psy505 16 GICCLCVNSDNCYLAYPGSN-SIGEVQIFDADNLHAKTMIPAHDSPLAALA------SL-SVGTKSG---YRLFSLNSID 84 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~-~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~l-asgs~dg---iriwd~~~~~ 84 (161)
.+...+++|||..|++.+.. .+..|.+||+.+++.. .+..+.+...+.+ .+ .+.+.+| |.+||+.+++
T Consensus 205 ~v~~p~wSpDg~~la~~s~~~~~~~l~~~dl~~g~~~-~l~~~~g~~~~~~~SpDG~~l~~~~s~~g~~~Iy~~d~~~g~ 283 (433)
T PRK04922 205 PILSPAWSPDGKKLAYVSFERGRSAIYVQDLATGQRE-LVASFRGINGAPSFSPDGRRLALTLSRDGNPEIYVMDLGSRQ 283 (433)
T ss_pred ccccccCCCCCCEEEEEecCCCCcEEEEEECCCCCEE-EeccCCCCccCceECCCCCEEEEEEeCCCCceEEEEECCCCC
Confidence 35677889999999986642 0246999999987653 3333333333333 33 3444444 9999998876
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCC-CC--eEEEEecCCCCeEEEEEe-cCceEEEEECCcE
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSS-PR--KLTVCHFKRGSEICNYSF-SNTILAVKLNRKK 149 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~-d~--~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~~ 149 (161)
. ..+ ..+.. ...+..|+|++..++..++ ++ .|.++|+.+++. ..+.+ .......+|+|++
T Consensus 284 ~-~~l-t~~~~--~~~~~~~spDG~~l~f~sd~~g~~~iy~~dl~~g~~-~~lt~~g~~~~~~~~SpDG 347 (433)
T PRK04922 284 L-TRL-TNHFG--IDTEPTWAPDGKSIYFTSDRGGRPQIYRVAASGGSA-ERLTFQGNYNARASVSPDG 347 (433)
T ss_pred e-EEC-ccCCC--CccceEECCCCCEEEEEECCCCCceEEEEECCCCCe-EEeecCCCCccCEEECCCC
Confidence 3 233 22321 1346789998865553322 22 477778877763 44444 2344568999883
|
|
| >KOG1587|consensus | Back alignment and domain information |
|---|
Probab=98.21 E-value=5.1e-06 Score=71.71 Aligned_cols=112 Identities=9% Similarity=0.022 Sum_probs=82.5
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcC-CCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDAD-NLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~-~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~ 83 (161)
+...|.++.++|=+..+..+++ |.+||||.-. ...++..++-+.+.|.+++ .||++..|| +-|||+...
T Consensus 397 h~g~v~~v~~nPF~~k~fls~g--DW~vriWs~~~~~~Pl~~~~~~~~~v~~vaWSptrpavF~~~d~~G~l~iWDLl~~ 474 (555)
T KOG1587|consen 397 HIGPVYAVSRNPFYPKNFLSVG--DWTVRIWSEDVIASPLLSLDSSPDYVTDVAWSPTRPAVFATVDGDGNLDIWDLLQD 474 (555)
T ss_pred cCcceEeeecCCCccceeeeec--cceeEeccccCCCCcchhhhhccceeeeeEEcCcCceEEEEEcCCCceehhhhhcc
Confidence 4456899999997766665555 8999999988 6678888888888898888 899999999 999998643
Q ss_pred CceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCC
Q psy505 84 DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR 127 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~ 127 (161)
.. .-+....-.......+.+++++..++.|+..+++++|++..
T Consensus 475 ~~-~Pv~s~~~~~~~l~~~~~s~~g~~lavGd~~G~~~~~~l~~ 517 (555)
T KOG1587|consen 475 DE-EPVLSQKVCSPALTRVRWSPNGKLLAVGDANGTTHILKLSE 517 (555)
T ss_pred cc-CCcccccccccccceeecCCCCcEEEEecCCCcEEEEEcCc
Confidence 21 11111100112344567788888888888888999999853
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=98.16 E-value=6.9e-05 Score=61.92 Aligned_cols=126 Identities=13% Similarity=0.082 Sum_probs=76.8
Q ss_pred eEEeecCCCceEEEEcCCC-CcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc---eEEEEeCCcCc
Q psy505 17 ICCLCVNSDNCYLAYPGSN-SIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG---YRLFSLNSIDT 85 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~-~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg---iriwd~~~~~~ 85 (161)
+...+++|||..||+.... ....|++||+.+++.. .+..+.+.+.+.+ ++.+.+.++ +.+||+.++..
T Consensus 192 ~~~p~~Spdg~~la~~~~~~~~~~i~v~d~~~g~~~-~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~i~~~d~~~~~~ 270 (417)
T TIGR02800 192 ILSPAWSPDGQKLAYVSFESGKPEIYVQDLATGQRE-KVASFPGMNGAPAFSPDGSKLAVSLSKDGNPDIYVMDLDGKQL 270 (417)
T ss_pred eecccCCCCCCEEEEEEcCCCCcEEEEEECCCCCEE-EeecCCCCccceEECCCCCEEEEEECCCCCccEEEEECCCCCE
Confidence 5667789999999986542 0247999999987653 3334444444444 334455444 88889887643
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEE--ec-CCCCeEEEEecCCCCeEEEEEe-cCceEEEEECCc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVV--SL-SSPRKLTVCHFKRGSEICNYSF-SNTILAVKLNRK 148 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~--s~-~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~ 148 (161)
..+.. +.. ......|+|++..++ +. .....|.+||+.+++. ..+.+ ...+....|+|+
T Consensus 271 -~~l~~-~~~--~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~~-~~l~~~~~~~~~~~~spd 332 (417)
T TIGR02800 271 -TRLTN-GPG--IDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGEV-RRLTFRGGYNASPSWSPD 332 (417)
T ss_pred -EECCC-CCC--CCCCEEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEeecCCCCccCeEECCC
Confidence 23322 221 123557888775443 32 1223688889887764 44543 456777889987
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=98.15 E-value=9.9e-06 Score=63.35 Aligned_cols=79 Identities=18% Similarity=0.322 Sum_probs=62.0
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-ceeeeeccCccceeee-------eEEEecCCc
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-AKTMIPAHDSPLAALA-------SLSVGTKSG 74 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-~~~~l~~H~~~V~~l~-------~lasgs~dg 74 (161)
++.+++-.....++|.+++.+|..+.++..|.. ||.+-|||++... +...+.+|+.+++-+- -|.++|+||
T Consensus 168 p~~t~~~~~~~~~~v~~l~~hp~qq~~v~cgt~-dg~~~l~d~rn~~~p~S~l~ahk~~i~eV~FHpk~p~~Lft~sedG 246 (319)
T KOG4714|consen 168 PIKTLIPSKKALDAVTALCSHPAQQHLVCCGTD-DGIVGLWDARNVAMPVSLLKAHKAEIWEVHFHPKNPEHLFTCSEDG 246 (319)
T ss_pred ccccccccccccccchhhhCCcccccEEEEecC-CCeEEEEEcccccchHHHHHHhhhhhhheeccCCCchheeEecCCC
Confidence 444443333345578899999977777777774 9999999999986 4556889999999988 788999999
Q ss_pred -eEEEEeCC
Q psy505 75 -YRLFSLNS 82 (161)
Q Consensus 75 -iriwd~~~ 82 (161)
+--||..+
T Consensus 247 slw~wdas~ 255 (319)
T KOG4714|consen 247 SLWHWDAST 255 (319)
T ss_pred cEEEEcCCC
Confidence 99999864
|
|
| >PF02239 Cytochrom_D1: Cytochrome D1 heme domain; PDB: 1NNO_B 1HZU_A 1N15_B 1N50_A 1GJQ_A 1BL9_B 1NIR_B 1N90_B 1HZV_A 1AOQ_A | Back alignment and domain information |
|---|
Probab=98.12 E-value=0.00053 Score=56.70 Aligned_cols=141 Identities=16% Similarity=0.202 Sum_probs=78.5
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEec-CCc
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGT-KSG 74 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs-~dg 74 (161)
+.+.+| ++..++ -..+.++|||.++..++. ||.|.++|+.+++.+.+++.-.++ .+++ +++++. ..+
T Consensus 27 ~~~~~i-~~~~~~--h~~~~~s~Dgr~~yv~~r--dg~vsviD~~~~~~v~~i~~G~~~-~~i~~s~DG~~~~v~n~~~~ 100 (369)
T PF02239_consen 27 KVVARI-PTGGAP--HAGLKFSPDGRYLYVANR--DGTVSVIDLATGKVVATIKVGGNP-RGIAVSPDGKYVYVANYEPG 100 (369)
T ss_dssp SEEEEE-E-STTE--EEEEE-TT-SSEEEEEET--TSEEEEEETTSSSEEEEEE-SSEE-EEEEE--TTTEEEEEEEETT
T ss_pred eEEEEE-cCCCCc--eeEEEecCCCCEEEEEcC--CCeEEEEECCcccEEEEEecCCCc-ceEEEcCCCCEEEEEecCCC
Confidence 456777 454443 234557889988877664 999999999999999999876554 4455 555554 556
Q ss_pred -eEEEEeCCcCceeeEEeecC----cceEEEEEeecCCeE-EEEecCCCCeEEEEecCCCCeEE--EEEecCceEEEEEC
Q psy505 75 -YRLFSLNSIDTLEQIYENSQ----EDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGSEIC--NYSFSNTILAVKLN 146 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~----~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~~i~--~l~~~~~V~~v~~~ 146 (161)
+.|+|.++.+++..+..+.. ....+..+..+|... ++++-.+-+.|-+-|....+.+. .+.-...-....|+
T Consensus 101 ~v~v~D~~tle~v~~I~~~~~~~~~~~~Rv~aIv~s~~~~~fVv~lkd~~~I~vVdy~d~~~~~~~~i~~g~~~~D~~~d 180 (369)
T PF02239_consen 101 TVSVIDAETLEPVKTIPTGGMPVDGPESRVAAIVASPGRPEFVVNLKDTGEIWVVDYSDPKNLKVTTIKVGRFPHDGGFD 180 (369)
T ss_dssp EEEEEETTT--EEEEEE--EE-TTTS---EEEEEE-SSSSEEEEEETTTTEEEEEETTTSSCEEEEEEE--TTEEEEEE-
T ss_pred ceeEeccccccceeecccccccccccCCCceeEEecCCCCEEEEEEccCCeEEEEEeccccccceeeecccccccccccC
Confidence 99999999877755433211 112344555554332 34443344556666766654332 23223445556666
Q ss_pred Cc
Q psy505 147 RK 148 (161)
Q Consensus 147 ~~ 148 (161)
|+
T Consensus 181 pd 182 (369)
T PF02239_consen 181 PD 182 (369)
T ss_dssp TT
T ss_pred cc
Confidence 65
|
... |
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=98.12 E-value=2.9e-05 Score=68.40 Aligned_cols=133 Identities=16% Similarity=0.278 Sum_probs=96.2
Q ss_pred EEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------------------e
Q psy505 5 HTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------------------S 66 (161)
Q Consensus 5 ~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------------------~ 66 (161)
+|+ -++.++..-.++-.+|.| .+|+++ -..|-+-|..+.+.++.+.-|...|+.+. +
T Consensus 7 ~tl-pG~l~~sN~~A~Dw~~~G-LiAygs---hslV~VVDs~s~q~iqsie~h~s~V~~VrWap~~~p~~llS~~~~~ll 81 (1062)
T KOG1912|consen 7 HTL-PGPLSRSNRNAADWSPSG-LIAYGS---HSLVSVVDSRSLQLIQSIELHQSAVTSVRWAPAPSPRDLLSPSSSQLL 81 (1062)
T ss_pred ccC-CCCCCcccccccccCccc-eEEEec---CceEEEEehhhhhhhhccccCccceeEEEeccCCCchhccCcccccee
Confidence 455 356666666677777777 778754 36799999999999999999999998877 7
Q ss_pred EEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeec------CCeEEEEecCCCCeEEEEecCCCCeEEEEEecCc
Q psy505 67 LSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFS------SSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNT 139 (161)
Q Consensus 67 lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs------~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~ 139 (161)
+|++.-.| |-|||...+... .-++.|..+ +..|.|= .+.++...+ .++|.+||..+|+..=.+.+...
T Consensus 82 iAsaD~~GrIil~d~~~~s~~-~~l~~~~~~--~qdl~W~~~rd~Srd~LlaIh~--ss~lvLwntdtG~k~Wk~~ys~~ 156 (1062)
T KOG1912|consen 82 IASADISGRIILVDFVLASVI-NWLSHSNDS--VQDLCWVPARDDSRDVLLAIHG--SSTLVLWNTDTGEKFWKYDYSHE 156 (1062)
T ss_pred EEeccccCcEEEEEehhhhhh-hhhcCCCcc--hhheeeeeccCcchheeEEecC--CcEEEEEEccCCceeeccccCCc
Confidence 78888888 999999877543 233444433 4555553 244444444 46999999999998777777666
Q ss_pred eEE-EEECC
Q psy505 140 ILA-VKLNR 147 (161)
Q Consensus 140 V~~-v~~~~ 147 (161)
+++ .++.|
T Consensus 157 iLs~f~~DP 165 (1062)
T KOG1912|consen 157 ILSCFRVDP 165 (1062)
T ss_pred ceeeeeeCC
Confidence 666 77766
|
|
| >KOG1963|consensus | Back alignment and domain information |
|---|
Probab=98.10 E-value=6e-05 Score=66.63 Aligned_cols=126 Identities=16% Similarity=0.186 Sum_probs=86.8
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCC--CC--ceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADN--LH--AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~--~~--~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+.+++++|++.++|++.. ||.|.+|.-.. .. .-+.|.=|.++|.+++ +|.||+..| .-+|.++++++
T Consensus 208 ~t~~~~spn~~~~Aa~d~--dGrI~vw~d~~~~~~~~t~t~lHWH~~~V~~L~fS~~G~~LlSGG~E~VLv~Wq~~T~~k 285 (792)
T KOG1963|consen 208 ITCVALSPNERYLAAGDS--DGRILVWRDFGSSDDSETCTLLHWHHDEVNSLSFSSDGAYLLSGGREGVLVLWQLETGKK 285 (792)
T ss_pred ceeEEeccccceEEEecc--CCcEEEEeccccccccccceEEEecccccceeEEecCCceEeecccceEEEEEeecCCCc
Confidence 567788889999998666 99999997443 21 2356777889999999 999999999 99999999873
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE---e---------cCceEEEEECCc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS---F---------SNTILAVKLNRK 148 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~---~---------~~~V~~v~~~~~ 148 (161)
+++-.-. ..+..+.+||++-..+-.-+||.|++-....-.....++ + .+-...+.++|.
T Consensus 286 --qfLPRLg--s~I~~i~vS~ds~~~sl~~~DNqI~li~~~dl~~k~tIsgi~~~~~~~k~~~~~l~t~~~idpr 356 (792)
T KOG1963|consen 286 --QFLPRLG--SPILHIVVSPDSDLYSLVLEDNQIHLIKASDLEIKSTISGIKPPTPSTKTRPQSLTTGVSIDPR 356 (792)
T ss_pred --ccccccC--CeeEEEEEcCCCCeEEEEecCceEEEEeccchhhhhhccCccCCCccccccccccceeEEEcCC
Confidence 3443222 247777788755333222368999988664443333332 1 234667888884
|
|
| >KOG2139|consensus | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00013 Score=59.51 Aligned_cols=128 Identities=9% Similarity=0.074 Sum_probs=85.1
Q ss_pred CceeEEeecCCCc-eEEEEcCCCCcceEEEEEcCCC----C--------ceeee--eccCccceeee------eEEEecC
Q psy505 14 PNGICCLCVNSDN-CYLAYPGSNSIGEVQIFDADNL----H--------AKTMI--PAHDSPLAALA------SLSVGTK 72 (161)
Q Consensus 14 ~~~v~~~~~~~d~-~~la~~g~~~dg~v~iWd~~~~----~--------~~~~l--~~H~~~V~~l~------~lasgs~ 72 (161)
-..|.++++-|.+ +-++.+. -+-|-||..... + +...+ .|| .+|+++. .++++|-
T Consensus 140 QrnvtclawRPlsaselavgC---r~gIciW~~s~tln~~r~~~~~s~~~~qvl~~pgh-~pVtsmqwn~dgt~l~tAS~ 215 (445)
T KOG2139|consen 140 QRNVTCLAWRPLSASELAVGC---RAGICIWSDSRTLNANRNIRMMSTHHLQVLQDPGH-NPVTSMQWNEDGTILVTASF 215 (445)
T ss_pred hcceeEEEeccCCcceeeeee---cceeEEEEcCcccccccccccccccchhheeCCCC-ceeeEEEEcCCCCEEeeccc
Confidence 3457888888844 4566544 467999976532 1 11222 466 7899998 8888887
Q ss_pred Cc--eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC-eEEEEEecCceEEEEECCc
Q psy505 73 SG--YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS-EICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 73 dg--iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~-~i~~l~~~~~V~~v~~~~~ 148 (161)
+. |+|||..+|.+......+-. + +.-+.|||++-++..+.-|..-++|+..+.. +..-...++.|....|+|+
T Consensus 216 gsssi~iWdpdtg~~~pL~~~glg-g--~slLkwSPdgd~lfaAt~davfrlw~e~q~wt~erw~lgsgrvqtacWspc 291 (445)
T KOG2139|consen 216 GSSSIMIWDPDTGQKIPLIPKGLG-G--FSLLKWSPDGDVLFAATCDAVFRLWQENQSWTKERWILGSGRVQTACWSPC 291 (445)
T ss_pred CcceEEEEcCCCCCcccccccCCC-c--eeeEEEcCCCCEEEEecccceeeeehhcccceecceeccCCceeeeeecCC
Confidence 65 99999999876532323332 2 5567899998887777788999999765432 2111223567777888876
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.09 E-value=0.00011 Score=61.71 Aligned_cols=125 Identities=14% Similarity=0.060 Sum_probs=73.3
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEE--cCCCCceeeeeccCccceeee------eEEEecC-Cc-eEEEEe--CCcC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFD--ADNLHAKTMIPAHDSPLAALA------SLSVGTK-SG-YRLFSL--NSID 84 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd--~~~~~~~~~l~~H~~~V~~l~------~lasgs~-dg-iriwd~--~~~~ 84 (161)
..+.+++|||..|+.+... +|..+||. +.++. ...+..|.....+.+ .|+..++ +| ..||.+ .+++
T Consensus 242 ~~~~~~SPDG~~la~~~~~-~g~~~Iy~~d~~~~~-~~~lt~~~~~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~ 319 (427)
T PRK02889 242 NSAPAWSPDGRTLAVALSR-DGNSQIYTVNADGSG-LRRLTQSSGIDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA 319 (427)
T ss_pred ccceEECCCCCEEEEEEcc-CCCceEEEEECCCCC-cEECCCCCCCCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc
Confidence 3467789999988876553 78767665 44443 455655554444444 5554554 45 777765 3443
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCC---CCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSS---PRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~---d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
...+. .+.. ......|||++..++..+. +..|.+||+.+++.. .+..........|+||
T Consensus 320 -~~~lt-~~g~--~~~~~~~SpDG~~Ia~~s~~~g~~~I~v~d~~~g~~~-~lt~~~~~~~p~~spd 381 (427)
T PRK02889 320 -AQRVT-FTGS--YNTSPRISPDGKLLAYISRVGGAFKLYVQDLATGQVT-ALTDTTRDESPSFAPN 381 (427)
T ss_pred -eEEEe-cCCC--CcCceEECCCCCEEEEEEccCCcEEEEEEECCCCCeE-EccCCCCccCceECCC
Confidence 22221 1111 1234678998866654322 236999999988743 3433334567889888
|
|
| >KOG3914|consensus | Back alignment and domain information |
|---|
Probab=98.03 E-value=1e-05 Score=66.08 Aligned_cols=69 Identities=13% Similarity=0.167 Sum_probs=55.4
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceee-eeccCccceeee-----eEEEecCCc-eEEEEeCCcCce
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTM-IPAHDSPLAALA-----SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~-l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~~ 86 (161)
=+..++++||+..|+++-- |..|||=....---+.. .-||+.-|+.++ .|+|||-|+ +|+||.++|+.+
T Consensus 153 ml~dVavS~D~~~IitaDR--DEkIRvs~ypa~f~IesfclGH~eFVS~isl~~~~~LlS~sGD~tlr~Wd~~sgk~L 228 (390)
T KOG3914|consen 153 MLLDVAVSPDDQFIITADR--DEKIRVSRYPATFVIESFCLGHKEFVSTISLTDNYLLLSGSGDKTLRLWDITSGKLL 228 (390)
T ss_pred hhheeeecCCCCEEEEecC--CceEEEEecCcccchhhhccccHhheeeeeeccCceeeecCCCCcEEEEecccCCcc
Confidence 3668888999999998654 99999966554444444 459999999999 778899888 999999999876
|
|
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=98.01 E-value=4.9e-05 Score=61.34 Aligned_cols=129 Identities=12% Similarity=0.097 Sum_probs=82.8
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccc----eeee---eEEEecCCc-eEEEEeCCcCceee
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPL----AALA---SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V----~~l~---~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
.|+| +|+|+++|+.. +-.+-|=|.++-+..+.|.-= +.| +... .|.....|+ |.+|++..-+-..+
T Consensus 13 ~c~f--Sp~g~yiAs~~---~yrlviRd~~tlq~~qlf~cl-dki~yieW~ads~~ilC~~yk~~~vqvwsl~Qpew~ck 86 (447)
T KOG4497|consen 13 FCSF--SPCGNYIASLS---RYRLVIRDSETLQLHQLFLCL-DKIVYIEWKADSCHILCVAYKDPKVQVWSLVQPEWYCK 86 (447)
T ss_pred ceeE--CCCCCeeeeee---eeEEEEeccchhhHHHHHHHH-HHhhheeeeccceeeeeeeeccceEEEEEeecceeEEE
Confidence 4555 66999999865 567888888877654433210 001 1111 555677888 99999964332223
Q ss_pred EEeecCcceEEEEEeecCCeEEEE-ecCCCCeEEEEecCCCCeEEEEEe-cCceEEEEECCcEEEEEec
Q psy505 89 IYENSQEDVCIVERLFSSSLVAVV-SLSSPRKLTVCHFKRGSEICNYSF-SNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~fs~~~~~~~-s~~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~~~vv~~~ 155 (161)
+-+| ...+.+..|||++.-+. ...-|-.|.||.+.+.++. -+.| ...+..++|+||+-..++-
T Consensus 87 Ideg---~agls~~~WSPdgrhiL~tseF~lriTVWSL~t~~~~-~~~~pK~~~kg~~f~~dg~f~ai~ 151 (447)
T KOG4497|consen 87 IDEG---QAGLSSISWSPDGRHILLTSEFDLRITVWSLNTQKGY-LLPHPKTNVKGYAFHPDGQFCAIL 151 (447)
T ss_pred eccC---CCcceeeeECCCcceEeeeecceeEEEEEEeccceeE-EecccccCceeEEECCCCceeeee
Confidence 3333 33467788999995433 3345678999999988753 4456 4678999999996555443
|
|
| >PRK02889 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=98.01 E-value=0.00016 Score=60.63 Aligned_cols=129 Identities=15% Similarity=0.170 Sum_probs=72.4
Q ss_pred ceeEEeecCCCceEEEEcCCC-CcceEEEEEcCCCCceeeeeccCccceeee------eEE-EecCCc-eEEEEe--CCc
Q psy505 15 NGICCLCVNSDNCYLAYPGSN-SIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLS-VGTKSG-YRLFSL--NSI 83 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~-~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~la-sgs~dg-iriwd~--~~~ 83 (161)
..+.+.+++|||..|++.+.. ....|.+||+.+++... +....+.+.+.+ .|+ +.+.+| .+||.+ .++
T Consensus 196 ~~v~~p~wSPDG~~la~~s~~~~~~~I~~~dl~~g~~~~-l~~~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~d~~~~ 274 (427)
T PRK02889 196 EPIISPAWSPDGTKLAYVSFESKKPVVYVHDLATGRRRV-VANFKGSNSAPAWSPDGRTLAVALSRDGNSQIYTVNADGS 274 (427)
T ss_pred CCcccceEcCCCCEEEEEEccCCCcEEEEEECCCCCEEE-eecCCCCccceEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 346678889999999886542 02369999999887532 332223333333 444 567777 777764 443
Q ss_pred CceeeEEeecCcceEEEEEeecCCeEEEEecC-CCCeEEEE--ecCCCCeEEEEEec-CceEEEEECCcE
Q psy505 84 DTLEQIYENSQEDVCIVERLFSSSLVAVVSLS-SPRKLTVC--HFKRGSEICNYSFS-NTILAVKLNRKK 149 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~-~d~~i~iW--D~~~~~~i~~l~~~-~~V~~v~~~~~~ 149 (161)
. ..++ ..+.. ...+..|+||+..++..+ .++...|| |+..++ ...+.+. .......|+|++
T Consensus 275 ~-~~~l-t~~~~--~~~~~~wSpDG~~l~f~s~~~g~~~Iy~~~~~~g~-~~~lt~~g~~~~~~~~SpDG 339 (427)
T PRK02889 275 G-LRRL-TQSSG--IDTEPFFSPDGRSIYFTSDRGGAPQIYRMPASGGA-AQRVTFTGSYNTSPRISPDG 339 (427)
T ss_pred C-cEEC-CCCCC--CCcCeEEcCCCCEEEEEecCCCCcEEEEEECCCCc-eEEEecCCCCcCceEECCCC
Confidence 3 3233 22221 234567999886554322 22345566 445554 3444443 234467899873
|
|
| >PRK05137 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00019 Score=60.23 Aligned_cols=125 Identities=8% Similarity=-0.023 Sum_probs=76.0
Q ss_pred eEEeecCCCceEEEEcCCCCcce--EEEEEcCCCCceeeeeccCccceeee------eEEEecC-Cc---eEEEEeCCcC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGE--VQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTK-SG---YRLFSLNSID 84 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~--v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~-dg---iriwd~~~~~ 84 (161)
+.+.+++|||..|+++.+. +|. |.+||+.+++. ..+..|.....+.+ .++..++ +| |.+||+.+++
T Consensus 248 ~~~~~~SPDG~~la~~~~~-~g~~~Iy~~d~~~~~~-~~Lt~~~~~~~~~~~spDG~~i~f~s~~~g~~~Iy~~d~~g~~ 325 (435)
T PRK05137 248 TFAPRFSPDGRKVVMSLSQ-GGNTDIYTMDLRSGTT-TRLTDSPAIDTSPSYSPDGSQIVFESDRSGSPQLYVMNADGSN 325 (435)
T ss_pred ccCcEECCCCCEEEEEEec-CCCceEEEEECCCCce-EEccCCCCccCceeEcCCCCEEEEEECCCCCCeEEEEECCCCC
Confidence 4567789999988765543 554 77779987765 45665655444444 5555553 33 7777876654
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEec---CCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSL---SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~---~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
...+..+ .. ......|+|++..++.. .++..|.+||+..+. ...+.....+....|+||
T Consensus 326 -~~~lt~~-~~--~~~~~~~SpdG~~ia~~~~~~~~~~i~~~d~~~~~-~~~lt~~~~~~~p~~spD 387 (435)
T PRK05137 326 -PRRISFG-GG--RYSTPVWSPRGDLIAFTKQGGGQFSIGVMKPDGSG-ERILTSGFLVEGPTWAPN 387 (435)
T ss_pred -eEEeecC-CC--cccCeEECCCCCEEEEEEcCCCceEEEEEECCCCc-eEeccCCCCCCCCeECCC
Confidence 3333322 21 23456799987655432 223468999986554 344443345677889987
|
|
| >KOG2695|consensus | Back alignment and domain information |
|---|
Probab=97.93 E-value=1.7e-05 Score=64.19 Aligned_cols=71 Identities=18% Similarity=0.184 Sum_probs=51.5
Q ss_pred CceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCc---eeeeeccCccceeee--------eEEEecCCc-eEEEEe
Q psy505 14 PNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHA---KTMIPAHDSPLAALA--------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 14 ~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~---~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd~ 80 (161)
+..|+++-.=. +++.|.+++- +|.|++||++--++ +.++.||-+.-.=+- .++++++|- .|||.+
T Consensus 298 ~Ssvtslq~Lq~s~q~LmaS~M--~gkikLyD~R~~K~~~~V~qYeGHvN~~a~l~~~v~~eeg~I~s~GdDcytRiWsl 375 (425)
T KOG2695|consen 298 DSSVTSLQILQFSQQKLMASDM--TGKIKLYDLRATKCKKSVMQYEGHVNLSAYLPAHVKEEEGSIFSVGDDCYTRIWSL 375 (425)
T ss_pred CcchhhhhhhccccceEeeccC--cCceeEeeehhhhcccceeeeecccccccccccccccccceEEEccCeeEEEEEec
Confidence 44455554422 5567777676 89999999998777 888999954332211 777899999 999999
Q ss_pred CCcCce
Q psy505 81 NSIDTL 86 (161)
Q Consensus 81 ~~~~~~ 86 (161)
++|..+
T Consensus 376 ~~ghLl 381 (425)
T KOG2695|consen 376 DSGHLL 381 (425)
T ss_pred ccCcee
Confidence 988754
|
|
| >KOG1523|consensus | Back alignment and domain information |
|---|
Probab=97.92 E-value=9.5e-05 Score=59.27 Aligned_cols=149 Identities=8% Similarity=0.040 Sum_probs=104.4
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC---CceeeeeccCccceeee------eEEEecC
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL---HAKTMIPAHDSPLAALA------SLSVGTK 72 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~---~~~~~l~~H~~~V~~l~------~lasgs~ 72 (161)
++.||+ ..| ..-|.++..+|.+..|++++. |..-.||...++ ++.-.|.-|+...++|. .||+||.
T Consensus 46 ~~~htl-s~H--d~~vtgvdWap~snrIvtcs~--drnayVw~~~~~~~WkptlvLlRiNrAAt~V~WsP~enkFAVgSg 120 (361)
T KOG1523|consen 46 EPAHTL-SEH--DKIVTGVDWAPKSNRIVTCSH--DRNAYVWTQPSGGTWKPTLVLLRINRAATCVKWSPKENKFAVGSG 120 (361)
T ss_pred eeceeh-hhh--CcceeEEeecCCCCceeEccC--CCCccccccCCCCeeccceeEEEeccceeeEeecCcCceEEeccC
Confidence 456777 333 334667788888889998775 999999998444 34455667888899998 9999998
Q ss_pred Cc-eEEEEeCCcCce---eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecC-----C-------------CCe
Q psy505 73 SG-YRLFSLNSIDTL---EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK-----R-------------GSE 130 (161)
Q Consensus 73 dg-iriwd~~~~~~~---~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~-----~-------------~~~ 130 (161)
-. |-||-.+..+.= +.+-..+. ..|.++.|.||...++.|+.|+.++|+..- . |++
T Consensus 121 ar~isVcy~E~ENdWWVsKhikkPir--Stv~sldWhpnnVLlaaGs~D~k~rVfSayIK~Vdekpap~pWgsk~PFG~l 198 (361)
T KOG1523|consen 121 ARLISVCYYEQENDWWVSKHIKKPIR--STVTSLDWHPNNVLLAAGSTDGKCRVFSAYIKGVDEKPAPTPWGSKMPFGQL 198 (361)
T ss_pred ccEEEEEEEecccceehhhhhCCccc--cceeeeeccCCcceecccccCcceeEEEEeeeccccCCCCCCCccCCcHHHH
Confidence 88 888877543211 00111222 357899999999999999999999998532 1 234
Q ss_pred EEEEE-ecCceEEEEECCc--EEEEEeccc
Q psy505 131 ICNYS-FSNTILAVKLNRK--KEEEEDEEE 157 (161)
Q Consensus 131 i~~l~-~~~~V~~v~~~~~--~~vv~~~~~ 157 (161)
+.++. -.+.|.+|.|+|+ +|+-|..++
T Consensus 199 m~E~~~~ggwvh~v~fs~sG~~lawv~Hds 228 (361)
T KOG1523|consen 199 MSEASSSGGWVHGVLFSPSGNRLAWVGHDS 228 (361)
T ss_pred HHhhccCCCceeeeEeCCCCCEeeEecCCC
Confidence 55553 3578999999976 566565553
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=97.88 E-value=1.1e-05 Score=72.03 Aligned_cols=141 Identities=13% Similarity=0.178 Sum_probs=92.6
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc----------
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG---------- 74 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg---------- 74 (161)
.+..+..+.+|+.+...|+.+.. .|.|+++++.+|........|.++|+-+. +|.+++...
T Consensus 1099 d~~~~fTc~afs~~~~hL~vG~~--~Geik~~nv~sG~~e~s~ncH~SavT~vePs~dgs~~Ltsss~S~PlsaLW~~~s 1176 (1516)
T KOG1832|consen 1099 DETALFTCIAFSGGTNHLAVGSH--AGEIKIFNVSSGSMEESVNCHQSAVTLVEPSVDGSTQLTSSSSSSPLSALWDASS 1176 (1516)
T ss_pred ccccceeeEEeecCCceEEeeec--cceEEEEEccCccccccccccccccccccccCCcceeeeeccccCchHHHhcccc
Confidence 34456667777778888988665 79999999999999999999999998554 222222221
Q ss_pred -------------------------------eEEEEeCCcCceeeEEeecCc-ceEEEEEeecCCeEEEEecCCCCeEEE
Q psy505 75 -------------------------------YRLFSLNSIDTLEQIYENSQE-DVCIVERLFSSSLVAVVSLSSPRKLTV 122 (161)
Q Consensus 75 -------------------------------iriwd~~~~~~~~~~~~~~~~-~~~v~~~~fs~~~~~~~s~~~d~~i~i 122 (161)
.-|||++|+.++...+.+... ...-....|||....+. .|+ .+
T Consensus 1177 ~~~~~Hsf~ed~~vkFsn~~q~r~~gt~~d~a~~YDvqT~~~l~tylt~~~~~~y~~n~a~FsP~D~LIl---ndG--vL 1251 (1516)
T KOG1832|consen 1177 TGGPRHSFDEDKAVKFSNSLQFRALGTEADDALLYDVQTCSPLQTYLTDTVTSSYSNNLAHFSPCDTLIL---NDG--VL 1251 (1516)
T ss_pred ccCccccccccceeehhhhHHHHHhcccccceEEEecccCcHHHHhcCcchhhhhhccccccCCCcceEe---eCc--ee
Confidence 456666666555443433221 11123456887655444 233 58
Q ss_pred EecCCCCeEEEEE-ecCceEEEEECCcEEEEEeccceee
Q psy505 123 CHFKRGSEICNYS-FSNTILAVKLNRKKEEEEDEEEEKK 160 (161)
Q Consensus 123 WD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~~~~~ 160 (161)
||++..+.|..|. |..... =.|+|.++-|+...+|+.
T Consensus 1252 WDvR~~~aIh~FD~ft~~~~-G~FHP~g~eVIINSEIwD 1289 (1516)
T KOG1832|consen 1252 WDVRIPEAIHRFDQFTDYGG-GGFHPSGNEVIINSEIWD 1289 (1516)
T ss_pred eeeccHHHHhhhhhheeccc-ccccCCCceEEeechhhh
Confidence 9999888887774 553333 358999998888888764
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00038 Score=58.57 Aligned_cols=126 Identities=10% Similarity=0.024 Sum_probs=74.9
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEc--CC-CCceeeeeccCccceeee------eEEEec-CCc---eEEEEeCCcC
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDA--DN-LHAKTMIPAHDSPLAALA------SLSVGT-KSG---YRLFSLNSID 84 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~--~~-~~~~~~l~~H~~~V~~l~------~lasgs-~dg---iriwd~~~~~ 84 (161)
...+++|||..|++.+.. +|..+||.+ .. +.....+..+...+.... .|+..+ .+| |.+||+.+++
T Consensus 284 ~~p~wSPDG~~Laf~s~~-~g~~~ly~~~~~~~g~~~~~lt~~~~~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~ 362 (428)
T PRK01029 284 GNPSFSPDGTRLVFVSNK-DGRPRIYIMQIDPEGQSPRLLTKKYRNSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGR 362 (428)
T ss_pred CCeEECCCCCEEEEEECC-CCCceEEEEECcccccceEEeccCCCCccceeECCCCCEEEEEEcCCCCcEEEEEECCCCC
Confidence 356778999999887764 776666654 32 233455555444444443 455433 333 8999998876
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEE--ec-CCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVV--SL-SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~--s~-~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
.. .+..+. ..+....|+||+..++ +. .....|.+||+..++..........+...+|+|-
T Consensus 363 ~~-~Lt~~~---~~~~~p~wSpDG~~L~f~~~~~g~~~L~~vdl~~g~~~~Lt~~~g~~~~p~Ws~~ 425 (428)
T PRK01029 363 DY-QLTTSP---ENKESPSWAIDSLHLVYSAGNSNESELYLISLITKKTRKIVIGSGEKRFPSWGAF 425 (428)
T ss_pred eE-EccCCC---CCccceEECCCCCEEEEEECCCCCceEEEEECCCCCEEEeecCCCcccCceecCC
Confidence 42 332221 1245678999875444 22 2345799999988875433333455666777763
|
|
| >KOG4714|consensus | Back alignment and domain information |
|---|
Probab=97.83 E-value=4.3e-05 Score=59.84 Aligned_cols=65 Identities=17% Similarity=0.178 Sum_probs=49.3
Q ss_pred ceeee-------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCC
Q psy505 61 LAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKR 127 (161)
Q Consensus 61 V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~ 127 (161)
|.+++ ++++|++|| +-+||.+...+...++..|.. .+.++.|+| +.--+..+++|+.+.-||..+
T Consensus 182 v~~l~~hp~qq~~v~cgt~dg~~~l~d~rn~~~p~S~l~ahk~--~i~eV~FHpk~p~~Lft~sedGslw~wdas~ 255 (319)
T KOG4714|consen 182 VTALCSHPAQQHLVCCGTDDGIVGLWDARNVAMPVSLLKAHKA--EIWEVHFHPKNPEHLFTCSEDGSLWHWDAST 255 (319)
T ss_pred chhhhCCcccccEEEEecCCCeEEEEEcccccchHHHHHHhhh--hhhheeccCCCchheeEecCCCcEEEEcCCC
Confidence 77777 899999999 999999987666556666653 477888986 333344445789999999874
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00087 Score=55.96 Aligned_cols=126 Identities=17% Similarity=0.135 Sum_probs=73.3
Q ss_pred eeEEeecCCCceEEEEcCCCCc--ceEEEEEcCCCCceeeeeccCccceeee------eEE-EecCCc---eEEEEeCCc
Q psy505 16 GICCLCVNSDNCYLAYPGSNSI--GEVQIFDADNLHAKTMIPAHDSPLAALA------SLS-VGTKSG---YRLFSLNSI 83 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~d--g~v~iWd~~~~~~~~~l~~H~~~V~~l~------~la-sgs~dg---iriwd~~~~ 83 (161)
.+...+++|||..|++.+.. + ..|.+||+.+++... +....+.+...+ .|+ +.+.+| |.+||++++
T Consensus 200 ~~~~p~wSpDG~~la~~s~~-~~~~~l~~~~l~~g~~~~-l~~~~g~~~~~~~SpDG~~la~~~~~~g~~~Iy~~d~~~~ 277 (430)
T PRK00178 200 PILSPRWSPDGKRIAYVSFE-QKRPRIFVQNLDTGRREQ-ITNFEGLNGAPAWSPDGSKLAFVLSKDGNPEIYVMDLASR 277 (430)
T ss_pred ceeeeeECCCCCEEEEEEcC-CCCCEEEEEECCCCCEEE-ccCCCCCcCCeEECCCCCEEEEEEccCCCceEEEEECCCC
Confidence 35677889999999886642 3 368999999886533 222222222222 443 444454 778899887
Q ss_pred CceeeEEeecCcceEEEEEeecCCeEEE--Eec-CCCCeEEEEecCCCCeEEEEEec-CceEEEEECCc
Q psy505 84 DTLEQIYENSQEDVCIVERLFSSSLVAV--VSL-SSPRKLTVCHFKRGSEICNYSFS-NTILAVKLNRK 148 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~~~~~~--~s~-~~d~~i~iWD~~~~~~i~~l~~~-~~V~~v~~~~~ 148 (161)
+. .++. .+.. ......|+|++..+ .+. ..+..|.++|+.+++. ..+.+. .......|+|+
T Consensus 278 ~~-~~lt-~~~~--~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~-~~lt~~~~~~~~~~~Spd 341 (430)
T PRK00178 278 QL-SRVT-NHPA--IDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRA-ERVTFVGNYNARPRLSAD 341 (430)
T ss_pred Ce-EEcc-cCCC--CcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEeecCCCCccceEECCC
Confidence 53 2332 2221 23456789876544 332 1233688889988874 444443 23345678887
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.81 E-value=0.0006 Score=57.67 Aligned_cols=126 Identities=15% Similarity=0.148 Sum_probs=72.5
Q ss_pred eEEeecCCCceEEEEcCCCCcc--eEEEEEcCCCCc--eeeeeccCc-cceeee--eE-EEecCCc---eEEEEeCCcCc
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIG--EVQIFDADNLHA--KTMIPAHDS-PLAALA--SL-SVGTKSG---YRLFSLNSIDT 85 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg--~v~iWd~~~~~~--~~~l~~H~~-~V~~l~--~l-asgs~dg---iriwd~~~~~~ 85 (161)
+....++|||..|++.... +| .|.+||+.+++. +..+.++.. +.++=. .| .+.+.+| |.+||+++++.
T Consensus 220 ~~~p~wSPDG~~La~~s~~-~g~~~L~~~dl~tg~~~~lt~~~g~~~~~~wSPDG~~La~~~~~~g~~~Iy~~dl~tg~~ 298 (448)
T PRK04792 220 LMSPAWSPDGRKLAYVSFE-NRKAEIFVQDIYTQVREKVTSFPGINGAPRFSPDGKKLALVLSKDGQPEIYVVDIATKAL 298 (448)
T ss_pred ccCceECCCCCEEEEEEec-CCCcEEEEEECCCCCeEEecCCCCCcCCeeECCCCCEEEEEEeCCCCeEEEEEECCCCCe
Confidence 4466779999999986542 33 588899988764 233333322 111111 34 3455566 77778877653
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEE--ec-CCCCeEEEEecCCCCeEEEEEec-CceEEEEECCc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVV--SL-SSPRKLTVCHFKRGSEICNYSFS-NTILAVKLNRK 148 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~--s~-~~d~~i~iWD~~~~~~i~~l~~~-~~V~~v~~~~~ 148 (161)
.++.. +.. ......|+|++..++ +. .....|.++|+.+++. ..+.+. .......|+||
T Consensus 299 -~~lt~-~~~--~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~-~~Lt~~g~~~~~~~~SpD 360 (448)
T PRK04792 299 -TRITR-HRA--IDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV-SRLTFEGEQNLGGSITPD 360 (448)
T ss_pred -EECcc-CCC--CccceEECCCCCEEEEEECCCCCceEEEEECCCCCE-EEEecCCCCCcCeeECCC
Confidence 23322 221 234667998875443 32 1234577789888774 445442 23445688887
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=97.80 E-value=8.5e-05 Score=62.40 Aligned_cols=133 Identities=10% Similarity=0.072 Sum_probs=89.7
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee--------eEEEecCCc-eEEEEeC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA--------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~--------~lasgs~dg-iriwd~~ 81 (161)
+++-.|..+.|+..|..+++++. |..|.+||..+++.+..|. ||...|-.-. .+++++.|| +|+=.+.
T Consensus 140 ~H~GcVntV~FN~~Gd~l~SgSD--D~~vv~WdW~~~~~~l~f~SGH~~NvfQaKFiP~s~d~ti~~~s~dgqvr~s~i~ 217 (559)
T KOG1334|consen 140 KHKGCVNTVHFNQRGDVLASGSD--DLQVVVWDWVSGSPKLSFESGHCNNVFQAKFIPFSGDRTIVTSSRDGQVRVSEIL 217 (559)
T ss_pred CCCCccceeeecccCceeeccCc--cceEEeehhhccCcccccccccccchhhhhccCCCCCcCceeccccCceeeeeec
Confidence 56667889999999999998665 9999999999998776664 7888775433 788999999 9988754
Q ss_pred CcCceee--EEeecCcceEEEEE-eecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe----cC---ceEEEEECCc
Q psy505 82 SIDTLEQ--IYENSQEDVCIVER-LFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF----SN---TILAVKLNRK 148 (161)
Q Consensus 82 ~~~~~~~--~~~~~~~~~~v~~~-~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~----~~---~V~~v~~~~~ 148 (161)
....+.. ....|.+++....+ -++|.-+ .|+++|+.+.=.|++++.+-..+.. .. .-.+++.+|.
T Consensus 218 ~t~~~e~t~rl~~h~g~vhklav~p~sp~~f--~S~geD~~v~~~Dlr~~~pa~~~~cr~~~~~~~v~L~~Ia~~P~ 292 (559)
T KOG1334|consen 218 ETGYVENTKRLAPHEGPVHKLAVEPDSPKPF--LSCGEDAVVFHIDLRQDVPAEKFVCREADEKERVGLYTIAVDPR 292 (559)
T ss_pred cccceecceecccccCccceeeecCCCCCcc--cccccccceeeeeeccCCccceeeeeccCCccceeeeeEecCCC
Confidence 3222221 12234444444333 2345544 4555788899899998876555432 22 3456777664
|
|
| >TIGR02800 propeller_TolB tol-pal system beta propeller repeat protein TolB | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.00048 Score=56.89 Aligned_cols=125 Identities=11% Similarity=0.069 Sum_probs=71.7
Q ss_pred eEEeecCCCceEEEEcCCCCcc--eEEEEEcCCCCceeeeeccCccceeee------eEEEecC-Cc---eEEEEeCCcC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIG--EVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTK-SG---YRLFSLNSID 84 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg--~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~-dg---iriwd~~~~~ 84 (161)
..+++++|||..++++... +| .|.+||+.+++. ..+..|.......+ .|+..++ ++ |.+||+.+++
T Consensus 236 ~~~~~~spDg~~l~~~~~~-~~~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~s~dg~~l~~~s~~~g~~~iy~~d~~~~~ 313 (417)
T TIGR02800 236 NGAPAFSPDGSKLAVSLSK-DGNPDIYVMDLDGKQL-TRLTNGPGIDTEPSWSPDGKSIAFTSDRGGSPQIYMMDADGGE 313 (417)
T ss_pred ccceEECCCCCEEEEEECC-CCCccEEEEECCCCCE-EECCCCCCCCCCEEECCCCCEEEEEECCCCCceEEEEECCCCC
Confidence 3456778999888765442 44 588999987754 34444443333322 5554444 33 6666776654
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCC---eEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPR---KLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~---~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
.. .+ ..+. .......|+|++..++....++ .|.+||+.++.. ..+..........|+|+
T Consensus 314 ~~-~l-~~~~--~~~~~~~~spdg~~i~~~~~~~~~~~i~~~d~~~~~~-~~l~~~~~~~~p~~spd 375 (417)
T TIGR02800 314 VR-RL-TFRG--GYNASPSWSPDGDLIAFVHREGGGFNIAVMDLDGGGE-RVLTDTGLDESPSFAPN 375 (417)
T ss_pred EE-Ee-ecCC--CCccCeEECCCCCEEEEEEccCCceEEEEEeCCCCCe-EEccCCCCCCCceECCC
Confidence 32 22 2222 1245667898876555433333 699999987653 33332223445678877
|
The Tol-PAL system is required for bacterial outer membrane integrity. E. coli TolB is involved in the tonB-independent uptake of group A colicins (colicins A, E1, E2, E3 and K), and is necessary for the colicins to reach their respective targets after initial binding to the bacteria. It is also involved in uptake of filamentous DNA. Study of its structure suggest that the TolB protein might be involved in the recycling of peptidoglycan or in its covalent linking with lipoproteins. The Tol-Pal system is also implicated in pathogenesis of E. coli, Haemophilus ducreyi, Salmonella enterica and Vibrio cholerae, but the mechanism(s) is unclear. |
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.0005 Score=63.91 Aligned_cols=110 Identities=7% Similarity=0.053 Sum_probs=68.2
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeec-------------cCc--------cceeee------eEEEe
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA-------------HDS--------PLAALA------SLSVG 70 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~-------------H~~--------~V~~l~------~lasg 70 (161)
..++++|||..|..+... ++.|++||+.++......-+ +.+ .-.+++ ++++-
T Consensus 743 ~GIavspdG~~LYVADs~-n~~Irv~D~~tg~~~~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVAD 821 (1057)
T PLN02919 743 SGISLSPDLKELYIADSE-SSSIRALDLKTGGSRLLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVAD 821 (1057)
T ss_pred cEEEEeCCCCEEEEEECC-CCeEEEEECCCCcEEEEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEE
Confidence 357778888755444442 78999999987653211000 000 012333 55556
Q ss_pred cCCc-eEEEEeCCcCceeeEEeecCc-----------c-eEEEEEeecCCeEEEEecCCCCeEEEEecCCCCe
Q psy505 71 TKSG-YRLFSLNSIDTLEQIYENSQE-----------D-VCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE 130 (161)
Q Consensus 71 s~dg-iriwd~~~~~~~~~~~~~~~~-----------~-~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~ 130 (161)
+.++ |++||..++... .+ .+... . ..-..+++++++..+++.+.+++|++||+++++.
T Consensus 822 s~N~rIrviD~~tg~v~-ti-aG~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irvid~~~~~~ 892 (1057)
T PLN02919 822 SYNHKIKKLDPATKRVT-TL-AGTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRYLDLNKGEA 892 (1057)
T ss_pred CCCCEEEEEECCCCeEE-EE-eccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEEEECCCCcc
Confidence 6666 999999876432 22 22110 0 0134678889888888888899999999999875
|
|
| >PRK01029 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00082 Score=56.56 Aligned_cols=127 Identities=10% Similarity=0.083 Sum_probs=70.4
Q ss_pred EeecCCCceEEEEcCCC---CcceEEEEEcCCC---CceeeeeccCccceeee------eEEEec-CCc-eEEEEeC--C
Q psy505 19 CLCVNSDNCYLAYPGSN---SIGEVQIFDADNL---HAKTMIPAHDSPLAALA------SLSVGT-KSG-YRLFSLN--S 82 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~---~dg~v~iWd~~~~---~~~~~l~~H~~~V~~l~------~lasgs-~dg-iriwd~~--~ 82 (161)
..+++|||+.||+.+.. .|..+.+||+.++ +......++.......+ .|+..+ .+| .+||.+. .
T Consensus 235 ~p~wSPDG~~Laf~s~~~g~~di~~~~~~~~~g~~g~~~~lt~~~~~~~~~p~wSPDG~~Laf~s~~~g~~~ly~~~~~~ 314 (428)
T PRK01029 235 MPTFSPRKKLLAFISDRYGNPDLFIQSFSLETGAIGKPRRLLNEAFGTQGNPSFSPDGTRLVFVSNKDGRPRIYIMQIDP 314 (428)
T ss_pred ceEECCCCCEEEEEECCCCCcceeEEEeecccCCCCcceEeecCCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECcc
Confidence 56678999999886542 0234555787753 33333323222222223 555554 456 6677542 1
Q ss_pred -cCceeeEEeecCcceEEEEEeecCCeEEEEecC---CCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE
Q psy505 83 -IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS---SPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK 149 (161)
Q Consensus 83 -~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~---~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~ 149 (161)
+... +.+..+.. .+....|||++..++..+ ....|.+||+.+++.. .+. ....+.+..|+||+
T Consensus 315 ~g~~~-~~lt~~~~--~~~~p~wSPDG~~Laf~~~~~g~~~I~v~dl~~g~~~-~Lt~~~~~~~~p~wSpDG 382 (428)
T PRK01029 315 EGQSP-RLLTKKYR--NSSCPAWSPDGKKIAFCSVIKGVRQICVYDLATGRDY-QLTTSPENKESPSWAIDS 382 (428)
T ss_pred cccce-EEeccCCC--CccceeECCCCCEEEEEEcCCCCcEEEEEECCCCCeE-EccCCCCCccceEECCCC
Confidence 1212 22222221 244677999886555321 2346999999998763 343 33467788999983
|
|
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=97.73 E-value=5.4e-05 Score=71.70 Aligned_cols=124 Identities=9% Similarity=0.075 Sum_probs=88.7
Q ss_pred eEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeeee----EEEec---CCc-e
Q psy505 4 LHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALAS----LSVGT---KSG-Y 75 (161)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~~----lasgs---~dg-i 75 (161)
+.++ ++..+ ..|....|+.+|.-...+-. ||.+-+|... -++....+-|....++..+ +|+++ +++ +
T Consensus 2243 v~~~-rt~g~-s~vtr~~f~~qGnk~~i~d~--dg~l~l~q~~-pk~~~s~qchnk~~~Df~Fi~s~~~tag~s~d~~n~ 2317 (2439)
T KOG1064|consen 2243 VVCF-RTAGN-SRVTRSRFNHQGNKFGIVDG--DGDLSLWQAS-PKPYTSWQCHNKALSDFRFIGSLLATAGRSSDNRNV 2317 (2439)
T ss_pred EEEe-eccCc-chhhhhhhcccCCceeeecc--CCceeecccC-CcceeccccCCccccceeeeehhhhccccCCCCCcc
Confidence 4455 55555 56778888888877776544 9999999987 5666778889988888873 34333 345 9
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY 134 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l 134 (161)
.+||.---.+..-+...|.++ +..++|-|+...+.||+.++.|+|||++.++.+..+
T Consensus 2318 ~lwDtl~~~~~s~v~~~H~~g--aT~l~~~P~~qllisggr~G~v~l~D~rqrql~h~~ 2374 (2439)
T KOG1064|consen 2318 CLWDTLLPPMNSLVHTCHDGG--ATVLAYAPKHQLLISGGRKGEVCLFDIRQRQLRHTF 2374 (2439)
T ss_pred cchhcccCcccceeeeecCCC--ceEEEEcCcceEEEecCCcCcEEEeehHHHHHHHHh
Confidence 999964322222233456554 556789999999999999999999999987765443
|
|
| >PLN02919 haloacid dehalogenase-like hydrolase family protein | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.002 Score=59.95 Aligned_cols=137 Identities=7% Similarity=0.026 Sum_probs=79.5
Q ss_pred EeecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeecc---------C------ccceeee-------eEEEecCCc-
Q psy505 19 CLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAH---------D------SPLAALA-------SLSVGTKSG- 74 (161)
Q Consensus 19 ~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H---------~------~~V~~l~-------~lasgs~dg- 74 (161)
.++++| ++...++-.. ++.|++||..++... .+.+. . ...++++ ++++-+.++
T Consensus 687 gVa~dp~~g~LyVad~~--~~~I~v~d~~~g~v~-~~~G~G~~~~~~g~~~~~~~~~~P~GIavspdG~~LYVADs~n~~ 763 (1057)
T PLN02919 687 DVCFEPVNEKVYIAMAG--QHQIWEYNISDGVTR-VFSGDGYERNLNGSSGTSTSFAQPSGISLSPDLKELYIADSESSS 763 (1057)
T ss_pred EEEEecCCCeEEEEECC--CCeEEEEECCCCeEE-EEecCCccccCCCCccccccccCccEEEEeCCCCEEEEEECCCCe
Confidence 456677 4555555443 789999999876542 22221 1 1122343 445555666
Q ss_pred eEEEEeCCcCceeeEEee-c------------Ccce-------EEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE
Q psy505 75 YRLFSLNSIDTLEQIYEN-S------------QEDV-------CIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY 134 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~-~------------~~~~-------~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l 134 (161)
|++||++++... ...+ . .+.. .-..+++++++...++.+.+++|++||..++......
T Consensus 764 Irv~D~~tg~~~--~~~gg~~~~~~~l~~fG~~dG~g~~~~l~~P~Gvavd~dG~LYVADs~N~rIrviD~~tg~v~tia 841 (1057)
T PLN02919 764 IRALDLKTGGSR--LLAGGDPTFSDNLFKFGDHDGVGSEVLLQHPLGVLCAKDGQIYVADSYNHKIKKLDPATKRVTTLA 841 (1057)
T ss_pred EEEEECCCCcEE--EEEecccccCcccccccCCCCchhhhhccCCceeeEeCCCcEEEEECCCCEEEEEECCCCeEEEEe
Confidence 999999876421 1111 0 0000 0136778888877787778899999999887755332
Q ss_pred Eec--------------CceEEEEECCcEEEEEec---cceee
Q psy505 135 SFS--------------NTILAVKLNRKKEEEEDE---EEEKK 160 (161)
Q Consensus 135 ~~~--------------~~V~~v~~~~~~~vv~~~---~~~~~ 160 (161)
... +...++++++++-+.|.+ ++|++
T Consensus 842 G~G~~G~~dG~~~~a~l~~P~GIavd~dG~lyVaDt~Nn~Irv 884 (1057)
T PLN02919 842 GTGKAGFKDGKALKAQLSEPAGLALGENGRLFVADTNNSLIRY 884 (1057)
T ss_pred ccCCcCCCCCcccccccCCceEEEEeCCCCEEEEECCCCEEEE
Confidence 210 246778898874444433 34554
|
|
| >KOG0280|consensus | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00015 Score=57.65 Aligned_cols=75 Identities=13% Similarity=0.141 Sum_probs=55.0
Q ss_pred CCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcC-CCCceee-eeccCccceeee-------eEEEecCCc-eEEE
Q psy505 9 DTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDAD-NLHAKTM-IPAHDSPLAALA-------SLSVGTKSG-YRLF 78 (161)
Q Consensus 9 ~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~-~~~~~~~-l~~H~~~V~~l~-------~lasgs~dg-iriw 78 (161)
+.|.-+.-++.|. .....++++|+. ||.+.-||.+ .++.+.. .+-|...|.++. ++++||-|- |++|
T Consensus 162 k~He~E~Wta~f~--~~~pnlvytGgD-D~~l~~~D~R~p~~~i~~n~kvH~~GV~SI~ss~~~~~~I~TGsYDe~i~~~ 238 (339)
T KOG0280|consen 162 KVHEFEAWTAKFS--DKEPNLVYTGGD-DGSLSCWDIRIPKTFIWHNSKVHTSGVVSIYSSPPKPTYIATGSYDECIRVL 238 (339)
T ss_pred cccceeeeeeecc--cCCCceEEecCC-CceEEEEEecCCcceeeecceeeecceEEEecCCCCCceEEEeccccceeee
Confidence 4444444444544 344467777774 9999999999 5555544 678999999998 999999988 9999
Q ss_pred EeCC-cCce
Q psy505 79 SLNS-IDTL 86 (161)
Q Consensus 79 d~~~-~~~~ 86 (161)
|+++ ++++
T Consensus 239 DtRnm~kPl 247 (339)
T KOG0280|consen 239 DTRNMGKPL 247 (339)
T ss_pred ehhcccCcc
Confidence 9984 5554
|
|
| >PRK00178 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=0.0011 Score=55.36 Aligned_cols=123 Identities=13% Similarity=0.092 Sum_probs=69.8
Q ss_pred EeecCCCceEEEEcCCCCcc--eEEEEEcCCCCceeeeeccCccceeee------eEEEec-CCc---eEEEEeCCcCce
Q psy505 19 CLCVNSDNCYLAYPGSNSIG--EVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGT-KSG---YRLFSLNSIDTL 86 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg--~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs-~dg---iriwd~~~~~~~ 86 (161)
+.+++|||..|+++... +| .|.+||+.+++. ..+..+........ .++..+ .+| |.++|+.+++..
T Consensus 247 ~~~~SpDG~~la~~~~~-~g~~~Iy~~d~~~~~~-~~lt~~~~~~~~~~~spDg~~i~f~s~~~g~~~iy~~d~~~g~~~ 324 (430)
T PRK00178 247 APAWSPDGSKLAFVLSK-DGNPEIYVMDLASRQL-SRVTNHPAIDTEPFWGKDGRTLYFTSDRGGKPQIYKVNVNGGRAE 324 (430)
T ss_pred CeEECCCCCEEEEEEcc-CCCceEEEEECCCCCe-EEcccCCCCcCCeEECCCCCEEEEEECCCCCceEEEEECCCCCEE
Confidence 56778999988865442 44 688889998764 34554544333333 444334 344 666677776532
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecC---CCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLS---SPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~---~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
...+.+. ......|+|++..++-.+ ....|.+||+.+++. ..+..........|+|+
T Consensus 325 ~lt~~~~----~~~~~~~Spdg~~i~~~~~~~~~~~l~~~dl~tg~~-~~lt~~~~~~~p~~spd 384 (430)
T PRK00178 325 RVTFVGN----YNARPRLSADGKTLVMVHRQDGNFHVAAQDLQRGSV-RILTDTSLDESPSVAPN 384 (430)
T ss_pred EeecCCC----CccceEECCCCCEEEEEEccCCceEEEEEECCCCCE-EEccCCCCCCCceECCC
Confidence 1122221 122456888765554321 123588999998864 34443222234578887
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.0012 Score=52.22 Aligned_cols=135 Identities=10% Similarity=0.150 Sum_probs=77.3
Q ss_pred CCCCCCceeEE----eecCC-----CceEEEEcCCCCcceEEEEEcCCCCc-eeeeeccCccceeee-------eEEEec
Q psy505 9 DTPPNPNGICC----LCVNS-----DNCYLAYPGSNSIGEVQIFDADNLHA-KTMIPAHDSPLAALA-------SLSVGT 71 (161)
Q Consensus 9 ~~~~~~~~v~~----~~~~~-----d~~~la~~g~~~dg~v~iWd~~~~~~-~~~l~~H~~~V~~l~-------~lasgs 71 (161)
..++|+.|+.. +.|-| ..-+||.+|. -|..++|.+.+.+- .+.-.-|...|.=+. -+.-++
T Consensus 58 ~~y~N~~~iv~~y~g~~F~p~s~~~kc~~la~gG~--~g~fd~~~~~tn~~h~~~cd~snn~v~~~~r~cd~~~~~~i~s 135 (344)
T KOG4532|consen 58 SHYSNPKGIVEFYTGMTFTPGSFINKCVTLADGGA--SGQFDLFACNTNDGHLYQCDVSNNDVTLVKRYCDLKFPLNIAS 135 (344)
T ss_pred cccCCchhhEEeeecccccchHhhccccEEEeccc--cceeeeecccCcccceeeecccccchhhhhhhcccccceeecc
Confidence 44678877663 34444 2347888776 79999999997653 344455655443221 344466
Q ss_pred CCc-eEEEEeCCcCceeeEEeecCcceEEE---------------------------------------------EEeec
Q psy505 72 KSG-YRLFSLNSIDTLEQIYENSQEDVCIV---------------------------------------------ERLFS 105 (161)
Q Consensus 72 ~dg-iriwd~~~~~~~~~~~~~~~~~~~v~---------------------------------------------~~~fs 105 (161)
.|. +|+++++-+.. .. .-|...+... +..|+
T Consensus 136 ndht~k~~~~~~~s~-~~--~~h~~~~~~ns~~~snd~~~~~~Vgds~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s 212 (344)
T KOG4532|consen 136 NDHTGKTMVVSGDSN-KF--AVHNQNLTQNSLHYSNDPSWGSSVGDSRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFS 212 (344)
T ss_pred CCcceeEEEEecCcc-cc--eeeccccceeeeEEcCCCceEEEecCCCcceEEEeCCccceeeeeEecccCCCceeeeec
Confidence 777 88888753321 00 0011001111 12344
Q ss_pred CCeEEEEecCCCCeEEEEecCCCC-eEEEEE-----ecCceEEEEECCc
Q psy505 106 SSLVAVVSLSSPRKLTVCHFKRGS-EICNYS-----FSNTILAVKLNRK 148 (161)
Q Consensus 106 ~~~~~~~s~~~d~~i~iWD~~~~~-~i~~l~-----~~~~V~~v~~~~~ 148 (161)
.+...+|.+..|+++-|||++.-. ++.+.+ |.+.|..++|++.
T Consensus 213 ~~~~~FAv~~Qdg~~~I~DVR~~~tpm~~~sstrp~hnGa~R~c~Fsl~ 261 (344)
T KOG4532|consen 213 ENDLQFAVVFQDGTCAIYDVRNMATPMAEISSTRPHHNGAFRVCRFSLY 261 (344)
T ss_pred cCcceEEEEecCCcEEEEEecccccchhhhcccCCCCCCceEEEEecCC
Confidence 444444555678899999998743 332322 4578999999864
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.0046 Score=50.63 Aligned_cols=118 Identities=13% Similarity=0.009 Sum_probs=74.2
Q ss_pred cceEEEEEcCCCCceeeeec--cCccceeee--eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEE
Q psy505 37 IGEVQIFDADNLHAKTMIPA--HDSPLAALA--SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAV 111 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~--H~~~V~~l~--~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~ 111 (161)
+|.+..||..+|+.+..... ...++ +. .+..++.|| +..+|..+|+.+-+. ....+. ...+.....+.+++
T Consensus 250 ~g~l~a~d~~tG~~~W~~~~~~~~~p~--~~~~~vyv~~~~G~l~~~d~~tG~~~W~~-~~~~~~-~~ssp~i~g~~l~~ 325 (377)
T TIGR03300 250 QGRVAALDLRSGRVLWKRDASSYQGPA--VDDNRLYVTDADGVVVALDRRSGSELWKN-DELKYR-QLTAPAVVGGYLVV 325 (377)
T ss_pred CCEEEEEECCCCcEEEeeccCCccCce--EeCCEEEEECCCCeEEEEECCCCcEEEcc-ccccCC-ccccCEEECCEEEE
Confidence 89999999999988776652 11121 22 666778888 999999998754221 111111 11111223344433
Q ss_pred EecCCCCeEEEEecCCCCeEEEEEecC-ce-EEEEECCcEEEEEecc-ceee
Q psy505 112 VSLSSPRKLTVCHFKRGSEICNYSFSN-TI-LAVKLNRKKEEEEDEE-EEKK 160 (161)
Q Consensus 112 ~s~~~d~~i~iWD~~~~~~i~~l~~~~-~V-~~v~~~~~~~vv~~~~-~~~~ 160 (161)
. +.++.|.++|.++|+.+.++...+ .+ .+-.+..++++++..+ +++.
T Consensus 326 ~--~~~G~l~~~d~~tG~~~~~~~~~~~~~~~sp~~~~~~l~v~~~dG~l~~ 375 (377)
T TIGR03300 326 G--DFEGYLHWLSREDGSFVARLKTDGSGIASPPVVVGDGLLVQTRDGDLYA 375 (377)
T ss_pred E--eCCCEEEEEECCCCCEEEEEEcCCCccccCCEEECCEEEEEeCCceEEE
Confidence 3 367899999999999998887533 33 3345566788888776 6664
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.00052 Score=55.75 Aligned_cols=121 Identities=13% Similarity=0.189 Sum_probs=75.0
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC-Cc--eeeeeccC-----ccceeee-------eEEEecCCc-
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-HA--KTMIPAHD-----SPLAALA-------SLSVGTKSG- 74 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-~~--~~~l~~H~-----~~V~~l~-------~lasgs~dg- 74 (161)
..|+.=+.+++++.|+..+.++- |=.|.||++.-- ++ +..++-|. ..|++-- .|+-.|.+|
T Consensus 161 NaHtyhiNSIS~NsD~Et~lSAD---dLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~~cn~f~YSSSKGt 237 (433)
T KOG1354|consen 161 NAHTYHINSISVNSDKETFLSAD---DLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPHHCNVFVYSSSKGT 237 (433)
T ss_pred ccceeEeeeeeecCccceEeecc---ceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHhHccEEEEecCCCc
Confidence 34566688999999998888743 778999998732 22 22222221 1122211 677788888
Q ss_pred eEEEEeCCcCce---eeEEeecCc----------ceEEEEEeecCCeEEEEecCCCCeEEEEec-CCCCeEEEEE
Q psy505 75 YRLFSLNSIDTL---EQIYENSQE----------DVCIVERLFSSSLVAVVSLSSPRKLTVCHF-KRGSEICNYS 135 (161)
Q Consensus 75 iriwd~~~~~~~---~~~~~~~~~----------~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~-~~~~~i~~l~ 135 (161)
|||=|++....+ .++++.... -.+|-.+-|+++|.++.+. +-.+|+|||+ ...+++..+.
T Consensus 238 IrLcDmR~~aLCd~hsKlfEepedp~~rsffseiIsSISDvKFs~sGryilsR-Dyltvk~wD~nme~~pv~t~~ 311 (433)
T KOG1354|consen 238 IRLCDMRQSALCDAHSKLFEEPEDPSSRSFFSEIISSISDVKFSHSGRYILSR-DYLTVKLWDLNMEAKPVETYP 311 (433)
T ss_pred EEEeechhhhhhcchhhhhccccCCcchhhHHHHhhhhhceEEccCCcEEEEe-ccceeEEEeccccCCcceEEe
Confidence 999999843211 122221110 1235578899999999985 4579999999 4455555543
|
|
| >KOG1334|consensus | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00016 Score=60.76 Aligned_cols=114 Identities=11% Similarity=0.141 Sum_probs=83.2
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcC--CC----------Ccee-eeeccCcc--ceeee-------eEEE
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDAD--NL----------HAKT-MIPAHDSP--LAALA-------SLSV 69 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~--~~----------~~~~-~l~~H~~~--V~~l~-------~las 69 (161)
.++.+|.+++++.++.-|.++-. |-.|.+++-. .| ..++ .++||.+. |.++- |+.|
T Consensus 334 d~~v~ITgl~Ysh~~sElLaSYn--De~IYLF~~~~~~G~~p~~~s~~~~~~k~vYKGHrN~~TVKgVNFfGPrsEyVvS 411 (559)
T KOG1334|consen 334 DDPVNITGLVYSHDGSELLASYN--DEDIYLFNKSMGDGSEPDPSSPREQYVKRVYKGHRNSRTVKGVNFFGPRSEYVVS 411 (559)
T ss_pred cCcccceeEEecCCccceeeeec--ccceEEeccccccCCCCCCCcchhhccchhhcccccccccceeeeccCccceEEe
Confidence 56788999999976655544333 7889998533 23 1222 37899874 44444 9999
Q ss_pred ecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCe
Q psy505 70 GTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE 130 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~ 130 (161)
||+=| |=||+-.+++.+ +++.+..+ .|.|+--+|-.-.|||.+-|..||||-..+.+.
T Consensus 412 GSDCGhIFiW~K~t~eii-~~MegDr~--VVNCLEpHP~~PvLAsSGid~DVKIWTP~~~er 470 (559)
T KOG1334|consen 412 GSDCGHIFIWDKKTGEII-RFMEGDRH--VVNCLEPHPHLPVLASSGIDHDVKIWTPLTAER 470 (559)
T ss_pred cCccceEEEEecchhHHH-HHhhcccc--eEeccCCCCCCchhhccCCccceeeecCCcccc
Confidence 99999 999999888755 56666543 467888889888899988899999999865543
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.00062 Score=61.14 Aligned_cols=107 Identities=15% Similarity=0.147 Sum_probs=75.5
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecC---------Cc-eEEEEeC
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTK---------SG-YRLFSLN 81 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~---------dg-iriwd~~ 81 (161)
|+..+.. ++..+.+ |. +.|+|-+=|+++.+.+++|.+|++.|++.. +|++++- |- +++||++
T Consensus 179 ~v~imR~--Nnr~lf~-G~-t~G~V~LrD~~s~~~iht~~aHs~siSDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLR 254 (1118)
T KOG1275|consen 179 GVTIMRY--NNRNLFC-GD-TRGTVFLRDPNSFETIHTFDAHSGSISDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLR 254 (1118)
T ss_pred ceEEEEe--cCcEEEe-ec-ccceEEeecCCcCceeeeeeccccceeeeeccCCeEEEeecccccccccccchhhhhhhh
Confidence 4656655 5566665 55 389999999999999999999999999888 6666653 56 8999986
Q ss_pred CcCce-------------------------------------------eeEEeecCcceEEEEEeecCCeEEEEecCCCC
Q psy505 82 SIDTL-------------------------------------------EQIYENSQEDVCIVERLFSSSLVAVVSLSSPR 118 (161)
Q Consensus 82 ~~~~~-------------------------------------------~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~ 118 (161)
.=+.+ ...+.-+-....+..|.+|+++.+++-+..++
T Consensus 255 mmral~PI~~~~~P~flrf~Psl~t~~~V~S~sGq~q~vd~~~lsNP~~~~~~v~p~~s~i~~fDiSsn~~alafgd~~g 334 (1118)
T KOG1275|consen 255 MMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQSGQFQFVDTATLSNPPAGVKMVNPNGSGISAFDISSNGDALAFGDHEG 334 (1118)
T ss_pred hhhccCCcccccCchhhhhcccccceEEEEecccceeeccccccCCCccceeEEccCCCcceeEEecCCCceEEEecccC
Confidence 21100 00000011122466788899999999888888
Q ss_pred eEEEEecC
Q psy505 119 KLTVCHFK 126 (161)
Q Consensus 119 ~i~iWD~~ 126 (161)
-|.+|-..
T Consensus 335 ~v~~wa~~ 342 (1118)
T KOG1275|consen 335 HVNLWADR 342 (1118)
T ss_pred cEeeecCC
Confidence 99999743
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=97.50 E-value=0.00084 Score=57.21 Aligned_cols=124 Identities=11% Similarity=0.122 Sum_probs=79.8
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecC---Cc-eEEEEeCCcCc
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTK---SG-YRLFSLNSIDT 85 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~---dg-iriwd~~~~~~ 85 (161)
.|.++.++|+|.-.+..-++---.+-|+|++ ++++..|. +++=+++- +++-++- .| +.+||+.+-++
T Consensus 272 PVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~--egpRN~~~fnp~g~ii~lAGFGNL~G~mEvwDv~n~K~ 348 (566)
T KOG2315|consen 272 PVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFP--EGPRNTAFFNPHGNIILLAGFGNLPGDMEVWDVPNRKL 348 (566)
T ss_pred CceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCC--CCCccceEECCCCCEEEEeecCCCCCceEEEeccchhh
Confidence 3778888998865544322225578999987 56666553 33334443 4444443 46 99999988554
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEec------CCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSL------SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~------~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
+..+ .... ..-+.|+|||..++++ .-||.++||+. +|+.+.+..|.+.-+.+.|-|-
T Consensus 349 i~~~---~a~~--tt~~eW~PdGe~flTATTaPRlrvdNg~Kiwhy-tG~~l~~~~f~sEL~qv~W~P~ 411 (566)
T KOG2315|consen 349 IAKF---KAAN--TTVFEWSPDGEYFLTATTAPRLRVDNGIKIWHY-TGSLLHEKMFKSELLQVEWRPF 411 (566)
T ss_pred cccc---ccCC--ceEEEEcCCCcEEEEEeccccEEecCCeEEEEe-cCceeehhhhhHhHhheeeeec
Confidence 4222 2212 2334689988776654 34889999997 5888887778777788888753
|
|
| >KOG1240|consensus | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.0012 Score=60.85 Aligned_cols=112 Identities=11% Similarity=0.093 Sum_probs=72.3
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee----------eEEEec-CCc-eEEEEeC
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA----------SLSVGT-KSG-YRLFSLN 81 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~----------~lasgs-~dg-iriwd~~ 81 (161)
.-|.+++.+|-+.+++.+.+ .|.+-+||++=+-++..+. .|..+++-+. .+++|+ ..+ +-+|+++
T Consensus 1196 G~vTSi~idp~~~WlviGts--~G~l~lWDLRF~~~i~sw~~P~~~~i~~v~~~~~~~~~S~~vs~~~~~~nevs~wn~~ 1273 (1431)
T KOG1240|consen 1196 GLVTSIVIDPWCNWLVIGTS--RGQLVLWDLRFRVPILSWEHPARAPIRHVWLCPTYPQESVSVSAGSSSNNEVSTWNME 1273 (1431)
T ss_pred cceeEEEecCCceEEEEecC--CceEEEEEeecCceeecccCcccCCcceEEeeccCCCCceEEEecccCCCceeeeecc
Confidence 35889999999999998776 7999999999777766654 2336666555 334444 455 9999999
Q ss_pred CcCceeeEEeecC-c------c---------eE-EEEEeecCCeEEEEecCCCCeEEEEecCCCC
Q psy505 82 SIDTLEQIYENSQ-E------D---------VC-IVERLFSSSLVAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 82 ~~~~~~~~~~~~~-~------~---------~~-v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~ 129 (161)
+|.+...++.+.. . + +. +.+..-.++++.+.++ .|..|+.||..+-.
T Consensus 1274 ~g~~~~vl~~s~~~p~ls~~~Ps~~~~kp~~~~~~~~~~~~~~~~~ltgg-sd~kIR~wD~~~p~ 1337 (1431)
T KOG1240|consen 1274 TGLRQTVLWASDGAPILSYALPSNDARKPDSLAGISCGVCEKNGFLLTGG-SDMKIRKWDPTRPE 1337 (1431)
T ss_pred cCcceEEEEcCCCCcchhhhcccccCCCCCcccceeeecccCCceeeecC-CccceeeccCCCcc
Confidence 9865443443310 0 0 00 1111123466655555 67789999987654
|
|
| >PRK04792 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0023 Score=54.19 Aligned_cols=124 Identities=14% Similarity=0.078 Sum_probs=67.2
Q ss_pred EEeecCCCceEEEEcCCCCcce--EEEEEcCCCCceeeeeccCccceeee------eEEEec-CCc---eEEEEeCCcCc
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGE--VQIFDADNLHAKTMIPAHDSPLAALA------SLSVGT-KSG---YRLFSLNSIDT 85 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~--v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs-~dg---iriwd~~~~~~ 85 (161)
.+.+++|||..|++.... +|. |.+||+.+++. ..+..|.......+ .++..+ .+| +.++|+.+++.
T Consensus 265 ~~~~wSPDG~~La~~~~~-~g~~~Iy~~dl~tg~~-~~lt~~~~~~~~p~wSpDG~~I~f~s~~~g~~~Iy~~dl~~g~~ 342 (448)
T PRK04792 265 GAPRFSPDGKKLALVLSK-DGQPEIYVVDIATKAL-TRITRHRAIDTEPSWHPDGKSLIFTSERGGKPQIYRVNLASGKV 342 (448)
T ss_pred CCeeECCCCCEEEEEEeC-CCCeEEEEEECCCCCe-EECccCCCCccceEECCCCCEEEEEECCCCCceEEEEECCCCCE
Confidence 356778999999876553 664 77889987764 44555544334333 444334 344 55567777653
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEec-CCCC--eEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSL-SSPR--KLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~-~~d~--~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
....+.+.. .....|+|++..++-. ..++ .|.++|+.+++. ..+.-........|+|+
T Consensus 343 ~~Lt~~g~~----~~~~~~SpDG~~l~~~~~~~g~~~I~~~dl~~g~~-~~lt~~~~d~~ps~spd 403 (448)
T PRK04792 343 SRLTFEGEQ----NLGGSITPDGRSMIMVNRTNGKFNIARQDLETGAM-QVLTSTRLDESPSVAPN 403 (448)
T ss_pred EEEecCCCC----CcCeeECCCCCEEEEEEecCCceEEEEEECCCCCe-EEccCCCCCCCceECCC
Confidence 221222221 2345788876444322 1222 466679888764 33321111223467776
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.023 Score=46.88 Aligned_cols=108 Identities=8% Similarity=-0.007 Sum_probs=71.6
Q ss_pred ceEEEEEcCCCCceeeeeccCccceeee-----eEEEec---------CCc-eEEEEeCCcCceeeEEeecCc----ceE
Q psy505 38 GEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGT---------KSG-YRLFSLNSIDTLEQIYENSQE----DVC 98 (161)
Q Consensus 38 g~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs---------~dg-iriwd~~~~~~~~~~~~~~~~----~~~ 98 (161)
|+|.+.|..+++.+.++..-..|---++ ++++.+ .+. |.+||+.+.+...++-.+..+ ...
T Consensus 27 ~~v~ViD~~~~~v~g~i~~G~~P~~~~spDg~~lyva~~~~~R~~~G~~~d~V~v~D~~t~~~~~~i~~p~~p~~~~~~~ 106 (352)
T TIGR02658 27 TQVYTIDGEAGRVLGMTDGGFLPNPVVASDGSFFAHASTVYSRIARGKRTDYVEVIDPQTHLPIADIELPEGPRFLVGTY 106 (352)
T ss_pred ceEEEEECCCCEEEEEEEccCCCceeECCCCCEEEEEeccccccccCCCCCEEEEEECccCcEEeEEccCCCchhhccCc
Confidence 7899999999998888874333322355 333334 344 999999998876555433220 112
Q ss_pred EEEEeecCCeEEE-Eec-CCCCeEEEEecCCCCeEEEEEecCceEEEEE
Q psy505 99 IVERLFSSSLVAV-VSL-SSPRKLTVCHFKRGSEICNYSFSNTILAVKL 145 (161)
Q Consensus 99 v~~~~fs~~~~~~-~s~-~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~ 145 (161)
-..++++|++..+ ++. +.++.|-|.|+++++.+.++.-++...-...
T Consensus 107 ~~~~~ls~dgk~l~V~n~~p~~~V~VvD~~~~kvv~ei~vp~~~~vy~t 155 (352)
T TIGR02658 107 PWMTSLTPDNKTLLFYQFSPSPAVGVVDLEGKAFVRMMDVPDCYHIFPT 155 (352)
T ss_pred cceEEECCCCCEEEEecCCCCCEEEEEECCCCcEEEEEeCCCCcEEEEe
Confidence 3467899988544 444 4488999999999999988865543333333
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00088 Score=59.09 Aligned_cols=108 Identities=14% Similarity=0.237 Sum_probs=78.4
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC---------------ceeeeeccCccceeee------eEEE
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH---------------AKTMIPAHDSPLAALA------SLSV 69 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~---------------~~~~l~~H~~~V~~l~------~las 69 (161)
-||....-++++|.+..++|++|. ||-+|+-.+.+.. .-++++||+..|.-+. .|.+
T Consensus 11 iPnnvkL~c~~WNke~gyIAcgG~--dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~sV~vvTWNe~~QKLTt 88 (1189)
T KOG2041|consen 11 IPNNVKLHCAEWNKESGYIACGGA--DGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNASVMVVTWNENNQKLTT 88 (1189)
T ss_pred CCCCceEEEEEEcccCCeEEeccc--cceeEEEEccccCCcccccccccccccchhhhhccCcceEEEEEeccccccccc
Confidence 466667889999998889999886 9999998776541 1246889999998888 7778
Q ss_pred ecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEE
Q psy505 70 GTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLT 121 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~ 121 (161)
+..+| |-+|=+..|.=+.+... ..+...|.+|+|+.+|.-++-.++|+.|.
T Consensus 89 SDt~GlIiVWmlykgsW~EEMiN-nRnKSvV~SmsWn~dG~kIcIvYeDGavI 140 (1189)
T KOG2041|consen 89 SDTSGLIIVWMLYKGSWCEEMIN-NRNKSVVVSMSWNLDGTKICIVYEDGAVI 140 (1189)
T ss_pred cCCCceEEEEeeecccHHHHHhh-CcCccEEEEEEEcCCCcEEEEEEccCCEE
Confidence 88899 99999988754433322 22345688999998776554444555443
|
|
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.00067 Score=59.91 Aligned_cols=136 Identities=12% Similarity=0.040 Sum_probs=84.2
Q ss_pred CCCCceeEEeecCCCce-EEEEcCCCCcceEEEEEcCCC-CceeeeeccCccceeee-------eEEEecCCc-eEEEEe
Q psy505 11 PPNPNGICCLCVNSDNC-YLAYPGSNSIGEVQIFDADNL-HAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~-~la~~g~~~dg~v~iWd~~~~-~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~ 80 (161)
|.+..++..+.++|+.. .+|+ .+. |-.|..||+++- .+++.+..-.+.-..|. .+|+ +... |++||+
T Consensus 111 hghsraitd~n~~~q~pdVlat-csv-dt~vh~wd~rSp~~p~ys~~~w~s~asqVkwnyk~p~vlas-shg~~i~vwd~ 187 (1081)
T KOG0309|consen 111 HGHSRAITDINFNPQHPDVLAT-CSV-DTYVHAWDMRSPHRPFYSTSSWRSAASQVKWNYKDPNVLAS-SHGNDIFVWDL 187 (1081)
T ss_pred ecCccceeccccCCCCCcceee-ccc-cccceeeeccCCCcceeeeecccccCceeeecccCcchhhh-ccCCceEEEec
Confidence 56777888999988654 5555 443 999999999975 45565544333344444 3443 3333 999999
Q ss_pred CCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEE--EecCceEEEEECCcEEE
Q psy505 81 NSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNY--SFSNTILAVKLNRKKEE 151 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l--~~~~~V~~v~~~~~~~v 151 (161)
+.|........+|. ..+..+.|.. -...+.+.+.|++|+.||-.+...-.+. .-..+|+--++-|-+-.
T Consensus 188 r~gs~pl~s~K~~v--s~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kSt~e~~~~vtt~~piw~~r~~Pfg~g 259 (1081)
T KOG0309|consen 188 RKGSTPLCSLKGHV--SSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKSTTESKRTVTTNFPIWRGRYLPFGEG 259 (1081)
T ss_pred cCCCcceEEecccc--eeeehHHHhhhhhhhhcccCCCCceeeecccccccccceeccccCcceeccccccCce
Confidence 98764434555654 3466677763 2223445567999999998765432222 22356666666664333
|
|
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.00034 Score=36.10 Aligned_cols=32 Identities=19% Similarity=0.402 Sum_probs=27.0
Q ss_pred CCceeeeeccCccceeee------eEEEecCCc-eEEEE
Q psy505 48 LHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 48 ~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd 79 (161)
+++...+.+|...|.++. ++++++.|+ +++||
T Consensus 2 ~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~d~~~~~~~ 40 (40)
T smart00320 2 GELLKTLKGHTGPVTSVAFSPDGKYLASASDDGTIKLWD 40 (40)
T ss_pred cEEEEEEEecCCceeEEEECCCCCEEEEecCCCeEEEcC
Confidence 456677888888998887 889999999 99996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0021 Score=55.22 Aligned_cols=68 Identities=16% Similarity=0.304 Sum_probs=50.3
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCc
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~ 83 (161)
+.+..+.+.+++|+...++.+.. ||+|.+||...+.. .+.-+.=..+.++ +|++|++.| +++||+.-.
T Consensus 257 pL~s~v~~ca~sp~E~kLvlGC~--DgSiiLyD~~~~~t--~~~ka~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 257 PLPSQVICCARSPSEDKLVLGCE--DGSIILYDTTRGVT--LLAKAEFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ecCCcceEEecCcccceEEEEec--CCeEEEEEcCCCee--eeeeecccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 44556788888999999998776 99999999886632 2222233344455 899999999 999998653
|
|
| >KOG4532|consensus | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.015 Score=46.18 Aligned_cols=138 Identities=10% Similarity=0.092 Sum_probs=83.8
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCC--CceeeeeccC---ccceeee----eEEEecCCc-eEEEEeCCcCc
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL--HAKTMIPAHD---SPLAALA----SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~--~~~~~l~~H~---~~V~~l~----~lasgs~dg-iriwd~~~~~~ 85 (161)
...++++++|+.++++-|. ...|-.|.+... ..+.+..+.+ +--.+.+ .+|++++|| +-|||++.-..
T Consensus 160 ~~ns~~~snd~~~~~~Vgd--s~~Vf~y~id~~sey~~~~~~a~t~D~gF~~S~s~~~~~FAv~~Qdg~~~I~DVR~~~t 237 (344)
T KOG4532|consen 160 TQNSLHYSNDPSWGSSVGD--SRRVFRYAIDDESEYIENIYEAPTSDHGFYNSFSENDLQFAVVFQDGTCAIYDVRNMAT 237 (344)
T ss_pred ceeeeEEcCCCceEEEecC--CCcceEEEeCCccceeeeeEecccCCCceeeeeccCcceEEEEecCCcEEEEEeccccc
Confidence 4677888999999999886 577888877643 2333222221 1222333 899999999 99999986432
Q ss_pred eee----EEeecCcceEEEEEe-ecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ec-------Cc-eEEEEECCc--E
Q psy505 86 LEQ----IYENSQEDVCIVERL-FSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FS-------NT-ILAVKLNRK--K 149 (161)
Q Consensus 86 ~~~----~~~~~~~~~~v~~~~-fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~-------~~-V~~v~~~~~--~ 149 (161)
... ..-.|.+++.++.+. +.+..+.+.|.. -..++|-|.++++..+.+. ++ ++ |.+..|+.+ .
T Consensus 238 pm~~~sstrp~hnGa~R~c~Fsl~g~lDLLf~sEh-fs~~hv~D~R~~~~~q~I~i~~d~~~~~~tq~ifgt~f~~~n~s 316 (344)
T KOG4532|consen 238 PMAEISSTRPHHNGAFRVCRFSLYGLLDLLFISEH-FSRVHVVDTRNYVNHQVIVIPDDVERKHNTQHIFGTNFNNENES 316 (344)
T ss_pred chhhhcccCCCCCCceEEEEecCCCcceEEEEecC-cceEEEEEcccCceeeEEecCccccccccccccccccccCCCcc
Confidence 211 111355555544433 234556677653 2469999999988665543 22 22 777777664 4
Q ss_pred EEEEecc
Q psy505 150 EEEEDEE 156 (161)
Q Consensus 150 ~vv~~~~ 156 (161)
+-|..+.
T Consensus 317 ~~v~~e~ 323 (344)
T KOG4532|consen 317 NDVKNEL 323 (344)
T ss_pred cccccch
Confidence 4444443
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.044 Score=41.39 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=66.8
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCcccee---ee--eEEEecCCc-eEEEEeCCcCceeeEEeecCcc--
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAA---LA--SLSVGTKSG-YRLFSLNSIDTLEQIYENSQED-- 96 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~---l~--~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~-- 96 (161)
++..++. .. ++.+..||..+|+.+..+.. .+++.. +. .+..++.++ +..+|.++|+.+-+......+.
T Consensus 36 ~~~v~~~-~~--~~~l~~~d~~tG~~~W~~~~-~~~~~~~~~~~~~~v~v~~~~~~l~~~d~~tG~~~W~~~~~~~~~~~ 111 (238)
T PF13360_consen 36 GGRVYVA-SG--DGNLYALDAKTGKVLWRFDL-PGPISGAPVVDGGRVYVGTSDGSLYALDAKTGKVLWSIYLTSSPPAG 111 (238)
T ss_dssp TTEEEEE-ET--TSEEEEEETTTSEEEEEEEC-SSCGGSGEEEETTEEEEEETTSEEEEEETTTSCEEEEEEE-SSCTCS
T ss_pred CCEEEEE-cC--CCEEEEEECCCCCEEEEeec-cccccceeeecccccccccceeeeEecccCCcceeeeeccccccccc
Confidence 4544444 33 79999999999998888775 333222 22 555666777 9999999998664422222111
Q ss_pred -eEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe
Q psy505 97 -VCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 97 -~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~ 136 (161)
.......+..+.+++.. .++.|..+|.++|+.+-.+..
T Consensus 112 ~~~~~~~~~~~~~~~~~~--~~g~l~~~d~~tG~~~w~~~~ 150 (238)
T PF13360_consen 112 VRSSSSPAVDGDRLYVGT--SSGKLVALDPKTGKLLWKYPV 150 (238)
T ss_dssp TB--SEEEEETTEEEEEE--TCSEEEEEETTTTEEEEEEES
T ss_pred cccccCceEecCEEEEEe--ccCcEEEEecCCCcEEEEeec
Confidence 11223344455554443 256899999999999877764
|
... |
| >KOG1064|consensus | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.00017 Score=68.47 Aligned_cols=64 Identities=20% Similarity=0.346 Sum_probs=53.5
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-eEEEecCCc-eEEEEeCCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-~lasgs~dg-iriwd~~~~ 83 (161)
|+.|+..+++.|.-+.++++|. +|.|.|||++.++..+++++ ..-. +|.+|+..| +|||++..-
T Consensus 2335 H~~gaT~l~~~P~~qllisggr--~G~v~l~D~rqrql~h~~~~-----~~~~~~f~~~ss~g~ikIw~~s~~ 2400 (2439)
T KOG1064|consen 2335 HDGGATVLAYAPKHQLLISGGR--KGEVCLFDIRQRQLRHTFQA-----LDTREYFVTGSSEGNIKIWRLSEF 2400 (2439)
T ss_pred cCCCceEEEEcCcceEEEecCC--cCcEEEeehHHHHHHHHhhh-----hhhhheeeccCcccceEEEEcccc
Confidence 5668888888999888888665 99999999999999999987 2211 899999999 999999653
|
|
| >TIGR03300 assembly_YfgL outer membrane assembly lipoprotein YfgL | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.037 Score=45.27 Aligned_cols=103 Identities=17% Similarity=0.161 Sum_probs=63.2
Q ss_pred eEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEE
Q psy505 27 CYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVE 101 (161)
Q Consensus 27 ~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~ 101 (161)
..+..++. +|.+.-+|..+|+.+..++-......+.. .+..++.+| +.-+|.++|+.+ ++..........
T Consensus 66 ~~v~v~~~--~g~v~a~d~~tG~~~W~~~~~~~~~~~p~v~~~~v~v~~~~g~l~ald~~tG~~~---W~~~~~~~~~~~ 140 (377)
T TIGR03300 66 GKVYAADA--DGTVVALDAETGKRLWRVDLDERLSGGVGADGGLVFVGTEKGEVIALDAEDGKEL---WRAKLSSEVLSP 140 (377)
T ss_pred CEEEEECC--CCeEEEEEccCCcEeeeecCCCCcccceEEcCCEEEEEcCCCEEEEEECCCCcEe---eeeccCceeecC
Confidence 34444444 79999999999998877654433222332 677788888 999999999754 222211101111
Q ss_pred EeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe
Q psy505 102 RLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 102 ~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~ 136 (161)
.... +...++.. .++.|..||.++|+.+-++..
T Consensus 141 p~v~-~~~v~v~~-~~g~l~a~d~~tG~~~W~~~~ 173 (377)
T TIGR03300 141 PLVA-NGLVVVRT-NDGRLTALDAATGERLWTYSR 173 (377)
T ss_pred CEEE-CCEEEEEC-CCCeEEEEEcCCCceeeEEcc
Confidence 1122 33334433 467899999999987755543
|
Members of this protein family are YfgL, a lipoprotein component of a complex that acts protein insertion into the bacterial outer membrane. Other members of this complex are NlpB, YfiO, and YaeT. This protein contains multiple copies of a repeat that, in other contexts, are associated with binding of the coenzyme PQQ. |
| >KOG4497|consensus | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0027 Score=51.53 Aligned_cols=119 Identities=8% Similarity=0.060 Sum_probs=76.4
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------e--------------------
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------S-------------------- 66 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~-------------------- 66 (161)
.+.|+.+.+.+|||..+...++. |-.|.+|.+.+.++.. ++--+..+..++ +
T Consensus 90 g~agls~~~WSPdgrhiL~tseF-~lriTVWSL~t~~~~~-~~~pK~~~kg~~f~~dg~f~ai~sRrDCkdyv~i~~c~~ 167 (447)
T KOG4497|consen 90 GQAGLSSISWSPDGRHILLTSEF-DLRITVWSLNTQKGYL-LPHPKTNVKGYAFHPDGQFCAILSRRDCKDYVQISSCKA 167 (447)
T ss_pred CCCcceeeeECCCcceEeeeecc-eeEEEEEEeccceeEE-ecccccCceeEEECCCCceeeeeecccHHHHHHHHhhHH
Confidence 35688899999999777777776 8999999999876532 221122222222 0
Q ss_pred -----------E-EE---ecCCc--eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC
Q psy505 67 -----------L-SV---GTKSG--YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 67 -----------l-as---gs~dg--iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~ 129 (161)
+ .+ -|.|| +-+||.- .-.+++..|. +..+-.+.|+|.+..++-|+.|+.+||-|--+-+
T Consensus 168 W~ll~~f~~dT~DltgieWsPdg~~laVwd~~---Leykv~aYe~-~lG~k~v~wsP~~qflavGsyD~~lrvlnh~tWk 243 (447)
T KOG4497|consen 168 WILLKEFKLDTIDLTGIEWSPDGNWLAVWDNV---LEYKVYAYER-GLGLKFVEWSPCNQFLAVGSYDQMLRVLNHFTWK 243 (447)
T ss_pred HHHHHhcCCCcccccCceECCCCcEEEEecch---hhheeeeeee-ccceeEEEeccccceEEeeccchhhhhhceeeee
Confidence 0 11 13456 7888852 1123333333 2457778899977777777889999998877777
Q ss_pred eEEEEEec
Q psy505 130 EICNYSFS 137 (161)
Q Consensus 130 ~i~~l~~~ 137 (161)
...++-|.
T Consensus 244 ~f~eflhl 251 (447)
T KOG4497|consen 244 PFGEFLHL 251 (447)
T ss_pred ehhhhccc
Confidence 77776543
|
|
| >KOG2315|consensus | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.026 Score=48.45 Aligned_cols=108 Identities=10% Similarity=0.130 Sum_probs=69.4
Q ss_pred eEEEEEcCCCCceeeeeccCccceeeeeEE--------EecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe-
Q psy505 39 EVQIFDADNLHAKTMIPAHDSPLAALASLS--------VGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL- 108 (161)
Q Consensus 39 ~v~iWd~~~~~~~~~l~~H~~~V~~l~~la--------sgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~- 108 (161)
++.+.+.++.++.-.+. -++||.++.+.. -|=+=- +-|||++ |+++..+-+|. -..+.|+|.+
T Consensus 252 ~Lyll~t~g~s~~V~L~-k~GPVhdv~W~~s~~EF~VvyGfMPAkvtifnlr-~~~v~df~egp-----RN~~~fnp~g~ 324 (566)
T KOG2315|consen 252 TLYLLATQGESVSVPLL-KEGPVHDVTWSPSGREFAVVYGFMPAKVTIFNLR-GKPVFDFPEGP-----RNTAFFNPHGN 324 (566)
T ss_pred eEEEEEecCceEEEecC-CCCCceEEEECCCCCEEEEEEecccceEEEEcCC-CCEeEeCCCCC-----ccceEECCCCC
Confidence 56777776445554554 378999998332 333334 8899984 35543333332 3467788854
Q ss_pred -EEEEe-cCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEe
Q psy505 109 -VAVVS-LSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 109 -~~~~s-~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~ 154 (161)
+++++ |--.+.+-|||+.+.++|..+.-.+..+ +.|+|| .+++++
T Consensus 325 ii~lAGFGNL~G~mEvwDv~n~K~i~~~~a~~tt~-~eW~PdGe~flTAT 373 (566)
T KOG2315|consen 325 IILLAGFGNLPGDMEVWDVPNRKLIAKFKAANTTV-FEWSPDGEYFLTAT 373 (566)
T ss_pred EEEEeecCCCCCceEEEeccchhhccccccCCceE-EEEcCCCcEEEEEe
Confidence 44444 2335679999999999998888766655 789998 444443
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.024 Score=48.08 Aligned_cols=130 Identities=15% Similarity=0.112 Sum_probs=69.6
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-eEEEecCCc-eEEEEeCCcCceeeEEeecC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-SLSVGTKSG-YRLFSLNSIDTLEQIYENSQ 94 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-~lasgs~dg-iriwd~~~~~~~~~~~~~~~ 94 (161)
...++.||+|..++..| ||.-.|+.....+....-+| .+.++.-. .+|+-...+ |+|+.--+.+.. +.+..
T Consensus 35 p~~ls~npngr~v~V~g---~geY~iyt~~~~r~k~~G~g-~~~vw~~~n~yAv~~~~~~I~I~kn~~~~~~-k~i~~-- 107 (443)
T PF04053_consen 35 PQSLSHNPNGRFVLVCG---DGEYEIYTALAWRNKAFGSG-LSFVWSSRNRYAVLESSSTIKIYKNFKNEVV-KSIKL-- 107 (443)
T ss_dssp -SEEEE-TTSSEEEEEE---TTEEEEEETTTTEEEEEEE--SEEEE-TSSEEEEE-TTS-EEEEETTEE-TT--------
T ss_pred CeeEEECCCCCEEEEEc---CCEEEEEEccCCcccccCce-eEEEEecCccEEEEECCCeEEEEEcCccccc-eEEcC--
Confidence 44788899999999865 78988888555444433333 23343333 555555555 888632121211 11111
Q ss_pred cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEecccee
Q psy505 95 EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEEDEEEEK 159 (161)
Q Consensus 95 ~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~~~~~~ 159 (161)
+..+..+ |.+..+.+.+ ++.|.+||.++++.+.++..+. |..|.||++ .++++.++.|+
T Consensus 108 -~~~~~~I-f~G~LL~~~~---~~~i~~yDw~~~~~i~~i~v~~-vk~V~Ws~~g~~val~t~~~i~ 168 (443)
T PF04053_consen 108 -PFSVEKI-FGGNLLGVKS---SDFICFYDWETGKLIRRIDVSA-VKYVIWSDDGELVALVTKDSIY 168 (443)
T ss_dssp -SS-EEEE-E-SSSEEEEE---TTEEEEE-TTT--EEEEESS-E--EEEEE-TTSSEEEEE-S-SEE
T ss_pred -CcccceE-EcCcEEEEEC---CCCEEEEEhhHcceeeEEecCC-CcEEEEECCCCEEEEEeCCeEE
Confidence 1123333 3355444332 3479999999999999998764 999999987 78888787764
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.01 Score=52.20 Aligned_cols=141 Identities=16% Similarity=0.166 Sum_probs=93.3
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee-eeeccCccc--eeee----eEEEecCCc-eEEEEeCCc
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT-MIPAHDSPL--AALA----SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~-~l~~H~~~V--~~l~----~lasgs~dg-iriwd~~~~ 83 (161)
++.....++.. .+.+++.+.+ -|.+.+++-.++.... ...+-.+.+ .+|+ ++|.|+..| |-++.+..+
T Consensus 33 ~~~v~lTc~ds--t~~~l~~GsS--~G~lyl~~R~~~~~~~~~~~~~~~~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~ 108 (726)
T KOG3621|consen 33 PARVKLTCVDA--TEEYLAMGSS--AGSVYLYNRHTGEMRKLKNEGATGITCVRSVSSVEYLVAAGTASGRVSVFQLNKE 108 (726)
T ss_pred cceEEEEEeec--CCceEEEecc--cceEEEEecCchhhhcccccCccceEEEEEecchhHhhhhhcCCceEEeehhhcc
Confidence 33344555544 6789998777 7999999988776432 232222222 2333 788899999 999998775
Q ss_pred CceeeEEe--ecC-cceEEEEEeecCCeEEEEecCCCCeEEEEecCCC-C---eEEE-EEecCceEEEEECCcEEEEEec
Q psy505 84 DTLEQIYE--NSQ-EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG-S---EICN-YSFSNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 84 ~~~~~~~~--~~~-~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~-~---~i~~-l~~~~~V~~v~~~~~~~vv~~~ 155 (161)
.+-...+- ++. ++..|.+++|++|+..+.+|.+.++|.+=-+... . ..+. +.+.+.|-.+......+.|..-
T Consensus 109 ~p~~~~~~t~~d~~~~~rVTal~Ws~~~~k~ysGD~~Gkv~~~~L~s~~~~~~~~q~il~~ds~IVQlD~~q~~LLVStl 188 (726)
T KOG3621|consen 109 LPRDLDYVTPCDKSHKCRVTALEWSKNGMKLYSGDSQGKVVLTELDSRQAFLSKSQEILSEDSEIVQLDYLQSYLLVSTL 188 (726)
T ss_pred CCCcceeeccccccCCceEEEEEecccccEEeecCCCceEEEEEechhhhhccccceeeccCcceEEeecccceehHhhh
Confidence 44322222 222 3567899999999999999988888877766551 1 1122 3467888888888877776654
Q ss_pred c
Q psy505 156 E 156 (161)
Q Consensus 156 ~ 156 (161)
.
T Consensus 189 ~ 189 (726)
T KOG3621|consen 189 T 189 (726)
T ss_pred h
Confidence 3
|
|
| >PF11768 DUF3312: Protein of unknown function (DUF3312); InterPro: IPR024511 This is a eukaryotic family of uncharacterised proteins that contain WD40 repeats | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.032 Score=48.09 Aligned_cols=119 Identities=18% Similarity=0.139 Sum_probs=71.9
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEE--cCCCCcceE----EEEEcCCCCc--e--eeeeccCccceeee-----
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAY--PGSNSIGEV----QIFDADNLHA--K--TMIPAHDSPLAALA----- 65 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~--~g~~~dg~v----~iWd~~~~~~--~--~~l~~H~~~V~~l~----- 65 (161)
|++|-.+ .|.-+|.-+ .|+.+.+...... +-+. +|.+ .+|++...+. + ..+ ...+.|.|++
T Consensus 196 lEvL~yi-rTE~dPl~~-~Fs~~~~~qi~tVE~s~s~-~g~~~~d~ciYE~~r~klqrvsvtsi-pL~s~v~~ca~sp~E 271 (545)
T PF11768_consen 196 LEVLSYI-RTENDPLDV-EFSLNQPYQIHTVEQSISV-KGEPSADSCIYECSRNKLQRVSVTSI-PLPSQVICCARSPSE 271 (545)
T ss_pred EEEEEEE-EecCCcEEE-EccCCCCcEEEEEEEecCC-CCCceeEEEEEEeecCceeEEEEEEE-ecCCcceEEecCccc
Confidence 4566667 566666422 4443222222211 1121 4443 3577664431 1 222 3566777777
Q ss_pred -eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC
Q psy505 66 -SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG 128 (161)
Q Consensus 66 -~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~ 128 (161)
.|+.|.+|| |.+||..++- ....+. ......++|+|++-.++.+++.+.+++||..-+
T Consensus 272 ~kLvlGC~DgSiiLyD~~~~~--t~~~ka---~~~P~~iaWHp~gai~~V~s~qGelQ~FD~ALs 331 (545)
T PF11768_consen 272 DKLVLGCEDGSIILYDTTRGV--TLLAKA---EFIPTLIAWHPDGAIFVVGSEQGELQCFDMALS 331 (545)
T ss_pred ceEEEEecCCeEEEEEcCCCe--eeeeee---cccceEEEEcCCCcEEEEEcCCceEEEEEeecC
Confidence 899999999 9999997652 222221 233456789999888888878889999998865
|
|
| >PF13360 PQQ_2: PQQ-like domain; PDB: 3HXJ_B 1YIQ_A 1KV9_A 3Q54_A 2YH3_A 3PRW_A 3P1L_A 3Q7M_A 3Q7O_A 3Q7N_A | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.04 Score=41.65 Aligned_cols=118 Identities=13% Similarity=0.070 Sum_probs=71.7
Q ss_pred cceEEEEEcCCCCceeeeec---cCccce-ee-e--eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe
Q psy505 37 IGEVQIFDADNLHAKTMIPA---HDSPLA-AL-A--SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL 108 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~---H~~~V~-~l-~--~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~ 108 (161)
+|+|..||+++|+.+....- ....+. .+ . .+.+++.++ +..||..+|+.+-+ +.... ..... .....+.
T Consensus 2 ~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~l~~~d~~tG~~~W~-~~~~~-~~~~~-~~~~~~~ 78 (238)
T PF13360_consen 2 DGTLSALDPRTGKELWSYDLGPGIGGPVATAVPDGGRVYVASGDGNLYALDAKTGKVLWR-FDLPG-PISGA-PVVDGGR 78 (238)
T ss_dssp TSEEEEEETTTTEEEEEEECSSSCSSEEETEEEETTEEEEEETTSEEEEEETTTSEEEEE-EECSS-CGGSG-EEEETTE
T ss_pred CCEEEEEECCCCCEEEEEECCCCCCCccceEEEeCCEEEEEcCCCEEEEEECCCCCEEEE-eeccc-cccce-eeecccc
Confidence 78999999999999888753 344442 22 2 566666777 99999999975422 22211 10011 2345566
Q ss_pred EEEEecCCCCeEEEEecCCCCeEEEE-Eec------CceEEEEECCcEEEEEe-cccee
Q psy505 109 VAVVSLSSPRKLTVCHFKRGSEICNY-SFS------NTILAVKLNRKKEEEED-EEEEK 159 (161)
Q Consensus 109 ~~~~s~~~d~~i~iWD~~~~~~i~~l-~~~------~~V~~v~~~~~~~vv~~-~~~~~ 159 (161)
+++++ .++.|..+|.++|+.+-+. ... .......+..+.+++.. ...++
T Consensus 79 v~v~~--~~~~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~ 135 (238)
T PF13360_consen 79 VYVGT--SDGSLYALDAKTGKVLWSIYLTSSPPAGVRSSSSPAVDGDRLYVGTSSGKLV 135 (238)
T ss_dssp EEEEE--TTSEEEEEETTTSCEEEEEEE-SSCTCSTB--SEEEEETTEEEEEETCSEEE
T ss_pred ccccc--ceeeeEecccCCcceeeeeccccccccccccccCceEecCEEEEEeccCcEE
Confidence 65555 4569999999999988763 322 12233445566666666 44443
|
... |
| >smart00320 WD40 WD40 repeats | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0021 Score=32.83 Aligned_cols=38 Identities=21% Similarity=0.466 Sum_probs=28.3
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEE
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFD 44 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd 44 (161)
+++.++ .. +...+.++.++|++..+++++. ||.+++||
T Consensus 3 ~~~~~~-~~--~~~~i~~~~~~~~~~~~~~~~~--d~~~~~~~ 40 (40)
T smart00320 3 ELLKTL-KG--HTGPVTSVAFSPDGKYLASASD--DGTIKLWD 40 (40)
T ss_pred EEEEEE-Ee--cCCceeEEEECCCCCEEEEecC--CCeEEEcC
Confidence 345666 33 3346889999988888888765 99999996
|
Note that these repeats are permuted with respect to the structural repeats (blades) of the beta propeller domain. |
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.059 Score=45.91 Aligned_cols=114 Identities=11% Similarity=0.077 Sum_probs=75.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcc-eEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIG-EVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg-~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
++.||.-..+..++.-++.+-. || .+-|+|..+++. ..+...-+.|.++. +++.+-+.. +-+.|+++|.
T Consensus 358 ~~~~VrY~r~~~~~e~~vigt~--dgD~l~iyd~~~~e~-kr~e~~lg~I~av~vs~dGK~~vvaNdr~el~vididngn 434 (668)
T COG4946 358 KKGGVRYRRIQVDPEGDVIGTN--DGDKLGIYDKDGGEV-KRIEKDLGNIEAVKVSPDGKKVVVANDRFELWVIDIDNGN 434 (668)
T ss_pred CCCceEEEEEccCCcceEEecc--CCceEEEEecCCceE-EEeeCCccceEEEEEcCCCcEEEEEcCceEEEEEEecCCC
Confidence 4455655555444444555333 88 799999998764 45555667788777 566665566 8888999986
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEec----CCCCeEEEEecCCCCeEE
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSL----SSPRKLTVCHFKRGSEIC 132 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~----~~d~~i~iWD~~~~~~i~ 132 (161)
.. ...... ---|..+.++||..++|-+ .=.+.|+|+|...++...
T Consensus 435 v~--~idkS~-~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~~Kiy~ 483 (668)
T COG4946 435 VR--LIDKSE-YGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDGGKIYD 483 (668)
T ss_pred ee--Eecccc-cceeEEEEEcCCceeEEEecCcceeeeeEEEEecCCCeEEE
Confidence 42 222211 1247899999999988865 223469999999887543
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.026 Score=50.77 Aligned_cols=134 Identities=14% Similarity=0.100 Sum_probs=82.7
Q ss_pred CCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCcc-ceeee------eEEEecCCc------eEEEEeCCcCce--e
Q psy505 23 NSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP-LAALA------SLSVGTKSG------YRLFSLNSIDTL--E 87 (161)
Q Consensus 23 ~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~-V~~l~------~lasgs~dg------iriwd~~~~~~~--~ 87 (161)
++++..+|.+.. ||.|-+.|- +.+.++.|+++... |..+- +|++-.+|+ +||||++..++- .
T Consensus 32 ~s~~~~vvigt~--~G~V~~Ln~-s~~~~~~fqa~~~siv~~L~~~~~~~~L~sv~Ed~~~np~llkiw~lek~~~n~sP 108 (933)
T KOG2114|consen 32 SSSTGSVVIGTA--DGRVVILNS-SFQLIRGFQAYEQSIVQFLYILNKQNFLFSVGEDEQGNPVLLKIWDLEKVDKNNSP 108 (933)
T ss_pred cCCCceEEEeec--cccEEEecc-cceeeehheecchhhhhHhhcccCceEEEEEeecCCCCceEEEEecccccCCCCCc
Confidence 456667777443 777666553 23555889999888 55444 555544442 899998643211 0
Q ss_pred eEE---e--ecC---cceEEEEEeecCCeEEEEecCCCCeEEEE--ecCCCCeE-EEEEe--cCceEEEEECCc---EEE
Q psy505 88 QIY---E--NSQ---EDVCIVERLFSSSLVAVVSLSSPRKLTVC--HFKRGSEI-CNYSF--SNTILAVKLNRK---KEE 151 (161)
Q Consensus 88 ~~~---~--~~~---~~~~v~~~~fs~~~~~~~s~~~d~~i~iW--D~~~~~~i-~~l~~--~~~V~~v~~~~~---~~v 151 (161)
.+. + ++. ++..+..++-+.+...+|.|..++.|..+ |+.+.+-. ..+.+ .++|+++.|..+ .+-
T Consensus 109 ~c~~~~ri~~~~np~~~~p~s~l~Vs~~l~~Iv~Gf~nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lF 188 (933)
T KOG2114|consen 109 QCLYEHRIFTIKNPTNPSPASSLAVSEDLKTIVCGFTNGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLF 188 (933)
T ss_pred ceeeeeeeeccCCCCCCCcceEEEEEccccEEEEEecCcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEE
Confidence 112 1 111 23445567777788888888888888877 44443332 23444 479999999776 356
Q ss_pred EEecccee
Q psy505 152 EEDEEEEK 159 (161)
Q Consensus 152 v~~~~~~~ 159 (161)
|++.++|+
T Consensus 189 v~Tt~~V~ 196 (933)
T KOG2114|consen 189 VATTEQVM 196 (933)
T ss_pred EEecceeE
Confidence 77777654
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=96.76 E-value=0.17 Score=38.92 Aligned_cols=139 Identities=13% Similarity=0.034 Sum_probs=82.8
Q ss_pred CCceeEEeecCCCceEEEEcCCCC----c--ceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNS----I--GEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLF 78 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~----d--g~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriw 78 (161)
...+...++++|+|...++..... . |.|..++.. ++....+ ..-..-+.++ ++.+-+..+ |..|
T Consensus 84 ~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~-~~~~~pNGi~~s~dg~~lyv~ds~~~~i~~~ 161 (246)
T PF08450_consen 84 PFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVA-DGLGFPNGIAFSPDGKTLYVADSFNGRIWRF 161 (246)
T ss_dssp CTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEE-EEESSEEEEEEETTSSEEEEEETTTTEEEEE
T ss_pred ccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEe-cCcccccceEECCcchheeecccccceeEEE
Confidence 445788899999998776633210 1 557777776 4433222 2233345665 445666666 8888
Q ss_pred EeCCcCc-ee--eEE-eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec-CceEEEEE---CCcEE
Q psy505 79 SLNSIDT-LE--QIY-ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS-NTILAVKL---NRKKE 150 (161)
Q Consensus 79 d~~~~~~-~~--~~~-~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~-~~V~~v~~---~~~~~ 150 (161)
+...... +. +.+ ......-.--.|++.+++...++....+.|.++|.. |+.+..+..+ ..+.+++| ..+.|
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~g~pDG~~vD~~G~l~va~~~~~~I~~~~p~-G~~~~~i~~p~~~~t~~~fgg~~~~~L 240 (246)
T PF08450_consen 162 DLDADGGELSNRRVFIDFPGGPGYPDGLAVDSDGNLWVADWGGGRIVVFDPD-GKLLREIELPVPRPTNCAFGGPDGKTL 240 (246)
T ss_dssp EEETTTCCEEEEEEEEE-SSSSCEEEEEEEBTTS-EEEEEETTTEEEEEETT-SCEEEEEE-SSSSEEEEEEESTTSSEE
T ss_pred eccccccceeeeeeEEEcCCCCcCCCcceEcCCCCEEEEEcCCCEEEEECCC-ccEEEEEcCCCCCEEEEEEECCCCCEE
Confidence 8854222 21 122 211111134578888877776765556789999988 9999999876 79999999 33466
Q ss_pred EEEe
Q psy505 151 EEED 154 (161)
Q Consensus 151 vv~~ 154 (161)
.|-.
T Consensus 241 ~vTt 244 (246)
T PF08450_consen 241 YVTT 244 (246)
T ss_dssp EEEE
T ss_pred EEEe
Confidence 6543
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG4190|consensus | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0051 Score=53.10 Aligned_cols=112 Identities=11% Similarity=0.035 Sum_probs=72.8
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeee-e----ccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMI-P----AHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l-~----~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
+..+.|-.|-.++++. ||.|.+||..-++++..+ . +..+.|.|+- .+|-++... +|++|.++++
T Consensus 787 i~~igfL~~lr~i~Sc----D~giHlWDPFigr~Laq~~dapk~~a~~~ikcl~nv~~~iliAgcsaeSTVKl~DaRsce 862 (1034)
T KOG4190|consen 787 IHDIGFLADLRSIASC----DGGIHLWDPFIGRLLAQMEDAPKEGAGGNIKCLENVDRHILIAGCSAESTVKLFDARSCE 862 (1034)
T ss_pred ccceeeeeccceeeec----cCcceeecccccchhHhhhcCcccCCCceeEecccCcchheeeeccchhhheeeeccccc
Confidence 3334343355566652 899999999888877643 2 2334555555 445446666 9999999886
Q ss_pred ceeeEEee--cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEE
Q psy505 85 TLEQIYEN--SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEIC 132 (161)
Q Consensus 85 ~~~~~~~~--~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~ 132 (161)
-..+..-- ..+...+.+++..+.|..++.+-+.++|.+-|.++|+.+.
T Consensus 863 ~~~E~kVcna~~Pna~~R~iaVa~~GN~lAa~LSnGci~~LDaR~G~vIN 912 (1034)
T KOG4190|consen 863 WTCELKVCNAPGPNALTRAIAVADKGNKLAAALSNGCIAILDARNGKVIN 912 (1034)
T ss_pred ceeeEEeccCCCCchheeEEEeccCcchhhHHhcCCcEEEEecCCCceec
Confidence 43332211 1122345667777777777777677899999999998765
|
|
| >TIGR02658 TTQ_MADH_Hv methylamine dehydrogenase heavy chain | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.26 Score=40.70 Aligned_cols=38 Identities=18% Similarity=0.177 Sum_probs=31.8
Q ss_pred CeEEEEecCCCCeEEEEEecCceEEEEECCc-E-EEEEec
Q psy505 118 RKLTVCHFKRGSEICNYSFSNTILAVKLNRK-K-EEEEDE 155 (161)
Q Consensus 118 ~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~-~-~vv~~~ 155 (161)
+.|.++|.++++.+..+.-...+++++|+|| + ++.++.
T Consensus 279 ~~V~ViD~~t~kvi~~i~vG~~~~~iavS~Dgkp~lyvtn 318 (352)
T TIGR02658 279 RFLFVVDAKTGKRLRKIELGHEIDSINVSQDAKPLLYALS 318 (352)
T ss_pred CEEEEEECCCCeEEEEEeCCCceeeEEECCCCCeEEEEeC
Confidence 5899999999999999888889999999998 4 444443
|
This family consists of the heavy chain of methylamine dehydrogenase light chain, a periplasmic enzyme. The enzyme contains a tryptophan tryptophylquinone (TTQ) prothetic group derived from two Trp residues in the light subunity. The enzyme forms a complex with the type I blue copper protein amicyanin and a cytochrome. Electron transfer procedes from TQQ to the copper and then to the heme group of the cytochrome. |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=96.71 E-value=0.23 Score=40.43 Aligned_cols=132 Identities=16% Similarity=0.114 Sum_probs=71.0
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcC--CCC--ceeeeecc----C--ccceeee-------eEEEecCCc
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDAD--NLH--AKTMIPAH----D--SPLAALA-------SLSVGTKSG 74 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~--~~~--~~~~l~~H----~--~~V~~l~-------~lasgs~dg 74 (161)
+.-.|-..++|+|||+++-..... +++|.++++. +++ .+..+..- . ..-..+. ++++.-...
T Consensus 189 ~~G~GPRh~~f~pdg~~~Yv~~e~-s~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~ispdg~~lyvsnr~~~ 267 (345)
T PF10282_consen 189 PPGSGPRHLAFSPDGKYAYVVNEL-SNTVSVFDYDPSDGSLTEIQTISTLPEGFTGENAPAEIAISPDGRFLYVSNRGSN 267 (345)
T ss_dssp STTSSEEEEEE-TTSSEEEEEETT-TTEEEEEEEETTTTEEEEEEEEESCETTSCSSSSEEEEEE-TTSSEEEEEECTTT
T ss_pred ccCCCCcEEEEcCCcCEEEEecCC-CCcEEEEeecccCCceeEEEEeeeccccccccCCceeEEEecCCCEEEEEeccCC
Confidence 344567889999999888666664 8999999988 442 22222211 1 1223333 333333333
Q ss_pred -eEEEEeC--CcCceeeEEeecCcceEEEEEeecCCeEEEE-ecCCCCeEEEEec--CCCCeEEEEE-e-cCceEEEEE
Q psy505 75 -YRLFSLN--SIDTLEQIYENSQEDVCIVERLFSSSLVAVV-SLSSPRKLTVCHF--KRGSEICNYS-F-SNTILAVKL 145 (161)
Q Consensus 75 -iriwd~~--~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~-s~~~d~~i~iWD~--~~~~~i~~l~-~-~~~V~~v~~ 145 (161)
|-+|++. +|. +..+-.-......=..|+++|++..++ +...++.|.+|+. ++|+....-. . -....+|.|
T Consensus 268 sI~vf~~d~~~g~-l~~~~~~~~~G~~Pr~~~~s~~g~~l~Va~~~s~~v~vf~~d~~tG~l~~~~~~~~~~~p~ci~f 345 (345)
T PF10282_consen 268 SISVFDLDPATGT-LTLVQTVPTGGKFPRHFAFSPDGRYLYVANQDSNTVSVFDIDPDTGKLTPVGSSVPIPSPVCIVF 345 (345)
T ss_dssp EEEEEEECTTTTT-EEEEEEEEESSSSEEEEEE-TTSSEEEEEETTTTEEEEEEEETTTTEEEEEEEEEESSSEEEEEE
T ss_pred EEEEEEEecCCCc-eEEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCeEEEEEEeCCCCcEEEecccccCCCCEEEeC
Confidence 9999993 333 322211111111135778888765444 4456678999965 5676443322 2 244555655
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG1409|consensus | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0061 Score=49.63 Aligned_cols=82 Identities=9% Similarity=0.130 Sum_probs=60.4
Q ss_pred CCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCC
Q psy505 46 DNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPR 118 (161)
Q Consensus 46 ~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~ 118 (161)
+.-..+.++.+|.+++.+++ .|.+|+.|. +-+||+--.....-...||.+. +.++.+-+--..+.|+++|+
T Consensus 185 ~~~~~i~~~~~h~~~~~~l~Wd~~~~~LfSg~~d~~vi~wdigg~~g~~~el~gh~~k--V~~l~~~~~t~~l~S~~edg 262 (404)
T KOG1409|consen 185 NGCQLITTFNGHTGEVTCLKWDPGQRLLFSGASDHSVIMWDIGGRKGTAYELQGHNDK--VQALSYAQHTRQLISCGEDG 262 (404)
T ss_pred cCCceEEEEcCcccceEEEEEcCCCcEEEeccccCceEEEeccCCcceeeeeccchhh--hhhhhhhhhheeeeeccCCC
Confidence 34467888999999999999 888999999 9999974322222344566543 44555655556678888999
Q ss_pred eEEEEecCCCC
Q psy505 119 KLTVCHFKRGS 129 (161)
Q Consensus 119 ~i~iWD~~~~~ 129 (161)
.|.+||.+..+
T Consensus 263 ~i~~w~mn~~r 273 (404)
T KOG1409|consen 263 GIVVWNMNVKR 273 (404)
T ss_pred eEEEEecccee
Confidence 99999987543
|
|
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=96.63 E-value=0.007 Score=48.92 Aligned_cols=119 Identities=15% Similarity=0.185 Sum_probs=72.1
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC---ceeeeeccCc-----cceeee-------eEEEecCCc-e
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH---AKTMIPAHDS-----PLAALA-------SLSVGTKSG-Y 75 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~---~~~~l~~H~~-----~V~~l~-------~lasgs~dg-i 75 (161)
.||.-+.+++++.|...+.++. |=.|.+|++.--. .+..++-|.. .|++.. .|.-.|..| |
T Consensus 170 aH~yhiNSiS~NsD~et~lSaD---dLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~~cn~fmYSsSkG~I 246 (460)
T COG5170 170 AHPYHINSISFNSDKETLLSAD---DLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPEMCNVFMYSSSKGEI 246 (460)
T ss_pred cceeEeeeeeecCchheeeecc---ceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHhHcceEEEecCCCcE
Confidence 4566688999999988888643 6789999986321 2223333331 122221 455566677 9
Q ss_pred EEEEeCCcCce---eeEEe----ecC-----c-ceEEEEEeecCCeEEEEecCCCCeEEEEecCCC-CeEEEE
Q psy505 76 RLFSLNSIDTL---EQIYE----NSQ-----E-DVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG-SEICNY 134 (161)
Q Consensus 76 riwd~~~~~~~---~~~~~----~~~-----~-~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~-~~i~~l 134 (161)
+|-|++....+ .++++ +-. + ..++..+-|++++.+++|. +-.+|+|||++-. +++.++
T Consensus 247 kl~DlRq~alcdn~~klfe~~~D~v~~~ff~eivsSISD~kFs~ngryIlsR-dyltvkiwDvnm~k~pikTi 318 (460)
T COG5170 247 KLNDLRQSALCDNSKKLFELTIDGVDVDFFEEIVSSISDFKFSDNGRYILSR-DYLTVKIWDVNMAKNPIKTI 318 (460)
T ss_pred EehhhhhhhhccCchhhhhhccCcccchhHHHHhhhhcceEEcCCCcEEEEe-ccceEEEEecccccCCceee
Confidence 99999732111 01111 110 0 1235678899999999986 5579999998754 344443
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=96.53 E-value=0.23 Score=41.85 Aligned_cols=129 Identities=12% Similarity=0.044 Sum_probs=70.4
Q ss_pred EeecCCCceE-EEEcCCC-CcceEEEEEcCCCCceeeeeccCccce--eee-----eEEEecCCc---eEEEEeCCcCce
Q psy505 19 CLCVNSDNCY-LAYPGSN-SIGEVQIFDADNLHAKTMIPAHDSPLA--ALA-----SLSVGTKSG---YRLFSLNSIDTL 86 (161)
Q Consensus 19 ~~~~~~d~~~-la~~g~~-~dg~v~iWd~~~~~~~~~l~~H~~~V~--~l~-----~lasgs~dg---iriwd~~~~~~~ 86 (161)
.-.++|||.. +++.+.. .+..|.++|+.+++...... ..+... ..+ ++.+.+.+| |-++|+.+++ .
T Consensus 192 ~p~wSpDG~~~i~y~s~~~~~~~Iyv~dl~tg~~~~lt~-~~g~~~~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~-~ 269 (419)
T PRK04043 192 FPKWANKEQTAFYYTSYGERKPTLYKYNLYTGKKEKIAS-SQGMLVVSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKT-L 269 (419)
T ss_pred eEEECCCCCcEEEEEEccCCCCEEEEEECCCCcEEEEec-CCCcEEeeEECCCCCEEEEEEccCCCcEEEEEECCCCc-E
Confidence 5566889975 6654331 13579999999887544332 222222 222 333344443 7777887765 3
Q ss_pred eeEEeecCcceEEEEEeecCCe--EEEEecCCC-CeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEe
Q psy505 87 EQIYENSQEDVCIVERLFSSSL--VAVVSLSSP-RKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~--~~~~s~~~d-~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~ 154 (161)
..+..+ .. ......|+||+ +++++...+ ..|.+.|+.+++. ..+.+.+. ....|+|| .++.+.
T Consensus 270 ~~LT~~-~~--~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~-~rlt~~g~-~~~~~SPDG~~Ia~~~ 337 (419)
T PRK04043 270 TQITNY-PG--IDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSV-EQVVFHGK-NNSSVSTYKNYIVYSS 337 (419)
T ss_pred EEcccC-CC--ccCccEECCCCCEEEEEECCCCCceEEEEECCCCCe-EeCccCCC-cCceECCCCCEEEEEE
Confidence 333222 11 12345699877 555553222 2688889988775 34443222 23488887 444443
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.23 Score=40.62 Aligned_cols=128 Identities=14% Similarity=0.200 Sum_probs=77.5
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCC-CCce--eeeeccCcc----------ceeee------eEEEecC--CceE
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADN-LHAK--TMIPAHDSP----------LAALA------SLSVGTK--SGYR 76 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~~~~--~~l~~H~~~----------V~~l~------~lasgs~--dgir 76 (161)
|.++.+++|.++.++.-. -|.|.+.-++. |... ..+..|.+. +.+.. +|.+..- |.|.
T Consensus 92 ~yvsvd~~g~~vf~AnY~-~g~v~v~p~~~dG~l~~~v~~~~h~g~~p~~rQ~~~h~H~a~~tP~~~~l~v~DLG~Dri~ 170 (346)
T COG2706 92 CYVSVDEDGRFVFVANYH-SGSVSVYPLQADGSLQPVVQVVKHTGSGPHERQESPHVHSANFTPDGRYLVVPDLGTDRIF 170 (346)
T ss_pred eEEEECCCCCEEEEEEcc-CceEEEEEcccCCccccceeeeecCCCCCCccccCCccceeeeCCCCCEEEEeecCCceEE
Confidence 777888899888887764 79999999866 5432 223345554 33333 6666654 4499
Q ss_pred EEEeCCcCceeeEEeec-CcceEEEEEeecCCeE--EEEecCCCCeEEEEecCC--CC--eEEEEE-----e--cCceEE
Q psy505 77 LFSLNSIDTLEQIYENS-QEDVCIVERLFSSSLV--AVVSLSSPRKLTVCHFKR--GS--EICNYS-----F--SNTILA 142 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~-~~~~~v~~~~fs~~~~--~~~s~~~d~~i~iWD~~~--~~--~i~~l~-----~--~~~V~~ 142 (161)
+|++..|... ..-... ..+..=.-+.|+||+. +++.. -+++|.+|.... |+ +++.+. | ....-+
T Consensus 171 ~y~~~dg~L~-~~~~~~v~~G~GPRHi~FHpn~k~aY~v~E-L~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aa 248 (346)
T COG2706 171 LYDLDDGKLT-PADPAEVKPGAGPRHIVFHPNGKYAYLVNE-LNSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAA 248 (346)
T ss_pred EEEcccCccc-cccccccCCCCCcceEEEcCCCcEEEEEec-cCCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeE
Confidence 9999876522 111111 0111224577998775 34443 467999998776 32 223221 3 246777
Q ss_pred EEECCc
Q psy505 143 VKLNRK 148 (161)
Q Consensus 143 v~~~~~ 148 (161)
|+++||
T Consensus 249 Ihis~d 254 (346)
T COG2706 249 IHISPD 254 (346)
T ss_pred EEECCC
Confidence 889998
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=96.49 E-value=0.011 Score=54.24 Aligned_cols=88 Identities=11% Similarity=0.155 Sum_probs=62.7
Q ss_pred eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-cCce---
Q psy505 66 SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-SNTI--- 140 (161)
Q Consensus 66 ~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~~V--- 140 (161)
.++.|++.| +-.+|... . +..+.++....-.|.+++|+.++..++.|..++-|.+||..+++.++.+.. ..++
T Consensus 101 ~ivi~Ts~ghvl~~d~~~-n-L~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~~i~e~~ap~t~v 178 (1206)
T KOG2079|consen 101 PIVIGTSHGHVLLSDMTG-N-LGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILKVITEHGAPVTGV 178 (1206)
T ss_pred eEEEEcCchhhhhhhhhc-c-cchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCcceeeeeecCCccceE
Confidence 789999999 99999853 2 323444443334578899999999999888889999999999999988863 3333
Q ss_pred -EEEEECCcEEEEEec
Q psy505 141 -LAVKLNRKKEEEEDE 155 (161)
Q Consensus 141 -~~v~~~~~~~vv~~~ 155 (161)
.-.++++...+...+
T Consensus 179 i~v~~t~~nS~llt~D 194 (1206)
T KOG2079|consen 179 IFVGRTSQNSKLLTSD 194 (1206)
T ss_pred EEEEEeCCCcEEEEcc
Confidence 333445555444443
|
|
| >KOG1354|consensus | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.049 Score=44.59 Aligned_cols=131 Identities=12% Similarity=0.147 Sum_probs=81.2
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-----ceeeeeccCccc------------eeee---------eEE
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-----AKTMIPAHDSPL------------AALA---------SLS 68 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-----~~~~l~~H~~~V------------~~l~---------~la 68 (161)
+-+.++-|+.+|.+||++.. +|.|.++.-.... ...+++.|+-+- +.+. +|.
T Consensus 26 diis~vef~~~Ge~LatGdk--gGRVv~f~r~~~~~~ey~~~t~fqshepEFDYLkSleieEKinkIrw~~~~n~a~FLl 103 (433)
T KOG1354|consen 26 DIISAVEFDHYGERLATGDK--GGRVVLFEREKLYKGEYNFQTEFQSHEPEFDYLKSLEIEEKINKIRWLDDGNLAEFLL 103 (433)
T ss_pred cceeeEEeecccceEeecCC--CCeEEEeecccccccceeeeeeeeccCcccchhhhhhhhhhhhhceecCCCCccEEEE
Confidence 34678888999999998554 8999998644322 334567776433 2222 566
Q ss_pred EecCCceEEEEeCCcCcee-------------------eEEe--------------ecCcceEEEEEeecCCeEEEEecC
Q psy505 69 VGTKSGYRLFSLNSIDTLE-------------------QIYE--------------NSQEDVCIVERLFSSSLVAVVSLS 115 (161)
Q Consensus 69 sgs~dgiriwd~~~~~~~~-------------------~~~~--------------~~~~~~~v~~~~fs~~~~~~~s~~ 115 (161)
++.++.||+|-++....-. .... .+.++..+.++.+++|...+.|+
T Consensus 104 stNdktiKlWKi~er~~k~~~~~~~~~~~~~~~~~lr~p~~~~~~~~vea~prRv~aNaHtyhiNSIS~NsD~Et~lSA- 182 (433)
T KOG1354|consen 104 STNDKTIKLWKIRERGSKKEGYNLPEEGPPGTITSLRLPVEGRHDLEVEASPRRVYANAHTYHINSISVNSDKETFLSA- 182 (433)
T ss_pred ecCCcceeeeeeeccccccccccccccCCCCccceeeceeeccccceeeeeeeeeccccceeEeeeeeecCccceEeec-
Confidence 6655559999876432100 0000 12345567788899999888887
Q ss_pred CCCeEEEEecCCCCe---EEEEEec------CceEEEEECCc
Q psy505 116 SPRKLTVCHFKRGSE---ICNYSFS------NTILAVKLNRK 148 (161)
Q Consensus 116 ~d~~i~iWD~~~~~~---i~~l~~~------~~V~~v~~~~~ 148 (161)
+|=.|-+|+++--.. |-.++.. .-|.+..|+|.
T Consensus 183 DdLRINLWnlei~d~sFnIVDIKP~nmEeLteVITsaEFhp~ 224 (433)
T KOG1354|consen 183 DDLRINLWNLEIIDQSFNIVDIKPANMEELTEVITSAEFHPH 224 (433)
T ss_pred cceeeeeccccccCCceeEEEccccCHHHHHHHHhhhccCHh
Confidence 566799999875331 1122221 24777888775
|
|
| >KOG1912|consensus | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.042 Score=49.19 Aligned_cols=57 Identities=12% Similarity=0.169 Sum_probs=45.5
Q ss_pred EEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----------eEEEecCCceEEEEeCCcCce
Q psy505 28 YLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----------SLSVGTKSGYRLFSLNSIDTL 86 (161)
Q Consensus 28 ~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----------~lasgs~dgiriwd~~~~~~~ 86 (161)
.||+ +.. .|.|-|||...+..+..|+-|.+++-+++ ++|--+...+-+|++.+|+.+
T Consensus 81 liAs-aD~-~GrIil~d~~~~s~~~~l~~~~~~~qdl~W~~~rd~Srd~LlaIh~ss~lvLwntdtG~k~ 148 (1062)
T KOG1912|consen 81 LIAS-ADI-SGRIILVDFVLASVINWLSHSNDSVQDLCWVPARDDSRDVLLAIHGSSTLVLWNTDTGEKF 148 (1062)
T ss_pred eEEe-ccc-cCcEEEEEehhhhhhhhhcCCCcchhheeeeeccCcchheeEEecCCcEEEEEEccCCcee
Confidence 4454 554 79999999999999999999999999888 444444444999999999854
|
|
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.061 Score=48.12 Aligned_cols=106 Identities=17% Similarity=0.091 Sum_probs=72.0
Q ss_pred CCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----------eEEEecCCceEEEEeCC-cCceeeEEe
Q psy505 24 SDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----------SLSVGTKSGYRLFSLNS-IDTLEQIYE 91 (161)
Q Consensus 24 ~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----------~lasgs~dgiriwd~~~-~~~~~~~~~ 91 (161)
.+|.++|+++. ||.|.|--+-+.+..+++.=+ -|+.+++ .+.+|+..|+-++.-.= |..- .. .
T Consensus 81 ~~Gey~asCS~--DGkv~I~sl~~~~~~~~~df~-rpiksial~Pd~~~~~sk~fv~GG~aglvL~er~wlgnk~-~v-~ 155 (846)
T KOG2066|consen 81 LEGEYVASCSD--DGKVVIGSLFTDDEITQYDFK-RPIKSIALHPDFSRQQSKQFVSGGMAGLVLSERNWLGNKD-SV-V 155 (846)
T ss_pred cCCceEEEecC--CCcEEEeeccCCccceeEecC-CcceeEEeccchhhhhhhheeecCcceEEEehhhhhcCcc-ce-e
Confidence 36899998776 999999888877665555432 4566666 78889999855554210 1110 11 1
Q ss_pred ecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec
Q psy505 92 NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS 137 (161)
Q Consensus 92 ~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~ 137 (161)
+|+..-.|.++.|..+.++-++ |-.|+|||..+++.+..+.++
T Consensus 156 l~~~eG~I~~i~W~g~lIAWan---d~Gv~vyd~~~~~~l~~i~~p 198 (846)
T KOG2066|consen 156 LSEGEGPIHSIKWRGNLIAWAN---DDGVKVYDTPTRQRLTNIPPP 198 (846)
T ss_pred eecCccceEEEEecCcEEEEec---CCCcEEEeccccceeeccCCC
Confidence 2322224778889999998886 335999999999988887764
|
|
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.0078 Score=46.43 Aligned_cols=97 Identities=16% Similarity=0.063 Sum_probs=50.1
Q ss_pred EEEEcCCCCcceEEEEEcCCCCceee-eeccCccceee-e------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceE
Q psy505 28 YLAYPGSNSIGEVQIFDADNLHAKTM-IPAHDSPLAAL-A------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVC 98 (161)
Q Consensus 28 ~la~~g~~~dg~v~iWd~~~~~~~~~-l~~H~~~V~~l-~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~ 98 (161)
.++++++ +|.|.+|+.......-. ...-..+|-+. . +..++..|| ||.|++.-.+.+ ....+|.. -.
T Consensus 72 ~~~vG~~--dg~v~~~n~n~~g~~~d~~~s~~e~i~~~Ip~~~~~~~~c~~~~dg~ir~~n~~p~k~~-g~~g~h~~-~~ 147 (238)
T KOG2444|consen 72 KLMVGTS--DGAVYVFNWNLEGAHSDRVCSGEESIDLGIPNGRDSSLGCVGAQDGRIRACNIKPNKVL-GYVGQHNF-ES 147 (238)
T ss_pred eEEeecc--cceEEEecCCccchHHHhhhcccccceeccccccccceeEEeccCCceeeeccccCcee-eeeccccC-CC
Confidence 4555455 99999999873211100 01111112111 1 666888899 999999765543 33334431 11
Q ss_pred EEEEeecCCeEEEEec--CCCCeEEEEecCCC
Q psy505 99 IVERLFSSSLVAVVSL--SSPRKLTVCHFKRG 128 (161)
Q Consensus 99 v~~~~fs~~~~~~~s~--~~d~~i~iWD~~~~ 128 (161)
...+.-+..+..++.. |.|+.++.||++.-
T Consensus 148 ~e~~ivv~sd~~i~~a~~S~d~~~k~W~ve~~ 179 (238)
T KOG2444|consen 148 GEELIVVGSDEFLKIADTSHDRVLKKWNVEKI 179 (238)
T ss_pred cceeEEecCCceEEeeccccchhhhhcchhhh
Confidence 2233333333333333 56777888887643
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.077 Score=48.04 Aligned_cols=114 Identities=11% Similarity=0.092 Sum_probs=70.8
Q ss_pred ceEEecCCCCCCceeEEeecC-------CCceEEEEcCCCCcceEEEEEcCCCC-ceeeee----ccCccceeee-----
Q psy505 3 VLHTIRDTPPNPNGICCLCVN-------SDNCYLAYPGSNSIGEVQIFDADNLH-AKTMIP----AHDSPLAALA----- 65 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~-------~d~~~la~~g~~~dg~v~iWd~~~~~-~~~~l~----~H~~~V~~l~----- 65 (161)
.+..| ..+.+. .+..++++ +...++.. + +..+.-||++-.. .+..-+ ......+|++
T Consensus 516 VV~eW-~~~~~~-~v~~~~p~~K~aqlt~e~tflGl--s--~n~lfriDpR~~~~k~v~~~~k~Y~~~~~Fs~~aTt~~G 589 (794)
T PF08553_consen 516 VVEEW-KVHDDI-PVVDIAPDSKFAQLTNEQTFLGL--S--DNSLFRIDPRLSGNKLVDSQSKQYSSKNNFSCFATTEDG 589 (794)
T ss_pred EEEEe-ecCCCc-ceeEecccccccccCCCceEEEE--C--CCceEEeccCCCCCceeeccccccccCCCceEEEecCCc
Confidence 34445 444432 27777773 34445444 2 6789999988632 222111 3445667777
Q ss_pred eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecC
Q psy505 66 SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK 126 (161)
Q Consensus 66 ~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~ 126 (161)
+||.||.+| ||+||- .|..-+..+-+-.. .|+.+.-+.||.++++. .+.-|.|.|..
T Consensus 590 ~iavgs~~G~IRLyd~-~g~~AKT~lp~lG~--pI~~iDvt~DGkwilaT-c~tyLlLi~t~ 647 (794)
T PF08553_consen 590 YIAVGSNKGDIRLYDR-LGKRAKTALPGLGD--PIIGIDVTADGKWILAT-CKTYLLLIDTL 647 (794)
T ss_pred eEEEEeCCCcEEeecc-cchhhhhcCCCCCC--CeeEEEecCCCcEEEEe-ecceEEEEEEe
Confidence 999999999 999993 44433233333332 47888888899887764 34568888864
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG2066|consensus | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.15 Score=45.76 Aligned_cols=121 Identities=14% Similarity=0.093 Sum_probs=76.3
Q ss_pred ceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeeeeEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEee
Q psy505 26 NCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALASLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLF 104 (161)
Q Consensus 26 ~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~f 104 (161)
+..+|.+.. +|.|.+.+.+ +.+ .+.--|...-..=.++||||+|| +.|-.+-+++.. ..+..+. .+-++++
T Consensus 49 ~~~~~~GtH--~g~v~~~~~~-~~~-~~~~~~s~~~~~Gey~asCS~DGkv~I~sl~~~~~~-~~~df~r---piksial 120 (846)
T KOG2066|consen 49 DKFFALGTH--RGAVYLTTCQ-GNP-KTNFDHSSSILEGEYVASCSDDGKVVIGSLFTDDEI-TQYDFKR---PIKSIAL 120 (846)
T ss_pred cceeeeccc--cceEEEEecC-Ccc-cccccccccccCCceEEEecCCCcEEEeeccCCccc-eeEecCC---cceeEEe
Confidence 467888555 8999999987 454 44444544311112999999999 999998887644 2333333 3567778
Q ss_pred cCCe-----EEEEecCCCCeEEEEec---CCCCeEEEEE-ecCceEEEEECCcEEEEEecc
Q psy505 105 SSSL-----VAVVSLSSPRKLTVCHF---KRGSEICNYS-FSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 105 s~~~-----~~~~s~~~d~~i~iWD~---~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~ 156 (161)
+|++ .-+++|+.-| +.++.- .....+ .+. ..++|.++.|+.+.++-+-+.
T Consensus 121 ~Pd~~~~~sk~fv~GG~ag-lvL~er~wlgnk~~v-~l~~~eG~I~~i~W~g~lIAWand~ 179 (846)
T KOG2066|consen 121 HPDFSRQQSKQFVSGGMAG-LVLSERNWLGNKDSV-VLSEGEGPIHSIKWRGNLIAWANDD 179 (846)
T ss_pred ccchhhhhhhheeecCcce-EEEehhhhhcCccce-eeecCccceEEEEecCcEEEEecCC
Confidence 8873 2355554434 666541 112222 222 358999999998888776554
|
|
| >KOG1275|consensus | Back alignment and domain information |
|---|
Probab=96.18 E-value=0.026 Score=51.14 Aligned_cols=126 Identities=12% Similarity=0.135 Sum_probs=86.5
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEE
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCI 99 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v 99 (161)
++..++-+|. -..+-..|+++.+......-..+.|.=+. ++.+|...| |-+-|.++.+.. ..+..|++ .+
T Consensus 146 ~~~~~i~Gg~--Q~~li~~Dl~~~~e~r~~~v~a~~v~imR~Nnr~lf~G~t~G~V~LrD~~s~~~i-ht~~aHs~--si 220 (1118)
T KOG1275|consen 146 GPSTLIMGGL--QEKLIHIDLNTEKETRTTNVSASGVTIMRYNNRNLFCGDTRGTVFLRDPNSFETI-HTFDAHSG--SI 220 (1118)
T ss_pred CCcceeecch--hhheeeeecccceeeeeeeccCCceEEEEecCcEEEeecccceEEeecCCcCcee-eeeecccc--ce
Confidence 3445666565 34566679988776555544443455555 788899999 999999887755 55667765 36
Q ss_pred EEEeecCCeEEEEec-------CCCCeEEEEecCCCCeEEEEEecCceEEEEECCc---EEEEEec
Q psy505 100 VERLFSSSLVAVVSL-------SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK---KEEEEDE 155 (161)
Q Consensus 100 ~~~~fs~~~~~~~s~-------~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~---~~vv~~~ 155 (161)
..|.-+.|.+..++- ..|.-|+|||++.-+.+.-+.++-.-.-++|.|. +++|+..
T Consensus 221 SDfDv~GNlLitCG~S~R~~~l~~D~FvkVYDLRmmral~PI~~~~~P~flrf~Psl~t~~~V~S~ 286 (1118)
T KOG1275|consen 221 SDFDVQGNLLITCGYSMRRYNLAMDPFVKVYDLRMMRALSPIQFPYGPQFLRFHPSLTTRLAVTSQ 286 (1118)
T ss_pred eeeeccCCeEEEeecccccccccccchhhhhhhhhhhccCCcccccCchhhhhcccccceEEEEec
Confidence 666677777766542 2466799999999888877777544455788885 6666643
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.12 Score=41.11 Aligned_cols=36 Identities=31% Similarity=0.417 Sum_probs=28.5
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP 55 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~ 55 (161)
=+-++++||+..||++.+ .|+|+++|+.. ..+..+.
T Consensus 46 WRkl~WSpD~tlLa~a~S--~G~i~vfdl~g-~~lf~I~ 81 (282)
T PF15492_consen 46 WRKLAWSPDCTLLAYAES--TGTIRVFDLMG-SELFVIP 81 (282)
T ss_pred heEEEECCCCcEEEEEcC--CCeEEEEeccc-ceeEEcC
Confidence 457788999999999887 79999999985 4444443
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.018 Score=48.99 Aligned_cols=102 Identities=14% Similarity=0.115 Sum_probs=72.5
Q ss_pred EEEcCCCCceeeeeccCccceeee------eEEEecCCceEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEec-
Q psy505 42 IFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL- 114 (161)
Q Consensus 42 iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dgiriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~- 114 (161)
.|+-.+...-..+.+-.-++..++ +|++....||.+|+...+.++.+++ |. .+..+.|||++.+|++-
T Consensus 16 f~~~~s~~~~~~~~~~~~p~~~~~~SP~G~~l~~~~~~~V~~~~g~~~~~l~~~~--~~---~V~~~~fSP~~kYL~tw~ 90 (561)
T COG5354 16 FWNSQSEVIHTRFESENWPVAYVSESPLGTYLFSEHAAGVECWGGPSKAKLVRFR--HP---DVKYLDFSPNEKYLVTWS 90 (561)
T ss_pred eecCccccccccccccCcchhheeecCcchheehhhccceEEccccchhheeeee--cC---CceecccCcccceeeeec
Confidence 466555555555665666777666 8888888889999998877664443 43 36788899999998874
Q ss_pred --------------CCCCeEEEEecCCCCeEEEEEec-Cc--eE-EEEECCc
Q psy505 115 --------------SSPRKLTVCHFKRGSEICNYSFS-NT--IL-AVKLNRK 148 (161)
Q Consensus 115 --------------~~d~~i~iWD~~~~~~i~~l~~~-~~--V~-~v~~~~~ 148 (161)
..++.+.+||.++|..+..+... .+ .+ -++|+-+
T Consensus 91 ~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~ 142 (561)
T COG5354 91 REPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSID 142 (561)
T ss_pred cCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeec
Confidence 23346999999999998888753 33 44 4677665
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.026 Score=49.18 Aligned_cols=52 Identities=8% Similarity=0.082 Sum_probs=43.7
Q ss_pred EEEeecCCeEEEEecCCCCeEEEEecCCCCeEEE--EEecCceEEEEECCcEEE
Q psy505 100 VERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICN--YSFSNTILAVKLNRKKEE 151 (161)
Q Consensus 100 ~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~--l~~~~~V~~v~~~~~~~v 151 (161)
.+++|.|+|.+++-|..|++|+|-|++++..+.. ++....|..+-|.|..+.
T Consensus 66 ~sL~W~~DGkllaVg~kdG~I~L~Dve~~~~l~~~~~s~e~~is~~~w~~~~v~ 119 (665)
T KOG4640|consen 66 ASLCWRPDGKLLAVGFKDGTIRLHDVEKGGRLVSFLFSVETDISKGIWDRIEVR 119 (665)
T ss_pred eeeeecCCCCEEEEEecCCeEEEEEccCCCceeccccccccchheeecccceee
Confidence 4889999999999999999999999999998888 445678888888755433
|
|
| >KOG2079|consensus | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.044 Score=50.46 Aligned_cols=104 Identities=13% Similarity=0.129 Sum_probs=63.5
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc-eeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA-KTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~-~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
|+.+.+. .+..+|++.+ .|.|-..|+.+.-+ .+.=.--.++|++++ +++.|-.+| |.+||+.+++.++
T Consensus 91 ~v~s~a~--~~~~ivi~Ts--~ghvl~~d~~~nL~~~~~ne~v~~~Vtsvafn~dg~~l~~G~~~G~V~v~D~~~~k~l~ 166 (1206)
T KOG2079|consen 91 GVISSAI--VVVPIVIGTS--HGHVLLSDMTGNLGPLHQNERVQGPVTSVAFNQDGSLLLAGLGDGHVTVWDMHRAKILK 166 (1206)
T ss_pred ceeeeee--eeeeEEEEcC--chhhhhhhhhcccchhhcCCccCCcceeeEecCCCceeccccCCCcEEEEEccCCccee
Confidence 4444444 5556777665 68999999875322 111122357899999 888899999 9999999988775
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEec
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~ 125 (161)
.+..+..+...+.-+.+..+...+.+++..+ .+|..
T Consensus 167 ~i~e~~ap~t~vi~v~~t~~nS~llt~D~~G--sf~~l 202 (1206)
T KOG2079|consen 167 VITEHGAPVTGVIFVGRTSQNSKLLTSDTGG--SFWKL 202 (1206)
T ss_pred eeeecCCccceEEEEEEeCCCcEEEEccCCC--ceEEE
Confidence 5444333334555555544444444432222 36654
|
|
| >COG4946 Uncharacterized protein related to the periplasmic component of the Tol biopolymer transport system [Function unknown] | Back alignment and domain information |
|---|
Probab=95.97 E-value=0.2 Score=42.79 Aligned_cols=111 Identities=14% Similarity=0.157 Sum_probs=72.2
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-----eEEEEeCC
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-----YRLFSLNS 82 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-----iriwd~~~ 82 (161)
-..|.++..+|||+.++.+.. ..++-+.|+.+|+....=+...+-|.... ++|-+=.+| |||+|+..
T Consensus 401 lg~I~av~vs~dGK~~vvaNd--r~el~vididngnv~~idkS~~~lItdf~~~~nsr~iAYafP~gy~tq~Iklydm~~ 478 (668)
T COG4946 401 LGNIEAVKVSPDGKKVVVAND--RFELWVIDIDNGNVRLIDKSEYGLITDFDWHPNSRWIAYAFPEGYYTQSIKLYDMDG 478 (668)
T ss_pred ccceEEEEEcCCCcEEEEEcC--ceEEEEEEecCCCeeEecccccceeEEEEEcCCceeEEEecCcceeeeeEEEEecCC
Confidence 345889999999999988665 57899999999876544455666777666 888777665 99999988
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEE--EEecCCCCeEEEEecCCCCeEEEEEe
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVA--VVSLSSPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~--~~s~~~d~~i~iWD~~~~~~i~~l~~ 136 (161)
++- +.-.++...-.+-+|.|++.. ..|. +=-|....+.+-.+.|
T Consensus 479 ~Ki----y~vTT~ta~DfsPaFD~d~ryLYfLs~------RsLdPs~Drv~fnf~f 524 (668)
T COG4946 479 GKI----YDVTTPTAYDFSPAFDPDGRYLYFLSA------RSLDPSNDRVIFNFSF 524 (668)
T ss_pred CeE----EEecCCcccccCcccCCCCcEEEEEec------cccCCCCCeeEEEEEE
Confidence 652 322222222344567775544 4443 2235555555545544
|
|
| >PF08450 SGL: SMP-30/Gluconolaconase/LRE-like region; InterPro: IPR013658 This family describes a region that is found in proteins expressed by a variety of eukaryotic and prokaryotic species | Back alignment and domain information |
|---|
Probab=95.86 E-value=0.58 Score=35.87 Aligned_cols=128 Identities=9% Similarity=-0.074 Sum_probs=75.3
Q ss_pred eecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCceEEEEeCCcCceeeEEeec
Q psy505 20 LCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSGYRLFSLNSIDTLEQIYENS 93 (161)
Q Consensus 20 ~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dgiriwd~~~~~~~~~~~~~~ 93 (161)
.++++ ++.++.+--. .|.|.-||..+++.. .+.... +..... .|..+..+++.++|..+++ ...+....
T Consensus 5 p~~d~~~g~l~~~D~~--~~~i~~~~~~~~~~~-~~~~~~-~~G~~~~~~~g~l~v~~~~~~~~~d~~~g~-~~~~~~~~ 79 (246)
T PF08450_consen 5 PVWDPRDGRLYWVDIP--GGRIYRVDPDTGEVE-VIDLPG-PNGMAFDRPDGRLYVADSGGIAVVDPDTGK-VTVLADLP 79 (246)
T ss_dssp EEEETTTTEEEEEETT--TTEEEEEETTTTEEE-EEESSS-EEEEEEECTTSEEEEEETTCEEEEETTTTE-EEEEEEEE
T ss_pred eEEECCCCEEEEEEcC--CCEEEEEECCCCeEE-EEecCC-CceEEEEccCCEEEEEEcCceEEEecCCCc-EEEEeecc
Confidence 34555 6666666443 789999999887543 232222 222222 5566667777888998874 33344331
Q ss_pred --C-cceEEEEEeecCCeEEEEecCCC--------CeEEEEecCCCCeEEEEEecCceEEEEECCcE--EEEE
Q psy505 94 --Q-EDVCIVERLFSSSLVAVVSLSSP--------RKLTVCHFKRGSEICNYSFSNTILAVKLNRKK--EEEE 153 (161)
Q Consensus 94 --~-~~~~v~~~~fs~~~~~~~s~~~d--------~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~--~vv~ 153 (161)
. .......+++.|++...++.... +.|..++.. ++.......-....+++|+|++ +.++
T Consensus 80 ~~~~~~~~~ND~~vd~~G~ly~t~~~~~~~~~~~~g~v~~~~~~-~~~~~~~~~~~~pNGi~~s~dg~~lyv~ 151 (246)
T PF08450_consen 80 DGGVPFNRPNDVAVDPDGNLYVTDSGGGGASGIDPGSVYRIDPD-GKVTVVADGLGFPNGIAFSPDGKTLYVA 151 (246)
T ss_dssp TTCSCTEEEEEEEE-TTS-EEEEEECCBCTTCGGSEEEEEEETT-SEEEEEEEEESSEEEEEEETTSSEEEEE
T ss_pred CCCcccCCCceEEEcCCCCEEEEecCCCccccccccceEEECCC-CeEEEEecCcccccceEECCcchheeec
Confidence 1 34567789999988766653211 457777777 5533333334667899999983 4444
|
These proteins include various enzymes, such as senescence marker protein 30 (SMP-30, Q15493 from SWISSPROT), gluconolactonase (Q01578 from SWISSPROT) and luciferin-regenerating enzyme (LRE, Q86DU5 from SWISSPROT). SMP-30 is known to hydrolyse diisopropyl phosphorofluoridate in the liver, and has been noted as having sequence similarity, in the region described in this family, with PON1 (P52430 from SWISSPROT) and LRE. ; PDB: 2GHS_A 2DG0_L 2DG1_D 2DSO_D 3E5Z_A 2IAT_A 2IAV_A 2GVV_A 3HLI_A 2GVU_A .... |
| >KOG0309|consensus | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.041 Score=49.06 Aligned_cols=56 Identities=13% Similarity=0.220 Sum_probs=45.9
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCC-ceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCc
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLH-AKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~-~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~ 83 (161)
|+..+|++. ...|++||++-|. ++..+++|...|+++. .+.+++.|| ++.||-+..
T Consensus 170 ~p~vlassh---g~~i~vwd~r~gs~pl~s~K~~vs~vn~~~fnr~~~s~~~s~~~d~tvkfw~y~kS 234 (1081)
T KOG0309|consen 170 DPNVLASSH---GNDIFVWDLRKGSTPLCSLKGHVSSVNSIDFNRFKYSEIMSSSNDGTVKFWDYSKS 234 (1081)
T ss_pred Ccchhhhcc---CCceEEEeccCCCcceEEecccceeeehHHHhhhhhhhhcccCCCCceeeeccccc
Confidence 566777643 4679999999875 7899999999999888 778899999 999998654
|
|
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=95.76 E-value=0.066 Score=46.27 Aligned_cols=93 Identities=12% Similarity=0.109 Sum_probs=63.6
Q ss_pred eeEEeecCCCceEEEEcCCC--------Cc-ceEEEEEcCCCCceeeeec--cCccceeee-------eEEEecCCceEE
Q psy505 16 GICCLCVNSDNCYLAYPGSN--------SI-GEVQIFDADNLHAKTMIPA--HDSPLAALA-------SLSVGTKSGYRL 77 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~--------~d-g~v~iWd~~~~~~~~~l~~--H~~~V~~l~-------~lasgs~dgiri 77 (161)
+|.-+.|+|..+||++=+-- ++ ..+.|||+++|.....|.. ...+++-+- ++|.-..++|-|
T Consensus 251 ~Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI~tG~lkrsF~~~~~~~~~WP~frWS~DdKy~Arm~~~sisI 330 (698)
T KOG2314|consen 251 GVQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDIATGLLKRSFPVIKSPYLKWPIFRWSHDDKYFARMTGNSISI 330 (698)
T ss_pred CceeeecCCccceEEEecCCccccCcccCCCceEEEEEccccchhcceeccCCCccccceEEeccCCceeEEeccceEEE
Confidence 57778889999999874310 12 3699999999999888876 445566555 888888889999
Q ss_pred EEeCCcCceeeEEeecC-cceEEEEEeecCCeEEEE
Q psy505 78 FSLNSIDTLEQIYENSQ-EDVCIVERLFSSSLVAVV 112 (161)
Q Consensus 78 wd~~~~~~~~~~~~~~~-~~~~v~~~~fs~~~~~~~ 112 (161)
|+..+- .++.+.. ....|..+.|||-...+|
T Consensus 331 yEtpsf----~lld~Kslki~gIr~FswsP~~~llA 362 (698)
T KOG2314|consen 331 YETPSF----MLLDKKSLKISGIRDFSWSPTSNLLA 362 (698)
T ss_pred EecCce----eeecccccCCccccCcccCCCcceEE
Confidence 998552 2333322 122366777887544433
|
|
| >PRK04043 tolB translocation protein TolB; Provisional | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.45 Score=40.05 Aligned_cols=123 Identities=11% Similarity=0.023 Sum_probs=66.5
Q ss_pred EeecCCCceEEEEcCCC-CcceEEEEEcCCCCceeeeeccCc----cceeee--eEEEec-CCc---eEEEEeCCcCcee
Q psy505 19 CLCVNSDNCYLAYPGSN-SIGEVQIFDADNLHAKTMIPAHDS----PLAALA--SLSVGT-KSG---YRLFSLNSIDTLE 87 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~-~dg~v~iWd~~~~~~~~~l~~H~~----~V~~l~--~lasgs-~dg---iriwd~~~~~~~~ 87 (161)
+..++|||..++..... .+..|.++|+.+++. ..+..+.. +.++=. .|+-.| ..| |-++|+.+|+...
T Consensus 237 ~~~~SPDG~~la~~~~~~g~~~Iy~~dl~~g~~-~~LT~~~~~d~~p~~SPDG~~I~F~Sdr~g~~~Iy~~dl~~g~~~r 315 (419)
T PRK04043 237 VSDVSKDGSKLLLTMAPKGQPDIYLYDTNTKTL-TQITNYPGIDVNGNFVEDDKRIVFVSDRLGYPNIFMKKLNSGSVEQ 315 (419)
T ss_pred eeEECCCCCEEEEEEccCCCcEEEEEECCCCcE-EEcccCCCccCccEECCCCCEEEEEECCCCCceEEEEECCCCCeEe
Confidence 45678899877765432 135688889888764 34443332 211111 333233 333 7777887776432
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEe--cCC------C-CeEEEEecCCCCeEEEEEecCceEEEEECCcE
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVS--LSS------P-RKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s--~~~------d-~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~ 149 (161)
.++.+. . ...|||++..++- ... . ..|.+.|+.+++. ..+.....-....|+||+
T Consensus 316 lt~~g~----~--~~~~SPDG~~Ia~~~~~~~~~~~~~~~~I~v~d~~~g~~-~~LT~~~~~~~p~~SPDG 379 (419)
T PRK04043 316 VVFHGK----N--NSSVSTYKNYIVYSSRETNNEFGKNTFNLYLISTNSDYI-RRLTANGVNQFPRFSSDG 379 (419)
T ss_pred CccCCC----c--CceECCCCCEEEEEEcCCCcccCCCCcEEEEEECCCCCe-EECCCCCCcCCeEECCCC
Confidence 222221 1 1368887765543 211 1 3688889988864 445433233357889983
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.83 Score=35.48 Aligned_cols=128 Identities=12% Similarity=0.076 Sum_probs=72.1
Q ss_pred CCceEEEEcCCCCcceEEEEEcC-CCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEE-----
Q psy505 24 SDNCYLAYPGSNSIGEVQIFDAD-NLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIY----- 90 (161)
Q Consensus 24 ~d~~~la~~g~~~dg~v~iWd~~-~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~----- 90 (161)
..+..|+.+.. +| +.+++.. ..+...... ..+|..+. .|++=++ + +.++++.+-.......
T Consensus 5 ~~~~~L~vGt~--~G-l~~~~~~~~~~~~~i~~--~~~I~ql~vl~~~~~llvLsd-~~l~~~~L~~l~~~~~~~~~~~~ 78 (275)
T PF00780_consen 5 SWGDRLLVGTE--DG-LYVYDLSDPSKPTRILK--LSSITQLSVLPELNLLLVLSD-GQLYVYDLDSLEPVSTSAPLAFP 78 (275)
T ss_pred cCCCEEEEEEC--CC-EEEEEecCCccceeEee--cceEEEEEEecccCEEEEEcC-CccEEEEchhhcccccccccccc
Confidence 35566666543 67 8999983 333333332 33377777 3333333 6 9999986533221000
Q ss_pred ------eecCcceEEEEEe---ecCCeEEEEecCCCCeEEEEecCCC-----CeEEEEEecCceEEEEECCcEEEEEecc
Q psy505 91 ------ENSQEDVCIVERL---FSSSLVAVVSLSSPRKLTVCHFKRG-----SEICNYSFSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 91 ------~~~~~~~~v~~~~---fs~~~~~~~s~~~d~~i~iWD~~~~-----~~i~~l~~~~~V~~v~~~~~~~vv~~~~ 156 (161)
........+..++ -......++.+ ..++|+||..... +...++..++.+.++.|.++.+++...+
T Consensus 79 ~~~~~~~~~~~~~~v~~f~~~~~~~~~~~L~va-~kk~i~i~~~~~~~~~f~~~~ke~~lp~~~~~i~~~~~~i~v~~~~ 157 (275)
T PF00780_consen 79 KSRSLPTKLPETKGVSFFAVNGGHEGSRRLCVA-VKKKILIYEWNDPRNSFSKLLKEISLPDPPSSIAFLGNKICVGTSK 157 (275)
T ss_pred ccccccccccccCCeeEEeeccccccceEEEEE-ECCEEEEEEEECCcccccceeEEEEcCCCcEEEEEeCCEEEEEeCC
Confidence 0000011122222 11222223322 3458999987653 5667888899999999999999999876
Q ss_pred ce
Q psy505 157 EE 158 (161)
Q Consensus 157 ~~ 158 (161)
..
T Consensus 158 ~f 159 (275)
T PF00780_consen 158 GF 159 (275)
T ss_pred ce
Confidence 53
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >COG5170 CDC55 Serine/threonine protein phosphatase 2A, regulatory subunit [Signal transduction mechanisms] | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.19 Score=40.87 Aligned_cols=133 Identities=14% Similarity=0.214 Sum_probs=81.0
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC-Cc----eeeeeccCccce------------eee---------e
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-HA----KTMIPAHDSPLA------------ALA---------S 66 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-~~----~~~l~~H~~~V~------------~l~---------~ 66 (161)
+..-+.++-|+..|.|+|++.- .|.|.++.-..- .| ...||+|+-+-- .+. +
T Consensus 25 ead~ItaVefd~tg~YlatGDk--gGRVvlfer~~s~~ceykf~teFQshe~EFDYLkSleieEKin~I~w~~~t~r~hF 102 (460)
T COG5170 25 EADKITAVEFDETGLYLATGDK--GGRVVLFEREKSYGCEYKFFTEFQSHELEFDYLKSLEIEEKINAIEWFDDTGRNHF 102 (460)
T ss_pred ccceeeEEEeccccceEeecCC--CceEEEeecccccccchhhhhhhcccccchhhhhhccHHHHhhheeeecCCCcceE
Confidence 4456889999999999998432 589999975542 23 345788875432 222 6
Q ss_pred EEEecCCceEEEEeCCcC-------------------ce---eeEE----eec--------------CcceEEEEEeecC
Q psy505 67 LSVGTKSGYRLFSLNSID-------------------TL---EQIY----ENS--------------QEDVCIVERLFSS 106 (161)
Q Consensus 67 lasgs~dgiriwd~~~~~-------------------~~---~~~~----~~~--------------~~~~~v~~~~fs~ 106 (161)
|.++-+..||||-++... ++ .+++ ..| .++..+.++.|.+
T Consensus 103 LlstNdktiKlWKiyeknlk~va~nnls~~~~~~~~g~~~s~~~l~lprls~hd~iiaa~p~rvyaNaH~yhiNSiS~Ns 182 (460)
T COG5170 103 LLSTNDKTIKLWKIYEKNLKVVAENNLSDSFHSPMGGPLTSTKELLLPRLSEHDEIIAAKPCRVYANAHPYHINSISFNS 182 (460)
T ss_pred EEecCCceeeeeeeecccchhhhccccccccccccCCCcCCHHHhhcccccccceEEEeccceeccccceeEeeeeeecC
Confidence 666666669999886430 00 0000 011 1234566788888
Q ss_pred CeEEEEecCCCCeEEEEecCCCCe---EEEEEec------CceEEEEECCc
Q psy505 107 SLVAVVSLSSPRKLTVCHFKRGSE---ICNYSFS------NTILAVKLNRK 148 (161)
Q Consensus 107 ~~~~~~s~~~d~~i~iWD~~~~~~---i~~l~~~------~~V~~v~~~~~ 148 (161)
+...+.|+ +|=.|.+|++..-.. |..+... .-|.+..|+|.
T Consensus 183 D~et~lSa-DdLrINLWnl~i~D~sFnIVDiKP~nmeeLteVItSaeFhp~ 232 (460)
T COG5170 183 DKETLLSA-DDLRINLWNLEIIDGSFNIVDIKPHNMEELTEVITSAEFHPE 232 (460)
T ss_pred chheeeec-cceeeeeccccccCCceEEEeccCccHHHHHHHHhhcccCHh
Confidence 88777776 566799999875321 1122211 24677777775
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=95.10 E-value=1.4 Score=35.36 Aligned_cols=125 Identities=12% Similarity=0.205 Sum_probs=64.3
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-cee--eeeccCccceeee----eEEEecC-CceEEEEeCC-cCc
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-AKT--MIPAHDSPLAALA----SLSVGTK-SGYRLFSLNS-IDT 85 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-~~~--~l~~H~~~V~~l~----~lasgs~-dgiriwd~~~-~~~ 85 (161)
..|.+++.- +|.++++. .+.|.+|++...+ ... .+..+ ..+.++. +++.|.. +++-++..+. +..
T Consensus 89 g~V~ai~~~-~~~lv~~~----g~~l~v~~l~~~~~l~~~~~~~~~-~~i~sl~~~~~~I~vgD~~~sv~~~~~~~~~~~ 162 (321)
T PF03178_consen 89 GPVTAICSF-NGRLVVAV----GNKLYVYDLDNSKTLLKKAFYDSP-FYITSLSVFKNYILVGDAMKSVSLLRYDEENNK 162 (321)
T ss_dssp S-EEEEEEE-TTEEEEEE----TTEEEEEEEETTSSEEEEEEE-BS-SSEEEEEEETTEEEEEESSSSEEEEEEETTTE-
T ss_pred CcceEhhhh-CCEEEEee----cCEEEEEEccCcccchhhheecce-EEEEEEeccccEEEEEEcccCEEEEEEEccCCE
Confidence 346666654 45555543 3689999999877 322 22232 2566666 7777765 4577775443 222
Q ss_pred eeeEEeecCcceEEEEEeecCCe-EEEEecCCCCeEEEEecCC-------CC-eE---EEEEecCceEEE---EECC
Q psy505 86 LEQIYENSQEDVCIVERLFSSSL-VAVVSLSSPRKLTVCHFKR-------GS-EI---CNYSFSNTILAV---KLNR 147 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~-~~~~s~~~d~~i~iWD~~~-------~~-~i---~~l~~~~~V~~v---~~~~ 147 (161)
+..+-+. ..+.++.++.|-++. ..++ ++.++.+.++.... ++ .+ ..+...+.|.++ .+.|
T Consensus 163 l~~va~d-~~~~~v~~~~~l~d~~~~i~-~D~~gnl~~l~~~~~~~~~~~~~~~L~~~~~f~lg~~v~~~~~~~l~~ 237 (321)
T PF03178_consen 163 LILVARD-YQPRWVTAAEFLVDEDTIIV-GDKDGNLFVLRYNPEIPNSRDGDPKLERISSFHLGDIVNSFRRGSLIP 237 (321)
T ss_dssp EEEEEEE-SS-BEEEEEEEE-SSSEEEE-EETTSEEEEEEE-SS-SSTTTTTTBEEEEEEEE-SS-EEEEEE--SS-
T ss_pred EEEEEec-CCCccEEEEEEecCCcEEEE-EcCCCeEEEEEECCCCcccccccccceeEEEEECCCccceEEEEEeee
Confidence 4333332 234566666665333 4444 44667888887652 22 23 233346778877 5544
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PF10282 Lactonase: Lactonase, 7-bladed beta-propeller; InterPro: IPR019405 6-phosphogluconolactonases (6PGL) 3 | Back alignment and domain information |
|---|
Probab=95.08 E-value=1.5 Score=35.66 Aligned_cols=147 Identities=18% Similarity=0.189 Sum_probs=77.2
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCC--CcceEEEEEcCCC--C--ceeeee-ccCccceeee------eEEE
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSN--SIGEVQIFDADNL--H--AKTMIP-AHDSPLAALA------SLSV 69 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~--~dg~v~iWd~~~~--~--~~~~l~-~H~~~V~~l~------~las 69 (161)
++.+. ....+|.. |+++|++.+|-+.... .+|.|..|++... + .+.... .-..|+ .++ +|.+
T Consensus 29 ~~~~~-~~~~~Ps~---l~~~~~~~~LY~~~e~~~~~g~v~~~~i~~~~g~L~~~~~~~~~g~~p~-~i~~~~~g~~l~v 103 (345)
T PF10282_consen 29 LVQTV-AEGENPSW---LAVSPDGRRLYVVNEGSGDSGGVSSYRIDPDTGTLTLLNSVPSGGSSPC-HIAVDPDGRFLYV 103 (345)
T ss_dssp EEEEE-EESSSECC---EEE-TTSSEEEEEETTSSTTTEEEEEEEETTTTEEEEEEEEEESSSCEE-EEEECTTSSEEEE
T ss_pred Eeeee-cCCCCCce---EEEEeCCCEEEEEEccccCCCCEEEEEECCCcceeEEeeeeccCCCCcE-EEEEecCCCEEEE
Confidence 33444 34455543 3447777666554431 2689999988764 2 233333 122222 233 5555
Q ss_pred ec-CCc-eEEEEeCCcCceeeE---Ee--ec------CcceEEEEEeecCCeE-EEEecCCCCeEEEEecCCCC--eE--
Q psy505 70 GT-KSG-YRLFSLNSIDTLEQI---YE--NS------QEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGS--EI-- 131 (161)
Q Consensus 70 gs-~dg-iriwd~~~~~~~~~~---~~--~~------~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~--~i-- 131 (161)
+. .+| +.++++.....+... .. +. .......++.|+|++. .++..-....|.+|++.... ..
T Consensus 104 any~~g~v~v~~l~~~g~l~~~~~~~~~~g~g~~~~rq~~~h~H~v~~~pdg~~v~v~dlG~D~v~~~~~~~~~~~l~~~ 183 (345)
T PF10282_consen 104 ANYGGGSVSVFPLDDDGSLGEVVQTVRHEGSGPNPDRQEGPHPHQVVFSPDGRFVYVPDLGADRVYVYDIDDDTGKLTPV 183 (345)
T ss_dssp EETTTTEEEEEEECTTSEEEEEEEEEESEEEESSTTTTSSTCEEEEEE-TTSSEEEEEETTTTEEEEEEE-TTS-TEEEE
T ss_pred EEccCCeEEEEEccCCcccceeeeecccCCCCCcccccccccceeEEECCCCCEEEEEecCCCEEEEEEEeCCCceEEEe
Confidence 54 466 999999763222222 11 10 0112355778999754 34443334579999998765 32
Q ss_pred EEEEe--cCceEEEEECCc--EEEEEe
Q psy505 132 CNYSF--SNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 132 ~~l~~--~~~V~~v~~~~~--~~vv~~ 154 (161)
..+.. .+.-..+.|+|+ .+.|+.
T Consensus 184 ~~~~~~~G~GPRh~~f~pdg~~~Yv~~ 210 (345)
T PF10282_consen 184 DSIKVPPGSGPRHLAFSPDGKYAYVVN 210 (345)
T ss_dssp EEEECSTTSSEEEEEE-TTSSEEEEEE
T ss_pred eccccccCCCCcEEEEcCCcCEEEEec
Confidence 22333 367888999998 455554
|
1.1.31 from EC, which hydrolyses 6-phosphogluconolactone to 6-phosphogluconate is opne of the enzymes in the pentose phosphate pathway. Two families of structurally dissimilar 6PGLs are known to exist: the Escherichia coli (strain K12) YbhE IPR022528 from INTERPRO [] and the Pseudomonas aeruginosa DevB IPR005900 from INTERPRO [] types. This entry contains bacterial 6-phosphogluconolactonases (6PGL) YbhE-type 3.1.1.31 from EC which hydrolyse 6-phosphogluconolactone to 6-phosphogluconate. The entry also contains the fungal muconate lactonizing enzyme carboxy-cis,cis-muconate cyclase 5.5.1.5 from EC and muconate cycloisomerase 5.5.1.1 from EC, which convert cis,cis-muconates to muconolactones and vice versa as part of the microbial beta-ketoadipate pathway. Structures have been reported for the E. coli 6-phosphogluconolactonase and Neurospora crassa muconate cycloisomerase. Structures of proteins in this family have revealed a 7-bladed beta-propeller fold [].; PDB: 3SCY_A 1L0Q_A 3HFQ_B 3FGB_A 1RI6_A 3U4Y_A 3BWS_A 1JOF_H. |
| >KOG2314|consensus | Back alignment and domain information |
|---|
Probab=95.03 E-value=0.23 Score=43.03 Aligned_cols=128 Identities=6% Similarity=0.007 Sum_probs=75.8
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEec----------CCc--eEEEEe
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGT----------KSG--YRLFSL 80 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs----------~dg--iriwd~ 80 (161)
-+.++|-|.||++-. -.-|.+|--.+...++.| .|.+ |.-+. ||+|=| .+| +.|||+
T Consensus 215 yv~wSP~GTYL~t~H---k~GI~lWGG~~f~r~~RF-~Hp~-Vq~idfSP~EkYLVT~s~~p~~~~~~d~e~~~l~IWDI 289 (698)
T KOG2314|consen 215 YVRWSPKGTYLVTFH---KQGIALWGGESFDRIQRF-YHPG-VQFIDFSPNEKYLVTYSPEPIIVEEDDNEGQQLIIWDI 289 (698)
T ss_pred eEEecCCceEEEEEe---ccceeeecCccHHHHHhc-cCCC-ceeeecCCccceEEEecCCccccCcccCCCceEEEEEc
Confidence 456688999999854 356889987776666666 3554 33222 666544 134 999999
Q ss_pred CCcCceeeEEeecCcceE-EEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-cCceEEEEECCcEEEEE
Q psy505 81 NSIDTLEQIYENSQEDVC-IVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-SNTILAVKLNRKKEEEE 153 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~-v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~~~vv~ 153 (161)
+||... +.+.-..++.. -.-+-||.|..++|-... ++|.|++...=.++..=.. .+.|....|+|...+++
T Consensus 290 ~tG~lk-rsF~~~~~~~~~WP~frWS~DdKy~Arm~~-~sisIyEtpsf~lld~Kslki~gIr~FswsP~~~llA 362 (698)
T KOG2314|consen 290 ATGLLK-RSFPVIKSPYLKWPIFRWSHDDKYFARMTG-NSISIYETPSFMLLDKKSLKISGIRDFSWSPTSNLLA 362 (698)
T ss_pred cccchh-cceeccCCCccccceEEeccCCceeEEecc-ceEEEEecCceeeecccccCCccccCcccCCCcceEE
Confidence 999754 33322111111 123456776666665433 6899999765221111111 36777778888755554
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=94.96 E-value=1.6 Score=35.35 Aligned_cols=132 Identities=9% Similarity=0.036 Sum_probs=77.2
Q ss_pred EeecCC-CceEEEEcCCCCcce-EEEEEcCCCCceeeeeccCcc------ceeee---eEEEec----CCc-eEEEEeCC
Q psy505 19 CLCVNS-DNCYLAYPGSNSIGE-VQIFDADNLHAKTMIPAHDSP------LAALA---SLSVGT----KSG-YRLFSLNS 82 (161)
Q Consensus 19 ~~~~~~-d~~~la~~g~~~dg~-v~iWd~~~~~~~~~l~~H~~~------V~~l~---~lasgs----~dg-iriwd~~~ 82 (161)
+++++| ++..+|.+ .. .|+ ..+||.++++.++.+.+..+. +.+-. +++|=. ..| |-|||.+.
T Consensus 9 ~~a~~p~~~~avafa-RR-PG~~~~v~D~~~g~~~~~~~a~~gRHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~ 86 (305)
T PF07433_consen 9 GVAAHPTRPEAVAFA-RR-PGTFALVFDCRTGQLLQRLWAPPGRHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAAR 86 (305)
T ss_pred ceeeCCCCCeEEEEE-eC-CCcEEEEEEcCCCceeeEEcCCCCCEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcC
Confidence 455677 44455553 33 554 788999999888776543322 22222 444422 346 99999974
Q ss_pred cCceeeEEeecCcceEEEEEeecCCe--EEEEec----------------CCCCeEEEEecCCCCeEEEEEe-----cCc
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSL--VAVVSL----------------SSPRKLTVCHFKRGSEICNYSF-----SNT 139 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~--~~~~s~----------------~~d~~i~iWD~~~~~~i~~l~~-----~~~ 139 (161)
+-.....+..|. +.=-++.+.|++ ++++-| .-+-.|.+-|.++|+.+..... ...
T Consensus 87 ~~~ri~E~~s~G--IGPHel~l~pDG~tLvVANGGI~Thpd~GR~kLNl~tM~psL~~ld~~sG~ll~q~~Lp~~~~~lS 164 (305)
T PF07433_consen 87 GYRRIGEFPSHG--IGPHELLLMPDGETLVVANGGIETHPDSGRAKLNLDTMQPSLVYLDARSGALLEQVELPPDLHQLS 164 (305)
T ss_pred CcEEEeEecCCC--cChhhEEEcCCCCEEEEEcCCCccCcccCceecChhhcCCceEEEecCCCceeeeeecCccccccc
Confidence 321112222222 222366778888 333322 1122477778999998877443 357
Q ss_pred eEEEEECCcEEEEEe
Q psy505 140 ILAVKLNRKKEEEED 154 (161)
Q Consensus 140 V~~v~~~~~~~vv~~ 154 (161)
+.-+++++++.|++-
T Consensus 165 iRHLa~~~~G~V~~a 179 (305)
T PF07433_consen 165 IRHLAVDGDGTVAFA 179 (305)
T ss_pred eeeEEecCCCcEEEE
Confidence 888999999777654
|
|
| >PF15492 Nbas_N: Neuroblastoma-amplified sequence, N terminal | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.046 Score=43.41 Aligned_cols=47 Identities=15% Similarity=0.270 Sum_probs=38.6
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCc
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS 59 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~ 59 (161)
..+.++|..|+.+|||..||+-.. +|.|-||++.+-+....+.-++.
T Consensus 226 ~~~~d~i~kmSlSPdg~~La~ih~--sG~lsLW~iPsL~~~~~W~~~eq 272 (282)
T PF15492_consen 226 GQEQDGIFKMSLSPDGSLLACIHF--SGSLSLWEIPSLRLQRSWKQDEQ 272 (282)
T ss_pred ccCCCceEEEEECCCCCEEEEEEc--CCeEEEEecCcchhhcccchhhC
Confidence 456779999999999999999776 89999999999877766654443
|
|
| >PF08553 VID27: VID27 cytoplasmic protein; InterPro: IPR013863 This entry represents fungal and plant proteins and contains many hypothetical proteins | Back alignment and domain information |
|---|
Probab=94.85 E-value=0.9 Score=41.36 Aligned_cols=119 Identities=10% Similarity=0.081 Sum_probs=76.6
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCcc-ceeee------------eEEEecCCc-eEEEEeCCc-CceeeE
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP-LAALA------------SLSVGTKSG-YRLFSLNSI-DTLEQI 89 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~-V~~l~------------~lasgs~dg-iriwd~~~~-~~~~~~ 89 (161)
|..+|..... +...+.-.|++.|+.+..+..|.+. |.+++ .|. |-.+. +-.||.|-. .++..
T Consensus 492 d~~mil~~~~-~~~~ly~mDLe~GKVV~eW~~~~~~~v~~~~p~~K~aqlt~e~tfl-Gls~n~lfriDpR~~~~k~v~- 568 (794)
T PF08553_consen 492 DRNMILLDPN-NPNKLYKMDLERGKVVEEWKVHDDIPVVDIAPDSKFAQLTNEQTFL-GLSDNSLFRIDPRLSGNKLVD- 568 (794)
T ss_pred ccceEeecCC-CCCceEEEecCCCcEEEEeecCCCcceeEecccccccccCCCceEE-EECCCceEEeccCCCCCceee-
Confidence 4445555444 2577999999999999999998865 77776 343 44444 888998863 22211
Q ss_pred EeecC--cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeE-EEEE-ecCceEEEEECCc
Q psy505 90 YENSQ--EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEI-CNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 90 ~~~~~--~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i-~~l~-~~~~V~~v~~~~~ 148 (161)
-+++. ......+++-+.+|...+ |+.++.||+||- .|+.. ..|. ..++|.+|..+.|
T Consensus 569 ~~~k~Y~~~~~Fs~~aTt~~G~iav-gs~~G~IRLyd~-~g~~AKT~lp~lG~pI~~iDvt~D 629 (794)
T PF08553_consen 569 SQSKQYSSKNNFSCFATTEDGYIAV-GSNKGDIRLYDR-LGKRAKTALPGLGDPIIGIDVTAD 629 (794)
T ss_pred ccccccccCCCceEEEecCCceEEE-EeCCCcEEeecc-cchhhhhcCCCCCCCeeEEEecCC
Confidence 11221 122345666677776544 457889999994 44332 2332 4689999999887
|
Vid27p is a cytoplasmic protein of unknown function, possibly regulates import of fructose-1,6-bisphosphatase into Vacuolar Import and Degradation (Vid) vesicles and is not essential for proteasome-dependent degradation of fructose-1,6-bisphosphatase (FBPase) [, ]. |
| >KOG1645|consensus | Back alignment and domain information |
|---|
Probab=94.76 E-value=0.17 Score=42.21 Aligned_cols=87 Identities=11% Similarity=0.180 Sum_probs=63.6
Q ss_pred EEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEE
Q psy505 40 VQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAV 111 (161)
Q Consensus 40 v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~ 111 (161)
|+..+..+.+....+.+|...|++++ ++..+|-+. |+|.|+++.... ..+..+. .++.+++.... .-.+
T Consensus 175 v~~l~~~~fkssq~lp~~g~~IrdlafSp~~~GLl~~asl~nkiki~dlet~~~v-ssy~a~~-~~wSC~wDlde-~h~I 251 (463)
T KOG1645|consen 175 VQKLESHDFKSSQILPGEGSFIRDLAFSPFNEGLLGLASLGNKIKIMDLETSCVV-SSYIAYN-QIWSCCWDLDE-RHVI 251 (463)
T ss_pred eEEeccCCcchhhcccccchhhhhhccCccccceeeeeccCceEEEEecccceee-eheeccC-CceeeeeccCC-ccee
Confidence 78888888888888899999999999 788898888 999999985433 3444443 44555544333 3345
Q ss_pred EecCCCCeEEEEecCCCC
Q psy505 112 VSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 112 ~s~~~d~~i~iWD~~~~~ 129 (161)
..|...+.|-|||++..+
T Consensus 252 YaGl~nG~VlvyD~R~~~ 269 (463)
T KOG1645|consen 252 YAGLQNGMVLVYDMRQPE 269 (463)
T ss_pred EEeccCceEEEEEccCCC
Confidence 556677889999998643
|
|
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=94.73 E-value=0.89 Score=31.32 Aligned_cols=54 Identities=15% Similarity=0.241 Sum_probs=39.2
Q ss_pred cCCCc-eEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCc-eEEEEe
Q psy505 22 VNSDN-CYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 22 ~~~d~-~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~ 80 (161)
++.|| ..|+.++. |..||+|+-. ..+.++..+ +.|.+++ .|+.|.++| |.+|+-
T Consensus 10 ~d~dg~~eLlvGs~--D~~IRvf~~~--e~~~Ei~e~-~~v~~L~~~~~~~F~Y~l~NGTVGvY~~ 70 (111)
T PF14783_consen 10 FDGDGENELLVGSD--DFEIRVFKGD--EIVAEITET-DKVTSLCSLGGGRFAYALANGTVGVYDR 70 (111)
T ss_pred cCCCCcceEEEecC--CcEEEEEeCC--cEEEEEecc-cceEEEEEcCCCEEEEEecCCEEEEEeC
Confidence 34444 34555443 9999999854 667777764 5577777 899999999 999986
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=94.67 E-value=1.8 Score=40.22 Aligned_cols=139 Identities=10% Similarity=0.104 Sum_probs=87.2
Q ss_pred CCceeEEeecCCCceEEEEcCC--CCc--ceEEEEEcCCCCceeeeeccCccceeee----------eEEEecC---Cc-
Q psy505 13 NPNGICCLCVNSDNCYLAYPGS--NSI--GEVQIFDADNLHAKTMIPAHDSPLAALA----------SLSVGTK---SG- 74 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~--~~d--g~v~iWd~~~~~~~~~l~~H~~~V~~l~----------~lasgs~---dg- 74 (161)
..++-..+++-.||.++|.+.- ... ..+|||+-+ |. |+.-..+|..+. ++|+... +.
T Consensus 208 ~dd~~~~ISWRGDG~yFAVss~~~~~~~~R~iRVy~Re-G~----L~stSE~v~gLe~~l~WrPsG~lIA~~q~~~~~~~ 282 (928)
T PF04762_consen 208 WDDGRVRISWRGDGEYFAVSSVEPETGSRRVIRVYSRE-GE----LQSTSEPVDGLEGALSWRPSGNLIASSQRLPDRHD 282 (928)
T ss_pred cCCCceEEEECCCCcEEEEEEEEcCCCceeEEEEECCC-ce----EEeccccCCCccCCccCCCCCCEEEEEEEcCCCcE
Confidence 3447778999999999998763 212 479999965 43 454455666554 6776654 22
Q ss_pred eEEEEeCCcCceeeEE-eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC--eEEEEEec--CceEEEEECCc-
Q psy505 75 YRLFSLNSIDTLEQIY-ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS--EICNYSFS--NTILAVKLNRK- 148 (161)
Q Consensus 75 iriwd~~~~~~~~~~~-~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~--~i~~l~~~--~~V~~v~~~~~- 148 (161)
|-+|.- +|-...++- +.......+..+.|++++-.++-.-.| .|++|-..+-. ..+++.|+ ..+..++|+|.
T Consensus 283 VvFfEr-NGLrhgeF~l~~~~~~~~v~~l~Wn~ds~iLAv~~~~-~vqLWt~~NYHWYLKqei~~~~~~~~~~~~Wdpe~ 360 (928)
T PF04762_consen 283 VVFFER-NGLRHGEFTLRFDPEEEKVIELAWNSDSEILAVWLED-RVQLWTRSNYHWYLKQEIRFSSSESVNFVKWDPEK 360 (928)
T ss_pred EEEEec-CCcEeeeEecCCCCCCceeeEEEECCCCCEEEEEecC-CceEEEeeCCEEEEEEEEEccCCCCCCceEECCCC
Confidence 777763 332211111 110123468899999877766654444 49999887653 44566664 34666999775
Q ss_pred --EEEEEec-cce
Q psy505 149 --KEEEEDE-EEE 158 (161)
Q Consensus 149 --~~vv~~~-~~~ 158 (161)
++.+.+. +++
T Consensus 361 p~~L~v~t~~g~~ 373 (928)
T PF04762_consen 361 PLRLHVLTSNGQY 373 (928)
T ss_pred CCEEEEEecCCcE
Confidence 7888777 544
|
|
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=94.59 E-value=2.2 Score=35.22 Aligned_cols=116 Identities=9% Similarity=0.027 Sum_probs=67.4
Q ss_pred cceEEEEEcCCCCceeeeeccCccceee--e--eEEEecCCc-eEEEEeCCcCceeeEEeecC-cceEEEEEeecCCeEE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAAL--A--SLSVGTKSG-YRLFSLNSIDTLEQIYENSQ-EDVCIVERLFSSSLVA 110 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l--~--~lasgs~dg-iriwd~~~~~~~~~~~~~~~-~~~~v~~~~fs~~~~~ 110 (161)
+|.+.-.|+.+|+.+...+-. ....+ . .+..++.+| +..+|.++|+.+ ++... ......+.....+.++
T Consensus 265 ~g~l~ald~~tG~~~W~~~~~--~~~~~~~~~~~vy~~~~~g~l~ald~~tG~~~---W~~~~~~~~~~~sp~v~~g~l~ 339 (394)
T PRK11138 265 NGNLVALDLRSGQIVWKREYG--SVNDFAVDGGRIYLVDQNDRVYALDTRGGVEL---WSQSDLLHRLLTAPVLYNGYLV 339 (394)
T ss_pred CCeEEEEECCCCCEEEeecCC--CccCcEEECCEEEEEcCCCeEEEEECCCCcEE---EcccccCCCcccCCEEECCEEE
Confidence 799999999999877654321 11111 1 555667788 999999988643 22111 0000111112233333
Q ss_pred EEecCCCCeEEEEecCCCCeEEEEEec-CceEE-EEECCcEEEEEecc-cee
Q psy505 111 VVSLSSPRKLTVCHFKRGSEICNYSFS-NTILA-VKLNRKKEEEEDEE-EEK 159 (161)
Q Consensus 111 ~~s~~~d~~i~iWD~~~~~~i~~l~~~-~~V~~-v~~~~~~~vv~~~~-~~~ 159 (161)
+. +.++.|...|.++|+.+-++... ..+.+ -.+..++++|...+ +++
T Consensus 340 -v~-~~~G~l~~ld~~tG~~~~~~~~~~~~~~s~P~~~~~~l~v~t~~G~l~ 389 (394)
T PRK11138 340 -VG-DSEGYLHWINREDGRFVAQQKVDSSGFLSEPVVADDKLLIQARDGTVY 389 (394)
T ss_pred -EE-eCCCEEEEEECCCCCEEEEEEcCCCcceeCCEEECCEEEEEeCCceEE
Confidence 33 35778999999999988777542 33332 23345677777665 444
|
|
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=94.52 E-value=0.23 Score=42.03 Aligned_cols=104 Identities=18% Similarity=0.163 Sum_probs=70.7
Q ss_pred EEEEcCCCCcceEEEEEcCCCCc-eeee-eccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEee------
Q psy505 28 YLAYPGSNSIGEVQIFDADNLHA-KTMI-PAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYEN------ 92 (161)
Q Consensus 28 ~la~~g~~~dg~v~iWd~~~~~~-~~~l-~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~------ 92 (161)
.+|.+.. .+|.+.++|-....| ...+ .-|.+||..+. .+.|....| |.-|..+. ++ +..+.
T Consensus 113 ~IAVs~~-~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~Ds~vSiD~~gmVEyWs~e~--~~-qfPr~~l~~~~ 188 (558)
T KOG0882|consen 113 LIAVSLF-KSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGDSAVSIDISGMVEYWSAEG--PF-QFPRTNLNFEL 188 (558)
T ss_pred eEEeecc-cCCCcEEECCcCCcCccceecccccCceEEEEeeccccceeeccccceeEeecCCC--cc-cCccccccccc
Confidence 4555444 489999999876653 3333 45999999887 566666678 99999852 11 11111
Q ss_pred -c--------CcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 93 -S--------QEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 93 -~--------~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
| .....-.++.|+|++..+..-..|+.|+++++++|+.++++.
T Consensus 189 K~eTdLy~f~K~Kt~pts~Efsp~g~qistl~~DrkVR~F~~KtGklvqeiD 240 (558)
T KOG0882|consen 189 KHETDLYGFPKAKTEPTSFEFSPDGAQISTLNPDRKVRGFVFKTGKLVQEID 240 (558)
T ss_pred cccchhhcccccccCccceEEccccCcccccCcccEEEEEEeccchhhhhhh
Confidence 1 011223467789888777766789999999999999887763
|
|
| >PF02897 Peptidase_S9_N: Prolyl oligopeptidase, N-terminal beta-propeller domain; InterPro: IPR004106 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families | Back alignment and domain information |
|---|
Probab=94.50 E-value=2.4 Score=35.14 Aligned_cols=138 Identities=14% Similarity=0.075 Sum_probs=73.3
Q ss_pred eEEeecCCCceEEEEcCCC---CcceEEEEEcCCCCceee-eeccCccceeee-------eEEEecCC---------c--
Q psy505 17 ICCLCVNSDNCYLAYPGSN---SIGEVQIFDADNLHAKTM-IPAHDSPLAALA-------SLSVGTKS---------G-- 74 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~---~dg~v~iWd~~~~~~~~~-l~~H~~~V~~l~-------~lasgs~d---------g-- 74 (161)
+-.++++|||.++|++-+. +..++++.|+.+|+.+.. |..-.. .+++ ++.+..++ .
T Consensus 126 ~~~~~~Spdg~~la~~~s~~G~e~~~l~v~Dl~tg~~l~d~i~~~~~--~~~~W~~d~~~~~y~~~~~~~~~~~~~~~~~ 203 (414)
T PF02897_consen 126 LGGFSVSPDGKRLAYSLSDGGSEWYTLRVFDLETGKFLPDGIENPKF--SSVSWSDDGKGFFYTRFDEDQRTSDSGYPRQ 203 (414)
T ss_dssp EEEEEETTTSSEEEEEEEETTSSEEEEEEEETTTTEEEEEEEEEEES--EEEEECTTSSEEEEEECSTTTSS-CCGCCEE
T ss_pred eeeeeECCCCCEEEEEecCCCCceEEEEEEECCCCcCcCCccccccc--ceEEEeCCCCEEEEEEeCcccccccCCCCcE
Confidence 3467789999999976321 234699999999976542 232111 1133 44444332 3
Q ss_pred eEEEEeCCcCce-eeEEeecCcceEEEEEeecCCeEEEE--e-cCCC-CeEEEEecCCC----CeEEEEE--ecCceEEE
Q psy505 75 YRLFSLNSIDTL-EQIYENSQEDVCIVERLFSSSLVAVV--S-LSSP-RKLTVCHFKRG----SEICNYS--FSNTILAV 143 (161)
Q Consensus 75 iriwd~~~~~~~-~~~~~~~~~~~~v~~~~fs~~~~~~~--s-~~~d-~~i~iWD~~~~----~~i~~l~--~~~~V~~v 143 (161)
++.|.+.+...- ..++++..+......+..++++.++. + ...+ +.+.+-|...+ .....+. ..+....+
T Consensus 204 v~~~~~gt~~~~d~lvfe~~~~~~~~~~~~~s~d~~~l~i~~~~~~~~s~v~~~d~~~~~~~~~~~~~l~~~~~~~~~~v 283 (414)
T PF02897_consen 204 VYRHKLGTPQSEDELVFEEPDEPFWFVSVSRSKDGRYLFISSSSGTSESEVYLLDLDDGGSPDAKPKLLSPREDGVEYYV 283 (414)
T ss_dssp EEEEETTS-GGG-EEEEC-TTCTTSEEEEEE-TTSSEEEEEEESSSSEEEEEEEECCCTTTSS-SEEEEEESSSS-EEEE
T ss_pred EEEEECCCChHhCeeEEeecCCCcEEEEEEecCcccEEEEEEEccccCCeEEEEeccccCCCcCCcEEEeCCCCceEEEE
Confidence 777777654321 24666655444245666776554332 2 2333 56888898875 2223332 23344456
Q ss_pred EECCcEEEEEecc
Q psy505 144 KLNRKKEEEEDEE 156 (161)
Q Consensus 144 ~~~~~~~vv~~~~ 156 (161)
....+.+.+.+.+
T Consensus 284 ~~~~~~~yi~Tn~ 296 (414)
T PF02897_consen 284 DHHGDRLYILTND 296 (414)
T ss_dssp EEETTEEEEEE-T
T ss_pred EccCCEEEEeeCC
Confidence 5566666666554
|
Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This entry represents the beta-propeller domain found at the N-terminal of prolyl oligopeptidase, including acylamino-acid-releasing enzyme (also known as acylaminoacyl peptidase), which belong to the MEROPS peptidase family S9 (clan SC), subfamily S9A. The prolyl oligopeptidase family consist of a number of evolutionary related peptidases whose catalytic activity seems to be provided by a charge relay system similar to that of the trypsin family of serine proteases, but which evolved by independent convergent evolution. The N-terminal domain of prolyl oligopeptidases form an unusual 7-bladed beta-propeller consisting of seven 4-stranded beta-sheet motifs. Prolyl oligopeptidase is a large cytosolic enzyme involved in the maturation and degradation of peptide hormones and neuropeptides, which relate to the induction of amnesia. The enzyme contains a peptidase domain, where its catalytic triad (Ser554, His680, Asp641) is covered by the central tunnel of the N-terminal beta-propeller domain. In this way, large structured peptides are excluded from the active site, thereby protecting larger peptides and proteins from proteolysis in the cytosol []. The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Mammalian acylaminoacyl peptidase is an exopeptidase that is a member of the same prolyl oligopeptidase family of serine peptidases. This enzyme removes acylated amino acid residues from the N terminus of oligopeptides [].; GO: 0004252 serine-type endopeptidase activity, 0006508 proteolysis; PDB: 2BKL_B 3DDU_A 1YR2_A 2XE4_A 1VZ3_A 3EQ9_A 1O6F_A 3EQ7_A 4AN0_A 1UOP_A .... |
| >KOG0882|consensus | Back alignment and domain information |
|---|
Probab=94.12 E-value=0.12 Score=43.82 Aligned_cols=134 Identities=13% Similarity=0.086 Sum_probs=83.3
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC--C-CceeeeeccCccceeee------eEEEecC-Cc-eEEEEe
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN--L-HAKTMIPAHDSPLAALA------SLSVGTK-SG-YRLFSL 80 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~--~-~~~~~l~~H~~~V~~l~------~lasgs~-dg-iriwd~ 80 (161)
.|.+-+..+.+.- ..++.+++- ||++|.|--.. | +-+..+.+|-..|.+++ ++.|.++ |. +|++|+
T Consensus 7 mhrd~i~hv~~tk-a~fiiqASl--DGh~KFWkKs~isGvEfVKhFraHL~~I~sl~~S~dg~L~~Sv~d~Dhs~KvfDv 83 (558)
T KOG0882|consen 7 MHRDVITHVFPTK-AKFIIQASL--DGHKKFWKKSRISGVEFVKHFRAHLGVILSLAVSYDGWLFRSVEDPDHSVKVFDV 83 (558)
T ss_pred cccceeeeEeeeh-hheEEeeec--chhhhhcCCCCccceeehhhhHHHHHHHHhhhccccceeEeeccCcccceeEEEe
Confidence 3444455554432 246666554 99999998543 2 24556789999999888 7778777 88 999999
Q ss_pred CCcCceeeEEeecCcceEEEEEeecCC---eEEEEecCCCCeEEEEecCCCCe-EEEEE--ecCceEEEEECCcEE
Q psy505 81 NSIDTLEQIYENSQEDVCIVERLFSSS---LVAVVSLSSPRKLTVCHFKRGSE-ICNYS--FSNTILAVKLNRKKE 150 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~fs~~---~~~~~s~~~d~~i~iWD~~~~~~-i~~l~--~~~~V~~v~~~~~~~ 150 (161)
++-++...+-...-+ .-.+..+++. ....+|..+++.+.|+|-.-.-| ..-+. |.++|..++++|..=
T Consensus 84 En~DminmiKL~~lP--g~a~wv~skGd~~s~IAVs~~~sg~i~VvD~~~d~~q~~~fkklH~sPV~~i~y~qa~D 157 (558)
T KOG0882|consen 84 ENFDMINMIKLVDLP--GFAEWVTSKGDKISLIAVSLFKSGKIFVVDGFGDFCQDGYFKKLHFSPVKKIRYNQAGD 157 (558)
T ss_pred eccchhhhcccccCC--CceEEecCCCCeeeeEEeecccCCCcEEECCcCCcCccceecccccCceEEEEeecccc
Confidence 876544211111111 1234445654 13345555677899999765542 33332 568999999988643
|
|
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=93.96 E-value=2.4 Score=37.62 Aligned_cols=85 Identities=11% Similarity=0.130 Sum_probs=50.1
Q ss_pred ceEEEEEcCC-----CCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCc------------eeeEEee
Q psy505 38 GEVQIFDADN-----LHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDT------------LEQIYEN 92 (161)
Q Consensus 38 g~v~iWd~~~-----~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~------------~~~~~~~ 92 (161)
+.|.+.|.++ .+.+..+.--. ....+. .++++-.+. +-|.|+++-+. ..+..-|
T Consensus 296 n~V~VID~~t~~~~~~~v~~yIPVGK-sPHGV~vSPDGkylyVanklS~tVSVIDv~k~k~~~~~~~~~~~~vvaevevG 374 (635)
T PRK02888 296 SKVPVVDGRKAANAGSALTRYVPVPK-NPHGVNTSPDGKYFIANGKLSPTVTVIDVRKLDDLFDGKIKPRDAVVAEPELG 374 (635)
T ss_pred CEEEEEECCccccCCcceEEEEECCC-CccceEECCCCCEEEEeCCCCCcEEEEEChhhhhhhhccCCccceEEEeeccC
Confidence 4577777776 23444444322 233343 444555566 99999976432 1111112
Q ss_pred cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCC
Q psy505 93 SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR 127 (161)
Q Consensus 93 ~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~ 127 (161)
-. + ..-+|.+++.+..|-.-|..|-.||+.+
T Consensus 375 lG-P---LHTaFDg~G~aytslf~dsqv~kwn~~~ 405 (635)
T PRK02888 375 LG-P---LHTAFDGRGNAYTTLFLDSQIVKWNIEA 405 (635)
T ss_pred CC-c---ceEEECCCCCEEEeEeecceeEEEehHH
Confidence 11 2 2346899988888888888999999886
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=93.88 E-value=0.22 Score=28.86 Aligned_cols=37 Identities=19% Similarity=0.281 Sum_probs=29.2
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCce
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAK 51 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~ 51 (161)
.-+..|..++++|...++|.+.. ||.|.|+.+ +++.+
T Consensus 9 ~l~~~v~~~~w~P~mdLiA~~t~--~g~v~v~Rl-~~qri 45 (47)
T PF12894_consen 9 NLPSRVSCMSWCPTMDLIALGTE--DGEVLVYRL-NWQRI 45 (47)
T ss_pred CCCCcEEEEEECCCCCEEEEEEC--CCeEEEEEC-CCcCc
Confidence 34456889999999999998665 999999999 45543
|
|
| >KOG2041|consensus | Back alignment and domain information |
|---|
Probab=93.86 E-value=0.17 Score=45.22 Aligned_cols=89 Identities=13% Similarity=0.171 Sum_probs=63.9
Q ss_pred eEEEecCCc-eEEEEeCCcCc--------------eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCe
Q psy505 66 SLSVGTKSG-YRLFSLNSIDT--------------LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE 130 (161)
Q Consensus 66 ~lasgs~dg-iriwd~~~~~~--------------~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~ 130 (161)
++|+|+.|| .|+-.+.+..+ ..+.++||.. +|.-+.|+.+...+.+.+.++.|.||=+-+|+=
T Consensus 28 yIAcgG~dGlLKVlKl~t~t~d~~~~glaa~snLsmNQtLeGH~~--sV~vvTWNe~~QKLTtSDt~GlIiVWmlykgsW 105 (1189)
T KOG2041|consen 28 YIACGGADGLLKVLKLGTDTTDLNKSGLAAASNLSMNQTLEGHNA--SVMVVTWNENNQKLTTSDTSGLIIVWMLYKGSW 105 (1189)
T ss_pred eEEeccccceeEEEEccccCCcccccccccccccchhhhhccCcc--eEEEEEeccccccccccCCCceEEEEeeecccH
Confidence 899999999 99987754321 1134567765 466678998888888888889999999988865
Q ss_pred EEEEE---ecCceEEEEECCc--EEEEEecc
Q psy505 131 ICNYS---FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 131 i~~l~---~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
..++. -.+.|.+..||-| ++.+|.+|
T Consensus 106 ~EEMiNnRnKSvV~SmsWn~dG~kIcIvYeD 136 (1189)
T KOG2041|consen 106 CEEMINNRNKSVVVSMSWNLDGTKICIVYED 136 (1189)
T ss_pred HHHHhhCcCccEEEEEEEcCCCcEEEEEEcc
Confidence 54443 2467888888776 56665554
|
|
| >PF05694 SBP56: 56kDa selenium binding protein (SBP56); InterPro: IPR008826 This family consists of several eukaryotic selenium binding proteins as well as three sequences from archaea | Back alignment and domain information |
|---|
Probab=93.78 E-value=1.8 Score=36.83 Aligned_cols=133 Identities=11% Similarity=0.161 Sum_probs=64.7
Q ss_pred CceEEEEcCCCCcceEEEEEcCCC----Cceeeeec---cC-------ccceeee---eEEEe--cCC----c-eEEEEe
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNL----HAKTMIPA---HD-------SPLAALA---SLSVG--TKS----G-YRLFSL 80 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~----~~~~~l~~---H~-------~~V~~l~---~lasg--s~d----g-iriwd~ 80 (161)
+..+|+.+|.. .+.|.|.|+.+- +..++++. ++ +.+.|+. +++|+ ..+ | +-+.|-
T Consensus 86 ~Rr~Li~PgL~-SsrIyviD~~~dPr~P~l~KvIe~~ev~~k~g~s~PHT~Hclp~G~imIS~lGd~~G~g~Ggf~llD~ 164 (461)
T PF05694_consen 86 ERRYLILPGLR-SSRIYVIDTKTDPRKPRLHKVIEPEEVFEKTGLSRPHTVHCLPDGRIMISALGDADGNGPGGFVLLDG 164 (461)
T ss_dssp -S-EEEEEBTT-T--EEEEE--S-TTS-EEEEEE-HHHHHHHH-EEEEEEEEE-SS--EEEEEEEETTS-S--EEEEE-T
T ss_pred cCCcEEeeeec-cCcEEEEECCCCCCCCceEeeeCHHHHHhhcCCCCCceeeecCCccEEEEeccCCCCCCCCcEEEEcC
Confidence 56799999985 889999999853 23344442 11 1123333 33332 222 3 778887
Q ss_pred CCcCceeeEEeecC-cceEEEEEeecCCeEEEEec--------------------CCCCeEEEEecCCCCeEEEEEec--
Q psy505 81 NSIDTLEQIYENSQ-EDVCIVERLFSSSLVAVVSL--------------------SSPRKLTVCHFKRGSEICNYSFS-- 137 (161)
Q Consensus 81 ~~~~~~~~~~~~~~-~~~~v~~~~fs~~~~~~~s~--------------------~~d~~i~iWD~~~~~~i~~l~~~-- 137 (161)
++-+.. ..++... ....-..+-|.|..-.++|. .-.++|++||.++++.++++...
T Consensus 165 ~tf~v~-g~We~~~~~~~~gYDfw~qpr~nvMiSSeWg~P~~~~~Gf~~~d~~~~~yG~~l~vWD~~~r~~~Q~idLg~~ 243 (461)
T PF05694_consen 165 ETFEVK-GRWEKDRGPQPFGYDFWYQPRHNVMISSEWGAPSMFEKGFNPEDLEAGKYGHSLHVWDWSTRKLLQTIDLGEE 243 (461)
T ss_dssp TT--EE-EE--SB-TT------EEEETTTTEEEE-B---HHHHTT---TTTHHHH-S--EEEEEETTTTEEEEEEES-TT
T ss_pred cccccc-ceeccCCCCCCCCCCeEEcCCCCEEEEeccCChhhcccCCChhHhhcccccCeEEEEECCCCcEeeEEecCCC
Confidence 664432 2332211 12233455566654445543 11368999999999999999864
Q ss_pred -CceEEEEE--CCc----EEEEEecccee
Q psy505 138 -NTILAVKL--NRK----KEEEEDEEEEK 159 (161)
Q Consensus 138 -~~V~~v~~--~~~----~~vv~~~~~~~ 159 (161)
..++.|+| +|+ ...+||..+|.
T Consensus 244 g~~pLEvRflH~P~~~~gFvg~aLss~i~ 272 (461)
T PF05694_consen 244 GQMPLEVRFLHDPDANYGFVGCALSSSIW 272 (461)
T ss_dssp EEEEEEEEE-SSTT--EEEEEEE--EEEE
T ss_pred CCceEEEEecCCCCccceEEEEeccceEE
Confidence 36889999 444 56666766654
|
The exact function of this protein is unknown although it is thought that SBP56 participates in late stages of intra-Golgi protein transport []. The Lotus japonicus homologue of SBP56, LjSBP is thought to have more than one physiological role and can be implicated in controlling the oxidation/reduction status of target proteins in vesicular Golgi transport [].; GO: 0008430 selenium binding; PDB: 2ECE_A. |
| >PF14783 BBS2_Mid: Ciliary BBSome complex subunit 2, middle region | Back alignment and domain information |
|---|
Probab=93.76 E-value=1.5 Score=30.20 Aligned_cols=52 Identities=15% Similarity=0.111 Sum_probs=27.7
Q ss_pred eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEe
Q psy505 66 SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCH 124 (161)
Q Consensus 66 ~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD 124 (161)
-|..||+|. ||+|+-. +.+.++-+.+ .+.++...+... ++-+...++|-+||
T Consensus 17 eLlvGs~D~~IRvf~~~--e~~~Ei~e~~----~v~~L~~~~~~~-F~Y~l~NGTVGvY~ 69 (111)
T PF14783_consen 17 ELLVGSDDFEIRVFKGD--EIVAEITETD----KVTSLCSLGGGR-FAYALANGTVGVYD 69 (111)
T ss_pred eEEEecCCcEEEEEeCC--cEEEEEeccc----ceEEEEEcCCCE-EEEEecCCEEEEEe
Confidence 477899999 9999874 2333332221 355555544322 22222344555554
|
|
| >KOG4640|consensus | Back alignment and domain information |
|---|
Probab=93.56 E-value=0.3 Score=42.80 Aligned_cols=71 Identities=25% Similarity=0.258 Sum_probs=60.6
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccce-eee------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLA-ALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~-~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
-|.++..+-.+|--..+|..-. +|.|-+..++ -+.+.++.-|..+++ +++ +||.|-.|| |+|-|+++|.
T Consensus 19 l~~~i~~~ewnP~~dLiA~~t~--~gelli~R~n-~qRlwtip~p~~~v~~sL~W~~DGkllaVg~kdG~I~L~Dve~~~ 95 (665)
T KOG4640|consen 19 LPINIKRIEWNPKMDLIATRTE--KGELLIHRLN-WQRLWTIPIPGENVTASLCWRPDGKLLAVGFKDGTIRLHDVEKGG 95 (665)
T ss_pred cccceEEEEEcCccchhheecc--CCcEEEEEec-cceeEeccCCCCccceeeeecCCCCEEEEEecCCeEEEEEccCCC
Confidence 3667888888998888888665 8999999998 577789998888888 888 999999999 9999999886
Q ss_pred ce
Q psy505 85 TL 86 (161)
Q Consensus 85 ~~ 86 (161)
.+
T Consensus 96 ~l 97 (665)
T KOG4640|consen 96 RL 97 (665)
T ss_pred ce
Confidence 54
|
|
| >PF04762 IKI3: IKI3 family; InterPro: IPR006849 Members of this family are components of the elongator multi-subunit component of a novel RNA polymerase II holoenzyme for transcriptional elongation [] | Back alignment and domain information |
|---|
Probab=92.90 E-value=6.5 Score=36.69 Aligned_cols=127 Identities=18% Similarity=0.172 Sum_probs=73.6
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCc-cceeeeeEEEecCCceEEEEeCCcCceee
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDS-PLAALASLSVGTKSGYRLFSLNSIDTLEQ 88 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~-~V~~l~~lasgs~dgiriwd~~~~~~~~~ 88 (161)
+....|..+++|+|+..||.--. ..|++|-..+.. ..+.+.-... .+. .--||.+....+.
T Consensus 302 ~~~~~v~~l~Wn~ds~iLAv~~~---~~vqLWt~~NYHWYLKqei~~~~~~~~~------------~~~Wdpe~p~~L~- 365 (928)
T PF04762_consen 302 PEEEKVIELAWNSDSEILAVWLE---DRVQLWTRSNYHWYLKQEIRFSSSESVN------------FVKWDPEKPLRLH- 365 (928)
T ss_pred CCCceeeEEEECCCCCEEEEEec---CCceEEEeeCCEEEEEEEEEccCCCCCC------------ceEECCCCCCEEE-
Confidence 34456899999999999998543 349999987763 3344432111 111 2345554322221
Q ss_pred EEeecCcceEEEEEee----c----C--CeEEEEecCCCCeEEEEecCCCC-----eEEEEEecCceEEEEECCcE--EE
Q psy505 89 IYENSQEDVCIVERLF----S----S--SLVAVVSLSSPRKLTVCHFKRGS-----EICNYSFSNTILAVKLNRKK--EE 151 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~f----s----~--~~~~~~s~~~d~~i~iWD~~~~~-----~i~~l~~~~~V~~v~~~~~~--~v 151 (161)
+... .+......+.| + | .+.+.|-. .+++++-.++.+. +..++.++++|.+|+|+++. ++
T Consensus 366 v~t~-~g~~~~~~~~~~v~~s~~~~~~D~g~vaVID--G~~lllTpf~~a~VPPPMs~~~l~~~~~v~~vaf~~~~~~~a 442 (928)
T PF04762_consen 366 VLTS-NGQYEIYDFAWDVSRSPGSSPNDNGTVAVID--GNKLLLTPFRRAVVPPPMSSYELELPSPVNDVAFSPSNSRFA 442 (928)
T ss_pred EEec-CCcEEEEEEEEEEEecCCCCccCceEEEEEe--CCeEEEecccccCCCchHhceEEcCCCCcEEEEEeCCCCeEE
Confidence 1111 11222222222 2 1 23333332 3479999998874 23556678999999998875 88
Q ss_pred EEeccc
Q psy505 152 EEDEEE 157 (161)
Q Consensus 152 v~~~~~ 157 (161)
+++.+.
T Consensus 443 vl~~d~ 448 (928)
T PF04762_consen 443 VLTSDG 448 (928)
T ss_pred EEECCC
Confidence 887775
|
|
| >KOG2114|consensus | Back alignment and domain information |
|---|
Probab=92.80 E-value=7.7 Score=35.59 Aligned_cols=112 Identities=20% Similarity=0.213 Sum_probs=65.9
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEc---CCC-CceeeeeccCccceeee-------eEEEecCCceEEEEe
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDA---DNL-HAKTMIPAHDSPLAALA-------SLSVGTKSGYRLFSL 80 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~---~~~-~~~~~l~~H~~~V~~l~-------~lasgs~dgiriwd~ 80 (161)
.||..++.++.+.+=+.+|+ |.. +|.|-.+.- +.+ .......--..||++++ .+.+++...|.+|.+
T Consensus 123 ~~~~p~s~l~Vs~~l~~Iv~-Gf~-nG~V~~~~GDi~RDrgsr~~~~~~~~~pITgL~~~~d~~s~lFv~Tt~~V~~y~l 200 (933)
T KOG2114|consen 123 TNPSPASSLAVSEDLKTIVC-GFT-NGLVICYKGDILRDRGSRQDYSHRGKEPITGLALRSDGKSVLFVATTEQVMLYSL 200 (933)
T ss_pred CCCCcceEEEEEccccEEEE-Eec-CcEEEEEcCcchhccccceeeeccCCCCceeeEEecCCceeEEEEecceeEEEEe
Confidence 35556777777777667776 553 899888742 221 12222233467999998 234455566999999
Q ss_pred CCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCC
Q psy505 81 NSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~ 129 (161)
....+..+....|+ ....+-.|++ ....+++++ +.|.+||.....
T Consensus 201 ~gr~p~~~~ld~~G--~~lnCss~~~~t~qfIca~~--e~l~fY~sd~~~ 246 (933)
T KOG2114|consen 201 SGRTPSLKVLDNNG--ISLNCSSFSDGTYQFICAGS--EFLYFYDSDGRG 246 (933)
T ss_pred cCCCcceeeeccCC--ccceeeecCCCCccEEEecC--ceEEEEcCCCcc
Confidence 74332333444443 4455666764 332444443 489999987544
|
|
| >PF14655 RAB3GAP2_N: Rab3 GTPase-activating protein regulatory subunit N-terminus | Back alignment and domain information |
|---|
Probab=92.67 E-value=1.3 Score=37.36 Aligned_cols=70 Identities=16% Similarity=0.167 Sum_probs=48.3
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccC-----------ccce--------------eeeeEEE
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD-----------SPLA--------------ALASLSV 69 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~-----------~~V~--------------~l~~las 69 (161)
.-+..++.+|++.+.|.+-+ =|.|-|+|+.++..++.++|=. ..-. ++.+++-
T Consensus 308 R~~~~i~~sP~~~laA~tDs--lGRV~LiD~~~~~vvrmWKGYRdAqc~wi~~~~~~~~~~~~~~~~~~~~~~~l~LvIy 385 (415)
T PF14655_consen 308 REGESICLSPSGRLAAVTDS--LGRVLLIDVARGIVVRMWKGYRDAQCGWIEVPEEGDRDRSNSNSPKSSSRFALFLVIY 385 (415)
T ss_pred ceEEEEEECCCCCEEEEEcC--CCcEEEEECCCChhhhhhccCccceEEEEEeecccccccccccccCCCCcceEEEEEE
Confidence 34667888999988888654 6999999999986665543211 1111 2225567
Q ss_pred ecCCc-eEEEEeCCcCce
Q psy505 70 GTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~ 86 (161)
+-..| +.||++++|..+
T Consensus 386 aprRg~lEvW~~~~g~Rv 403 (415)
T PF14655_consen 386 APRRGILEVWSMRQGPRV 403 (415)
T ss_pred eccCCeEEEEecCCCCEE
Confidence 77788 999999888654
|
|
| >COG5354 Uncharacterized protein, contains Trp-Asp (WD) repeat [General function prediction only] | Back alignment and domain information |
|---|
Probab=92.51 E-value=4.3 Score=35.05 Aligned_cols=128 Identities=13% Similarity=0.112 Sum_probs=77.7
Q ss_pred eEEeecCCCceEEEEcCCC-------------CcceEEEEEcCCCCceeeeeccCcc--ceeee-------eEEEecCCc
Q psy505 17 ICCLCVNSDNCYLAYPGSN-------------SIGEVQIFDADNLHAKTMIPAHDSP--LAALA-------SLSVGTKSG 74 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~-------------~dg~v~iWd~~~~~~~~~l~~H~~~--V~~l~-------~lasgs~dg 74 (161)
|.-+.|+|++.||.+=... .+..+.+||..+|..+..+.+-..+ .+-+. ++|=-..+.
T Consensus 74 V~~~~fSP~~kYL~tw~~~pi~~pe~e~sp~~~~n~~~vwd~~sg~iv~sf~~~~q~~~~Wp~~k~s~~D~y~ARvv~~s 153 (561)
T COG5354 74 VKYLDFSPNEKYLVTWSREPIIEPEIEISPFTSKNNVFVWDIASGMIVFSFNGISQPYLGWPVLKFSIDDKYVARVVGSS 153 (561)
T ss_pred ceecccCcccceeeeeccCCccChhhccCCccccCceeEEeccCceeEeeccccCCcccccceeeeeecchhhhhhccCe
Confidence 6778889999999873310 1235999999999999888877766 44222 333222333
Q ss_pred eEEEEeCCcCceeeEEeecC-cceEEEEEeecCC-----eEEEEe--cCCCCeEEEEecCCCCeEEEEEe-c-CceEEEE
Q psy505 75 YRLFSLNSIDTLEQIYENSQ-EDVCIVERLFSSS-----LVAVVS--LSSPRKLTVCHFKRGSEICNYSF-S-NTILAVK 144 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~-~~~~v~~~~fs~~-----~~~~~s--~~~d~~i~iWD~~~~~~i~~l~~-~-~~V~~v~ 144 (161)
+.|+++ ++. +. ...-+. ....+..++++|- .-+..- ...+.+++||.+-.++.+.+-.+ . +.+ .+.
T Consensus 154 l~i~e~-t~n-~~-~~p~~~lr~~gi~dFsisP~~n~~~la~~tPEk~~kpa~~~i~sIp~~s~l~tk~lfk~~~~-qLk 229 (561)
T COG5354 154 LYIHEI-TDN-IE-EHPFKNLRPVGILDFSISPEGNHDELAYWTPEKLNKPAMVRILSIPKNSVLVTKNLFKVSGV-QLK 229 (561)
T ss_pred EEEEec-CCc-cc-cCchhhccccceeeEEecCCCCCceEEEEccccCCCCcEEEEEEccCCCeeeeeeeEeeccc-EEE
Confidence 888886 433 21 111111 1345778888885 222221 24677899999988887765443 2 233 366
Q ss_pred ECCc
Q psy505 145 LNRK 148 (161)
Q Consensus 145 ~~~~ 148 (161)
|++.
T Consensus 230 W~~~ 233 (561)
T COG5354 230 WQVL 233 (561)
T ss_pred EecC
Confidence 6654
|
|
| >KOG1008|consensus | Back alignment and domain information |
|---|
Probab=92.26 E-value=0.016 Score=50.70 Aligned_cols=128 Identities=14% Similarity=0.121 Sum_probs=72.9
Q ss_pred ceeEEeecCC-CceEEEEcC--CCCcceEEEEEcCCC--Cc--eeeeec-cCccceeee------eEEEecCCc-eEEEE
Q psy505 15 NGICCLCVNS-DNCYLAYPG--SNSIGEVQIFDADNL--HA--KTMIPA-HDSPLAALA------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 15 ~~v~~~~~~~-d~~~la~~g--~~~dg~v~iWd~~~~--~~--~~~l~~-H~~~V~~l~------~lasgs~dg-iriwd 79 (161)
.-..++|+++ |..+||++- ..+|-.+.|||..++ -+ -..|.+ -....++++ ++.+|.... ++++|
T Consensus 103 r~Ct~lAwneLDtn~LAagldkhrnds~~~Iwdi~s~ltvPke~~~fs~~~l~gqns~cwlrd~klvlaGm~sr~~~ifd 182 (783)
T KOG1008|consen 103 RPCTSLAWNELDTNHLAAGLDKHRNDSSLKIWDINSLLTVPKESPLFSSSTLDGQNSVCWLRDTKLVLAGMTSRSVHIFD 182 (783)
T ss_pred ccccccccccccHHHHHhhhhhhcccCCccceecccccCCCccccccccccccCccccccccCcchhhcccccchhhhhh
Confidence 3456778877 666777642 113678999999988 22 223333 334455666 777888776 99999
Q ss_pred eCCcCceeeEEe--ecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC--CeEEEEEe-----cCceEEEEECCc
Q psy505 80 LNSIDTLEQIYE--NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG--SEICNYSF-----SNTILAVKLNRK 148 (161)
Q Consensus 80 ~~~~~~~~~~~~--~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~--~~i~~l~~-----~~~V~~v~~~~~ 148 (161)
++-...-...+. .+. ++.|- -|+|++++-- .|+.|-+||...+ +.+..+.+ +.++..+++.|.
T Consensus 183 lRqs~~~~~svnTk~vq-G~tVd--p~~~nY~cs~---~dg~iAiwD~~rnienpl~~i~~~~N~~~~~l~~~aycPt 254 (783)
T KOG1008|consen 183 LRQSLDSVSSVNTKYVQ-GITVD--PFSPNYFCSN---SDGDIAIWDTYRNIENPLQIILRNENKKPKQLFALAYCPT 254 (783)
T ss_pred hhhhhhhhhhhhhhhcc-cceec--CCCCCceecc---ccCceeeccchhhhccHHHHHhhCCCCcccceeeEEeccC
Confidence 973211001111 122 12222 2677775433 3678999994322 22222222 245999999886
|
|
| >KOG4649|consensus | Back alignment and domain information |
|---|
Probab=92.15 E-value=5.1 Score=32.09 Aligned_cols=106 Identities=14% Similarity=0.051 Sum_probs=69.7
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceee---e--eEEEecCCc-eEEEEeCCcCceeeEEeecCcceE
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAAL---A--SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVC 98 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l---~--~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~ 98 (161)
|.+.+++-|+. .|.+.--|..+|+....-.- ...+.+- . +++.|...| +.+-+..+|+...++.... .+.
T Consensus 21 dskT~v~igSH-s~~~~avd~~sG~~~We~il-g~RiE~sa~vvgdfVV~GCy~g~lYfl~~~tGs~~w~f~~~~--~vk 96 (354)
T KOG4649|consen 21 DSKTLVVIGSH-SGIVIAVDPQSGNLIWEAIL-GVRIECSAIVVGDFVVLGCYSGGLYFLCVKTGSQIWNFVILE--TVK 96 (354)
T ss_pred CCceEEEEecC-CceEEEecCCCCcEEeehhh-CceeeeeeEEECCEEEEEEccCcEEEEEecchhheeeeeehh--hhc
Confidence 55555555665 78898899999987644210 1222222 2 788888888 9999999997664332222 333
Q ss_pred E-EEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe
Q psy505 99 I-VERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 99 v-~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~ 136 (161)
+ ..++|+...++.. +.|+....-|.++..|+-..+.
T Consensus 97 ~~a~~d~~~glIycg--shd~~~yalD~~~~~cVykskc 133 (354)
T KOG4649|consen 97 VRAQCDFDGGLIYCG--SHDGNFYALDPKTYGCVYKSKC 133 (354)
T ss_pred cceEEcCCCceEEEe--cCCCcEEEecccccceEEeccc
Confidence 3 2466776666554 4688999999999998876643
|
|
| >PF03178 CPSF_A: CPSF A subunit region; InterPro: IPR004871 This family includes a region that lies towards the C terminus of the cleavage and polyadenylation specificity factor (CPSF) A (160 kDa) subunit | Back alignment and domain information |
|---|
Probab=92.00 E-value=5.4 Score=31.93 Aligned_cols=76 Identities=14% Similarity=0.122 Sum_probs=45.3
Q ss_pred c-eEEEEeCCc----CceeeEEeec-CcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC-eEEEEEe--cCceEEEE
Q psy505 74 G-YRLFSLNSI----DTLEQIYENS-QEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS-EICNYSF--SNTILAVK 144 (161)
Q Consensus 74 g-iriwd~~~~----~~~~~~~~~~-~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~-~i~~l~~--~~~V~~v~ 144 (161)
| +.++++.+. ..+....+.. .++ |.++..-.+.+ +++. .+.|.+|++...+ .+..-.+ +..|.++.
T Consensus 62 Gri~v~~i~~~~~~~~~l~~i~~~~~~g~--V~ai~~~~~~l-v~~~--g~~l~v~~l~~~~~l~~~~~~~~~~~i~sl~ 136 (321)
T PF03178_consen 62 GRILVFEISESPENNFKLKLIHSTEVKGP--VTAICSFNGRL-VVAV--GNKLYVYDLDNSKTLLKKAFYDSPFYITSLS 136 (321)
T ss_dssp EEEEEEEECSS-----EEEEEEEEEESS---EEEEEEETTEE-EEEE--TTEEEEEEEETTSSEEEEEEE-BSSSEEEEE
T ss_pred cEEEEEEEEcccccceEEEEEEEEeecCc--ceEhhhhCCEE-EEee--cCEEEEEEccCcccchhhheecceEEEEEEe
Confidence 8 999999873 2343332221 233 44444444443 3433 2589999999988 5544333 45788888
Q ss_pred ECCcEEEEEe
Q psy505 145 LNRKKEEEED 154 (161)
Q Consensus 145 ~~~~~~vv~~ 154 (161)
..++.+++..
T Consensus 137 ~~~~~I~vgD 146 (321)
T PF03178_consen 137 VFKNYILVGD 146 (321)
T ss_dssp EETTEEEEEE
T ss_pred ccccEEEEEE
Confidence 8778776654
|
CPSF is involved in mRNA polyadenylation and binds the AAUAAA conserved sequence in pre-mRNA. CPSF has also been found to be necessary for splicing of single-intron pre-mRNAs []. The function of the aligned region is unknown but may be involved in RNA/DNA binding.; GO: 0003676 nucleic acid binding, 0005634 nucleus; PDB: 2B5M_A 4A0K_C 4A0B_C 3I7L_A 3I8E_A 4A09_A 4A0A_A 3EI4_C 2B5L_A 3I7O_A .... |
| >PRK11138 outer membrane biogenesis protein BamB; Provisional | Back alignment and domain information |
|---|
Probab=91.88 E-value=3.8 Score=33.79 Aligned_cols=94 Identities=16% Similarity=0.149 Sum_probs=55.5
Q ss_pred cceEEEEEcCCCCceeeeeccC--c--------cce-ee--e--eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHD--S--------PLA-AL--A--SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIV 100 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~--~--------~V~-~l--~--~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~ 100 (161)
+|.+.-+|..+|+.+...+-.. . .+. ++ . .+..++.+| +.-+|.++|+.+-+. .... ... .
T Consensus 78 ~g~l~ald~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~v~~~~v~v~~~~g~l~ald~~tG~~~W~~-~~~~-~~~-s 154 (394)
T PRK11138 78 AGLVKALDADTGKEIWSVDLSEKDGWFSKNKSALLSGGVTVAGGKVYIGSEKGQVYALNAEDGEVAWQT-KVAG-EAL-S 154 (394)
T ss_pred CCeEEEEECCCCcEeeEEcCCCcccccccccccccccccEEECCEEEEEcCCCEEEEEECCCCCCcccc-cCCC-cee-c
Confidence 7899999999999877654321 0 111 11 1 566677888 999999999854222 1111 110 0
Q ss_pred EEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 101 ERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 101 ~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
+.... ++..++.. .++.|.-+|.++|+.+=++.
T Consensus 155 sP~v~-~~~v~v~~-~~g~l~ald~~tG~~~W~~~ 187 (394)
T PRK11138 155 RPVVS-DGLVLVHT-SNGMLQALNESDGAVKWTVN 187 (394)
T ss_pred CCEEE-CCEEEEEC-CCCEEEEEEccCCCEeeeec
Confidence 11112 33444433 46789999999998775543
|
|
| >PF07433 DUF1513: Protein of unknown function (DUF1513); InterPro: IPR008311 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function | Back alignment and domain information |
|---|
Probab=91.55 E-value=2.3 Score=34.46 Aligned_cols=87 Identities=9% Similarity=0.056 Sum_probs=52.7
Q ss_pred eEEEecCCc--eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEec-----CCCCeEEEEecC-CCCeEEEEE-e
Q psy505 66 SLSVGTKSG--YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL-----SSPRKLTVCHFK-RGSEICNYS-F 136 (161)
Q Consensus 66 ~lasgs~dg--iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~-----~~d~~i~iWD~~-~~~~i~~l~-~ 136 (161)
.++.+-.-| .-+||.++|+....+..... .-.----.||+++..+.+. ...+.|-|||++ +-+.+.++. +
T Consensus 19 avafaRRPG~~~~v~D~~~g~~~~~~~a~~g-RHFyGHg~fs~dG~~LytTEnd~~~g~G~IgVyd~~~~~~ri~E~~s~ 97 (305)
T PF07433_consen 19 AVAFARRPGTFALVFDCRTGQLLQRLWAPPG-RHFYGHGVFSPDGRLLYTTENDYETGRGVIGVYDAARGYRRIGEFPSH 97 (305)
T ss_pred EEEEEeCCCcEEEEEEcCCCceeeEEcCCCC-CEEecCEEEcCCCCEEEEeccccCCCcEEEEEEECcCCcEEEeEecCC
Confidence 355666666 78899988875533322111 0001112589988877653 345689999999 445566665 3
Q ss_pred cCceEEEEECCcE--EEEE
Q psy505 137 SNTILAVKLNRKK--EEEE 153 (161)
Q Consensus 137 ~~~V~~v~~~~~~--~vv~ 153 (161)
.-.-..+.+.||+ |+|+
T Consensus 98 GIGPHel~l~pDG~tLvVA 116 (305)
T PF07433_consen 98 GIGPHELLLMPDGETLVVA 116 (305)
T ss_pred CcChhhEEEcCCCCEEEEE
Confidence 3345567788886 5554
|
|
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=91.45 E-value=0.31 Score=44.45 Aligned_cols=77 Identities=5% Similarity=-0.054 Sum_probs=58.3
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEE-EEecCceEEEEECCcEEEEE
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICN-YSFSNTILAVKLNRKKEEEE 153 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~-l~~~~~V~~v~~~~~~~vv~ 153 (161)
+-|| .++|+|-... +.++.+.+++|+|.-+.+++|-+-+.+.+|...+.+.-.. ..|+.+|..++||+++-+++
T Consensus 43 VtIf-adtGEPqr~V----t~P~hatSLCWHpe~~vLa~gwe~g~~~v~~~~~~e~htv~~th~a~i~~l~wS~~G~~l~ 117 (1416)
T KOG3617|consen 43 VTIF-ADTGEPQRDV----TYPVHATSLCWHPEEFVLAQGWEMGVSDVQKTNTTETHTVVETHPAPIQGLDWSHDGTVLM 117 (1416)
T ss_pred EEEE-ecCCCCCccc----ccceehhhhccChHHHHHhhccccceeEEEecCCceeeeeccCCCCCceeEEecCCCCeEE
Confidence 8888 4567754322 2356677899999999999887777899999887765332 34788999999999988877
Q ss_pred ecc
Q psy505 154 DEE 156 (161)
Q Consensus 154 ~~~ 156 (161)
+.+
T Consensus 118 t~d 120 (1416)
T KOG3617|consen 118 TLD 120 (1416)
T ss_pred EcC
Confidence 765
|
|
| >PF04053 Coatomer_WDAD: Coatomer WD associated region ; InterPro: IPR006692 Proteins synthesised on the ribosome and processed in the endoplasmic reticulum are transported from the Golgi apparatus to the trans-Golgi network (TGN), and from there via small carrier vesicles to their final destination compartment | Back alignment and domain information |
|---|
Probab=91.29 E-value=5.2 Score=34.12 Aligned_cols=85 Identities=12% Similarity=0.076 Sum_probs=44.7
Q ss_pred eEEEecCCceEEEEeCCcCceeeEEeecCcceEEEEEeecCC--eEEEEecCCCCeEEEEecCCC-----------CeEE
Q psy505 66 SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTVCHFKRG-----------SEIC 132 (161)
Q Consensus 66 ~lasgs~dgiriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~--~~~~~s~~~d~~i~iWD~~~~-----------~~i~ 132 (161)
+|...+++.|.+||.++++.+.++ .-. .|..+.|+++ ..++++ +.++.|++.... ...+
T Consensus 119 LL~~~~~~~i~~yDw~~~~~i~~i---~v~--~vk~V~Ws~~g~~val~t---~~~i~il~~~~~~~~~~~~~g~e~~f~ 190 (443)
T PF04053_consen 119 LLGVKSSDFICFYDWETGKLIRRI---DVS--AVKYVIWSDDGELVALVT---KDSIYILKYNLEAVAAIPEEGVEDAFE 190 (443)
T ss_dssp SEEEEETTEEEEE-TTT--EEEEE---SS---E-EEEEE-TTSSEEEEE----S-SEEEEEE-HHHHHHBTTTB-GGGEE
T ss_pred EEEEECCCCEEEEEhhHcceeeEE---ecC--CCcEEEEECCCCEEEEEe---CCeEEEEEecchhcccccccCchhceE
Confidence 666666667999999988654333 222 2667789976 455554 346888876544 1233
Q ss_pred EEE-ecCceEEEEECCcEEEEEeccce
Q psy505 133 NYS-FSNTILAVKLNRKKEEEEDEEEE 158 (161)
Q Consensus 133 ~l~-~~~~V~~v~~~~~~~vv~~~~~~ 158 (161)
.+. ....|.+..|.-+-++-.+.+++
T Consensus 191 ~~~E~~~~IkSg~W~~d~fiYtT~~~l 217 (443)
T PF04053_consen 191 LIHEISERIKSGCWVEDCFIYTTSNHL 217 (443)
T ss_dssp EEEEE-S--SEEEEETTEEEEE-TTEE
T ss_pred EEEEecceeEEEEEEcCEEEEEcCCeE
Confidence 333 36788888887775555555544
|
This traffic is bidirectional, to ensure that proteins required to form vesicles are recycled. Vesicles have specific coat proteins (such as clathrin or coatomer) that are important for cargo selection and direction of transfer []. While clathrin mediates endocytic protein transport, and transport from ER to Golgi, coatomers primarily mediate intra-Golgi transport, as well as the reverse Golgi to ER transport of dilysine-tagged proteins []. For example, the coatomer COP1 (coat protein complex 1) is responsible for reverse transport of recycled proteins from Golgi and pre-Golgi compartments back to the ER, while COPII buds vesicles from the ER to the Golgi []. Coatomers reversibly associate with Golgi (non-clathrin-coated) vesicles to mediate protein transport and for budding from Golgi membranes []. Activated small guanine triphosphatases (GTPases) attract coat proteins to specific membrane export sites, thereby linking coatomers to export cargos. As coat proteins polymerise, vesicles are formed and budded from membrane-bound organelles. Coatomer complexes also influence Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors. In mammals, coatomer complexes can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins. Coatomer complexes are hetero-oligomers composed of at least an alpha, beta, beta', gamma, delta, epsilon and zeta subunits. This entry represents the WD-associated region found in coatomer subunits alpha, beta and beta' subunits. The alpha-subunit (RET1P) of the coatomer complex in Saccharomyces cerevisiae (Baker's yeast), participates in membrane transport between the endoplasmic reticulum and Golgi apparatus. The protein contains six WD-40 repeat motifs in its N-terminal region []. More information about these proteins can be found at Protein of the Month: Clathrin [].; GO: 0005198 structural molecule activity, 0006886 intracellular protein transport, 0016192 vesicle-mediated transport, 0030117 membrane coat; PDB: 3MKQ_B. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=91.26 E-value=2.3 Score=36.01 Aligned_cols=109 Identities=15% Similarity=0.232 Sum_probs=57.5
Q ss_pred EeecCCCceEEEEcCCCCcce--EEEEEcCCCCceeeee---ccCccceeee----eEE-EecCCc---eEEEEeCCcCc
Q psy505 19 CLCVNSDNCYLAYPGSNSIGE--VQIFDADNLHAKTMIP---AHDSPLAALA----SLS-VGTKSG---YRLFSLNSIDT 85 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~--v~iWd~~~~~~~~~l~---~H~~~V~~l~----~la-sgs~dg---iriwd~~~~~~ 85 (161)
.-+|+|||+.+|.+... ||. |.+.|+.++.... |. +... -.+.+ .++ +.+..| |-++|.+.+..
T Consensus 242 ~P~fspDG~~l~f~~~r-dg~~~iy~~dl~~~~~~~-Lt~~~gi~~-~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~ 318 (425)
T COG0823 242 APAFSPDGSKLAFSSSR-DGSPDIYLMDLDGKNLPR-LTNGFGINT-SPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV 318 (425)
T ss_pred CccCCCCCCEEEEEECC-CCCccEEEEcCCCCccee-cccCCcccc-CccCCCCCCEEEEEeCCCCCcceEEECCCCCce
Confidence 34568899999998886 886 5566888766332 32 2211 11222 443 333444 66777766543
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCC-C--CeEEEEecCCCCeEEEE
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSS-P--RKLTVCHFKRGSEICNY 134 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~-d--~~i~iWD~~~~~~i~~l 134 (161)
-.-++.+-.. . .-.+||++..++..+. + -.|.+.|..++..+..+
T Consensus 319 ~riT~~~~~~--~--~p~~SpdG~~i~~~~~~~g~~~i~~~~~~~~~~~~~l 366 (425)
T COG0823 319 TRLTFSGGGN--S--NPVWSPDGDKIVFESSSGGQWDIDKNDLASGGKIRIL 366 (425)
T ss_pred eEeeccCCCC--c--CccCCCCCCEEEEEeccCCceeeEEeccCCCCcEEEc
Confidence 2112222111 1 3346777766554321 2 23777777666533333
|
|
| >KOG1832|consensus | Back alignment and domain information |
|---|
Probab=90.85 E-value=0.23 Score=45.56 Aligned_cols=48 Identities=19% Similarity=0.297 Sum_probs=38.2
Q ss_pred CceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcce
Q psy505 49 HAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDV 97 (161)
Q Consensus 49 ~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~ 97 (161)
+...+|..|+..-+|++ .|+.|+-.| |++|++.+|.+. ....+|..++
T Consensus 1092 r~w~~frd~~~~fTc~afs~~~~hL~vG~~~Geik~~nv~sG~~e-~s~ncH~Sav 1146 (1516)
T KOG1832|consen 1092 RSWRSFRDETALFTCIAFSGGTNHLAVGSHAGEIKIFNVSSGSME-ESVNCHQSAV 1146 (1516)
T ss_pred ccchhhhccccceeeEEeecCCceEEeeeccceEEEEEccCcccc-cccccccccc
Confidence 56677888888888888 899999999 999999999866 4556665443
|
|
| >COG2706 3-carboxymuconate cyclase [Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=90.09 E-value=9.5 Score=31.40 Aligned_cols=130 Identities=12% Similarity=0.078 Sum_probs=68.1
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC-CceeeeeccC-------ccce--eee-----eEEEecCCc---eE
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-HAKTMIPAHD-------SPLA--ALA-----SLSVGTKSG---YR 76 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-~~~~~l~~H~-------~~V~--~l~-----~lasgs~dg---ir 76 (161)
.|-+-++|+|++++.=.-..- +++|-+|..... ..+..++-+. +.-+ ++. .+.-+|+.| |-
T Consensus 191 ~GPRHi~FHpn~k~aY~v~EL-~stV~v~~y~~~~g~~~~lQ~i~tlP~dF~g~~~~aaIhis~dGrFLYasNRg~dsI~ 269 (346)
T COG2706 191 AGPRHIVFHPNGKYAYLVNEL-NSTVDVLEYNPAVGKFEELQTIDTLPEDFTGTNWAAAIHISPDGRFLYASNRGHDSIA 269 (346)
T ss_pred CCcceEEEcCCCcEEEEEecc-CCEEEEEEEcCCCceEEEeeeeccCccccCCCCceeEEEECCCCCEEEEecCCCCeEE
Confidence 467789999999766444553 899999998873 2223333221 2222 222 555677766 88
Q ss_pred EEEeCCc-CceeeEEeecC-cceEEEEEeecCCeEEEE-ecCCCCeEEEE--ecCCCCeEEEEE--ecCceEEEEEC
Q psy505 77 LFSLNSI-DTLEQIYENSQ-EDVCIVERLFSSSLVAVV-SLSSPRKLTVC--HFKRGSEICNYS--FSNTILAVKLN 146 (161)
Q Consensus 77 iwd~~~~-~~~~~~~~~~~-~~~~v~~~~fs~~~~~~~-s~~~d~~i~iW--D~~~~~~i~~l~--~~~~V~~v~~~ 146 (161)
+|.+... ..+ .+..... +...=..+.|+|.+..++ .+-....|.++ |-++|++-.... .-....+|+|.
T Consensus 270 ~f~V~~~~g~L-~~~~~~~teg~~PR~F~i~~~g~~Liaa~q~sd~i~vf~~d~~TG~L~~~~~~~~~p~Pvcv~f~ 345 (346)
T COG2706 270 VFSVDPDGGKL-ELVGITPTEGQFPRDFNINPSGRFLIAANQKSDNITVFERDKETGRLTLLGRYAVVPEPVCVKFL 345 (346)
T ss_pred EEEEcCCCCEE-EEEEEeccCCcCCccceeCCCCCEEEEEccCCCcEEEEEEcCCCceEEecccccCCCCcEEEEEc
Confidence 8887542 223 2322111 111124566766443333 33222348888 555666432222 22333446664
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=89.26 E-value=3.8 Score=35.44 Aligned_cols=27 Identities=11% Similarity=0.284 Sum_probs=20.4
Q ss_pred CCeEEEEecCCCCeEEEEecCCCCeEEEE
Q psy505 106 SSLVAVVSLSSPRKLTVCHFKRGSEICNY 134 (161)
Q Consensus 106 ~~~~~~~s~~~d~~i~iWD~~~~~~i~~l 134 (161)
.+.+..++ .|++||+||+++++++.+.
T Consensus 230 ~~~l~tl~--~D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 230 DTFLFTLS--RDHTLRIWSLETGQCLATI 256 (547)
T ss_dssp TTEEEEEE--TTSEEEEEETTTTCEEEEE
T ss_pred CCEEEEEe--CCCeEEEEECCCCeEEEEe
Confidence 34444444 6899999999999997665
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=88.96 E-value=1.6 Score=24.83 Aligned_cols=29 Identities=24% Similarity=0.433 Sum_probs=21.3
Q ss_pred eEEeecCCCc---eEEEEcCCCCcceEEEEEcCC
Q psy505 17 ICCLCVNSDN---CYLAYPGSNSIGEVQIFDADN 47 (161)
Q Consensus 17 v~~~~~~~d~---~~la~~g~~~dg~v~iWd~~~ 47 (161)
+.++.|+|++ .+||.+-. -|.|.|+|+++
T Consensus 3 vR~~kFsP~~~~~DLL~~~E~--~g~vhi~D~R~ 34 (43)
T PF10313_consen 3 VRCCKFSPEPGGNDLLAWAEH--QGRVHIVDTRS 34 (43)
T ss_pred eEEEEeCCCCCcccEEEEEcc--CCeEEEEEccc
Confidence 5566666643 48888665 69999999995
|
It contains a characteristic DLL sequence motif. |
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=88.90 E-value=1.4 Score=23.81 Aligned_cols=32 Identities=22% Similarity=0.269 Sum_probs=22.2
Q ss_pred CCceEEEEcCCCCcceEEEEEcCCCCceeeeec
Q psy505 24 SDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA 56 (161)
Q Consensus 24 ~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~ 56 (161)
||+..+..+... +++|.++|+.+++.+..+.-
T Consensus 1 pd~~~lyv~~~~-~~~v~~id~~~~~~~~~i~v 32 (42)
T TIGR02276 1 PDGTKLYVTNSG-SNTVSVIDTATNKVIATIPV 32 (42)
T ss_pred CCCCEEEEEeCC-CCEEEEEECCCCeEEEEEEC
Confidence 456655555553 78899999888877777664
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >KOG3617|consensus | Back alignment and domain information |
|---|
Probab=88.21 E-value=2.2 Score=39.29 Aligned_cols=107 Identities=17% Similarity=0.274 Sum_probs=70.3
Q ss_pred CCceeEEe-ecCCCceEEEEcCCC--CcceEEEEEcCCCCceeee--eccCccceeee------eEEEecCCc-eEEEEe
Q psy505 13 NPNGICCL-CVNSDNCYLAYPGSN--SIGEVQIFDADNLHAKTMI--PAHDSPLAALA------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 13 ~~~~v~~~-~~~~d~~~la~~g~~--~dg~v~iWd~~~~~~~~~l--~~H~~~V~~l~------~lasgs~dg-iriwd~ 80 (161)
+..++..+ +++|....+|.++.. ..|+|.|+- .+|++-... .-| +++++ .||+|=+-| +-+|..
T Consensus 13 Dsdavsti~SWHPsePlfAVA~fS~er~GSVtIfa-dtGEPqr~Vt~P~h---atSLCWHpe~~vLa~gwe~g~~~v~~~ 88 (1416)
T KOG3617|consen 13 DSDAVSTISSWHPSEPLFAVASFSPERGGSVTIFA-DTGEPQRDVTYPVH---ATSLCWHPEEFVLAQGWEMGVSDVQKT 88 (1416)
T ss_pred cccccccccccCCCCceeEEEEecCCCCceEEEEe-cCCCCCccccccee---hhhhccChHHHHHhhccccceeEEEec
Confidence 33444433 446766666654310 157788874 456653322 223 34566 788888889 999998
Q ss_pred CCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecC
Q psy505 81 NSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK 126 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~ 126 (161)
.+.+ .......| +..+..+.||++|..+.++...+.|.+|...
T Consensus 89 ~~~e-~htv~~th--~a~i~~l~wS~~G~~l~t~d~~g~v~lwr~d 131 (1416)
T KOG3617|consen 89 NTTE-THTVVETH--PAPIQGLDWSHDGTVLMTLDNPGSVHLWRYD 131 (1416)
T ss_pred CCce-eeeeccCC--CCCceeEEecCCCCeEEEcCCCceeEEEEee
Confidence 7644 22333344 4457888999999999999888999999765
|
|
| >PF10647 Gmad1: Lipoprotein LpqB beta-propeller domain; InterPro: IPR018910 The Gmad1 domain is found associated with IPR019606 from INTERPRO, in bacterial spore formation | Back alignment and domain information |
|---|
Probab=87.75 E-value=11 Score=29.30 Aligned_cols=79 Identities=8% Similarity=0.065 Sum_probs=45.4
Q ss_pred CCceEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEE-ecCCCCeEE-EEEec---CceEEEEEC
Q psy505 72 KSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVC-HFKRGSEIC-NYSFS---NTILAVKLN 146 (161)
Q Consensus 72 ~dgiriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iW-D~~~~~~i~-~l~~~---~~V~~v~~~ 146 (161)
+++-+||-.+.+........+. ....-.|++++...+....+...+++ +...++... .+... ..|.+++++
T Consensus 45 ~~~~~L~~~~~~~~~~~~~~g~----~l~~PS~d~~g~~W~v~~~~~~~~~~~~~~~g~~~~~~v~~~~~~~~I~~l~vS 120 (253)
T PF10647_consen 45 DGGRSLYVGPAGGPVRPVLTGG----SLTRPSWDPDGWVWTVDDGSGGVRVVRDSASGTGEPVEVDWPGLRGRITALRVS 120 (253)
T ss_pred CCCCEEEEEcCCCcceeeccCC----ccccccccCCCCEEEEEcCCCceEEEEecCCCcceeEEecccccCCceEEEEEC
Confidence 4445555554444443333333 24455678776655544455566666 344444332 23332 289999999
Q ss_pred Cc--EEEEEe
Q psy505 147 RK--KEEEED 154 (161)
Q Consensus 147 ~~--~~vv~~ 154 (161)
|| +++++.
T Consensus 121 pDG~RvA~v~ 130 (253)
T PF10647_consen 121 PDGTRVAVVV 130 (253)
T ss_pred CCCcEEEEEE
Confidence 98 888887
|
It is predicted to have a beta-propeller fold and to have a passive binding role rather than a catalytic function owing to the low number of conserved hydrophilic residues. |
| >PF08596 Lgl_C: Lethal giant larvae(Lgl) like, C-terminal; InterPro: IPR013905 The Lethal giant larvae (Lgl) tumour suppressor protein is conserved from yeast to mammals | Back alignment and domain information |
|---|
Probab=87.61 E-value=8.1 Score=32.42 Aligned_cols=29 Identities=28% Similarity=0.533 Sum_probs=21.7
Q ss_pred eeccCccceeee-----eEEEecCCc-eEEEEeCC
Q psy505 54 IPAHDSPLAALA-----SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 54 l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~ 82 (161)
++...++|++++ ++|.|.++| +-|.|+|-
T Consensus 82 ~~~~~g~vtal~~S~iGFvaigy~~G~l~viD~RG 116 (395)
T PF08596_consen 82 LDAKQGPVTALKNSDIGFVAIGYESGSLVVIDLRG 116 (395)
T ss_dssp E---S-SEEEEEE-BTSEEEEEETTSEEEEEETTT
T ss_pred eeccCCcEeEEecCCCcEEEEEecCCcEEEEECCC
Confidence 345567888888 999999999 99999954
|
The Lgl protein functions in cell polarity, at least in part, by regulating SNARE-mediated membrane delivery events at the cell surface []. The N-terminal half of Lgl members contains WD40 repeats (see IPR001680 from INTERPRO), while the C-terminal half appears specific to the protein []. ; PDB: 2OAJ_A. |
| >TIGR02276 beta_rpt_yvtn 40-residue YVTN family beta-propeller repeat | Back alignment and domain information |
|---|
Probab=87.55 E-value=3 Score=22.42 Aligned_cols=36 Identities=14% Similarity=0.124 Sum_probs=24.4
Q ss_pred EEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEE
Q psy505 110 AVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKL 145 (161)
Q Consensus 110 ~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~ 145 (161)
..++...+++|.++|..+++.+..+.-...-.++.|
T Consensus 6 lyv~~~~~~~v~~id~~~~~~~~~i~vg~~P~~i~~ 41 (42)
T TIGR02276 6 LYVTNSGSNTVSVIDTATNKVIATIPVGGYPFGVAV 41 (42)
T ss_pred EEEEeCCCCEEEEEECCCCeEEEEEECCCCCceEEe
Confidence 345555677999999999988877765444444444
|
This repeat of about 40 amino acids is found in up to 14 copies per protein. Archaea Methanosarcina mazei and Methanosarcina acetivorans each have over 10 genes that encode tandem copies of this repeat, which is also found in other species. PSIPRED predicts with high confidence that each 40-residue repeats contains four beta strands. This model overlaps somewhat with the NHL repeat (Pfam pfam01436) and also shows sequence similarity to the WD domain, G-beta repeat (Pfam pfam00400). |
| >cd00216 PQQ_DH Dehydrogenases with pyrrolo-quinoline quinone (PQQ) as cofactor, like ethanol, methanol, and membrane bound glucose dehydrogenases | Back alignment and domain information |
|---|
Probab=87.55 E-value=17 Score=31.12 Aligned_cols=104 Identities=11% Similarity=0.083 Sum_probs=59.5
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCc------c-ce---ee---eeEEEecCCc-eEEEEeCCcCceeeEE
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS------P-LA---AL---ASLSVGTKSG-YRLFSLNSIDTLEQIY 90 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~------~-V~---~l---~~lasgs~dg-iriwd~~~~~~~~~~~ 90 (161)
++...+. .. +|.+.-.|..+|+.+..++.... + +. .+ ..+..++.+| +.-+|.++|+.+ +
T Consensus 61 ~g~vy~~-~~--~g~l~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~g~~~~~~~~V~v~~~~g~v~AlD~~TG~~~---W 134 (488)
T cd00216 61 DGDMYFT-TS--HSALFALDAATGKVLWRYDPKLPADRGCCDVVNRGVAYWDPRKVFFGTFDGRLVALDAETGKQV---W 134 (488)
T ss_pred CCEEEEe-CC--CCcEEEEECCCChhhceeCCCCCccccccccccCCcEEccCCeEEEecCCCeEEEEECCCCCEe---e
Confidence 4544443 33 79999999999998877653322 1 11 11 1566677888 999999999854 3
Q ss_pred eecCcce-----EEE-EEeecCCeEEEEec--------CCCCeEEEEecCCCCeEEEEE
Q psy505 91 ENSQEDV-----CIV-ERLFSSSLVAVVSL--------SSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 91 ~~~~~~~-----~v~-~~~fs~~~~~~~s~--------~~d~~i~iWD~~~~~~i~~l~ 135 (161)
+...... .+. +..+.. +.++++. ..++.+.-.|.++|+.+=.+.
T Consensus 135 ~~~~~~~~~~~~~i~ssP~v~~-~~v~vg~~~~~~~~~~~~g~v~alD~~TG~~~W~~~ 192 (488)
T cd00216 135 KFGNNDQVPPGYTMTGAPTIVK-KLVIIGSSGAEFFACGVRGALRAYDVETGKLLWRFY 192 (488)
T ss_pred eecCCCCcCcceEecCCCEEEC-CEEEEeccccccccCCCCcEEEEEECCCCceeeEee
Confidence 2221110 010 111222 3333332 135678888999998775544
|
The alignment model contains an 8-bladed beta-propeller. |
| >PRK02888 nitrous-oxide reductase; Validated | Back alignment and domain information |
|---|
Probab=87.29 E-value=13 Score=33.18 Aligned_cols=38 Identities=11% Similarity=-0.006 Sum_probs=28.2
Q ss_pred CCeEEEEecCC----C-CeEEEEEecCceEEEEECCcEEEEEe
Q psy505 117 PRKLTVCHFKR----G-SEICNYSFSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 117 d~~i~iWD~~~----~-~~i~~l~~~~~V~~v~~~~~~~vv~~ 154 (161)
+++|.+.|.++ + +.+..+.-+....++.++||+-.++.
T Consensus 295 gn~V~VID~~t~~~~~~~v~~yIPVGKsPHGV~vSPDGkylyV 337 (635)
T PRK02888 295 GSKVPVVDGRKAANAGSALTRYVPVPKNPHGVNTSPDGKYFIA 337 (635)
T ss_pred CCEEEEEECCccccCCcceEEEEECCCCccceEECCCCCEEEE
Confidence 56899999998 3 44445556789999999998544443
|
|
| >PF00780 CNH: CNH domain; InterPro: IPR001180 Based on sequence similarities a domain of homology has been identified in the following proteins []: Citron and Citron kinase | Back alignment and domain information |
|---|
Probab=87.07 E-value=12 Score=28.87 Aligned_cols=137 Identities=15% Similarity=0.158 Sum_probs=80.9
Q ss_pred CCceeEEee---cCCCceEEEEcCCCCcceEEEEEcCCC-----CceeeeeccCccceeee----eEEEecCCceEEEEe
Q psy505 13 NPNGICCLC---VNSDNCYLAYPGSNSIGEVQIFDADNL-----HAKTMIPAHDSPLAALA----SLSVGTKSGYRLFSL 80 (161)
Q Consensus 13 ~~~~v~~~~---~~~d~~~la~~g~~~dg~v~iWd~~~~-----~~~~~l~~H~~~V~~l~----~lasgs~dgiriwd~ 80 (161)
...|+..++ ....+..|+.+- ...|.||..... +..+.+.-. +++.+++ .++.|..+++.+.|+
T Consensus 89 ~~~~v~~f~~~~~~~~~~~L~va~---kk~i~i~~~~~~~~~f~~~~ke~~lp-~~~~~i~~~~~~i~v~~~~~f~~idl 164 (275)
T PF00780_consen 89 ETKGVSFFAVNGGHEGSRRLCVAV---KKKILIYEWNDPRNSFSKLLKEISLP-DPPSSIAFLGNKICVGTSKGFYLIDL 164 (275)
T ss_pred ccCCeeEEeeccccccceEEEEEE---CCEEEEEEEECCcccccceeEEEEcC-CCcEEEEEeCCEEEEEeCCceEEEec
Confidence 345677777 233445666543 468998887653 344555543 5566766 888888888999999
Q ss_pred CCcCceeeEEeecCcc----------eEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEE--EEEecCceEEEEECCc
Q psy505 81 NSIDTLEQIYENSQED----------VCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEIC--NYSFSNTILAVKLNRK 148 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~----------~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~--~l~~~~~V~~v~~~~~ 148 (161)
.++... .++...... ..+..+..+.+.+.++ - |+ +-++=-..|+..+ .+.|++...++.+...
T Consensus 165 ~~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Ll~-~--~~-~g~fv~~~G~~~r~~~i~W~~~p~~~~~~~p 239 (275)
T PF00780_consen 165 NTGSPS-ELLDPSDSSSSFKSRNSSSKPLGIFQLSDNEFLLC-Y--DN-IGVFVNKNGEPSRKSTIQWSSAPQSVAYSSP 239 (275)
T ss_pred CCCCce-EEeCccCCcchhhhcccCCCceEEEEeCCceEEEE-e--cc-eEEEEcCCCCcCcccEEEcCCchhEEEEECC
Confidence 987643 444221111 1122222333443333 1 22 3344334565554 5778888888888888
Q ss_pred EEEEEeccce
Q psy505 149 KEEEEDEEEE 158 (161)
Q Consensus 149 ~~vv~~~~~~ 158 (161)
.++++.++.|
T Consensus 240 yli~~~~~~i 249 (275)
T PF00780_consen 240 YLIAFSSNSI 249 (275)
T ss_pred EEEEECCCEE
Confidence 8888887744
|
These two proteins interact with the GTP-bound forms of the small GTPases Rho and Rac but not with Cdc42. Myotonic dystrophy kinase-related Cdc42-binding kinase (MRCKalpha). This serine/threonine kinase interacts with the GTP-bound form of the small GTPase Cdc42 and to a lesser extent with that of Rac. NCK Interacting Kinase (NIK), a serine/threonine protein kinase. ROM-1 and ROM-2, from yeast. These proteins are GDP/GTP exchange proteins (GEPs) for the small GTP binding protein Rho1. This domain, called the citron homology domain, is often found after cysteine rich and pleckstrin homology (PH) domains at the C-terminal end of the proteins []. It acts as a regulatory domain and could be involved in macromolecular interactions [, ].; GO: 0005083 small GTPase regulator activity |
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=86.77 E-value=3.5 Score=33.96 Aligned_cols=48 Identities=17% Similarity=0.372 Sum_probs=34.1
Q ss_pred eEEEEEcCCCCceeeeeccCccceeee--------eEEEecCCc-eEEEEeCCcCcee
Q psy505 39 EVQIFDADNLHAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 39 ~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
+|=++|+.+++.+..+.. +.++.+++ +++....++ +.+||..+|+.+.
T Consensus 270 eVWv~D~~t~krv~Ri~l-~~~~~Si~Vsqd~~P~L~~~~~~~~~l~v~D~~tGk~~~ 326 (342)
T PF06433_consen 270 EVWVYDLKTHKRVARIPL-EHPIDSIAVSQDDKPLLYALSAGDGTLDVYDAATGKLVR 326 (342)
T ss_dssp EEEEEETTTTEEEEEEEE-EEEESEEEEESSSS-EEEEEETTTTEEEEEETTT--EEE
T ss_pred EEEEEECCCCeEEEEEeC-CCccceEEEccCCCcEEEEEcCCCCeEEEEeCcCCcEEe
Confidence 466669999999999874 24577777 445555677 9999999997654
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >PF10313 DUF2415: Uncharacterised protein domain (DUF2415); InterPro: IPR019417 This entry represents a short (30 residues) domain of unknown function found in a family of fungal proteins | Back alignment and domain information |
|---|
Probab=86.74 E-value=2 Score=24.47 Aligned_cols=29 Identities=7% Similarity=0.032 Sum_probs=18.4
Q ss_pred EEEEeecCC-e---EEEEecCCCCeEEEEecCCC
Q psy505 99 IVERLFSSS-L---VAVVSLSSPRKLTVCHFKRG 128 (161)
Q Consensus 99 v~~~~fs~~-~---~~~~s~~~d~~i~iWD~~~~ 128 (161)
+.++.|||+ + +...+. .-+.|.|+|++++
T Consensus 3 vR~~kFsP~~~~~DLL~~~E-~~g~vhi~D~R~~ 35 (43)
T PF10313_consen 3 VRCCKFSPEPGGNDLLAWAE-HQGRVHIVDTRSN 35 (43)
T ss_pred eEEEEeCCCCCcccEEEEEc-cCCeEEEEEcccC
Confidence 567889962 2 333333 3457999999863
|
It contains a characteristic DLL sequence motif. |
| >PF10168 Nup88: Nuclear pore component; InterPro: IPR019321 Nup88 can be divided into two structural domains; the N-terminal two-thirds of the protein have no obvious structural motifs | Back alignment and domain information |
|---|
Probab=86.46 E-value=6.8 Score=35.52 Aligned_cols=92 Identities=12% Similarity=0.183 Sum_probs=53.9
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCC-CceeeeeccCccceeeeeEEEecCCceEEEEeCCcCceeeEEeecC
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-HAKTMIPAHDSPLAALASLSVGTKSGYRLFSLNSIDTLEQIYENSQ 94 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-~~~~~l~~H~~~V~~l~~lasgs~dgiriwd~~~~~~~~~~~~~~~ 94 (161)
-|.-+.+||+|.++|..|. ..|-|-.+..+ ..-..+++-...|. .|-+.+.. .++..+
T Consensus 86 ~v~~i~~n~~g~~lal~G~---~~v~V~~LP~r~g~~~~~~~g~~~i~------------Crt~~v~~-----~~~~~~- 144 (717)
T PF10168_consen 86 EVHQISLNPTGSLLALVGP---RGVVVLELPRRWGKNGEFEDGKKEIN------------CRTVPVDE-----RFFTSN- 144 (717)
T ss_pred eEEEEEECCCCCEEEEEcC---CcEEEEEeccccCccccccCCCccee------------EEEEEech-----hhccCC-
Confidence 5778888999999999885 45666665432 11123433222222 34455522 123222
Q ss_pred cceEEEEEeecCCe---EEEEecCCCCeEEEEecCCC
Q psy505 95 EDVCIVERLFSSSL---VAVVSLSSPRKLTVCHFKRG 128 (161)
Q Consensus 95 ~~~~v~~~~fs~~~---~~~~s~~~d~~i~iWD~~~~ 128 (161)
....+..+.|+|.+ ..++--.+||++|+||+...
T Consensus 145 ~~~~i~qv~WhP~s~~~~~l~vLtsdn~lR~y~~~~~ 181 (717)
T PF10168_consen 145 SSLEIKQVRWHPWSESDSHLVVLTSDNTLRLYDISDP 181 (717)
T ss_pred CCceEEEEEEcCCCCCCCeEEEEecCCEEEEEecCCC
Confidence 24578888898742 33333346899999999764
|
It is, however, where it binds to Nup98; one of the components of the nuclear pore. The C-terminal end is a predicted coiled-coil domain []. Nup88 is over expressed in tumour cells []. |
| >KOG2444|consensus | Back alignment and domain information |
|---|
Probab=86.32 E-value=1.4 Score=34.17 Aligned_cols=36 Identities=11% Similarity=0.153 Sum_probs=25.2
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccC-ccce
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD-SPLA 62 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~-~~V~ 62 (161)
++.+..+ +.. ||.||.|+..-.+.+-..-.|+ .++.
T Consensus 113 ~~~~~c~-~~~-dg~ir~~n~~p~k~~g~~g~h~~~~~e 149 (238)
T KOG2444|consen 113 DSSLGCV-GAQ-DGRIRACNIKPNKVLGYVGQHNFESGE 149 (238)
T ss_pred ccceeEE-ecc-CCceeeeccccCceeeeeccccCCCcc
Confidence 4444444 442 9999999999888877777777 4444
|
|
| >PF11715 Nup160: Nucleoporin Nup120/160; InterPro: IPR021717 Nup120 is conserved from fungi to plants to humans, and is homologous with the Nup160 of vertebrates | Back alignment and domain information |
|---|
Probab=86.28 E-value=1.5 Score=37.99 Aligned_cols=28 Identities=14% Similarity=0.198 Sum_probs=21.4
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeee
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMI 54 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l 54 (161)
+..++++-.. |+.+|+||+.+++++.++
T Consensus 229 ~~~~l~tl~~--D~~LRiW~l~t~~~~~~~ 256 (547)
T PF11715_consen 229 DDTFLFTLSR--DHTLRIWSLETGQCLATI 256 (547)
T ss_dssp TTTEEEEEET--TSEEEEEETTTTCEEEEE
T ss_pred CCCEEEEEeC--CCeEEEEECCCCeEEEEe
Confidence 4456655444 999999999999996655
|
The nuclear core complex, or NPC, mediates macromolecular transport across the nuclear envelope. Deletion of the NUP120 gene causes clustering of NPCs at one side of the nuclear envelope, moderate nucleolar fragmentation and slower cell growth []. The vertebrate NPC is estimated to contain between 30 and 60 different proteins. most of which are not known. Two important ones in creating the nucleoporin basket are Nup98 and Nup153, and Nup120, in conjunction with Nup 133, interacts with these two and itself plays a role in mRNA export []. Nup160, Nup133, Nup96, and Nup107 are all targets of phosphorylation. The phosphorylation sites are clustered mainly at the N-terminal regions of these proteins, which are predicted to be natively disordered. The entire Nup107-160 subcomplex is stable throughout the cell cycle, thus it seems unlikely that phosphorylation affects interactions within the Nup107-160 subcomplex, but rather that it regulates the association of the subcomplex with the NPC and other proteins []. ; PDB: 3F7F_D 3H7N_D 3HXR_A. |
| >KOG2395|consensus | Back alignment and domain information |
|---|
Probab=86.06 E-value=10 Score=33.21 Aligned_cols=86 Identities=12% Similarity=0.107 Sum_probs=49.7
Q ss_pred cceEEEEEcCCCCc--eeeeeccC----ccceeee-----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEee
Q psy505 37 IGEVQIFDADNLHA--KTMIPAHD----SPLAALA-----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLF 104 (161)
Q Consensus 37 dg~v~iWd~~~~~~--~~~l~~H~----~~V~~l~-----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~f 104 (161)
|..|-=||++-... +..-++|. ..-.|.+ +++.||.+| |||||- .+..-...+-|-..++.-+. -
T Consensus 403 ~n~vfriDpRv~~~~kl~~~q~kqy~~k~nFsc~aTT~sG~IvvgS~~GdIRLYdr-i~~~AKTAlPgLG~~I~hVd--v 479 (644)
T KOG2395|consen 403 DNSVFRIDPRVQGKNKLAVVQSKQYSTKNNFSCFATTESGYIVVGSLKGDIRLYDR-IGRRAKTALPGLGDAIKHVD--V 479 (644)
T ss_pred CCceEEecccccCcceeeeeeccccccccccceeeecCCceEEEeecCCcEEeehh-hhhhhhhcccccCCceeeEE--e
Confidence 77888899884322 22223332 3344555 999999999 999996 44433334444444433344 4
Q ss_pred cCCeEEEEecCCCCeEEEEecC
Q psy505 105 SSSLVAVVSLSSPRKLTVCHFK 126 (161)
Q Consensus 105 s~~~~~~~s~~~d~~i~iWD~~ 126 (161)
+.+|-++++. .+..|.+-|+.
T Consensus 480 tadGKwil~T-c~tyLlLi~t~ 500 (644)
T KOG2395|consen 480 TADGKWILAT-CKTYLLLIDTL 500 (644)
T ss_pred eccCcEEEEe-cccEEEEEEEe
Confidence 4455444432 24567777754
|
|
| >PF14781 BBS2_N: Ciliary BBSome complex subunit 2, N-terminal | Back alignment and domain information |
|---|
Probab=85.83 E-value=8.1 Score=27.56 Aligned_cols=40 Identities=8% Similarity=0.028 Sum_probs=28.5
Q ss_pred CCeEEEEecCCCCeEEEEEecCceEEEEE-----CCcEEEEEecc
Q psy505 117 PRKLTVCHFKRGSEICNYSFSNTILAVKL-----NRKKEEEEDEE 156 (161)
Q Consensus 117 d~~i~iWD~~~~~~i~~l~~~~~V~~v~~-----~~~~~vv~~~~ 156 (161)
...|-.||++++.-+-.-..++.|.++.+ .+.-+++|..+
T Consensus 72 ~t~llaYDV~~N~d~Fyke~~DGvn~i~~g~~~~~~~~l~ivGGn 116 (136)
T PF14781_consen 72 QTSLLAYDVENNSDLFYKEVPDGVNAIVIGKLGDIPSPLVIVGGN 116 (136)
T ss_pred cceEEEEEcccCchhhhhhCccceeEEEEEecCCCCCcEEEECce
Confidence 35799999998875533345688888877 35677777655
|
|
| >KOG3621|consensus | Back alignment and domain information |
|---|
Probab=85.60 E-value=3 Score=37.24 Aligned_cols=89 Identities=13% Similarity=0.132 Sum_probs=56.6
Q ss_pred eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEE-----EE--Eec
Q psy505 66 SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEIC-----NY--SFS 137 (161)
Q Consensus 66 ~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~-----~l--~~~ 137 (161)
+++-|+.-| +.+|+-..|++.....++..+ .++....|++...+|.|+..+.|.++-+..+..-. .. +|+
T Consensus 47 ~l~~GsS~G~lyl~~R~~~~~~~~~~~~~~~--~~~~~~vs~~e~lvAagt~~g~V~v~ql~~~~p~~~~~~t~~d~~~~ 124 (726)
T KOG3621|consen 47 YLAMGSSAGSVYLYNRHTGEMRKLKNEGATG--ITCVRSVSSVEYLVAAGTASGRVSVFQLNKELPRDLDYVTPCDKSHK 124 (726)
T ss_pred eEEEecccceEEEEecCchhhhcccccCccc--eEEEEEecchhHhhhhhcCCceEEeehhhccCCCcceeeccccccCC
Confidence 999999999 999998887765333333222 23344556655555555566678888776643211 11 245
Q ss_pred CceEEEEECCcEEEEEecc
Q psy505 138 NTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 138 ~~V~~v~~~~~~~vv~~~~ 156 (161)
..|.++.|+++..-+-..+
T Consensus 125 ~rVTal~Ws~~~~k~ysGD 143 (726)
T KOG3621|consen 125 CRVTALEWSKNGMKLYSGD 143 (726)
T ss_pred ceEEEEEecccccEEeecC
Confidence 6899999999866554443
|
|
| >PF12894 Apc4_WD40: Anaphase-promoting complex subunit 4 WD40 domain | Back alignment and domain information |
|---|
Probab=85.50 E-value=2.7 Score=24.24 Aligned_cols=32 Identities=3% Similarity=-0.016 Sum_probs=22.7
Q ss_pred EEEEEeecCCeEEEEecCCCCeEEEEecCCCCe
Q psy505 98 CIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE 130 (161)
Q Consensus 98 ~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~ 130 (161)
.|..+.|+|..-.+|-++.++.|.|+.+ +++.
T Consensus 13 ~v~~~~w~P~mdLiA~~t~~g~v~v~Rl-~~qr 44 (47)
T PF12894_consen 13 RVSCMSWCPTMDLIALGTEDGEVLVYRL-NWQR 44 (47)
T ss_pred cEEEEEECCCCCEEEEEECCCeEEEEEC-CCcC
Confidence 4678899995544555556889999998 4543
|
|
| >PF07676 PD40: WD40-like Beta Propeller Repeat; InterPro: IPR011659 WD-40 repeats (also known as WD or beta-transducin repeats) are short ~40 amino acid motifs, often terminating in a Trp-Asp (W-D) dipeptide | Back alignment and domain information |
|---|
Probab=84.66 E-value=1 Score=24.28 Aligned_cols=25 Identities=16% Similarity=0.356 Sum_probs=17.6
Q ss_pred EEeecCCCceEEEEcCCCCc--ceEEEE
Q psy505 18 CCLCVNSDNCYLAYPGSNSI--GEVQIF 43 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~d--g~v~iW 43 (161)
...+++|||+.|++++.. + |.-.||
T Consensus 12 ~~p~~SpDGk~i~f~s~~-~~~g~~diy 38 (39)
T PF07676_consen 12 GSPAWSPDGKYIYFTSNR-NDRGSFDIY 38 (39)
T ss_dssp EEEEE-TTSSEEEEEEEC-T--SSEEEE
T ss_pred cCEEEecCCCEEEEEecC-CCCCCcCEE
Confidence 345567899999998875 6 666666
|
WD40 repeats usually assume a 7-8 bladed beta-propeller fold, but proteins have been found with 4 to 16 repeated units, which also form a circularised beta-propeller structure. WD-repeat proteins are a large family found in all eukaryotes and are implicated in a variety of functions ranging from signal transduction and transcription regulation to cell cycle control and apoptosis. Repeated WD40 motifs act as a site for protein-protein interaction, and proteins containing WD40 repeats are known to serve as platforms for the assembly of protein complexes or mediators of transient interplay among other proteins. The specificity of the proteins is determined by the sequences outside the repeats themselves. Examples of such complexes are G proteins (beta subunit is a beta-propeller), TAFII transcription factor, and E3 ubiquitin ligase [, ]. In Arabidopsis spp., several WD40-containing proteins act as key regulators of plant-specific developmental events. This region appears to be related to the IPR001680 from INTERPRO repeat. This model is likely to miss copies within a sequence.; PDB: 2HQS_D 1C5K_A 2IVZ_A 2W8B_D 3IAX_A 1CRZ_A 1N6F_D 1N6D_C 1N6E_C 1K32_A .... |
| >KOG4460|consensus | Back alignment and domain information |
|---|
Probab=84.48 E-value=12 Score=32.91 Aligned_cols=92 Identities=10% Similarity=0.203 Sum_probs=51.3
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCC-CceeeeeccCccceeeeeEEEecCCceEEEEeCCcCceeeEEeecC
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-HAKTMIPAHDSPLAALASLSVGTKSGYRLFSLNSIDTLEQIYENSQ 94 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-~~~~~l~~H~~~V~~l~~lasgs~dgiriwd~~~~~~~~~~~~~~~ 94 (161)
.|.-+..++.|..+|.+|. +|.+ |..+..+ -.-..++..+..|+| |.+.+.+ ++|...
T Consensus 105 eV~~vl~s~~GS~VaL~G~--~Gi~-vMeLp~rwG~~s~~eDgk~~v~C------------Rt~~i~~-----~~ftss- 163 (741)
T KOG4460|consen 105 EVYQVLLSPTGSHVALIGI--KGLM-VMELPKRWGKNSEFEDGKSTVNC------------RTTPVAE-----RFFTSS- 163 (741)
T ss_pred EEEEEEecCCCceEEEecC--CeeE-EEEchhhcCccceecCCCceEEE------------Eeecccc-----eeeccC-
Confidence 4666777889999999887 6654 3343211 111233332333333 3444422 233322
Q ss_pred cceEEEEEeecCCe-----EEEEecCCCCeEEEEecCCCCe
Q psy505 95 EDVCIVERLFSSSL-----VAVVSLSSPRKLTVCHFKRGSE 130 (161)
Q Consensus 95 ~~~~v~~~~fs~~~-----~~~~s~~~d~~i~iWD~~~~~~ 130 (161)
....+...+|+|+. +.+.+ +|+++||||...-+.
T Consensus 164 ~~ltl~Qa~WHP~S~~D~hL~iL~--sdnviRiy~lS~~te 202 (741)
T KOG4460|consen 164 TSLTLKQAAWHPSSILDPHLVLLT--SDNVIRIYSLSEPTE 202 (741)
T ss_pred CceeeeeccccCCccCCceEEEEe--cCcEEEEEecCCcch
Confidence 24567777888755 23333 589999999876543
|
|
| >PF07569 Hira: TUP1-like enhancer of split; InterPro: IPR011494 The Hira proteins are found in a range of eukaryotes and are implicated in the assembly of repressive chromatin | Back alignment and domain information |
|---|
Probab=83.69 E-value=5 Score=30.78 Aligned_cols=50 Identities=20% Similarity=0.174 Sum_probs=33.4
Q ss_pred EEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE-E--------------ecCceEEEEECCcEE
Q psy505 99 IVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY-S--------------FSNTILAVKLNRKKE 150 (161)
Q Consensus 99 v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l-~--------------~~~~V~~v~~~~~~~ 150 (161)
+.-+..+.+.+..++ .++.+++||+++++++-.- + ....|..+.++.++.
T Consensus 15 ~~~l~~~~~~Ll~iT--~~G~l~vWnl~~~k~~~~~~Si~pll~~~~~~~~~~~~~i~~~~lt~~G~ 79 (219)
T PF07569_consen 15 VSFLECNGSYLLAIT--SSGLLYVWNLKKGKAVLPPVSIAPLLNSSPVSDKSSSPNITSCSLTSNGV 79 (219)
T ss_pred eEEEEeCCCEEEEEe--CCCeEEEEECCCCeeccCCccHHHHhcccccccCCCCCcEEEEEEcCCCC
Confidence 444555666666665 4679999999999876432 1 124688888887643
|
These proteins also contain IPR001680 from INTERPRO.; GO: 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus |
| >PF14583 Pectate_lyase22: Oligogalacturonate lyase; PDB: 3C5M_C 3PE7_A | Back alignment and domain information |
|---|
Probab=83.40 E-value=26 Score=29.45 Aligned_cols=129 Identities=12% Similarity=0.144 Sum_probs=60.6
Q ss_pred CCCceEEEEcCCCCcce--EEEEEcCCCCceeeeecc-Cccc-eeee-----eEEEecCCceEEEEeCCcCceeeEEeec
Q psy505 23 NSDNCYLAYPGSNSIGE--VQIFDADNLHAKTMIPAH-DSPL-AALA-----SLSVGTKSGYRLFSLNSIDTLEQIYENS 93 (161)
Q Consensus 23 ~~d~~~la~~g~~~dg~--v~iWd~~~~~~~~~l~~H-~~~V-~~l~-----~lasgs~dgiriwd~~~~~~~~~~~~~~ 93 (161)
.+||..|+..+.. ||. +.+-|+.+++..+.-++- .+.. ..++ ++..-+.+.++--|+++.+ ...+++-.
T Consensus 44 t~dG~kllF~s~~-dg~~nly~lDL~t~~i~QLTdg~g~~~~g~~~s~~~~~~~Yv~~~~~l~~vdL~T~e-~~~vy~~p 121 (386)
T PF14583_consen 44 TDDGRKLLFASDF-DGNRNLYLLDLATGEITQLTDGPGDNTFGGFLSPDDRALYYVKNGRSLRRVDLDTLE-ERVVYEVP 121 (386)
T ss_dssp -TTS-EEEEEE-T-TSS-EEEEEETTT-EEEE---SS-B-TTT-EE-TTSSEEEEEETTTEEEEEETTT---EEEEEE--
T ss_pred CCCCCEEEEEecc-CCCcceEEEEcccCEEEECccCCCCCccceEEecCCCeEEEEECCCeEEEEECCcCc-EEEEEECC
Confidence 5588777777765 775 666699988765433321 1111 2222 2333344457777887765 33555544
Q ss_pred CcceEEEEEee--cCCeEEEEec----------------------CCCCeEEEEecCCCCeEEEEEecCceEEEEECCc-
Q psy505 94 QEDVCIVERLF--SSSLVAVVSL----------------------SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK- 148 (161)
Q Consensus 94 ~~~~~v~~~~f--s~~~~~~~s~----------------------~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~- 148 (161)
.+ +.-...+ +.+...+++. ..+..|.-=|+++|+.-..+.-...+.-+.|+|.
T Consensus 122 ~~--~~g~gt~v~n~d~t~~~g~e~~~~d~~~l~~~~~f~e~~~a~p~~~i~~idl~tG~~~~v~~~~~wlgH~~fsP~d 199 (386)
T PF14583_consen 122 DD--WKGYGTWVANSDCTKLVGIEISREDWKPLTKWKGFREFYEARPHCRIFTIDLKTGERKVVFEDTDWLGHVQFSPTD 199 (386)
T ss_dssp TT--EEEEEEEEE-TTSSEEEEEEEEGGG-----SHHHHHHHHHC---EEEEEEETTT--EEEEEEESS-EEEEEEETTE
T ss_pred cc--cccccceeeCCCccEEEEEEEeehhccCccccHHHHHHHhhCCCceEEEEECCCCceeEEEecCccccCcccCCCC
Confidence 32 2222223 3344434332 1233455568888886444455677888999996
Q ss_pred -EEEEEec
Q psy505 149 -KEEEEDE 155 (161)
Q Consensus 149 -~~vv~~~ 155 (161)
.+++-+.
T Consensus 200 p~li~fCH 207 (386)
T PF14583_consen 200 PTLIMFCH 207 (386)
T ss_dssp EEEEEEEE
T ss_pred CCEEEEec
Confidence 5555544
|
|
| >PF12234 Rav1p_C: RAVE protein 1 C terminal; InterPro: IPR022033 This domain family is found in eukaryotes, and is typically between 621 and 644 amino acids in length | Back alignment and domain information |
|---|
Probab=82.95 E-value=35 Score=30.61 Aligned_cols=87 Identities=18% Similarity=0.169 Sum_probs=55.1
Q ss_pred cceEEEEEcCCCCceeeee-ccCccceeee---------eEEEecCCceEEEEeC-----Cc----CceeeE-EeecCcc
Q psy505 37 IGEVQIFDADNLHAKTMIP-AHDSPLAALA---------SLSVGTKSGYRLFSLN-----SI----DTLEQI-YENSQED 96 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~---------~lasgs~dgiriwd~~-----~~----~~~~~~-~~~~~~~ 96 (161)
..++.|||.+.+...+.-. ...++|.++. .||.|=...|.+|--. .. .+++++ .+.+++
T Consensus 50 ~~~LtIWD~~~~~lE~~~~f~~~~~I~dLDWtst~d~qsiLaVGf~~~v~l~~Q~R~dy~~~~p~w~~i~~i~i~~~T~- 128 (631)
T PF12234_consen 50 RSELTIWDTRSGVLEYEESFSEDDPIRDLDWTSTPDGQSILAVGFPHHVLLYTQLRYDYTNKGPSWAPIRKIDISSHTP- 128 (631)
T ss_pred CCEEEEEEcCCcEEEEeeeecCCCceeeceeeecCCCCEEEEEEcCcEEEEEEccchhhhcCCcccceeEEEEeecCCC-
Confidence 3479999999887554322 4567888887 7777766668887531 11 122222 223331
Q ss_pred eEEEEEeecCCeEEEEecCCCCeEEEEecC
Q psy505 97 VCIVERLFSSSLVAVVSLSSPRKLTVCHFK 126 (161)
Q Consensus 97 ~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~ 126 (161)
-.|.+..|-++|..+++. +|.+.|+|-.
T Consensus 129 h~Igds~Wl~~G~LvV~s--GNqlfv~dk~ 156 (631)
T PF12234_consen 129 HPIGDSIWLKDGTLVVGS--GNQLFVFDKW 156 (631)
T ss_pred CCccceeEecCCeEEEEe--CCEEEEECCC
Confidence 135677788899888764 4689998743
|
This family is the C-terminal region of the protein RAVE (regulator of the ATPase of vacuolar and endosomal membranes). Rav1p is involved in regulating the glucose dependent assembly and disassembly of vacuolar ATPase V1 and V0 subunits. |
| >COG0823 TolB Periplasmic component of the Tol biopolymer transport system [Intracellular trafficking and secretion] | Back alignment and domain information |
|---|
Probab=82.89 E-value=12 Score=31.63 Aligned_cols=122 Identities=13% Similarity=0.144 Sum_probs=67.9
Q ss_pred eecCCCceEEEEcCCCC-c-ceEEEEEcCCCCceee--eeccCccceeee-----eEEEecCCc---eEEEEeCCcCcee
Q psy505 20 LCVNSDNCYLAYPGSNS-I-GEVQIFDADNLHAKTM--IPAHDSPLAALA-----SLSVGTKSG---YRLFSLNSIDTLE 87 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~-d-g~v~iWd~~~~~~~~~--l~~H~~~V~~l~-----~lasgs~dg---iriwd~~~~~~~~ 87 (161)
=.++|++..+++..... . ..+.++|+.+++.... +.++.. .-..+ ++.+...|| |-++|+.++. +.
T Consensus 198 p~ws~~~~~~~y~~f~~~~~~~i~~~~l~~g~~~~i~~~~g~~~-~P~fspDG~~l~f~~~rdg~~~iy~~dl~~~~-~~ 275 (425)
T COG0823 198 PAWSPDGKKLAYVSFELGGCPRIYYLDLNTGKRPVILNFNGNNG-APAFSPDGSKLAFSSSRDGSPDIYLMDLDGKN-LP 275 (425)
T ss_pred cccCcCCCceEEEEEecCCCceEEEEeccCCccceeeccCCccC-CccCCCCCCEEEEEECCCCCccEEEEcCCCCc-ce
Confidence 34467888777653321 2 3599999999875544 445543 22233 444555566 7777887755 33
Q ss_pred eEEeecCcceEEEEEeecCCeEEEE--ecCCCC-eEEEEecCCCCeEEEEEec--CceEEEEECCc
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVV--SLSSPR-KLTVCHFKRGSEICNYSFS--NTILAVKLNRK 148 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~--s~~~d~-~i~iWD~~~~~~i~~l~~~--~~V~~v~~~~~ 148 (161)
++-++.. .. ..-.|+|+|..++ |....+ .|-+.|.+.++. ..+.+. ... .-.+|||
T Consensus 276 ~Lt~~~g--i~-~~Ps~spdG~~ivf~Sdr~G~p~I~~~~~~g~~~-~riT~~~~~~~-~p~~Spd 336 (425)
T COG0823 276 RLTNGFG--IN-TSPSWSPDGSKIVFTSDRGGRPQIYLYDLEGSQV-TRLTFSGGGNS-NPVWSPD 336 (425)
T ss_pred ecccCCc--cc-cCccCCCCCCEEEEEeCCCCCcceEEECCCCCce-eEeeccCCCCc-CccCCCC
Confidence 3322221 11 1456888776655 321111 477778876654 555542 222 5667776
|
|
| >PF06433 Me-amine-dh_H: Methylamine dehydrogenase heavy chain (MADH); InterPro: IPR009451 Methylamine dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=82.10 E-value=11 Score=31.02 Aligned_cols=56 Identities=16% Similarity=0.157 Sum_probs=32.6
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeec--CC-eEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFS--SS-LVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs--~~-~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
|-++|+.+++.+.++--.+ . +.++..+ .. .++.++. .++.|.|||..+|+.+.++.
T Consensus 271 VWv~D~~t~krv~Ri~l~~--~--~~Si~Vsqd~~P~L~~~~~-~~~~l~v~D~~tGk~~~~~~ 329 (342)
T PF06433_consen 271 VWVYDLKTHKRVARIPLEH--P--IDSIAVSQDDKPLLYALSA-GDGTLDVYDAATGKLVRSIE 329 (342)
T ss_dssp EEEEETTTTEEEEEEEEEE--E--ESEEEEESSSS-EEEEEET-TTTEEEEEETTT--EEEEE-
T ss_pred EEEEECCCCeEEEEEeCCC--c--cceEEEccCCCcEEEEEcC-CCCeEEEEeCcCCcEEeehh
Confidence 6677888877665443222 2 3234444 22 2333333 56799999999999998886
|
4.99.3 from EC) is a periplasmic quinoprotein found in several methyltrophic bacteria []. It is induced when grown on methylamine as a carbon source MADH and catalyses the oxidative deamination of amines to their corresponding aldehydes. The redox cofactor of this enzyme is tryptophan tryptophylquinone (TTQ). Electrons derived from the oxidation of methylamine are passed to an electron acceptor, which is usually the blue-copper protein amicyanin (IPR002386 from INTERPRO). |
| >TIGR03075 PQQ_enz_alc_DH PQQ-dependent dehydrogenase, methanol/ethanol family | Back alignment and domain information |
|---|
Probab=81.41 E-value=11 Score=32.86 Aligned_cols=52 Identities=15% Similarity=0.132 Sum_probs=37.2
Q ss_pred ceEEEEEcCCCCceeeeeccCccceee-e----eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 38 GEVQIFDADNLHAKTMIPAHDSPLAAL-A----SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 38 g~v~iWd~~~~~~~~~l~~H~~~V~~l-~----~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
|.+.=+|+.+|+.+...+...-...+. . ++..++.|| ++.+|.+||+.+-+.
T Consensus 441 g~l~AiD~~tGk~~W~~~~~~p~~~~~l~t~g~lvf~g~~~G~l~a~D~~TGe~lw~~ 498 (527)
T TIGR03075 441 GSLIAWDPITGKIVWEHKEDFPLWGGVLATAGDLVFYGTLEGYFKAFDAKTGEELWKF 498 (527)
T ss_pred eeEEEEeCCCCceeeEecCCCCCCCcceEECCcEEEEECCCCeEEEEECCCCCEeEEE
Confidence 678889999999888765322212221 1 666688899 999999999976544
|
This protein family has a phylogenetic distribution very similar to that coenzyme PQQ biosynthesis enzymes, as shown by partial phylogenetic profiling. Genes in this family often are found adjacent to the PQQ biosynthesis genes themselves. An unusual, strained disulfide bond between adjacent Cys residues contributes to PQQ-binding, as does a Trp residue that is part of a PQQ enzyme repeat (see pfam01011). Characterized members include the dehydrogenase subunit of a membrane-anchored, three subunit alcohol (ethanol) dehydrogenase of Gluconobacter suboxydans, a homodimeric ethanol dehydrogenase in Pseudomonas aeruginosa, and the large subunit of an alpha2/beta2 heterotetrameric methanol dehydrogenase in Methylobacterium extorquens. |
| >COG3391 Uncharacterized conserved protein [Function unknown] | Back alignment and domain information |
|---|
Probab=80.93 E-value=30 Score=28.59 Aligned_cols=132 Identities=11% Similarity=0.063 Sum_probs=77.9
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------eEEEec-CCc-eEEEEeCCcCceee
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------SLSVGT-KSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~lasgs-~dg-iriwd~~~~~~~~~ 88 (161)
.++.++++..+...... +..|.+-|..+.+..+.+.--..| ..++ +++-.. .++ +-+.|..+......
T Consensus 78 ~i~v~~~~~~vyv~~~~-~~~v~vid~~~~~~~~~~~vG~~P-~~~~~~~~~~~vYV~n~~~~~~~vsvid~~t~~~~~~ 155 (381)
T COG3391 78 GVAVNPAGNKVYVTTGD-SNTVSVIDTATNTVLGSIPVGLGP-VGLAVDPDGKYVYVANAGNGNNTVSVIDAATNKVTAT 155 (381)
T ss_pred ceeeCCCCCeEEEecCC-CCeEEEEcCcccceeeEeeeccCC-ceEEECCCCCEEEEEecccCCceEEEEeCCCCeEEEE
Confidence 34456666644333432 689999998887776665422222 2222 333332 245 88888888766555
Q ss_pred EEeecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecCCCCeEE-----EEEecCceEEEEECCc--EEEEEecc
Q psy505 89 IYENSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGSEIC-----NYSFSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~~i~-----~l~~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
...|.. + ..++++|++. +.+....+++|.+.|.+...... .+.-...-..+.++|+ ++.|....
T Consensus 156 ~~vG~~-P---~~~a~~p~g~~vyv~~~~~~~v~vi~~~~~~v~~~~~~~~~~~~~~P~~i~v~~~g~~~yV~~~~ 227 (381)
T COG3391 156 IPVGNT-P---TGVAVDPDGNKVYVTNSDDNTVSVIDTSGNSVVRGSVGSLVGVGTGPAGIAVDPDGNRVYVANDG 227 (381)
T ss_pred EecCCC-c---ceEEECCCCCeEEEEecCCCeEEEEeCCCcceeccccccccccCCCCceEEECCCCCEEEEEecc
Confidence 444432 2 5788999876 44555678899999987766553 1222234455777766 45554443
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 161 | |||
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 3e-17 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 2e-04 |
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 76.2 bits (187), Expect = 3e-17
Identities = 10/83 (12%), Positives = 30/83 (36%), Gaps = 4/83 (4%)
Query: 66 SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125
L + T + ++++ + I + V L ++ VA V+ + +
Sbjct: 33 CLILSTLKSFEIYNV---HPVAHIMSQEMRHLSKVRMLHRTNYVAFVT-GVKEVVHIWDD 88
Query: 126 KRGSEICNYSFSNTILAVKLNRK 148
+ ++ + + L+R+
Sbjct: 89 VKKQDVSRIKVDAPVKDLFLSRE 111
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A Length = 355 | Back alignment and structure |
|---|
Score = 39.2 bits (91), Expect = 2e-04
Identities = 12/79 (15%), Positives = 21/79 (26%), Gaps = 20/79 (25%)
Query: 10 TPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQI----------------FDADNLHAKTM 53
G+C N L Y ++G++ I L +
Sbjct: 135 DDIRFGGVCEFS----NGLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVL 190
Query: 54 IPAHDSPLAALASLSVGTK 72
I AH +P+ +
Sbjct: 191 IKAHTNPIKMVRLNRKSDM 209
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 161 | |||
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.94 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.93 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.93 | |
| 2ynn_A | 304 | Coatomer subunit beta'; protein transport, peptide | 99.92 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.92 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.92 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.91 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.91 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.91 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.91 | |
| 2pbi_B | 354 | Guanine nucleotide-binding protein subunit beta 5; | 99.91 | |
| 4gqb_B | 344 | Methylosome protein 50; TIM barrel, beta-propeller | 99.91 | |
| 1vyh_C | 410 | Platelet-activating factor acetylhydrolase IB alph | 99.9 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.9 | |
| 3ow8_A | 321 | WD repeat-containing protein 61; structural genomi | 99.9 | |
| 3frx_A | 319 | Guanine nucleotide-binding protein subunit beta- l | 99.9 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.9 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.89 | |
| 1got_B | 340 | GT-beta; complex (GTP-binding/transducer), G prote | 99.89 | |
| 4ery_A | 312 | WD repeat-containing protein 5; WD40, WIN motif, b | 99.89 | |
| 2hes_X | 330 | YDR267CP; beta-propeller, WD40 repeat, biosyntheti | 99.89 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.89 | |
| 2pm7_B | 297 | Protein transport protein SEC13, protein transport | 99.89 | |
| 3fm0_A | 345 | Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD r | 99.89 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.88 | |
| 1nr0_A | 611 | Actin interacting protein 1; beta propeller, WD40 | 99.88 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.88 | |
| 2xzm_R | 343 | RACK1; ribosome, translation; 3.93A {Tetrahymena t | 99.88 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.87 | |
| 3iz6_a | 380 | 40S ribosomal protein RACK1 (RACK1); eukaryotic ri | 99.87 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.87 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.87 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.87 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.87 | |
| 1erj_A | 393 | Transcriptional repressor TUP1; beta-propeller, tr | 99.87 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.86 | |
| 2ymu_A | 577 | WD-40 repeat protein; unknown function, two domain | 99.86 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.86 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.86 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.86 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.86 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.86 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.86 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.85 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.85 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.85 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.85 | |
| 3bg1_A | 316 | Protein SEC13 homolog; NPC, transport, WD repeat, | 99.85 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.85 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.85 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.85 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.85 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.84 | |
| 2j04_B | 524 | YDR362CP, TAU91; beta propeller, type 2 promoters, | 99.84 | |
| 3dwl_C | 377 | Actin-related protein 2/3 complex subunit 1; prope | 99.84 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.84 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.84 | |
| 3f3f_A | 351 | Nucleoporin SEH1; structural protein, protein comp | 99.84 | |
| 3dm0_A | 694 | Maltose-binding periplasmic protein fused with RAC | 99.84 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.84 | |
| 4g56_B | 357 | MGC81050 protein; protein arginine methyltransfera | 99.84 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.84 | |
| 3v7d_B | 464 | Cell division control protein 4; WD 40 domain, pho | 99.83 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.83 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.83 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.83 | |
| 3gre_A | 437 | Serine/threonine-protein kinase VPS15; seven-blade | 99.83 | |
| 3ei3_B | 383 | DNA damage-binding protein 2; UV-damage, DDB, nucl | 99.83 | |
| 2aq5_A | 402 | Coronin-1A; WD40 repeat, 7-bladed beta-propeller, | 99.83 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.82 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.82 | |
| 4aow_A | 340 | Guanine nucleotide-binding protein subunit beta-2; | 99.82 | |
| 3vl1_A | 420 | 26S proteasome regulatory subunit RPN14; beta-prop | 99.82 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.82 | |
| 3mmy_A | 368 | MRNA export factor; mRNA export, nuclear protein; | 99.82 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.82 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.82 | |
| 2ovr_B | 445 | FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 | 99.82 | |
| 2vdu_B | 450 | TRNA (guanine-N(7)-)-methyltransferase- associated | 99.82 | |
| 3dw8_B | 447 | Serine/threonine-protein phosphatase 2A 55 kDa RE | 99.82 | |
| 3sfz_A | 1249 | APAF-1, apoptotic peptidase activating factor 1; a | 99.82 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.82 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.82 | |
| 3k26_A | 366 | Polycomb protein EED; WD40, structural genomics, N | 99.81 | |
| 4h5i_A | 365 | Guanine nucleotide-exchange factor SEC12; copii ve | 99.81 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.81 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.81 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.81 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.81 | |
| 1k8k_C | 372 | P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta- | 99.81 | |
| 1p22_A | 435 | F-BOX/WD-repeat protein 1A; ubiquitination, degrad | 99.81 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.81 | |
| 2oaj_A | 902 | Protein SNI1; WD40 repeat, beta propeller, endocyt | 99.81 | |
| 2w18_A | 356 | PALB2, fancn, partner and localizer of BRCA2; fanc | 99.81 | |
| 1gxr_A | 337 | ESG1, transducin-like enhancer protein 1; transcri | 99.81 | |
| 4aez_A | 401 | CDC20, WD repeat-containing protein SLP1; cell cyc | 99.81 | |
| 3zwl_B | 369 | Eukaryotic translation initiation factor 3 subuni; | 99.8 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.8 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.8 | |
| 3jrp_A | 379 | Fusion protein of protein transport protein SEC13 | 99.8 | |
| 3mkq_A | 814 | Coatomer beta'-subunit; beta-propeller, alpha-sole | 99.8 | |
| 3lrv_A | 343 | PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiqu | 99.8 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.79 | |
| 4e54_B | 435 | DNA damage-binding protein 2; beta barrel, double | 99.79 | |
| 1r5m_A | 425 | SIR4-interacting protein SIF2; transcription corep | 99.79 | |
| 4gq1_A | 393 | NUP37; propeller, transport protein; 2.40A {Schizo | 99.79 | |
| 2xyi_A | 430 | Probable histone-binding protein CAF1; transcripti | 99.79 | |
| 4gga_A | 420 | P55CDC, cell division cycle protein 20 homolog; ce | 99.79 | |
| 2pm9_A | 416 | Protein WEB1, protein transport protein SEC31; bet | 99.79 | |
| 1sq9_A | 397 | Antiviral protein SKI8; WD repeat, beta-transducin | 99.78 | |
| 3vu4_A | 355 | KMHSV2; beta-propeller fold, protein transport; 2. | 99.78 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.78 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.78 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.78 | |
| 4ggc_A | 318 | P55CDC, cell division cycle protein 20 homolog; ce | 99.78 | |
| 3i2n_A | 357 | WD repeat-containing protein 92; WD40 repeats, str | 99.77 | |
| 2j04_A | 588 | TAU60, YPL007P, hypothetical protein YPL007C; beta | 99.77 | |
| 3odt_A | 313 | Protein DOA1; ubiquitin, nuclear protein; HET: MSE | 99.76 | |
| 4a11_B | 408 | DNA excision repair protein ERCC-8; DNA binding pr | 99.76 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.75 | |
| 3jro_A | 753 | Fusion protein of protein transport protein SEC13 | 99.75 | |
| 1pgu_A | 615 | Actin interacting protein 1; WD repeat, seven-blad | 99.74 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.73 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.71 | |
| 1l0q_A | 391 | Surface layer protein; SLP, S-layer, 7-bladed beta | 99.71 | |
| 1yfq_A | 342 | Cell cycle arrest protein BUB3; WD repeat WD40 rep | 99.7 | |
| 3bws_A | 433 | Protein LP49; two-domain, immunoglobulin-like, 7-b | 99.67 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.49 | |
| 2oit_A | 434 | Nucleoporin 214KDA; NH2 terminal domain of NUP214/ | 99.47 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.41 | |
| 2hqs_A | 415 | Protein TOLB; TOLB, PAL, TOL, transport protein-li | 99.4 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.4 | |
| 1nir_A | 543 | Nitrite reductase; hemoprotein, denitrification, d | 99.37 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.35 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.34 | |
| 3vgz_A | 353 | Uncharacterized protein YNCE; beta-propeller, prot | 99.34 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.33 | |
| 2ojh_A | 297 | Uncharacterized protein ATU1656/AGR_C_3050; TOLB, | 99.33 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.33 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.33 | |
| 1xfd_A | 723 | DIP, dipeptidyl aminopeptidase-like protein 6, dip | 99.31 | |
| 3u4y_A | 331 | Uncharacterized protein; structural genomics, PSI- | 99.3 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.28 | |
| 1ri6_A | 343 | Putative isomerase YBHE; 7-bladed propeller, enzym | 99.27 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.24 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.24 | |
| 1jmx_B | 349 | Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; | 99.22 | |
| 2ecf_A | 741 | Dipeptidyl peptidase IV; prolyl oligopeptidase fam | 99.21 | |
| 1pby_B | 337 | Quinohemoprotein amine dehydrogenase 40 kDa subuni | 99.2 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 99.2 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.2 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 99.16 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.15 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 99.15 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.14 | |
| 2z3z_A | 706 | Dipeptidyl aminopeptidase IV; peptidase family S9, | 99.14 | |
| 3o4h_A | 582 | Acylamino-acid-releasing enzyme; alpha/beta hydrol | 99.12 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.12 | |
| 1k32_A | 1045 | Tricorn protease; protein degradation, substrate g | 99.11 | |
| 3hfq_A | 347 | Uncharacterized protein LP_2219; Q88V64_lacpl, NES | 99.1 | |
| 1z68_A | 719 | Fibroblast activation protein, alpha subunit; sepr | 99.1 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.09 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 99.02 | |
| 3fvz_A | 329 | Peptidyl-glycine alpha-amidating monooxygenase; be | 99.01 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 99.0 | |
| 3scy_A | 361 | Hypothetical bacterial 6-phosphogluconolactonase; | 98.99 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.95 | |
| 4a5s_A | 740 | Dipeptidyl peptidase 4 soluble form; hydrolase, ty | 98.93 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.92 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.91 | |
| 1q7f_A | 286 | NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL | 98.88 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.86 | |
| 1xip_A | 388 | Nucleoporin NUP159; beta-propeller, transport prot | 98.79 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.77 | |
| 3pe7_A | 388 | Oligogalacturonate lyase; seven-bladed beta-propel | 98.77 | |
| 1jof_A | 365 | Carboxy-CIS,CIS-muconate cyclase; beta-propeller, | 98.77 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.71 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.66 | |
| 3azo_A | 662 | Aminopeptidase; POP family, hydrolase; 2.00A {Stre | 98.66 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.6 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.56 | |
| 2dg1_A | 333 | DRP35, lactonase; beta propeller, hydrolase; 1.72A | 98.56 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.55 | |
| 3dsm_A | 328 | Uncharacterized protein bacuni_02894; seven_blated | 98.55 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.48 | |
| 3no2_A | 276 | Uncharacterized protein; six-bladed beta-propeller | 98.47 | |
| 3e5z_A | 296 | Putative gluconolactonase; X-RAY NESG Q9RXN3 gluco | 98.46 | |
| 3c5m_A | 396 | Oligogalacturonate lyase; blade-shaped beta-propel | 98.45 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.44 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 98.41 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 98.4 | |
| 2xdw_A | 710 | Prolyl endopeptidase; alpha/beta-hydrolase, amnesi | 98.38 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.32 | |
| 1rwi_B | 270 | Serine/threonine-protein kinase PKND; beta propell | 98.31 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.27 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.27 | |
| 2z2n_A | 299 | Virginiamycin B lyase; seven-bladed beta-propeller | 98.27 | |
| 2oiz_A | 361 | Aromatic amine dehydrogenase, large subunit; oxido | 98.23 | |
| 1pjx_A | 314 | Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotries | 98.15 | |
| 2gop_A | 347 | Trilobed protease; beta propeller, open velcro, hy | 98.13 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 98.13 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 98.13 | |
| 1yr2_A | 741 | Prolyl oligopeptidase; prolyl endopeptidase, mecha | 98.11 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.05 | |
| 2hz6_A | 369 | Endoplasmic reticulum to nucleus signalling 1 isof | 98.04 | |
| 2bkl_A | 695 | Prolyl endopeptidase; mechanistic study, celiac sp | 98.02 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 98.01 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 98.0 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 98.0 | |
| 2qc5_A | 300 | Streptogramin B lactonase; beta propeller, lyase; | 97.97 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.97 | |
| 2iwa_A | 266 | Glutamine cyclotransferase; pyroglutamate, acyltra | 97.97 | |
| 1qks_A | 567 | Cytochrome CD1 nitrite reductase; enzyme, oxidored | 97.96 | |
| 3g4e_A | 297 | Regucalcin; six bladed beta-propeller, gluconolcat | 97.88 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.86 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.84 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.83 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.83 | |
| 2qe8_A | 343 | Uncharacterized protein; structural genomics, join | 97.82 | |
| 3nok_A | 268 | Glutaminyl cyclase; beta-propeller, cyclotransfera | 97.8 | |
| 2ghs_A | 326 | AGR_C_1268P; regucalcin, structural genomics, join | 97.79 | |
| 3hrp_A | 409 | Uncharacterized protein; NP_812590.1, structural g | 97.77 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 97.75 | |
| 3dr2_A | 305 | Exported gluconolactonase; gluconolactonase SMP-30 | 97.7 | |
| 3nol_A | 262 | Glutamine cyclotransferase; beta-propeller, glutam | 97.68 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.65 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 97.62 | |
| 2mad_H | 373 | Methylamine dehydrogenase (heavy subunit); oxidore | 97.59 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 97.42 | |
| 3mbr_X | 243 | Glutamine cyclotransferase; beta-propeller; 1.44A | 97.38 | |
| 3sjl_D | 386 | Methylamine dehydrogenase heavy chain; MAUG, C-hem | 97.34 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 97.32 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.17 | |
| 3q7m_A | 376 | Lipoprotein YFGL, BAMB; beta-propeller, BAM comple | 97.16 | |
| 3iuj_A | 693 | Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas | 97.14 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 97.12 | |
| 3c75_H | 426 | MADH, methylamine dehydrogenase heavy chain; coppe | 97.1 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 97.05 | |
| 1yiq_A | 689 | Quinohemoprotein alcohol dehydrogenase; electron t | 97.02 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 96.95 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 96.9 | |
| 1fwx_A | 595 | Nitrous oxide reductase; beta-propeller domain, cu | 96.88 | |
| 3hxj_A | 330 | Pyrrolo-quinoline quinone; all beta protein. incom | 96.8 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 96.71 | |
| 1kb0_A | 677 | Quinohemoprotein alcohol dehydrogenase; beta-prope | 96.53 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 96.43 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 96.15 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 96.12 | |
| 2ece_A | 462 | 462AA long hypothetical selenium-binding protein; | 96.07 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 95.47 | |
| 1mda_H | 368 | Methylamine dehydrogenase (heavy subunit); electro | 95.39 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 95.24 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 95.23 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 95.06 | |
| 4a2l_A | 795 | BT_4663, two-component system sensor histidine kin | 94.97 | |
| 1npe_A | 267 | Nidogen, entactin; glycoprotein, basement membrane | 94.87 | |
| 2ad6_A | 571 | Methanol dehydrogenase subunit 1; PQQ configuratio | 94.69 | |
| 1kv9_A | 668 | Type II quinohemoprotein alcohol dehydrogenase; el | 94.62 | |
| 3amr_A | 355 | 3-phytase; beta-propeller, phytate, MYO-inositol h | 94.22 | |
| 1k3i_A | 656 | Galactose oxidase precursor; blade beta propeller, | 93.85 | |
| 1flg_A | 582 | Protein (quinoprotein ethanol dehydrogenase); supe | 93.56 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 93.5 | |
| 2fp8_A | 322 | Strictosidine synthase; six bladed beta propeller | 92.38 | |
| 3tc9_A | 430 | Hypothetical hydrolase; 6-bladed beta-propeller, i | 92.03 | |
| 3pbp_A | 452 | Nucleoporin NUP82; beta-propeller, mRNA export, mR | 91.6 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 91.46 | |
| 3v64_C | 349 | Agrin; beta propeller, laminin-G, signaling, prote | 90.88 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 90.68 | |
| 2xe4_A | 751 | Oligopeptidase B; hydrolase-inhibitor complex, hyd | 90.46 | |
| 3v9f_A | 781 | Two-component system sensor histidine kinase/RESP | 90.19 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 90.17 | |
| 3v65_B | 386 | Low-density lipoprotein receptor-related protein; | 89.85 | |
| 1w6s_A | 599 | Methanol dehydrogenase subunit 1; anisotropic, ele | 89.25 | |
| 3ei3_A | 1158 | DNA damage-binding protein 1; UV-damage, DDB, nucl | 89.24 | |
| 2xzh_A | 365 | Clathrin heavy chain 1; endocytosis, endocytosis i | 88.02 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 87.45 | |
| 2xbg_A | 327 | YCF48-like protein; photosynthesis, photosystem II | 87.42 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 87.32 | |
| 4gq2_M | 950 | Nucleoporin NUP120; beta propeller alpha helical, | 86.96 | |
| 3kya_A | 496 | Putative phosphatase; structural genomics, joint c | 86.4 | |
| 2p4o_A | 306 | Hypothetical protein; putative lactonase, structur | 85.47 | |
| 1bpo_A | 494 | Protein (clathrin); clathrin endocytosis beta-prop | 84.05 | |
| 4hw6_A | 433 | Hypothetical protein, IPT/TIG domain protein; puta | 80.63 | |
| 3m0c_C | 791 | LDL receptor, low-density lipoprotein receptor; pr | 80.16 |
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.94 E-value=2.9e-25 Score=173.95 Aligned_cols=148 Identities=13% Similarity=0.174 Sum_probs=124.7
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG 74 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg 74 (161)
|++.+++ ..+. ..|.+++|+||+.++++++. ||+|+|||+.+++++..+++|..+|.+++ +|++|+.|+
T Consensus 3 l~~~~~~-~~h~--~~V~~~~fsp~~~~l~s~~~--dg~v~lWd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~s~d~ 77 (304)
T 2ynn_A 3 LDIKKTF-SNRS--DRVKGIDFHPTEPWVLTTLY--SGRVELWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (304)
T ss_dssp CCCEEEE-EEEC--SCEEEEEECSSSSEEEEEET--TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred ceeEEee-cCCC--CceEEEEECCCCCEEEEEcC--CCcEEEEECCCCceeEEeeccCCcEEEEEEeCCCCEEEEECCCC
Confidence 4567788 4444 45999999999999999776 99999999999999999999999999998 899999999
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeE-EEEE-ecCceEEEEECCc---
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEI-CNYS-FSNTILAVKLNRK--- 148 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i-~~l~-~~~~V~~v~~~~~--- 148 (161)
||+||+++++++ ..+.+|... |.+++|+|++..+++++.|++|+|||++++..+ ..+. |...|.+++|+|+
T Consensus 78 ~i~vwd~~~~~~~-~~~~~h~~~--v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~ 154 (304)
T 2ynn_A 78 RIRVFNYNTGEKV-VDFEAHPDY--IRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (304)
T ss_dssp EEEEEETTTCCEE-EEEECCSSC--EEEEEECSSSSEEEEEETTSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTT
T ss_pred EEEEEECCCCcEE-EEEeCCCCc--EEEEEEcCCCCEEEEECCCCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCC
Confidence 999999998866 466788754 778899999988899999999999999988554 4454 6789999999983
Q ss_pred EEEEEecc
Q psy505 149 KEEEEDEE 156 (161)
Q Consensus 149 ~~vv~~~~ 156 (161)
.++....|
T Consensus 155 ~l~sgs~D 162 (304)
T 2ynn_A 155 TFASGCLD 162 (304)
T ss_dssp EEEEEETT
T ss_pred EEEEEeCC
Confidence 56666555
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=1.1e-24 Score=172.67 Aligned_cols=137 Identities=18% Similarity=0.260 Sum_probs=121.5
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
..+.+++++|||.++|+++. ||.|++||+++++++.++++|..+|++++ +|++|+.|| |+|||+++++..
T Consensus 165 ~~v~~~~~spdg~~lasg~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~- 241 (321)
T 3ow8_A 165 KFILSIAYSPDGKYLASGAI--DGIINIFDIATGKLLHTLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLA- 241 (321)
T ss_dssp SCEEEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEE-
T ss_pred ceEEEEEECCCCCEEEEEcC--CCeEEEEECCCCcEEEEEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCccee-
Confidence 45889999999999999776 99999999999999999999999999999 899999999 999999987755
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
..+.+|.. .+.+++|+|++..+++++.|++|+|||+++++++..+. |.+.|++++|+|+ .++.+..+
T Consensus 242 ~~~~~h~~--~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~g~~l~s~~~d 311 (321)
T 3ow8_A 242 GTLSGHAS--WVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDHQDQVWGVKYNGNGSKIVSVGDD 311 (321)
T ss_dssp EEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEcCCCC--ceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCCCCcEEEEEECCCCCEEEEEeCC
Confidence 56677865 47789999999889999899999999999999998885 6889999999997 56666665
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.93 E-value=7e-25 Score=176.00 Aligned_cols=141 Identities=11% Similarity=0.052 Sum_probs=114.3
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~ 84 (161)
|...|.+++|+|||.+|++++. ||+|+|||+++++++.++.+|.++|++++ +|++|+.|| |||||+++++
T Consensus 126 H~~~V~~v~~spdg~~l~sgs~--d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~ 203 (344)
T 4gqb_B 126 HDDIVSTVSVLSSGTQAVSGSK--DICIKVWDLAQQVVLSSYRAHAAQVTCVAASPHKDSVFLSCSEDNRILLWDTRCPK 203 (344)
T ss_dssp CSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCCSSCEEEEEECSSCTTEEEEEETTSCEEEEETTSSS
T ss_pred CCCCEEEEEECCCCCEEEEEeC--CCeEEEEECCCCcEEEEEcCcCCceEEEEecCCCCCceeeeccccccccccccccc
Confidence 4556999999999999999776 99999999999999999999999999998 789999999 9999999988
Q ss_pred ceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE---EEEEecc
Q psy505 85 TLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK---EEEEDEE 156 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~---~vv~~~~ 156 (161)
+...+ ..+.+...+.+++|+| +...+++++.|++|+|||+++++++.++. |.+.|.+++|+|++ ++.+..|
T Consensus 204 ~~~~~-~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D 279 (344)
T 4gqb_B 204 PASQI-GCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSAVHSQCVTGLVFSPHSVPFLASLSED 279 (344)
T ss_dssp CEEEC-C----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC--CCEEEECCSSCEEEEEECSSSSCCEEEEETT
T ss_pred eeeee-ecceeeccceeeeecCCCCcceEEeccCCcEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCC
Confidence 76433 2222233477889998 44567777789999999999999999987 67899999999973 4545444
|
| >2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.5e-23 Score=164.26 Aligned_cols=149 Identities=11% Similarity=0.149 Sum_probs=119.2
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-ceeeeeccCccceeee-------eEEEecCCc
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-AKTMIPAHDSPLAALA-------SLSVGTKSG 74 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-~~~~l~~H~~~V~~l~-------~lasgs~dg 74 (161)
++.++ .. ++..|.+++++|++.++++++. ||+|++||++++. +...+.+|..+|.+++ +||+|+.||
T Consensus 89 ~~~~~-~~--h~~~v~~~~~~~~~~~l~sgs~--D~~v~lWd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l~sgs~D~ 163 (304)
T 2ynn_A 89 KVVDF-EA--HPDYIRSIAVHPTKPYVLSGSD--DLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPSTFASGCLDR 163 (304)
T ss_dssp EEEEE-EC--CSSCEEEEEECSSSSEEEEEET--TSCEEEEEGGGTTEEEEEECCCCSCEEEEEECTTCTTEEEEEETTS
T ss_pred EEEEE-eC--CCCcEEEEEEcCCCCEEEEECC--CCeEEEEECCCCcchhhhhcccCCcEEEEEECCCCCCEEEEEeCCC
Confidence 44555 33 4456899999999999998776 9999999999874 5578999999999998 799999999
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE--E
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK--E 150 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~--~ 150 (161)
||+||++++.+...+..+|...+....+...|++..+++++.|++|+|||+++++++..+. |...|.+++|+|+. +
T Consensus 164 ~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 243 (304)
T 2ynn_A 164 TVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQTKSCVATLEGHMSNVSFAVFHPTLPII 243 (304)
T ss_dssp EEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECSSSSEE
T ss_pred eEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCCCccceeeCCCCCCEEEEEECCCCCEE
Confidence 9999998877654555555555444444444577778888899999999999999999987 67899999999984 6
Q ss_pred EEEecc
Q psy505 151 EEEDEE 156 (161)
Q Consensus 151 vv~~~~ 156 (161)
+....|
T Consensus 244 ~s~s~D 249 (304)
T 2ynn_A 244 ISGSED 249 (304)
T ss_dssp EEEETT
T ss_pred EEEcCC
Confidence 665555
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.7e-23 Score=166.22 Aligned_cols=148 Identities=14% Similarity=0.173 Sum_probs=122.6
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-e
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-Y 75 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-i 75 (161)
++.++ .. +...|.+++++|++.++++++. ||+|++||+++++++.++.+|..+|++++ +|++|+.|| |
T Consensus 176 ~~~~~-~~--h~~~v~~~~~~~~~~~l~sg~~--d~~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~d~~v 250 (340)
T 1got_B 176 QTTTF-TG--HTGDVMSLSLAPDTRLFVSGAC--DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATC 250 (340)
T ss_dssp EEEEE-CC--CSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSEEEEEETTSCE
T ss_pred EEEEE-cC--CCCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCeeEEEEcCCcCCEEEEEEcCCCCEEEEEcCCCcE
Confidence 34555 33 4456899999999999998776 99999999999999999999999999998 899999999 9
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEE
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEE 152 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv 152 (161)
++||+++++.+. .+..+.....+.+++|+|++..+++++.|+.|+|||..+++++..+. |.+.|.+++|+|+ .++.
T Consensus 251 ~iwd~~~~~~~~-~~~~~~~~~~v~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s 329 (340)
T 1got_B 251 RLFDLRADQELM-TYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVAT 329 (340)
T ss_dssp EEEETTTTEEEE-EECCTTCCSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred EEEECCCCcEEE-EEccCCcccceEEEEECCCCCEEEEECCCCeEEEEEcccCcEeeEeecCCCcEEEEEEcCCCCEEEE
Confidence 999998876542 33322222247889999999999999999999999999999998886 6889999999998 4666
Q ss_pred Eecc
Q psy505 153 EDEE 156 (161)
Q Consensus 153 ~~~~ 156 (161)
...|
T Consensus 330 ~s~D 333 (340)
T 1got_B 330 GSWD 333 (340)
T ss_dssp EETT
T ss_pred EcCC
Confidence 5555
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=9.1e-24 Score=172.19 Aligned_cols=139 Identities=7% Similarity=0.151 Sum_probs=121.2
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
|...|.+++++|++.++++++. ||+|+|||+.+++.+.++.+|.++|.+++ +|++|+.|| |+|||++++++
T Consensus 107 h~~~V~~~~~~p~~~~l~s~s~--Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~~~~l~sgs~D~~i~iwd~~~~~~ 184 (410)
T 1vyh_C 107 HRSPVTRVIFHPVFSVMVSASE--DATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIKLWDFQGFEC 184 (410)
T ss_dssp CSSCEEEEEECSSSSEEEEEES--SSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCCEEETTSSCE
T ss_pred cCCcEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCcEEEEEeccCCcEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCce
Confidence 4456999999999999999776 99999999999999999999999999998 899999999 99999998776
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+ ..+.+|... |.+++|+|++..+++++.|++|++||+++++++..+. |...|.++.|+|+ .++.+..+
T Consensus 185 ~-~~~~~h~~~--V~~v~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~g~~l~s~s~D 255 (410)
T 1vyh_C 185 I-RTMHGHDHN--VSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIASCSND 255 (410)
T ss_dssp E-ECCCCCSSC--EEEEEECSSSSEEEEEETTSEEEEEETTTCCEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred e-EEEcCCCCC--EEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEeCCCccEEEEEECCCCCEEEEEcCC
Confidence 5 456777654 7788999998888888899999999999999998887 6789999999997 45555544
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=167.47 Aligned_cols=151 Identities=13% Similarity=0.128 Sum_probs=120.6
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG- 74 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg- 74 (161)
++++++ ..+..+....+++++++|.++++++. ||+|++||+++++++..+.+|..+|++++ +|++|+.|+
T Consensus 187 ~~~~~~-~~h~~~v~~~~~~~~~~g~~l~sgs~--Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~ 263 (354)
T 2pbi_B 187 QLLQSF-HGHGADVLCLDLAPSETGNTFVSGGC--DKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDDAT 263 (354)
T ss_dssp CEEEEE-ECCSSCEEEEEECCCSSCCEEEEEET--TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred eEEEEE-cCCCCCeEEEEEEeCCCCCEEEEEeC--CCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCCCe
Confidence 355666 45554433344455557889998776 99999999999999999999999999998 899999999
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEE
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEE 151 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~v 151 (161)
||+||+++++.+ ..+..+.....+.+++|+|++..+++++.|++|+|||+.+++++..+. |.+.|.+++|+|+ .++
T Consensus 264 v~lwd~~~~~~~-~~~~~~~~~~~~~~~~~s~~g~~l~~g~~d~~i~vwd~~~~~~~~~l~~h~~~v~~l~~spdg~~l~ 342 (354)
T 2pbi_B 264 CRLYDLRADREV-AIYSKESIIFGASSVDFSLSGRLLFAGYNDYTINVWDVLKGSRVSILFGHENRVSTLRVSPDGTAFC 342 (354)
T ss_dssp EEEEETTTTEEE-EEECCTTCCSCEEEEEECTTSSEEEEEETTSCEEEEETTTCSEEEEECCCSSCEEEEEECTTSSCEE
T ss_pred EEEEECCCCcEE-EEEcCCCcccceeEEEEeCCCCEEEEEECCCcEEEEECCCCceEEEEECCCCcEEEEEECCCCCEEE
Confidence 999999887544 344444322346788999999989998899999999999999988875 7899999999998 455
Q ss_pred EEecc
Q psy505 152 EEDEE 156 (161)
Q Consensus 152 v~~~~ 156 (161)
....|
T Consensus 343 sgs~D 347 (354)
T 2pbi_B 343 SGSWD 347 (354)
T ss_dssp EEETT
T ss_pred EEcCC
Confidence 55554
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.91 E-value=1.3e-22 Score=158.20 Aligned_cols=146 Identities=15% Similarity=0.192 Sum_probs=123.8
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-e
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-Y 75 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-i 75 (161)
+..++ .. |...|.+++++|+|.++++++. ||.|++||+.+++....+.+|..+|.+++ +|++|+.|| |
T Consensus 15 ~~~~~-~g--h~~~v~~~~~s~~~~~l~s~~~--dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~i 89 (312)
T 4ery_A 15 LKFTL-AG--HTKAVSSVKFSPNGEWLASSSA--DKLIKIWGAYDGKFEKTISGHKLGISDVAWSSDSNLLVSASDDKTL 89 (312)
T ss_dssp EEEEE-CC--CSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred eEEEE-cc--cCCcEEEEEECCCCCEEEEeeC--CCeEEEEeCCCcccchhhccCCCceEEEEEcCCCCEEEEECCCCEE
Confidence 34555 33 4456999999999999999776 99999999999999999999999999998 899999999 9
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEE
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEE 152 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv 152 (161)
++||+++++++ ..+.+|... +.++.|+|++..+++++.|++|++||+++++++..+. +..+|.++.|+|+ .+++
T Consensus 90 ~vwd~~~~~~~-~~~~~~~~~--v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~ 166 (312)
T 4ery_A 90 KIWDVSSGKCL-KTLKGHSNY--VFCCNFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLPAHSDPVSAVHFNRDGSLIVS 166 (312)
T ss_dssp EEEETTTCCEE-EEEECCSSC--EEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEE
T ss_pred EEEECCCCcEE-EEEcCCCCC--EEEEEEcCCCCEEEEEeCCCcEEEEECCCCEEEEEecCCCCcEEEEEEcCCCCEEEE
Confidence 99999998765 466777653 6788899988888888889999999999999988886 5789999999987 4555
Q ss_pred Eecc
Q psy505 153 EDEE 156 (161)
Q Consensus 153 ~~~~ 156 (161)
...+
T Consensus 167 ~~~d 170 (312)
T 4ery_A 167 SSYD 170 (312)
T ss_dssp EETT
T ss_pred EeCC
Confidence 5444
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.91 E-value=1e-22 Score=160.66 Aligned_cols=146 Identities=5% Similarity=0.090 Sum_probs=121.7
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------------eEEEe
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------------SLSVG 70 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------------~lasg 70 (161)
++.++ .. +...|.+++++|++.++++++. ||+|++||++ ++++..+.+|.+.|.++. +|++|
T Consensus 99 ~~~~~-~~--h~~~v~~~~~~~~~~~l~s~s~--D~~i~vwd~~-~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~l~s~ 172 (319)
T 3frx_A 99 TYQRF-VG--HKSDVMSVDIDKKASMIISGSR--DKTIKVWTIK-GQCLATLLGHNDWVSQVRVVPNEKADDDSVTIISA 172 (319)
T ss_dssp EEEEE-EC--CSSCEEEEEECTTSCEEEEEET--TSCEEEEETT-SCEEEEECCCSSCEEEEEECCC------CCEEEEE
T ss_pred eeEEE-cc--CCCcEEEEEEcCCCCEEEEEeC--CCeEEEEECC-CCeEEEEeccCCcEEEEEEccCCCCCCCccEEEEE
Confidence 34455 33 4456899999999999998776 9999999997 578889999999999887 58999
Q ss_pred cCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc-
Q psy505 71 TKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK- 148 (161)
Q Consensus 71 s~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~- 148 (161)
+.|+ |++||+++++.. ..+.+|... +.+++|+|++..+++++.|++|+|||+++++++..+..++.|.+++|+|+
T Consensus 173 ~~d~~i~~wd~~~~~~~-~~~~~h~~~--v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~ 249 (319)
T 3frx_A 173 GNDKMVKAWNLNQFQIE-ADFIGHNSN--INTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTLSAQDEVFSLAFSPNR 249 (319)
T ss_dssp ETTSCEEEEETTTTEEE-EEECCCCSC--EEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEEECCSCEEEEEECSSS
T ss_pred eCCCEEEEEECCcchhh-eeecCCCCc--EEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCcEEEEEEcCCC
Confidence 9999 999999887644 456677654 77889999999999999999999999999999999988899999999998
Q ss_pred -EEEEEeccc
Q psy505 149 -KEEEEDEEE 157 (161)
Q Consensus 149 -~~vv~~~~~ 157 (161)
.++....+.
T Consensus 250 ~~la~~~~~~ 259 (319)
T 3frx_A 250 YWLAAATATG 259 (319)
T ss_dssp SEEEEEETTE
T ss_pred CEEEEEcCCC
Confidence 455554443
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.91 E-value=6.8e-23 Score=162.31 Aligned_cols=149 Identities=9% Similarity=0.181 Sum_probs=113.3
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC-------CCceeeeeccCccceeee------eEEE
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-------LHAKTMIPAHDSPLAALA------SLSV 69 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-------~~~~~~l~~H~~~V~~l~------~las 69 (161)
++.++ ....+...|.+++++|++.+||+++. ||+|+|||+.+ .+++..+.+|.++|.+++ +||+
T Consensus 48 ~~~~~-~~~~h~~~v~~v~~sp~~~~las~s~--D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~g~~las 124 (330)
T 2hes_X 48 LIDVL-DETAHKKAIRSVAWRPHTSLLAAGSF--DSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSNDGYYLAT 124 (330)
T ss_dssp EEEEE-CTTCCCSCEEEEEECTTSSEEEEEET--TSCEEEEEC-------CCCEEEEEEC----CEEEEEECTTSCEEEE
T ss_pred EEEEE-ecCCccCCEEEEEECCCCCEEEEEeC--CCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCCCCEEEE
Confidence 34445 23336667999999999999999776 99999999853 346778999999999998 8999
Q ss_pred ecCCc-eEEEEeCCc-Cc--eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC--CeEEEEE-ecCceEE
Q psy505 70 GTKSG-YRLFSLNSI-DT--LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG--SEICNYS-FSNTILA 142 (161)
Q Consensus 70 gs~dg-iriwd~~~~-~~--~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~--~~i~~l~-~~~~V~~ 142 (161)
|+.|+ |+|||+++. +. ....+.+|.. .|.+++|+|++..+++++.|++|+|||..++ +++..+. |.+.|++
T Consensus 125 ~s~D~~v~iwd~~~~~~~~~~~~~~~~h~~--~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~~h~~~v~~ 202 (330)
T 2hes_X 125 CSRDKSVWIWETDESGEEYECISVLQEHSQ--DVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLNGHEGTVWS 202 (330)
T ss_dssp EETTSCEEEEECCTTCCCCEEEEEECCCSS--CEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEE
T ss_pred EeCCCEEEEEeccCCCCCeEEEEEeccCCC--ceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEccCCCCcEEE
Confidence 99999 999999532 21 2245567765 4778899999988999989999999999877 5677775 6789999
Q ss_pred EEECCc----EEEEEecc
Q psy505 143 VKLNRK----KEEEEDEE 156 (161)
Q Consensus 143 v~~~~~----~~vv~~~~ 156 (161)
++|+|+ .++....|
T Consensus 203 ~~~~~~~~~~~l~s~s~D 220 (330)
T 2hes_X 203 SDFDKTEGVFRLCSGSDD 220 (330)
T ss_dssp EEECCSSSSCEEEEEETT
T ss_pred EEecCCCCeeEEEEEeCC
Confidence 999997 45555554
|
| >2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.2e-22 Score=162.59 Aligned_cols=150 Identities=17% Similarity=0.234 Sum_probs=117.1
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceee---------------------------
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTM--------------------------- 53 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~--------------------------- 53 (161)
|++..++ ..|. ..|.+++++||+.+||+++. ||+|+|||..+++..+.
T Consensus 54 ~~~~~~l-~gH~--~~V~~~~~s~d~~~l~s~s~--Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~g~~lasg~~d~ 128 (354)
T 2pbi_B 54 MKTRRTL-KGHG--NKVLCMDWCKDKRRIVSSSQ--DGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPSGCAIACGGLDN 128 (354)
T ss_dssp CCEEEEE-ECCS--SCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCEEEEEECSSSCCCEEEECTTSSEEEEESTTS
T ss_pred cEEEEEe-cCCC--CeEEEEEECCCCCEEEEEeC--CCeEEEEECCCCCcceEEecCCCCEEEEEECCCCCEEEEeeCCC
Confidence 3456667 4544 45899999999999999776 99999999887765433
Q ss_pred ---------------------eeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeec
Q psy505 54 ---------------------IPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFS 105 (161)
Q Consensus 54 ---------------------l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs 105 (161)
+.+|.+.|.+++ .|++|+.|| |++||+++++++ ..+.+|...+....++++
T Consensus 129 ~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~-~~~~~h~~~v~~~~~~~~ 207 (354)
T 2pbi_B 129 KCSVYPLTFDKNENMAAKKKSVAMHTNYLSACSFTNSDMQILTASGDGTCALWDVESGQLL-QSFHGHGADVLCLDLAPS 207 (354)
T ss_dssp EEEEEECCCCTTCCSGGGCEEEEECSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE-EEEECCSSCEEEEEECCC
T ss_pred CEEEEEEeccccccccccceeeeccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCCCeEE-EEEcCCCCCeEEEEEEeC
Confidence 445777777777 789999999 999999998766 567788766554454445
Q ss_pred CCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 106 SSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 106 ~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+++..+++++.|++|++||+++++++..+. |.+.|.+++|+|+ .++.+..+
T Consensus 208 ~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 261 (354)
T 2pbi_B 208 ETGNTFVSGGCDKKAMVWDMRSGQCVQAFETHESDVNSVRYYPSGDAFASGSDD 261 (354)
T ss_dssp SSCCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCCEEEEEeCCCeEEEEECCCCcEEEEecCCCCCeEEEEEeCCCCEEEEEeCC
Confidence 566677888889999999999999998886 6789999999987 56666554
|
| >4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.91 E-value=2.2e-23 Score=167.20 Aligned_cols=139 Identities=14% Similarity=0.122 Sum_probs=110.7
Q ss_pred cceEEecCCCCCCceeEEeecCCCce-EEEEcCCCCcceEEEEEcCCCCceeeee--ccCccceeee-------eEEEec
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNC-YLAYPGSNSIGEVQIFDADNLHAKTMIP--AHDSPLAALA-------SLSVGT 71 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~-~la~~g~~~dg~v~iWd~~~~~~~~~l~--~H~~~V~~l~-------~lasgs 71 (161)
++++++ ..| ...|.+++++|++. ++++++. ||+|+|||++++++...+. .|...+.+++ +|++|+
T Consensus 160 ~~~~~~-~~h--~~~V~~~~~~~~~~~~l~s~s~--D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~ 234 (344)
T 4gqb_B 160 VVLSSY-RAH--AAQVTCVAASPHKDSVFLSCSE--DNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGD 234 (344)
T ss_dssp EEEEEE-CCC--SSCEEEEEECSSCTTEEEEEET--TSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEE
T ss_pred cEEEEE-cCc--CCceEEEEecCCCCCceeeecc--ccccccccccccceeeeeecceeeccceeeeecCCCCcceEEec
Confidence 456677 444 44588999999875 5666554 9999999999999988874 5666788887 789999
Q ss_pred CCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe-EEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 72 KSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL-VAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 72 ~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~-~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
.|| |+|||+++++++ ..+.+|... |.+++|+|++ ..+++++.|++|+|||.++++++....|.+.|.+++|+|+
T Consensus 235 ~dg~v~~wd~~~~~~~-~~~~~h~~~--v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~~~~~H~~~V~~v~~sp~ 310 (344)
T 4gqb_B 235 ENGTVSLVDTKSTSCV-LSSAVHSQC--VTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELFRSQAHRDFVRDATWSPL 310 (344)
T ss_dssp TTSEEEEEESCC--CC-EEEECCSSC--EEEEEECSSSSCCEEEEETTSCEEEECTTCCEEEEECCCSSCEEEEEECSS
T ss_pred cCCcEEEEECCCCcEE-EEEcCCCCC--EEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEEEEcCCCCCEEEEEEeCC
Confidence 999 999999998876 466788754 7788999987 4678888999999999999987765568899999999997
|
| >1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.90 E-value=7.3e-23 Score=166.83 Aligned_cols=138 Identities=7% Similarity=0.120 Sum_probs=120.4
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-e
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-Y 75 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-i 75 (161)
+++++ .. +...|.+++++|+|.++++++. ||+|+|||+.+++++.++.+|.++|.+++ +|++|+.|+ |
T Consensus 142 ~~~~l-~~--h~~~V~~v~~~~~~~~l~sgs~--D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~~~~l~s~s~D~~i 216 (410)
T 1vyh_C 142 FERTL-KG--HTDSVQDISFDHSGKLLASCSA--DMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTI 216 (410)
T ss_dssp CCEEE-CC--CSSCEEEEEECTTSSEEEEEET--TSCCCEEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred EEEEE-ec--cCCcEEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeE
Confidence 45566 34 3456899999999999999776 99999999999999999999999999998 899999999 9
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
++||++++.++ ..+.+|... +..+.|+|++..+++++.|++|++||++++++...+. |...|.++.|+|+
T Consensus 217 ~~wd~~~~~~~-~~~~~h~~~--v~~~~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~~h~~~v~~~~~~~~ 287 (410)
T 1vyh_C 217 KMWEVQTGYCV-KTFTGHREW--VRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAELREHRHVVECISWAPE 287 (410)
T ss_dssp EEEETTTCCEE-EEEECCSSC--EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCS
T ss_pred EEEECCCCcEE-EEEeCCCcc--EEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeEecCCCceEEEEEEcCc
Confidence 99999998866 566788754 6778899999889998899999999999999988885 6789999999985
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-23 Score=165.47 Aligned_cols=139 Identities=17% Similarity=0.152 Sum_probs=108.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee---------------------------
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------------------------- 65 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------------------------- 65 (161)
+...|.+++++|||.+|++++. ||+|++||+++++++..+++|.++|++++
T Consensus 138 h~~~V~~v~~spdg~~l~sgs~--dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~ 215 (357)
T 4g56_B 138 HDDIVKTLSVFSDGTQAVSGGK--DFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFLSCGEDGRILLWDTRKPK 215 (357)
T ss_dssp CSSCEEEEEECSSSSEEEEEET--TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEEEEETTSCEEECCTTSSS
T ss_pred CCCCEEEEEECCCCCEEEEEeC--CCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceeeeeccCCceEEEECCCCc
Confidence 4556999999999999998776 99999999999999999999999998876
Q ss_pred -------------------------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe-EEEEecCCCC
Q psy505 66 -------------------------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL-VAVVSLSSPR 118 (161)
Q Consensus 66 -------------------------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~-~~~~s~~~d~ 118 (161)
+||+|+.|+ |++||+++++++ ..+.+|.. .|.+++|+|++ ..+++++.|+
T Consensus 216 ~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~~~~~-~~~~~~~~--~v~~l~~sp~~~~~lasgs~D~ 292 (357)
T 4g56_B 216 PATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKNPDSA-QTSAVHSQ--NITGLAYSYHSSPFLASISEDC 292 (357)
T ss_dssp CBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSCGGGC-EEECCCSS--CEEEEEECSSSSCCEEEEETTS
T ss_pred eeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCCCcEe-EEEeccce--eEEEEEEcCCCCCEEEEEeCCC
Confidence 344445555 555555444433 23344443 46788999876 5677888899
Q ss_pred eEEEEecCCCCeEEEEEecCceEEEEECC-c--EEEEEecc
Q psy505 119 KLTVCHFKRGSEICNYSFSNTILAVKLNR-K--KEEEEDEE 156 (161)
Q Consensus 119 ~i~iWD~~~~~~i~~l~~~~~V~~v~~~~-~--~~vv~~~~ 156 (161)
+|+|||+++++++..+.|.+.|.+|+|+| + .++.+..|
T Consensus 293 ~i~iwd~~~~~~~~~~~H~~~V~~vafsP~d~~~l~s~s~D 333 (357)
T 4g56_B 293 TVAVLDADFSEVFRDLSHRDFVTGVAWSPLDHSKFTTVGWD 333 (357)
T ss_dssp CEEEECTTSCEEEEECCCSSCEEEEEECSSSTTEEEEEETT
T ss_pred EEEEEECCCCcEeEECCCCCCEEEEEEeCCCCCEEEEEcCC
Confidence 99999999999988888999999999998 3 56666554
|
| >3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.90 E-value=2.1e-22 Score=159.48 Aligned_cols=137 Identities=18% Similarity=0.234 Sum_probs=119.4
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
..+.+++++||+.++++++. ||.|++||+++++....+..|...|.+++ +||+|+.|| |++||+++++.+
T Consensus 123 ~~~~~~~~spdg~~l~~g~~--dg~v~i~~~~~~~~~~~~~~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~~~~~- 199 (321)
T 3ow8_A 123 VDAWTLAFSPDSQYLATGTH--VGKVNIFGVESGKKEYSLDTRGKFILSIAYSPDGKYLASGAIDGIINIFDIATGKLL- 199 (321)
T ss_dssp TCCCCEEECTTSSEEEEECT--TSEEEEEETTTCSEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE-
T ss_pred ccEEEEEECCCCCEEEEEcC--CCcEEEEEcCCCceeEEecCCCceEEEEEECCCCCEEEEEcCCCeEEEEECCCCcEE-
Confidence 34667888999999999776 99999999999999999999999999998 899999999 999999998765
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
..+.+|..+ +.+++|+|++..+++++.|++|+|||+++++++..+. |.+.|.+++|+|+ .++....+
T Consensus 200 ~~~~~h~~~--v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~D 269 (321)
T 3ow8_A 200 HTLEGHAMP--IRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLSGHASWVLNVAFCPDDTHFVSSSSD 269 (321)
T ss_dssp EEECCCSSC--CCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEcccCCc--eeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEcCCCCceEEEEECCCCCEEEEEeCC
Confidence 456777654 6788999999999999999999999999999988886 6789999999997 56655554
|
| >3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-22 Score=156.91 Aligned_cols=144 Identities=7% Similarity=0.140 Sum_probs=117.4
Q ss_pred eEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eE
Q psy505 4 LHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YR 76 (161)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-ir 76 (161)
+.++ .. |...|.+++++|||.++++++. ||+|+|||+.+++++..+.+|.++|.+++ +|++|+.|+ ||
T Consensus 58 ~~~~-~~--h~~~v~~~~~s~dg~~l~s~s~--D~~v~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~D~~i~ 132 (319)
T 3frx_A 58 VRSF-KG--HSHIVQDCTLTADGAYALSASW--DKTLRLWDVATGETYQRFVGHKSDVMSVDIDKKASMIISGSRDKTIK 132 (319)
T ss_dssp EEEE-EC--CSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSCEEEEEETTSCEE
T ss_pred ceEE-eC--CcccEEEEEECCCCCEEEEEeC--CCEEEEEECCCCCeeEEEccCCCcEEEEEEcCCCCEEEEEeCCCeEE
Confidence 4445 33 3445888899999999999776 99999999999999999999999999998 899999999 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCe------EEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc-
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSL------VAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK- 148 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~------~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~- 148 (161)
+||++. +++ ..+.+|... +.++.|+|+. ..+++++.|++|++||++++++...+. |.+.|.+++|+|+
T Consensus 133 vwd~~~-~~~-~~~~~h~~~--v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~sp~g 208 (319)
T 3frx_A 133 VWTIKG-QCL-ATLLGHNDW--VSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEADFIGHNSNINTLTASPDG 208 (319)
T ss_dssp EEETTS-CEE-EEECCCSSC--EEEEEECCC------CCEEEEEETTSCEEEEETTTTEEEEEECCCCSCEEEEEECTTS
T ss_pred EEECCC-CeE-EEEeccCCc--EEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCcchhheeecCCCCcEEEEEEcCCC
Confidence 999964 444 455677654 6677888753 367788889999999999999888775 6889999999998
Q ss_pred -EEEEEecc
Q psy505 149 -KEEEEDEE 156 (161)
Q Consensus 149 -~~vv~~~~ 156 (161)
.++....+
T Consensus 209 ~~l~s~~~d 217 (319)
T 3frx_A 209 TLIASAGKD 217 (319)
T ss_dssp SEEEEEETT
T ss_pred CEEEEEeCC
Confidence 45555554
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.90 E-value=3.3e-22 Score=156.05 Aligned_cols=133 Identities=11% Similarity=0.079 Sum_probs=107.3
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC--CCceeeeeccCccceeee--------eEEEecCCc-eEEEEe
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN--LHAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~--~~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd~ 80 (161)
.|...|.+++|+|||.+||+++. ||+|+|||+.+ ++++.+|.+|.++|++++ +||+|+.|| |||||+
T Consensus 7 ~h~~~V~~~~~s~~g~~las~s~--D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~ 84 (297)
T 2pm7_B 7 AHNEMIHDAVMDYYGKRMATCSS--DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKE 84 (297)
T ss_dssp SCSSCEEEEEECTTSSEEEEEET--TSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEB
T ss_pred CCcCceEEEEECCCCCEEEEEeC--CCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEc
Confidence 35557999999999999999776 99999999975 367899999999999986 799999999 999999
Q ss_pred CCcCc-eeeEEeecCcceEEEEEeecCC--eEEEEecCCCCeEEEEecCCCCe--EEEEE-ecCceEEEEECCc
Q psy505 81 NSIDT-LEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTVCHFKRGSE--ICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 81 ~~~~~-~~~~~~~~~~~~~v~~~~fs~~--~~~~~s~~~d~~i~iWD~~~~~~--i~~l~-~~~~V~~v~~~~~ 148 (161)
++++. ....+.+|.. .+.+++|+|+ +..+++++.|++|++||++++.. ...+. |...|.+++|+|+
T Consensus 85 ~~~~~~~~~~~~~h~~--~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~h~~~v~~~~~~p~ 156 (297)
T 2pm7_B 85 ENGRWSQIAVHAVHSA--SVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAPA 156 (297)
T ss_dssp SSSCBCCCEEECCCSS--CEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEECCSSCEEEEEECCC
T ss_pred CCCceEEEEEeecCCC--ceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeeecccCccceEeecCC
Confidence 88742 1134556764 4778889986 66677777899999999987642 23333 6789999999996
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=2.8e-22 Score=159.65 Aligned_cols=149 Identities=13% Similarity=0.138 Sum_probs=117.7
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCce--ee-eeccCccceeee------eEEEecC
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAK--TM-IPAHDSPLAALA------SLSVGTK 72 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~--~~-l~~H~~~V~~l~------~lasgs~ 72 (161)
++++++ ..|+. ..+.+++++|||.+||+++. ||+|+|||+.+++.. .. ..+|..+|++++ +||+|+.
T Consensus 6 ~~~~~~-~~h~~-~~v~~l~~sp~g~~las~~~--D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 6 VLLGRV-PAHPD-SRCWFLAWNPAGTLLASCGG--DRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEEEEE-CCSTT-SCEEEEEECTTSSCEEEEET--TSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeeee-cCCCC-CcEEEEEECCCCCEEEEEcC--CCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCCCCEEEEEEC
Confidence 678888 55443 25889999999999999876 999999999987633 22 368999999999 8999999
Q ss_pred Cc-eEEEEeCCcCc-eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCe---EEEEE-ecCceEEEEEC
Q psy505 73 SG-YRLFSLNSIDT-LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE---ICNYS-FSNTILAVKLN 146 (161)
Q Consensus 73 dg-iriwd~~~~~~-~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~---i~~l~-~~~~V~~v~~~ 146 (161)
|+ ++|||..+++. ....+.+|... |.+++|+|++..+++++.|++|+|||+.+++. +..+. |...|.+++|+
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~~h~~~--v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~ 159 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLEGHENE--VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHVVWH 159 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEECCCSSC--EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEECCCCSCEEEEEEC
T ss_pred CCcEEEEEccCCCeEEEEEccCCCCC--ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEecCcCCCeEEEEEC
Confidence 99 99999987642 22456778654 77889999998899998999999999988753 34443 56889999999
Q ss_pred Cc--EEEEEecc
Q psy505 147 RK--KEEEEDEE 156 (161)
Q Consensus 147 ~~--~~vv~~~~ 156 (161)
|+ .++....+
T Consensus 160 p~~~~l~s~s~d 171 (345)
T 3fm0_A 160 PSQELLASASYD 171 (345)
T ss_dssp SSSSCEEEEETT
T ss_pred CCCCEEEEEeCC
Confidence 97 45555544
|
| >1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.7e-21 Score=154.70 Aligned_cols=147 Identities=12% Similarity=0.172 Sum_probs=119.3
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG- 74 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg- 74 (161)
+..+++ ..| ...|.+++++||+.++++++. ||+|+|||+.+++.+..+..|...|.+++ +|++|+.|+
T Consensus 46 ~~~~~l-~gH--~~~v~~~~~s~d~~~l~s~s~--Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d~~ 120 (340)
T 1got_B 46 RTRRTL-RGH--LAKIYAMHWGTDSRLLLSASQ--DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDNI 120 (340)
T ss_dssp CEEEEE-CCC--SSCEEEEEECTTSSEEEEEET--TTEEEEEETTTCCEEEEEECSSSCEEEEEECTTSSEEEEEETTCE
T ss_pred hhheee-cCC--CCceEEEEECCCCCEEEEEeC--CCcEEEEECCCCCcceEeecCCccEEEEEECCCCCEEEEEeCCCe
Confidence 455666 444 446999999999999999776 99999999999999999999999999998 899999999
Q ss_pred eEEEEeCCcCc---eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--
Q psy505 75 YRLFSLNSIDT---LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK-- 148 (161)
Q Consensus 75 iriwd~~~~~~---~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~-- 148 (161)
+++||+.+++. +...+.+|.+. +.++.|++++. +++++.|++|++||+++++++..+. |.+.|.+++|+|+
T Consensus 121 v~iw~~~~~~~~~~~~~~~~~h~~~--v~~~~~~~~~~-l~s~s~d~~i~~wd~~~~~~~~~~~~h~~~v~~~~~~~~~~ 197 (340)
T 1got_B 121 CSIYNLKTREGNVRVSRELAGHTGY--LSCCRFLDDNQ-IVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTR 197 (340)
T ss_dssp EEEEETTTCSBSCEEEEEEECCSSC--EEEEEEEETTE-EEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSS
T ss_pred EEEEECccCCCcceeEEEecCCCcc--EEEEEECCCCc-EEEEECCCcEEEEECCCCcEEEEEcCCCCceEEEEECCCCC
Confidence 99999987542 23445677654 66778888776 5566678999999999999998886 6789999999998
Q ss_pred EEEEEecc
Q psy505 149 KEEEEDEE 156 (161)
Q Consensus 149 ~~vv~~~~ 156 (161)
.++....+
T Consensus 198 ~l~sg~~d 205 (340)
T 1got_B 198 LFVSGACD 205 (340)
T ss_dssp EEEEEETT
T ss_pred EEEEEeCC
Confidence 34444433
|
| >4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ... | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-21 Score=151.60 Aligned_cols=139 Identities=13% Similarity=0.111 Sum_probs=118.5
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+..+|.+++++|++.++++++. ||.|++||+.+++++..+.+|...|.+++ +|++|+.|| |++||+++++.
T Consensus 64 h~~~v~~~~~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~ 141 (312)
T 4ery_A 64 HKLGISDVAWSSDSNLLVSASD--DKTLKIWDVSSGKCLKTLKGHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKTGKC 141 (312)
T ss_dssp CSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCE
T ss_pred CCCceEEEEEcCCCCEEEEECC--CCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCEE
Confidence 4557999999999999999776 99999999999999999999999999998 899999999 99999999876
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--ecCceEEEEECCc--EEEEEecc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+ ..+.+|... +.+++|+|++..+++++.|+.|++||+++++++..+. +...|..++|+|+ .+++...+
T Consensus 142 ~-~~~~~~~~~--v~~~~~~~~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d 213 (312)
T 4ery_A 142 L-KTLPAHSDP--VSAVHFNRDGSLIVSSSYDGLCRIWDTASGQCLKTLIDDDNPPVSFVKFSPNGKYILAATLD 213 (312)
T ss_dssp E-EEECCCSSC--EEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEECCSSCCCEEEEEECTTSSEEEEEETT
T ss_pred E-EEecCCCCc--EEEEEEcCCCCEEEEEeCCCcEEEEECCCCceeeEEeccCCCceEEEEECCCCCEEEEEcCC
Confidence 5 455666543 7788999998888888889999999999999888774 3568999999997 45555444
|
| >2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.89 E-value=3.4e-22 Score=158.26 Aligned_cols=146 Identities=12% Similarity=0.163 Sum_probs=111.4
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC----CceeeeeccCccceeee------eEEEecC
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL----HAKTMIPAHDSPLAALA------SLSVGTK 72 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~----~~~~~l~~H~~~V~~l~------~lasgs~ 72 (161)
++.++ .. +...|.+++++|+|.+||+++. ||+|+|||+.+. +++..+.+|..+|++++ +|++|+.
T Consensus 99 ~~~~~-~~--h~~~V~~v~~sp~g~~las~s~--D~~v~iwd~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~ 173 (330)
T 2hes_X 99 LLAII-EG--HENEVKGVAWSNDGYYLATCSR--DKSVWIWETDESGEEYECISVLQEHSQDVKHVIWHPSEALLASSSY 173 (330)
T ss_dssp EEEEE-C------CEEEEEECTTSCEEEEEET--TSCEEEEECCTTCCCCEEEEEECCCSSCEEEEEECSSSSEEEEEET
T ss_pred eEEEE-cC--CCCcEEEEEECCCCCEEEEEeC--CCEEEEEeccCCCCCeEEEEEeccCCCceEEEEECCCCCEEEEEcC
Confidence 44555 34 3445899999999999999776 999999999432 46778999999999998 8999999
Q ss_pred Cc-eEEEEeCCc--CceeeEEeecCcceEEEEEeecCC--eEEEEecCCCCeEEEEecCCC--------CeEEEEE--ec
Q psy505 73 SG-YRLFSLNSI--DTLEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTVCHFKRG--------SEICNYS--FS 137 (161)
Q Consensus 73 dg-iriwd~~~~--~~~~~~~~~~~~~~~v~~~~fs~~--~~~~~s~~~d~~i~iWD~~~~--------~~i~~l~--~~ 137 (161)
|+ |||||.+++ +++ ..+.+|... |.+++|+|+ +..+++++.|++|+|||++.+ .++..+. |.
T Consensus 174 D~~i~iW~~~~~~~~~~-~~~~~h~~~--v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~~~h~ 250 (330)
T 2hes_X 174 DDTVRIWKDYDDDWECV-AVLNGHEGT--VWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGDDEDDQQEWVCEAILPDVHK 250 (330)
T ss_dssp TSCEEEEEEETTEEEEE-EEECCCSSC--EEEEEECCSSSSCEEEEEETTSCEEEEEEEEECTTSCEEEEEEEECCSCCS
T ss_pred CCeEEEEECCCCCeeEE-EEccCCCCc--EEEEEecCCCCeeEEEEEeCCCeEEEEEecCCCccccceeEEeeecccccc
Confidence 99 999999765 333 466788754 678889997 677888889999999998765 3333443 56
Q ss_pred CceEEEEECCcE-EEEEecc
Q psy505 138 NTILAVKLNRKK-EEEEDEE 156 (161)
Q Consensus 138 ~~V~~v~~~~~~-~vv~~~~ 156 (161)
..|++++|+++. ++.+..+
T Consensus 251 ~~v~~v~~s~~~~l~s~~~d 270 (330)
T 2hes_X 251 RQVYNVAWGFNGLIASVGAD 270 (330)
T ss_dssp SCEEEEEECTTSCEEEEETT
T ss_pred cceEEEEEcCCCEEEEEeCC
Confidence 799999999874 4444444
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.89 E-value=4.1e-22 Score=158.21 Aligned_cols=139 Identities=13% Similarity=0.126 Sum_probs=111.7
Q ss_pred cceEEecCCCCCCceeEEeec-----CC-CceEEEEcCCCCcceEEEEEcCCC-------CceeeeeccCccceeee---
Q psy505 2 KVLHTIRDTPPNPNGICCLCV-----NS-DNCYLAYPGSNSIGEVQIFDADNL-------HAKTMIPAHDSPLAALA--- 65 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~-----~~-d~~~la~~g~~~dg~v~iWd~~~~-------~~~~~l~~H~~~V~~l~--- 65 (161)
+++.++ .+|.. .|.++++ +| |+.+||+++. ||+|+|||+.++ .+...+.+|..+|++++
T Consensus 12 ~~~~~l-~gH~~--~V~~~~~~~s~~~~~d~~~l~sgs~--D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~ 86 (343)
T 2xzm_R 12 VKRGIL-EGHSD--WVTSIVAGFSQKENEDSPVLISGSR--DKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQ 86 (343)
T ss_dssp EEEEEE-ECCSS--CEEEEEECCCSSTTCCCCEEEEEET--TSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECS
T ss_pred eeeeee-ccchh--hhhheeeEEEeecCCCCCEEEEEcC--CCEEEEEECCcCCcccccccccchhccCCCceEEEEECC
Confidence 456677 55544 5788877 66 8999998776 999999999754 35678899999999998
Q ss_pred ---eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE----Eec
Q psy505 66 ---SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY----SFS 137 (161)
Q Consensus 66 ---~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l----~~~ 137 (161)
++++|+.|+ |||||+++++.+ ..+.+|... |.+++|+|++..+++++.|++|++||+.. ++...+ .+.
T Consensus 87 ~~~~l~s~s~D~~v~lwd~~~~~~~-~~~~~h~~~--v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~~~~~~~~~~~~ 162 (343)
T 2xzm_R 87 ENCFAISSSWDKTLRLWDLRTGTTY-KRFVGHQSE--VYSVAFSPDNRQILSAGAEREIKLWNILG-ECKFSSAEKENHS 162 (343)
T ss_dssp STTEEEEEETTSEEEEEETTSSCEE-EEEECCCSC--EEEEEECSSTTEEEEEETTSCEEEEESSS-CEEEECCTTTSCS
T ss_pred CCCEEEEEcCCCcEEEEECCCCcEE-EEEcCCCCc--EEEEEECCCCCEEEEEcCCCEEEEEeccC-CceeeeecccCCC
Confidence 899999999 999999998766 466788754 77889999988888888999999999984 433333 256
Q ss_pred CceEEEEECCcE
Q psy505 138 NTILAVKLNRKK 149 (161)
Q Consensus 138 ~~V~~v~~~~~~ 149 (161)
..|.+++|+|+.
T Consensus 163 ~~v~~~~~~~~~ 174 (343)
T 2xzm_R 163 DWVSCVRYSPIM 174 (343)
T ss_dssp SCEEEEEECCCC
T ss_pred ceeeeeeecccc
Confidence 789999999963
|
| >2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-21 Score=151.88 Aligned_cols=148 Identities=11% Similarity=0.117 Sum_probs=114.1
Q ss_pred cceEEecCCCCCCceeEEeecCC--CceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee--------eEEE
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNS--DNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA--------SLSV 69 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~--d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~--------~las 69 (161)
+++.++ ..|. ..|.+++|+| +|.+||+++. ||+|+|||+++++ .+..+.+|..+|++++ +|++
T Consensus 44 ~~~~~l-~gH~--~~V~~v~~s~~~~g~~l~s~s~--D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s 118 (297)
T 2pm7_B 44 KLIDTL-TGHE--GPVWRVDWAHPKFGTILASCSY--DGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLV 118 (297)
T ss_dssp CCCEEE-CCCS--SCEEEEEECCGGGCSEEEEEET--TTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEE
T ss_pred EEEEEE-cccc--CCeEEEEecCCCcCCEEEEEcC--CCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEE
Confidence 355666 4444 4588888875 4789998776 9999999999874 6678899999999997 6999
Q ss_pred ecCCc-eEEEEeCCcCce-eeEEeecCcceEEEEEeecCCe-------------EEEEecCCCCeEEEEecCCCC----e
Q psy505 70 GTKSG-YRLFSLNSIDTL-EQIYENSQEDVCIVERLFSSSL-------------VAVVSLSSPRKLTVCHFKRGS----E 130 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~-~~~~~~~~~~~~v~~~~fs~~~-------------~~~~s~~~d~~i~iWD~~~~~----~ 130 (161)
|+.|| |++||++++... ...+.+|.. .+.+++|+|+. ..+++++.|++|+|||+++++ +
T Consensus 119 ~s~d~~v~~wd~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~ 196 (297)
T 2pm7_B 119 ASSDGKVSVVEFKENGTTSPIIIDAHAI--GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVL 196 (297)
T ss_dssp EETTSEEEEEEBCSSSCBCCEEEECCSS--CEEEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEE
T ss_pred EECCCcEEEEEecCCCceeeeeeecccC--ccceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEE
Confidence 99999 999999876322 245567764 47788899863 467778889999999998876 4
Q ss_pred EEEEE-ecCceEEEEECCc-----EEEEEecc
Q psy505 131 ICNYS-FSNTILAVKLNRK-----KEEEEDEE 156 (161)
Q Consensus 131 i~~l~-~~~~V~~v~~~~~-----~~vv~~~~ 156 (161)
+..+. |.+.|.+|+|+|+ .++.+..|
T Consensus 197 ~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D 228 (297)
T 2pm7_B 197 ESTLEGHSDWVRDVAWSPTVLLRSYMASVSQD 228 (297)
T ss_dssp EEEECCCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred EEEecCCCCceEEEEECCCCCCceEEEEEECC
Confidence 45565 6789999999996 35555544
|
| >3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.89 E-value=7.2e-22 Score=157.28 Aligned_cols=141 Identities=9% Similarity=0.146 Sum_probs=115.9
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee------eEEEecCCc-eEEEEeCC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~ 82 (161)
.+...|.+++++|||.+||+++. ||+|+|||+.++. ++..+.+|.++|++++ +|++|+.|+ |++||+++
T Consensus 59 ~h~~~v~~~~~sp~g~~l~s~s~--D~~v~iw~~~~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~ 136 (345)
T 3fm0_A 59 GHQRTVRKVAWSPCGNYLASASF--DATTCIWKKNQDDFECVTTLEGHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDE 136 (345)
T ss_dssp SCSSCEEEEEECTTSSEEEEEET--TSCEEEEEECCC-EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEECT
T ss_pred ccCCcEEEEEECCCCCEEEEEEC--CCcEEEEEccCCCeEEEEEccCCCCCceEEEEeCCCCEEEEEECCCeEEEEECCC
Confidence 45667999999999999999776 9999999998774 6788999999999999 899999999 99999987
Q ss_pred cCce--eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeE--EEEE-ecCceEEEEECCc--EEEEEec
Q psy505 83 IDTL--EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEI--CNYS-FSNTILAVKLNRK--KEEEEDE 155 (161)
Q Consensus 83 ~~~~--~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i--~~l~-~~~~V~~v~~~~~--~~vv~~~ 155 (161)
++.. ...+.+|.. .+.+++|+|++..+++++.|++|++||.++++.. ..+. |.+.|.+++|+|+ .++.+..
T Consensus 137 ~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~~~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~ 214 (345)
T 3fm0_A 137 EDEYECVSVLNSHTQ--DVKHVVWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSD 214 (345)
T ss_dssp TSCEEEEEEECCCCS--CEEEEEECSSSSCEEEEETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred CCCeEEEEEecCcCC--CeEEEEECCCCCEEEEEeCCCcEEEEEecCCCEEEEEEecCCCCceEEEEECCCCCEEEEEeC
Confidence 6532 234556654 3778899999888888889999999999988644 4454 5789999999997 5666655
Q ss_pred c
Q psy505 156 E 156 (161)
Q Consensus 156 ~ 156 (161)
|
T Consensus 215 D 215 (345)
T 3fm0_A 215 D 215 (345)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.88 E-value=8.6e-22 Score=167.96 Aligned_cols=118 Identities=8% Similarity=0.061 Sum_probs=100.8
Q ss_pred CCceeEEeecCCCce-EEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNC-YLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~-~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
+...|.+++|+|++. .+++++. |++|++||..+++++.++.+|.+.|++++ +||+|+.|+ |||||+++++
T Consensus 146 h~~~v~~v~f~p~~~~~l~s~s~--D~~v~lwd~~~~~~~~~l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~ 223 (611)
T 1nr0_A 146 QARAMNSVDFKPSRPFRIISGSD--DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGT 223 (611)
T ss_dssp CSSCEEEEEECSSSSCEEEEEET--TSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCC
T ss_pred CCCCceEEEECCCCCeEEEEEeC--CCeEEEEECCCCeEeeeeccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCc
Confidence 455799999999986 5777665 99999999999999999999999999999 899999999 9999999987
Q ss_pred ceeeEEe------ecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE
Q psy505 85 TLEQIYE------NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY 134 (161)
Q Consensus 85 ~~~~~~~------~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l 134 (161)
+...+.. +|.+ .|.+++|+|++..+++++.|++|+|||+++++++..+
T Consensus 224 ~~~~~~~~~~~~~~h~~--~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~~ 277 (611)
T 1nr0_A 224 KTGVFEDDSLKNVAHSG--SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTI 277 (611)
T ss_dssp EEEECBCTTSSSCSSSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EeeeeccccccccccCC--CEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeeee
Confidence 6533323 6765 4778999999999999999999999999998876544
|
| >1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A | Back alignment and structure |
|---|
Probab=99.88 E-value=9.6e-22 Score=167.66 Aligned_cols=147 Identities=10% Similarity=0.164 Sum_probs=115.2
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc--eee---------------------------
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA--KTM--------------------------- 53 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~--~~~--------------------------- 53 (161)
++.++ .. |...|.+++|+|||.+||+++. ||+|+|||+.+++. ..+
T Consensus 51 ~~~~~-~~--h~~~v~~~~~spdg~~lasg~~--d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~dg~~l~~~~~~~ 125 (611)
T 1nr0_A 51 DTEIY-TE--HSHQTTVAKTSPSGYYCASGDV--HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEGR 125 (611)
T ss_dssp CCEEE-CC--CSSCEEEEEECTTSSEEEEEET--TSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECCS
T ss_pred cCeEe-cC--CCCceEEEEECCCCcEEEEEeC--CCCEEEeECCCCcceeeEeecccCCceEEEEECCCCCEEEEEECCC
Confidence 34455 33 3445889999999999999776 99999999865432 222
Q ss_pred -----------------eeccCccceeee-------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe
Q psy505 54 -----------------IPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL 108 (161)
Q Consensus 54 -----------------l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~ 108 (161)
+.+|..+|++++ .|++|+.|+ |++||.++++.. ..+.+|.. .|.+++|+|++
T Consensus 126 ~~~~~v~~wd~~~~~~~l~gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~-~~l~~H~~--~V~~v~fspdg 202 (611)
T 1nr0_A 126 ERFGHVFLFDTGTSNGNLTGQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFK-STFGEHTK--FVHSVRYNPDG 202 (611)
T ss_dssp SCSEEEEETTTCCBCBCCCCCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEE-EEECCCSS--CEEEEEECTTS
T ss_pred CceeEEEEeeCCCCcceecCCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEe-eeeccccC--ceEEEEECCCC
Confidence 345666677666 489999999 999999887644 56778875 47789999999
Q ss_pred EEEEecCCCCeEEEEecCCCCeEEEE--------EecCceEEEEECCc--EEEEEeccc
Q psy505 109 VAVVSLSSPRKLTVCHFKRGSEICNY--------SFSNTILAVKLNRK--KEEEEDEEE 157 (161)
Q Consensus 109 ~~~~s~~~d~~i~iWD~~~~~~i~~l--------~~~~~V~~v~~~~~--~~vv~~~~~ 157 (161)
..+++++.|++|+|||.++++++..+ .|.+.|.+++|+|+ .++.+..|+
T Consensus 203 ~~las~s~D~~i~lwd~~~g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~ 261 (611)
T 1nr0_A 203 SLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADK 261 (611)
T ss_dssp SEEEEEETTSCEEEEETTTCCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTS
T ss_pred CEEEEEECCCcEEEEECCCCcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCC
Confidence 99999999999999999999998887 36789999999997 566666553
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.88 E-value=2.1e-21 Score=157.05 Aligned_cols=135 Identities=16% Similarity=0.205 Sum_probs=114.1
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
.|.+++++|||.++|+++. ||+|+|||+.+++.+..+.+|..+|.+++ +|++|+.|+ |++||+++++.. .
T Consensus 125 ~v~~v~~s~dg~~l~s~~~--d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~-~ 201 (393)
T 1erj_A 125 YIRSVCFSPDGKFLATGAE--DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCS-L 201 (393)
T ss_dssp BEEEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEE-E
T ss_pred eEEEEEECCCCCEEEEEcC--CCeEEEEECCCCcEEEEEccCCCCEEEEEEcCCCCEEEEecCCCcEEEEECCCCeeE-E
Confidence 4889999999999999776 99999999999999999999999999998 899999999 999999998654 3
Q ss_pred EEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEE--------EecCceEEEEECCc--EEEEEecc
Q psy505 89 IYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNY--------SFSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l--------~~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
.+..+. .+..++|+| ++..+++++.|++|+|||.++++++..+ .|.+.|.+++|+|+ .++....+
T Consensus 202 ~~~~~~---~v~~~~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~d 277 (393)
T 1erj_A 202 TLSIED---GVTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLD 277 (393)
T ss_dssp EEECSS---CEEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEETT
T ss_pred EEEcCC---CcEEEEEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEEEEEECCCCCEEEEEeCC
Confidence 334332 367788998 8888888889999999999999988776 25678999999997 45555544
|
| >2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R | Back alignment and structure |
|---|
Probab=99.88 E-value=4.1e-21 Score=152.45 Aligned_cols=138 Identities=10% Similarity=0.133 Sum_probs=109.9
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+...|.+++++|++.++++++. ||+|+|||+++++++..+.+|.++|.+++ +|++|+.|+ |++||+.. +.
T Consensus 75 h~~~V~~~~~~~~~~~l~s~s~--D~~v~lwd~~~~~~~~~~~~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~-~~ 151 (343)
T 2xzm_R 75 HNHFVSDLALSQENCFAISSSW--DKTLRLWDLRTGTTYKRFVGHQSEVYSVAFSPDNRQILSAGAEREIKLWNILG-EC 151 (343)
T ss_dssp CSSCEEEEEECSSTTEEEEEET--TSEEEEEETTSSCEEEEEECCCSCEEEEEECSSTTEEEEEETTSCEEEEESSS-CE
T ss_pred CCCceEEEEECCCCCEEEEEcC--CCcEEEEECCCCcEEEEEcCCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccC-Cc
Confidence 4456899999999999998776 99999999999999999999999999999 899999999 99999974 32
Q ss_pred eeeEE--eecCcceEEEEEeecCCe----------EEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EE
Q psy505 86 LEQIY--ENSQEDVCIVERLFSSSL----------VAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KE 150 (161)
Q Consensus 86 ~~~~~--~~~~~~~~v~~~~fs~~~----------~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~ 150 (161)
..... .+|.. .+.++.|+|++ ..+++++.|++|++|| .++++...+. |...|.+++|+|+ .+
T Consensus 152 ~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd-~~~~~~~~~~~h~~~v~~~~~s~~g~~l 228 (343)
T 2xzm_R 152 KFSSAEKENHSD--WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWN-TNFQIRYTFKAHESNVNHLSISPNGKYI 228 (343)
T ss_dssp EEECCTTTSCSS--CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEE-TTTEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred eeeeecccCCCc--eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEc-CCCceeEEEcCccccceEEEECCCCCEE
Confidence 21111 14443 47788899875 4677777899999999 4556666665 6789999999998 46
Q ss_pred EEEecc
Q psy505 151 EEEDEE 156 (161)
Q Consensus 151 vv~~~~ 156 (161)
+....+
T Consensus 229 ~sgs~d 234 (343)
T 2xzm_R 229 ATGGKD 234 (343)
T ss_dssp EEEETT
T ss_pred EEEcCC
Confidence 655554
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=156.10 Aligned_cols=147 Identities=12% Similarity=0.170 Sum_probs=109.0
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceee-----------------
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAAL----------------- 64 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l----------------- 64 (161)
++.+++ .+|. ..|.+++++|++.+|++++. ||+|+|||+.+++++..+.+|...|.++
T Consensus 57 ~~~~~l-~gH~--~~V~~~~~sp~~~~l~s~s~--D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~ 131 (380)
T 3iz6_a 57 VCCRTL-QGHS--GKVYSLDWTPEKNWIVSASQ--DGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSA 131 (380)
T ss_dssp EEEEEE-CCCS--SCEEEEEECTTSSCEEEEET--TSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSC
T ss_pred EEeecc-cccc--cEEEEEEEcCCCCEEEEEeC--CCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCc
Confidence 456677 5544 45999999999999999776 9999999999888777766665555433
Q ss_pred --------------------------------e-------eEEEecCCc-eEEEEeCCcCceeeEE-----eecCcceEE
Q psy505 65 --------------------------------A-------SLSVGTKSG-YRLFSLNSIDTLEQIY-----ENSQEDVCI 99 (161)
Q Consensus 65 --------------------------------~-------~lasgs~dg-iriwd~~~~~~~~~~~-----~~~~~~~~v 99 (161)
. .|++|+.|+ |++||+++++.+. .+ .+|.. .+
T Consensus 132 v~iw~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~-~~~~~~~~~h~~--~v 208 (380)
T 3iz6_a 132 CSIFNLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRIS-IFGSEFPSGHTA--DV 208 (380)
T ss_dssp CEEEECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEE-EECCCSSSSCCS--CE
T ss_pred EEEEECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEE-EeecccCCCCcc--Ce
Confidence 3 477777777 7788777776542 33 34543 46
Q ss_pred EEEeecC-CeEEEEecCCCCeEEEEecC-CCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 100 VERLFSS-SLVAVVSLSSPRKLTVCHFK-RGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 100 ~~~~fs~-~~~~~~s~~~d~~i~iWD~~-~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
.++.|+| ++..+++++.|++|+|||++ .++++..+. |.+.|.+++|+|+ .++....|
T Consensus 209 ~~~~~~~~~~~~l~sgs~D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D 270 (380)
T 3iz6_a 209 LSLSINSLNANMFISGSCDTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDD 270 (380)
T ss_dssp EEEEECSSSCCEEEEEETTSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSS
T ss_pred EEEEeecCCCCEEEEEECCCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCC
Confidence 7778875 66778888889999999998 457777775 6789999999997 55555554
|
| >3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} | Back alignment and structure |
|---|
Probab=99.87 E-value=2.1e-21 Score=156.46 Aligned_cols=141 Identities=16% Similarity=0.193 Sum_probs=115.2
Q ss_pred CCceeEEeecCC-CceEEEEcCCCCcceEEEEEcC-CCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCc
Q psy505 13 NPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDAD-NLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 13 ~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~-~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~ 83 (161)
+...+.+++++| ++.++++++. ||+|++||++ +++++..+.+|.++|++++ +|++|+.|| |||||++++
T Consensus 204 h~~~v~~~~~~~~~~~~l~sgs~--D~~v~~wd~~~~~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~ 281 (380)
T 3iz6_a 204 HTADVLSLSINSLNANMFISGSC--DTTVRLWDLRITSRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTG 281 (380)
T ss_dssp CCSCEEEEEECSSSCCEEEEEET--TSCEEEEETTTTCCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTT
T ss_pred CccCeEEEEeecCCCCEEEEEEC--CCeEEEEECCCCCcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCC
Confidence 455688899876 7888888765 9999999998 5578899999999999998 899999999 999999998
Q ss_pred CceeeEEeecCc-----ceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-----ecCceEEEEECCc--EEE
Q psy505 84 DTLEQIYENSQE-----DVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-----FSNTILAVKLNRK--KEE 151 (161)
Q Consensus 84 ~~~~~~~~~~~~-----~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-----~~~~V~~v~~~~~--~~v 151 (161)
+++ ..+..+.. ...+.+++|+|++..+++++.|+.|+|||..+++++..+. |.+.|.+++|+|+ .++
T Consensus 282 ~~~-~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 360 (380)
T 3iz6_a 282 HQL-QVYNREPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTLLAEMVLNLGTLQNSHEGRISCLGLSSDGSALC 360 (380)
T ss_dssp EEE-EEECCCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETTTCCEEEEECCSCSSCCCCCCEEEECSSSSEEE
T ss_pred cEE-EEecccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECCCCceEEEEecccCCCCCceEEEEECCCCCEEE
Confidence 765 34443321 1125688999999999999999999999999999888772 5689999999998 455
Q ss_pred EEecc
Q psy505 152 EEDEE 156 (161)
Q Consensus 152 v~~~~ 156 (161)
....|
T Consensus 361 sgs~D 365 (380)
T 3iz6_a 361 TGSWD 365 (380)
T ss_dssp EECTT
T ss_pred EeeCC
Confidence 55444
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.87 E-value=6.1e-21 Score=159.32 Aligned_cols=144 Identities=13% Similarity=0.230 Sum_probs=119.8
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-e
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-Y 75 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-i 75 (161)
+++++ .. +...+.+++++||+.++++++. ||+|++||+ +++.+..+.+|..+|++++ +||+|+.|+ |
T Consensus 418 ~~~~~-~~--~~~~v~~~~~s~d~~~l~~~~~--d~~v~~w~~-~~~~~~~~~~~~~~v~~~~~spd~~~las~~~d~~i 491 (577)
T 2ymu_A 418 LLQTL-TG--HSSSVWGVAFSPDDQTIASASD--DKTVKLWNR-NGQLLQTLTGHSSSVRGVAFSPDGQTIASASDDKTV 491 (577)
T ss_dssp EEEEE-EC--CSSCEEEEEECTTSSEEEEEET--TSEEEEEET-TSCEEEEEECCSSCEEEEEECTTSCEEEEEETTSEE
T ss_pred EEEEe-cC--CCCCeEEEEECCCCCEEEEEcC--CCEEEEEEC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEEEeCCCEE
Confidence 34555 33 3446889999999999999776 999999996 5788899999999999998 899999999 9
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEE
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEE 152 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv 152 (161)
+|||. +++.+ ..+.+|... |.+++|+|++..+++++.|++|+|||. +++++..+. |.+.|.+++|+|| .|+.
T Consensus 492 ~iw~~-~~~~~-~~~~~h~~~--v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~~h~~~v~~~~fs~dg~~l~s 566 (577)
T 2ymu_A 492 KLWNR-NGQLL-QTLTGHSSS--VRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIAS 566 (577)
T ss_dssp EEEET-TSCEE-EEEECCSSC--EEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSCEEE
T ss_pred EEEcC-CCCEE-EEEeCCCCC--EEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEcCCCCCEEEEEEcCCCCEEEE
Confidence 99995 56655 566788754 778899999998999889999999995 688888886 7899999999998 5666
Q ss_pred Eeccc
Q psy505 153 EDEEE 157 (161)
Q Consensus 153 ~~~~~ 157 (161)
+..|.
T Consensus 567 ~~~D~ 571 (577)
T 2ymu_A 567 ASSDK 571 (577)
T ss_dssp EETTS
T ss_pred EeCCC
Confidence 66554
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.87 E-value=4.9e-21 Score=149.23 Aligned_cols=149 Identities=13% Similarity=0.090 Sum_probs=107.0
Q ss_pred CcceEEecCCCCCCceeEEeecCCC-ceEEEEcCCCCcceEEEEEcCCCC-----ceeeeeccCccceeee------eEE
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSD-NCYLAYPGSNSIGEVQIFDADNLH-----AKTMIPAHDSPLAALA------SLS 68 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d-~~~la~~g~~~dg~v~iWd~~~~~-----~~~~l~~H~~~V~~l~------~la 68 (161)
|+|..|| ++|. ..|.+++++|+ +.+||++|. ||+|+|||+.+++ +...+++|.++|.+++ +|+
T Consensus 28 ~~l~~tL-~GH~--~~V~~v~~sp~~~~~l~S~s~--D~~i~vWd~~~~~~~~~~~~~~l~~h~~~V~~~~~s~dg~~l~ 102 (340)
T 4aow_A 28 MTLRGTL-KGHN--GWVTQIATTPQFPDMILSASR--DKTIIMWKLTRDETNYGIPQRALRGHSHFVSDVVISSDGQFAL 102 (340)
T ss_dssp EEEEEEE-CCCS--SCEEEEEECTTCTTEEEEEET--TSCEEEEEECCSSSCSEEEEEEECCCSSCEEEEEECTTSSEEE
T ss_pred eEEEEEE-CCcc--CCEEEEEEeCCCCCEEEEEcC--CCeEEEEECCCCCcccceeeEEEeCCCCCEEEEEECCCCCEEE
Confidence 4567788 6654 45999999997 678888775 9999999998764 4677899999999988 677
Q ss_pred EecCCc-eEEEEeCCcCc------------------------------------------eeeEEeecCcceEEEEEeec
Q psy505 69 VGTKSG-YRLFSLNSIDT------------------------------------------LEQIYENSQEDVCIVERLFS 105 (161)
Q Consensus 69 sgs~dg-iriwd~~~~~~------------------------------------------~~~~~~~~~~~~~v~~~~fs 105 (161)
+|+.|| |++|+...+.. ......+|... +..+.|+
T Consensus 103 s~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~~~~~~--v~~~~~~ 180 (340)
T 4aow_A 103 SGSWDGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDESHSEW--VSCVRFS 180 (340)
T ss_dssp EEETTSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSSCSSC--EEEEEEC
T ss_pred EEcccccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEeccccCc--ccceEEc
Confidence 777777 77776543321 11111223333 3344555
Q ss_pred C--CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 106 S--SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 106 ~--~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+ ....+++++.|++|++||.++++++..+. +.++|.+++|+|+ .+++...|
T Consensus 181 ~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D 236 (340)
T 4aow_A 181 PNSSNPIIVSCGWDKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKD 236 (340)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred cCCCCcEEEEEcCCCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCC
Confidence 4 44566777789999999999999988886 6789999999997 45555444
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.87 E-value=4e-22 Score=157.00 Aligned_cols=140 Identities=14% Similarity=0.064 Sum_probs=105.6
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee--------eEEEecC
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA--------SLSVGTK 72 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~--------~lasgs~ 72 (161)
+++++. ..|...|.+++|+|+|.+||+++. ||+|+|||+.+++ ++.++.+|.++|++++ +|+||+.
T Consensus 4 ~~~~~~--~~H~~~V~~v~~s~~g~~lasgs~--D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~ 79 (316)
T 3bg1_A 4 VINTVD--TSHEDMIHDAQMDYYGTRLATCSS--DRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSY 79 (316)
T ss_dssp ------------CCEEEEEECGGGCEEEEEET--TTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEET
T ss_pred eeeeec--ccccCeEEEeeEcCCCCEEEEEeC--CCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEEC
Confidence 455552 245567999999999999999776 9999999998875 5678999999999987 6999999
Q ss_pred Cc-eEEEEeCCcCc-eeeEEeecCcceEEEEEeecCC--eEEEEecCCCCeEEEEecCCCCeEE---EE-EecCceEEEE
Q psy505 73 SG-YRLFSLNSIDT-LEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTVCHFKRGSEIC---NY-SFSNTILAVK 144 (161)
Q Consensus 73 dg-iriwd~~~~~~-~~~~~~~~~~~~~v~~~~fs~~--~~~~~s~~~d~~i~iWD~~~~~~i~---~l-~~~~~V~~v~ 144 (161)
|+ |+|||+++++. ....+.+|... |.+++|+|+ +..+++++.|++|++||++.+.... .+ .|...|.++.
T Consensus 80 D~~v~iWd~~~~~~~~~~~~~~h~~~--V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~~h~~~v~~~~ 157 (316)
T 3bg1_A 80 DRKVIIWREENGTWEKSHEHAGHDSS--VNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIGCNAVS 157 (316)
T ss_dssp TSCEEEECCSSSCCCEEEEECCCSSC--CCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTTSSSSCBCCCE
T ss_pred CCEEEEEECCCCcceEEEEccCCCCc--eEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeeccccCCcceEE
Confidence 99 99999988742 22345567654 678889987 7778888899999999998764321 12 2457899999
Q ss_pred ECCc
Q psy505 145 LNRK 148 (161)
Q Consensus 145 ~~~~ 148 (161)
|+|+
T Consensus 158 ~~~~ 161 (316)
T 3bg1_A 158 WAPA 161 (316)
T ss_dssp ECCC
T ss_pred Eccc
Confidence 9986
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.87 E-value=1.7e-21 Score=164.95 Aligned_cols=139 Identities=15% Similarity=0.126 Sum_probs=111.0
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-ceeeeeccCccceee--e-------eEEEecCCc-eEEEEeCC
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-AKTMIPAHDSPLAAL--A-------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-~~~~l~~H~~~V~~l--~-------~lasgs~dg-iriwd~~~ 82 (161)
...|.+++++|++ .||+++. ||+|++||+++++ +...+.+|.++|++| + +|||||.|| |||||+++
T Consensus 266 ~~~v~sv~~s~~~-~lasgs~--DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~ 342 (524)
T 2j04_B 266 DSLITTFDFLSPT-TVVCGFK--NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKD 342 (524)
T ss_dssp TTCEEEEEESSSS-EEEEEET--TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGG
T ss_pred CCCEEEEEecCCC-eEEEEeC--CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCC
Confidence 3468899998865 6777665 9999999999774 556799999999999 2 789999999 99999998
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE--EEEEecc
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK--EEEEDEE 156 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~--~vv~~~~ 156 (161)
+++. ..+.+|.....+.+++|+|++..+++++.|++|+|||+++++++..+. |.+.|.+|+|+|++ ++....|
T Consensus 343 ~~~~-~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~D 418 (524)
T 2j04_B 343 IATT-KTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLVSRETTITAIGVSRLHPMVLAGSAD 418 (524)
T ss_dssp HHHH-CEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEEECSSCEEEEECCSSCCBCEEEETT
T ss_pred CCcc-cccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeeecCCCceEEEEeCCCCCeEEEEECC
Confidence 7655 355566532235678899988778888889999999999999877764 78999999999984 4444444
|
| >1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.1e-20 Score=152.93 Aligned_cols=138 Identities=15% Similarity=0.256 Sum_probs=114.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCc------------------cceeee------eEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS------------------PLAALA------SLS 68 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~------------------~V~~l~------~la 68 (161)
+...|.+++|+|||.+||++ . |++++|||+.+++.+..+..|.. .|++++ +||
T Consensus 63 h~~~V~~v~fspdg~~la~g-~--~~~v~i~~~~~g~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~v~~v~~s~dg~~l~ 139 (393)
T 1erj_A 63 HTSVVCCVKFSNDGEYLATG-C--NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 139 (393)
T ss_dssp CSSCCCEEEECTTSSEEEEE-C--BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCEEEEEEECCCCCEEEEE-c--CCcEEEEEecCCCEEEEecCccccccccccccccccCCCceeEEEEEECCCCCEEE
Confidence 55568899999999999984 4 78999999999999888877653 378887 899
Q ss_pred EecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECC
Q psy505 69 VGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNR 147 (161)
Q Consensus 69 sgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~ 147 (161)
+|+.|| |+|||+++++.+ ..+.+|... |.+++|+|++..+++++.|++|++||++++++...+.+.+.|.+++|+|
T Consensus 140 s~~~d~~i~iwd~~~~~~~-~~~~~h~~~--v~~~~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~ 216 (393)
T 1erj_A 140 TGAEDRLIRIWDIENRKIV-MILQGHEQD--IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP 216 (393)
T ss_dssp EEETTSCEEEEETTTTEEE-EEECCCSSC--EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred EEcCCCeEEEEECCCCcEE-EEEccCCCC--EEEEEEcCCCCEEEEecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEEC
Confidence 999999 999999987654 567788754 7788999998888888899999999999999988888889999999998
Q ss_pred -c--EEEEEecc
Q psy505 148 -K--KEEEEDEE 156 (161)
Q Consensus 148 -~--~~vv~~~~ 156 (161)
+ .+++...+
T Consensus 217 ~~~~~l~~~s~d 228 (393)
T 1erj_A 217 GDGKYIAAGSLD 228 (393)
T ss_dssp TTCCEEEEEETT
T ss_pred CCCCEEEEEcCC
Confidence 4 45554443
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.86 E-value=2e-20 Score=146.44 Aligned_cols=139 Identities=10% Similarity=0.166 Sum_probs=117.4
Q ss_pred CCCceeEEeecCCC---ceEEEEcCCCCcceEEEEEcCC-CCce-eeeeccCccceeee------eEEEecCCc-eEEEE
Q psy505 12 PNPNGICCLCVNSD---NCYLAYPGSNSIGEVQIFDADN-LHAK-TMIPAHDSPLAALA------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 12 ~~~~~v~~~~~~~d---~~~la~~g~~~dg~v~iWd~~~-~~~~-~~l~~H~~~V~~l~------~lasgs~dg-iriwd 79 (161)
.+...|.+++++|+ |.++++++. ||.|+|||+.+ +..+ ..+.+|.++|.+++ +|++|+.|| |++||
T Consensus 37 ~h~~~v~~~~~~~~~~~g~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~v~iwd 114 (368)
T 3mmy_A 37 SPDDSIGCLSFSPPTLPGNFLIAGSW--ANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDDGSKVFTASCDKTAKMWD 114 (368)
T ss_dssp CCSSCEEEEEECCTTSSSEEEEEEET--TSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTTSSEEEEEETTSEEEEEE
T ss_pred CCCCceEEEEEcCCCCCceEEEEECC--CCcEEEEEcCCCCceeEEEeccccCCEEEEEECcCCCEEEEEcCCCcEEEEE
Confidence 34556999999998 689998776 99999999998 5555 78999999999999 899999999 99999
Q ss_pred eCCcCceeeEEeecCcceEEEEEee--cCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEecc
Q psy505 80 LNSIDTLEQIYENSQEDVCIVERLF--SSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~~f--s~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~~~ 156 (161)
+++++.. . ..+|... +.+++| +|++..+++++.|++|++||+++++++..+..+..+.++.+.++.++++..+
T Consensus 115 ~~~~~~~-~-~~~~~~~--v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 189 (368)
T 3mmy_A 115 LSSNQAI-Q-IAQHDAP--VKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAE 189 (368)
T ss_dssp TTTTEEE-E-EEECSSC--EEEEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGG
T ss_pred cCCCCce-e-eccccCc--eEEEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCC
Confidence 9987654 3 4456654 556667 8999888888889999999999999999999888999999988877777665
|
| >2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme} | Back alignment and structure |
|---|
Probab=99.86 E-value=8.6e-21 Score=158.42 Aligned_cols=137 Identities=12% Similarity=0.156 Sum_probs=113.4
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG- 74 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg- 74 (161)
|..|.| ++|. ..|.+++|+|||.+||+++. ||+|+|||. +++++++|.+|.++|++++ +||+|+.|+
T Consensus 7 ~e~~~L-~GH~--~~V~~~a~spdg~~las~~~--d~~v~iWd~-~~~~~~~l~gh~~~V~~l~fspdg~~las~~~d~~ 80 (577)
T 2ymu_A 7 KERNRL-EAHS--SSVRGVAFSPDGQTIASASD--DKTVKLWNR-NGQLLQTLTGHSSSVWGVAFSPDGQTIASASDDKT 80 (577)
T ss_dssp CEEEEE-CCCS--SCEEEEEECTTSSCEEEEET--TSEEEEECT-TSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSC
T ss_pred EEeeEE-CCCC--CcEEEEEECCCCCEEEEEeC--CCEEEEEEC-CCCEEEEEeCCCCCEEEEEECCCCCEEEEEeCCCE
Confidence 345667 5654 45999999999999999775 999999995 6889999999999999998 899999999
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
|+|||. +++++ ..+.+|.. .|.+++|+|++..+++++.|+.+++||...........+...|..+.++|+
T Consensus 81 i~vWd~-~~~~~-~~~~~~~~--~v~~~~~s~d~~~l~~~~~d~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 150 (577)
T 2ymu_A 81 VKLWNR-NGQLL-QTLTGHSS--SVRGVAFSPDGQTIASASDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPD 150 (577)
T ss_dssp EEEEET-TSCEE-EEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTCCEEEEECCCSSCEEEEEECTT
T ss_pred EEEEEC-CCCEE-EEEECCCC--CEEEEEECCCCCEEEEEcCCCceeecccccceeeeccCCCCceeeeeeecC
Confidence 999996 55655 56677765 477899999999999988999999999875544333346789999999987
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.2e-20 Score=151.95 Aligned_cols=139 Identities=13% Similarity=0.028 Sum_probs=107.5
Q ss_pred eeEEeecCCCceEEEE-cCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCceEEEEeCCcCceee
Q psy505 16 GICCLCVNSDNCYLAY-PGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSGYRLFSLNSIDTLEQ 88 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~-~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dgiriwd~~~~~~~~~ 88 (161)
.+.+++|+|||+++|+ +++. |++|||||+.+++++..+. |.++|.+++ ++++++++++++|+..+++.+..
T Consensus 135 ~~~~v~fSpDg~~la~as~~~-d~~i~iwd~~~~~~~~~~~-~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~ 212 (365)
T 4h5i_A 135 YTKLVYISREGTVAAIASSKV-PAIMRIIDPSDLTEKFEIE-TRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIAR 212 (365)
T ss_dssp CEEEEEECTTSSCEEEEESCS-SCEEEEEETTTTEEEEEEE-CSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEE
T ss_pred CEEEEEEcCCCCEEEEEECCC-CCEEEEeECCCCcEEEEeC-CCCceEEEEEccCCceEEeccceeEEEEEeccCcceee
Confidence 4778889999998764 3443 9999999999999988886 778899998 88999888877777665543211
Q ss_pred -EEeec------------------------------------------------CcceEEEEEeecCCeEEEEecCCCCe
Q psy505 89 -IYENS------------------------------------------------QEDVCIVERLFSSSLVAVVSLSSPRK 119 (161)
Q Consensus 89 -~~~~~------------------------------------------------~~~~~v~~~~fs~~~~~~~s~~~d~~ 119 (161)
...+| .+...|.+++|+|++..+++++.|++
T Consensus 213 ~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~ 292 (365)
T 4h5i_A 213 KTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNS 292 (365)
T ss_dssp ECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSC
T ss_pred eecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCE
Confidence 00111 00113667899999999999999999
Q ss_pred EEEEecCCCCeEEEE-E-ecCceEEEEECCc--EEEEEecc
Q psy505 120 LTVCHFKRGSEICNY-S-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 120 i~iWD~~~~~~i~~l-~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
|+|||+++++++..+ . |..+|.+|+|+|| .|+.+-.|
T Consensus 293 V~iwd~~~~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D 333 (365)
T 4h5i_A 293 IALVKLKDLSMSKIFKQAHSFAITEVTISPDSTYVASVSAA 333 (365)
T ss_dssp EEEEETTTTEEEEEETTSSSSCEEEEEECTTSCEEEEEETT
T ss_pred EEEEECCCCcEEEEecCcccCCEEEEEECCCCCEEEEEeCC
Confidence 999999999999886 3 7899999999998 45555555
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.86 E-value=3.2e-20 Score=149.93 Aligned_cols=132 Identities=13% Similarity=0.157 Sum_probs=116.4
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCcee
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~~ 87 (161)
+...|.+++++|++.++++++. ||.|++||+.+++.+..+.+|...|.+++ +|++|+.|| |++||+++.....
T Consensus 133 ~~~~v~~v~~s~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~ 210 (401)
T 4aez_A 133 ESTYVASVKWSHDGSFLSVGLG--NGLVDIYDVESQTKLRTMAGHQARVGCLSWNRHVLSSGSRSGAIHHHDVRIANHQI 210 (401)
T ss_dssp TTCCEEEEEECTTSSEEEEEET--TSCEEEEETTTCCEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEETTSSSCEE
T ss_pred CCCCEEEEEECCCCCEEEEECC--CCeEEEEECcCCeEEEEecCCCCceEEEEECCCEEEEEcCCCCEEEEecccCccee
Confidence 4567999999999999999776 99999999999999999999999999999 999999999 9999998555444
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
..+.+|.. .+.+++|+|++..+++++.|+.|++||+++++++..+. +...|.+++|+|+
T Consensus 211 ~~~~~~~~--~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~ 270 (401)
T 4aez_A 211 GTLQGHSS--EVCGLAWRSDGLQLASGGNDNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPW 270 (401)
T ss_dssp EEEECCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTCSSEEEEECCCSSCCCEEEECTT
T ss_pred eEEcCCCC--CeeEEEEcCCCCEEEEEeCCCeEEEccCCCCCccEEecCCcceEEEEEECCC
Confidence 56677765 47788999998888888889999999999999988875 6789999999995
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.86 E-value=9.1e-21 Score=163.32 Aligned_cols=139 Identities=12% Similarity=0.139 Sum_probs=114.1
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
|...|.+++++|+|.+|++++. ||+|+|||+.+++++..+.+|.++|.+++ +|+|||.|+ |||||......
T Consensus 429 h~~~v~~v~~s~~g~~l~sgs~--Dg~v~vwd~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~ 506 (694)
T 3dm0_A 429 HSHFVEDVVLSSDGQFALSGSW--DGELRLWDLAAGVSTRRFVGHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGECK 506 (694)
T ss_dssp CSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEE
T ss_pred CCCcEEEEEECCCCCEEEEEeC--CCcEEEEECCCCcceeEEeCCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcc
Confidence 4456889999999999999776 99999999999999999999999999998 899999999 99999865322
Q ss_pred eeeEE---eecCcceEEEEEeecCCe--EEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 86 LEQIY---ENSQEDVCIVERLFSSSL--VAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 86 ~~~~~---~~~~~~~~v~~~~fs~~~--~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
. .+. .+|.. .+.+++|+|++ ..+++++.|++|+|||+++++++..+. |.+.|.+++|+|+ .++....+
T Consensus 507 ~-~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~D 582 (694)
T 3dm0_A 507 Y-TISEGGEGHRD--WVSCVRFSPNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAGHTGYVSTVAVSPDGSLCASGGKD 582 (694)
T ss_dssp E-EECSSTTSCSS--CEEEEEECSCSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred e-eeccCCCCCCC--cEEEEEEeCCCCcceEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCC
Confidence 2 222 24543 47788899876 457777789999999999999988886 6789999999997 45555544
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=163.07 Aligned_cols=148 Identities=13% Similarity=0.167 Sum_probs=123.4
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG 74 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg 74 (161)
|++.+++ ..+ +..|.+++++|||.++|+++. ||.|+|||+.+++.+..+.+|.++|++++ +|++|+.||
T Consensus 3 l~~~~~~-~~h--~~~v~~i~~sp~~~~la~~~~--~g~v~iwd~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg 77 (814)
T 3mkq_A 3 LDIKKTF-SNR--SDRVKGIDFHPTEPWVLTTLY--SGRVEIWNYETQVEVRSIQVTETPVRAGKFIARKNWIIVGSDDF 77 (814)
T ss_dssp CCCEEEE-EEE--CSCEEEEEECSSSSEEEEEET--TSEEEEEETTTTEEEEEEECCSSCEEEEEEEGGGTEEEEEETTS
T ss_pred cccceee-ecC--CCceEEEEECCCCCEEEEEeC--CCEEEEEECCCCceEEEEecCCCcEEEEEEeCCCCEEEEEeCCC
Confidence 4567777 444 445999999999999999776 99999999999999999999999999999 899999999
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC-CeEEEEE-ecCceEEEEECC-c--
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG-SEICNYS-FSNTILAVKLNR-K-- 148 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~-~~i~~l~-~~~~V~~v~~~~-~-- 148 (161)
|++||+.+++.+ ..+.+|.. .+.+++|+|++..+++++.|++|++||+.++ .+...+. +...|.+++|+| +
T Consensus 78 ~i~vw~~~~~~~~-~~~~~~~~--~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~ 154 (814)
T 3mkq_A 78 RIRVFNYNTGEKV-VDFEAHPD--YIRSIAVHPTKPYVLSGSDDLTVKLWNWENNWALEQTFEGHEHFVMCVAFNPKDPS 154 (814)
T ss_dssp EEEEEETTTCCEE-EEEECCSS--CEEEEEECSSSSEEEEEETTSEEEEEEGGGTSEEEEEEECCSSCEEEEEEETTEEE
T ss_pred eEEEEECCCCcEE-EEEecCCC--CEEEEEEeCCCCEEEEEcCCCEEEEEECCCCceEEEEEcCCCCcEEEEEEEcCCCC
Confidence 999999998766 45567765 4778899999988888888999999999987 5555665 678999999999 5
Q ss_pred EEEEEecc
Q psy505 149 KEEEEDEE 156 (161)
Q Consensus 149 ~~vv~~~~ 156 (161)
.++++..+
T Consensus 155 ~l~~~~~d 162 (814)
T 3mkq_A 155 TFASGCLD 162 (814)
T ss_dssp EEEEEETT
T ss_pred EEEEEeCC
Confidence 44444443
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.86 E-value=3.3e-20 Score=149.08 Aligned_cols=142 Identities=12% Similarity=0.112 Sum_probs=116.5
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
.+...|.+++++|++.++++++. ||+|++||+.+++++..+.+|..+|.+++ +|++|+.|| |++||+++++
T Consensus 137 ~h~~~v~~~~~~~~~~~l~s~s~--d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~ 214 (420)
T 3vl1_A 137 AHVSEITKLKFFPSGEALISSSQ--DMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDRGRNVLSASLDGTIRLWECGTGT 214 (420)
T ss_dssp SSSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCCCEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTE
T ss_pred cccCccEEEEECCCCCEEEEEeC--CCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCCCCEEEEEcCCCcEEEeECCCCc
Confidence 45567999999999999998776 99999999999999999999999999999 899999999 9999999987
Q ss_pred ceeeEEeecC---cceE-------------------EEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--ecCce
Q psy505 85 TLEQIYENSQ---EDVC-------------------IVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--FSNTI 140 (161)
Q Consensus 85 ~~~~~~~~~~---~~~~-------------------v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--~~~~V 140 (161)
.+ ..+..+. ..+. +.+++|+|++..+++++.|+.|++||+++++.+..+. +...|
T Consensus 215 ~~-~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v 293 (420)
T 3vl1_A 215 TI-HTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSC 293 (420)
T ss_dssp EE-EEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCE
T ss_pred ee-EEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCc
Confidence 65 3444332 2221 2234568889888988899999999999999887775 46799
Q ss_pred EEEEECCc---EEEEEecc
Q psy505 141 LAVKLNRK---KEEEEDEE 156 (161)
Q Consensus 141 ~~v~~~~~---~~vv~~~~ 156 (161)
.+++|+|+ .+++...+
T Consensus 294 ~~~~~~~~~~~~l~~g~~d 312 (420)
T 3vl1_A 294 NSLTVDGNNANYIYAGYEN 312 (420)
T ss_dssp EEEEECSSCTTEEEEEETT
T ss_pred eeEEEeCCCCCEEEEEeCC
Confidence 99999998 56665554
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.86 E-value=6.7e-20 Score=142.15 Aligned_cols=139 Identities=14% Similarity=0.131 Sum_probs=117.7
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee------eEEEecCCc-eEEEEeCC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~ 82 (161)
.+...+.+++++|++.++++++. ||.|++||+.+++ ....+.+|..+|.+++ +|++|+.|| |++||+++
T Consensus 95 ~~~~~v~~~~~~~~~~~l~~~~~--d~~i~~~d~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~ 172 (337)
T 1gxr_A 95 NRDNYIRSCKLLPDGCTLIVGGE--ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEES--SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCCcEEEEEEcCCCCEEEEEcC--CCcEEEEECCCCCcceeeecccCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC
Confidence 45567999999999999998776 9999999999987 6678899999999998 899999999 99999998
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEec
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEEDE 155 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~~ 155 (161)
++.. ..+.+|.. .+.+++|+|++..+++++.|+.|++||+++++.+..+.+...|.+++|+|+ .+++...
T Consensus 173 ~~~~-~~~~~~~~--~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 244 (337)
T 1gxr_A 173 QTLV-RQFQGHTD--GASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGME 244 (337)
T ss_dssp TEEE-EEECCCSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEET
T ss_pred Ccee-eeeecccC--ceEEEEECCCCCEEEEEecCCcEEEEECCCCceEeeecCCCceEEEEECCCCCEEEEEcC
Confidence 7655 45566664 477889999887788877899999999999999988889999999999997 4555443
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=7.6e-21 Score=154.19 Aligned_cols=150 Identities=12% Similarity=0.157 Sum_probs=117.6
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceee----e------eEEEe
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAAL----A------SLSVG 70 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l----~------~lasg 70 (161)
++++++ ..+++...|.+++++|++.++++++. ||+|++||+++++++.++. +|..+|.++ . +|++|
T Consensus 203 ~~~~~~-~~~~h~~~v~~~~~s~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~ 279 (437)
T 3gre_A 203 ERLQII-ENSPRHGAVSSICIDEECCVLILGTT--RGIIDIWDIRFNVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGG 279 (437)
T ss_dssp CEEEEE-ECCGGGCCEEEEEECTTSCEEEEEET--TSCEEEEETTTTEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEE
T ss_pred eeeEEE-ccCCCCCceEEEEECCCCCEEEEEcC--CCeEEEEEcCCccEEEEEecCCCCceEEEEeccccCCCccEEEEE
Confidence 456677 45445667999999999999999776 9999999999999999987 888999999 3 89999
Q ss_pred cCCc-eEEEEeCCcCceeeEEeecCc------------------------ceEEEEEeecCCeEEEEecCCCCeEEEEec
Q psy505 71 TKSG-YRLFSLNSIDTLEQIYENSQE------------------------DVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125 (161)
Q Consensus 71 s~dg-iriwd~~~~~~~~~~~~~~~~------------------------~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~ 125 (161)
+.|| |+|||+++++++ ..+.+|.. ...+.+++|+ ++..+++++.|+.|++||+
T Consensus 280 ~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~v~~l~~~-~~~~l~s~~~d~~i~~wd~ 357 (437)
T 3gre_A 280 SSKTFLTIWNFVKGHCQ-YAFINSDEQPSMEHFLPIEKGLEELNFCGIRSLNALSTISVS-NDKILLTDEATSSIVMFSL 357 (437)
T ss_dssp STTEEEEEEETTTTEEE-EEEESSSSCCCGGGGSCBCSSGGGCCCCCCCSGGGGCCEEEE-TTEEEEEEGGGTEEEEEET
T ss_pred cCCCcEEEEEcCCCcEE-EEEEcCCCCCccceecccccccccceecccccCCceEEEEEC-CceEEEecCCCCeEEEEEC
Confidence 9999 999999988765 34444421 1125567788 5567788888999999999
Q ss_pred CCCCeEEEEE--------------------------------------ecCceEEEEECCc----EEEEEecc
Q psy505 126 KRGSEICNYS--------------------------------------FSNTILAVKLNRK----KEEEEDEE 156 (161)
Q Consensus 126 ~~~~~i~~l~--------------------------------------~~~~V~~v~~~~~----~~vv~~~~ 156 (161)
++++++..+. |.+.|.+++|+++ .++.+..+
T Consensus 358 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~I~~i~~~~~~~~~~l~s~~~d 430 (437)
T 3gre_A 358 NELSSSKAVISPSRFSDVFIPTQVTANLTMLLRKMKRTSTHSVDDSLYHHDIINSISTCEVDETPLLVACDNS 430 (437)
T ss_dssp TCGGGCEEEECC--CCCEEEEEEEETTEEEEEEECC-------------CCCEEEEEEEESSSSEEEEEEETT
T ss_pred CCcccceEEecccccCceEEEEEeecceEEEEEecccccccccCcccccccceeeEeeeccCCceEEEEEcCC
Confidence 9998777665 5678999999876 55555544
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.85 E-value=1.3e-20 Score=151.89 Aligned_cols=136 Identities=7% Similarity=0.071 Sum_probs=114.4
Q ss_pred CCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCC-------CceeeeeccCccceeee-------eEEEecCCc-eE
Q psy505 13 NPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNL-------HAKTMIPAHDSPLAALA-------SLSVGTKSG-YR 76 (161)
Q Consensus 13 ~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~-------~~~~~l~~H~~~V~~l~-------~lasgs~dg-ir 76 (161)
+...|.+++++| ++.++|+++. ||+|+|||+.++ +++..+.+|...|.+++ +|++|+.|| |+
T Consensus 80 h~~~V~~~~~~p~~~~~l~s~s~--dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~~~dg~i~ 157 (402)
T 2aq5_A 80 HTAPVLDIAWCPHNDNVIASGSE--DCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPTAQNVLLSAGCDNVIL 157 (402)
T ss_dssp CSSCEEEEEECTTCTTEEEEEET--TSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSSBTTEEEEEETTSCEE
T ss_pred CCCCEEEEEeCCCCCCEEEEEeC--CCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcCCCCEEEEEcCCCEEE
Confidence 556799999999 8999998776 999999999998 67889999999999998 799999999 99
Q ss_pred EEEeCCcCceeeEE--eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE-E-ecC-ceEEEEECCcEEE
Q psy505 77 LFSLNSIDTLEQIY--ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY-S-FSN-TILAVKLNRKKEE 151 (161)
Q Consensus 77 iwd~~~~~~~~~~~--~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l-~-~~~-~V~~v~~~~~~~v 151 (161)
|||+++++.+ ..+ .+|.. .+.+++|+|++..+++++.|+.|+|||+++++++..+ . +.+ .+..+.|+|+.-.
T Consensus 158 iwd~~~~~~~-~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (402)
T 2aq5_A 158 VWDVGTGAAV-LTLGPDVHPD--TIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDRPHEGTRPVHAVFVSEGKI 234 (402)
T ss_dssp EEETTTTEEE-EEECTTTCCS--CEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEECSSCSSSCCEEEECSTTEE
T ss_pred EEECCCCCcc-EEEecCCCCC--ceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeeccCCCCCcceEEEEcCCCcE
Confidence 9999998765 344 45654 4778899999888888888999999999999999888 3 444 4899999998444
Q ss_pred EE
Q psy505 152 EE 153 (161)
Q Consensus 152 v~ 153 (161)
++
T Consensus 235 l~ 236 (402)
T 2aq5_A 235 LT 236 (402)
T ss_dssp EE
T ss_pred EE
Confidence 33
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=3.9e-21 Score=157.20 Aligned_cols=140 Identities=13% Similarity=0.102 Sum_probs=110.1
Q ss_pred CCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCce--eeeeccCccceeee-------eEEEecCCc-eEEEEeC
Q psy505 13 NPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAK--TMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 13 ~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~--~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~ 81 (161)
+...|.+|+|+| ++.+||+++. ||+|+|||+.+++.. ..+.+|.++|++|+ +|+|||.|| |||||++
T Consensus 118 ~~~~V~~l~~~P~~~~~lasGs~--dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~~~~l~s~s~D~~v~iwd~~ 195 (435)
T 4e54_B 118 FDRRATSLAWHPTHPSTVAVGSK--GGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLNTNQFYASSMEGTTRLQDFK 195 (435)
T ss_dssp CSSCEEEEEECSSCTTCEEEEET--TSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSCTTEEEEECSSSCEEEEETT
T ss_pred CCCCEEEEEEeCCCCCEEEEEeC--CCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCCCCEEEEEeCCCEEEEeecc
Confidence 445699999999 5678888665 999999999887654 45679999999998 899999999 9999998
Q ss_pred CcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc---EEEEEecc
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK---KEEEEDEE 156 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~---~~vv~~~~ 156 (161)
++. +..+..++.....+.+++|+|++..+++++.|++|++||++ ++++..+. |...|.+++|+|+ .++....|
T Consensus 196 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d 272 (435)
T 4e54_B 196 GNI-LRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVD 272 (435)
T ss_dssp SCE-EEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETT
T ss_pred CCc-eeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCc
Confidence 743 43444444445567789999999889999999999999986 45555554 6789999999986 34444444
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.85 E-value=4.7e-20 Score=142.45 Aligned_cols=113 Identities=13% Similarity=0.110 Sum_probs=93.2
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC----CceeeeeccCccceeee--------eEEEecCCc-eEEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL----HAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~----~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd 79 (161)
|...|.+++++|++.+||+++. ||.|++||+.++ +....+.+|..+|.+++ +|++|+.|| |++||
T Consensus 10 H~~~v~~~~~~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~dg~v~vwd 87 (351)
T 3f3f_A 10 HDDLVHDVVYDFYGRHVATCSS--DQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWE 87 (351)
T ss_dssp CSSCEEEEEECSSSSEEEEEET--TSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGGCSEEEEEETTSCEEEEE
T ss_pred cccceeEEEEcCCCCEEEEeeC--CCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCCCCEEEEEcCCCeEEEEe
Confidence 4556999999999999999776 999999999987 36677899999999997 799999999 99999
Q ss_pred eCCcCc--------eeeEEeecCcceEEEEEeecCC--eEEEEecCCCCeEEEEecCCCC
Q psy505 80 LNSIDT--------LEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 80 ~~~~~~--------~~~~~~~~~~~~~v~~~~fs~~--~~~~~s~~~d~~i~iWD~~~~~ 129 (161)
+++++. ....+.+|.. .+.+++|+|+ +..+++++.|+.|++||+++++
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~ 145 (351)
T 3f3f_A 88 EDPDQEECSGRRWNKLCTLNDSKG--SLYSVKFAPAHLGLKLACLGNDGILRLYDALEPS 145 (351)
T ss_dssp ECTTSCTTSSCSEEEEEEECCCSS--CEEEEEECCGGGCSEEEEEETTCEEEEEECSSTT
T ss_pred cCCCcccccccCcceeeeecccCC--ceeEEEEcCCCCCcEEEEecCCCcEEEecCCChH
Confidence 988631 2234556654 4778899998 7777777789999999988765
|
| >3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A | Back alignment and structure |
|---|
Probab=99.85 E-value=5.4e-21 Score=150.49 Aligned_cols=147 Identities=12% Similarity=0.094 Sum_probs=111.5
Q ss_pred ceEEecCCCCCCceeEEeecCC--CceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee--------eEEEe
Q psy505 3 VLHTIRDTPPNPNGICCLCVNS--DNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA--------SLSVG 70 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~--d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~--------~lasg 70 (161)
++.++ ..| ...|.+++++| ++.+||+++. ||+|+|||+++++ +...+.+|.++|++++ +||+|
T Consensus 49 ~~~~l-~gH--~~~V~~v~~~~~~~~~~l~s~s~--D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasg 123 (316)
T 3bg1_A 49 LIADL-RGH--EGPVWQVAWAHPMYGNILASCSY--DRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACG 123 (316)
T ss_dssp EEEEE-ECC--SSCEEEEEECCGGGSSCEEEEET--TSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEE
T ss_pred EEEEE-cCC--CccEEEEEeCCCCCCCEEEEEEC--CCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEE
Confidence 34566 444 44588888875 4788998776 9999999999874 5678899999999997 79999
Q ss_pred cCCc-eEEEEeCCcCce--eeEEeecCcceEEEEEeecCC-----------------eEEEEecCCCCeEEEEecCCC--
Q psy505 71 TKSG-YRLFSLNSIDTL--EQIYENSQEDVCIVERLFSSS-----------------LVAVVSLSSPRKLTVCHFKRG-- 128 (161)
Q Consensus 71 s~dg-iriwd~~~~~~~--~~~~~~~~~~~~v~~~~fs~~-----------------~~~~~s~~~d~~i~iWD~~~~-- 128 (161)
+.|| |++||++++... ...+.+|.. .+.+++|+|+ +..+++++.|++|+|||++.+
T Consensus 124 s~D~~i~lwd~~~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~ 201 (316)
T 3bg1_A 124 SSDGAISLLTYTGEGQWEVKKINNAHTI--GCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQ 201 (316)
T ss_dssp CSSSCEEEEEECSSSCEEECCBTTSSSS--CBCCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSC
T ss_pred cCCCCEEEEecCCCCCcceeeeeccccC--CcceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCc
Confidence 9999 999999875322 233445654 3667788886 246888889999999999865
Q ss_pred -CeEEEEE-ecCceEEEEECCc------EEEEEecc
Q psy505 129 -SEICNYS-FSNTILAVKLNRK------KEEEEDEE 156 (161)
Q Consensus 129 -~~i~~l~-~~~~V~~v~~~~~------~~vv~~~~ 156 (161)
+++..+. |.+.|.+++|+|+ .++.+..|
T Consensus 202 ~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D 237 (316)
T 3bg1_A 202 WKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQD 237 (316)
T ss_dssp EEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETT
T ss_pred cceeeecccCCCceEEEEecCCCCCCCceEEEEcCC
Confidence 3445554 6789999999996 36666655
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.85 E-value=2.3e-20 Score=146.94 Aligned_cols=138 Identities=12% Similarity=0.086 Sum_probs=108.9
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcC--CCCceeeeeccCccceeee--------eEEEecC
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDAD--NLHAKTMIPAHDSPLAALA--------SLSVGTK 72 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~--~~~~~~~l~~H~~~V~~l~--------~lasgs~ 72 (161)
++.++ ..| ...|.+++++|++.+||+++. ||.|+|||+. +++.+..+.+|.++|++++ +|++|+.
T Consensus 3 ~~~~~-~~h--~~~v~~~~~s~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~ 77 (379)
T 3jrp_A 3 MVVIA-NAH--NELIHDAVLDYYGKRLATCSS--DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSY 77 (379)
T ss_dssp --CCE-EEC--CCCEEEEEECSSSSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEET
T ss_pred ccEEe-cCC--cccEEEEEEcCCCCEEEEEEC--CCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEecc
Confidence 44555 444 446999999999999999776 9999999998 5677889999999999998 8999999
Q ss_pred Cc-eEEEEeCCcCc-eeeEEeecCcceEEEEEeecCC--eEEEEecCCCCeEEEEecCCCCeEE--EE-EecCceEEEEE
Q psy505 73 SG-YRLFSLNSIDT-LEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTVCHFKRGSEIC--NY-SFSNTILAVKL 145 (161)
Q Consensus 73 dg-iriwd~~~~~~-~~~~~~~~~~~~~v~~~~fs~~--~~~~~s~~~d~~i~iWD~~~~~~i~--~l-~~~~~V~~v~~ 145 (161)
|| |++||+++++. ....+.+|.. .+.+++|+|+ +..+++++.|++|++||+++++... .+ .+...|.+++|
T Consensus 78 dg~v~iwd~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~~~~~~v~~~~~ 155 (379)
T 3jrp_A 78 DGKVLIWKEENGRWSQIAVHAVHSA--SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASW 155 (379)
T ss_dssp TSCEEEEEEETTEEEEEEEECCCSS--CEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEECCTTCEEEEEE
T ss_pred CCEEEEEEcCCCceeEeeeecCCCc--ceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEecCCCCceEEEEE
Confidence 99 99999988751 1234455654 4778899998 7677777789999999999885433 33 35789999999
Q ss_pred CC
Q psy505 146 NR 147 (161)
Q Consensus 146 ~~ 147 (161)
+|
T Consensus 156 ~~ 157 (379)
T 3jrp_A 156 AP 157 (379)
T ss_dssp CC
T ss_pred cC
Confidence 98
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.85 E-value=5e-20 Score=166.58 Aligned_cols=140 Identities=13% Similarity=0.190 Sum_probs=122.0
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
.|...|.+++++|||.++|+++. ||+|++||+.+++++..+.+|.++|.+++ +||+|+.|| |+|||+.+++
T Consensus 613 ~h~~~v~~~~~s~~~~~l~s~~~--d~~i~vw~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d~~v~vwd~~~~~ 690 (1249)
T 3sfz_A 613 PHTDAVYHACFSQDGQRIASCGA--DKTLQVFKAETGEKLLDIKAHEDEVLCCAFSSDDSYIATCSADKKVKIWDSATGK 690 (1249)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred cccccEEEEEECCCCCEEEEEeC--CCeEEEEECCCCCEEEEeccCCCCEEEEEEecCCCEEEEEeCCCeEEEEECCCCc
Confidence 45667999999999999999776 99999999999999999999999999998 899999999 9999999988
Q ss_pred ceeeEEeecCcceEEEEEeecC--CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 85 TLEQIYENSQEDVCIVERLFSS--SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~--~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
.+ ..+.+|... +.+++|+| +...+++++.|++|++||+++++++..+. |.+.|.+++|+|+ .++++..+
T Consensus 691 ~~-~~~~~~~~~--v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~~~~~~~~~~h~~~v~~~~~sp~~~~l~s~s~d 764 (1249)
T 3sfz_A 691 LV-HTYDEHSEQ--VNCCHFTNKSNHLLLATGSNDFFLKLWDLNQKECRNTMFGHTNSVNHCRFSPDDELLASCSAD 764 (1249)
T ss_dssp EE-EEEECCSSC--EEEEEECSSSSCCEEEEEETTSCEEEEETTSSSEEEEECCCSSCEEEEEECSSTTEEEEEESS
T ss_pred eE-EEEcCCCCc--EEEEEEecCCCceEEEEEeCCCeEEEEECCCcchhheecCCCCCEEEEEEecCCCEEEEEECC
Confidence 66 566778654 66778888 67778888899999999999999998876 6789999999997 56666554
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.85 E-value=5.3e-21 Score=151.96 Aligned_cols=140 Identities=8% Similarity=0.066 Sum_probs=105.6
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC---ceeeeeccCccceeee------eEEEecCCc-eEEEEeCC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH---AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~---~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~ 82 (161)
+...|.+++++|++.++++++. ||+|++||+.+++ +...+.+|..+|++++ +|++|+.|+ |++||+++
T Consensus 54 h~~~v~~~~~s~~~~~l~s~s~--d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 131 (377)
T 3dwl_C 54 HDKIVTCVDWAPKSNRIVTCSQ--DRNAYVYEKRPDGTWKQTLVLLRLNRAATFVRWSPNEDKFAVGSGARVISVCYFEQ 131 (377)
T ss_dssp CSSCEEEEEECTTTCCEEEEET--TSSEEEC------CCCCEEECCCCSSCEEEEECCTTSSCCEEEESSSCEEECCC--
T ss_pred CCceEEEEEEeCCCCEEEEEeC--CCeEEEEEcCCCCceeeeeEecccCCceEEEEECCCCCEEEEEecCCeEEEEEECC
Confidence 4556999999999999998776 9999999999987 6778899999999999 899999999 99999988
Q ss_pred cCc--eeeEEee-cCcceEEEEEeecCCeEEEEecCCCCeEEEEecC------------------CCCeEEEEEecCceE
Q psy505 83 IDT--LEQIYEN-SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK------------------RGSEICNYSFSNTIL 141 (161)
Q Consensus 83 ~~~--~~~~~~~-~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~------------------~~~~i~~l~~~~~V~ 141 (161)
++. +...+.+ |.. .+.+++|+|++..+++++.|++|++||++ .++++..+.+.+.|.
T Consensus 132 ~~~~~~~~~~~~~h~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 209 (377)
T 3dwl_C 132 ENDWWVSKHLKRPLRS--TILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDAKPEASVWGSRLPFNTVCAEYPSGGWVH 209 (377)
T ss_dssp ---CCCCEEECSSCCS--CEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-CCCSCSSCSCCCEEEEEECCCCSSSEE
T ss_pred cccceeeeEeecccCC--CeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCCCccccccccccchhhhhhcccCCceEE
Confidence 763 2234455 654 47789999998888888889999999985 344555565678999
Q ss_pred EEEECCc--EEEEEecc
Q psy505 142 AVKLNRK--KEEEEDEE 156 (161)
Q Consensus 142 ~v~~~~~--~~vv~~~~ 156 (161)
+++|+|+ .++....+
T Consensus 210 ~~~~sp~~~~l~~~~~d 226 (377)
T 3dwl_C 210 AVGFSPSGNALAYAGHD 226 (377)
T ss_dssp EEEECTTSSCEEEEETT
T ss_pred EEEECCCCCEEEEEeCC
Confidence 9999997 46666555
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.85 E-value=1.1e-19 Score=144.99 Aligned_cols=147 Identities=15% Similarity=0.196 Sum_probs=117.4
Q ss_pred cceEEecCCCCCCceeEEeecCCCc-eEEEEcCCCCcceEEEEEcCCCCceeeee--ccCccceeee-------eEEEec
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDN-CYLAYPGSNSIGEVQIFDADNLHAKTMIP--AHDSPLAALA-------SLSVGT 71 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~-~~la~~g~~~dg~v~iWd~~~~~~~~~l~--~H~~~V~~l~-------~lasgs 71 (161)
++++++ . .+...|.+++++|++ .++|+++. ||.|+|||+.+++....+. +|.+.|.+++ +|++|+
T Consensus 64 ~~~~~~-~--~h~~~v~~~~~~~~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~ 138 (383)
T 3ei3_B 64 KLHRTA-S--PFDRRVTSLEWHPTHPTTVAVGSK--GGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFNTNQLFVSS 138 (383)
T ss_dssp EEEEEE-C--CCSSCEEEEEECSSCTTEEEEEEB--TSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTEEEEEEEEE
T ss_pred ceEEec-c--CCCCCEEEEEECCCCCCEEEEEcC--CCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCCCCEEEEEe
Confidence 345555 3 345679999999998 88888775 9999999999998887775 7999999998 899999
Q ss_pred CCc-eEEEEeCCcCceeeEEeecC-cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 72 KSG-YRLFSLNSIDTLEQIYENSQ-EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 72 ~dg-iriwd~~~~~~~~~~~~~~~-~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
.|| |++||+++ ..+. .+..+. ....+.+++|+|++..+++++.|+.|++||+ +++++..+. +...|.+++|+|+
T Consensus 139 ~d~~i~iwd~~~-~~~~-~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~-~~~~~~~~~~h~~~v~~~~~~~~ 215 (383)
T 3ei3_B 139 IRGATTLRDFSG-SVIQ-VFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGL-DGHEIFKEKLHKAKVTHAEFNPR 215 (383)
T ss_dssp TTTEEEEEETTS-CEEE-EEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEET-TSCEEEEEECSSSCEEEEEECSS
T ss_pred CCCEEEEEECCC-CceE-EEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEEC-CCCEEEEeccCCCcEEEEEECCC
Confidence 999 99999986 4443 333332 2235788999999888888889999999999 577888876 6789999999998
Q ss_pred ---EEEEEecc
Q psy505 149 ---KEEEEDEE 156 (161)
Q Consensus 149 ---~~vv~~~~ 156 (161)
.++.+..+
T Consensus 216 ~~~~l~s~~~d 226 (383)
T 3ei3_B 216 CDWLMATSSVD 226 (383)
T ss_dssp CTTEEEEEETT
T ss_pred CCCEEEEEeCC
Confidence 45665555
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.6e-21 Score=150.30 Aligned_cols=139 Identities=14% Similarity=0.157 Sum_probs=115.9
Q ss_pred CCceeEEeecCCC----ceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEe
Q psy505 13 NPNGICCLCVNSD----NCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 13 ~~~~v~~~~~~~d----~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~ 80 (161)
+...+.+++++|+ |.++++++. ||.|++||+.+++++..+.+|..+|.+++ +|++|+.|| |++||+
T Consensus 68 ~~~~v~~~~~~~~~~~~~~~l~~~~~--dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~ 145 (366)
T 3k26_A 68 ADENFYTCAWTYDSNTSHPLLAVAGS--RGIIRIINPITMQCIKHYVGHGNAINELKFHPRDPNLLLSVSKDHALRLWNI 145 (366)
T ss_dssp TTCCEEEEEEEECTTTCCEEEEEEET--TCEEEEECTTTCCEEEEEESCCSCEEEEEECSSCTTEEEEEETTSCEEEEET
T ss_pred CCCcEEEEEeccCCCCCCCEEEEecC--CCEEEEEEchhceEeeeecCCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEe
Confidence 4467889999888 778888776 99999999999999999999999999998 899999999 999999
Q ss_pred CCcCceeeEE---eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE----------------------
Q psy505 81 NSIDTLEQIY---ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS---------------------- 135 (161)
Q Consensus 81 ~~~~~~~~~~---~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~---------------------- 135 (161)
++++.. ..+ .+|.. .+.+++|+|++..+++++.|+.|++||+++++.+..+.
T Consensus 146 ~~~~~~-~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 222 (366)
T 3k26_A 146 QTDTLV-AIFGGVEGHRD--EVLSADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFP 222 (366)
T ss_dssp TTTEEE-EEECSTTSCSS--CEEEEEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCC
T ss_pred ecCeEE-EEecccccccC--ceeEEEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccC
Confidence 988755 344 35554 47889999998888888889999999999876543332
Q ss_pred -------ecCceEEEEECCcEEEEEecc
Q psy505 136 -------FSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 136 -------~~~~V~~v~~~~~~~vv~~~~ 156 (161)
+.+.|.+++|+++.+++...+
T Consensus 223 ~~~~~~~~~~~v~~~~~~~~~l~~~~~d 250 (366)
T 3k26_A 223 DFSTRDIHRNYVDCVRWLGDLILSKSCE 250 (366)
T ss_dssp SEEECSSCSSCCCEEEEETTEEEEECSS
T ss_pred ccccccCCcceEEEEEEcCCEEEEEecC
Confidence 678899999998888877655
|
| >2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.4e-20 Score=159.42 Aligned_cols=140 Identities=11% Similarity=0.078 Sum_probs=109.0
Q ss_pred ceeEEeecCCC------ceEEEEcCCCCcceEEEEEcCCCCc-----------eeeeeccCccceeee-----eEEEecC
Q psy505 15 NGICCLCVNSD------NCYLAYPGSNSIGEVQIFDADNLHA-----------KTMIPAHDSPLAALA-----SLSVGTK 72 (161)
Q Consensus 15 ~~v~~~~~~~d------~~~la~~g~~~dg~v~iWd~~~~~~-----------~~~l~~H~~~V~~l~-----~lasgs~ 72 (161)
..|..++++|+ +.+||+++. ||+|+|||+.++++ ..++.+|..+|++++ .||+|+.
T Consensus 208 ~~V~~v~wsp~~~~~~~~~~LAs~s~--DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~~~lasgs~ 285 (524)
T 2j04_B 208 GEVWDLKWHEGCHAPHLVGCLSFVSQ--EGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSPTTVVCGFK 285 (524)
T ss_dssp CSEEEEEECSSCCCSSSSCEEEEEET--TSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSSSEEEEEET
T ss_pred CcEEEEEECCCCCCCCCCceEEEEec--CCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCCCeEEEEeC
Confidence 45888888886 578898776 99999999987643 247889999999998 8999999
Q ss_pred Cc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe-EEEEecCCCCeEEEEecCCCCeEEEEE-ec--CceEEEEECC
Q psy505 73 SG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL-VAVVSLSSPRKLTVCHFKRGSEICNYS-FS--NTILAVKLNR 147 (161)
Q Consensus 73 dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~-~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~--~~V~~v~~~~ 147 (161)
|| |+|||+++++.....+.+|...+..++.+|+|++ ..++|++.|++|+|||+++++++..+. +. ..|++|+|+|
T Consensus 286 DgtV~lWD~~~~~~~~~~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~~~~~~~~v~~v~fsp 365 (524)
T 2j04_B 286 NGFVAEFDLTDPEVPSFYDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTVSRFRGSNLVPVVYCP 365 (524)
T ss_dssp TSEEEEEETTBCSSCSEEEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEEEECSCCSCCCEEEET
T ss_pred CCEEEEEECCCCCCceEEeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccccccccCcccceEeCC
Confidence 99 9999998875443457788766444434788887 678888899999999999988776664 32 3589999999
Q ss_pred c--EEEEEecc
Q psy505 148 K--KEEEEDEE 156 (161)
Q Consensus 148 ~--~~vv~~~~ 156 (161)
+ .++....+
T Consensus 366 ~~~~l~s~~~d 376 (524)
T 2j04_B 366 QIYSYIYSDGA 376 (524)
T ss_dssp TTTEEEEECSS
T ss_pred CcCeEEEeCCC
Confidence 6 34444343
|
| >3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.84 E-value=3.3e-21 Score=153.16 Aligned_cols=136 Identities=11% Similarity=0.125 Sum_probs=105.5
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCC--CceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC--
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL--HAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID-- 84 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~--~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~-- 84 (161)
.|.+++++|||.++|+++. ||.|+|||+.++ +++..+.+|.++|.+++ +|++|+.|| |+|||+++++
T Consensus 13 ~v~~~~~s~~g~~l~~~~~--d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~d~~v~vwd~~~~~~~ 90 (377)
T 3dwl_C 13 PSYEHAFNSQRTEFVTTTA--TNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPKSNRIVTCSQDRNAYVYEKRPDGTW 90 (377)
T ss_dssp CCSCCEECSSSSEEECCCS--SSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTTTCCEEEEETTSSEEEC------CC
T ss_pred cEEEEEECCCCCEEEEecC--CCEEEEEEccCCceEEEEEEecCCceEEEEEEeCCCCEEEEEeCCCeEEEEEcCCCCce
Confidence 5888999999999998765 999999999998 78899999999999999 899999999 9999998876
Q ss_pred -ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC---eEEEEE--ecCceEEEEECCc--EEEEEecc
Q psy505 85 -TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS---EICNYS--FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 85 -~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~---~i~~l~--~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+. ..+.+|.. .+.+++|+|++..+++++.|++|++||+++++ ++..+. |.+.|.+++|+|+ .+++...+
T Consensus 91 ~~~-~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~d 167 (377)
T 3dwl_C 91 KQT-LVLLRLNR--AATFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLKRPLRSTILSLDWHPNNVLLAAGCAD 167 (377)
T ss_dssp CCE-EECCCCSS--CEEEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEECSSCCSCEEEEEECTTSSEEEEEESS
T ss_pred eee-eEecccCC--ceEEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEeecccCCCeEEEEEcCCCCEEEEEeCC
Confidence 23 33445654 47788999998888888889999999999887 356665 6789999999997 46655554
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.84 E-value=8.6e-20 Score=145.42 Aligned_cols=132 Identities=15% Similarity=0.153 Sum_probs=114.0
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeec---c---Cccceeee------eEEEecCC---c-
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA---H---DSPLAALA------SLSVGTKS---G- 74 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~---H---~~~V~~l~------~lasgs~d---g- 74 (161)
..+...+.+++++|++ ++++++. ||.|++||+++++++..+.+ | ..+|.+++ +|++|+.| |
T Consensus 183 ~~~~~~i~~~~~~~~~-~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~ 259 (397)
T 1sq9_A 183 MTPSQFATSVDISERG-LIATGFN--NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGC 259 (397)
T ss_dssp SSSCCCCCEEEECTTS-EEEEECT--TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEE
T ss_pred cCCCCCceEEEECCCc-eEEEEeC--CCcEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecCCCCce
Confidence 3455668899999999 8888665 99999999999999999999 9 99999998 89999999 9
Q ss_pred eEEEEeCCcCceeeEEee-------------cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE------
Q psy505 75 YRLFSLNSIDTLEQIYEN-------------SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS------ 135 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~-------------~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~------ 135 (161)
|++||+++++++ ..+.+ |.. .+.+++|+|++..+++++.|+.|+|||+++++++..+.
T Consensus 260 i~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~ 336 (397)
T 1sq9_A 260 ITLYETEFGERI-GSLSVPTHSSQASLGEFAHSS--WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDDI 336 (397)
T ss_dssp EEEEETTTCCEE-EEECBC--------CCBSBSS--CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGGC
T ss_pred EEEEECCCCccc-ceeccCcccccccccccccCC--cEEEEEECCCCCEEEEEeCCCeEEEEEcCCCceeEEEecccCcc
Confidence 999999998766 45555 654 47788999998888888889999999999999999887
Q ss_pred -e---------------cCceEEEEECCc
Q psy505 136 -F---------------SNTILAVKLNRK 148 (161)
Q Consensus 136 -~---------------~~~V~~v~~~~~ 148 (161)
+ ...|.+++|+|+
T Consensus 337 ~~~~~~~~g~~~~~~~~~~~v~~~~~~~~ 365 (397)
T 1sq9_A 337 EIEEDILAVDEHGDSLAEPGVFDVKFLKK 365 (397)
T ss_dssp SSGGGCCCBCTTSCBCSSCCEEEEEEECT
T ss_pred cchhhhhccccccccccCCceeEEEeccc
Confidence 4 688999999998
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-19 Score=144.41 Aligned_cols=147 Identities=15% Similarity=0.212 Sum_probs=109.5
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEE
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRL 77 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iri 77 (161)
+++++ ..+.+...|.+++|+|||.+||+++. ||+|+|||+.+++++..+.+|...+.+++ +|++|+.|+ +++
T Consensus 137 ~~~~~-~~~~~~~~V~sv~fspdg~~lasgs~--Dg~v~iWd~~~~~~~~~~~~h~~~v~~~s~~~~~l~sgs~d~~i~~ 213 (420)
T 4gga_A 137 ILQLL-QMEQPGEYISSVAWIKEGNYLAVGTS--SAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIHH 213 (420)
T ss_dssp EEEEE-ECCSTTCCEEEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEE
T ss_pred EEEEE-EecCCCCcEEEEEECCCCCEEEEEEC--CCeEEEEEcCCCcEEEEEeCCCCceEEEeeCCCEEEEEeCCCceeE
Confidence 44555 44556667999999999999999776 99999999999999999999999888877 555666655 666
Q ss_pred EEeCCcCceeeEE----------------------------------------------eecCcceEEEEEeecC---Ce
Q psy505 78 FSLNSIDTLEQIY----------------------------------------------ENSQEDVCIVERLFSS---SL 108 (161)
Q Consensus 78 wd~~~~~~~~~~~----------------------------------------------~~~~~~~~v~~~~fs~---~~ 108 (161)
||.+........+ ..|.. .|.+++|+| +.
T Consensus 214 ~d~~~~~~~~~~~~~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~~~~~~~~~~~~~--~V~~~~~~p~~~~~ 291 (420)
T 4gga_A 214 HDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQG--AVKAVAWCPWQSNV 291 (420)
T ss_dssp EETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSCSCCSEEECCCSS--CEEEEEECTTCTTE
T ss_pred eeecccceeeEEecccccceeeeeecCCCCeeeeeeccccceEEeeccccccceeeeeecccCC--ceeeeeeCCCcccE
Confidence 6544322211111 22222 356677775 55
Q ss_pred EEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEe
Q psy505 109 VAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 109 ~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~ 154 (161)
+++++|+.|++|++||+++++++..+.....|.++.|+|+ .++++.
T Consensus 292 la~~~gs~D~~I~iwd~~t~~~~~~~~~~~~v~~~~~~~~~~~lv~~s 339 (420)
T 4gga_A 292 LATGGGTSDRHIRIWNVCSGACLSAVDAHSQVCSILWSPHYKELISGH 339 (420)
T ss_dssp EEEEECTTTCEEEEEETTTTEEEEEEECSSCEEEEEEETTTTEEEEEE
T ss_pred EEEEeecCCCEEEEEeCCccccceeeccccceeeeeecCCCCeEEEEE
Confidence 6677788899999999999999999988899999999886 555553
|
| >3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A | Back alignment and structure |
|---|
Probab=99.84 E-value=7.8e-20 Score=141.20 Aligned_cols=140 Identities=11% Similarity=0.134 Sum_probs=110.1
Q ss_pred CCceeEEeecCC--CceEEEEcCCCCcceEEEEEcCCC---------CceeeeeccCccceeee--------eEEEecCC
Q psy505 13 NPNGICCLCVNS--DNCYLAYPGSNSIGEVQIFDADNL---------HAKTMIPAHDSPLAALA--------SLSVGTKS 73 (161)
Q Consensus 13 ~~~~v~~~~~~~--d~~~la~~g~~~dg~v~iWd~~~~---------~~~~~l~~H~~~V~~l~--------~lasgs~d 73 (161)
+...|.+++++| |+.++++++. ||+|++||+.++ +++..+.+|.++|.+++ +|++|+.|
T Consensus 56 ~~~~v~~~~~~~~~d~~~l~s~~~--dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d 133 (351)
T 3f3f_A 56 HDSSIVAIDWASPEYGRIIASASY--DKTVKLWEEDPDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGND 133 (351)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEET--TSCEEEEEECTTSCTTSSCSEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred CCCcEEEEEEcCCCCCCEEEEEcC--CCeEEEEecCCCcccccccCcceeeeecccCCceeEEEEcCCCCCcEEEEecCC
Confidence 445689999998 6889998776 999999999987 45788999999999997 69999999
Q ss_pred c-eEEEEeCCcCcee-----------------------------------------------------------eEEeec
Q psy505 74 G-YRLFSLNSIDTLE-----------------------------------------------------------QIYENS 93 (161)
Q Consensus 74 g-iriwd~~~~~~~~-----------------------------------------------------------~~~~~~ 93 (161)
| |++||+++++.+. ..+.+|
T Consensus 134 g~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h 213 (351)
T 3f3f_A 134 GILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGH 213 (351)
T ss_dssp CEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCC
T ss_pred CcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCC
Confidence 9 9999987764221 122234
Q ss_pred CcceEEEEEeecCCe----EEEEecCCCCeEEEEecCCC-----------------------------------------
Q psy505 94 QEDVCIVERLFSSSL----VAVVSLSSPRKLTVCHFKRG----------------------------------------- 128 (161)
Q Consensus 94 ~~~~~v~~~~fs~~~----~~~~s~~~d~~i~iWD~~~~----------------------------------------- 128 (161)
.. .+.+++|+|++ ..+++++.|++|++||++++
T Consensus 214 ~~--~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (351)
T 3f3f_A 214 KS--LIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFDNSADVDMDAQGRSDSNTEEKAELQ 291 (351)
T ss_dssp CS--CEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC---------------------------------------C
T ss_pred Cc--ceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceeccCCCcccccccccccccccceeeeec
Confidence 43 47788999997 77888889999999999875
Q ss_pred -----CeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 129 -----SEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 129 -----~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+++..+. |.+.|.+++|+|+ .++.+..|
T Consensus 292 ~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~d 327 (351)
T 3f3f_A 292 SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDD 327 (351)
T ss_dssp CSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETT
T ss_pred ccccccEEEEEecccccEEEEEEcCCCCEEEEecCC
Confidence 4444554 5679999999997 46666554
|
| >3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.84 E-value=4.1e-20 Score=159.27 Aligned_cols=140 Identities=9% Similarity=0.092 Sum_probs=115.1
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeee----eccCccceeee--------eEEEecCCc-eEEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMI----PAHDSPLAALA--------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l----~~H~~~V~~l~--------~lasgs~dg-iriwd 79 (161)
|...|.+++++|++.++++++. ||+|+|||+.... ...+ .+|...|++++ +|++|+.|| ||+||
T Consensus 471 h~~~v~~~~~s~~~~~l~s~s~--D~~i~iwd~~~~~-~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd 547 (694)
T 3dm0_A 471 HTKDVLSVAFSLDNRQIVSASR--DRTIKLWNTLGEC-KYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWN 547 (694)
T ss_dssp CSSCEEEEEECTTSSCEEEEET--TSCEEEECTTSCE-EEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEE
T ss_pred CCCCEEEEEEeCCCCEEEEEeC--CCEEEEEECCCCc-ceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEE
Confidence 4456999999999999998776 9999999987543 3333 57999999998 599999999 99999
Q ss_pred eCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcE--EEEEeccc
Q psy505 80 LNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK--EEEEDEEE 157 (161)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~--~vv~~~~~ 157 (161)
+++++.. ..+.+|.+. |.+++|+|++..+++++.|++|+|||+++++++..+.....|.++.|+|++ ++...++.
T Consensus 548 ~~~~~~~-~~~~~h~~~--v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~sp~~~~l~~~~~~~ 624 (694)
T 3dm0_A 548 LSNCKLR-STLAGHTGY--VSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSLEANSVIHALCFSPNRYWLCAATEHG 624 (694)
T ss_dssp TTTCCEE-EEECCCSSC--EEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECCBCSSCEEEEEECSSSSEEEEEETTE
T ss_pred CCCCcEE-EEEcCCCCC--EEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEecCCCcEEEEEEcCCCcEEEEEcCCC
Confidence 9987654 567788754 778899999999999999999999999999998888888899999999984 44444443
Q ss_pred e
Q psy505 158 E 158 (161)
Q Consensus 158 ~ 158 (161)
|
T Consensus 625 i 625 (694)
T 3dm0_A 625 I 625 (694)
T ss_dssp E
T ss_pred E
Confidence 3
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.84 E-value=1.7e-19 Score=147.33 Aligned_cols=147 Identities=10% Similarity=0.199 Sum_probs=120.7
Q ss_pred ceEEecCCCCCCceeEEeecC--CCceEEEEcCCCCcceEEEEEcCCCCc-----------------------eeeeecc
Q psy505 3 VLHTIRDTPPNPNGICCLCVN--SDNCYLAYPGSNSIGEVQIFDADNLHA-----------------------KTMIPAH 57 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~--~d~~~la~~g~~~dg~v~iWd~~~~~~-----------------------~~~l~~H 57 (161)
+++++ ..+.. .|.+++++ |++.++++++. ||+|++||+.+++. +..+.+|
T Consensus 195 ~~~~~-~~h~~--~v~~l~~~~~~~~~~l~s~s~--d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 269 (464)
T 3v7d_B 195 CTHVF-EGHNS--TVRCLDIVEYKNIKYIVTGSR--DNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLRGH 269 (464)
T ss_dssp EEEEE-CCCSS--CEEEEEEEESSSCEEEEEEET--TSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEECCC
T ss_pred EEEEE-CCCCC--ccEEEEEecCCCCCEEEEEcC--CCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEccCc
Confidence 45566 44444 45555554 78889998776 99999999998763 5578899
Q ss_pred Cccceeee----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEE
Q psy505 58 DSPLAALA----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEIC 132 (161)
Q Consensus 58 ~~~V~~l~----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~ 132 (161)
...|.++. ++++|+.|| |++||+++++++ ..+.+|.. .+.+++|+|++..+++++.|++|++||+++++++.
T Consensus 270 ~~~v~~~~~~~~~l~~~~~d~~i~vwd~~~~~~~-~~~~~~~~--~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~ 346 (464)
T 3v7d_B 270 MASVRTVSGHGNIVVSGSYDNTLIVWDVAQMKCL-YILSGHTD--RIYSTIYDHERKRCISASMDTTIRIWDLENGELMY 346 (464)
T ss_dssp SSCEEEEEEETTEEEEEETTSCEEEEETTTTEEE-EEECCCSS--CEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEE
T ss_pred cceEEEEcCCCCEEEEEeCCCeEEEEECCCCcEE-EEecCCCC--CEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEE
Confidence 99999998 999999999 999999998765 45567765 47788999988888888899999999999999999
Q ss_pred EEE-ecCceEEEEECCcEEEEEeccc
Q psy505 133 NYS-FSNTILAVKLNRKKEEEEDEEE 157 (161)
Q Consensus 133 ~l~-~~~~V~~v~~~~~~~vv~~~~~ 157 (161)
.+. |...|.++.|+++.++.+..+.
T Consensus 347 ~~~~h~~~v~~~~~~~~~l~s~s~dg 372 (464)
T 3v7d_B 347 TLQGHTALVGLLRLSDKFLVSAAADG 372 (464)
T ss_dssp EECCCSSCEEEEEECSSEEEEEETTS
T ss_pred EEeCCCCcEEEEEEcCCEEEEEeCCC
Confidence 886 6789999999999999888763
|
| >4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.4e-20 Score=149.56 Aligned_cols=142 Identities=15% Similarity=0.099 Sum_probs=105.0
Q ss_pred CCceeEEeecCCCceEEEEcCCCC----cceEEEEEcCCCCce----eeeeccCccceeee-----eEEEecCCc-eEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNS----IGEVQIFDADNLHAK----TMIPAHDSPLAALA-----SLSVGTKSG-YRLF 78 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~----dg~v~iWd~~~~~~~----~~l~~H~~~V~~l~-----~lasgs~dg-iriw 78 (161)
+...|.+++|+|||.+||+++... ||.|++|+..++.+. ....+|...|.+++ .+++++.|| ||||
T Consensus 41 H~~~V~~v~fSpDG~~las~s~d~~~~wd~~v~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~s~d~~~l~~s~dg~v~lW 120 (357)
T 4g56_B 41 MEVQIGAVRYRRDGALLLAASSLSSRTWGGSIWVFKDPEGAPNESLCTAGVQTEAGVTDVAWVSEKGILVASDSGAVELW 120 (357)
T ss_dssp CCSEEEEEEECSSSCEEEEEECSSSSSCCEEEEEESSCC---CGGGCSEEEECSSCEEEEEEETTTEEEEEETTSCEEEC
T ss_pred ccCCEEEEEECCCCCEEEEEcCCCCccccCeEEEEECCCCCcceeEecccCCCCCCEEEEEEcCCCCEEEEECCCEEEEe
Confidence 556799999999999999976410 688999999887643 33467999999999 666788899 9999
Q ss_pred EeCCcCceee---EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc---EEE
Q psy505 79 SLNSIDTLEQ---IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK---KEE 151 (161)
Q Consensus 79 d~~~~~~~~~---~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~---~~v 151 (161)
|+++++.... ...+|.. .|.+++|+|++..+++++.|++|+|||+++++++..+. |.+.|.+++|+|+ .++
T Consensus 121 d~~~~~~~~~~~~~~~~h~~--~V~~v~~spdg~~l~sgs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~~~~~~ 198 (357)
T 4g56_B 121 EILEKESLLVNKFAKYEHDD--IVKTLSVFSDGTQAVSGGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGKDTIFL 198 (357)
T ss_dssp --------CCCCEEECCCSS--CEEEEEECSSSSEEEEEETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTCSSCEE
T ss_pred eccccceeEEEeeccCCCCC--CEEEEEECCCCCEEEEEeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCCCceee
Confidence 9988764321 1235654 47889999999889999899999999999999999887 6789999999886 355
Q ss_pred EEecc
Q psy505 152 EEDEE 156 (161)
Q Consensus 152 v~~~~ 156 (161)
.+..+
T Consensus 199 s~~~d 203 (357)
T 4g56_B 199 SCGED 203 (357)
T ss_dssp EEETT
T ss_pred eeccC
Confidence 55544
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.84 E-value=2.2e-20 Score=148.08 Aligned_cols=131 Identities=12% Similarity=0.191 Sum_probs=102.7
Q ss_pred CceeEEeecCC--CceEEEEcCCCCcceEEEEEcCCCCceeeeec-cCccceeee------eEEEecCCc-eEEEEeCCc
Q psy505 14 PNGICCLCVNS--DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA-HDSPLAALA------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 14 ~~~v~~~~~~~--d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~-H~~~V~~l~------~lasgs~dg-iriwd~~~~ 83 (161)
...|.+++++| ++.++++++. ||+|++||+++++++..+.. |..+|.+++ +||+|+.|| |+|||++++
T Consensus 125 ~~~v~~~~~~~~~~~~~l~s~s~--dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~ 202 (343)
T 3lrv_A 125 ANEIIYMYGHNEVNTEYFIWADN--RGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSP 202 (343)
T ss_dssp SSCEEEEECCC---CCEEEEEET--TCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCT
T ss_pred CCCEEEEEcCCCCCCCEEEEEeC--CCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCC
Confidence 34699999999 9999998776 99999999999998777754 556899998 899999999 999999998
Q ss_pred CceeeEEee-cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-e---cCce--EEEEECCcE
Q psy505 84 DTLEQIYEN-SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-F---SNTI--LAVKLNRKK 149 (161)
Q Consensus 84 ~~~~~~~~~-~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~---~~~V--~~v~~~~~~ 149 (161)
+.....+.+ |.. .|.+++|+|++..++++++ ++|+|||+++++++..+. + ...+ .+++|+|++
T Consensus 203 ~~~~~~~~~~h~~--~v~~l~fs~~g~~l~s~~~-~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 272 (343)
T 3lrv_A 203 DQASSRFPVDEEA--KIKEVKFADNGYWMVVECD-QTVVCFDLRKDVGTLAYPTYTIPEFKTGTVTYDIDDSG 272 (343)
T ss_dssp TSCCEECCCCTTS--CEEEEEECTTSSEEEEEES-SBEEEEETTSSTTCBSSCCCBC-----CCEEEEECTTS
T ss_pred CCCccEEeccCCC--CEEEEEEeCCCCEEEEEeC-CeEEEEEcCCCCcceeecccccccccccceEEEECCCC
Confidence 765234555 765 4788999999988888874 499999999988764433 1 1223 469999974
|
| >3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=4.5e-20 Score=150.68 Aligned_cols=145 Identities=15% Similarity=0.127 Sum_probs=116.5
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eE
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YR 76 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-ir 76 (161)
+++.++ .. +...+.+++++|++.++++++. ||+|++||+.+++++..+++|..+|.+++ +|++|+.|| |+
T Consensus 301 ~~~~~~-~~--~~~~v~~~~~~~~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~s~dg~v~ 375 (464)
T 3v7d_B 301 KCLYIL-SG--HTDRIYSTIYDHERKRCISASM--DTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIR 375 (464)
T ss_dssp EEEEEE-CC--CSSCEEEEEEETTTTEEEEEET--TSCEEEEETTTTEEEEEECCCSSCEEEEEECSSEEEEEETTSEEE
T ss_pred cEEEEe-cC--CCCCEEEEEEcCCCCEEEEEeC--CCcEEEEECCCCcEEEEEeCCCCcEEEEEEcCCEEEEEeCCCcEE
Confidence 345555 33 4456899999999999998776 99999999999999999999999999999 999999999 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE--EecCceEEEEECCcEEEEEe
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY--SFSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l--~~~~~V~~v~~~~~~~vv~~ 154 (161)
+||++++...... .+... +..++|+|++..+++++ |++|+|||+++++++..+ .+...|.+++|+++.++++.
T Consensus 376 vwd~~~~~~~~~~--~~~~~--~~~~~~~~~~~~l~~~~-dg~i~iwd~~~g~~~~~~~~~~~~~v~~v~~~~~~l~~~~ 450 (464)
T 3v7d_B 376 GWDANDYSRKFSY--HHTNL--SAITTFYVSDNILVSGS-ENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAV 450 (464)
T ss_dssp EEETTTCCEEEEE--ECTTC--CCEEEEEECSSEEEEEE-TTEEEEEETTTCCEEESCTTTTCSEEEEEEEETTEEEEEE
T ss_pred EEECCCCceeeee--cCCCC--ccEEEEEeCCCEEEEec-CCeEEEEECCCCcEEehhhccCCCcEEEEEecCCEEEEEE
Confidence 9999887643222 23333 33456777777777775 789999999999998763 35789999999999888876
Q ss_pred cc
Q psy505 155 EE 156 (161)
Q Consensus 155 ~~ 156 (161)
.+
T Consensus 451 ~~ 452 (464)
T 3v7d_B 451 EK 452 (464)
T ss_dssp EE
T ss_pred Ee
Confidence 53
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.83 E-value=5.7e-20 Score=148.67 Aligned_cols=125 Identities=10% Similarity=0.025 Sum_probs=86.0
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceee---e------e------------EEEecCCc-eEEEEeCC
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAAL---A------S------------LSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l---~------~------------lasgs~dg-iriwd~~~ 82 (161)
|+..||+++. |++|||||+.+|+++++|.+|...+.++ + + +++|+.|+ ||+||..+
T Consensus 192 ~~~~LaSgS~--D~TIkIWDl~TGk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~t 269 (356)
T 2w18_A 192 MQEALLGTTI--MNNIVIWNLKTGQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKT 269 (356)
T ss_dssp STTEEEEEET--TSEEEEEETTTCCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEEETTT
T ss_pred CCceEEEecC--CCcEEEEECCCCcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCC
Confidence 5567777665 9999999999999999999876644433 2 2 47899999 99999999
Q ss_pred cCceeeEE-----eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceE-EEEECCc--EEEEE
Q psy505 83 IDTLEQIY-----ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTIL-AVKLNRK--KEEEE 153 (161)
Q Consensus 83 ~~~~~~~~-----~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~-~v~~~~~--~~vv~ 153 (161)
|+.+. .+ .||... ..+..++ +..+++++.|++|+|||+++|+++.+|. |.+.|. .++|+|| .|+..
T Consensus 270 gk~l~-v~~~~~p~Gh~~~--~lsg~~s--g~~lASgS~DgTIkIWDl~tGk~l~tL~gH~~~vvs~vafSPDG~~LaSG 344 (356)
T 2w18_A 270 TLSVG-VMLYCLPPGQAGR--FLEGDVK--DHCAAAILTSGTIAIWDLLLGQCTALLPPVSDQHWSFVKWSGTDSHLLAG 344 (356)
T ss_dssp TEEEE-EEEECCCTTCCCC--EEEEEEE--TTEEEEEETTSCEEEEETTTCSEEEEECCC--CCCCEEEECSSSSEEEEE
T ss_pred CEEEE-EEEeeccCCCcce--eEccccC--CCEEEEEcCCCcEEEEECCCCcEEEEecCCCCCeEEEEEECCCCCEEEEE
Confidence 87553 32 355432 3344444 3356777789999999999999999997 556555 5899998 45555
Q ss_pred ecc
Q psy505 154 DEE 156 (161)
Q Consensus 154 ~~~ 156 (161)
..|
T Consensus 345 S~D 347 (356)
T 2w18_A 345 QKD 347 (356)
T ss_dssp CTT
T ss_pred ECC
Confidence 544
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.83 E-value=4.3e-19 Score=138.95 Aligned_cols=141 Identities=7% Similarity=0.019 Sum_probs=113.6
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
.+...|.+++++|+|.++++++. ||.|++||+.+++.+..+.+|.++|.+++ +|++++.|| |++||+++++
T Consensus 30 ~h~~~v~~~~~s~~~~~l~~~~~--dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~ 107 (369)
T 3zwl_B 30 GHERPLTQVKYNKEGDLLFSCSK--DSSASVWYSLNGERLGTLDGHTGTIWSIDVDCFTKYCVTGSADYSIKLWDVSNGQ 107 (369)
T ss_dssp CCSSCEEEEEECTTSCEEEEEES--SSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSEEEEEETTTEEEEEETTTCC
T ss_pred EeeceEEEEEEcCCCCEEEEEeC--CCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCc
Confidence 45566999999999999999776 99999999999999999999999999999 899999999 9999998876
Q ss_pred ceeeEEeecCcc----------------------------------------------------------eEEEEEeecC
Q psy505 85 TLEQIYENSQED----------------------------------------------------------VCIVERLFSS 106 (161)
Q Consensus 85 ~~~~~~~~~~~~----------------------------------------------------------~~v~~~~fs~ 106 (161)
.+..+ . +... ..+.+++|+|
T Consensus 108 ~~~~~-~-~~~~v~~~~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 185 (369)
T 3zwl_B 108 CVATW-K-SPVPVKRVEFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWST 185 (369)
T ss_dssp EEEEE-E-CSSCEEEEEECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECG
T ss_pred EEEEe-e-cCCCeEEEEEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcC
Confidence 54322 2 1100 0455667777
Q ss_pred CeEEEEecCCCCeEEEEecCC-CCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 107 SLVAVVSLSSPRKLTVCHFKR-GSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 107 ~~~~~~s~~~d~~i~iWD~~~-~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
++..+++++.|+.|++||+++ ++.+..+. +...|.+++|+|+ .+++...+
T Consensus 186 ~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 239 (369)
T 3zwl_B 186 KGKYIIAGHKDGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRD 239 (369)
T ss_dssp GGCEEEEEETTSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETT
T ss_pred CCCEEEEEcCCCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCC
Confidence 777777777889999999998 67777776 6789999999997 45555544
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.6e-19 Score=146.32 Aligned_cols=145 Identities=11% Similarity=-0.016 Sum_probs=107.6
Q ss_pred CCceeEEeecCC--------CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eE
Q psy505 13 NPNGICCLCVNS--------DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YR 76 (161)
Q Consensus 13 ~~~~v~~~~~~~--------d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-ir 76 (161)
|...|.+++|+| ||.+||++|. |++|||||+.++.++..+.+|.++|.+++ +|++|+.|| ||
T Consensus 135 H~~~v~~v~~~p~~~~~~~~d~~~las~s~--D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~ 212 (393)
T 4gq1_A 135 HHNFVNDIDIADVYSADNRLAEQVIASVGD--DCTLIIWRLTDEGPILAGYPLSSPGISVQFRPSNPNQLIVGERNGNIR 212 (393)
T ss_dssp CSSCEEEEEEEEEECTTCSEEEEEEEEEET--TSEEEEEEEETTEEEEEEEECSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCceEEEEEccccccccCCCCCEEEEEEC--CCeEEEEECCCCceeeeecCCCCCcEEEEECCCCCceEEecCCCCEEE
Confidence 445688888877 8999999776 99999999999998889999999999998 799999999 99
Q ss_pred EEEeCCcCceeeEE------------------------eec----------------------CcceEEEEE--------
Q psy505 77 LFSLNSIDTLEQIY------------------------ENS----------------------QEDVCIVER-------- 102 (161)
Q Consensus 77 iwd~~~~~~~~~~~------------------------~~~----------------------~~~~~v~~~-------- 102 (161)
+||+++++...... .+| .+.+.+..+
T Consensus 213 ~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~ 292 (393)
T 4gq1_A 213 IFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNE 292 (393)
T ss_dssp EEETTCCC----------CSCCCSEEEESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------
T ss_pred EEECCCCcccccccccCCcccceEEecccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCce
Confidence 99998764321100 011 011111111
Q ss_pred -----------eecC--------------------CeEEEEecCCCCeEEEEecCCCCeEEEE-EecCceEEEEECCc--
Q psy505 103 -----------LFSS--------------------SLVAVVSLSSPRKLTVCHFKRGSEICNY-SFSNTILAVKLNRK-- 148 (161)
Q Consensus 103 -----------~fs~--------------------~~~~~~s~~~d~~i~iWD~~~~~~i~~l-~~~~~V~~v~~~~~-- 148 (161)
.++| +...+++++.|++|+|||+.+++++..+ .+..+|.+++|+||
T Consensus 293 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~~~~~~~~~~~~~~V~svafspdG~ 372 (393)
T 4gq1_A 293 ISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFATAHSQHGLIQLINTYEKDSNSIPIQLGMPIVDFCWHQDGS 372 (393)
T ss_dssp -----------CCSCSEEEECSSCCSSCCEECSSCTTEEEEEETTTTEEEEEETTCTTCCEEEEECSSCEEEEEECTTSS
T ss_pred EeeecCccccEEEccccccccccCcceeEEEccCCCCEEEEEECCCCEEEEEECCCCcEEEEecCCCCcEEEEEEcCCCC
Confidence 1111 3446778888999999999999887665 47889999999998
Q ss_pred EEEEEecccee
Q psy505 149 KEEEEDEEEEK 159 (161)
Q Consensus 149 ~~vv~~~~~~~ 159 (161)
.|+++.++.+.
T Consensus 373 ~LA~as~~Gv~ 383 (393)
T 4gq1_A 373 HLAIATEGSVL 383 (393)
T ss_dssp EEEEEESSEEE
T ss_pred EEEEEeCCCeE
Confidence 78888877653
|
| >3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.83 E-value=2.1e-19 Score=145.69 Aligned_cols=135 Identities=19% Similarity=0.231 Sum_probs=108.5
Q ss_pred ceeEEee--cCCCceEEEEcCCCCcceEEEEEcCCCCceeeeec--cCccceeee------eEEEecCCc-eEEEEeCCc
Q psy505 15 NGICCLC--VNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA--HDSPLAALA------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 15 ~~v~~~~--~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~--H~~~V~~l~------~lasgs~dg-iriwd~~~~ 83 (161)
..+.++. ++|++.++++++. ||.|++||+++++++..+.+ |.++|++++ +|++|+.|| |++||++++
T Consensus 169 ~~~~~~~~~~~~~~~~l~~~~~--d~~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~ 246 (437)
T 3gre_A 169 EYAVRMRAFVNEEKSLLVALTN--LSRVIIFDIRTLERLQIIENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFN 246 (437)
T ss_dssp CCEEEEEEEECSSCEEEEEEET--TSEEEEEETTTCCEEEEEECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTT
T ss_pred cCceEEEEEEcCCCCEEEEEeC--CCeEEEEeCCCCeeeEEEccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCc
Confidence 3455555 5688999998776 99999999999999999998 899999998 899999999 999999997
Q ss_pred CceeeEEeecCcceEEEEE----eecCCeEEEEecCCCCeEEEEecCCCCeEEEEE------------------------
Q psy505 84 DTLEQIYENSQEDVCIVER----LFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS------------------------ 135 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~----~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~------------------------ 135 (161)
+++..+..+|. ..+.++ .|+|++..+++++.|++|+|||+++++++..+.
T Consensus 247 ~~~~~~~~~~~--~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~ 324 (437)
T 3gre_A 247 VLIRSWSFGDH--APITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFINSDEQPSMEHFLPIEKGLEELNFC 324 (437)
T ss_dssp EEEEEEBCTTC--EEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEESSSSCCCGGGGSCBCSSGGGCCCC
T ss_pred cEEEEEecCCC--CceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEEcCCCCCccceecccccccccceec
Confidence 76533222443 357777 566789899999999999999999999998886
Q ss_pred ---ecCceEEEEECCcEEEEE
Q psy505 136 ---FSNTILAVKLNRKKEEEE 153 (161)
Q Consensus 136 ---~~~~V~~v~~~~~~~vv~ 153 (161)
+...|.+++|++...++.
T Consensus 325 ~~~~~~~v~~l~~~~~~~l~s 345 (437)
T 3gre_A 325 GIRSLNALSTISVSNDKILLT 345 (437)
T ss_dssp CCCSGGGGCCEEEETTEEEEE
T ss_pred ccccCCceEEEEECCceEEEe
Confidence 344588888886644333
|
| >3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B* | Back alignment and structure |
|---|
Probab=99.83 E-value=8.5e-19 Score=139.86 Aligned_cols=139 Identities=14% Similarity=0.130 Sum_probs=112.6
Q ss_pred CCCCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeecc---Cccceeee------eEEEecCCc-eEEEE
Q psy505 11 PPNPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAH---DSPLAALA------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 11 ~~~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H---~~~V~~l~------~lasgs~dg-iriwd 79 (161)
..+...|.+++++| ++.++++++. ||.|++||+.+ +.+..+..| ...|.+++ +|++|+.|| |++||
T Consensus 115 ~~h~~~v~~~~~~~~~~~~l~s~~~--d~~i~iwd~~~-~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d 191 (383)
T 3ei3_B 115 MGPGDAITGMKFNQFNTNQLFVSSI--RGATTLRDFSG-SVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLG 191 (383)
T ss_dssp CSTTCBEEEEEEETTEEEEEEEEET--TTEEEEEETTS-CEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEE
T ss_pred CCcCCceeEEEeCCCCCCEEEEEeC--CCEEEEEECCC-CceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEE
Confidence 34667899999999 7788888765 99999999995 666666554 48899998 899999999 99999
Q ss_pred eCCcCceeeEEeecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecCC----CCeEEEEEecCceEEEEECC-c--EEE
Q psy505 80 LNSIDTLEQIYENSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKR----GSEICNYSFSNTILAVKLNR-K--KEE 151 (161)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~----~~~i~~l~~~~~V~~v~~~~-~--~~v 151 (161)
++ ++++ ..+.+|.. .+.+++|+|++. .+++++.|++|++||+++ ++++..+.+...|.+++|+| + .++
T Consensus 192 ~~-~~~~-~~~~~h~~--~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~ 267 (383)
T 3ei3_B 192 LD-GHEI-FKEKLHKA--KVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDKNSYIAEMPHEKPVNAAYFNPTDSTKLL 267 (383)
T ss_dssp TT-SCEE-EEEECSSS--CEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCSTTCEEEEEECSSCEEEEEECTTTSCEEE
T ss_pred CC-CCEE-EEeccCCC--cEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcccceEEEecCCCceEEEEEcCCCCCEEE
Confidence 94 5555 45667765 477889999886 677777899999999998 77888888899999999999 5 566
Q ss_pred EEecc
Q psy505 152 EEDEE 156 (161)
Q Consensus 152 v~~~~ 156 (161)
+...+
T Consensus 268 ~~~~d 272 (383)
T 3ei3_B 268 TTDQR 272 (383)
T ss_dssp EEESS
T ss_pred EEcCC
Confidence 55544
|
| >2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A | Back alignment and structure |
|---|
Probab=99.83 E-value=1.8e-19 Score=145.23 Aligned_cols=139 Identities=11% Similarity=0.061 Sum_probs=113.2
Q ss_pred CCceeEEeecCCCc-eEEEEcCCCCcceEEEEEcCCCCceeee--eccCccceeee------eEEEecCCc-eEEEEeCC
Q psy505 13 NPNGICCLCVNSDN-CYLAYPGSNSIGEVQIFDADNLHAKTMI--PAHDSPLAALA------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 13 ~~~~v~~~~~~~d~-~~la~~g~~~dg~v~iWd~~~~~~~~~l--~~H~~~V~~l~------~lasgs~dg-iriwd~~~ 82 (161)
+...|.+++++|++ .++++++. ||+|++||+.+++++..+ .+|.+.|.+++ +|++|+.|| |++||+++
T Consensus 130 h~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 130 HTKRVGIVAWHPTAQNVLLSAGC--DNVILVWDVGTGAAVLTLGPDVHPDTIYSVDWSRDGALICTSCRDKRVRVIEPRK 207 (402)
T ss_dssp CSSCEEEEEECSSBTTEEEEEET--TSCEEEEETTTTEEEEEECTTTCCSCEEEEEECTTSSCEEEEETTSEEEEEETTT
T ss_pred CCCeEEEEEECcCCCCEEEEEcC--CCEEEEEECCCCCccEEEecCCCCCceEEEEECCCCCEEEEEecCCcEEEEeCCC
Confidence 44568999999998 58887665 999999999999999999 89999999999 899999999 99999999
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEEEEec---CCCCeEEEEecCCCCe-EEEE--EecCceEEEEECCc--EEEEEe
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVAVVSL---SSPRKLTVCHFKRGSE-ICNY--SFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~---~~d~~i~iWD~~~~~~-i~~l--~~~~~V~~v~~~~~--~~vv~~ 154 (161)
++.+..+..+|.+. .+..+.|+|++..++++ +.|+.|++||+++++. +... .+...|.++.|+|+ .++++.
T Consensus 208 ~~~~~~~~~~~~~~-~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g 286 (402)
T 2aq5_A 208 GTVVAEKDRPHEGT-RPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEEPLSLQELDTSSGVLLPFFDPDTNIVYLCG 286 (402)
T ss_dssp TEEEEEEECSSCSS-SCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSSCSEEEECCCCSSCEEEEEETTTTEEEEEE
T ss_pred CceeeeeccCCCCC-cceEEEEcCCCcEEEEeccCCCCceEEEEcCccccCCceEEeccCCCceeEEEEcCCCCEEEEEE
Confidence 87664332566532 35678899999988887 7899999999998765 3333 35678999999997 455554
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=6.6e-20 Score=148.21 Aligned_cols=143 Identities=12% Similarity=0.102 Sum_probs=112.7
Q ss_pred CCceeEEeecCCCc-eEEEEcCCCCcceEEEEEcCCCCc----eeeeeccCc------------cceeee------eEEE
Q psy505 13 NPNGICCLCVNSDN-CYLAYPGSNSIGEVQIFDADNLHA----KTMIPAHDS------------PLAALA------SLSV 69 (161)
Q Consensus 13 ~~~~v~~~~~~~d~-~~la~~g~~~dg~v~iWd~~~~~~----~~~l~~H~~------------~V~~l~------~las 69 (161)
+...|.+++++|++ .++++++. ||+|++||+++++. +..+.+|.+ +|.+++ +|++
T Consensus 225 ~~~~v~~~~~~p~~~~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~ 302 (447)
T 3dw8_B 225 LTEVITAAEFHPNSCNTFVYSSS--KGTIRLCDMRASALCDRHSKLFEEPEDPSNRSFFSEIISSISDVKFSHSGRYMMT 302 (447)
T ss_dssp CCCCEEEEEECSSCTTEEEEEET--TSCEEEEETTTCSSSCTTCEEECCC-----CCHHHHHTTCEEEEEECTTSSEEEE
T ss_pred cCcceEEEEECCCCCcEEEEEeC--CCeEEEEECcCCccccceeeEeccCCCccccccccccCceEEEEEECCCCCEEEE
Confidence 45569999999998 88888776 99999999999987 789999987 899998 8899
Q ss_pred ecCCc-eEEEEeCC-cCceeeEEeecCcceE-------------EEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE
Q psy505 70 GTKSG-YRLFSLNS-IDTLEQIYENSQEDVC-------------IVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY 134 (161)
Q Consensus 70 gs~dg-iriwd~~~-~~~~~~~~~~~~~~~~-------------v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l 134 (161)
|+. | |+|||+++ ++++ ..+.+|..... +..++|+|++..+++++.|+.|+|||+++++.+...
T Consensus 303 ~~~-~~v~iwd~~~~~~~~-~~~~~~~~~~~~l~~~~~~~~i~~~~~~~~s~~~~~l~s~s~dg~v~iwd~~~~~~~~~~ 380 (447)
T 3dw8_B 303 RDY-LSVKVWDLNMENRPV-ETYQVHEYLRSKLCSLYENDCIFDKFECCWNGSDSVVMTGSYNNFFRMFDRNTKRDITLE 380 (447)
T ss_dssp EES-SEEEEEETTCCSSCS-CCEESCGGGTTTHHHHHHTSGGGCCCCEEECTTSSEEEEECSTTEEEEEETTTCCEEEEE
T ss_pred eeC-CeEEEEeCCCCcccc-ceeeccccccccccccccccccccceEEEECCCCCEEEEeccCCEEEEEEcCCCcceeee
Confidence 999 8 99999987 6655 45666652111 223789999988899999999999999999876421
Q ss_pred ---------------------------------EecCceEEEEECCc--EEEEEecccee
Q psy505 135 ---------------------------------SFSNTILAVKLNRK--KEEEEDEEEEK 159 (161)
Q Consensus 135 ---------------------------------~~~~~V~~v~~~~~--~~vv~~~~~~~ 159 (161)
.+...|..++|+|+ .++++..+.++
T Consensus 381 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~p~~~~la~~~~~~~~ 440 (447)
T 3dw8_B 381 ASRENNKPRTVLKPRKVCASGKRKKDEISVDSLDFNKKILHTAWHPKENIIAVATTNNLY 440 (447)
T ss_dssp CCSTTCCTTCBCCCCCEECSSCCCTTCEEGGGCCTTSCCCEEEECSSSSEEEEECSSCEE
T ss_pred ecccccccccccCCccccccCCcccccccccccccCCceeEEEECCCCCEEEEEecceee
Confidence 23457899999997 67777666654
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-19 Score=139.67 Aligned_cols=142 Identities=13% Similarity=0.172 Sum_probs=115.0
Q ss_pred CCceeEEeecCCC---ceEEEEcCCCCcceEEEEEcCCCC-ceeeeeccCccceeee------------eEEEecCCc-e
Q psy505 13 NPNGICCLCVNSD---NCYLAYPGSNSIGEVQIFDADNLH-AKTMIPAHDSPLAALA------------SLSVGTKSG-Y 75 (161)
Q Consensus 13 ~~~~v~~~~~~~d---~~~la~~g~~~dg~v~iWd~~~~~-~~~~l~~H~~~V~~l~------------~lasgs~dg-i 75 (161)
+...|.+++++|+ |.++++++. ||.|++||+.+++ ++..+.+|.++|.++. +|++|+.|| |
T Consensus 64 ~~~~v~~~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i 141 (357)
T 3i2n_A 64 KAKPIKCGTFGATSLQQRYLATGDF--GGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTV 141 (357)
T ss_dssp ESSCEEEEECTTCCTTTCCEEEEET--TSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCE
T ss_pred ccCcEEEEEEcCCCCCCceEEEecC--CCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeE
Confidence 4557899999998 688988776 9999999999988 8999999999999992 899999999 9
Q ss_pred EEEEeCCcCceeeEEeecCc--ceEEEEEe----ecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECC--
Q psy505 76 RLFSLNSIDTLEQIYENSQE--DVCIVERL----FSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNR-- 147 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~--~~~v~~~~----fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~-- 147 (161)
++||+++++.....+..|.+ ...+.++. |+|++..+++++.|+.|++||+++++++....+...|.+++|+|
T Consensus 142 ~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~v~~~~~~~~~ 221 (357)
T 3i2n_A 142 KVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWETNIKNGVCSLEFDRKD 221 (357)
T ss_dssp EEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEESCSS
T ss_pred EEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeecCCCCceEEEEcCCCC
Confidence 99999987633345544432 22456666 78888888888889999999999999877777889999999998
Q ss_pred ---cEEEEEecc
Q psy505 148 ---KKEEEEDEE 156 (161)
Q Consensus 148 ---~~~vv~~~~ 156 (161)
+.+++...+
T Consensus 222 ~~~~~l~~~~~d 233 (357)
T 3i2n_A 222 ISMNKLVATSLE 233 (357)
T ss_dssp SSCCEEEEEEST
T ss_pred CCCCEEEEECCC
Confidence 356666544
|
| >4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a | Back alignment and structure |
|---|
Probab=99.82 E-value=6.1e-19 Score=137.32 Aligned_cols=137 Identities=14% Similarity=0.124 Sum_probs=107.5
Q ss_pred CCceeEEeecCC--CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCc
Q psy505 13 NPNGICCLCVNS--DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 13 ~~~~v~~~~~~~--d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~ 83 (161)
+...+..+++++ ...++++++. |+.|++||+++++++..+.+|.++|++++ +|++|+.|| |++||++++
T Consensus 170 ~~~~v~~~~~~~~~~~~~~~s~~~--d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~ 247 (340)
T 4aow_A 170 HSEWVSCVRFSPNSSNPIIVSCGW--DKLVKVWNLANCKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEG 247 (340)
T ss_dssp CSSCEEEEEECSCSSSCEEEEEET--TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTT
T ss_pred ccCcccceEEccCCCCcEEEEEcC--CCEEEEEECCCCceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccC
Confidence 334455555544 4566777665 99999999999999999999999999998 899999999 999999987
Q ss_pred CceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE----------ecCceEEEEECCc--EEE
Q psy505 84 DTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS----------FSNTILAVKLNRK--KEE 151 (161)
Q Consensus 84 ~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~----------~~~~V~~v~~~~~--~~v 151 (161)
+++ ..+.++. .+..+.|+|+...++++ .|++|+|||++++.++.++. +...|.+++|+|+ .++
T Consensus 248 ~~~-~~~~~~~---~v~~~~~~~~~~~~~~~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~ 322 (340)
T 4aow_A 248 KHL-YTLDGGD---IINALCFSPNRYWLCAA-TGPSIKIWDLEGKIIVDELKQEVISTSSKAEPPQCTSLAWSADGQTLF 322 (340)
T ss_dssp EEE-EEEECSS---CEEEEEECSSSSEEEEE-ETTEEEEEETTTTEEEEEECCC-------CCCCCEEEEEECTTSSEEE
T ss_pred cee-eeecCCc---eEEeeecCCCCceeecc-CCCEEEEEECCCCeEEEeccccceeeeccCCCCCEEEEEECCCCCEEE
Confidence 765 3444443 36788899988766654 67899999999988776653 3568999999998 566
Q ss_pred EEecc
Q psy505 152 EEDEE 156 (161)
Q Consensus 152 v~~~~ 156 (161)
....|
T Consensus 323 sgs~D 327 (340)
T 4aow_A 323 AGYTD 327 (340)
T ss_dssp EEETT
T ss_pred EEeCC
Confidence 66555
|
| >3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A | Back alignment and structure |
|---|
Probab=99.82 E-value=4.9e-20 Score=148.10 Aligned_cols=124 Identities=11% Similarity=0.151 Sum_probs=103.8
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
+....++|++.++|+++. ||.|++||+.++++...+.+|.++|++++ +|++|+.|| |++||+++++.+ ..
T Consensus 100 ~~~~~~~~~~~~l~~~~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~-~~ 176 (420)
T 3vl1_A 100 TAVDTAKLQMRRFILGTT--EGDIKVLDSNFNLQREIDQAHVSEITKLKFFPSGEALISSSQDMQLKIWSVKDGSNP-RT 176 (420)
T ss_dssp EEEEEECSSSCEEEEEET--TSCEEEECTTSCEEEEETTSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCCC-EE
T ss_pred eEEEEEecCCCEEEEEEC--CCCEEEEeCCCcceeeecccccCccEEEEECCCCCEEEEEeCCCeEEEEeCCCCcCc-eE
Confidence 444466889999998776 99999999999999998999999999999 899999999 999999998766 45
Q ss_pred EeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe----cCceEEEEE
Q psy505 90 YENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF----SNTILAVKL 145 (161)
Q Consensus 90 ~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~----~~~V~~v~~ 145 (161)
+.+|... +.+++|+|++..+++++.|++|++||+++++++..+.. ...|.++.|
T Consensus 177 ~~~h~~~--v~~~~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 177 LIGHRAT--VTDIAIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EECCSSC--EEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred EcCCCCc--EEEEEEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEE
Confidence 6777654 77889999888888888899999999999999888862 234554444
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-19 Score=146.38 Aligned_cols=141 Identities=7% Similarity=0.081 Sum_probs=114.1
Q ss_pred CCceeEEeecCCC---ceEEEEcCCCCcceEEEEEcCCCCceee-eeccCccceeee-----eEEEecCCc-eEEEEeCC
Q psy505 13 NPNGICCLCVNSD---NCYLAYPGSNSIGEVQIFDADNLHAKTM-IPAHDSPLAALA-----SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 13 ~~~~v~~~~~~~d---~~~la~~g~~~dg~v~iWd~~~~~~~~~-l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~ 82 (161)
+...|.+++++|+ +.++++++. ||+|++||+.+++++.. +.+|.++|++++ +|++|+.|+ |++||+++
T Consensus 194 h~~~v~~~~~sp~~~~~~~l~s~~~--d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l~s~~~d~~v~vwd~~~ 271 (450)
T 2vdu_B 194 HVSMLTDVHLIKDSDGHQFIITSDR--DEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLLLSAGGDDKIFAWDWKT 271 (450)
T ss_dssp CSSCEEEEEEEECTTSCEEEEEEET--TSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEEEEEESSSEEEEEETTT
T ss_pred ccCceEEEEEcCCCCCCcEEEEEcC--CCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEEEEEeCCCeEEEEECCC
Confidence 3456889999999 989998776 99999999999998887 669999999998 799999999 99999999
Q ss_pred cCceeeEEeec-----------------------CcceEEEEEeecCCeEEEEecC-CCCeEEEEec--CCC---CeEEE
Q psy505 83 IDTLEQIYENS-----------------------QEDVCIVERLFSSSLVAVVSLS-SPRKLTVCHF--KRG---SEICN 133 (161)
Q Consensus 83 ~~~~~~~~~~~-----------------------~~~~~v~~~~fs~~~~~~~s~~-~d~~i~iWD~--~~~---~~i~~ 133 (161)
++++.. +..+ .....+..++|+|++..+++++ .|+.|+|||+ .++ +++..
T Consensus 272 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~~~~~~~~l~~~~~ 350 (450)
T 2vdu_B 272 GKNLST-FDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEMSEKQKGDLALKQI 350 (450)
T ss_dssp CCEEEE-EECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEECSSSTTCEEEEEE
T ss_pred CcEeee-ecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEeccCCCCceeeccE
Confidence 886643 3321 1123577889999876666554 7899999999 666 66666
Q ss_pred EEecCceEEEEECCcEEEEEecc
Q psy505 134 YSFSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 134 l~~~~~V~~v~~~~~~~vv~~~~ 156 (161)
+..+..|.+++|+|++++++..+
T Consensus 351 ~~~~~~v~~~~~~~~~~~v~~~~ 373 (450)
T 2vdu_B 351 ITFPYNVISLSAHNDEFQVTLDN 373 (450)
T ss_dssp EECSSCEEEEEEETTEEEEEECC
T ss_pred eccCCceEEEEecCCcEEEEEec
Confidence 77668999999999988888755
|
| >3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=3.5e-19 Score=139.39 Aligned_cols=140 Identities=11% Similarity=0.180 Sum_probs=111.6
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------eEEEecCCc-eEEEEeCCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd~~~~ 83 (161)
+...|.+++++|++.++++++. ||.|++||+.+++.+. +.+|..+|++++ +|++|+.|| |++||++++
T Consensus 85 h~~~v~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~-~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 161 (368)
T 3mmy_A 85 HTGPVLDVCWSDDGSKVFTASC--DKTAKMWDLSSNQAIQ-IAQHDAPVKTIHWIKAPNYSCVMTGSWDKTLKFWDTRSS 161 (368)
T ss_dssp CSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTTEEEE-EEECSSCEEEEEEEECSSCEEEEEEETTSEEEEECSSCS
T ss_pred ccCCEEEEEECcCCCEEEEEcC--CCcEEEEEcCCCCcee-eccccCceEEEEEEeCCCCCEEEEccCCCcEEEEECCCC
Confidence 4456899999999999998776 9999999999987765 678999999987 599999999 999999876
Q ss_pred CceeeEE-------------------------------------------------------------------------
Q psy505 84 DTLEQIY------------------------------------------------------------------------- 90 (161)
Q Consensus 84 ~~~~~~~------------------------------------------------------------------------- 90 (161)
+++..+.
T Consensus 162 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~ 241 (368)
T 3mmy_A 162 NPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVA 241 (368)
T ss_dssp SCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEE
T ss_pred cEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEE
Confidence 5432110
Q ss_pred ----------------eecCcc----------eEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEE
Q psy505 91 ----------------ENSQED----------VCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAV 143 (161)
Q Consensus 91 ----------------~~~~~~----------~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v 143 (161)
.+|... ..+.+++|+|++..+++++.|+.|+|||+++++++..+. +...|.++
T Consensus 242 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~ 321 (368)
T 3mmy_A 242 IHYINPPNPAKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDARTKLKTSEQLDQPISAC 321 (368)
T ss_dssp EEESSCSCHHHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCCCSSCEEEE
T ss_pred EEecCCCCccccceeeeeeecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCCCcEEEEecCCCCCceEE
Confidence 111100 037789999998888888889999999999999998886 57899999
Q ss_pred EECCc--EEEEEec
Q psy505 144 KLNRK--KEEEEDE 155 (161)
Q Consensus 144 ~~~~~--~~vv~~~ 155 (161)
+|+|+ .++++..
T Consensus 322 ~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 322 CFNHNGNIFAYASS 335 (368)
T ss_dssp EECTTSSCEEEEEC
T ss_pred EECCCCCeEEEEec
Confidence 99998 4665544
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=9.5e-19 Score=135.05 Aligned_cols=142 Identities=15% Similarity=0.188 Sum_probs=117.7
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eE
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YR 76 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-ir 76 (161)
++++++ ..+.+...|.+++++|+|.++|+++. ||+|+|||+++++++..+.+|...+.+++ ++++|+.++ ++
T Consensus 56 ~~~~~~-~~~~~~~~V~~v~~~~~~~~l~sgs~--Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~~l~s~~~~~~~~ 132 (318)
T 4ggc_A 56 DILQLL-QMEQPGEYISSVAWIKEGNYLAVGTS--SAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSYILSSGSRSGHIH 132 (318)
T ss_dssp CEEEEE-ECCSTTCCEEEEEECTTSSEEEEEET--TSEEEEEETTTTEEEEEEECCSSCEEEEEEETTEEEEEETTSEEE
T ss_pred CEEEEE-EecCCCCeEEEEEECCCCCEEEEEEC--CCcEEEeecCCceeEEEecCccceEEEeecCCCEEEEEecCCceE
Confidence 456677 56667777999999999999999776 99999999999999999999999999888 999999999 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEE----EE-EecCceEEEEECCc
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEIC----NY-SFSNTILAVKLNRK 148 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~----~l-~~~~~V~~v~~~~~ 148 (161)
+|+..++......+.+|... +..+.|++++..+++++.|++|+|||+++++... .. .+.+.|.++.++|+
T Consensus 133 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~ 207 (318)
T 4ggc_A 133 HHDVRVAEHHVATLSGHSQE--VCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPW 207 (318)
T ss_dssp EEETTSSSCEEEEEECCSSC--EEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTT
T ss_pred eeecCCCceeEEEEcCccCc--eEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceEEEEecCC
Confidence 99998876555666777654 6677888888888888899999999999876432 22 24578999999875
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.82 E-value=1.3e-18 Score=141.97 Aligned_cols=143 Identities=14% Similarity=0.232 Sum_probs=113.7
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eE
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YR 76 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-ir 76 (161)
++++++ .. +...+.++++ ++.++++++. ||.|++||+++++++..+.+|...+.+++ +|++|+.|| |+
T Consensus 270 ~~~~~~-~~--~~~~v~~~~~--~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~ 342 (445)
T 2ovr_B 270 TCLHTL-QG--HTNRVYSLQF--DGIHVVSGSL--DTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVK 342 (445)
T ss_dssp EEEEEE-CC--CSSCEEEEEE--CSSEEEEEET--TSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEE
T ss_pred cEeEEe-cC--CCCceEEEEE--CCCEEEEEeC--CCeEEEEECCCCCEEEEEcCCcccEEEEEEeCCEEEEEeCCCeEE
Confidence 345566 33 3445888888 7788888776 99999999999999999999999999998 999999999 99
Q ss_pred EEEeCCcCceeeEEeecC-cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE------ecCceEEEEECCcE
Q psy505 77 LFSLNSIDTLEQIYENSQ-EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS------FSNTILAVKLNRKK 149 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~-~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~------~~~~V~~v~~~~~~ 149 (161)
+||+++++++. .+.++. +...+.+++|+++.+ ++++.|++|+|||+++++.+..+. +.+.|.+++|+|++
T Consensus 343 vwd~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~l--~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~ 419 (445)
T 2ovr_B 343 IWDIKTGQCLQ-TLQGPNKHQSAVTCLQFNKNFV--ITSSDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTK 419 (445)
T ss_dssp EEETTTCCEEE-EECSTTSCSSCEEEEEECSSEE--EEEETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSE
T ss_pred EEECCCCcEEE-EEccCCCCCCCEEEEEECCCEE--EEEeCCCeEEEEECCCCceeeeeeccccCCCCceEEEEEecCCE
Confidence 99999988663 444421 223477888987764 444578999999999999998882 45789999999997
Q ss_pred EEEEe
Q psy505 150 EEEED 154 (161)
Q Consensus 150 ~vv~~ 154 (161)
..++.
T Consensus 420 ~~la~ 424 (445)
T 2ovr_B 420 LVCAV 424 (445)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 66554
|
| >2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B* | Back alignment and structure |
|---|
Probab=99.82 E-value=9.8e-19 Score=142.62 Aligned_cols=144 Identities=9% Similarity=0.087 Sum_probs=117.0
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEE
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRL 77 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iri 77 (161)
..+.+ ..|.... +.++++ +|.++++++. ||+|++||+.+++++..+.+|.++|++++ ++++|+.|| |++
T Consensus 110 ~~~~l-~~h~~~v-~~~~~~--~g~~l~sg~~--dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~~l~s~~~dg~i~v 183 (445)
T 2ovr_B 110 SPKVL-KGHDDHV-ITCLQF--CGNRIVSGSD--DNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKV 183 (445)
T ss_dssp CCEEE-ECSTTSC-EEEEEE--ETTEEEEEET--TSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCEEE
T ss_pred eeEEe-cccCCCc-EEEEEE--cCCEEEEEEC--CCcEEEEECCCCcEEEEEcCCCCCEEEEEecCCEEEEEeCCCeEEE
Confidence 34555 4544432 456666 6788998776 99999999999999999999999999999 999999999 999
Q ss_pred EEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEecc
Q psy505 78 FSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~ 156 (161)
||+++++.. ..+.+|... +.++.|+++.++ +++.|++|++||+++++++..+. +...|.++.|+++.+++...+
T Consensus 184 wd~~~~~~~-~~~~~h~~~--v~~~~~~~~~l~--s~s~dg~i~~wd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 258 (445)
T 2ovr_B 184 WNAETGECI-HTLYGHTST--VRCMHLHEKRVV--SGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYD 258 (445)
T ss_dssp EETTTTEEE-EEECCCSSC--EEEEEEETTEEE--EEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETT
T ss_pred EECCcCcEE-EEECCCCCc--EEEEEecCCEEE--EEeCCCEEEEEECCCCcEEEEEcCCcccEEEEEECCCEEEEEcCC
Confidence 999998765 456677654 667888888754 44568999999999999998886 678999999998888888766
Q ss_pred c
Q psy505 157 E 157 (161)
Q Consensus 157 ~ 157 (161)
.
T Consensus 259 g 259 (445)
T 2ovr_B 259 F 259 (445)
T ss_dssp S
T ss_pred C
Confidence 3
|
| >2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=7.4e-19 Score=144.05 Aligned_cols=146 Identities=10% Similarity=0.092 Sum_probs=118.3
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee----eeeccCccceeee---------eEEE
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT----MIPAHDSPLAALA---------SLSV 69 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~----~l~~H~~~V~~l~---------~las 69 (161)
++.++ ..+.++..+.+++++|+|.+|++++. ||.|++||+.+++... .+.+|.++|++++ +|++
T Consensus 139 ~~~~~-~~~~~~~~v~~~~~sp~~~~l~~~~~--~g~v~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s 215 (450)
T 2vdu_B 139 VLKLR-KRFCFSKRPNAISIAEDDTTVIIADK--FGDVYSIDINSIPEEKFTQEPILGHVSMLTDVHLIKDSDGHQFIIT 215 (450)
T ss_dssp CEEEE-EEEECSSCEEEEEECTTSSEEEEEET--TSEEEEEETTSCCCSSCCCCCSEECSSCEEEEEEEECTTSCEEEEE
T ss_pred eeeee-ecccCCCCceEEEEcCCCCEEEEEeC--CCcEEEEecCCcccccccceeeecccCceEEEEEcCCCCCCcEEEE
Confidence 44555 33455677999999999999998765 8999999999887554 8899999999886 6899
Q ss_pred ecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec-----------
Q psy505 70 GTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS----------- 137 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~----------- 137 (161)
|+.|+ |++||+++++.+..++.+|... +.+++|+ ++..+++++.|++|+|||+++++++..+...
T Consensus 216 ~~~d~~i~vwd~~~~~~~~~~~~~h~~~--v~~~~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 292 (450)
T 2vdu_B 216 SDRDEHIKISHYPQCFIVDKWLFGHKHF--VSSICCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTFDYNSLIKPYLNDQH 292 (450)
T ss_dssp EETTSCEEEEEESCTTCEEEECCCCSSC--EEEEEEC-STTEEEEEESSSEEEEEETTTCCEEEEEECHHHHGGGCCTTS
T ss_pred EcCCCcEEEEECCCCceeeeeecCCCCc--eEEEEEC-CCCEEEEEeCCCeEEEEECCCCcEeeeecchhhhhhhhhhcc
Confidence 99999 9999999988765556677654 6777888 7777888888999999999999999888632
Q ss_pred ---------------CceEEEEECCc--EEEEEe
Q psy505 138 ---------------NTILAVKLNRK--KEEEED 154 (161)
Q Consensus 138 ---------------~~V~~v~~~~~--~~vv~~ 154 (161)
..|.++.|+|+ .+++..
T Consensus 293 ~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~ 326 (450)
T 2vdu_B 293 LAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFV 326 (450)
T ss_dssp BC----------CBCCCEEEEEECSSSSEEEEEE
T ss_pred cccccccccccccceEEEEEEEEeCCCCEEEEEE
Confidence 46889999987 455554
|
| >3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=1.8e-19 Score=145.61 Aligned_cols=139 Identities=13% Similarity=0.162 Sum_probs=108.6
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-----------ceeeeeccC------------ccceeee----
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-----------AKTMIPAHD------------SPLAALA---- 65 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-----------~~~~l~~H~------------~~V~~l~---- 65 (161)
+...|.+++++|+|.+||+++. ||.|+|||+.+++ +...+++|. ++|.+++
T Consensus 27 ~~~~V~~v~~s~~g~~la~g~~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~ 104 (447)
T 3dw8_B 27 EADIISTVEFNHSGELLATGDK--GGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ 104 (447)
T ss_dssp GGGSEEEEEECSSSSEEEEEET--TSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC
T ss_pred ccCcEEEEEECCCCCEEEEEcC--CCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC
Confidence 3567999999999999999776 9999999999887 578899998 8899998
Q ss_pred ----eEEEecCCc-eEEEEeCCcCce---------------------------------------eeEEeecCcceEEEE
Q psy505 66 ----SLSVGTKSG-YRLFSLNSIDTL---------------------------------------EQIYENSQEDVCIVE 101 (161)
Q Consensus 66 ----~lasgs~dg-iriwd~~~~~~~---------------------------------------~~~~~~~~~~~~v~~ 101 (161)
+|++|+.|| |++||+.+++.. ..+..+|.. .|.+
T Consensus 105 ~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~--~v~~ 182 (447)
T 3dw8_B 105 KNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTY--HINS 182 (447)
T ss_dssp CSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSS--CCCE
T ss_pred CCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCc--ceEE
Confidence 589999999 999999764321 011245654 4678
Q ss_pred EeecCCeEEEEecCCCCeEEEEecCC-CCeEEEE--------EecCceEEEEECCcE---EEEEecc
Q psy505 102 RLFSSSLVAVVSLSSPRKLTVCHFKR-GSEICNY--------SFSNTILAVKLNRKK---EEEEDEE 156 (161)
Q Consensus 102 ~~fs~~~~~~~s~~~d~~i~iWD~~~-~~~i~~l--------~~~~~V~~v~~~~~~---~vv~~~~ 156 (161)
++|+|++..++++ .|++|+|||+++ ++++..+ .|...|.+++|+|+. ++....+
T Consensus 183 ~~~~~~~~~l~s~-~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~p~~~~~l~s~~~d 248 (447)
T 3dw8_B 183 ISINSDYETYLSA-DDLRINLWHLEITDRSFNIVDIKPANMEELTEVITAAEFHPNSCNTFVYSSSK 248 (447)
T ss_dssp EEECTTSSEEEEE-CSSEEEEEETTEEEEEEEEEECCCSSGGGCCCCEEEEEECSSCTTEEEEEETT
T ss_pred EEEcCCCCEEEEe-CCCeEEEEECCCCCceeeeeecccccccccCcceEEEEECCCCCcEEEEEeCC
Confidence 8999999888888 799999999994 5555543 256789999999974 6665554
|
| >3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A* | Back alignment and structure |
|---|
Probab=99.82 E-value=3.2e-19 Score=161.27 Aligned_cols=148 Identities=16% Similarity=0.185 Sum_probs=122.5
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------eEEEecCCc
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------SLSVGTKSG 74 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~lasgs~dg 74 (161)
+++++ . .+...|.+++++|||.++|+++. ||+|+|||+.+++++..+.+|..+|++++ ++++|+.||
T Consensus 649 ~~~~~-~--~h~~~v~~~~~s~~~~~l~s~~~--d~~v~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~sg~~d~ 723 (1249)
T 3sfz_A 649 KLLDI-K--AHEDEVLCCAFSSDDSYIATCSA--DKKVKIWDSATGKLVHTYDEHSEQVNCCHFTNKSNHLLLATGSNDF 723 (1249)
T ss_dssp EEEEE-C--CCSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSCCEEEEEETTS
T ss_pred EEEEe-c--cCCCCEEEEEEecCCCEEEEEeC--CCeEEEEECCCCceEEEEcCCCCcEEEEEEecCCCceEEEEEeCCC
Confidence 45556 3 34556999999999999999776 99999999999999999999999999998 789999999
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec--------------Cc
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS--------------NT 139 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~--------------~~ 139 (161)
|++||++++++. ..+.+|.+. +.+++|+|++..+++++.|++|++||+++++....+... ..
T Consensus 724 ~v~vwd~~~~~~~-~~~~~h~~~--v~~~~~sp~~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 800 (1249)
T 3sfz_A 724 FLKLWDLNQKECR-NTMFGHTNS--VNHCRFSPDDELLASCSADGTLRLWDVRSANERKSINVKRFFLSSEDPPEDVEVI 800 (1249)
T ss_dssp CEEEEETTSSSEE-EEECCCSSC--EEEEEECSSTTEEEEEESSSEEEEEEGGGTEEEEEEECCCCC--------CCCCC
T ss_pred eEEEEECCCcchh-heecCCCCC--EEEEEEecCCCEEEEEECCCeEEEEeCCCCcccceecccccccccCCccccccce
Confidence 999999998765 456677654 778899999888888889999999999999888776532 26
Q ss_pred eEEEEECCc--EEEEEeccce
Q psy505 140 ILAVKLNRK--KEEEEDEEEE 158 (161)
Q Consensus 140 V~~v~~~~~--~~vv~~~~~~ 158 (161)
|.++.|+|+ .++++..+.+
T Consensus 801 v~~~~~s~dg~~l~~~~~~~v 821 (1249)
T 3sfz_A 801 VKCCSWSADGDKIIVAAKNKV 821 (1249)
T ss_dssp BCCCCBCTTSSEEEEEETTEE
T ss_pred EEEEEECCCCCEEEEEcCCcE
Confidence 888999997 5555555444
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.82 E-value=2.4e-19 Score=152.97 Aligned_cols=137 Identities=14% Similarity=0.122 Sum_probs=109.8
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCcc-----ceeee------eEEEecCCc-eEEEEeC
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP-----LAALA------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~-----V~~l~------~lasgs~dg-iriwd~~ 81 (161)
...|.+++++|||.+||+++. ||+|+|||..+ ++..+. |..+ |.+++ +||+|++|| |+|||+.
T Consensus 85 ~~~V~~vawSPdG~~LAs~s~--dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSPDG~~LAsgs~DGtVkIWd~~ 159 (588)
T 2j04_A 85 VCYPRVCKPSPIDDWMAVLSN--NGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNPIESSIVVGNEDGELQFFSIR 159 (588)
T ss_dssp SCCEEEEEECSSSSCEEEEET--TSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECSSSSCEEEEETTSEEEEEECC
T ss_pred CCcEEEEEECCCCCEEEEEeC--CCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcCCCCEEEEEcCCCEEEEEECC
Confidence 456999999999999999776 99999999654 777788 8775 88998 999999999 9999998
Q ss_pred CcCc------eeeEE----eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCe---EEEEE--ecCceEEEEEC
Q psy505 82 SIDT------LEQIY----ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE---ICNYS--FSNTILAVKLN 146 (161)
Q Consensus 82 ~~~~------~~~~~----~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~---i~~l~--~~~~V~~v~~~ 146 (161)
++.. ....+ .||.+ +|.+++|+|++ +++++.|++|++||+..+++ ..++. +...|.+|+|+
T Consensus 160 ~~~l~~~~~i~l~ti~~~~~gh~~--~V~sVawSPdg--Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFs 235 (588)
T 2j04_A 160 KNSENTPEFYFESSIRLSDAGSKD--WVTHIVWYEDV--LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIV 235 (588)
T ss_dssp CCTTTCCCCEEEEEEECSCTTCCC--CEEEEEEETTE--EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEE
T ss_pred CCccccccceeeeeeecccccccc--cEEEEEEcCCc--EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEE
Confidence 8752 12343 44543 68899999999 55555799999999998874 35664 46799999999
Q ss_pred CcEEEEEecccee
Q psy505 147 RKKEEEEDEEEEK 159 (161)
Q Consensus 147 ~~~~vv~~~~~~~ 159 (161)
.+.++.+....|+
T Consensus 236 g~~LASa~~~tIk 248 (588)
T 2j04_A 236 DYKVVLTCPGYVH 248 (588)
T ss_dssp TTEEEEECSSEEE
T ss_pred CCEEEEEeCCeEE
Confidence 6688888776665
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.82 E-value=5.1e-20 Score=143.78 Aligned_cols=146 Identities=15% Similarity=0.083 Sum_probs=118.4
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC---ceeeeeccCccceeee-------eEEEe
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH---AKTMIPAHDSPLAALA-------SLSVG 70 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~---~~~~l~~H~~~V~~l~-------~lasg 70 (161)
|+.+... . .+...|.+++++|++.++++++. ||.|+|||+.+++ ....+.+|..+|.+++ +|++|
T Consensus 1 m~~~~~~-~--~h~~~v~~~~~s~~~~~l~~~~~--d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~ 75 (342)
T 1yfq_A 1 MQIVQIE-Q--APKDYISDIKIIPSKSLLLITSW--DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp CEEEECS-S--CCSSCEEEEEEEGGGTEEEEEET--TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEE
T ss_pred Ccceecc-c--CCCCcEEEEEEcCCCCEEEEEcC--CCeEEEEEeCCCCccccceeeeecCCceEEEEECCCCCcEEEEE
Confidence 4455444 3 45567999999999999998776 9999999999887 3566779999999998 48999
Q ss_pred cCCc-eEEEEe-CCcCceeeEEee--cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCC---------CCeEEEEEec
Q psy505 71 TKSG-YRLFSL-NSIDTLEQIYEN--SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR---------GSEICNYSFS 137 (161)
Q Consensus 71 s~dg-iriwd~-~~~~~~~~~~~~--~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~---------~~~i~~l~~~ 137 (161)
+.|| |++||+ ++++. ..+.+ |.. .+.+++|+| +..+++++.|+.|++||+++ ++++..+.+.
T Consensus 76 ~~dg~i~~wd~~~~~~~--~~~~~~~~~~--~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~ 150 (342)
T 1yfq_A 76 TVQGEILKVDLIGSPSF--QALTNNEANL--GICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVK 150 (342)
T ss_dssp ETTSCEEEECSSSSSSE--EECBSCCCCS--CEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSC
T ss_pred cCCCeEEEEEeccCCce--EeccccCCCC--ceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeC
Confidence 9999 999999 88754 45566 765 467888998 55566677899999999998 7777777788
Q ss_pred CceEEEEECCcEEEEEecc
Q psy505 138 NTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 138 ~~V~~v~~~~~~~vv~~~~ 156 (161)
..|.+++|+|+.++++..+
T Consensus 151 ~~v~~~~~~~~~l~~~~~d 169 (342)
T 1yfq_A 151 NKIFTMDTNSSRLIVGMNN 169 (342)
T ss_dssp CCEEEEEECSSEEEEEEST
T ss_pred CceEEEEecCCcEEEEeCC
Confidence 9999999999998888776
|
| >3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A | Back alignment and structure |
|---|
Probab=99.81 E-value=7.9e-19 Score=137.51 Aligned_cols=139 Identities=12% Similarity=0.178 Sum_probs=110.3
Q ss_pred CCceeEEeecCCC----ceEEEEcCCCCcceEEEEEcCCCCceeeeec-----cCccceeee----------eEEEecCC
Q psy505 13 NPNGICCLCVNSD----NCYLAYPGSNSIGEVQIFDADNLHAKTMIPA-----HDSPLAALA----------SLSVGTKS 73 (161)
Q Consensus 13 ~~~~v~~~~~~~d----~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~-----H~~~V~~l~----------~lasgs~d 73 (161)
+...|.+++++|+ ...+++++. +|.|++||+.+++.+..++. |...|.+++ +|++|+.|
T Consensus 17 h~~~v~~i~~~p~~~~~~~~~~~~~~--~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~~d 94 (366)
T 3k26_A 17 HNQPLFGVQFNWHSKEGDPLVFATVG--SNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAGSR 94 (366)
T ss_dssp TCSCEEEEEECTTCCTTSCEEEEEEE--TTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEETT
T ss_pred CCCceEEEEEecccCCCCceEEEECC--CCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEecCC
Confidence 4456888888873 334444444 78999999999888877775 446788887 59999999
Q ss_pred c-eEEEEeCCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEE----EecCceEEEEECC
Q psy505 74 G-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNY----SFSNTILAVKLNR 147 (161)
Q Consensus 74 g-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l----~~~~~V~~v~~~~ 147 (161)
| |++||+++++.+ ..+.+|.. .+.++.|+| ++..+++++.|++|++||+++++.+..+ .+...|.+++|+|
T Consensus 95 g~i~v~d~~~~~~~-~~~~~~~~--~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~ 171 (366)
T 3k26_A 95 GIIRIINPITMQCI-KHYVGHGN--AINELKFHPRDPNLLLSVSKDHALRLWNIQTDTLVAIFGGVEGHRDEVLSADYDL 171 (366)
T ss_dssp CEEEEECTTTCCEE-EEEESCCS--CEEEEEECSSCTTEEEEEETTSCEEEEETTTTEEEEEECSTTSCSSCEEEEEECT
T ss_pred CEEEEEEchhceEe-eeecCCCC--cEEEEEECCCCCCEEEEEeCCCeEEEEEeecCeEEEEecccccccCceeEEEECC
Confidence 9 999999998766 45667765 477889999 7777888888999999999999998888 3678999999998
Q ss_pred c--EEEEEecc
Q psy505 148 K--KEEEEDEE 156 (161)
Q Consensus 148 ~--~~vv~~~~ 156 (161)
+ .++++..+
T Consensus 172 ~~~~l~~~~~d 182 (366)
T 3k26_A 172 LGEKIMSCGMD 182 (366)
T ss_dssp TSSEEEEEETT
T ss_pred CCCEEEEecCC
Confidence 7 56665544
|
| >4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.3e-19 Score=145.89 Aligned_cols=112 Identities=9% Similarity=0.075 Sum_probs=95.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcc----eEEEEEcCCCCc----eeeeeccCccceeee------eEEEecCCc-eEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIG----EVQIFDADNLHA----KTMIPAHDSPLAALA------SLSVGTKSG-YRL 77 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg----~v~iWd~~~~~~----~~~l~~H~~~V~~l~------~lasgs~dg-iri 77 (161)
+...+.+++|+|||..+++++. |+ .+++||+..+.. ...+.+|..+|++++ +||+|+.|+ |+|
T Consensus 218 ~~~~v~~v~fspdg~~l~~~s~--d~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~i 295 (365)
T 4h5i_A 218 KNWSLSKINFIADDTVLIAASL--KKGKGIVLTKISIKSGNTSVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIAL 295 (365)
T ss_dssp TTEEEEEEEEEETTEEEEEEEE--SSSCCEEEEEEEEETTEEEEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEec--CCcceeEEeecccccceecceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEE
Confidence 4556889999999999998765 55 689999887653 456889999999998 999999999 999
Q ss_pred EEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC
Q psy505 78 FSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG 128 (161)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~ 128 (161)
||+++++++..++++|... |.+++||||+..++|++.|++|||||+..+
T Consensus 296 wd~~~~~~~~~~~~gH~~~--V~~v~fSpdg~~laS~S~D~tvrvw~ip~~ 344 (365)
T 4h5i_A 296 VKLKDLSMSKIFKQAHSFA--ITEVTISPDSTYVASVSAANTIHIIKLPLN 344 (365)
T ss_dssp EETTTTEEEEEETTSSSSC--EEEEEECTTSCEEEEEETTSEEEEEECCTT
T ss_pred EECCCCcEEEEecCcccCC--EEEEEECCCCCEEEEEeCCCeEEEEEcCCC
Confidence 9999998776666788754 788999999999999999999999998654
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.81 E-value=4.2e-19 Score=141.42 Aligned_cols=139 Identities=17% Similarity=0.139 Sum_probs=117.8
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCc-eEEEEeCCcCce
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~~ 86 (161)
+...+.+++++|++.++++++. ||.|++||+.+++++..+.+|..+|.+++ ++++++.|| |++||+++++.+
T Consensus 246 ~~~~i~~~~~~~~~~~l~~~~~--d~~i~i~d~~~~~~~~~~~~~~~~i~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~ 323 (425)
T 1r5m_A 246 HHGPISVLEFNDTNKLLLSASD--DGTLRIWHGGNGNSQNCFYGHSQSIVSASWVGDDKVISCSMDGSVRLWSLKQNTLL 323 (425)
T ss_dssp CSSCEEEEEEETTTTEEEEEET--TSCEEEECSSSBSCSEEECCCSSCEEEEEEETTTEEEEEETTSEEEEEETTTTEEE
T ss_pred CCCceEEEEECCCCCEEEEEcC--CCEEEEEECCCCccceEecCCCccEEEEEECCCCEEEEEeCCCcEEEEECCCCcEe
Confidence 3456889999999999998776 99999999999999999999999999998 789999999 999999988755
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC--------------------eEEEEEe-cC--ceEEE
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS--------------------EICNYSF-SN--TILAV 143 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~--------------------~i~~l~~-~~--~V~~v 143 (161)
..+.+|.. .+.+++|+|++..+++++.|+.|++||+++++ ++..+.. .. .|.++
T Consensus 324 -~~~~~~~~--~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 400 (425)
T 1r5m_A 324 -ALSIVDGV--PIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRDGILNPLPIPLYASYQSSQDNDYIFDL 400 (425)
T ss_dssp -EEEECTTC--CEEEEEECTTSSEEEEEETTSCEEEEECHHHHC--------------CEECCEEEEECCTTCCCCEEEE
T ss_pred -EecccCCc--cEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccccccCcccchhhhhhcCcccCCceEEE
Confidence 45566654 47788999998888888889999999999888 7888764 34 99999
Q ss_pred EECCc--EEEEEecc
Q psy505 144 KLNRK--KEEEEDEE 156 (161)
Q Consensus 144 ~~~~~--~~vv~~~~ 156 (161)
+|+|+ .++++..+
T Consensus 401 ~~s~~~~~l~~~~~d 415 (425)
T 1r5m_A 401 SWNCAGNKISVAYSL 415 (425)
T ss_dssp EECTTSSEEEEEESS
T ss_pred EccCCCceEEEEecC
Confidence 99998 56666655
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.5e-19 Score=161.27 Aligned_cols=131 Identities=11% Similarity=0.142 Sum_probs=106.5
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC------------------------------------------
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH------------------------------------------ 49 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~------------------------------------------ 49 (161)
.+...|.+++|+|||.+||+++. ||+|+|||+.+++
T Consensus 486 ~h~~~V~svafspdg~~LAsgs~--DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 563 (902)
T 2oaj_A 486 AKELAVDKISFAAETLELAVSIE--TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQ 563 (902)
T ss_dssp SSSCCEEEEEEETTTTEEEEEET--TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSE
T ss_pred CCCCceeEEEecCCCCeEEEEec--CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCC
Confidence 34457999999999999999776 9999999998763
Q ss_pred ---ceeeeeccCccceeee-----eEEEecCCc-eEEEEeCCcCceee----EE-eecCcceEEEEEeec-----CC---
Q psy505 50 ---AKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSLNSIDTLEQ----IY-ENSQEDVCIVERLFS-----SS--- 107 (161)
Q Consensus 50 ---~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~~~~----~~-~~~~~~~~v~~~~fs-----~~--- 107 (161)
++..+++|.++|++|+ +||+|+.|+ |||||++++..+.. .+ .+|.+ .|.+++|+ ||
T Consensus 564 g~~~~~~l~~h~~~V~svafSpdG~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~--~V~sv~Fs~~~~~~Dg~~ 641 (902)
T 2oaj_A 564 GFMPSTAVHANKGKTSAINNSNIGFVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSA--CVTCIEFVIMEYGDDGYS 641 (902)
T ss_dssp EEEEEEEECCCSCSEEEEEECBTSEEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCC--CEEEEEEEEEECTTSSSE
T ss_pred ccceeEEEEcCCCcEEEEEecCCcEEEEEeCCCcEEEEECCCCeEEEEeehhHhcccccc--ceEEEEEEEEecCCCCCc
Confidence 4678899999999999 999999999 99999977543211 12 25654 57889999 77
Q ss_pred eEEEEecCCCCeEEEEec---CCCCeEEEEE-e-----cCceEEEE-EC
Q psy505 108 LVAVVSLSSPRKLTVCHF---KRGSEICNYS-F-----SNTILAVK-LN 146 (161)
Q Consensus 108 ~~~~~s~~~d~~i~iWD~---~~~~~i~~l~-~-----~~~V~~v~-~~ 146 (161)
+..+++++.|++|++||+ .+|+++..+. + .++|.++. |+
T Consensus 642 ~~~l~sgs~D~tv~~wd~~p~~~g~~~~~~~~~~~~~~~~~v~~i~~~~ 690 (902)
T 2oaj_A 642 SILMVCGTDMGEVITYKILPASGGKFDVQLMDITNVTSKGPIHKIDAFS 690 (902)
T ss_dssp EEEEEEEETTSEEEEEEEEECGGGCEEEEEEEEEECCSSCCCCEEEEEE
T ss_pred ceEEEEEecCCcEEEEEEecCCCCcEEEEecCceecCCCCceEEEEeEe
Confidence 488999999999999999 8899888775 3 36888887 66
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.81 E-value=9.2e-19 Score=137.88 Aligned_cols=132 Identities=14% Similarity=0.092 Sum_probs=109.4
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc----eeeeeccCccceeee------eEEEecCCc-eEEEEe
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA----KTMIPAHDSPLAALA------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~----~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~ 80 (161)
.+...+.+++++|++.++++++. ||.|++||+.+++. .....+|...|.+++ +|++|+.|| +++||+
T Consensus 94 ~~~~~v~~~~~~~~~~~l~~~~~--d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~ 171 (372)
T 1k8k_C 94 RINRAARCVRWAPNEKKFAVGSG--SRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSA 171 (372)
T ss_dssp CCSSCEEEEEECTTSSEEEEEET--TSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEEC
T ss_pred cCCCceeEEEECCCCCEEEEEeC--CCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEc
Confidence 45567999999999999999776 99999999998873 333468999999999 899999999 999995
Q ss_pred C------------------CcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceE
Q psy505 81 N------------------SIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTIL 141 (161)
Q Consensus 81 ~------------------~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~ 141 (161)
+ +++++ ..+.+|.. .+.+++|+|++..+++++.|+.|++||+++++++..+. +..+|.
T Consensus 172 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~v~ 248 (372)
T 1k8k_C 172 YIKEVEERPAPTPWGSKMPFGELM-FESSSSCG--WVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLASETLPLL 248 (372)
T ss_dssp CCTTTSCCCCCBTTBSCCCTTCEE-EECCCCSS--CEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEECSSCCEE
T ss_pred ccccccccccccccccccchhhhe-EecCCCCC--eEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEccCCCCeE
Confidence 4 45544 44556654 47788999998778888889999999999999998887 467999
Q ss_pred EEEECCc
Q psy505 142 AVKLNRK 148 (161)
Q Consensus 142 ~v~~~~~ 148 (161)
+++|+|+
T Consensus 249 ~~~~~~~ 255 (372)
T 1k8k_C 249 AVTFITE 255 (372)
T ss_dssp EEEEEET
T ss_pred EEEEecC
Confidence 9999987
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-18 Score=142.46 Aligned_cols=137 Identities=17% Similarity=0.318 Sum_probs=114.1
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCce
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~ 86 (161)
.+..+|.++++ |+.++++++. ||+|++||+.+++++..+.+|.++|.+++ +|++|+.|| |++||+++++.+
T Consensus 131 ~~~~~v~~~~~--d~~~l~~g~~--dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~sg~~dg~i~vwd~~~~~~~ 206 (435)
T 1p22_A 131 ETSKGVYCLQY--DDQKIVSGLR--DNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEML 206 (435)
T ss_dssp SSCCCEEEEEC--CSSEEEEEES--SSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEE
T ss_pred CCCCcEEEEEE--CCCEEEEEeC--CCeEEEEeCCCCeEEEEEcCCCCcEEEEEECCCEEEEEcCCCeEEEEECCCCcEE
Confidence 34567889887 7889998776 99999999999999999999999999999 999999999 999999998866
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEE---EEE-ecCceEEEEECCcEEEEEeccc
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEIC---NYS-FSNTILAVKLNRKKEEEEDEEE 157 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~---~l~-~~~~V~~v~~~~~~~vv~~~~~ 157 (161)
..+.+|.. .+.++.|+++.+ ++++.|++|++||+++++.+. .+. +...|.++.|+++.++++..+.
T Consensus 207 -~~~~~h~~--~v~~l~~~~~~l--~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~~~dg 276 (435)
T 1p22_A 207 -NTLIHHCE--AVLHLRFNNGMM--VTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSASGDR 276 (435)
T ss_dssp -EEECCCCS--CEEEEECCTTEE--EEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEEETTS
T ss_pred -EEEcCCCC--cEEEEEEcCCEE--EEeeCCCcEEEEeCCCCCCceeeeEecCCCCcEEEEEeCCCEEEEEeCCC
Confidence 45667765 477888998854 444578999999999987663 333 5789999999999998887763
|
| >1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C | Back alignment and structure |
|---|
Probab=99.81 E-value=5.4e-19 Score=139.20 Aligned_cols=140 Identities=11% Similarity=0.151 Sum_probs=112.2
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee------eEEEecCCc-eEEEEeCCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~ 83 (161)
+...|.+++++||+.++|+++. ||.|++||+.+++ ++..+.+|..+|.+++ +|++|+.|| |++||++++
T Consensus 7 ~~~~i~~~~~s~~~~~l~~~~~--d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~ 84 (372)
T 1k8k_C 7 LVEPISCHAWNKDRTQIAICPN--NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGR 84 (372)
T ss_dssp CSSCCCEEEECTTSSEEEEECS--SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETT
T ss_pred cCCCeEEEEECCCCCEEEEEeC--CCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCCCCEEEEEcCCCeEEEEECCCC
Confidence 3456889999999999999776 9999999999987 8899999999999998 899999999 999999887
Q ss_pred CceeeE-EeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCe---EEEEE--ecCceEEEEECCc--EEEEEec
Q psy505 84 DTLEQI-YENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE---ICNYS--FSNTILAVKLNRK--KEEEEDE 155 (161)
Q Consensus 84 ~~~~~~-~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~---i~~l~--~~~~V~~v~~~~~--~~vv~~~ 155 (161)
+..... ..+|.. .+.+++|+|++..+++++.|+.|++||++.++. ...+. +...|.+++|+|+ .+++...
T Consensus 85 ~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~ 162 (372)
T 1k8k_C 85 TWKPTLVILRINR--AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSC 162 (372)
T ss_dssp EEEEEEECCCCSS--CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEET
T ss_pred eeeeeEEeecCCC--ceeEEEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcC
Confidence 533221 234543 477889999988888888899999999998874 23332 4689999999997 4555544
Q ss_pred c
Q psy505 156 E 156 (161)
Q Consensus 156 ~ 156 (161)
+
T Consensus 163 d 163 (372)
T 1k8k_C 163 D 163 (372)
T ss_dssp T
T ss_pred C
Confidence 3
|
| >1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-18 Score=141.01 Aligned_cols=143 Identities=11% Similarity=0.160 Sum_probs=117.0
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEE
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRL 77 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iri 77 (161)
++.++ .. +...|.++++ ++.++++++. ||+|++||+.+++++..+.+|.++|.+++ ++++|+.|| |++
T Consensus 165 ~~~~~-~~--h~~~v~~l~~--~~~~l~sg~~--dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~l~s~s~dg~i~v 237 (435)
T 1p22_A 165 CKRIL-TG--HTGSVLCLQY--DERVIITGSS--DSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAV 237 (435)
T ss_dssp EEEEE-CC--CSSCEEEEEC--CSSEEEEEET--TSCEEEEESSSCCEEEEECCCCSCEEEEECCTTEEEEEETTSCEEE
T ss_pred EEEEE-cC--CCCcEEEEEE--CCCEEEEEcC--CCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCCEEEEeeCCCcEEE
Confidence 44555 33 4456889988 7788998776 99999999999999999999999999999 999999999 999
Q ss_pred EEeCCcCcee--eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEe
Q psy505 78 FSLNSIDTLE--QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 78 wd~~~~~~~~--~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~ 154 (161)
||+++++... ..+.+|... +.++.|.++.++ +++.|++|++||+++++++..+. +...|.++.|+++.+++..
T Consensus 238 wd~~~~~~~~~~~~~~~~~~~--v~~~~~~~~~l~--s~~~dg~i~vwd~~~~~~~~~~~~~~~~v~~~~~~~~~l~~g~ 313 (435)
T 1p22_A 238 WDMASPTDITLRRVLVGHRAA--VNVVDFDDKYIV--SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGS 313 (435)
T ss_dssp EECSSSSCCEEEEEECCCSSC--EEEEEEETTEEE--EEETTSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEE
T ss_pred EeCCCCCCceeeeEecCCCCc--EEEEEeCCCEEE--EEeCCCeEEEEECCcCcEEEEEcCCCCcEEEEEeCCCEEEEEe
Confidence 9998876542 345567654 667778766654 44468899999999999999887 6789999999998888887
Q ss_pred cc
Q psy505 155 EE 156 (161)
Q Consensus 155 ~~ 156 (161)
.+
T Consensus 314 ~d 315 (435)
T 1p22_A 314 SD 315 (435)
T ss_dssp TT
T ss_pred CC
Confidence 66
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.1e-19 Score=143.78 Aligned_cols=140 Identities=14% Similarity=0.199 Sum_probs=114.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC----CCceeeeeccCccceeee-------eEEEecCCc-eEEEEe
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN----LHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~----~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~ 80 (161)
+...+.+++++|++.+|++++. ||.|++||+.+ .+.+..+.+|.++|++++ +|++|+.|| |++||+
T Consensus 66 ~~~~v~~~~~s~~~~~l~~~~~--dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~l~s~~~dg~v~iwd~ 143 (416)
T 2pm9_A 66 VDSKFNDLDWSHNNKIIAGALD--NGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQDNVLASGGNNGEIFIWDM 143 (416)
T ss_dssp CSSCEEEEEECSSSSCEEEEES--SSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSSTTBEEEECSSSCEEBCBT
T ss_pred cCCceEEEEECCCCCeEEEEcc--CCeEEEeecccccccccchhhccCCccceEEEEEcCCCCCEEEEEcCCCeEEEEEC
Confidence 4567999999999999998776 99999999998 458889999999999998 899999999 999999
Q ss_pred CCcC------ceeeE--EeecCcceEEEEEeecCC-eEEEEecCCCCeEEEEecCCCCeEEEEEe-------cCceEEEE
Q psy505 81 NSID------TLEQI--YENSQEDVCIVERLFSSS-LVAVVSLSSPRKLTVCHFKRGSEICNYSF-------SNTILAVK 144 (161)
Q Consensus 81 ~~~~------~~~~~--~~~~~~~~~v~~~~fs~~-~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-------~~~V~~v~ 144 (161)
++++ ..... ..+|.. .+.+++|+|+ ...+++++.|+.|++||+++++++..+.. ...|.+++
T Consensus 144 ~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~ 221 (416)
T 2pm9_A 144 NKCTESPSNYTPLTPGQSMSSVD--EVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVE 221 (416)
T ss_dssp TTTSSCTTTCCCBCCCCSCCSSC--CCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEE
T ss_pred CCCccccccccccccccccCCCC--CeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEeccccccccCCceEEEE
Confidence 8875 22111 234543 4678899998 56677777899999999999999988875 57899999
Q ss_pred ECCc---EEEEEecc
Q psy505 145 LNRK---KEEEEDEE 156 (161)
Q Consensus 145 ~~~~---~~vv~~~~ 156 (161)
|+|+ .+++...+
T Consensus 222 ~~~~~~~~l~~~~~d 236 (416)
T 2pm9_A 222 WHPKNSTRVATATGS 236 (416)
T ss_dssp ECSSCTTEEEEEECC
T ss_pred ECCCCCCEEEEEECC
Confidence 9997 46666555
|
| >2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-19 Score=160.79 Aligned_cols=136 Identities=13% Similarity=0.027 Sum_probs=106.4
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCce--eeee---------ccCccceeee------eEEEecCCc-eEE
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAK--TMIP---------AHDSPLAALA------SLSVGTKSG-YRL 77 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~--~~l~---------~H~~~V~~l~------~lasgs~dg-iri 77 (161)
.+.+++++|||.++|+++. ||+||+||+.++... ..+. +|...|++++ +||+|+.|| |||
T Consensus 437 ~v~sv~~spdg~~laSgs~--DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~DgtV~l 514 (902)
T 2oaj_A 437 TKRQKLPAEYGTAFITGHS--NGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIETGDVVL 514 (902)
T ss_dssp CCCCCCCCSEEEEEEEEET--TSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEETTSCEEE
T ss_pred CCCcccccccCcEEEEecC--CCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEecCcEEEE
Confidence 3556788999999999776 999999999988532 1122 8999999999 999999999 999
Q ss_pred EEeCCcCc--------------------------------------------eeeEEeecCcceEEEEEeecCCeEEEEe
Q psy505 78 FSLNSIDT--------------------------------------------LEQIYENSQEDVCIVERLFSSSLVAVVS 113 (161)
Q Consensus 78 wd~~~~~~--------------------------------------------~~~~~~~~~~~~~v~~~~fs~~~~~~~s 113 (161)
||+.+++. ....+.+|.+. |.+++|||++ .+|+
T Consensus 515 wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~~h~~~--V~svafSpdG-~lAs 591 (902)
T 2oaj_A 515 FKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVHANKGK--TSAINNSNIG-FVGI 591 (902)
T ss_dssp EEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEECCCSCS--EEEEEECBTS-EEEE
T ss_pred EEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEEcCCCc--EEEEEecCCc-EEEE
Confidence 99987631 12345667654 7788999999 8999
Q ss_pred cCCCCeEEEEecCCCCeEEE--E-----EecCceEEEEEC-----Cc-----EEEEEecc
Q psy505 114 LSSPRKLTVCHFKRGSEICN--Y-----SFSNTILAVKLN-----RK-----KEEEEDEE 156 (161)
Q Consensus 114 ~~~d~~i~iWD~~~~~~i~~--l-----~~~~~V~~v~~~-----~~-----~~vv~~~~ 156 (161)
++.|++|+|||++++..+.. + .|.+.|++|+|+ || .++....+
T Consensus 592 gs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D 651 (902)
T 2oaj_A 592 AYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDM 651 (902)
T ss_dssp EETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETT
T ss_pred EeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecC
Confidence 99999999999988876642 2 245779999999 87 45555554
|
| >2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1e-19 Score=147.24 Aligned_cols=120 Identities=8% Similarity=0.094 Sum_probs=90.9
Q ss_pred cceEEecCCCC-CCceeEEeecCCCceEEE-----------EcCCCCcceEEEEEcCCCCceeee-----eccCccceee
Q psy505 2 KVLHTIRDTPP-NPNGICCLCVNSDNCYLA-----------YPGSNSIGEVQIFDADNLHAKTMI-----PAHDSPLAAL 64 (161)
Q Consensus 2 ~~~~~~~~~~~-~~~~v~~~~~~~d~~~la-----------~~g~~~dg~v~iWd~~~~~~~~~l-----~~H~~~V~~l 64 (161)
++++++ +++. ...++++++|+|||.+++ .+|+. |++||+||+.+++++..+ ++|.+.+.+.
T Consensus 214 k~l~tL-~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~-D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg 291 (356)
T 2w18_A 214 QLLKKM-HIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSP-VFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEG 291 (356)
T ss_dssp CEEEEE-ECCC---CCCEEEEEEETTEEEEEEC------------C-CEEEEEEETTTTEEEEEEEECCCTTCCCCEEEE
T ss_pred cEEEEE-cCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCC-CcEEEEEECCCCEEEEEEEeeccCCCcceeEcc
Confidence 578888 5433 456788889999998874 34554 999999999999987766 4887765444
Q ss_pred e----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEec
Q psy505 65 A----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125 (161)
Q Consensus 65 ~----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~ 125 (161)
. ++|+|+.|+ |||||+++|+.+ ..+.+|...+ +..++||||+..++||+.|++|||||+
T Consensus 292 ~~sg~~lASgS~DgTIkIWDl~tGk~l-~tL~gH~~~v-vs~vafSPDG~~LaSGS~D~TIklWd~ 355 (356)
T 2w18_A 292 DVKDHCAAAILTSGTIAIWDLLLGQCT-ALLPPVSDQH-WSFVKWSGTDSHLLAGQKDGNIFVYHY 355 (356)
T ss_dssp EEETTEEEEEETTSCEEEEETTTCSEE-EEECCC--CC-CCEEEECSSSSEEEEECTTSCEEEEEE
T ss_pred ccCCCEEEEEcCCCcEEEEECCCCcEE-EEecCCCCCe-EEEEEECCCCCEEEEEECCCcEEEecC
Confidence 4 689999999 999999999866 5667776431 235789999999999999999999996
|
| >1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A | Back alignment and structure |
|---|
Probab=99.81 E-value=1.8e-18 Score=134.08 Aligned_cols=138 Identities=12% Similarity=0.087 Sum_probs=114.2
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+...+.+++++|++.++++++. ||.|++||+++++.+..+.+|..+|.+++ +|++++.|| |++||+++++.
T Consensus 140 ~~~~i~~~~~~~~~~~l~~~~~--dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~ 217 (337)
T 1gxr_A 140 SAPACYALAISPDSKVCFSCCS--DGNIAVWDLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQ 217 (337)
T ss_dssp SSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEE
T ss_pred CCCceEEEEECCCCCEEEEEeC--CCcEEEEeCCCCceeeeeecccCceEEEEECCCCCEEEEEecCCcEEEEECCCCce
Confidence 3445889999999999998776 99999999999999999999999999998 899999999 99999998775
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEecc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+. .+. +.. .+.+++|+|++..++.++.|+.|++||+++++......+...|.+++|+|+ .+++...+
T Consensus 218 ~~-~~~-~~~--~v~~~~~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d 286 (337)
T 1gxr_A 218 LQ-QHD-FTS--QIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKD 286 (337)
T ss_dssp EE-EEE-CSS--CEEEEEECTTSSEEEEEETTSCEEEEETTSSCEEEECCCSSCEEEEEECTTSSEEEEEETT
T ss_pred Ee-eec-CCC--ceEEEEECCCCCEEEEEcCCCcEEEEECCCCCeEEEcCCccceeEEEECCCCCEEEEecCC
Confidence 53 333 332 377889999988888887889999999999887544457889999999987 45555544
|
| >4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe} | Back alignment and structure |
|---|
Probab=99.81 E-value=2.5e-18 Score=138.84 Aligned_cols=138 Identities=17% Similarity=0.216 Sum_probs=112.7
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEec--CCc-eEEEEeCC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGT--KSG-YRLFSLNS 82 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs--~dg-iriwd~~~ 82 (161)
+...|.+++++|++.++++++. ||.|++||+++++++..+.+|..+|.+++ ++++|+ .|| |++||+++
T Consensus 216 ~~~~v~~~~~~~~~~~l~s~~~--d~~v~iwd~~~~~~~~~~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~ 293 (401)
T 4aez_A 216 HSSEVCGLAWRSDGLQLASGGN--DNVVQIWDARSSIPKFTKTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAAT 293 (401)
T ss_dssp CSSCEEEEEECTTSSEEEEEET--TSCEEEEETTCSSEEEEECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTT
T ss_pred CCCCeeEEEEcCCCCEEEEEeC--CCeEEEccCCCCCccEEecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCC
Confidence 4556999999999999999776 99999999999999999999999999998 777765 788 99999999
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEEEEe--cCCCCeEEEEecCCCCeEEEEE---ecCceEEEEECCc--EEEEEec
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVAVVS--LSSPRKLTVCHFKRGSEICNYS---FSNTILAVKLNRK--KEEEEDE 155 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s--~~~d~~i~iWD~~~~~~i~~l~---~~~~V~~v~~~~~--~~vv~~~ 155 (161)
++++. .+..+. .+.+++|+|++..+++ |+.|+.|+|||+.+++...... +...|.+++|+|+ .++++..
T Consensus 294 ~~~~~-~~~~~~---~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~~~~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~ 369 (401)
T 4aez_A 294 GARVN-TVDAGS---QVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSSGLTKQVDIPAHDTRVLYSALSPDGRILSTAAS 369 (401)
T ss_dssp CCEEE-EEECSS---CEEEEEECSSSSEEEEEECTTTCEEEEEEEETTEEEEEEEEECCSSCCCEEEECTTSSEEEEECT
T ss_pred CCEEE-EEeCCC---cEEEEEECCCCCeEEEEeecCCCcEEEEecCCccceeEEEecCCCCCEEEEEECCCCCEEEEEeC
Confidence 87664 333332 3778899998766666 6689999999999987665543 5689999999998 4555554
Q ss_pred c
Q psy505 156 E 156 (161)
Q Consensus 156 ~ 156 (161)
+
T Consensus 370 d 370 (401)
T 4aez_A 370 D 370 (401)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=7.2e-18 Score=131.92 Aligned_cols=138 Identities=11% Similarity=0.142 Sum_probs=114.9
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC-CCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-LHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
....+.+++++|++.++++++. ||.|++||+.+ ++.+..+.+|..+|.+++ +|++++.|| |++||+++++
T Consensus 174 ~~~~~~~~~~~~~~~~l~~~~~--dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~ 251 (369)
T 3zwl_B 174 GLDAATVAGWSTKGKYIIAGHK--DGKISKYDVSNNYEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQ 251 (369)
T ss_dssp TCCCEEEEEECGGGCEEEEEET--TSEEEEEETTTTTEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCC
T ss_pred CccceeEEEEcCCCCEEEEEcC--CCEEEEEECCCCcEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCc
Confidence 3337889999999999998776 99999999999 788899999999999999 899999999 9999999987
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCC--------------eEEEEecCCCCeEEEEE-ecCceEEEEECCc-
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPR--------------KLTVCHFKRGSEICNYS-FSNTILAVKLNRK- 148 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~--------------~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~- 148 (161)
.+. .+. +.. .+..+.|+|++..++.++.++ .+++||..+++++..+. +.+.|.+++|+|+
T Consensus 252 ~~~-~~~-~~~--~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~v~~~~~s~~~ 327 (369)
T 3zwl_B 252 VLK-KYE-TDC--PLNTAVITPLKEFIILGGGQEAKDVTTTSANEGKFEARFYHKIFEEEIGRVQGHFGPLNTVAISPQG 327 (369)
T ss_dssp EEE-EEE-CSS--CEEEEEECSSSSEEEEEECCC-------------CEEEEEETTTCCEEEEEECCSSCEEEEEECTTS
T ss_pred eee-eec-CCC--CceeEEecCCCceEEEeecCCCceEEEEecCCCcceeEEEecCCCcchhheecccCcEEEEEECCCC
Confidence 653 333 222 367888999887777766666 89999999999998887 6789999999997
Q ss_pred -EEEEEecc
Q psy505 149 -KEEEEDEE 156 (161)
Q Consensus 149 -~~vv~~~~ 156 (161)
.++.+..+
T Consensus 328 ~~l~s~~~d 336 (369)
T 3zwl_B 328 TSYASGGED 336 (369)
T ss_dssp SEEEEEETT
T ss_pred CEEEEEcCC
Confidence 56666544
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.80 E-value=2.7e-18 Score=140.22 Aligned_cols=146 Identities=8% Similarity=0.115 Sum_probs=112.4
Q ss_pred ceEEecCCCCCCceeEEeecCCCce-EEEEcCCCCcceEEEEEcCCCCc-------eeeeeccCccceeee-------eE
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNC-YLAYPGSNSIGEVQIFDADNLHA-------KTMIPAHDSPLAALA-------SL 67 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~-~la~~g~~~dg~v~iWd~~~~~~-------~~~l~~H~~~V~~l~-------~l 67 (161)
++.++ .. +...+++++++|++. ++++++. ||.|++||+.++.. ...+.+|...|.+++ +|
T Consensus 173 ~~~~~-~~--h~~~v~~l~~~~~~~~~l~s~~~--dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~~~~l 247 (430)
T 2xyi_A 173 PDLRL-RG--HQKEGYGLSWNPNLNGYLLSASD--DHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLHESLF 247 (430)
T ss_dssp CSEEE-EC--CSSCCCCEEECTTSTTEEEEECT--TSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSCTTEE
T ss_pred CcEEe-cC--CCCCeEEEEeCCCCCCeEEEEeC--CCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCCCCEE
Confidence 34455 33 334578899999888 8888665 99999999998432 466789999999998 89
Q ss_pred EEecCCc-eEEEEeCCcC---ceeeEEeecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecCC-CCeEEEEE-ecCce
Q psy505 68 SVGTKSG-YRLFSLNSID---TLEQIYENSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKR-GSEICNYS-FSNTI 140 (161)
Q Consensus 68 asgs~dg-iriwd~~~~~---~~~~~~~~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~-~~~i~~l~-~~~~V 140 (161)
++|+.|| |++||++++. ++ ..+..|.. .+.+++|+|++. .+++++.|++|+|||+++ ++++..+. +...|
T Consensus 248 ~s~~~dg~i~i~d~~~~~~~~~~-~~~~~~~~--~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~~h~~~v 324 (430)
T 2xyi_A 248 GSVADDQKLMIWDTRNNNTSKPS-HTVDAHTA--EVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFESHKDEI 324 (430)
T ss_dssp EEEETTSEEEEEETTCSCSSSCS-EEEECCSS--CEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEECCSSCE
T ss_pred EEEeCCCeEEEEECCCCCCCcce-eEeecCCC--CeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEeecCCCCE
Confidence 9999999 9999999863 33 34556654 377889999774 566777889999999998 56677776 67899
Q ss_pred EEEEECCcE---EEEEecc
Q psy505 141 LAVKLNRKK---EEEEDEE 156 (161)
Q Consensus 141 ~~v~~~~~~---~vv~~~~ 156 (161)
.+++|+|+. ++....+
T Consensus 325 ~~i~~sp~~~~~l~s~~~d 343 (430)
T 2xyi_A 325 FQVQWSPHNETILASSGTD 343 (430)
T ss_dssp EEEEECSSCTTEEEEEETT
T ss_pred EEEEECCCCCCEEEEEeCC
Confidence 999999974 5555433
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=6.2e-18 Score=129.96 Aligned_cols=135 Identities=14% Similarity=0.144 Sum_probs=110.0
Q ss_pred CceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeec-cCccceeee-----eEEEecCCc-eEEEEeCCcCc
Q psy505 14 PNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA-HDSPLAALA-----SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 14 ~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~-H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~ 85 (161)
...+.++++.| ++..+++++. ||.|++|| .++....+.. |..+|.+++ .+++|+.|| |++||++++++
T Consensus 142 ~~~v~~~~~~~~~~~~l~~~~~--d~~i~i~d--~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~dg~i~i~d~~~~~~ 217 (313)
T 3odt_A 142 NASVWDAKVVSFSENKFLTASA--DKTIKLWQ--NDKVIKTFSGIHNDVVRHLAVVDDGHFISCSNDGLIKLVDMHTGDV 217 (313)
T ss_dssp SSCEEEEEEEETTTTEEEEEET--TSCEEEEE--TTEEEEEECSSCSSCEEEEEEEETTEEEEEETTSEEEEEETTTCCE
T ss_pred CCceeEEEEccCCCCEEEEEEC--CCCEEEEe--cCceEEEEeccCcccEEEEEEcCCCeEEEccCCCeEEEEECCchhh
Confidence 34577777776 8888888776 99999999 5577788887 999999998 788999999 99999999876
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-cCceEEEEECCc-EEEEEecc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-SNTILAVKLNRK-KEEEEDEE 156 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~-~~vv~~~~ 156 (161)
+ ..+.+|.. .+.+++|+|++. +++++.|+.|++||+++++++..+.. ...|.++.|+|+ .++++..+
T Consensus 218 ~-~~~~~~~~--~i~~~~~~~~~~-l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~d 286 (313)
T 3odt_A 218 L-RTYEGHES--FVYCIKLLPNGD-IVSCGEDRTVRIWSKENGSLKQVITLPAISIWSVDCMSNGDIIVGSSD 286 (313)
T ss_dssp E-EEEECCSS--CEEEEEECTTSC-EEEEETTSEEEEECTTTCCEEEEEECSSSCEEEEEECTTSCEEEEETT
T ss_pred h-hhhhcCCc--eEEEEEEecCCC-EEEEecCCEEEEEECCCCceeEEEeccCceEEEEEEccCCCEEEEeCC
Confidence 6 45567765 477889999984 66677899999999999999988874 579999999998 44444443
|
| >3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=3.1e-18 Score=134.72 Aligned_cols=132 Identities=11% Similarity=0.128 Sum_probs=106.1
Q ss_pred CCceeEEeecCCC--ceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee--------eEEEecCCc-eEEEE
Q psy505 13 NPNGICCLCVNSD--NCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 13 ~~~~v~~~~~~~d--~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd 79 (161)
+...|.+++++|+ +.++++++. ||.|++||+.+++ .+..+.+|..+|.+++ +|++|+.|| |++||
T Consensus 54 h~~~v~~~~~~~~~~~~~l~s~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d 131 (379)
T 3jrp_A 54 HEGPVWRVDWAHPKFGTILASCSY--DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE 131 (379)
T ss_dssp CSSCEEEEEECCGGGCSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEE
T ss_pred CCCcEEEEEeCCCCCCCEEEEecc--CCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEe
Confidence 4456888888876 889998776 9999999999987 7788899999999998 699999999 99999
Q ss_pred eCCcCcee-eEEeecCcceEEEEEeecC-------------CeEEEEecCCCCeEEEEecCCCCeE----EEEE-ecCce
Q psy505 80 LNSIDTLE-QIYENSQEDVCIVERLFSS-------------SLVAVVSLSSPRKLTVCHFKRGSEI----CNYS-FSNTI 140 (161)
Q Consensus 80 ~~~~~~~~-~~~~~~~~~~~v~~~~fs~-------------~~~~~~s~~~d~~i~iWD~~~~~~i----~~l~-~~~~V 140 (161)
++++.... ..+.+|.. .+.+++|+| ++..+++++.|+.|++||+++++.. ..+. |.+.|
T Consensus 132 ~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~h~~~v 209 (379)
T 3jrp_A 132 FKENGTTSPIIIDAHAI--GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLEGHSDWV 209 (379)
T ss_dssp CCTTSCCCEEEEECCTT--CEEEEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEECCCSSCE
T ss_pred cCCCCceeeEEecCCCC--ceEEEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEecccCcE
Confidence 98874322 23445654 477889998 5677777778999999999887633 3343 56899
Q ss_pred EEEEECCc
Q psy505 141 LAVKLNRK 148 (161)
Q Consensus 141 ~~v~~~~~ 148 (161)
.+++|+|+
T Consensus 210 ~~~~~sp~ 217 (379)
T 3jrp_A 210 RDVAWSPT 217 (379)
T ss_dssp EEEEECCC
T ss_pred eEEEECCC
Confidence 99999987
|
| >3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A | Back alignment and structure |
|---|
Probab=99.80 E-value=1.7e-18 Score=149.83 Aligned_cols=147 Identities=11% Similarity=0.110 Sum_probs=121.4
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-e
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-Y 75 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-i 75 (161)
++.++ .. +...|.+++++|++.+||+++. ||.|++||+.+++.+..+.+|.++|++++ +|++|+.|| |
T Consensus 47 ~~~~~-~~--~~~~v~~~~~s~~~~~l~~~~~--dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i 121 (814)
T 3mkq_A 47 EVRSI-QV--TETPVRAGKFIARKNWIIVGSD--DFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPTKPYVLSGSDDLTV 121 (814)
T ss_dssp EEEEE-EC--CSSCEEEEEEEGGGTEEEEEET--TSEEEEEETTTCCEEEEEECCSSCEEEEEECSSSSEEEEEETTSEE
T ss_pred eEEEE-ec--CCCcEEEEEEeCCCCEEEEEeC--CCeEEEEECCCCcEEEEEecCCCCEEEEEEeCCCCEEEEEcCCCEE
Confidence 44555 33 4445889999999999999776 99999999999999999999999999999 899999999 9
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEEEe--cCceEEEEECC--c--
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNYSF--SNTILAVKLNR--K-- 148 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~--~-- 148 (161)
++||++++......+.+|.. .+.+++|+| ++..+++++.|++|++||+.+++....+.. ...|..+.|+| +
T Consensus 122 ~vw~~~~~~~~~~~~~~~~~--~v~~~~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~ 199 (814)
T 3mkq_A 122 KLWNWENNWALEQTFEGHEH--FVMCVAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKP 199 (814)
T ss_dssp EEEEGGGTSEEEEEEECCSS--CEEEEEEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCC
T ss_pred EEEECCCCceEEEEEcCCCC--cEEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCC
Confidence 99999887555567777765 477889999 888888888899999999999888777753 38899999988 5
Q ss_pred EEEEEecc
Q psy505 149 KEEEEDEE 156 (161)
Q Consensus 149 ~~vv~~~~ 156 (161)
.+++...+
T Consensus 200 ~l~~~~~d 207 (814)
T 3mkq_A 200 YMITASDD 207 (814)
T ss_dssp EEEEECTT
T ss_pred EEEEEeCC
Confidence 45554443
|
| >3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.80 E-value=1.5e-18 Score=137.48 Aligned_cols=137 Identities=9% Similarity=0.034 Sum_probs=106.5
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcC---------CCCceeeee-ccCccceeee--------eEEEecCCc-eE
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDAD---------NLHAKTMIP-AHDSPLAALA--------SLSVGTKSG-YR 76 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~---------~~~~~~~l~-~H~~~V~~l~--------~lasgs~dg-ir 76 (161)
.+.++.++|+ +++++. ||+|++|+.. +++.+..+. +|.++|.+++ +|++|+.|| |+
T Consensus 78 ~v~~~~~~~~---~~s~s~--D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~dg~i~ 152 (343)
T 3lrv_A 78 NPRTGGEHPA---IISRGP--CNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVNTEYFIWADNRGTIG 152 (343)
T ss_dssp CCCTTCCCCS---EEEECS--TTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC---CCEEEEEETTCCEE
T ss_pred CceeeeeCCc---eEEecC--CCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCCCCEEEEEeCCCcEE
Confidence 4556677777 666555 9999999655 555555554 7878999987 799999999 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeE-EEEE--ecCceEEEEECCc--EEE
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEI-CNYS--FSNTILAVKLNRK--KEE 151 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i-~~l~--~~~~V~~v~~~~~--~~v 151 (161)
+||+++++.+ ..+..+. ...+.+++|+|++..+++|+.|++|+|||+++++++ ..+. |.++|.+++|+|+ .++
T Consensus 153 ~wd~~~~~~~-~~~~~~~-~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~l~fs~~g~~l~ 230 (343)
T 3lrv_A 153 FQSYEDDSQY-IVHSAKS-DVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFPVDEEAKIKEVKFADNGYWMV 230 (343)
T ss_dssp EEESSSSCEE-EEECCCS-SCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECCCCTTSCEEEEEECTTSSEEE
T ss_pred EEECCCCcEE-EEEecCC-CCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEeccCCCCEEEEEEeCCCCEEE
Confidence 9999998764 3443332 223778899999999999989999999999999987 6665 5789999999998 666
Q ss_pred EEecccee
Q psy505 152 EEDEEEEK 159 (161)
Q Consensus 152 v~~~~~~~ 159 (161)
...++.|+
T Consensus 231 s~~~~~v~ 238 (343)
T 3lrv_A 231 VECDQTVV 238 (343)
T ss_dssp EEESSBEE
T ss_pred EEeCCeEE
Confidence 66666553
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1e-18 Score=139.74 Aligned_cols=109 Identities=17% Similarity=0.298 Sum_probs=88.2
Q ss_pred CceeEEeecCCCceEEEEc-CCCCcceEEEEEcCCCC----------------ceeeeeccCccceeee------eEEEe
Q psy505 14 PNGICCLCVNSDNCYLAYP-GSNSIGEVQIFDADNLH----------------AKTMIPAHDSPLAALA------SLSVG 70 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~-g~~~dg~v~iWd~~~~~----------------~~~~l~~H~~~V~~l~------~lasg 70 (161)
+.+++++++ .++|++ |.. ||.|++||+.+++ ++..+.+|.++|++++ +||+|
T Consensus 139 ~~~~~~~s~----~~la~~sg~~-~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~g~~l~s~ 213 (355)
T 3vu4_A 139 FGGVCEFSN----GLLVYSNEFN-LGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRKSDMVATC 213 (355)
T ss_dssp EEEEEEEET----TEEEEEESSC-TTCEEEEECCC------------------CCEEECCCSSCEEEEEECTTSSEEEEE
T ss_pred CCceEEEEc----cEEEEeCCCc-CcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCCCCEEEEE
Confidence 456666655 466665 563 9999999999876 2788999999999999 89999
Q ss_pred cCCc--eEEEEeCCcCceeeEEee-cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC
Q psy505 71 TKSG--YRLFSLNSIDTLEQIYEN-SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 71 s~dg--iriwd~~~~~~~~~~~~~-~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~ 129 (161)
+.|| |||||+++++++..+..+ |.. .+.+++|+|++..+++++.|++|+|||++++.
T Consensus 214 s~d~~~v~iwd~~~~~~~~~~~~g~h~~--~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~ 273 (355)
T 3vu4_A 214 SQDGTIIRVFKTEDGVLVREFRRGLDRA--DVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQ 273 (355)
T ss_dssp ETTCSEEEEEETTTCCEEEEEECTTCCS--CEEEEEECTTSCEEEEEETTCEEEEEESSCCS
T ss_pred eCCCCEEEEEECCCCcEEEEEEcCCCCC--cEEEEEECCCCCEEEEEECCCEEEEEEccCCC
Confidence 9998 999999999877544335 654 47889999999999999999999999998753
|
| >4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-19 Score=147.46 Aligned_cols=120 Identities=11% Similarity=0.121 Sum_probs=99.7
Q ss_pred CCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCC
Q psy505 11 PPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 11 ~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~ 82 (161)
+.....+++++++|++.++++++. ||.|++||++ ++.+..+.+|.++|++++ +|++|+.|+ |+|||+++
T Consensus 206 ~~~~~~~~~~~~~~~~~~l~~g~~--dg~i~~wd~~-~~~~~~~~~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~ 282 (435)
T 4e54_B 206 DTINIWFCSLDVSASSRMVVTGDN--VGNVILLNMD-GKELWNLRMHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQ 282 (435)
T ss_dssp SSCSCCCCCEEEETTTTEEEEECS--SSBEEEEESS-SCBCCCSBCCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTT
T ss_pred CCCCccEEEEEECCCCCEEEEEeC--CCcEeeeccC-cceeEEEecccceEEeeeecCCCceEEEEecCcceeeEEeccc
Confidence 344556788999999999998776 9999999997 567789999999999998 789999999 99999988
Q ss_pred cCceeeEE--eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 83 IDTLEQIY--ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 83 ~~~~~~~~--~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
++....+. .+|.. .|.+++|+|++..+++++.|++|+|||++++++...+.
T Consensus 283 ~~~~~~~~~~~~h~~--~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~~~~~ 335 (435)
T 4e54_B 283 VRGKASFLYSLPHRH--PVNAACFSPDGARLLTTDQKSEIRVYSASQWDCPLGLI 335 (435)
T ss_dssp CCSSSCCSBCCBCSS--CEEECCBCTTSSEEEEEESSSCEEEEESSSSSSEEEEC
T ss_pred ccccceEEEeeeccc--cccceeECCCCCeeEEEcCCCEEEEEECCCCccceEEe
Confidence 65432222 35654 47789999999889999899999999999998877664
|
| >1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=6.9e-19 Score=140.18 Aligned_cols=140 Identities=13% Similarity=0.136 Sum_probs=106.5
Q ss_pred CCCCCCceeEEeecCCCce-EEEEcCCCCcceEEEEEc----CCCC------ceeeeec----------cCccceeee--
Q psy505 9 DTPPNPNGICCLCVNSDNC-YLAYPGSNSIGEVQIFDA----DNLH------AKTMIPA----------HDSPLAALA-- 65 (161)
Q Consensus 9 ~~~~~~~~v~~~~~~~d~~-~la~~g~~~dg~v~iWd~----~~~~------~~~~l~~----------H~~~V~~l~-- 65 (161)
..+.+...|.+++++|+|. ++|+++. ||.|++||+ .+++ ....+.. |.++|.+++
T Consensus 40 ~~~~~~~~v~~~~~s~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s 117 (425)
T 1r5m_A 40 KEIVKLDNIVSSTWNPLDESILAYGEK--NSVARLARIVETDQEGKKYWKLTIIAELRHPFALSASSGKTTNQVTCLAWS 117 (425)
T ss_dssp EEEEECSCCSEEEECSSCTTEEEEEET--BTEEEEEEEEEC------CEEEEEEEEEECCCCCC------CBCEEEEEEC
T ss_pred eeeeccCceEEEEECCCCCcEEEEecC--CceEEEEEEecccCCccccccccccccccccccccccccCCCCceEEEEEc
Confidence 3445556789999999999 9998776 999999999 8888 4555554 788999998
Q ss_pred ----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-cCc
Q psy505 66 ----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-SNT 139 (161)
Q Consensus 66 ----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~~ 139 (161)
+|++|+.|| |++|| .+++.+ ..+.+|.. .+.+++|+|++..+++++.|+.|++||+++++.+..+.. ...
T Consensus 118 ~~~~~l~~~~~dg~i~i~~-~~~~~~-~~~~~~~~--~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~ 193 (425)
T 1r5m_A 118 HDGNSIVTGVENGELRLWN-KTGALL-NVLNFHRA--PIVSVKWNKDGTHIISMDVENVTILWNVISGTVMQHFELKETG 193 (425)
T ss_dssp TTSSEEEEEETTSCEEEEE-TTSCEE-EEECCCCS--CEEEEEECTTSSEEEEEETTCCEEEEETTTTEEEEEECCC---
T ss_pred CCCCEEEEEeCCCeEEEEe-CCCCee-eeccCCCc--cEEEEEECCCCCEEEEEecCCeEEEEECCCCcEEEEeeccccC
Confidence 899999999 99999 555555 45566764 477889999888788877899999999999999888764 334
Q ss_pred ---------------eEEEEECCcEEEEEe
Q psy505 140 ---------------ILAVKLNRKKEEEED 154 (161)
Q Consensus 140 ---------------V~~v~~~~~~~vv~~ 154 (161)
|.++.|+|+..+++.
T Consensus 194 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 223 (425)
T 1r5m_A 194 GSSINAENHSGDGSLGVDVEWVDDDKFVIP 223 (425)
T ss_dssp ------------CCCBSCCEEEETTEEEEE
T ss_pred ccceeeccccCCcceeeEEEEcCCCEEEEE
Confidence 899999887544443
|
| >4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.3e-18 Score=140.86 Aligned_cols=106 Identities=8% Similarity=0.023 Sum_probs=83.1
Q ss_pred CCCceEEEEcCCCCcceEEEEEcCCCCce-----eeeeccCccceeee--------------eEEEecCCc-eEEEEeCC
Q psy505 23 NSDNCYLAYPGSNSIGEVQIFDADNLHAK-----TMIPAHDSPLAALA--------------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 23 ~~d~~~la~~g~~~dg~v~iWd~~~~~~~-----~~l~~H~~~V~~l~--------------~lasgs~dg-iriwd~~~ 82 (161)
.+++.++|+++. |++|||||++++++. ..+.||++.|++|+ +|||||+|+ |||||+++
T Consensus 98 ~~~~~~las~~~--d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d~~~las~s~D~tv~~Wd~~~ 175 (393)
T 4gq1_A 98 PVYSLFLACVCQ--DNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLAEQVIASVGDDCTLIIWRLTD 175 (393)
T ss_dssp CEEEEEEEEEET--TSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEEEEEEEEEETTSEEEEEEEET
T ss_pred CCCCCEEEEEeC--CCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCCCCEEEEEECCCeEEEEECCC
Confidence 446778888665 999999999988643 45789999999988 689999999 99999988
Q ss_pred cCceeeEEeecCcceEEEEEeecCCe-EEEEecCCCCeEEEEecCCCCeEEE
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSL-VAVVSLSSPRKLTVCHFKRGSEICN 133 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~-~~~~s~~~d~~i~iWD~~~~~~i~~ 133 (161)
+.++..++ +|... +.+++|+|++ ..+++++.|++|++||+++++...+
T Consensus 176 ~~~~~~~~-~~~~~--v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~ 224 (393)
T 4gq1_A 176 EGPILAGY-PLSSP--GISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEE 224 (393)
T ss_dssp TEEEEEEE-ECSSC--EEEEEEETTEEEEEEEEETTSEEEEEETTCCC----
T ss_pred Cceeeeec-CCCCC--cEEEEECCCCCceEEecCCCCEEEEEECCCCccccc
Confidence 76664444 44433 6789999987 4688888999999999999876543
|
| >2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B | Back alignment and structure |
|---|
Probab=99.79 E-value=4.7e-18 Score=138.82 Aligned_cols=141 Identities=14% Similarity=0.177 Sum_probs=110.1
Q ss_pred CCCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCC---CceeeeeccCccceeee-------eEEEecCCc-eEEEE
Q psy505 12 PNPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNL---HAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 12 ~~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~---~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd 79 (161)
.+...|.+++++| ++.++++++. ||.|++||++++ +++..+.+|..+|++++ +|++|+.|| |++||
T Consensus 229 ~h~~~v~~v~~~p~~~~~l~s~~~--dg~i~i~d~~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd 306 (430)
T 2xyi_A 229 GHTAVVEDVAWHLLHESLFGSVAD--DQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATGSADKTVALWD 306 (430)
T ss_dssp CCSSCEEEEEECSSCTTEEEEEET--TSEEEEEETTCSCSSSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSEEEEEE
T ss_pred CCCCCEeeeEEeCCCCCEEEEEeC--CCeEEEEECCCCCCCcceeEeecCCCCeEEEEeCCCCCCEEEEEeCCCeEEEEe
Confidence 3455689999999 6677777665 999999999987 57888999999999999 689999999 99999
Q ss_pred eCCcCceeeEEeecCcceEEEEEeecCCe-EEEEecCCCCeEEEEecCC--------------CCeEEEEE-ecCceEEE
Q psy505 80 LNSIDTLEQIYENSQEDVCIVERLFSSSL-VAVVSLSSPRKLTVCHFKR--------------GSEICNYS-FSNTILAV 143 (161)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~~fs~~~-~~~~s~~~d~~i~iWD~~~--------------~~~i~~l~-~~~~V~~v 143 (161)
+++.......+.+|.. .+.++.|+|++ ..+++++.|++|+|||+.+ .+.+..+. |.+.|.++
T Consensus 307 ~~~~~~~~~~~~~h~~--~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~ 384 (430)
T 2xyi_A 307 LRNLKLKLHSFESHKD--EIFQVQWSPHNETILASSGTDRRLHVWDLSKIGEEQSTEDAEDGPPELLFIHGGHTAKISDF 384 (430)
T ss_dssp TTCTTSCSEEEECCSS--CEEEEEECSSCTTEEEEEETTSCCEEEEGGGTTCCCCHHHHHHCCTTEEEECCCCSSCEEEE
T ss_pred CCCCCCCeEEeecCCC--CEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCccccCccccccCCcceEEEcCCCCCCceEE
Confidence 9884333356667765 47788999977 4566777889999999987 24555543 56789999
Q ss_pred EECCc---EEEEEecc
Q psy505 144 KLNRK---KEEEEDEE 156 (161)
Q Consensus 144 ~~~~~---~~vv~~~~ 156 (161)
+|+|+ .++.+..+
T Consensus 385 ~~~p~~~~~l~s~s~d 400 (430)
T 2xyi_A 385 SWNPNEPWIICSVSED 400 (430)
T ss_dssp EECSSSTTEEEEEETT
T ss_pred EECCCCCCEEEEEECC
Confidence 99998 34444444
|
| >4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A | Back alignment and structure |
|---|
Probab=99.79 E-value=1.8e-17 Score=134.62 Aligned_cols=139 Identities=15% Similarity=0.231 Sum_probs=110.6
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC----ceeeeeccCccceeee-------eEE--EecCCc-eEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH----AKTMIPAHDSPLAALA-------SLS--VGTKSG-YRLF 78 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~----~~~~l~~H~~~V~~l~-------~la--sgs~dg-iriw 78 (161)
+...++.+.++|+|.++++++. ||.|++||..+++ .+..+..|...|.+++ +++ +|+.|+ ||+|
T Consensus 229 h~~~~~~~~~~~~g~~l~s~~~--D~~v~i~~~~~~~~~~~~~~~~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iw 306 (420)
T 4gga_A 229 HSQEVCGLRWAPDGRHLASGGN--DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 306 (420)
T ss_dssp CSSCEEEEEECTTSSEEEEEET--TSCEEEEESSCCSSCSCCSEEECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEE
T ss_pred cccceeeeeecCCCCeeeeeec--cccceEEeeccccccceeeeeecccCCceeeeeeCCCcccEEEEEeecCCCEEEEE
Confidence 4456888899999999999776 9999999999875 3567789999999988 454 467899 9999
Q ss_pred EeCCcCceeeEEeecCcceEEEEEeecCCe--EEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEE
Q psy505 79 SLNSIDTLEQIYENSQEDVCIVERLFSSSL--VAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEE 153 (161)
Q Consensus 79 d~~~~~~~~~~~~~~~~~~~v~~~~fs~~~--~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~ 153 (161)
|++++++.. .+..|. .+.++.|+|++ +++++++.|++|+|||..+++++.++. |.+.|++++|+|+ .++.+
T Consensus 307 d~~t~~~~~-~~~~~~---~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~~~~v~~l~gH~~~V~~l~~spdg~~l~S~ 382 (420)
T 4gga_A 307 NVCSGACLS-AVDAHS---QVCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA 382 (420)
T ss_dssp ETTTTEEEE-EEECSS---CEEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred eCCccccce-eecccc---ceeeeeecCCCCeEEEEEecCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 999987653 444443 36677788754 455556789999999999999999997 7899999999997 56666
Q ss_pred eccc
Q psy505 154 DEEE 157 (161)
Q Consensus 154 ~~~~ 157 (161)
..|.
T Consensus 383 s~D~ 386 (420)
T 4gga_A 383 AADE 386 (420)
T ss_dssp ETTT
T ss_pred ecCC
Confidence 6653
|
| >2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=138.46 Aligned_cols=140 Identities=13% Similarity=0.134 Sum_probs=114.7
Q ss_pred CCceeEEeecCCC-ceEEEEcCCCCcceEEEEEcCCCCceeeeecc------Cccceeee-------eEEEecCC----c
Q psy505 13 NPNGICCLCVNSD-NCYLAYPGSNSIGEVQIFDADNLHAKTMIPAH------DSPLAALA-------SLSVGTKS----G 74 (161)
Q Consensus 13 ~~~~v~~~~~~~d-~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H------~~~V~~l~-------~lasgs~d----g 74 (161)
+...+.+++++|+ +.++++++. ||.|++||+++++++..+..| ..+|.+++ +|++++.| .
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~--dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~ 241 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGS--SNFASIWDLKAKKEVIHLSYTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPS 241 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESS--SSCEEEEETTTTEEEEEECCCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCC
T ss_pred CCCCeeEEEeCCCCCcEEEEEcC--CCCEEEEECCCCCcceEEeccccccccCCceEEEEECCCCCCEEEEEECCCCCce
Confidence 4556889999998 678888665 999999999999999999877 78999998 78889888 4
Q ss_pred eEEEEeCCcCceeeEEe-ecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE--
Q psy505 75 YRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK-- 149 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~-~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~-- 149 (161)
|++||++++......+. +|.. .+.+++|+| ++..+++++.|++|++||+++++++..+. +...|.+++|+|+.
T Consensus 242 i~~~d~~~~~~~~~~~~~~~~~--~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~~~~~v~~~~~s~~~~~ 319 (416)
T 2pm9_A 242 ILIWDLRNANTPLQTLNQGHQK--GILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPARGNWCFKTKFAPEAPD 319 (416)
T ss_dssp CCEEETTSTTSCSBCCCSCCSS--CEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEECSSSCCCCEEECTTCTT
T ss_pred EEEEeCCCCCCCcEEeecCccC--ceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecCCCCceEEEEECCCCCC
Confidence 99999998743334555 6764 477889998 78778888889999999999999999887 57899999999964
Q ss_pred -EEEEecc
Q psy505 150 -EEEEDEE 156 (161)
Q Consensus 150 -~vv~~~~ 156 (161)
++.+..+
T Consensus 320 ~l~s~~~d 327 (416)
T 2pm9_A 320 LFACASFD 327 (416)
T ss_dssp EEEECCSS
T ss_pred EEEEEecC
Confidence 4444433
|
| >1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X | Back alignment and structure |
|---|
Probab=99.78 E-value=5.9e-18 Score=134.76 Aligned_cols=148 Identities=12% Similarity=0.094 Sum_probs=118.0
Q ss_pred ceEEecCCCCCCceeEEeecCCC----c---eEEEEcCCCCcceEEEEEcCCCCc-----eeeeecc-----Cccceeee
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSD----N---CYLAYPGSNSIGEVQIFDADNLHA-----KTMIPAH-----DSPLAALA 65 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d----~---~~la~~g~~~dg~v~iWd~~~~~~-----~~~l~~H-----~~~V~~l~ 65 (161)
++.++ .. +...|.+++++|+ | .++++++. ||.|++||+.+++. +..+.+| ..+|.+++
T Consensus 54 ~~~~~-~~--h~~~v~~~~~~~~~~~~g~~~~~l~s~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 128 (397)
T 1sq9_A 54 KSYSH-FV--HKSGLHHVDVLQAIERDAFELCLVATTSF--SGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALK 128 (397)
T ss_dssp GEEEE-EC--CTTCEEEEEEEEEEETTTEEEEEEEEEET--TSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEE
T ss_pred cceEE-ec--CCCcEEEEEEecccccCCccccEEEEEcC--CCCEEEEEccCCcccccccceeecccccccCCCcEEEEE
Confidence 45566 33 4456889999998 8 89998776 99999999999988 8999999 58898887
Q ss_pred ----------e-EEEecCCc-eEEEEeCC------cCcee----eEEee-----cCcceEEEEEeecCCeEEEEecCCCC
Q psy505 66 ----------S-LSVGTKSG-YRLFSLNS------IDTLE----QIYEN-----SQEDVCIVERLFSSSLVAVVSLSSPR 118 (161)
Q Consensus 66 ----------~-lasgs~dg-iriwd~~~------~~~~~----~~~~~-----~~~~~~v~~~~fs~~~~~~~s~~~d~ 118 (161)
+ |++|+.|| |++||+++ ++.+. ..+.+ +.+...+.+++|+|++ .+++++.|+
T Consensus 129 ~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg 207 (397)
T 1sq9_A 129 WGASNDRLLSHRLVATDVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNG 207 (397)
T ss_dssp EECCC----CEEEEEEETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTS
T ss_pred EeeccCCCCceEEEEEeCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCC
Confidence 3 99999999 99999988 66553 03333 1222347788999999 888888999
Q ss_pred eEEEEecCCCCeEEEEEe-------cCceEEEEECCc--EEEEEecc
Q psy505 119 KLTVCHFKRGSEICNYSF-------SNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 119 ~i~iWD~~~~~~i~~l~~-------~~~V~~v~~~~~--~~vv~~~~ 156 (161)
.|++||+++++++..+.. ...|.+++|+|+ .+++...+
T Consensus 208 ~i~i~d~~~~~~~~~~~~~~~h~~~~~~i~~i~~~~~~~~l~~~~~d 254 (397)
T 1sq9_A 208 TVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDS 254 (397)
T ss_dssp EEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEE
T ss_pred cEEEEECCCCceeEEEeccccccccCCccceEEECCCCCEEEEEecC
Confidence 999999999999988874 789999999987 55555554
|
| >3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.1e-17 Score=133.81 Aligned_cols=134 Identities=12% Similarity=0.074 Sum_probs=102.1
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC-CceeeeeccCccceeee--eEEE--ecCCc-eEEEEeCCcC----
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL-HAKTMIPAHDSPLAALA--SLSV--GTKSG-YRLFSLNSID---- 84 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~-~~~~~l~~H~~~V~~l~--~las--gs~dg-iriwd~~~~~---- 84 (161)
..|.+++++|+...++. |+.|++||+.++ +.+..+.. ...+.+++ ++|. |+.|| |++||+++++
T Consensus 101 ~~v~~v~~~~~~~~~~~-----~~~i~i~d~~~~~~~~~~~~~-~~~~~~~s~~~la~~sg~~~g~v~iwd~~~~~~~~~ 174 (355)
T 3vu4_A 101 APVKDLFLSREFIVVSY-----GDVISVFKFGNPWKRITDDIR-FGGVCEFSNGLLVYSNEFNLGQIHITKLQSSGSATT 174 (355)
T ss_dssp SCEEEEEECSSEEEEEE-----TTEEEEEESSTTCCBSSCCEE-EEEEEEEETTEEEEEESSCTTCEEEEECCC------
T ss_pred CceEEEEEcCCEEEEEE-----cCEEEEEECCCCceeeEEecc-CCceEEEEccEEEEeCCCcCcEEEEEECCCCCcccc
Confidence 35788888877644332 688999999888 77777766 33344444 5554 68899 9999998764
Q ss_pred -----------ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCe-EEEEecCCCCeEEEEE---ecCceEEEEECCc-
Q psy505 85 -----------TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRK-LTVCHFKRGSEICNYS---FSNTILAVKLNRK- 148 (161)
Q Consensus 85 -----------~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~-i~iWD~~~~~~i~~l~---~~~~V~~v~~~~~- 148 (161)
+....+.+|... |.+++|+|++..+++++.|++ |+|||+++++++..+. |...|.+++|+|+
T Consensus 175 ~~~~~~~~~~~p~~~~~~~h~~~--v~~~~~s~~g~~l~s~s~d~~~v~iwd~~~~~~~~~~~~g~h~~~v~~~~~s~~~ 252 (355)
T 3vu4_A 175 QDQGVQQKAILGKGVLIKAHTNP--IKMVRLNRKSDMVATCSQDGTIIRVFKTEDGVLVREFRRGLDRADVVDMKWSTDG 252 (355)
T ss_dssp ------------CCEEECCCSSC--EEEEEECTTSSEEEEEETTCSEEEEEETTTCCEEEEEECTTCCSCEEEEEECTTS
T ss_pred ccccccccccCcccEEEEccCCc--eEEEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCCCCcEEEEEECCCC
Confidence 112466788754 778899999999999999998 9999999999999997 7889999999997
Q ss_pred -EEEEEecc
Q psy505 149 -KEEEEDEE 156 (161)
Q Consensus 149 -~~vv~~~~ 156 (161)
.++.+..+
T Consensus 253 ~~l~s~s~d 261 (355)
T 3vu4_A 253 SKLAVVSDK 261 (355)
T ss_dssp CEEEEEETT
T ss_pred CEEEEEECC
Confidence 56666555
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.8e-18 Score=134.84 Aligned_cols=138 Identities=17% Similarity=0.300 Sum_probs=110.9
Q ss_pred CCceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeee-------------ccCccceeee-------eEEEec
Q psy505 13 NPNGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-------------AHDSPLAALA-------SLSVGT 71 (161)
Q Consensus 13 ~~~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-------------~H~~~V~~l~-------~lasgs 71 (161)
+...|.+++++| ++.++|+++. ||.|++||+.+++....+. +|..+|.+++ +|++|+
T Consensus 42 h~~~v~~~~~s~~~~~~l~~~~~--dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~s~~ 119 (408)
T 4a11_B 42 HGGGINTLDIEPVEGRYMLSGGS--DGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHDTGMFTSSS 119 (408)
T ss_dssp CSSCEEEEEECTTTCCEEEEEET--TSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTCTTCEEEEE
T ss_pred cCCcEEEEEEecCCCCEEEEEcC--CCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCCCcEEEEEe
Confidence 556799999999 9999999776 9999999999988776664 6999999998 799999
Q ss_pred CCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecC---CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEEC
Q psy505 72 KSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSS---SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLN 146 (161)
Q Consensus 72 ~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~---~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~ 146 (161)
.|| |++||+++++.. ..+. +... +.++.|+| ++..+++++.|+.|++||+++++++..+. +...|.+++|+
T Consensus 120 ~d~~i~iwd~~~~~~~-~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~ 195 (408)
T 4a11_B 120 FDKTLKVWDTNTLQTA-DVFN-FEET--VYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQGHRQEILAVSWS 195 (408)
T ss_dssp TTSEEEEEETTTTEEE-EEEE-CSSC--EEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEECCCCSCEEEEEEC
T ss_pred CCCeEEEeeCCCCccc-eecc-CCCc--eeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeecCCCCcEEEEEEC
Confidence 999 999999987655 3333 3323 55666765 44466666788999999999999988887 67899999999
Q ss_pred CcE---EEEEecc
Q psy505 147 RKK---EEEEDEE 156 (161)
Q Consensus 147 ~~~---~vv~~~~ 156 (161)
|+. +++...+
T Consensus 196 ~~~~~ll~~~~~d 208 (408)
T 4a11_B 196 PRYDYILATASAD 208 (408)
T ss_dssp SSCTTEEEEEETT
T ss_pred CCCCcEEEEEcCC
Confidence 984 5555544
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.78 E-value=1.9e-18 Score=142.66 Aligned_cols=134 Identities=10% Similarity=0.019 Sum_probs=105.0
Q ss_pred CceeEEeecCCCceEEEE---cCCCCcceEEEEEcCCC--------Cc---eeeeeccCccceeee-------eEEEecC
Q psy505 14 PNGICCLCVNSDNCYLAY---PGSNSIGEVQIFDADNL--------HA---KTMIPAHDSPLAALA-------SLSVGTK 72 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~---~g~~~dg~v~iWd~~~~--------~~---~~~l~~H~~~V~~l~-------~lasgs~ 72 (161)
+..+.+++++|||.+||. +++. ||+|+|||+.++ ++ ...+.+|.++|++++ +||+|+.
T Consensus 92 ~~~v~~l~~spdg~~lav~~~sgs~-d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~~~~las~s~ 170 (434)
T 2oit_A 92 KFPIHHLALSCDNLTLSACMMSSEY-GSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTVPSMVAVCLA 170 (434)
T ss_dssp SSCEEEEEECTTSCEEEEEEEETTT-EEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSCTTEEEEEET
T ss_pred CCcccEEEEcCCCCEEEEEEeccCC-CceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCCCCEEEEEEC
Confidence 345899999999999994 3553 999999998765 22 456778999999998 7999999
Q ss_pred Cc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-c-------CceEEE
Q psy505 73 SG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-S-------NTILAV 143 (161)
Q Consensus 73 dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~-------~~V~~v 143 (161)
|| |++||++++... ....+|.. .+.+++|+|++..+++++.|++|++||.+ ++....+.. . ..|.++
T Consensus 171 Dg~v~iwD~~~~~~~-~~~~~~~~--~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~~~~~~~~~~~~~~~~~~~v~~v 246 (434)
T 2oit_A 171 DGSIAVLQVTETVKV-CATLPSTV--AVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQEKKVIPCPPFYESDHPVRVLDV 246 (434)
T ss_dssp TSCEEEEEESSSEEE-EEEECGGG--CEEEEEECTTSSCEEEEETTSCEEEECTT-CCEEEEECCCTTCCTTSCEEEEEE
T ss_pred CCeEEEEEcCCCcce-eeccCCCC--ceeEEEEcCCCCEEEEEcCCCcEEEEccC-CcccccccCCcccCCCCceeEEEE
Confidence 99 999999987533 23345543 47789999999888888899999999998 666666542 1 279999
Q ss_pred EECCcEEEE
Q psy505 144 KLNRKKEEE 152 (161)
Q Consensus 144 ~~~~~~~vv 152 (161)
.|+++...+
T Consensus 247 ~w~~~~~~l 255 (434)
T 2oit_A 247 LWIGTYVFA 255 (434)
T ss_dssp EEEETTEEE
T ss_pred EEecCceEE
Confidence 999885444
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.78 E-value=3e-18 Score=149.68 Aligned_cols=131 Identities=12% Similarity=0.086 Sum_probs=107.0
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcC--CCCceeeeeccCccceeee--------eEEEecCCc-eEEEEeC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDAD--NLHAKTMIPAHDSPLAALA--------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~--~~~~~~~l~~H~~~V~~l~--------~lasgs~dg-iriwd~~ 81 (161)
|...|.+++++|+|.++++++. ||+|+|||+. +++++..+.+|.++|++++ +|++|+.|| |++||++
T Consensus 8 H~~~V~~l~~s~dg~~latg~~--dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~ 85 (753)
T 3jro_A 8 HNELIHDAVLDYYGKRLATCSS--DKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEE 85 (753)
T ss_dssp CCCCEEEECCCSSSCCEEEEET--TTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEE
T ss_pred CcceeEEEEECCCCCeEEEEEC--CCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECC
Confidence 4456999999999999999776 9999999998 5567889999999999998 799999999 9999998
Q ss_pred CcCc-eeeEEeecCcceEEEEEeecCC--eEEEEecCCCCeEEEEecCCCCeE--EEE-EecCceEEEEECC
Q psy505 82 SIDT-LEQIYENSQEDVCIVERLFSSS--LVAVVSLSSPRKLTVCHFKRGSEI--CNY-SFSNTILAVKLNR 147 (161)
Q Consensus 82 ~~~~-~~~~~~~~~~~~~v~~~~fs~~--~~~~~s~~~d~~i~iWD~~~~~~i--~~l-~~~~~V~~v~~~~ 147 (161)
+++. ....+.+|.. .+.+++|+|+ +..+++++.|++|++||++++... ..+ .+...|.++.|+|
T Consensus 86 ~~~~~~~~~~~~h~~--~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~~~~~~v~~l~~~p 155 (753)
T 3jro_A 86 NGRWSQIAVHAVHSA--SVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIIDAHAIGVNSASWAP 155 (753)
T ss_dssp TTEEEEEEEECCCSS--CEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEECCSSCEEEEEECC
T ss_pred CCcccccccccCCCC--CeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEeecCCCceEEEEecC
Confidence 8751 1234455654 4778889998 777788888999999999988433 233 3678999999998
|
| >4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.78 E-value=4.6e-17 Score=125.55 Aligned_cols=139 Identities=14% Similarity=0.230 Sum_probs=107.3
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc----eeeeeccCccceeee---------eEEEecCCc-eEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA----KTMIPAHDSPLAALA---------SLSVGTKSG-YRLF 78 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~----~~~l~~H~~~V~~l~---------~lasgs~dg-iriw 78 (161)
+...+..+++++++.++++++. ||+|++||+++++. ......|.++|.+++ .+++|+.++ |++|
T Consensus 149 ~~~~~~~~~~~~~~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~i~lw 226 (318)
T 4ggc_A 149 HSQEVCGLRWAPDGRHLASGGN--DNLVNVWPSAPGEGGWVPLQTFTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIW 226 (318)
T ss_dssp CSSCEEEEEECTTSSEEEEEET--TSCEEEEESSCBTTBSCCSEEECCCCSCEEEEEECTTSTTEEEEEECTTTCEEEEE
T ss_pred ccCceEEEEEcCCCCEEEEEec--CcceeEEECCCCcccccceeeecccCCceEEEEecCCCCcEEEEEecCCCCEEEEE
Confidence 3445778888899999998776 99999999998764 345667888888877 457888899 9999
Q ss_pred EeCCcCceeeEEeecCcceEEEEEeecC--CeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEE
Q psy505 79 SLNSIDTLEQIYENSQEDVCIVERLFSS--SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEE 153 (161)
Q Consensus 79 d~~~~~~~~~~~~~~~~~~~v~~~~fs~--~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~ 153 (161)
|.+++... ... .+... +..+.|+| +.+++++++.|++|+|||+++++++.++. |.+.|.+++|+|+ .|+.+
T Consensus 227 d~~~~~~~-~~~-~~~~~--v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~~~~~~~l~gH~~~V~~l~~spdg~~l~S~ 302 (318)
T 4ggc_A 227 NVCSGACL-SAV-DAHSQ--VCSILWSPHYKELISGHGFAQNQLVIWKYPTMAKVAELKGHTSRVLSLTMSPDGATVASA 302 (318)
T ss_dssp ETTTCCEE-EEE-ECSSC--EEEEEEETTTTEEEEEECTTTCCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEE
T ss_pred eccccccc-ccc-cceee--eeeeeecccccceEEEEEcCCCEEEEEECCCCcEEEEEcCCCCCEEEEEEcCCCCEEEEE
Confidence 99887644 222 33333 45556665 55666777789999999999999999997 7899999999998 56666
Q ss_pred eccc
Q psy505 154 DEEE 157 (161)
Q Consensus 154 ~~~~ 157 (161)
..|.
T Consensus 303 s~D~ 306 (318)
T 4ggc_A 303 AADE 306 (318)
T ss_dssp ETTT
T ss_pred ecCC
Confidence 6653
|
| >3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.1e-17 Score=130.83 Aligned_cols=144 Identities=11% Similarity=0.096 Sum_probs=106.7
Q ss_pred CCceeEEeecCCCceEEEEcCCC--CcceEEEEEcCCCCceeee-eccCccceeee---------eEEEecCCc-eEEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSN--SIGEVQIFDADNLHAKTMI-PAHDSPLAALA---------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~--~dg~v~iWd~~~~~~~~~l-~~H~~~V~~l~---------~lasgs~dg-iriwd 79 (161)
+...|.+++++|++..++++|+. .||.|+|||+.+++..... .+|.++|.+++ +|++|+.|| |++||
T Consensus 17 h~~~v~~~~~~p~~~~l~~~~s~~~~d~~v~iw~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~iwd 96 (357)
T 3i2n_A 17 FNYTVFDCKWVPCSAKFVTMGNFARGTGVIQLYEIQHGDLKLLREIEKAKPIKCGTFGATSLQQRYLATGDFGGNLHIWN 96 (357)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CCCEEEEEEEECSSSEEEEEEEEESSCEEEEECTTCCTTTCCEEEEETTSCEEEEC
T ss_pred CCCceEEEEEcCCCceEEEecCccCCCcEEEEEeCCCCcccceeeecccCcEEEEEEcCCCCCCceEEEecCCCeEEEEe
Confidence 56679999999999666555541 1899999999998876554 38999999997 599999999 99999
Q ss_pred eCCcCceeeEEeecCcceEEEEE----eecCCeEEEEecCCCCeEEEEecCCCC-eEEEEEe-c----CceEEEE----E
Q psy505 80 LNSIDTLEQIYENSQEDVCIVER----LFSSSLVAVVSLSSPRKLTVCHFKRGS-EICNYSF-S----NTILAVK----L 145 (161)
Q Consensus 80 ~~~~~~~~~~~~~~~~~~~v~~~----~fs~~~~~~~s~~~d~~i~iWD~~~~~-~i~~l~~-~----~~V~~v~----~ 145 (161)
+++++.....+.+|...+..+.. +|+|++..+++++.|++|++||+++++ .+..+.. . ..|.++. |
T Consensus 97 ~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~ 176 (357)
T 3i2n_A 97 LEAPEMPVYSVKGHKEIINAIDGIGGLGIGEGAPEIVTGSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAY 176 (357)
T ss_dssp TTSCSSCSEEECCCSSCEEEEEEESGGGCC-CCCEEEEEETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCC
T ss_pred CCCCCccEEEEEecccceEEEeeccccccCCCccEEEEEeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEecc
Confidence 99887233566778765433322 567888788888889999999999987 6666652 2 3899998 5
Q ss_pred CCc--EEEEEecc
Q psy505 146 NRK--KEEEEDEE 156 (161)
Q Consensus 146 ~~~--~~vv~~~~ 156 (161)
+|+ .+++...+
T Consensus 177 ~~~~~~l~~~~~d 189 (357)
T 3i2n_A 177 NQEERVVCAGYDN 189 (357)
T ss_dssp C-CCCEEEEEETT
T ss_pred CCCCCEEEEEccC
Confidence 665 45555443
|
| >2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.77 E-value=7e-18 Score=143.98 Aligned_cols=134 Identities=12% Similarity=0.090 Sum_probs=102.1
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc-------eeee----eccCccceeee----eEEEecCCc-eEE
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA-------KTMI----PAHDSPLAALA----SLSVGTKSG-YRL 77 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~-------~~~l----~~H~~~V~~l~----~lasgs~dg-iri 77 (161)
..++.+++|||||.+||+++. ||+|+|||+.+++. +.++ .+|.+.|.+++ -+++++.|+ +|+
T Consensus 129 ~~sv~svafSPDG~~LAsgs~--DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgLaass~D~tVrl 206 (588)
T 2j04_A 129 SRTYHCFEWNPIESSIVVGNE--DGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVLVAALSNNSVFS 206 (588)
T ss_dssp TTCEEEEEECSSSSCEEEEET--TSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEEEEEETTCCEEE
T ss_pred cccEEEEEEcCCCCEEEEEcC--CCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcEEEEeCCCeEEE
Confidence 347999999999999999886 99999999999863 5777 77889999998 566777788 999
Q ss_pred EEeCCcCce--eeEE-eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEE-EEEecCceEEEEE--CCcEEE
Q psy505 78 FSLNSIDTL--EQIY-ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEIC-NYSFSNTILAVKL--NRKKEE 151 (161)
Q Consensus 78 wd~~~~~~~--~~~~-~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~-~l~~~~~V~~v~~--~~~~~v 151 (161)
||+.++... ...+ .+|.. .|.+++|+. ..+++++ +++|++||...++... .+.|.+.|..++| +|++..
T Consensus 207 Wd~~~~~~~~~~~tL~~~h~~--~V~svaFsg--~~LASa~-~~tIkLWd~~~~~~~~~~~gh~~~V~~va~~~s~d~~~ 281 (588)
T 2j04_A 207 MTVSASSHQPVSRMIQNASRR--KITDLKIVD--YKVVLTC-PGYVHKIDLKNYSISSLKTGSLENFHIIPLNHEKESTI 281 (588)
T ss_dssp ECCCSSSSCCCEEEEECCCSS--CCCCEEEET--TEEEEEC-SSEEEEEETTTTEEEEEECSCCSCCCEEEETTCSSCEE
T ss_pred EECCCCccccceeeecccccC--cEEEEEEEC--CEEEEEe-CCeEEEEECCCCeEEEEEcCCCceEEEEEeeeCCCCCE
Confidence 999876632 1233 36653 467888883 3445554 5899999999887633 3357889999999 999644
Q ss_pred EEe
Q psy505 152 EED 154 (161)
Q Consensus 152 v~~ 154 (161)
++.
T Consensus 282 La~ 284 (588)
T 2j04_A 282 LLM 284 (588)
T ss_dssp EEE
T ss_pred EEE
Confidence 443
|
| >3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.76 E-value=5.7e-17 Score=124.52 Aligned_cols=144 Identities=15% Similarity=0.144 Sum_probs=112.1
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG 74 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg 74 (161)
+++++++ ..|. ..|.++++ |++.++++++. ||.|++||+.+++....+..|..+|.+++ +|++|+.||
T Consensus 8 ~~~~~~l-~~h~--~~v~~~~~-~~~~~l~s~~~--dg~v~vw~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg 81 (313)
T 3odt_A 8 YQLSATL-KGHD--QDVRDVVA-VDDSKVASVSR--DGTVRLWSKDDQWLGTVVYTGQGFLNSVCYDSEKELLLFGGKDT 81 (313)
T ss_dssp CEEEEEE-CCCS--SCEEEEEE-EETTEEEEEET--TSEEEEEEESSSEEEEEEEECSSCEEEEEEETTTTEEEEEETTS
T ss_pred HHHHHHh-hCCC--CCcEEEEe-cCCCEEEEEEc--CCcEEEEECCCCEEEEEeecCCccEEEEEECCCCCEEEEecCCC
Confidence 3577788 5554 45888888 88889998776 99999999999999999999999999999 899999999
Q ss_pred -eEEEEeCCcC--ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECC---
Q psy505 75 -YRLFSLNSID--TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNR--- 147 (161)
Q Consensus 75 -iriwd~~~~~--~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~--- 147 (161)
+++|++.... .....+.+|... +.++.|+++.++. ++.|+.|++|| .++.+..+. +...|.++.|+|
T Consensus 82 ~i~~~~~~~~~~~~~~~~~~~~~~~--i~~~~~~~~~l~~--~~~d~~i~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~ 155 (313)
T 3odt_A 82 MINGVPLFATSGEDPLYTLIGHQGN--VCSLSFQDGVVIS--GSWDKTAKVWK--EGSLVYNLQAHNASVWDAKVVSFSE 155 (313)
T ss_dssp CEEEEETTCCTTSCC-CEECCCSSC--EEEEEEETTEEEE--EETTSEEEEEE--TTEEEEEEECCSSCEEEEEEEETTT
T ss_pred eEEEEEeeecCCCCcccchhhcccC--EEEEEecCCEEEE--EeCCCCEEEEc--CCcEEEecccCCCceeEEEEccCCC
Confidence 9999987643 112345566644 6778887776544 44688999999 677777776 678999999955
Q ss_pred cEEEEEecc
Q psy505 148 KKEEEEDEE 156 (161)
Q Consensus 148 ~~~vv~~~~ 156 (161)
+.++++..+
T Consensus 156 ~~l~~~~~d 164 (313)
T 3odt_A 156 NKFLTASAD 164 (313)
T ss_dssp TEEEEEETT
T ss_pred CEEEEEECC
Confidence 467766655
|
| >4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.76 E-value=2.9e-17 Score=130.30 Aligned_cols=137 Identities=10% Similarity=0.174 Sum_probs=106.1
Q ss_pred eeEEeecCC---CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcC
Q psy505 16 GICCLCVNS---DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 16 ~v~~~~~~~---d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~ 84 (161)
.+.+++++| ++.++++++. ||.|++||+.+++++..+.+|.++|.+++ +|++|+.|| |++||++++.
T Consensus 143 ~~~~~~~~~~~~~~~~~~~~~~--~~~v~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 143 TVYSHHMSPVSTKHCLVAVGTR--GPKVQLCDLKSGSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp CEEEEEECSSCSSCCEEEEEES--SSSEEEEESSSSCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred ceeeeEeecCCCCCcEEEEEcC--CCeEEEEeCCCcceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 455566655 5558888765 99999999999999999999999999998 589999999 9999998765
Q ss_pred ceeeEE---------------eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC---------------------
Q psy505 85 TLEQIY---------------ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG--------------------- 128 (161)
Q Consensus 85 ~~~~~~---------------~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~--------------------- 128 (161)
.....+ .+|.. .+.+++|+|++..+++++.|+.|++||++++
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 298 (408)
T 4a11_B 221 GCLITLDQHNGKKSQAVESANTAHNG--KVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENTLVNYGKVCNNSKKGLKFT 298 (408)
T ss_dssp CCSEECCTTTTCSCCCTTTSSCSCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTTCCBCCCCCCCCCCCCSSCCCCE
T ss_pred cccccccccccccceeeccccccccC--ceeEEEEcCCCCEEEEecCCCeEEEEECCCCccceeccccccccccccceeE
Confidence 322232 23443 4778999999888888778888999988764
Q ss_pred --------------------------CeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 129 --------------------------SEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 129 --------------------------~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+++..+. |.+.|.+++|+|+ .++....+
T Consensus 299 ~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~d 355 (408)
T 4a11_B 299 VSCGCSSEFVFVPYGSTIAVYTVYSGEQITMLKGHYKTVDCCVFQSNFQELYSGSRD 355 (408)
T ss_dssp ECCSSSSCEEEEEETTEEEEEETTTCCEEEEECCCSSCEEEEEEETTTTEEEEEETT
T ss_pred EecCCCceEEEEecCCEEEEEECcCCcceeeeccCCCeEEEEEEcCCCCEEEEECCC
Confidence 4455555 5689999999997 36666554
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.75 E-value=3.2e-17 Score=136.92 Aligned_cols=139 Identities=14% Similarity=0.094 Sum_probs=115.3
Q ss_pred CCceeEEeecCCCceEEEEcCCCCc----ceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEe
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSI----GEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~d----g~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~ 80 (161)
+...+.+++++|++.++++++. | +.|++|| +++.+..+.+|...|++++ ++++|+.|| |++||+
T Consensus 115 ~~~~v~~~~~s~~~~~l~~~~~--~~~~~~~v~~~d--~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~ 190 (615)
T 1pgu_A 115 LAGPISDISWDFEGRRLCVVGE--GRDNFGVFISWD--SGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQG 190 (615)
T ss_dssp CSSCEEEEEECTTSSEEEEEEC--CSSCSEEEEETT--TCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEET
T ss_pred ccccEEEEEEeCCCCEEEEecc--CCCCccEEEEEE--CCCcceeeecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeC
Confidence 3456999999999999998775 5 7888888 6788999999999999999 699999999 999999
Q ss_pred CCcCceeeEEeecCc-ceEEEEEeecCC-eEEEEecCCCCeEEEEecCCCCeEEEE-----EecCceEEEEEC-CcEEEE
Q psy505 81 NSIDTLEQIYENSQE-DVCIVERLFSSS-LVAVVSLSSPRKLTVCHFKRGSEICNY-----SFSNTILAVKLN-RKKEEE 152 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~-~~~v~~~~fs~~-~~~~~s~~~d~~i~iWD~~~~~~i~~l-----~~~~~V~~v~~~-~~~~vv 152 (161)
++++.+ ..+.+|.. ...+.+++|+|+ +..+++++.|+.|++||+++++++..+ .+...|.++.|+ .+.+++
T Consensus 191 ~~~~~~-~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~~ 269 (615)
T 1pgu_A 191 PPFKFS-ASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFAT 269 (615)
T ss_dssp TTBEEE-EEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEE
T ss_pred CCccee-eeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEecccccccCCceEEEEEcCCCEEEE
Confidence 887755 45566654 114778899999 888888878999999999999999998 678899999996 336666
Q ss_pred Eecc
Q psy505 153 EDEE 156 (161)
Q Consensus 153 ~~~~ 156 (161)
+..+
T Consensus 270 ~~~d 273 (615)
T 1pgu_A 270 VGAD 273 (615)
T ss_dssp EETT
T ss_pred EcCC
Confidence 6655
|
| >3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.75 E-value=4e-17 Score=142.57 Aligned_cols=139 Identities=12% Similarity=0.126 Sum_probs=109.9
Q ss_pred ceEEecCCCCCCceeEEeecCCC--ceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee--------eEEEe
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSD--NCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA--------SLSVG 70 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d--~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~--------~lasg 70 (161)
++.++ .. +...|.+++++|+ +.++++++. ||+|++||+.+++ .+..+.+|..+|.+++ ++++|
T Consensus 45 ~~~~l-~~--h~~~V~~l~~s~~~~~~~l~s~s~--Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sg 119 (753)
T 3jro_A 45 LIDTL-TG--HEGPVWRVDWAHPKFGTILASCSY--DGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVA 119 (753)
T ss_dssp EEEEE-CC--CSSCEEEEEECCTTSCSEEEEEET--TSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEE
T ss_pred cceec-cC--CcCceEEEEecCCCCCCEEEEEeC--CCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEE
Confidence 34455 33 4456888988877 899998776 9999999999987 7788899999999998 79999
Q ss_pred cCCc-eEEEEeCCcCce-eeEEeecCcceEEEEEeecC-------------CeEEEEecCCCCeEEEEecCCCC----eE
Q psy505 71 TKSG-YRLFSLNSIDTL-EQIYENSQEDVCIVERLFSS-------------SLVAVVSLSSPRKLTVCHFKRGS----EI 131 (161)
Q Consensus 71 s~dg-iriwd~~~~~~~-~~~~~~~~~~~~v~~~~fs~-------------~~~~~~s~~~d~~i~iWD~~~~~----~i 131 (161)
+.|| |++||++++... ...+.+|.. .+.++.|+| ++..+++++.|++|++||++++. ++
T Consensus 120 s~dg~I~vwdl~~~~~~~~~~~~~~~~--~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~ 197 (753)
T 3jro_A 120 SSDGKVSVVEFKENGTTSPIIIDAHAI--GVNSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLE 197 (753)
T ss_dssp ETTSEEEEEECCSSSCCCCEEEECCSS--CEEEEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEE
T ss_pred eCCCcEEEEEeecCCCcceeEeecCCC--ceEEEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceee
Confidence 9999 999999887432 234456654 477888998 46677777789999999999874 44
Q ss_pred EEEE-ecCceEEEEECCc
Q psy505 132 CNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 132 ~~l~-~~~~V~~v~~~~~ 148 (161)
..+. |.+.|.+++|+|+
T Consensus 198 ~~~~~h~~~V~~l~~sp~ 215 (753)
T 3jro_A 198 STLEGHSDWVRDVAWSPT 215 (753)
T ss_dssp EEECCCSSCEEEEEECCC
T ss_pred eeecCCCCcEEEEEeccC
Confidence 4444 5789999999988
|
| >1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A | Back alignment and structure |
|---|
Probab=99.74 E-value=1.1e-16 Score=133.76 Aligned_cols=139 Identities=10% Similarity=0.060 Sum_probs=112.2
Q ss_pred CCceeEEeecCCCce-EEEEcCCCCcceEEEEEcCCCCceeeeeccCc---cceeee-------eEEEecCCc-eEEEEe
Q psy505 13 NPNGICCLCVNSDNC-YLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS---PLAALA-------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~-~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~---~V~~l~-------~lasgs~dg-iriwd~ 80 (161)
+...+.+++++|++. .+++++. ||.|++||+.+++++..+.+|.+ +|++++ +|++|+.|| |++||+
T Consensus 159 ~~~~v~~~~~~~~~~~~l~~~~~--d~~v~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~ 236 (615)
T 1pgu_A 159 HSQRINACHLKQSRPMRSMTVGD--DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDG 236 (615)
T ss_dssp CSSCEEEEEECSSSSCEEEEEET--TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEET
T ss_pred CCccEEEEEECCCCCcEEEEEeC--CCcEEEEeCCCcceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEEC
Confidence 445689999999997 6777655 99999999999999999999999 999988 799999999 999999
Q ss_pred CCcCceeeEEe---ecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec-----CceEEEEECC-cEEE
Q psy505 81 NSIDTLEQIYE---NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS-----NTILAVKLNR-KKEE 151 (161)
Q Consensus 81 ~~~~~~~~~~~---~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~-----~~V~~v~~~~-~~~v 151 (161)
++++.+..+.. +|... +.++.|+ ++..+++++.|+.|++||+++++++..+... ..+.++.|+. +.++
T Consensus 237 ~~~~~~~~~~~~~~~~~~~--v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 313 (615)
T 1pgu_A 237 KSGEFLKYIEDDQEPVQGG--IFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII 313 (615)
T ss_dssp TTCCEEEECCBTTBCCCSC--EEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEEEEEETTEEE
T ss_pred CCCCEeEEecccccccCCc--eEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEEcCCCCcccCceeEEEeCCCCeEE
Confidence 99886643324 66544 6778888 7777777778899999999999999888754 6788888843 3555
Q ss_pred EEecc
Q psy505 152 EEDEE 156 (161)
Q Consensus 152 v~~~~ 156 (161)
+...+
T Consensus 314 ~~~~~ 318 (615)
T 1pgu_A 314 SLSLD 318 (615)
T ss_dssp EEETT
T ss_pred EEECC
Confidence 54443
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.73 E-value=4.5e-16 Score=123.98 Aligned_cols=138 Identities=13% Similarity=0.114 Sum_probs=107.6
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG 74 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg 74 (161)
++++++ ..+ ..+.+++++|||.+++++++. |++|++||+.+++.+..+..|. .+.+++ ++++++.++
T Consensus 23 ~~~~~~-~~~---~~~~~~~~s~dg~~l~~~~~~-d~~i~v~d~~~~~~~~~~~~~~-~v~~~~~spdg~~l~~~~~~~~ 96 (391)
T 1l0q_A 23 KVTATI-PVG---SNPMGAVISPDGTKVYVANAH-SNDVSIIDTATNNVIATVPAGS-SPQGVAVSPDGKQVYVTNMASS 96 (391)
T ss_dssp EEEEEE-ECS---SSEEEEEECTTSSEEEEEEGG-GTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTT
T ss_pred eEEEEe-ecC---CCcceEEECCCCCEEEEECCC-CCeEEEEECCCCeEEEEEECCC-CccceEECCCCCEEEEEECCCC
Confidence 345555 333 347889999999887555543 9999999999999999998776 788887 446677778
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEE-EecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcE
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAV-VSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~-~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~ 149 (161)
|++||+++++.+ ..+..+. .+.+++|+|++..+ ++++.|+.|++||+++++++..+.....+.++.|+|+.
T Consensus 97 ~v~v~d~~~~~~~-~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~dg 169 (391)
T 1l0q_A 97 TLSVIDTTSNTVA-GTVKTGK---SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDG 169 (391)
T ss_dssp EEEEEETTTTEEE-EEEECSS---SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTS
T ss_pred EEEEEECCCCeEE-EEEeCCC---CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEecCCCcceEEECCCC
Confidence 999999988755 3444443 25788999987544 66778899999999999998888877888999999983
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.71 E-value=2.6e-16 Score=126.92 Aligned_cols=133 Identities=8% Similarity=-0.040 Sum_probs=105.6
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee-----eeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT-----MIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~-----~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
+.+++++|++.++++++. |+.|++||+.+++.+. .+.+|.+.|++++ ++++++.|+ |++||+++++
T Consensus 125 ~~~~~~s~~~~~~~~~~~--~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~~~ 202 (433)
T 3bws_A 125 PKSVRFIDNTRLAIPLLE--DEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKTLA 202 (433)
T ss_dssp BCCCEESSSSEEEEEBTT--SSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTTCC
T ss_pred ceEEEEeCCCeEEEEeCC--CCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCCce
Confidence 446778887777777554 8999999999998877 5668999999998 889999999 9999999887
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEE-EecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEe
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAV-VSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~-~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~ 154 (161)
.+ ..+..|.. .+.+++|+|++..+ ++++.|+.|++||+++++.+..+.....+.+++|+|+ .++++.
T Consensus 203 ~~-~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 272 (433)
T 3bws_A 203 YK-ATVDLTGK--WSKILLYDPIRDLVYCSNWISEDISVIDRKTKLEIRKTDKIGLPRGLLLSKDGKELYIAQ 272 (433)
T ss_dssp EE-EEEECSSS--SEEEEEEETTTTEEEEEETTTTEEEEEETTTTEEEEECCCCSEEEEEEECTTSSEEEEEE
T ss_pred EE-EEEcCCCC--CeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcEEEEecCCCCceEEEEcCCCCEEEEEE
Confidence 65 34455543 36788899876433 5666788999999999998888777778999999998 344444
|
| >1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3 | Back alignment and structure |
|---|
Probab=99.71 E-value=1.8e-15 Score=120.46 Aligned_cols=133 Identities=9% Similarity=0.017 Sum_probs=106.6
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCcee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
.+.+++++|||.++++++.. |+.|++||+.+++.+..+..|. .+.+++ ++++++.|+ |++||+++++..
T Consensus 75 ~v~~~~~spdg~~l~~~~~~-~~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~- 151 (391)
T 1l0q_A 75 SPQGVAVSPDGKQVYVTNMA-SSTLSVIDTTSNTVAGTVKTGK-SPLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVI- 151 (391)
T ss_dssp SEEEEEECTTSSEEEEEETT-TTEEEEEETTTTEEEEEEECSS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEE-
T ss_pred CccceEECCCCCEEEEEECC-CCEEEEEECCCCeEEEEEeCCC-CcceEEECCCCCEEEEEeCCCCEEEEEECCCCcEE-
Confidence 68899999999988776763 8999999999999988888765 467777 447888899 999999988755
Q ss_pred eEEeecCcceEEEEEeecCCeEEE-EecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEe
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAV-VSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~-~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~ 154 (161)
..+..+.. +..++|+|++..+ ++++.++.|++||+++++++..+.+...+.+++|+|+ .+++..
T Consensus 152 ~~~~~~~~---~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~ 218 (391)
T 1l0q_A 152 NTVSVGRS---PKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVIDTVKVEAAPSGIAVNPEGTKAYVTN 218 (391)
T ss_dssp EEEECCSS---EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECSSEEEEEEECTTSSEEEEEE
T ss_pred EEEecCCC---cceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEEEEecCCCccceEECCCCCEEEEEe
Confidence 44444442 4678899987544 6667789999999999999888888889999999997 455554
|
| >1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A | Back alignment and structure |
|---|
Probab=99.70 E-value=2.1e-16 Score=123.24 Aligned_cols=138 Identities=14% Similarity=0.133 Sum_probs=110.1
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCC---------CCceeeeeccCccceeee----eEEEecCCc-eEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN---------LHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLF 78 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~---------~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriw 78 (161)
+...|.+++++| +..+++++. ||.|++||+++ ++++..+. |...|.+++ .+++|+.|| |++|
T Consensus 100 ~~~~v~~l~~~~-~~~l~s~~~--d~~i~iwd~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~~~~~l~~~~~d~~i~i~ 175 (342)
T 1yfq_A 100 ANLGICRICKYG-DDKLIAASW--DGLIEVIDPRNYGDGVIAVKNLNSNNTK-VKNKIFTMDTNSSRLIVGMNNSQVQWF 175 (342)
T ss_dssp CCSCEEEEEEET-TTEEEEEET--TSEEEEECHHHHTTBCEEEEESCSSSSS-SCCCEEEEEECSSEEEEEESTTEEEEE
T ss_pred CCCceEEEEeCC-CCEEEEEcC--CCeEEEEcccccccccccccCCeeeEEe-eCCceEEEEecCCcEEEEeCCCeEEEE
Confidence 556789999999 888888776 99999999998 88888887 999999999 789999999 9999
Q ss_pred EeCC-cCce-eeEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCC------CeEEEEE-ecC---------c
Q psy505 79 SLNS-IDTL-EQIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRG------SEICNYS-FSN---------T 139 (161)
Q Consensus 79 d~~~-~~~~-~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~------~~i~~l~-~~~---------~ 139 (161)
|+++ +... ......|.. .+.+++|+| ++..+++++.|+.|+|||+..+ +.+..+. +.. .
T Consensus 176 d~~~~~~~~~~~~~~~~~~--~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 253 (342)
T 1yfq_A 176 RLPLCEDDNGTIEESGLKY--QIRDVALLPKEQEGYACSSIDGRVAVEFFDDQGDDYNSSKRFAFRCHRLNLKDTNLAYP 253 (342)
T ss_dssp ESSCCTTCCCEEEECSCSS--CEEEEEECSGGGCEEEEEETTSEEEEEECCTTCCSTTCTTCEEEECCCCCTTCCSSCCC
T ss_pred ECCccccccceeeecCCCC--ceeEEEECCCCCCEEEEEecCCcEEEEEEcCCCcccccccceeeeccccccccccccee
Confidence 9987 5432 122233433 477889999 8888888888999999999887 7777776 433 8
Q ss_pred eEEEEECCc--EEEEEecc
Q psy505 140 ILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 140 V~~v~~~~~--~~vv~~~~ 156 (161)
|.+++|+|+ .+++...+
T Consensus 254 i~~~~~s~~~~~l~~~~~d 272 (342)
T 1yfq_A 254 VNSIEFSPRHKFLYTAGSD 272 (342)
T ss_dssp EEEEEECTTTCCEEEEETT
T ss_pred EEEEEEcCCCCEEEEecCC
Confidence 999999996 45555544
|
| >3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-15 Score=121.19 Aligned_cols=134 Identities=9% Similarity=-0.024 Sum_probs=107.4
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCc
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~ 85 (161)
...+.+++++|++..+++++. ||.|++||+.+++.+..+..|...+.+++ ++++++.|+ |++||+++++.
T Consensus 169 ~~~v~~~~~~~~~~~~~s~~~--d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~~~~ 246 (433)
T 3bws_A 169 LGFVETISIPEHNELWVSQMQ--ANAVHVFDLKTLAYKATVDLTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKTKLE 246 (433)
T ss_dssp CCEEEEEEEGGGTEEEEEEGG--GTEEEEEETTTCCEEEEEECSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTTTEE
T ss_pred CCceeEEEEcCCCEEEEEECC--CCEEEEEECCCceEEEEEcCCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCCCcE
Confidence 346888899999998888765 99999999999999999999999999998 446777888 99999998765
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecC--------CCCeEEEEecCCCCeEEEEEecCceEEEEECCcE--EEEE
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLS--------SPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK--EEEE 153 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~--------~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~--~vv~ 153 (161)
. ..+..+. .+..++|+|++..++.++ .|+.|++||+++++.+..+.+...+.+++|+|++ +++.
T Consensus 247 ~-~~~~~~~---~~~~~~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~ 320 (433)
T 3bws_A 247 I-RKTDKIG---LPRGLLLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTIGPPGNKRHIVSGNTENKIYVS 320 (433)
T ss_dssp E-EECCCCS---EEEEEEECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEEEEEECEEEEEECSSTTEEEEE
T ss_pred E-EEecCCC---CceEEEEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeeccCCCCcceEEECCCCCEEEEE
Confidence 4 3333332 377889999874444432 4789999999999988888787899999999984 4444
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.49 E-value=9.7e-13 Score=107.43 Aligned_cols=132 Identities=12% Similarity=0.055 Sum_probs=97.3
Q ss_pred ceeEEeecCCCceEEEEcCCCCcc---eEEEEEcCCCCceeeeeccCccceeee------eEE-EecCCc---eEEEEeC
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIG---EVQIFDADNLHAKTMIPAHDSPLAALA------SLS-VGTKSG---YRLFSLN 81 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg---~v~iWd~~~~~~~~~l~~H~~~V~~l~------~la-sgs~dg---iriwd~~ 81 (161)
..+.+++++|||..||+++. |+ .|++||+.++++. .+..|...+.+++ .|+ +++.|+ |++||++
T Consensus 179 ~~v~~~~~Spdg~~la~~s~--~~~~~~i~~~d~~tg~~~-~l~~~~~~~~~~~~spdg~~la~~~~~~g~~~i~~~d~~ 255 (415)
T 2hqs_A 179 QPLMSPAWSPDGSKLAYVTF--ESGRSALVIQTLANGAVR-QVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLA 255 (415)
T ss_dssp SCEEEEEECTTSSEEEEEEC--TTSSCEEEEEETTTCCEE-EEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CcceeeEEcCCCCEEEEEEe--cCCCcEEEEEECCCCcEE-EeecCCCcccCEEEcCCCCEEEEEEecCCCceEEEEECC
Confidence 45788999999999999775 53 9999999998875 6778888898888 565 676655 8999998
Q ss_pred CcCceeeEEeecCcceEEEEEeecCCeEEEEecCC-CC--eEEEEecCCCCeEEEEE-ecCceEEEEECCcE--EEEEe
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSS-PR--KLTVCHFKRGSEICNYS-FSNTILAVKLNRKK--EEEED 154 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~-d~--~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~--~vv~~ 154 (161)
+++. ..+.+|.. .+.+++|+|++..++.++. ++ .|.+||+.+++.. .+. +...+.+++|+|++ +++..
T Consensus 256 ~~~~--~~l~~~~~--~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~spdG~~l~~~~ 329 (415)
T 2hqs_A 256 SGQI--RQVTDGRS--NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQ-RITWEGSQNQDADVSSDGKFMVMVS 329 (415)
T ss_dssp TCCE--EECCCCSS--CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCE-ECCCSSSEEEEEEECTTSSEEEEEE
T ss_pred CCCE--EeCcCCCC--cccceEECCCCCEEEEEECCCCCcEEEEEECCCCCEE-EEecCCCcccCeEECCCCCEEEEEE
Confidence 8764 23344543 3678899998865554433 33 6888899988753 443 45789999999983 55544
|
| >2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A | Back alignment and structure |
|---|
Probab=99.47 E-value=5.9e-13 Score=109.75 Aligned_cols=112 Identities=9% Similarity=0.143 Sum_probs=86.9
Q ss_pred CCceeEEeecCCC-ceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSD-NCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d-~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
|...|.+++++|+ +.++|+++. ||+|++||++++..+....+|...|++++ +|++|+.|| |++||++ ++
T Consensus 148 h~~~V~~v~~~p~~~~~las~s~--Dg~v~iwD~~~~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~iwd~~-~~ 224 (434)
T 2oit_A 148 AGGMVIDMKWNPTVPSMVAVCLA--DGSIAVLQVTETVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVVQYLPT-LQ 224 (434)
T ss_dssp GGGSEEEEEECSSCTTEEEEEET--TSCEEEEEESSSEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEEEECTT-CC
T ss_pred CCCceEEEEECCCCCCEEEEEEC--CCeEEEEEcCCCcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEEEEccC-Cc
Confidence 4556999999997 788888765 99999999999987777888999999998 899999999 9999997 44
Q ss_pred ceeeEEeecC-----cceEEEEEeecCCeEEEEec-CCC------CeEEEEecCCC
Q psy505 85 TLEQIYENSQ-----EDVCIVERLFSSSLVAVVSL-SSP------RKLTVCHFKRG 128 (161)
Q Consensus 85 ~~~~~~~~~~-----~~~~v~~~~fs~~~~~~~s~-~~d------~~i~iWD~~~~ 128 (161)
.. ..+..|. +...+.++.|+++...+++. ..| ..+++||+.+.
T Consensus 225 ~~-~~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 225 EK-KVIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EE-EEECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cc-ccccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 33 2333321 23578899999988777432 122 24999999875
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=6.5e-12 Score=106.42 Aligned_cols=121 Identities=11% Similarity=0.026 Sum_probs=93.3
Q ss_pred ecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEe--CCcCceeeEEe
Q psy505 21 CVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSL--NSIDTLEQIYE 91 (161)
Q Consensus 21 ~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~--~~~~~~~~~~~ 91 (161)
+++|++..+++.+. |++|++||..+++++.++..+.. +.+++ +|++++.|+ |++||+ .+++.+..+ .
T Consensus 144 ~~~p~~~~~vs~~~--d~~V~v~D~~t~~~~~~i~~g~~-~~~v~~spdg~~l~v~~~d~~V~v~D~~~~t~~~~~~i-~ 219 (543)
T 1nir_A 144 DLDLPNLFSVTLRD--AGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEI-K 219 (543)
T ss_dssp CCCGGGEEEEEEGG--GTEEEEEETTTCCEEEEEECSTT-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEE-E
T ss_pred ccCCCCEEEEEEcC--CCeEEEEECCCceEEEEEecCcc-cceEEECCCCCEEEEECCCCeEEEEECcCCCCcEEEEE-e
Confidence 46888888877554 99999999999999999984433 77775 888888889 999999 787655433 3
Q ss_pred ecCcceEEEEEeecC----CeEEEEec-CCCCeEEEEecCCCCeEEEEEe-----------c-CceEEEEECCc
Q psy505 92 NSQEDVCIVERLFSS----SLVAVVSL-SSPRKLTVCHFKRGSEICNYSF-----------S-NTILAVKLNRK 148 (161)
Q Consensus 92 ~~~~~~~v~~~~fs~----~~~~~~s~-~~d~~i~iWD~~~~~~i~~l~~-----------~-~~V~~v~~~~~ 148 (161)
.+. ....++|+| ++..++++ ..+++|.|||..+++++..+.. + ..|.++.++|+
T Consensus 220 ~g~---~p~~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~s~~ 290 (543)
T 1nir_A 220 IGI---EARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIASHE 290 (543)
T ss_dssp CCS---EEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEECSS
T ss_pred cCC---CcceEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeecccCcccCccccccCCceEEEEECCC
Confidence 222 357889999 77555443 4578999999999999988753 2 27899999985
|
| >2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A | Back alignment and structure |
|---|
Probab=99.40 E-value=9.2e-12 Score=101.63 Aligned_cols=135 Identities=14% Similarity=0.038 Sum_probs=96.3
Q ss_pred CceeEEeecCCCceEEEEcCCCCcce--EEEEEcCCCCceeeeeccCccceeee------eEEEecC-Cc---eEEEEeC
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGE--VQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTK-SG---YRLFSLN 81 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~--v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~-dg---iriwd~~ 81 (161)
+..+.+++++|||..|+++++. ||. |++||+.+++. ..+..|...+.+++ +|++++. ++ |.+||+.
T Consensus 222 ~~~~~~~~~spdg~~la~~~~~-~g~~~i~~~d~~~~~~-~~l~~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~ 299 (415)
T 2hqs_A 222 PRHNGAPAFSPDGSKLAFALSK-TGSLNLYVMDLASGQI-RQVTDGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNIN 299 (415)
T ss_dssp SSCEEEEEECTTSSEEEEEECT-TSSCEEEEEETTTCCE-EECCCCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT
T ss_pred CCcccCEEEcCCCCEEEEEEec-CCCceEEEEECCCCCE-EeCcCCCCcccceEECCCCCEEEEEECCCCCcEEEEEECC
Confidence 3457899999999988855542 554 99999998776 67888998898888 6776665 44 6666888
Q ss_pred CcCceeeEEeecCcceEEEEEeecCCeEEEEecCC---CCeEEEEecCCCCeEEEEEecCceEEEEECCcE--EEEEec
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSS---PRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK--EEEEDE 155 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~---d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~--~vv~~~ 155 (161)
+++.. .+..+.. .+..++|+|++..++.++. +..|.+||+.++++. .+.....+.++.|+|++ ++....
T Consensus 300 ~~~~~--~l~~~~~--~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~~-~l~~~~~~~~~~~spdg~~l~~~s~ 373 (415)
T 2hqs_A 300 GGAPQ--RITWEGS--QNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGVQ-VLSSTFLDETPSLAPNGTMVIYSSS 373 (415)
T ss_dssp SSCCE--ECCCSSS--EEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCEE-ECCCSSSCEEEEECTTSSEEEEEEE
T ss_pred CCCEE--EEecCCC--cccCeEECCCCCEEEEEECcCCceEEEEEECCCCCEE-EecCCCCcCCeEEcCCCCEEEEEEc
Confidence 77532 2333432 4678899998866665433 358999999998863 44433489999999983 444443
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.40 E-value=1.7e-11 Score=95.59 Aligned_cols=133 Identities=12% Similarity=0.113 Sum_probs=97.8
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeec----cCccceeee-------eEEEecCCc-eEEEEeCCcC
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA----HDSPLAALA-------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~----H~~~V~~l~-------~lasgs~dg-iriwd~~~~~ 84 (161)
+..++++|||..++++.. ++.|.+||+.+++.+..+.. +...+.+++ ++++...++ |.+||.++++
T Consensus 187 ~~~~~~s~dg~~l~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~ 264 (353)
T 3vgz_A 187 STGLALDSEGKRLYTTNA--DGELITIDTADNKILSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGN 264 (353)
T ss_dssp CCCCEEETTTTEEEEECT--TSEEEEEETTTTEEEEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCC
T ss_pred cceEEECCCCCEEEEEcC--CCeEEEEECCCCeEEEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCc
Confidence 445677889998888765 89999999999998887764 455565565 444444556 9999999987
Q ss_pred ceeeEEeecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcE--EEEEecc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK--EEEEDEE 156 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~--~vv~~~~ 156 (161)
.+..+ .... + ..++|+|++. .+++...+++|.+||..+++.+..+.....+.+++|+|++ +.+...+
T Consensus 265 ~~~~~-~~~~-~---~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~ 334 (353)
T 3vgz_A 265 ILAKV-AAPE-S---LAVLFNPARNEAYVTHRQAGKVSVIDAKSYKVVKTFDTPTHPNSLALSADGKTLYVSVKQ 334 (353)
T ss_dssp EEEEE-ECSS-C---CCEEEETTTTEEEEEETTTTEEEEEETTTTEEEEEEECCSEEEEEEECTTSCEEEEEEEC
T ss_pred EEEEE-EcCC-C---ceEEECCCCCEEEEEECCCCeEEEEECCCCeEEEEEecCCCCCeEEEcCCCCEEEEEEcc
Confidence 65433 3222 1 3577898764 4556667789999999999998888877889999999983 5554443
|
| >1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=2e-11 Score=103.41 Aligned_cols=127 Identities=14% Similarity=0.116 Sum_probs=93.4
Q ss_pred cceEEecCCCCCCceeEEeecCC----CceEEEEcCCCCcceEEEEEcCCCCceeeeecc----------Cc-cceeee-
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNS----DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAH----------DS-PLAALA- 65 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~----d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H----------~~-~V~~l~- 65 (161)
+++.++ .. ..+...++++| ||.++++++.. +++|+|||..++++++++..+ .+ .+.++.
T Consensus 213 ~~~~~i-~~---g~~p~~va~sp~~~~dg~~l~v~~~~-~~~v~v~D~~t~~~~~~i~~~g~~~~~~~~~~~~~v~~i~~ 287 (543)
T 1nir_A 213 TKVAEI-KI---GIEARSVESSKFKGYEDRYTIAGAYW-PPQFAIMDGETLEPKQIVSTRGMTVDTQTYHPEPRVAAIIA 287 (543)
T ss_dssp EEEEEE-EC---CSEEEEEEECCSTTCTTTEEEEEEEE-SSEEEEEETTTCCEEEEEECCEECSSSCCEESCCCEEEEEE
T ss_pred cEEEEE-ec---CCCcceEEeCCCcCCCCCEEEEEEcc-CCeEEEEeccccccceeecccCcccCccccccCCceEEEEE
Confidence 455666 33 23568889999 99999887753 899999999999999988763 22 466665
Q ss_pred ------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEE-EEecCCCCeEEEEecCCCCeEEEEE
Q psy505 66 ------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVA-VVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 66 ------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~-~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
++++...++ |.+||..+++.+....-.+.. ....++|+|++.. ++++..+++|.+||.++++++..+.
T Consensus 288 s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i~~~~--~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i~ 363 (543)
T 1nir_A 288 SHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGAAP--FLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALVD 363 (543)
T ss_dssp CSSSSEEEEEETTTTEEEEEECTTSSSCEEEEEECCS--SCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred CCCCCEEEEEECCCCeEEEEEecCCCcceeEEeccCc--CccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEeec
Confidence 777888888 999999887654311112221 2456789998864 4555567899999999999988876
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.35 E-value=9.8e-12 Score=106.95 Aligned_cols=136 Identities=10% Similarity=0.048 Sum_probs=98.6
Q ss_pred CceeEEeecCCCceEEEEcCCCCcc-----eEEEEEcCCCCceeeeeccCcc------------------------ceee
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIG-----EVQIFDADNLHAKTMIPAHDSP------------------------LAAL 64 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg-----~v~iWd~~~~~~~~~l~~H~~~------------------------V~~l 64 (161)
...+..++++|||.+|++++.. || +|++||+.+++....+..|... |.++
T Consensus 36 ~~~~~~~~~SpdG~~la~~~~~-d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~ 114 (741)
T 2ecf_A 36 GPTLMKPKVAPDGSRVTFLRGK-DSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVDY 114 (741)
T ss_dssp CCCCEEEEECTTSSEEEEEECC-SSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCCC
T ss_pred CCCCCCceEecCCCEEEEEecc-CCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCccee
Confidence 4458899999999999997763 77 8999999999887777665433 6777
Q ss_pred e------eEEEecCCceEEEEeCCcC--ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe
Q psy505 65 A------SLSVGTKSGYRLFSLNSID--TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 65 ~------~lasgs~dgiriwd~~~~~--~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~ 136 (161)
+ +|++++...|++||+.++. .... +..+.. .+..++||||+..++..+ ++.|.+||+.+++.......
T Consensus 115 ~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~-l~~~~~--~~~~~~~SPDG~~la~~~-~~~i~~~d~~~g~~~~~~~~ 190 (741)
T 2ecf_A 115 QWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQ-LTHGEG--FATDAKLSPKGGFVSFIR-GRNLWVIDLASGRQMQLTAD 190 (741)
T ss_dssp EECTTSSEEEEEETTEEEEEESSSCSTTSCCB-CCCSSS--CEEEEEECTTSSEEEEEE-TTEEEEEETTTTEEEECCCC
T ss_pred EECCCCCEEEEEeCCcEEEEECCCCCcceEEE-cccCCc--ccccccCCCCCCEEEEEe-CCcEEEEecCCCCEEEeccC
Confidence 6 7888877339999998872 2323 334433 367889999997777664 46899999998876543332
Q ss_pred c-Cc----------------eEEEEECCc--EEEEEe
Q psy505 137 S-NT----------------ILAVKLNRK--KEEEED 154 (161)
Q Consensus 137 ~-~~----------------V~~v~~~~~--~~vv~~ 154 (161)
. .. +.++.|||| .|+++.
T Consensus 191 ~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~ 227 (741)
T 2ecf_A 191 GSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYAR 227 (741)
T ss_dssp CCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEE
T ss_pred CccceeccccceeeeeccccccceEECCCCCEEEEEE
Confidence 2 21 478999998 466554
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.34 E-value=3.7e-12 Score=99.05 Aligned_cols=138 Identities=9% Similarity=0.049 Sum_probs=93.5
Q ss_pred eecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccC-ccceeee-------eEEEecCCc-eEEEEeCCcCceeeEE
Q psy505 20 LCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD-SPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIY 90 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~-~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~ 90 (161)
+++++++..+++.+. +++|++||+.+++.+..+..+. ..+.+++ ++++++.++ |.+||+++++....+.
T Consensus 5 ~~~~~~~~~~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~~~~~~ 82 (349)
T 1jmx_B 5 PALKAGHEYMIVTNY--PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 82 (349)
T ss_dssp CCCCTTCEEEEEEET--TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccccCCCEEEEEeCC--CCeEEEEECCCCcEEEEEecCCCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcEEEEEE
Confidence 356778888887665 8999999999999888887654 1355555 455666777 9999999876543332
Q ss_pred eecCc---ceEEEEEeecCCeEEEEecCC------------CCeEEEEecCCCC---eEEEEEecCceEEEEECCcEEEE
Q psy505 91 ENSQE---DVCIVERLFSSSLVAVVSLSS------------PRKLTVCHFKRGS---EICNYSFSNTILAVKLNRKKEEE 152 (161)
Q Consensus 91 ~~~~~---~~~v~~~~fs~~~~~~~s~~~------------d~~i~iWD~~~~~---~i~~l~~~~~V~~v~~~~~~~vv 152 (161)
.++.. ...+..++|+|++..++.+.. ++.|.+||+++++ .+..+..+..+.+++|+|++-+.
T Consensus 83 ~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~l~ 162 (349)
T 1jmx_B 83 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLY 162 (349)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEE
T ss_pred cccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccccceeeeccCCCcccceeECCCCcEE
Confidence 22210 112456789998755554432 3799999999854 34455566779999999985455
Q ss_pred Eecccee
Q psy505 153 EDEEEEK 159 (161)
Q Consensus 153 ~~~~~~~ 159 (161)
+..+.|+
T Consensus 163 ~~~~~i~ 169 (349)
T 1jmx_B 163 VAGPDIY 169 (349)
T ss_dssp EESSSEE
T ss_pred EccCcEE
Confidence 5555454
|
| >3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=5e-11 Score=92.92 Aligned_cols=138 Identities=14% Similarity=0.130 Sum_probs=99.3
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
+...++++|||..+++++...++.|.+||+.+++.+..+..+...+.+++ ++++++.++ +.+||+++++....
T Consensus 142 ~~~~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~~ 221 (353)
T 3vgz_A 142 QPRELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQNTGKMSTGLALDSEGKRLYTTNADGELITIDTADNKILSR 221 (353)
T ss_dssp EEEEEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEECCCCTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEEE
T ss_pred CCceEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEecCCCCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEEE
Confidence 46778889999877665521278999999999999888886666677766 677777788 99999998875533
Q ss_pred EEeecC-cceEEEEEeecCCeE-EEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEe
Q psy505 89 IYENSQ-EDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 89 ~~~~~~-~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~ 154 (161)
+..+.. .......++|+|++. ..++...++.|.+||.++++.+..+....+ .++.|+|+ .+.+..
T Consensus 222 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~-~~~~~s~dg~~l~v~~ 290 (353)
T 3vgz_A 222 KKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILAKVAAPES-LAVLFNPARNEAYVTH 290 (353)
T ss_dssp EECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEEEEECSSC-CCEEEETTTTEEEEEE
T ss_pred EEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEEEEEcCCC-ceEEECCCCCEEEEEE
Confidence 322111 122356788998764 344455668999999999999888876444 57999887 355554
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.9e-11 Score=92.14 Aligned_cols=132 Identities=8% Similarity=-0.030 Sum_probs=92.1
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCC-CCceeeeeccC-ccceeee------eEEEec--CCc-eEEEEe--
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-LHAKTMIPAHD-SPLAALA------SLSVGT--KSG-YRLFSL-- 80 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~~~~~~l~~H~-~~V~~l~------~lasgs--~dg-iriwd~-- 80 (161)
...+.+++++|||.++++++ ++.|++||+.+ ++....+.+|. ..+.+++ +|++++ .++ .+||..
T Consensus 41 ~~~v~~~~~spdg~~l~~~~---~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~l~~~~~ 117 (297)
T 2ojh_A 41 PELFEAPNWSPDGKYLLLNS---EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPDGALYAISDKVEFGKSAIYLLPS 117 (297)
T ss_dssp SSCCEEEEECTTSSEEEEEE---TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTTSSEEEEEECTTTSSCEEEEEET
T ss_pred CcceEeeEECCCCCEEEEEc---CCeEEEEeCCCCCCceEeccccccccccceEECCCCCEEEEEEeCCCCcceEEEEEC
Confidence 44688999999999999854 78999999999 88877777764 6777777 777777 445 666665
Q ss_pred CCcCceeeEEeecCcceEEEEEeecCCeEEEE-ecCCCCeEEEEec--CCCCeEEEE-EecCceEEEEECCcE--EEEEe
Q psy505 81 NSIDTLEQIYENSQEDVCIVERLFSSSLVAVV-SLSSPRKLTVCHF--KRGSEICNY-SFSNTILAVKLNRKK--EEEED 154 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~-s~~~d~~i~iWD~--~~~~~i~~l-~~~~~V~~v~~~~~~--~vv~~ 154 (161)
.++. . ..+..+. . +..+.|+|++..++ ++..++.++||++ .+++. ..+ .+...+.++.|+|++ +++..
T Consensus 118 ~~~~-~-~~~~~~~-~--~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~-~~~~~~~~~~~~~~~s~dg~~l~~~~ 191 (297)
T 2ojh_A 118 TGGT-P-RLMTKNL-P--SYWHGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVE-TRLTHGEGRNDGPDYSPDGRWIYFNS 191 (297)
T ss_dssp TCCC-C-EECCSSS-S--EEEEEECTTSSEEEEEEEETTEEEEEEEETTTCCE-EECCCSSSCEEEEEECTTSSEEEEEE
T ss_pred CCCc-e-EEeecCC-C--ccceEECCCCCEEEEEECCCCceEEEEEECCCCcc-eEcccCCCccccceECCCCCEEEEEe
Confidence 4433 2 2333332 2 56778999876554 4556788999985 44443 333 356789999999983 55444
|
| >2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.33 E-value=1.8e-11 Score=92.29 Aligned_cols=136 Identities=11% Similarity=0.016 Sum_probs=94.5
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCC-CCceeeeeccCccceeee------eEEEec-CCc-eEEEEeC-CcCc
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-LHAKTMIPAHDSPLAALA------SLSVGT-KSG-YRLFSLN-SIDT 85 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~~~~~~l~~H~~~V~~l~------~lasgs-~dg-iriwd~~-~~~~ 85 (161)
.+..++++|||..+++++.. |+.++||++.. +.....+..|...+.+++ +|+.++ .++ ++||++. .+..
T Consensus 130 ~~~~~~~spdg~~l~~~~~~-~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~~~~ 208 (297)
T 2ojh_A 130 PSYWHGWSPDGKSFTYCGIR-DQVFDIYSMDIDSGVETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVDGSS 208 (297)
T ss_dssp SEEEEEECTTSSEEEEEEEE-TTEEEEEEEETTTCCEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSC
T ss_pred CccceEECCCCCEEEEEECC-CCceEEEEEECCCCcceEcccCCCccccceECCCCCEEEEEecCCCCccEEEECCCCCC
Confidence 36778899999998865553 89999999642 344567778888898888 555444 577 9999986 3443
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCC-----------CeEEEEecCCCCeEEEE---EecCceEEEEECCc--E
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSP-----------RKLTVCHFKRGSEICNY---SFSNTILAVKLNRK--K 149 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d-----------~~i~iWD~~~~~~i~~l---~~~~~V~~v~~~~~--~ 149 (161)
. ..+..|. ..+..+.|+|++..++.++.+ +.|.+||+++++..... .+...|..+.|+|+ .
T Consensus 209 ~-~~~~~~~--~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~ 285 (297)
T 2ojh_A 209 V-ERITDSA--YGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNVETLFDLFGGQGTMNSPNWSPDGDE 285 (297)
T ss_dssp E-EECCCCS--EEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSCEEEEEEEESTTTSCSCCBCTTSSE
T ss_pred c-EEEecCC--cccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCceeeeccCCCCcccccceECCCCCE
Confidence 4 3334443 356778999988655543322 56999999988764333 24578999999997 4
Q ss_pred EEEEec
Q psy505 150 EEEEDE 155 (161)
Q Consensus 150 ~vv~~~ 155 (161)
++++..
T Consensus 286 l~~~~~ 291 (297)
T 2ojh_A 286 FAYVRY 291 (297)
T ss_dssp EEEEEE
T ss_pred EEEEEe
Confidence 555443
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.33 E-value=6.1e-12 Score=107.80 Aligned_cols=133 Identities=10% Similarity=0.006 Sum_probs=93.8
Q ss_pred eeEEeecCCCceEEEEcCCC-------CcceEEEEEcCCCCc--eeeeeccCccceeee------eEEEecCCceEEEEe
Q psy505 16 GICCLCVNSDNCYLAYPGSN-------SIGEVQIFDADNLHA--KTMIPAHDSPLAALA------SLSVGTKSGYRLFSL 80 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~-------~dg~v~iWd~~~~~~--~~~l~~H~~~V~~l~------~lasgs~dgiriwd~ 80 (161)
++..++++|||++||+++.. .++.+.+||+.+++. +....+|...+.+++ .||.++.+.|++||+
T Consensus 62 ~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~ 141 (723)
T 1xfd_A 62 RAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAH 141 (723)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEESS
T ss_pred ccceEEECCCCCEEEEEecCccceeecceeeEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEECCeEEEEEC
Confidence 47889999999999987531 037899999999876 222335555577776 888888755999999
Q ss_pred CCcCceeeEEeecCcce----------------EEEEEeecCCeEEEEecCCC---------------------------
Q psy505 81 NSIDTLEQIYENSQEDV----------------CIVERLFSSSLVAVVSLSSP--------------------------- 117 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~----------------~v~~~~fs~~~~~~~s~~~d--------------------------- 117 (161)
.+++.. .+...+...+ .+..++||||+..++.++.|
T Consensus 142 ~~g~~~-~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (723)
T 1xfd_A 142 VGKQAI-RVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLAYAAINDSRVPIMELPTYTGSIYPTVKPYHYPK 220 (723)
T ss_dssp SSSCCE-EEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEEEEEEECTTSCEEEECCCSSSSSCCCEEEECCB
T ss_pred CCCceE-EEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEEEEEECCCccceEEeeccCCcCCCcceeccCCC
Confidence 988754 3433322221 11578899998666654322
Q ss_pred -------CeEEEEecCCCCeEEEEEe-------cCceEEEEECCcE
Q psy505 118 -------RKLTVCHFKRGSEICNYSF-------SNTILAVKLNRKK 149 (161)
Q Consensus 118 -------~~i~iWD~~~~~~i~~l~~-------~~~V~~v~~~~~~ 149 (161)
.+|++||+.++++...+.. ...+.+++|+||+
T Consensus 221 ~G~~~~~~~l~~~d~~~~~~~~~l~~~~~~~~~~~~~~~~~~SpDg 266 (723)
T 1xfd_A 221 AGSENPSISLHVIGLNGPTHDLEMMPPDDPRMREYYITMVKWATST 266 (723)
T ss_dssp TTSCCCEEEEEEEESSSSCCCEECCCCCCGGGSSEEEEEEEESSSS
T ss_pred CCCCCCeeEEEEEECCCCceeEEeeCCccCCCccceeEEEEEeCCC
Confidence 2799999999986556542 3578999999994
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.33 E-value=6.4e-11 Score=91.98 Aligned_cols=128 Identities=8% Similarity=0.053 Sum_probs=90.3
Q ss_pred CCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eE-EEecCCc-eEEEEeCCcCceeeEEeecC
Q psy505 23 NSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SL-SVGTKSG-YRLFSLNSIDTLEQIYENSQ 94 (161)
Q Consensus 23 ~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~l-asgs~dg-iriwd~~~~~~~~~~~~~~~ 94 (161)
.+++..+..++.. ++.|++||+.+++.+..+..+..++ +++ ++ +++..++ |.+||.++++........+.
T Consensus 6 ~~~~~~~~v~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~ 83 (331)
T 3u4y_A 6 QTTSNFGIVVEQH-LRRISFFSTDTLEILNQITLGYDFV-DTAITSDCSNVVVTSDFCQTLVQIETQLEPPKVVAIQEGQ 83 (331)
T ss_dssp -CCCCEEEEEEGG-GTEEEEEETTTCCEEEEEECCCCEE-EEEECSSSCEEEEEESTTCEEEEEECSSSSCEEEEEEECS
T ss_pred cCCCCEEEEEecC-CCeEEEEeCcccceeeeEEccCCcc-eEEEcCCCCEEEEEeCCCCeEEEEECCCCceeEEecccCC
Confidence 4444443333442 8999999999999988888777666 776 34 4444466 99999999875234444444
Q ss_pred cceEEEEEeecCCeEEEEecCCC-C--eEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEe
Q psy505 95 EDVCIVERLFSSSLVAVVSLSSP-R--KLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 95 ~~~~v~~~~fs~~~~~~~s~~~d-~--~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~ 154 (161)
.. ..+++|+|++..++....+ + .|.+||.++++.+..+.......+++|+|+ .++++.
T Consensus 84 ~~--~~~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~ 146 (331)
T 3u4y_A 84 SS--MADVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIPIPYDAVGIAISPNGNGLILID 146 (331)
T ss_dssp SC--CCCEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEECCTTEEEEEECTTSSCEEEEE
T ss_pred CC--ccceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEECCCCccceEECCCCCEEEEEe
Confidence 32 2237899987666554444 3 899999999999888887777899999998 355553
|
| >1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24 | Back alignment and structure |
|---|
Probab=99.31 E-value=2.3e-12 Score=110.41 Aligned_cols=133 Identities=10% Similarity=0.048 Sum_probs=95.5
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCc---cceeee------eEEEecCC---------c-eEE
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS---PLAALA------SLSVGTKS---------G-YRL 77 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~---~V~~l~------~lasgs~d---------g-iri 77 (161)
..+++++|||.++++ +. ||+|++||+.++++...+.+|.. .|.+++ +||+++.+ + +.+
T Consensus 19 ~~~~~~spdg~~~~~-~~--dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~~i~~ 95 (723)
T 1xfd_A 19 DPEAKWISDTEFIYR-EQ--KGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVL 95 (723)
T ss_dssp CCCCCBSSSSCBCCC-CS--SSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEE
T ss_pred ccccEEcCCCcEEEE-eC--CCCEEEEECCCCcEEEEeccccccccccceEEECCCCCEEEEEecCccceeecceeeEEE
Confidence 567889999997654 44 89999999999999888888875 388877 78888764 5 889
Q ss_pred EEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-cCce----------------
Q psy505 78 FSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-SNTI---------------- 140 (161)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~~V---------------- 140 (161)
||+++++. ..+.....+...+..++||||+..++..+. +.|++||+.+++....... ...+
T Consensus 96 ~d~~~~~~-~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~ 173 (723)
T 1xfd_A 96 SKIPHGDP-QSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILK 173 (723)
T ss_dssp EESSSCCC-EECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSS
T ss_pred EECCCCce-EeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCCCceEEEecCCCCCceECcccceeEEEEecc
Confidence 99998864 222221111112556789999866665543 6899999999887655443 3333
Q ss_pred --EEEEECCc--EEEEEe
Q psy505 141 --LAVKLNRK--KEEEED 154 (161)
Q Consensus 141 --~~v~~~~~--~~vv~~ 154 (161)
.+++|||| .|+.+.
T Consensus 174 ~~~~~~~SpDg~~la~~~ 191 (723)
T 1xfd_A 174 THIAHWWSPDGTRLAYAA 191 (723)
T ss_dssp SSEEEEECTTSSEEEEEE
T ss_pred CcceEEECCCCCEEEEEE
Confidence 78999998 455554
|
| >3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans} | Back alignment and structure |
|---|
Probab=99.30 E-value=1.8e-10 Score=89.37 Aligned_cols=131 Identities=11% Similarity=0.052 Sum_probs=91.4
Q ss_pred eecCCCceEEEEcCCCCc-c--eEEEEEcCCCCceeeeeccCccceeee-------eEEEecC-Cc-eEEEEeCCcCcee
Q psy505 20 LCVNSDNCYLAYPGSNSI-G--EVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTK-SG-YRLFSLNSIDTLE 87 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~d-g--~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~-dg-iriwd~~~~~~~~ 87 (161)
++++|||.+++++.. + + .|++||+.+++.+..+..+.. ..+++ +++++.. +. +++|++.....+.
T Consensus 89 ~~~s~dg~~l~~~~~--~~~~~~i~v~d~~~~~~~~~~~~~~~-~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 89 VDITPDDQFAVTVTG--LNHPFNMQSYSFLKNKFISTIPIPYD-AVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp EEECTTSSEEEECCC--SSSSCEEEEEETTTTEEEEEEECCTT-EEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred eEECCCCCEEEEecC--CCCcccEEEEECCCCCeEEEEECCCC-ccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 677889998885443 4 3 999999999998888876655 36666 4444444 55 9999987644331
Q ss_pred eE-EeecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecCCCCe---EEEEEecCceEEEEECCcE--EEEE
Q psy505 88 QI-YENSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGSE---ICNYSFSNTILAVKLNRKK--EEEE 153 (161)
Q Consensus 88 ~~-~~~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~~---i~~l~~~~~V~~v~~~~~~--~vv~ 153 (161)
.. ...-........++|+|++. .++++..++.|.+||+++++. +..+.....+.+++|+|++ +++.
T Consensus 166 ~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~ 238 (331)
T 3u4y_A 166 DTGQEFISGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPENITLLNAVGTNNLPGTIVVSRDGSTVYVL 238 (331)
T ss_dssp EEEEEEECSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTSCEEEEEEECSSCCCCEEECTTSSEEEEE
T ss_pred ecCCccccCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcccceeeeccCCCCCceEEECCCCCEEEEE
Confidence 11 01000011246788999884 556666778999999999998 7777777888999999983 4444
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.28 E-value=1.3e-10 Score=89.79 Aligned_cols=138 Identities=10% Similarity=0.038 Sum_probs=88.4
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCC-CCcee----eeecc-Cccceeee------eE-EEecCCc-eEEEEeC
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-LHAKT----MIPAH-DSPLAALA------SL-SVGTKSG-YRLFSLN 81 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-~~~~~----~l~~H-~~~V~~l~------~l-asgs~dg-iriwd~~ 81 (161)
.+..++++|||.++++++.. ++.|++||+.+ ++... .+..+ ...+.+++ ++ +++..++ +++||+.
T Consensus 130 ~~~~~~~s~dg~~l~~~~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~ 208 (343)
T 1ri6_A 130 GCHSANISPDNRTLWVPALK-QDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELK 208 (343)
T ss_dssp TBCCCEECTTSSEEEEEEGG-GTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESS
T ss_pred CceEEEECCCCCEEEEecCC-CCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEec
Confidence 35677789999888776643 89999999987 65432 23332 33566666 34 4555777 9999995
Q ss_pred --CcCce-eeEEe----ecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecC--CC--CeEEEEEecCceEEEEECCc-
Q psy505 82 --SIDTL-EQIYE----NSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFK--RG--SEICNYSFSNTILAVKLNRK- 148 (161)
Q Consensus 82 --~~~~~-~~~~~----~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~--~~--~~i~~l~~~~~V~~v~~~~~- 148 (161)
+++.. ..... ++.+...+..++|+|++. .++++..++.|++||+. ++ +.+..+.....+.+++|+|+
T Consensus 209 ~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~~~~~s~dg 288 (343)
T 1ri6_A 209 DPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVSEDGSVLSKEGFQPTETQPRGFNVDHSG 288 (343)
T ss_dssp CTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCCEEEEEEEECSSSCCCEEECTTS
T ss_pred CCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEcCCCCceEEeeeecCCCccceEEECCCC
Confidence 34321 11111 111123455789999874 44466678899999998 33 34444544455899999997
Q ss_pred -EEEEEe
Q psy505 149 -KEEEED 154 (161)
Q Consensus 149 -~~vv~~ 154 (161)
.++++.
T Consensus 289 ~~l~~~~ 295 (343)
T 1ri6_A 289 KYLIAAG 295 (343)
T ss_dssp SEEEEEC
T ss_pred CEEEEec
Confidence 455555
|
| >1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1 | Back alignment and structure |
|---|
Probab=99.27 E-value=5.1e-11 Score=92.18 Aligned_cols=134 Identities=9% Similarity=-0.003 Sum_probs=87.1
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcC--CCC--ceeeeeccCccceeee------eE-EEecCCc-eEEEEeCCc
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDAD--NLH--AKTMIPAHDSPLAALA------SL-SVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~--~~~--~~~~l~~H~~~V~~l~------~l-asgs~dg-iriwd~~~~ 83 (161)
.+..++++|||.++++++.. ++.|++||+. +++ .+..+..+. .+.+++ +| +++..++ |++||+..+
T Consensus 39 ~~~~~~~spdg~~l~~~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~ 116 (343)
T 1ri6_A 39 QVQPMVVSPDKRYLYVGVRP-EFRVLAYRIAPDDGALTFAAESALPG-SLTHISTDHQGQFVFVGSYNAGNVSVTRLEDG 116 (343)
T ss_dssp CCCCEEECTTSSEEEEEETT-TTEEEEEEECTTTCCEEEEEEEECSS-CCSEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CCceEEECCCCCEEEEeecC-CCeEEEEEecCCCCceeeccccccCC-CCcEEEEcCCCCEEEEEecCCCeEEEEECCCC
Confidence 45567889999988887763 5999999998 555 345566554 677776 45 4455577 999999433
Q ss_pred Cc--eeeEEeecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecCC-CCeEE----EEEe--cCceEEEEECCcE--EE
Q psy505 84 DT--LEQIYENSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKR-GSEIC----NYSF--SNTILAVKLNRKK--EE 151 (161)
Q Consensus 84 ~~--~~~~~~~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~-~~~i~----~l~~--~~~V~~v~~~~~~--~v 151 (161)
.. ......++. .+.+++|+|++. .++++..++.|++||+.+ ++... .+.. ...+..++|+|++ ++
T Consensus 117 ~~~~~~~~~~~~~---~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~ 193 (343)
T 1ri6_A 117 LPVGVVDVVEGLD---GCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPNEQYAY 193 (343)
T ss_dssp EEEEEEEEECCCT---TBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTTSSEEE
T ss_pred ccccccccccCCC---CceEEEECCCCCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcceEEECCCCCEEE
Confidence 21 112222322 255678999874 333433678999999998 65433 2222 3478899999983 54
Q ss_pred EEe
Q psy505 152 EED 154 (161)
Q Consensus 152 v~~ 154 (161)
++.
T Consensus 194 ~~~ 196 (343)
T 1ri6_A 194 CVN 196 (343)
T ss_dssp EEE
T ss_pred EEe
Confidence 443
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.24 E-value=9.5e-11 Score=90.44 Aligned_cols=129 Identities=13% Similarity=0.133 Sum_probs=88.4
Q ss_pred EEEEcCCCCcceEEEEEcCCCCceeeeeccCc--cceeee-------eEEEecCCc-eEEEEeCCcCceeeEEeecCc--
Q psy505 28 YLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS--PLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQE-- 95 (161)
Q Consensus 28 ~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~--~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~-- 95 (161)
++++++. ++.|++||+.+++.+..+..... .+.+++ ++++++.++ |.+||+.+++.+..+..++.+
T Consensus 3 ~~v~~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~ 80 (337)
T 1pby_B 3 YILAPAR--PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLSTPEER 80 (337)
T ss_dssp EEEEEET--TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECCBTTEE
T ss_pred EEEEcCC--CCeEEEEECCCCcEEEEEEcCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcCCcccc
Confidence 5565554 89999999999998888874331 356666 456777777 999999988755333222200
Q ss_pred ceEEEEEeecCCeEEEEecC------------CCCeEEEEecCCCCeEEEEEecCceEEEEECCcE--EEEEecccee
Q psy505 96 DVCIVERLFSSSLVAVVSLS------------SPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK--EEEEDEEEEK 159 (161)
Q Consensus 96 ~~~v~~~~fs~~~~~~~s~~------------~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~--~vv~~~~~~~ 159 (161)
...+..++|+|++..++.+. .++.|.+||+++++.+..+.....+.+++|+|++ +++. .+.|+
T Consensus 81 ~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~-~~~i~ 157 (337)
T 1pby_B 81 VKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARDGSKLYGL-GRDLH 157 (337)
T ss_dssp EECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTTSSCEEEE-SSSEE
T ss_pred cccccceEECCCCCEEEEEecccccccccccccCceEEEEECCCCcEEEEEeCCCCcceeEECCCCCEEEEe-CCeEE
Confidence 01234678999874333331 3689999999999988877777788899999983 4444 55554
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.1e-09 Score=85.87 Aligned_cols=135 Identities=11% Similarity=0.075 Sum_probs=88.1
Q ss_pred EEeecCCCceEEEEcC-CCCcceEEEEEcCCCC--ceeeeeccCccceeee------eEEEec-CCc-eEEEEeCCcCce
Q psy505 18 CCLCVNSDNCYLAYPG-SNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA------SLSVGT-KSG-YRLFSLNSIDTL 86 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g-~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~------~lasgs-~dg-iriwd~~~~~~~ 86 (161)
..++++|||..++++. . .++.|++||+.+++ .+..+..|...+..++ +|++++ .++ +++||+.....+
T Consensus 43 ~~~a~spdg~l~~~~~~~-~~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spdg~~l~~~~~~~~~v~v~~~~~~g~~ 121 (347)
T 3hfq_A 43 TYLALSAKDCLYSVDKED-DEGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEARQLVYSANYHKGTAEVMKIAADGAL 121 (347)
T ss_dssp CCEEECTTCEEEEEEEET-TEEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETTTTEEEEEETTTTEEEEEEECTTSCE
T ss_pred ceEEEccCCeEEEEEecC-CCceEEEEEecCCcEEEeeeeecCCCCCEEEEECCCCCEEEEEeCCCCEEEEEEeCCCCCe
Confidence 3567788998444332 2 26899999998775 4455566777888877 566665 677 999999532223
Q ss_pred eeEEee-cCc--------ceEEEEEeecCCeEEEEecCCCCeEEEEecC-CCCeEEE--EEe--cCceEEEEECCcE--E
Q psy505 87 EQIYEN-SQE--------DVCIVERLFSSSLVAVVSLSSPRKLTVCHFK-RGSEICN--YSF--SNTILAVKLNRKK--E 150 (161)
Q Consensus 87 ~~~~~~-~~~--------~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~-~~~~i~~--l~~--~~~V~~v~~~~~~--~ 150 (161)
..+... +.+ ...+..++|+|++..++++..++.|++||+. +++.... +.. ...+..++|+|++ +
T Consensus 122 ~~~~~~~~~~~~p~~~~~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l 201 (347)
T 3hfq_A 122 TLTDTVQHSGHGPRPEQDGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYA 201 (347)
T ss_dssp EEEEEEECCCCCSSTTCSSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEE
T ss_pred eecceeecCCCCCCccccCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEE
Confidence 222211 110 1136678999988777777778899999998 5654322 222 2368889999983 5
Q ss_pred EEE
Q psy505 151 EEE 153 (161)
Q Consensus 151 vv~ 153 (161)
+++
T Consensus 202 ~v~ 204 (347)
T 3hfq_A 202 FLA 204 (347)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
|
| >1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B* | Back alignment and structure |
|---|
Probab=99.22 E-value=2.4e-10 Score=88.73 Aligned_cols=113 Identities=11% Similarity=0.035 Sum_probs=77.9
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccC------ccceeee------eEEEecCC----------
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD------SPLAALA------SLSVGTKS---------- 73 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~------~~V~~l~------~lasgs~d---------- 73 (161)
+...++++|||..+++++.. ++.|.+||+.+++.+..+..+. ..+.+++ +|++++.+
T Consensus 44 ~~~~~~~s~dg~~~~v~~~~-~~~i~~~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~ 122 (349)
T 1jmx_B 44 GPGTAMMAPDNRTAYVLNNH-YGDIYGIDLDTCKNTFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVV 122 (349)
T ss_dssp SSCEEEECTTSSEEEEEETT-TTEEEEEETTTTEEEEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEE
T ss_pred CCceeEECCCCCEEEEEeCC-CCcEEEEeCCCCcEEEEEEcccccccccccccceEECCCCCEEEEEccccccccccccc
Confidence 35567788999866555543 8999999999998887776432 2366666 67777754
Q ss_pred --c-eEEEEeCCcCcee--eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 74 --G-YRLFSLNSIDTLE--QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 74 --g-iriwd~~~~~~~~--~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
+ |.+||+++++... ..+..+. .+.+++|+|++..++++ +.|.+||.++++.+..+.
T Consensus 123 ~~~~i~~~d~~~~~~~~~~~~~~~~~---~~~~~~~s~dg~l~~~~---~~i~~~d~~~~~~~~~~~ 183 (349)
T 1jmx_B 123 KPPRLEVFSTADGLEAKPVRTFPMPR---QVYLMRAADDGSLYVAG---PDIYKMDVKTGKYTVALP 183 (349)
T ss_dssp CCCEEEEEEGGGGGGBCCSEEEECCS---SCCCEEECTTSCEEEES---SSEEEECTTTCCEEEEEC
T ss_pred CCCeEEEEECCCccccceeeeccCCC---cccceeECCCCcEEEcc---CcEEEEeCCCCceecccc
Confidence 6 9999998854332 2222222 25577899988755532 349999999999877664
|
| >2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia} | Back alignment and structure |
|---|
Probab=99.21 E-value=4.4e-11 Score=102.89 Aligned_cols=134 Identities=14% Similarity=0.065 Sum_probs=96.0
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee------eEEEecCCceEEEEeCCcCcee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA------SLSVGTKSGYRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~------~lasgs~dgiriwd~~~~~~~~ 87 (161)
++..++++|||++|++++ ++.|++||+.+++ .+..+..|...+.+++ +||.++++.|++||+.+++..
T Consensus 110 ~v~~~~~SpDg~~l~~~~---~~~i~~~d~~~~~~~~~~~l~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~g~~~- 185 (741)
T 2ecf_A 110 GIVDYQWSPDAQRLLFPL---GGELYLYDLKQEGKAAVRQLTHGEGFATDAKLSPKGGFVSFIRGRNLWVIDLASGRQM- 185 (741)
T ss_dssp ESCCCEECTTSSEEEEEE---TTEEEEEESSSCSTTSCCBCCCSSSCEEEEEECTTSSEEEEEETTEEEEEETTTTEEE-
T ss_pred CcceeEECCCCCEEEEEe---CCcEEEEECCCCCcceEEEcccCCcccccccCCCCCCEEEEEeCCcEEEEecCCCCEE-
Confidence 477889999999999865 4899999999883 4567888888898888 788888666999999887543
Q ss_pred eEEeecCcce--------------EEEEEeecCCeEEEEecCCCC---------------------------------eE
Q psy505 88 QIYENSQEDV--------------CIVERLFSSSLVAVVSLSSPR---------------------------------KL 120 (161)
Q Consensus 88 ~~~~~~~~~~--------------~v~~~~fs~~~~~~~s~~~d~---------------------------------~i 120 (161)
.+...+...+ .+..++||||+..++.++.|+ .|
T Consensus 186 ~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~~~~l 265 (741)
T 2ecf_A 186 QLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANVQVKL 265 (741)
T ss_dssp ECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCCEEEE
T ss_pred EeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCCeeEE
Confidence 3333222111 024678999886665543333 78
Q ss_pred EEEecCC-CCeEEEE---EecCceEEEEECCc--EEEEEe
Q psy505 121 TVCHFKR-GSEICNY---SFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 121 ~iWD~~~-~~~i~~l---~~~~~V~~v~~~~~--~~vv~~ 154 (161)
.+||+.+ ++..... .+...+.+++| || .+++..
T Consensus 266 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~~-pDg~~l~~~~ 304 (741)
T 2ecf_A 266 GVISPAEQAQTQWIDLGKEQDIYLARVNW-RDPQHLSFQR 304 (741)
T ss_dssp EEECSSTTCCCEEECCCSCSSEEEEEEEE-EETTEEEEEE
T ss_pred EEEECCCCCceEEecCCCCcceEEEEEEe-CCCCEEEEEE
Confidence 9999998 8765433 14467899999 97 455443
|
| >1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.5e-10 Score=88.07 Aligned_cols=131 Identities=15% Similarity=0.125 Sum_probs=90.7
Q ss_pred eEEeecCCCceEEEEcCC-----------CCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEE
Q psy505 17 ICCLCVNSDNCYLAYPGS-----------NSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLF 78 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~-----------~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriw 78 (161)
+..++++|||.+++++.. . ++.|.+||+.+++.+..+... ..+.+++ +|+++ ++ +++|
T Consensus 84 ~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~-~~~i~v~d~~~~~~~~~~~~~-~~~~~~~~s~dg~~l~~~--~~~i~~~ 159 (337)
T 1pby_B 84 LFGAALSPDGKTLAIYESPVRLELTHFEVQ-PTRVALYDAETLSRRKAFEAP-RQITMLAWARDGSKLYGL--GRDLHVM 159 (337)
T ss_dssp TTCEEECTTSSEEEEEEEEEEECSSCEEEC-CCEEEEEETTTTEEEEEEECC-SSCCCEEECTTSSCEEEE--SSSEEEE
T ss_pred ccceEECCCCCEEEEEeccccccccccccc-CceEEEEECCCCcEEEEEeCC-CCcceeEECCCCCEEEEe--CCeEEEE
Confidence 446677899988877631 1 689999999998888777753 3456665 56555 46 9999
Q ss_pred EeCCcCceeeEEeec--C---------------------------------------------------c----------
Q psy505 79 SLNSIDTLEQIYENS--Q---------------------------------------------------E---------- 95 (161)
Q Consensus 79 d~~~~~~~~~~~~~~--~---------------------------------------------------~---------- 95 (161)
|+++++....+..++ . .
T Consensus 160 d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~~~~ 239 (337)
T 1pby_B 160 DPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIM 239 (337)
T ss_dssp ETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEEEEEEC
T ss_pred ECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEeecCCC
Confidence 998875432211111 0 0
Q ss_pred ceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEE
Q psy505 96 DVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEE 153 (161)
Q Consensus 96 ~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~ 153 (161)
......++|+|++..++.+ ++.|.+||+++++.+..+.....+.+++|+|+ .+++.
T Consensus 240 ~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~ 297 (337)
T 1pby_B 240 DVFYFSTAVNPAKTRAFGA--YNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLG 297 (337)
T ss_dssp SSCEEEEEECTTSSEEEEE--ESEEEEEETTTTEEEEEEECSSCCCEEEECTTSCEEEEE
T ss_pred CCceeeEEECCCCCEEEEe--CCeEEEEECCCCcCcceecCCCceeeEEECCCCCEEEEE
Confidence 0012347899987655554 57999999999998888877778899999997 35554
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-09 Score=86.32 Aligned_cols=133 Identities=13% Similarity=0.069 Sum_probs=95.6
Q ss_pred eecCCCceEEEEcCCCCcc--eEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEE
Q psy505 20 LCVNSDNCYLAYPGSNSIG--EVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIY 90 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg--~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~ 90 (161)
.+++|||.+|++.+.. +| .|.+||+.+++......+|...+.++. .|+.++.++ +++||+.+++.. .++
T Consensus 41 ~~~SpDg~~l~~~~~~-~g~~~l~~~d~~~g~~~~lt~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~g~~~-~~~ 118 (388)
T 3pe7_A 41 KCFTRDGSKLLFGGAF-DGPWNYYLLDLNTQVATQLTEGRGDNTFGGFLSPDDDALFYVKDGRNLMRVDLATLEEN-VVY 118 (388)
T ss_dssp CCBCTTSCEEEEEECT-TSSCEEEEEETTTCEEEECCCSSCBCSSSCEECTTSSEEEEEETTTEEEEEETTTCCEE-EEE
T ss_pred ccCCCCCCEEEEEEcC-CCCceEEEEeCCCCceEEeeeCCCCCccceEEcCCCCEEEEEeCCCeEEEEECCCCcce-eee
Confidence 6789999999998763 67 488889999988777777776665444 788888887 999999998743 455
Q ss_pred eecCcceEEEEEeecCCeEEEEe----------------------cCCCCeEEEEecCCCCeEEEEEecCceEEEEECC-
Q psy505 91 ENSQEDVCIVERLFSSSLVAVVS----------------------LSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNR- 147 (161)
Q Consensus 91 ~~~~~~~~v~~~~fs~~~~~~~s----------------------~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~- 147 (161)
..+..........++|++..++. ...+..|.+||+++++..........+..++|+|
T Consensus 119 ~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~~~~~~~~~~~~sp~ 198 (388)
T 3pe7_A 119 QVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVILQENQWLGHPIYRPY 198 (388)
T ss_dssp ECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEEEESSCEEEEEEETT
T ss_pred echhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECCCCceEEeecCCccccccEECCC
Confidence 55543222234455888776652 2344689999999998655555677899999999
Q ss_pred cE--EEEEe
Q psy505 148 KK--EEEED 154 (161)
Q Consensus 148 ~~--~vv~~ 154 (161)
++ ++.+.
T Consensus 199 dg~~l~~~~ 207 (388)
T 3pe7_A 199 DDSTVAFCH 207 (388)
T ss_dssp EEEEEEEEE
T ss_pred CCCEEEEEE
Confidence 73 44444
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.20 E-value=2.3e-10 Score=102.93 Aligned_cols=132 Identities=10% Similarity=-0.039 Sum_probs=100.8
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEE-EEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQ-IFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~-iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
.+..++++ ||..+++.+. ++.+. +||+.+++.. .+.+|...+.+++ +||+++.++ +++||+++++..
T Consensus 339 ~~~~~~~s-dg~~l~~~s~--~~~l~~~~d~~~~~~~-~l~~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~- 413 (1045)
T 1k32_A 339 RYVRRGGD-TKVAFIHGTR--EGDFLGIYDYRTGKAE-KFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPT- 413 (1045)
T ss_dssp EEEEECSS-SEEEEEEEET--TEEEEEEEETTTCCEE-ECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCEE-
T ss_pred eEEeeeEc-CCCeEEEEEC--CCceEEEEECCCCCce-EecCCccceeeeEECCCCCEEEEECCCCeEEEEECCCCceE-
Confidence 67889999 9999998775 67888 9999887654 4558888888888 899999998 999999998743
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCC----------CCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEe
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSS----------PRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~----------d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~ 154 (161)
.+..+|... +..++|||++..++.++. ++.|++||+.+++ +..+. +...+.+++|+|+ .+++..
T Consensus 414 ~~~~~~~~~--v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~g~-~~~l~~~~~~~~~~~~spdG~~l~~~s 490 (1045)
T 1k32_A 414 VIERSREAM--ITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRK-IFAATTENSHDYAPAFDADSKNLYYLS 490 (1045)
T ss_dssp EEEECSSSC--CCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTE-EEECSCSSSBEEEEEECTTSCEEEEEE
T ss_pred EeccCCCCC--ccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCCCc-EEEeeCCCcccCCceEcCCCCEEEEEe
Confidence 555566543 567889999876665433 2489999999887 44443 5678899999998 355444
Q ss_pred c
Q psy505 155 E 155 (161)
Q Consensus 155 ~ 155 (161)
.
T Consensus 491 ~ 491 (1045)
T 1k32_A 491 Y 491 (1045)
T ss_dssp S
T ss_pred c
Confidence 3
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=99.16 E-value=3.8e-09 Score=83.33 Aligned_cols=136 Identities=10% Similarity=0.000 Sum_probs=85.7
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc------e------eee-eccCccceeee------eEEEec-CCc-e
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA------K------TMI-PAHDSPLAALA------SLSVGT-KSG-Y 75 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~------~------~~l-~~H~~~V~~l~------~lasgs-~dg-i 75 (161)
+..++++|||.++++++.. ++.|++|++..... + ..+ ..+....++++ ++++++ .++ |
T Consensus 157 ~~~~~~spdg~~l~~~~~~-~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~~v 235 (361)
T 3scy_A 157 LHCVRITPDGKYLLADDLG-TDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGGTV 235 (361)
T ss_dssp EEEEEECTTSSEEEEEETT-TTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTCEE
T ss_pred ceEEEECCCCCEEEEEeCC-CCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCCeE
Confidence 4568889999877666653 88999999876442 1 111 22334456666 455444 567 9
Q ss_pred EEEEeCCcCceeeEEee--c-CcceEEEEEeecCCeEEE-EecCC-CCeEEEEecC--CCC--eEEEEEecCceEEEEEC
Q psy505 76 RLFSLNSIDTLEQIYEN--S-QEDVCIVERLFSSSLVAV-VSLSS-PRKLTVCHFK--RGS--EICNYSFSNTILAVKLN 146 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~--~-~~~~~v~~~~fs~~~~~~-~s~~~-d~~i~iWD~~--~~~--~i~~l~~~~~V~~v~~~ 146 (161)
++||+++++. ...... . .+......++|+|++..+ ++... +++|.|||+. +++ .+..+.....+.+++|+
T Consensus 236 ~v~~~~~g~~-~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~g~~~~~~~~~~g~~~~~~~~s 314 (361)
T 3scy_A 236 IAFRYADGML-DEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETNGTLTKVGYQLTGIHPRNFIIT 314 (361)
T ss_dssp EEEEEETTEE-EEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTTCCEEEEEEEECSSCCCEEEEC
T ss_pred EEEEecCCce-EEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCCCcEEEeeEecCCCCCceEEEC
Confidence 9999987642 122111 1 111224688999998655 55555 6899999985 455 33333334578899999
Q ss_pred Cc--EEEEEe
Q psy505 147 RK--KEEEED 154 (161)
Q Consensus 147 ~~--~~vv~~ 154 (161)
|+ .++++.
T Consensus 315 pdg~~l~~~~ 324 (361)
T 3scy_A 315 PNGKYLLVAC 324 (361)
T ss_dssp TTSCEEEEEE
T ss_pred CCCCEEEEEE
Confidence 98 366654
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2e-10 Score=98.41 Aligned_cols=130 Identities=9% Similarity=0.032 Sum_probs=88.4
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCC-----CCceeeeeccCcc--------------ceeee------eEEEe
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADN-----LHAKTMIPAHDSP--------------LAALA------SLSVG 70 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~-----~~~~~~l~~H~~~--------------V~~l~------~lasg 70 (161)
.+..++++|||..+|++ . |+.|++||+.+ ++.......+... +.+++ +||++
T Consensus 122 ~~~~~~~SpdG~~la~~-~--~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~ 198 (706)
T 2z3z_A 122 ETASLDFSPVGDRVAYV-R--NHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFY 198 (706)
T ss_dssp CCTTCEECTTSSEEEEE-E--TTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEE
T ss_pred cccCCcCCCCCCEEEEE-E--CCeEEEEecCcccccCCCcEEeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEE
Confidence 35567789999999985 3 89999999998 8776655544443 35665 77777
Q ss_pred c---------------------------------CCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCC
Q psy505 71 T---------------------------------KSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSS 116 (161)
Q Consensus 71 s---------------------------------~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~ 116 (161)
+ .+. +++||+++++.. .+..+..+...+..++|+|++..++.++.
T Consensus 199 ~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~-~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 277 (706)
T 2z3z_A 199 RMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTV-YLQTGEPKEKFLTNLSWSPDENILYVAEV 277 (706)
T ss_dssp EEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEE-ECCCCSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred EECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceE-eeccCCCCceeEeeEEEECCCCEEEEEEe
Confidence 6 345 999999887633 33322222345788999999865555433
Q ss_pred CC-----eEEEEecCCCCeEEEEE-e--cC---ceEEEEECC--cE
Q psy505 117 PR-----KLTVCHFKRGSEICNYS-F--SN---TILAVKLNR--KK 149 (161)
Q Consensus 117 d~-----~i~iWD~~~~~~i~~l~-~--~~---~V~~v~~~~--~~ 149 (161)
++ +|.+||+.+++....+. . .. .+.+++|+| ++
T Consensus 278 ~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~sp~~dg 323 (706)
T 2z3z_A 278 NRAQNECKVNAYDAETGRFVRTLFVETDKHYVEPLHPLTFLPGSNN 323 (706)
T ss_dssp CTTSCEEEEEEEETTTCCEEEEEEEEECSSCCCCCSCCEECTTCSS
T ss_pred CCCCCeeEEEEEECCCCceeeEEEEccCCCeECccCCceeecCCCC
Confidence 43 89999999995444432 2 22 346789999 73
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.2e-09 Score=89.35 Aligned_cols=121 Identities=15% Similarity=0.211 Sum_probs=95.5
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCcee
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~~ 87 (161)
.+. |..++| |+.+|+++ . +|.|++||+.+......+..|+.++.++. -+|+++.|| +.+||+.++...
T Consensus 87 lp~-V~~l~f--d~~~L~v~-~--~~~l~v~dv~sl~~~~~~~~~~~~v~~i~~~~p~~av~~~dG~L~v~dl~~~~~~- 159 (388)
T 1xip_A 87 IPD-VIFVCF--HGDQVLVS-T--RNALYSLDLEELSEFRTVTSFEKPVFQLKNVNNTLVILNSVNDLSALDLRTKSTK- 159 (388)
T ss_dssp CTT-EEEEEE--ETTEEEEE-E--SSEEEEEESSSTTCEEEEEECSSCEEEEEECSSEEEEEETTSEEEEEETTTCCEE-
T ss_pred CCC-eeEEEE--CCCEEEEE-c--CCcEEEEEchhhhccCccceeecceeeEEecCCCEEEEECCCCEEEEEccCCccc-
Confidence 445 899999 88899886 4 89999999999887778888888888877 588889999 999999876532
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCe--EEEEE----------ecCceEEEEECCc
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSE--ICNYS----------FSNTILAVKLNRK 148 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~--i~~l~----------~~~~V~~v~~~~~ 148 (161)
. +. ..+.+++|||++.+++. .|+++++|+...+++ ..++. +...|.+|.|.++
T Consensus 160 ~----~~--~~Vs~v~WSpkG~~vg~--~dg~i~~~~~~~~~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 160 Q----LA--QNVTSFDVTNSQLAVLL--KDRSFQSFAWRNGEMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp E----EE--ESEEEEEECSSEEEEEE--TTSCEEEEEEETTEEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred c----cc--CCceEEEEcCCceEEEE--cCCcEEEEcCCCccccccceecCCcccccccCCCeeEEEEEEecC
Confidence 2 22 23778999999965544 578999999987775 55661 3457999999876
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.14 E-value=3.1e-10 Score=95.49 Aligned_cols=127 Identities=12% Similarity=0.057 Sum_probs=86.0
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccC-ccceeee-----eEEEecC---Cc-eEEEEeCC--
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD-SPLAALA-----SLSVGTK---SG-YRLFSLNS-- 82 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~-~~V~~l~-----~lasgs~---dg-iriwd~~~-- 82 (161)
..|.+++++|||+.||+++.. ||+++||++.+++. ..+..|. ..+.+++ ++++++. +. .+||.+..
T Consensus 22 ~~~~~~~~~~DG~~la~~s~~-~g~~~lw~~~~g~~-~~lt~~~~~~~~~~~~spd~~l~~~~~~~g~~~~~l~~~~~~~ 99 (582)
T 3o4h_A 22 VEKYSLQGVVDGDKLLVVGFS-EGSVNAYLYDGGET-VKLNREPINSVLDPHYGVGRVILVRDVSKGAEQHALFKVNTSR 99 (582)
T ss_dssp SCEEEEEEEETTTEEEEEEEE-TTEEEEEEEETTEE-EECCSSCCSEECEECTTCSEEEEEEECSTTSCCEEEEEEETTS
T ss_pred cchheeecCCCCCeEEEEEcc-CCceeEEEEcCCCc-EeeecccccccccccCCCCeEEEEeccCCCCcceEEEEEeccC
Confidence 358899999999999998764 89999999976655 4555554 5777766 5555554 33 78877654
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
......+...+ ...+.+++++++.+++++++.++. .|||++++++......+. .+++|+||
T Consensus 100 ~g~~~~l~~~~--~~~~~~~s~dg~~~~~~s~~~~~~-~l~d~~~g~~~~l~~~~~--~~~~~spD 160 (582)
T 3o4h_A 100 PGEEQRLEAVK--PMRILSGVDTGEAVVFTGATEDRV-ALYALDGGGLRELARLPG--FGFVSDIR 160 (582)
T ss_dssp TTCCEECTTSC--SBEEEEEEECSSCEEEEEECSSCE-EEEEEETTEEEEEEEESS--CEEEEEEE
T ss_pred CCccccccCCC--CceeeeeCCCCCeEEEEecCCCCc-eEEEccCCcEEEeecCCC--ceEEECCC
Confidence 22121222222 234556666677788888766654 499999997655555544 88999998
|
| >2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=3.5e-10 Score=96.87 Aligned_cols=134 Identities=7% Similarity=-0.008 Sum_probs=92.7
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCC-----
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNS----- 82 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~----- 82 (161)
.++.+++++|| ..++++. |++|++||+.+++.. .+..|...+.+++ .||++ .|+ |++||+.+
T Consensus 82 ~~v~~~~~spd-~~~~~~~---~~~i~~~d~~~~~~~-~l~~~~~~~~~~~~SpdG~~la~~-~~~~i~v~~~~~~~~~~ 155 (706)
T 2z3z_A 82 FPSFRTLDAGR-GLVVLFT---QGGLVGFDMLARKVT-YLFDTNEETASLDFSPVGDRVAYV-RNHNLYIARGGKLGEGM 155 (706)
T ss_dssp CCCEEEEETTT-TEEEEEE---TTEEEEEETTTTEEE-EEECCTTCCTTCEECTTSSEEEEE-ETTEEEEEECBCTTSCC
T ss_pred cCceeEEECCC-CeEEEEE---CCEEEEEECCCCceE-EccCCcccccCCcCCCCCCEEEEE-ECCeEEEEecCcccccC
Confidence 46889999999 5666543 799999999987654 4556677787777 77775 456 99999988
Q ss_pred cCceeeEEeecCcce------------EEEEEeecCCeEEEEecC---------------------------------CC
Q psy505 83 IDTLEQIYENSQEDV------------CIVERLFSSSLVAVVSLS---------------------------------SP 117 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~------------~v~~~~fs~~~~~~~s~~---------------------------------~d 117 (161)
++.. .+...+...+ .+..+.||||+..++.++ .+
T Consensus 156 g~~~-~~~~~~~~~~~~g~~~~~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~ 234 (706)
T 2z3z_A 156 SRAI-AVTIDGTETLVYGQAVHQREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHH 234 (706)
T ss_dssp CCCE-ESCSCCBTTEEESSCCGGGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCE
T ss_pred CCcE-EeccCCCCCeEcccchhhhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCe
Confidence 7654 2322222211 025778999887666553 44
Q ss_pred CeEEEEecCCCCeEEEEE---ecCceEEEEECCcE--EEEEec
Q psy505 118 RKLTVCHFKRGSEICNYS---FSNTILAVKLNRKK--EEEEDE 155 (161)
Q Consensus 118 ~~i~iWD~~~~~~i~~l~---~~~~V~~v~~~~~~--~vv~~~ 155 (161)
..|.+||+++++...... +...+.+++|+||+ +++...
T Consensus 235 ~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~ 277 (706)
T 2z3z_A 235 VTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPDENILYVAEV 277 (706)
T ss_dssp EEEEEEETTTTEEEECCCCSCTTCEEEEEEECTTSSEEEEEEE
T ss_pred eEEEEEECCCCceEeeccCCCCceeEeeEEEECCCCEEEEEEe
Confidence 679999999988654332 23579999999983 555433
|
| >3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A | Back alignment and structure |
|---|
Probab=99.12 E-value=3.7e-10 Score=95.01 Aligned_cols=122 Identities=10% Similarity=0.043 Sum_probs=84.9
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCC----c-eEEEEeCCcCc
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKS----G-YRLFSLNSIDT 85 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~d----g-iriwd~~~~~~ 85 (161)
+.++++++++..+++.. ++.+.|||+.++++......+. .+++ ++|+++.| + |++||+++|+.
T Consensus 114 ~~~~s~dg~~~~~~s~~---~~~~~l~d~~~g~~~~l~~~~~---~~~~~spDG~~la~~~~~~~~~~~i~~~d~~~g~~ 187 (582)
T 3o4h_A 114 ILSGVDTGEAVVFTGAT---EDRVALYALDGGGLRELARLPG---FGFVSDIRGDLIAGLGFFGGGRVSLFTSNLSSGGL 187 (582)
T ss_dssp EEEEEECSSCEEEEEEC---SSCEEEEEEETTEEEEEEEESS---CEEEEEEETTEEEEEEEEETTEEEEEEEETTTCCC
T ss_pred eeeeCCCCCeEEEEecC---CCCceEEEccCCcEEEeecCCC---ceEEECCCCCEEEEEEEcCCCCeEEEEEcCCCCCc
Confidence 44566555555555543 3445599999987655554433 4444 78877766 6 99999988864
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCC--eEEEEecCCCCeEEEEE-ecCceEEEE--------ECCcE
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPR--KLTVCHFKRGSEICNYS-FSNTILAVK--------LNRKK 149 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~--~i~iWD~~~~~~i~~l~-~~~~V~~v~--------~~~~~ 149 (161)
. .+.+|.. .+..++||||+..++++..++ .|.+||+.+++.. .+. +...|.++. |+||+
T Consensus 188 ~--~l~~~~~--~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~spdg 257 (582)
T 3o4h_A 188 R--VFDSGEG--SFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE-DLELPSKDFSSYRPTAITWLGYLPDG 257 (582)
T ss_dssp E--EECCSSC--EEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE-ECCCSCSHHHHHCCSEEEEEEECTTS
T ss_pred e--EeecCCC--ccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE-EccCCCcChhhhhhccccceeEcCCC
Confidence 3 3455543 467899999998888766666 8999999999876 443 445677777 99995
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.12 E-value=1e-10 Score=100.48 Aligned_cols=126 Identities=9% Similarity=0.061 Sum_probs=89.9
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCc---cceeee------eEEEecC---------Cc-eEEEE
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS---PLAALA------SLSVGTK---------SG-YRLFS 79 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~---~V~~l~------~lasgs~---------dg-iriwd 79 (161)
.++++|||.+++. +. ||+|++||+.++++...+.+|.. .+.+++ +||+++. ++ |++||
T Consensus 20 ~~~~s~dg~~~~~-~~--d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d 96 (719)
T 1z68_A 20 FPNWISGQEYLHQ-SA--DNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYD 96 (719)
T ss_dssp CCEESSSSEEEEE-CT--TSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEE
T ss_pred ccEECCCCeEEEE-cC--CCCEEEEEcCCCcEEEEEccccccccceeeEEECCCCCeEEEEecCceeEEeecceEEEEEE
Confidence 5567889976665 44 89999999999998877777654 377776 7877776 67 99999
Q ss_pred eCCcCce--eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe--cCce---------------
Q psy505 80 LNSIDTL--EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF--SNTI--------------- 140 (161)
Q Consensus 80 ~~~~~~~--~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~--~~~V--------------- 140 (161)
+.+++.+ ..+ . .. +..++||||+..++.. .++.|++||+.++++...... ...|
T Consensus 97 ~~~g~~~~~~~l-~---~~--~~~~~~SPDG~~la~~-~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~ 169 (719)
T 1z68_A 97 LSNGEFVRGNEL-P---RP--IQYLCWSPVGSKLAYV-YQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLA 169 (719)
T ss_dssp TTTTEECCSSCC-C---SS--BCCEEECSSTTCEEEE-ETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTC
T ss_pred CCCCccccceec-C---cc--cccceECCCCCEEEEE-ECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeeccc
Confidence 9887641 122 1 12 4567899998777765 367999999999887543211 2223
Q ss_pred --EEEEECCc--EEEEEe
Q psy505 141 --LAVKLNRK--KEEEED 154 (161)
Q Consensus 141 --~~v~~~~~--~~vv~~ 154 (161)
.++.|||| .|+...
T Consensus 170 ~~~~~~wSPDG~~la~~~ 187 (719)
T 1z68_A 170 TKYALWWSPNGKFLAYAE 187 (719)
T ss_dssp SSCCEEECTTSSEEEEEE
T ss_pred CcccEEECCCCCEEEEEE
Confidence 48999998 455554
|
| >1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A* | Back alignment and structure |
|---|
Probab=99.11 E-value=3.2e-10 Score=101.99 Aligned_cols=131 Identities=10% Similarity=0.046 Sum_probs=100.5
Q ss_pred eeEEeecC-CCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCc-cceeee-----eEEEecCCc-eE-EEEeCCcCce
Q psy505 16 GICCLCVN-SDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS-PLAALA-----SLSVGTKSG-YR-LFSLNSIDTL 86 (161)
Q Consensus 16 ~v~~~~~~-~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~-~V~~l~-----~lasgs~dg-ir-iwd~~~~~~~ 86 (161)
++.+++++ |||..+|+.+ ++.|.+||+.+++. ..+..|.. .+.+++ .|+++++++ +. +||+.+++..
T Consensus 297 ~v~~~~~S~pdG~~la~~~---~~~i~~~~~~~~~~-~~~~~~~~~~~~~~~~sdg~~l~~~s~~~~l~~~~d~~~~~~~ 372 (1045)
T 1k32_A 297 SKFAEDFSPLDGDLIAFVS---RGQAFIQDVSGTYV-LKVPEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE 372 (1045)
T ss_dssp GGGEEEEEECGGGCEEEEE---TTEEEEECTTSSBE-EECSCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE
T ss_pred ccceeeecCCCCCEEEEEE---cCEEEEEcCCCCce-EEccCCCcceEEeeeEcCCCeEEEEECCCceEEEEECCCCCce
Confidence 47788899 9999999865 68999999987764 34677777 666665 577777777 88 9999876532
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE-EecCceEEEEECCc--EEEEEe
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY-SFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l-~~~~~V~~v~~~~~--~~vv~~ 154 (161)
.+. +|.. .+..++|||++..+++++.++.|++||+++++....+ .+...|.+++|+|| .++...
T Consensus 373 -~l~-~~~~--~~~~~~~SpDG~~la~~~~~~~v~~~d~~tg~~~~~~~~~~~~v~~~~~SpDG~~la~~~ 439 (1045)
T 1k32_A 373 -KFE-ENLG--NVFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNSRFIAYGF 439 (1045)
T ss_dssp -ECC-CCCC--SEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTSCEEEEEE
T ss_pred -Eec-CCcc--ceeeeEECCCCCEEEEECCCCeEEEEECCCCceEEeccCCCCCccceEECCCCCeEEEEe
Confidence 333 5533 4678899999988887778889999999999987766 36778999999998 344443
|
| >3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum} | Back alignment and structure |
|---|
Probab=99.10 E-value=1.2e-08 Score=79.83 Aligned_cols=137 Identities=12% Similarity=0.038 Sum_probs=85.1
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcC-CCCce--eeeeccCc-cceeee-------eEEEecCCc-eEEEEeCC-
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDAD-NLHAK--TMIPAHDS-PLAALA-------SLSVGTKSG-YRLFSLNS- 82 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~-~~~~~--~~l~~H~~-~V~~l~-------~lasgs~dg-iriwd~~~- 82 (161)
.+..++++|||..+++ +.. ++.|++||+. +++.. ..+..+.+ ....++ +++++..++ +++|++..
T Consensus 142 ~~~~~~~spdg~l~v~-~~~-~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~ 219 (347)
T 3hfq_A 142 HIHYTDLTPDNRLAVI-DLG-SDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDTQ 219 (347)
T ss_dssp CEEEEEECTTSCEEEE-ETT-TTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEETT
T ss_pred CceEEEECCCCcEEEE-eCC-CCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 3667889999995444 443 8899999998 55432 22233222 445555 344456666 99999874
Q ss_pred -cCceeeEEe--ecCc----ceEEEEEeecCCeEEE-EecCCCCeEEEEecCC-C--CeEEEEEe-cCceEEEEECCc--
Q psy505 83 -IDTLEQIYE--NSQE----DVCIVERLFSSSLVAV-VSLSSPRKLTVCHFKR-G--SEICNYSF-SNTILAVKLNRK-- 148 (161)
Q Consensus 83 -~~~~~~~~~--~~~~----~~~v~~~~fs~~~~~~-~s~~~d~~i~iWD~~~-~--~~i~~l~~-~~~V~~v~~~~~-- 148 (161)
++ +..... .... ......++|+|++..+ ++...+++|.+||+.. + +.+..+.. ...+.+++|+|+
T Consensus 220 ~g~-~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~spdg~ 298 (347)
T 3hfq_A 220 TGA-FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTADGHLTLIQQISTEGDFPRDFDLDPTEA 298 (347)
T ss_dssp TTE-EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGGGCEEEEEEEECSSSCCCEEEECTTSS
T ss_pred CCc-eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCCCcEEEeEEEecCCCCcCeEEECCCCC
Confidence 43 211111 1111 1346789999998644 5655678999999973 2 33444443 456899999998
Q ss_pred EEEEEec
Q psy505 149 KEEEEDE 155 (161)
Q Consensus 149 ~~vv~~~ 155 (161)
.++++..
T Consensus 299 ~l~v~~~ 305 (347)
T 3hfq_A 299 FVVVVNQ 305 (347)
T ss_dssp EEEEEET
T ss_pred EEEEEEc
Confidence 3666543
|
| >1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.10 E-value=3.9e-11 Score=103.13 Aligned_cols=134 Identities=7% Similarity=0.025 Sum_probs=89.4
Q ss_pred eeEEeecCCCceEEEEcCCC-------CcceEEEEEcCCCCce--eeeeccCccceeee------eEEEecCCceEEEEe
Q psy505 16 GICCLCVNSDNCYLAYPGSN-------SIGEVQIFDADNLHAK--TMIPAHDSPLAALA------SLSVGTKSGYRLFSL 80 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~-------~dg~v~iWd~~~~~~~--~~l~~H~~~V~~l~------~lasgs~dgiriwd~ 80 (161)
++.+++++|||++||+++.. .|++|++||+.+++.+ ..+. ..+.+++ .||.++++.|++||+
T Consensus 61 ~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l~---~~~~~~~~SPDG~~la~~~~~~i~~~~~ 137 (719)
T 1z68_A 61 NASNYGLSPDRQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNELP---RPIQYLCWSPVGSKLAYVYQNNIYLKQR 137 (719)
T ss_dssp TCSEEEECTTSSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCCC---SSBCCEEECSSTTCEEEEETTEEEEESS
T ss_pred ceeeEEECCCCCeEEEEecCceeEEeecceEEEEEECCCCccccceecC---cccccceECCCCCEEEEEECCeEEEEeC
Confidence 36788899999999986531 1589999999998763 2332 4566666 788887544999999
Q ss_pred CCcCceeeEEeecCcceE---------------EEEEeecCCeEEEEecCCCC---------------------------
Q psy505 81 NSIDTLEQIYENSQEDVC---------------IVERLFSSSLVAVVSLSSPR--------------------------- 118 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~---------------v~~~~fs~~~~~~~s~~~d~--------------------------- 118 (161)
.+++.......++...+. ..+++||||+..++.++.|.
T Consensus 138 ~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~ 217 (719)
T 1z68_A 138 PGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAYAEFNDTDIPVIAYSYYGDEQYPRTINIPYPKA 217 (719)
T ss_dssp TTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEEEEEECTTSCEEEEEECCSSSSCEEEEEECCBT
T ss_pred CCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEEEEECCCCCceEEeeccCCCCCccceeecCCCC
Confidence 888754222223221110 13688999987776653331
Q ss_pred -------eEEEEecCCCCeE--EEEE-------ecCceEEEEECCcEEEE
Q psy505 119 -------KLTVCHFKRGSEI--CNYS-------FSNTILAVKLNRKKEEE 152 (161)
Q Consensus 119 -------~i~iWD~~~~~~i--~~l~-------~~~~V~~v~~~~~~~vv 152 (161)
+|++||+.+++.+ ..+. +...+.+++|+||+-++
T Consensus 218 g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~~~ 267 (719)
T 1z68_A 218 GAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDERVC 267 (719)
T ss_dssp TSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSEEE
T ss_pred CCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCeEE
Confidence 7999999988753 1221 34578999999995333
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.09 E-value=5.2e-09 Score=82.35 Aligned_cols=141 Identities=11% Similarity=0.021 Sum_probs=95.1
Q ss_pred eeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeeccC----------ccceeee-------eEEEecCCc-eE
Q psy505 16 GICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD----------SPLAALA-------SLSVGTKSG-YR 76 (161)
Q Consensus 16 ~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~----------~~V~~l~-------~lasgs~dg-ir 76 (161)
....++++| +|.++++.+.. ++.|++|| .+++.+..+.... ....+++ ++++.+.++ |+
T Consensus 144 ~P~~ia~~~~~g~lyv~d~~~-~~~I~~~~-~~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~ 221 (329)
T 3fvz_A 144 QPTDVAVEPSTGAVFVSDGYC-NSRIVQFS-PSGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQ 221 (329)
T ss_dssp SEEEEEECTTTCCEEEEECSS-CCEEEEEC-TTSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEE
T ss_pred CCcEEEEeCCCCeEEEEeCCC-CCeEEEEc-CCCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEE
Confidence 467888999 78888876422 78999999 5677777774322 2356666 566666777 99
Q ss_pred EEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEec-------CCCCeEEEEecCCCCeEEEEE----ecCceEEEEE
Q psy505 77 LFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL-------SSPRKLTVCHFKRGSEICNYS----FSNTILAVKL 145 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~-------~~d~~i~iWD~~~~~~i~~l~----~~~~V~~v~~ 145 (161)
+||..+|+.+. .+...........++|+| +.++++. ..+++|++||..+++.+..+. ....+.++++
T Consensus 222 ~~~~~~G~~~~-~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~g~~~~~~~~~~~~~~~p~~ia~ 299 (329)
T 3fvz_A 222 CFKTDTKEFVR-EIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSSGEIIDVFKPVRKHFDMPHDIVA 299 (329)
T ss_dssp EEETTTCCEEE-EECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTTCCEEEEECCSSSCCSSEEEEEE
T ss_pred EEECCCCcEEE-EEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCCCeEEEEEcCCCCccCCeeEEEE
Confidence 99998887553 333222112355788999 4444332 345589999999999988874 3457899999
Q ss_pred CCcEEEEEe---ccceee
Q psy505 146 NRKKEEEED---EEEEKK 160 (161)
Q Consensus 146 ~~~~~vv~~---~~~~~~ 160 (161)
+|++.+.|. .++|++
T Consensus 300 ~~dG~lyvad~~~~~I~~ 317 (329)
T 3fvz_A 300 SEDGTVYIGDAHTNTVWK 317 (329)
T ss_dssp CTTSEEEEEESSSCCEEE
T ss_pred CCCCCEEEEECCCCEEEE
Confidence 999544443 345554
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=99.02 E-value=4.7e-08 Score=74.58 Aligned_cols=133 Identities=11% Similarity=0.038 Sum_probs=91.3
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee--ccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP--AHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~--~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
.....++++|+|.++++... ++.|.+||.. ++.+..+. ++...+++++ ++++.+.++ |++||.. ++.
T Consensus 121 ~~~~~i~~~~~g~l~v~~~~--~~~i~~~~~~-g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~ 196 (286)
T 1q7f_A 121 QHPRGVTVDNKGRIIVVECK--VMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNYE-GQY 196 (286)
T ss_dssp SCEEEEEECTTSCEEEEETT--TTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEETT-CCE
T ss_pred CCceEEEEeCCCCEEEEECC--CCEEEEEcCC-CCEEEEeCCCCccCCcEEEEECCCCCEEEEECCCCEEEEEcCC-CCE
Confidence 35678888999987776554 7899999964 56666664 4445677777 566666666 9999974 443
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCC-eEEEEecCCCCeEEEEEec---CceEEEEECCc-EEEEE
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPR-KLTVCHFKRGSEICNYSFS---NTILAVKLNRK-KEEEE 153 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~-~i~iWD~~~~~~i~~l~~~---~~V~~v~~~~~-~~vv~ 153 (161)
+ ..+..+........+++++++..+++...++ .|.+||. +++.+..+... ..+.+++++|+ .+.+.
T Consensus 197 ~-~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~~~~i~~~~~g~l~vs 267 (286)
T 1q7f_A 197 L-RQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQ-DGQLISALESKVKHAQCFDVALMDDGSVVLA 267 (286)
T ss_dssp E-EEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECT-TSCEEEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred E-EEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECC-CCCEEEEEcccCCCCcceeEEECCCCcEEEE
Confidence 3 2333221112356788999888778776666 9999995 57777777542 34789999998 44444
|
| >3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A* | Back alignment and structure |
|---|
Probab=99.01 E-value=4.8e-08 Score=76.80 Aligned_cols=136 Identities=10% Similarity=0.019 Sum_probs=93.9
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC-ceeee---------eccCccceeee-------eEEEec-CCc-eE
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH-AKTMI---------PAHDSPLAALA-------SLSVGT-KSG-YR 76 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~-~~~~l---------~~H~~~V~~l~-------~lasgs-~dg-ir 76 (161)
....++++|+|.++++... ++.|++||..... .+..+ .++-...++++ ++++.+ .++ |+
T Consensus 92 ~p~gia~d~~g~l~v~d~~--~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~ 169 (329)
T 3fvz_A 92 LPHGLSIDTDGNYWVTDVA--LHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIV 169 (329)
T ss_dssp SEEEEEECTTSCEEEEETT--TTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEE
T ss_pred CceEEEECCCCCEEEEECC--CCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEE
Confidence 4667888999987777554 7899999986542 55565 34444566666 556665 466 99
Q ss_pred EEEeCCcCceeeEEeecCc-------c-eEEEEEeecCC-eEEEEecCCCCeEEEEecCCCCeEEEEE---ecCceEEEE
Q psy505 77 LFSLNSIDTLEQIYENSQE-------D-VCIVERLFSSS-LVAVVSLSSPRKLTVCHFKRGSEICNYS---FSNTILAVK 144 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~~-------~-~~v~~~~fs~~-~~~~~s~~~d~~i~iWD~~~~~~i~~l~---~~~~V~~v~ 144 (161)
+|| .+|..+. .+..... . .....++++|+ +...++...+++|++||..+|+.+..+. +...+.+++
T Consensus 170 ~~~-~~g~~~~-~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~ 247 (329)
T 3fvz_A 170 QFS-PSGKFVT-QWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVREIKHASFGRNVFAIS 247 (329)
T ss_dssp EEC-TTSCEEE-EECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEEECCTTTTTCEEEEE
T ss_pred EEc-CCCCEEE-EeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEEEeccccCCCcceee
Confidence 999 4565443 3321110 0 12457889997 7888887788899999999999988885 346789999
Q ss_pred ECCcEEEEEecc
Q psy505 145 LNRKKEEEEDEE 156 (161)
Q Consensus 145 ~~~~~~vv~~~~ 156 (161)
|+| +++++.+.
T Consensus 248 ~~p-g~~~~~~g 258 (329)
T 3fvz_A 248 YIP-GFLFAVNG 258 (329)
T ss_dssp EET-TEEEEEEC
T ss_pred ecC-CEEEEeCC
Confidence 999 44444443
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=99.00 E-value=3.7e-08 Score=78.33 Aligned_cols=133 Identities=12% Similarity=-0.022 Sum_probs=84.6
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcC-CCCceeeee--ccCccceeee--------eEEEec-------------C
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDAD-NLHAKTMIP--AHDSPLAALA--------SLSVGT-------------K 72 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~-~~~~~~~l~--~H~~~V~~l~--------~lasgs-------------~ 72 (161)
+..++++|||.+|++++. + .|.+||+. +++...... .+ +...+++ ++++++ .
T Consensus 42 ~~~~a~spdg~~l~~~~~--~-~v~~~~~~~~g~~~~~~~~~~~-g~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~ 117 (365)
T 1jof_A 42 ISWMTFDHERKNIYGAAM--K-KWSSFAVKSPTEIVHEASHPIG-GHPRANDADTNTRAIFLLAAKQPPYAVYANPFYKF 117 (365)
T ss_dssp CSEEEECTTSSEEEEEEB--T-EEEEEEEEETTEEEEEEEEECC-SSGGGGCTTSCCEEEEEEECSSTTCCEEEEEESSS
T ss_pred CcEEEECCCCCEEEEEcc--c-eEEEEEECCCCCEEEeeEeecC-CCCccEEECCCCCEEEEEEecCCcceeccceeecC
Confidence 456778999998877654 5 99999997 776654332 12 2244444 244553 5
Q ss_pred Cc-eEEEEeC-CcCceeeEEee--cCcceEEEEEeecCCeEE-EEecCCCCeEEEEecC-CCCeE--EEEEe---cCceE
Q psy505 73 SG-YRLFSLN-SIDTLEQIYEN--SQEDVCIVERLFSSSLVA-VVSLSSPRKLTVCHFK-RGSEI--CNYSF---SNTIL 141 (161)
Q Consensus 73 dg-iriwd~~-~~~~~~~~~~~--~~~~~~v~~~~fs~~~~~-~~s~~~d~~i~iWD~~-~~~~i--~~l~~---~~~V~ 141 (161)
+| +++|++. +|+.. ..... +.....+.+++|+|++.. .++...+++|++||+. +++.. ..+.. ...+.
T Consensus 118 ~g~v~v~~~~~~g~~~-~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~~g~~p~ 196 (365)
T 1jof_A 118 AGYGNVFSVSETGKLE-KNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGEVELVGSVDAPDPGDHPR 196 (365)
T ss_dssp CCEEEEEEECTTCCEE-EEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSCEEEEEEEECSSTTCCEE
T ss_pred CceEEEEccCCCCcCc-ceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCCEEEeeeEecCCCCCCCC
Confidence 77 9999997 45432 22221 111224678899998853 3444456799999998 77753 33432 35689
Q ss_pred EEEECCcE--EEEEe
Q psy505 142 AVKLNRKK--EEEED 154 (161)
Q Consensus 142 ~v~~~~~~--~vv~~ 154 (161)
.++|+|++ ++++.
T Consensus 197 ~~~~spdg~~l~v~~ 211 (365)
T 1jof_A 197 WVAMHPTGNYLYALM 211 (365)
T ss_dssp EEEECTTSSEEEEEE
T ss_pred EeEECCCCCEEEEEE
Confidence 99999983 55554
|
| >3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A | Back alignment and structure |
|---|
Probab=98.99 E-value=7.5e-09 Score=81.59 Aligned_cols=130 Identities=10% Similarity=0.041 Sum_probs=81.0
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc--eeeee---ccCccceeee------eE-EEecC-Cc-eEEEE
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA--KTMIP---AHDSPLAALA------SL-SVGTK-SG-YRLFS 79 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~--~~~l~---~H~~~V~~l~------~l-asgs~-dg-iriwd 79 (161)
..+...++++|||.++++++.. ++.|++||+.+++. +..+. .|.....+++ +| ++... ++ |++|+
T Consensus 210 ~~~~~~~~~spdg~~l~v~~~~-~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~ 288 (361)
T 3scy_A 210 GSGPRHLIFNSDGKFAYLINEI-GGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFK 288 (361)
T ss_dssp TCCEEEEEECTTSSEEEEEETT-TCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEE
T ss_pred CCCCeEEEEcCCCCEEEEEcCC-CCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEE
Confidence 3457789999999988776653 89999999997754 23332 3334455666 55 44444 46 99999
Q ss_pred eC--CcCceeeEEeecCcceEEEEEeecCCeEEEE-ecCCCCeEEEE--ecCCCCeEEEE-E-ecCceEEEEEC
Q psy505 80 LN--SIDTLEQIYENSQEDVCIVERLFSSSLVAVV-SLSSPRKLTVC--HFKRGSEICNY-S-FSNTILAVKLN 146 (161)
Q Consensus 80 ~~--~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~-s~~~d~~i~iW--D~~~~~~i~~l-~-~~~~V~~v~~~ 146 (161)
+. +|+ +..+..... ......++|+|++..++ ++..++.|.+| |.++|+..... . .-..+.+|+|.
T Consensus 289 ~~~~~g~-~~~~~~~~~-g~~~~~~~~spdg~~l~~~~~~~~~v~v~~~d~~~g~~~~~~~~~~~~~p~~v~~~ 360 (361)
T 3scy_A 289 VDETNGT-LTKVGYQLT-GIHPRNFIITPNGKYLLVACRDTNVIQIFERDQATGLLTDIKKDIKVDKPVCLKFV 360 (361)
T ss_dssp ECTTTCC-EEEEEEEEC-SSCCCEEEECTTSCEEEEEETTTTEEEEEEECTTTCCEEECSCCEECSSEEEEEEE
T ss_pred EcCCCCc-EEEeeEecC-CCCCceEEECCCCCEEEEEECCCCCEEEEEEECCCCcEeecceeeeCCCCeEEEEc
Confidence 95 444 212211111 11345789999886443 44467899995 66677754332 1 23567778774
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.95 E-value=3.8e-09 Score=91.74 Aligned_cols=106 Identities=12% Similarity=0.059 Sum_probs=79.8
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCcccee-----e--e----eEEEecCC---------c-e
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAA-----L--A----SLSVGTKS---------G-Y 75 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~-----l--~----~lasgs~d---------g-i 75 (161)
...++++|||.+++++ ||+|++||+.++++...+.+|...... + + +|+.++.+ + +
T Consensus 19 ~~~~~w~~dg~~~~~~----~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~~~~~ 94 (740)
T 4a5s_A 19 LYSLRWISDHEYLYKQ----ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASY 94 (740)
T ss_dssp CCCEEECSSSEEEEEE----TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEE
T ss_pred ccccEECCCCcEEEEc----CCcEEEEECCCCceEEEEechhhhhhcccccceEECCCCCEEEEEECCeeeEEEccceEE
Confidence 4467889999888873 799999999999998888988754332 2 3 77877775 4 6
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeE
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEI 131 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i 131 (161)
.+||+++++.. . +..+.+ .+...+||||+..++.. .++.|.+||+.+++..
T Consensus 95 ~~~d~~~~~~~-~-l~~~~~--~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~~~ 145 (740)
T 4a5s_A 95 DIYDLNKRQLI-T-EERIPN--NTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSY 145 (740)
T ss_dssp EEEETTTTEEC-C-SSCCCT--TEEEEEECSSTTCEEEE-ETTEEEEESSTTSCCE
T ss_pred EEEECCCCcEE-E-cccCCC--cceeeEECCCCCEEEEE-ECCeEEEEECCCCceE
Confidence 79999998633 2 333333 36688999998777766 4678999999988854
|
| >4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ... | Back alignment and structure |
|---|
Probab=98.93 E-value=4.2e-09 Score=91.50 Aligned_cols=127 Identities=6% Similarity=0.011 Sum_probs=86.2
Q ss_pred eecCCCceEEEEcCCCCc---------ceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCceEEEEeCCcC
Q psy505 20 LCVNSDNCYLAYPGSNSI---------GEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSGYRLFSLNSID 84 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~d---------g~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dgiriwd~~~~~ 84 (161)
++++|||++|++++. + |.+.+||+.++++. .+..|.+.+...+ .||.+++..|.+||+.+|+
T Consensus 67 ~~~Spdg~~l~~~~~--~~~~~r~~~~~~~~~~d~~~~~~~-~l~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~ 143 (740)
T 4a5s_A 67 YSISPDGQFILLEYN--YVKQWRHSYTASYDIYDLNKRQLI-TEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLP 143 (740)
T ss_dssp EEECTTSSEEEEEEE--EEECSSSCEEEEEEEEETTTTEEC-CSSCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSC
T ss_pred eEECCCCCEEEEEEC--CeeeEEEccceEEEEEECCCCcEE-EcccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCc
Confidence 677999999998664 4 66779999998764 5777878888777 7888866559999998877
Q ss_pred ceeeEEeecCcceE---------------EEEEeecCCeEEEEecCCC--------------------------------
Q psy505 85 TLEQIYENSQEDVC---------------IVERLFSSSLVAVVSLSSP-------------------------------- 117 (161)
Q Consensus 85 ~~~~~~~~~~~~~~---------------v~~~~fs~~~~~~~s~~~d-------------------------------- 117 (161)
.......++...+. ...+.||||+..++..+.|
T Consensus 144 ~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~ 223 (740)
T 4a5s_A 144 SYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLAYAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGA 223 (740)
T ss_dssp CEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEEEEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTS
T ss_pred eEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEEEEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcC
Confidence 54222223321110 0137899998766653111
Q ss_pred ----CeEEEEecCC---CC--eEEEEE-------ecCceEEEEECCcE
Q psy505 118 ----RKLTVCHFKR---GS--EICNYS-------FSNTILAVKLNRKK 149 (161)
Q Consensus 118 ----~~i~iWD~~~---~~--~i~~l~-------~~~~V~~v~~~~~~ 149 (161)
.+|+|||+.+ ++ ....+. +...+..++|+||+
T Consensus 224 ~~~~~~l~v~d~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~wspdg 271 (740)
T 4a5s_A 224 VNPTVKFFVVNTDSLSSVTNATSIQITAPASMLIGDHYLCDVTWATQE 271 (740)
T ss_dssp CCCEEEEEEEETTSCCSSSCCCEEEECCCHHHHTSCEEEEEEEEEETT
T ss_pred cCCeeEEEEEECCCCCCCCcceEEEecCCccCCCCCeEEEEEEEeCCC
Confidence 1689999998 73 223443 33468899999984
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.92 E-value=2.4e-07 Score=71.93 Aligned_cols=136 Identities=11% Similarity=-0.018 Sum_probs=90.8
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCC-----ceEEEEeCCcC
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKS-----GYRLFSLNSID 84 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~d-----giriwd~~~~~ 84 (161)
...+++++|+|.++++... ++.|.+||..+++....+..+...+.+++ +++++..+ +|.+||.+++.
T Consensus 46 ~~~~~~~~~~g~l~~~~~~--~~~i~~~d~~~~~~~~~~~~~~~~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~ 123 (333)
T 2dg1_A 46 QLEGLNFDRQGQLFLLDVF--EGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN 123 (333)
T ss_dssp CEEEEEECTTSCEEEEETT--TCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS
T ss_pred cccCcEECCCCCEEEEECC--CCEEEEEeCCCCcEEEEeeCCCCCcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCE
Confidence 4567788899987766444 78999999998877655556677788887 56666665 49999998765
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCC------CCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEe
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSS------PRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~------d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~ 154 (161)
.. .++........+..++++|++...++... .+.|..||..+++..........+.+++|+|+ .+.++.
T Consensus 124 ~~-~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~i~~~~dg~~l~v~~ 200 (333)
T 2dg1_A 124 LQ-DIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFRTVTPIIQNISVANGIALSTDEKVLWVTE 200 (333)
T ss_dssp CE-EEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSCCEEEEEEEESSEEEEEECTTSSEEEEEE
T ss_pred EE-EEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCCCEEEEeecCCCcccceEECCCCCEEEEEe
Confidence 32 23321111234678889998876666532 24577777766665433333456888999998 355554
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.91 E-value=1.3e-07 Score=74.51 Aligned_cols=148 Identities=9% Similarity=-0.082 Sum_probs=96.8
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccC-----ccceeee-----eEEEec
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD-----SPLAALA-----SLSVGT 71 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~-----~~V~~l~-----~lasgs 71 (161)
+++.++ ....+ ...++++|++...++... ++.|.+||+.+++....+.... .....++ ++++..
T Consensus 75 ~~~~~i-~~~~~---p~~i~~~~~g~lyv~~~~--~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~~~~~lyv~~~ 148 (328)
T 3dsm_A 75 KEVGRI-TGFTS---PRYIHFLSDEKAYVTQIW--DYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQYGKYVYVNCW 148 (328)
T ss_dssp CEEEEE-ECCSS---EEEEEEEETTEEEEEEBS--CSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEEETTEEEEEEC
T ss_pred EEEEEc-CCCCC---CcEEEEeCCCeEEEEECC--CCeEEEEECCCCeEEEEEEcCCccccCCCcceEEEECCEEEEEcC
Confidence 456666 33334 445566678866665433 7999999999998887776443 1334454 344443
Q ss_pred -CCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCC----------CeEEEEecCCCCeEEEEEec--
Q psy505 72 -KSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSP----------RKLTVCHFKRGSEICNYSFS-- 137 (161)
Q Consensus 72 -~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d----------~~i~iWD~~~~~~i~~l~~~-- 137 (161)
.++ |.+||+++++....+..+.. ...+.++|++...+++..+ +.|.++|.++++.+..+..+
T Consensus 149 ~~~~~v~viD~~t~~~~~~i~~g~~----p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t~~v~~~~~~~~g 224 (328)
T 3dsm_A 149 SYQNRILKIDTETDKVVDELTIGIQ----PTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAETFTVEKQFKFKLG 224 (328)
T ss_dssp TTCCEEEEEETTTTEEEEEEECSSC----BCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTTTEEEEEEECCTT
T ss_pred CCCCEEEEEECCCCeEEEEEEcCCC----ccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCCCeEEEEEecCCC
Confidence 355 99999998765433322221 2356789988777766444 78999999999987777653
Q ss_pred CceEEEEECCc-EEEEEecccee
Q psy505 138 NTILAVKLNRK-KEEEEDEEEEK 159 (161)
Q Consensus 138 ~~V~~v~~~~~-~~vv~~~~~~~ 159 (161)
.....++|+|+ +.+.+....|+
T Consensus 225 ~~p~~la~~~d~~~lyv~~~~v~ 247 (328)
T 3dsm_A 225 DWPSEVQLNGTRDTLYWINNDIW 247 (328)
T ss_dssp CCCEEEEECTTSCEEEEESSSEE
T ss_pred CCceeEEEecCCCEEEEEccEEE
Confidence 47899999985 44444443554
|
| >1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1 | Back alignment and structure |
|---|
Probab=98.88 E-value=1.5e-07 Score=71.71 Aligned_cols=140 Identities=11% Similarity=0.011 Sum_probs=91.6
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee------ccCccceeee-------eEEEec-CCc-eEEE
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP------AHDSPLAALA-------SLSVGT-KSG-YRLF 78 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~------~H~~~V~~l~-------~lasgs-~dg-iriw 78 (161)
.....+++++|+|.++++... ++.|++||.. ++.+..+. +|...+.+++ ++++.. .++ |++|
T Consensus 29 ~~~p~~v~~~~~g~l~v~~~~--~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i~~~ 105 (286)
T 1q7f_A 29 FTEPSGVAVNAQNDIIVADTN--NHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQIQIY 105 (286)
T ss_dssp BSCEEEEEECTTCCEEEEEGG--GTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEEEEE
T ss_pred cCCCceEEECCCCCEEEEECC--CCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEEEEE
Confidence 345778888999987776444 7999999987 66666664 2334556655 344443 255 9999
Q ss_pred EeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe---cCceEEEEECCc-EEEEEe
Q psy505 79 SLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF---SNTILAVKLNRK-KEEEED 154 (161)
Q Consensus 79 d~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~---~~~V~~v~~~~~-~~vv~~ 154 (161)
| .+++.+..+...+. .....++++|++...++...++.|.+||. .++.+..+.. ...+.+++++|+ .+.++.
T Consensus 106 d-~~g~~~~~~~~~~~--~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~ 181 (286)
T 1q7f_A 106 N-QYGQFVRKFGATIL--QHPRGVTVDNKGRIIVVECKVMRVIIFDQ-NGNVLHKFGCSKHLEFPNGVVVNDKQEIFISD 181 (286)
T ss_dssp C-TTSCEEEEECTTTC--SCEEEEEECTTSCEEEEETTTTEEEEECT-TSCEEEEEECTTTCSSEEEEEECSSSEEEEEE
T ss_pred C-CCCcEEEEecCccC--CCceEEEEeCCCCEEEEECCCCEEEEEcC-CCCEEEEeCCCCccCCcEEEEECCCCCEEEEE
Confidence 9 56664432211121 13567889998877777666789999996 4676666653 246899999997 444443
Q ss_pred --ccceee
Q psy505 155 --EEEEKK 160 (161)
Q Consensus 155 --~~~~~~ 160 (161)
.++|++
T Consensus 182 ~~~~~i~~ 189 (286)
T 1q7f_A 182 NRAHCVKV 189 (286)
T ss_dssp GGGTEEEE
T ss_pred CCCCEEEE
Confidence 335543
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.86 E-value=2.3e-08 Score=84.90 Aligned_cols=131 Identities=5% Similarity=-0.104 Sum_probs=87.3
Q ss_pred CceeEEeecCCCceEEEEcCCCCc----------ceEEEEEcCC------CCceeeee-ccCccceeee------eEEEe
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSI----------GEVQIFDADN------LHAKTMIP-AHDSPLAALA------SLSVG 70 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~d----------g~v~iWd~~~------~~~~~~l~-~H~~~V~~l~------~lasg 70 (161)
...+..++++|||+.|++++. | ..|++||+.+ ++. ..+. .|...+.+++ +||.+
T Consensus 129 ~~~~~~~~~spDg~~l~~~~~--~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~-~~l~~~~~~~~~~~~~SpDG~~la~~ 205 (662)
T 3azo_A 129 GLRWADPVLLPERGEVWCMAE--EFTGEGPSDVRRFLAAVPLDGSAAADRSAV-RELSDDAHRFVTGPRLSPDGRQAVWL 205 (662)
T ss_dssp CEEEEEEEEETTTTEEEEEEE--EECSSSTTCEEEEEEEEETTSTTTTCGGGS-EESSCSCSSEECCCEECTTSSEEEEE
T ss_pred CccccCcEECCCCCEEEEEEe--cccCCCCCCceeEEEEEECCCCccccCCce-eEEEecCCCcccCceECCCCCEEEEE
Confidence 345778899999999998764 5 5899999998 544 4555 5666676666 67655
Q ss_pred cCC--------c-eEEEEeC-CcC--ceeeEEeecCcceEEEEEeecCCeEEEEecCCCC--eEEEEecCCCCeEEEEEe
Q psy505 71 TKS--------G-YRLFSLN-SID--TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPR--KLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 71 s~d--------g-iriwd~~-~~~--~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~--~i~iWD~~~~~~i~~l~~ 136 (161)
+.+ . |++||+. +|. ....+..++.. .+..+.|+||+..+++++.++ .|.+||+.+++......+
T Consensus 206 ~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~--~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~~~~~~l~~~ 283 (662)
T 3azo_A 206 AWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEE--AIAQAEWAPDGSLIVATDRTGWWNLHRVDPATGAATQLCRR 283 (662)
T ss_dssp EECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTB--CEEEEEECTTSCEEEEECTTSSCEEEEECTTTCCEEESSCC
T ss_pred ECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCc--eEcceEECCCCeEEEEECCCCCeEEEEEECCCCceeecccc
Confidence 532 4 9999998 561 33345555433 366788999886555555556 677788877775433333
Q ss_pred cCc---------eEEEEECCcE
Q psy505 137 SNT---------ILAVKLNRKK 149 (161)
Q Consensus 137 ~~~---------V~~v~~~~~~ 149 (161)
... +..+.|+|++
T Consensus 284 ~~~~~~p~w~~~~~~~~~~~~~ 305 (662)
T 3azo_A 284 EEEFAGPLWTPGMRWFAPLANG 305 (662)
T ss_dssp SSBSSCCCCSTTCCSEEECTTS
T ss_pred cccccCccccccCceEeEeCCC
Confidence 221 5678888763
|
| >1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C* | Back alignment and structure |
|---|
Probab=98.79 E-value=1.2e-07 Score=77.55 Aligned_cols=128 Identities=5% Similarity=0.069 Sum_probs=89.1
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCC---------c-eeeeeccCccceeee----eEEEecCCc-eEEEEe
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH---------A-KTMIPAHDSPLAALA----SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~---------~-~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~ 80 (161)
.+..|++++...+++++|. + .+++|++.+.+ . ......+.+ |..|+ +|+++ .++ +++||+
T Consensus 39 ~~nlLais~~~gll~a~~~--~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~fd~~~L~v~-~~~~l~v~dv 113 (388)
T 1xip_A 39 SLQNLDISNSKSLFVAASG--S-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCFHGDQVLVS-TRNALYSLDL 113 (388)
T ss_dssp CCBCEEEETTTTEEEEEET--T-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEEETTEEEEE-ESSEEEEEES
T ss_pred cccEEEEcCCCCEEEEeCC--C-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEECCCEEEEE-cCCcEEEEEc
Confidence 4777788888778887665 4 56679876443 1 112234666 88888 77777 667 999999
Q ss_pred CCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEecc
Q psy505 81 NSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~~~ 156 (161)
++-... .....+..+ +.++.+.++.+++++ .|++|.+||+++++... ....|.+++|||+++++...+
T Consensus 114 ~sl~~~-~~~~~~~~~--v~~i~~~~p~~av~~--~dG~L~v~dl~~~~~~~---~~~~Vs~v~WSpkG~~vg~~d 181 (388)
T 1xip_A 114 EELSEF-RTVTSFEKP--VFQLKNVNNTLVILN--SVNDLSALDLRTKSTKQ---LAQNVTSFDVTNSQLAVLLKD 181 (388)
T ss_dssp SSTTCE-EEEEECSSC--EEEEEECSSEEEEEE--TTSEEEEEETTTCCEEE---EEESEEEEEECSSEEEEEETT
T ss_pred hhhhcc-Cccceeecc--eeeEEecCCCEEEEE--CCCCEEEEEccCCcccc---ccCCceEEEEcCCceEEEEcC
Confidence 775432 333444433 556667665555554 67899999999888643 457899999999998887775
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.77 E-value=3.6e-07 Score=73.12 Aligned_cols=138 Identities=10% Similarity=0.031 Sum_probs=80.0
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceee-eeccCc-cceee----eeEEEecCCc-eEEEEeCC-cCceee
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTM-IPAHDS-PLAAL----ASLSVGTKSG-YRLFSLNS-IDTLEQ 88 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~-l~~H~~-~V~~l----~~lasgs~dg-iriwd~~~-~~~~~~ 88 (161)
...++++|||++|.++....+++|.+||+.+++.+.+ +..... .+.-. ..+++.+.|| +.+|+.+. ++....
T Consensus 110 p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~~i~~~~~~~v~~~p~~~~~~~~~~~dg~~~~v~~~~~g~~~~~ 189 (361)
T 2oiz_A 110 DGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVEDVTAAAGCWSVIPQPNRPRSFMTICGDGGLLTINLGEDGKVASQ 189 (361)
T ss_dssp GGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEEEGGGTTEEEEEECTTSSSEEEEEETTSSEEEEEECTTSSEEEE
T ss_pred cceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEEEecCCCcceeEEcCCCCeeEEEECCCCcEEEEEECCCCcEeee
Confidence 3456778999988776531158999999999988877 543211 00000 1344555666 66666643 221100
Q ss_pred -------------------------EEeecCcceEEE-------------------------------EEeecCC-eEEE
Q psy505 89 -------------------------IYENSQEDVCIV-------------------------------ERLFSSS-LVAV 111 (161)
Q Consensus 89 -------------------------~~~~~~~~~~v~-------------------------------~~~fs~~-~~~~ 111 (161)
.+..+.+.+.+. .++|+|+ ..+.
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~~a~~~dg~~ly 269 (361)
T 2oiz_A 190 SRSKQMFSVKDDPIFIAPALDKDKAHFVSYYGNVYSADFSGDEVKVDGPWSLLNDEDKAKNWVPGGYNLVGLHRASGRMY 269 (361)
T ss_dssp EECCCCSCTTTSCBCSCCEECSSEEEEEBTTSEEEEEECSSSSCEEEEEEESCCHHHHHTTCEECCSSCEEEETTTTEEE
T ss_pred ccccceEcCCCCceEEEecccCCEEEEEeCCCeEEEEEecCCCceecccccccCccccccccccCCeeEEEEecCCCeEE
Confidence 000000011111 1567765 3333
Q ss_pred EecC----------CCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEec
Q psy505 112 VSLS----------SPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEEDE 155 (161)
Q Consensus 112 ~s~~----------~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~~ 155 (161)
+... ..++|.+||+++++.+.++.-.. +.+++|+|+ ++++.-.
T Consensus 270 v~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i~~~~-p~~ia~spdg~~l~v~n~ 324 (361)
T 2oiz_A 270 VFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARIPGRD-ALSMTIDQQRNLMLTLDG 324 (361)
T ss_dssp EEEESSCCTTCTTCCCSEEEEEETTTTEEEEEEECTT-CCEEEEETTTTEEEEECS
T ss_pred EEEccCCCcccccCCCceEEEEECCCCcEEEEEecCC-eeEEEECCCCCEEEEeCC
Confidence 3321 13589999999999999988666 999999997 4554443
|
| >3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp} | Back alignment and structure |
|---|
Probab=98.77 E-value=1.4e-07 Score=74.48 Aligned_cols=129 Identities=7% Similarity=-0.066 Sum_probs=84.4
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------eEEE---------------------
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------SLSV--------------------- 69 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------~las--------------------- 69 (161)
..+++|||..|++.+. ++.|++||+.+++....+..+...+.... +++.
T Consensus 85 ~~~~spdg~~l~~~~~--~~~l~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~ 162 (388)
T 3pe7_A 85 GGFLSPDDDALFYVKD--GRNLMRVDLATLEENVVYQVPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFY 162 (388)
T ss_dssp SCEECTTSSEEEEEET--TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHG
T ss_pred ceEEcCCCCEEEEEeC--CCeEEEEECCCCcceeeeechhhcccccceeECCCCCeeccccccCcccccccccchhhhhh
Confidence 4567899999999775 78999999999988777766665443222 2321
Q ss_pred -ecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCC------CCeEEEEecCCCCeEEEEEec--C
Q psy505 70 -GTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSS------PRKLTVCHFKRGSEICNYSFS--N 138 (161)
Q Consensus 70 -gs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~------d~~i~iWD~~~~~~i~~l~~~--~ 138 (161)
...++ +.+||+.+|+.. .+.. +.. .+..+.|+| ++..++.... ...|.+||...++........ .
T Consensus 163 ~~~~~~~l~~~d~~~g~~~-~l~~-~~~--~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~ 238 (388)
T 3pe7_A 163 FTKPCCRLMRVDLKTGEST-VILQ-ENQ--WLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGTNMRKVKTHAEGE 238 (388)
T ss_dssp GGCCCEEEEEEETTTCCEE-EEEE-ESS--CEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSCCCEESCCCCTTE
T ss_pred ccCCcceEEEEECCCCceE-Eeec-CCc--cccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCCceEEeeeCCCCc
Confidence 22345 999999988643 3433 322 356788999 8876554322 336888888766543222333 3
Q ss_pred ceEEEEECCcE--EEEE
Q psy505 139 TILAVKLNRKK--EEEE 153 (161)
Q Consensus 139 ~V~~v~~~~~~--~vv~ 153 (161)
.+...+|+||+ ++.+
T Consensus 239 ~~~~~~~spdg~~l~~~ 255 (388)
T 3pe7_A 239 SCTHEFWVPDGSALVYV 255 (388)
T ss_dssp EEEEEEECTTSSCEEEE
T ss_pred ccccceECCCCCEEEEE
Confidence 58889999983 5443
|
| >1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1 | Back alignment and structure |
|---|
Probab=98.77 E-value=7.6e-07 Score=70.66 Aligned_cols=134 Identities=5% Similarity=-0.038 Sum_probs=82.5
Q ss_pred EEeecCCCceE--EEEcC-------C-----CCcceEEEEEcC-CCCceeeeec----cCccceeee------eEEEec-
Q psy505 18 CCLCVNSDNCY--LAYPG-------S-----NSIGEVQIFDAD-NLHAKTMIPA----HDSPLAALA------SLSVGT- 71 (161)
Q Consensus 18 ~~~~~~~d~~~--la~~g-------~-----~~dg~v~iWd~~-~~~~~~~l~~----H~~~V~~l~------~lasgs- 71 (161)
+.++++|||.. ++++. . . +|++++|++. +++....++. +...+.+++ +++++.
T Consensus 86 ~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~-~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~ 164 (365)
T 1jof_A 86 RANDADTNTRAIFLLAAKQPPYAVYANPFYKF-AGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADL 164 (365)
T ss_dssp GGGCTTSCCEEEEEEECSSTTCCEEEEEESSS-CCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEET
T ss_pred ccEEECCCCCEEEEEEecCCcceeccceeecC-CceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcC
Confidence 35788999984 44432 1 3 8999999997 4665544442 455677776 555544
Q ss_pred CCc-eEEEEeC-CcCceeeE--EeecCcceEEEEEeecCCeEEE-EecCCCCeEEEEecC--CCCeE---EEEE-ec---
Q psy505 72 KSG-YRLFSLN-SIDTLEQI--YENSQEDVCIVERLFSSSLVAV-VSLSSPRKLTVCHFK--RGSEI---CNYS-FS--- 137 (161)
Q Consensus 72 ~dg-iriwd~~-~~~~~~~~--~~~~~~~~~v~~~~fs~~~~~~-~s~~~d~~i~iWD~~--~~~~i---~~l~-~~--- 137 (161)
.++ |++||+. +|+.. .. +....+......++|+|++..+ ++...+++|.+|+.. +|+.. ..+. .+
T Consensus 165 ~~~~v~~~~~~~~g~~~-~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~ 243 (365)
T 1jof_A 165 TANKLWTHRKLASGEVE-LVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGI 243 (365)
T ss_dssp TTTEEEEEEECTTSCEE-EEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTC
T ss_pred CCCEEEEEEECCCCCEE-EeeeEecCCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCc
Confidence 345 9999998 66532 22 2211101235678999988433 444456799999764 57653 2232 11
Q ss_pred ---C-------ceEEEE-ECCcE--EEEE
Q psy505 138 ---N-------TILAVK-LNRKK--EEEE 153 (161)
Q Consensus 138 ---~-------~V~~v~-~~~~~--~vv~ 153 (161)
. .+.+++ |+||+ +++.
T Consensus 244 ~g~~~~~~~~~~~~~i~~~spdG~~l~v~ 272 (365)
T 1jof_A 244 PDRDPETGKGLYRADVCALTFSGKYMFAS 272 (365)
T ss_dssp CCBCTTTSSBSEEEEEEEECTTSSEEEEE
T ss_pred CCcccccccccccccEEEECCCCCEEEEE
Confidence 1 588999 99983 4443
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.71 E-value=1.3e-07 Score=74.46 Aligned_cols=137 Identities=9% Similarity=-0.022 Sum_probs=86.1
Q ss_pred eEEeecCCCceEEEEcCCC-CcceEEEEEcCCCCceeeeeccCccceee--e----eEEEecCCc-eEEEEeCCcCceee
Q psy505 17 ICCLCVNSDNCYLAYPGSN-SIGEVQIFDADNLHAKTMIPAHDSPLAAL--A----SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~-~dg~v~iWd~~~~~~~~~l~~H~~~V~~l--~----~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
+..++++|||.+|++.... .+..|.+||+.+++......++......+ + .|+.++.++ +.+||+.+++.. .
T Consensus 38 ~~~~~~SpdG~~l~~~~~~~g~~~l~~~d~~~~~~~~l~~~~~~~~~~~~~spdg~~l~~~~~~~~l~~~d~~~~~~~-~ 116 (396)
T 3c5m_A 38 FYQKCFTQDGKKLLFAGDFDGNRNYYLLNLETQQAVQLTEGKGDNTFGGFISTDERAFFYVKNELNLMKVDLETLEEQ-V 116 (396)
T ss_dssp TTSCCBCTTSCEEEEEECTTSSCEEEEEETTTTEEEECCCSSCBCTTTCEECTTSSEEEEEETTTEEEEEETTTCCEE-E
T ss_pred eecCcCCCCCCEEEEEEecCCCceEEEEECCCCcEEEeecCCCCccccceECCCCCEEEEEEcCCcEEEEECCCCCcE-E
Confidence 4456789999998886542 02468889999887644444433323223 2 788888887 999999887643 4
Q ss_pred EEeecCcceEE-EE----------------EeecCCeEEEEec-----CCCCeEEEEecCCCCeEEEEEecCceEEEEEC
Q psy505 89 IYENSQEDVCI-VE----------------RLFSSSLVAVVSL-----SSPRKLTVCHFKRGSEICNYSFSNTILAVKLN 146 (161)
Q Consensus 89 ~~~~~~~~~~v-~~----------------~~fs~~~~~~~s~-----~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~ 146 (161)
+...+...... .. ..++|++..++.. ..+..|.+||+.+++..........+..+.|+
T Consensus 117 ~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~~~~~~~l~~~d~~~g~~~~~~~~~~~~~~~~~s 196 (396)
T 3c5m_A 117 IYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYHTNPTCRLIKVDIETGELEVIHQDTAWLGHPIYR 196 (396)
T ss_dssp EEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHHTCCCEEEEEEETTTCCEEEEEEESSCEEEEEEE
T ss_pred EEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeeccCCCcceEEEEECCCCcEEeeccCCcccccceEC
Confidence 54444321110 11 2345554433221 34568999999999876555667789999999
Q ss_pred C-c--EEEEEe
Q psy505 147 R-K--KEEEED 154 (161)
Q Consensus 147 ~-~--~~vv~~ 154 (161)
| + +++.+.
T Consensus 197 p~dg~~l~~~~ 207 (396)
T 3c5m_A 197 PFDDSTVGFCH 207 (396)
T ss_dssp TTEEEEEEEEE
T ss_pred CCCCCEEEEEe
Confidence 9 5 355544
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.66 E-value=4.5e-07 Score=78.15 Aligned_cols=136 Identities=9% Similarity=-0.039 Sum_probs=82.1
Q ss_pred ceeEEeecCCCceEEEEcCCC---CcceEEEEEcCCCCce-e-eeeccCccceeee------eEEEecCCc---------
Q psy505 15 NGICCLCVNSDNCYLAYPGSN---SIGEVQIFDADNLHAK-T-MIPAHDSPLAALA------SLSVGTKSG--------- 74 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~---~dg~v~iWd~~~~~~~-~-~l~~H~~~V~~l~------~lasgs~dg--------- 74 (161)
..+.+++++|||++||++.+. .+.+|++||+.+++.+ . .+.... ..+++ .|+.++.|.
T Consensus 121 ~~~~~~~~SPDG~~la~~~~~~G~~~~~i~v~dl~tg~~~~~~~~~~~~--~~~~~wspDg~~l~~~~~d~~~~~~~~~~ 198 (695)
T 2bkl_A 121 VSLGTWAVSWDGKKVAFAQKPNAADEAVLHVIDVDSGEWSKVDVIEGGK--YATPKWTPDSKGFYYEWLPTDPSIKVDER 198 (695)
T ss_dssp EEEEEEEECTTSSEEEEEEEETTCSCCEEEEEETTTCCBCSSCCBSCCT--TCCCEECTTSSEEEEEECCCCTTSCGGGG
T ss_pred EEEEEEEECCCCCEEEEEECCCCCceEEEEEEECCCCCCcCCcccCccc--ccceEEecCCCEEEEEEecCCCCCccccC
Confidence 357788999999999964221 1568999999999865 2 122211 13444 566555431
Q ss_pred -----eEEEEeCCcCce-eeEEeecCcceEEEEEeecCCeEEEEecCCCC----eEEEEecCCCCeEEEEEecCceEEEE
Q psy505 75 -----YRLFSLNSIDTL-EQIYENSQEDVCIVERLFSSSLVAVVSLSSPR----KLTVCHFKRGSEICNYSFSNTILAVK 144 (161)
Q Consensus 75 -----iriwd~~~~~~~-~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~----~i~iWD~~~~~~i~~l~~~~~V~~v~ 144 (161)
|++|++.++... ..+++...+...+....|||++..++..+.++ .|.+||..+++..........+....
T Consensus 199 ~~~~~v~~~~l~t~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~~~~~~~~~~~ 278 (695)
T 2bkl_A 199 PGYTTIRYHTLGTEPSKDTVVHERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLVKGVGAKYEVH 278 (695)
T ss_dssp GGGCEEEEEETTSCGGGCEEEECCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEEECSSCCEEEE
T ss_pred CCCCEEEEEECCCCchhceEEEecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEeecCCCceEEEE
Confidence 999999876521 13444433223466888999886555433333 68888876666443334445555555
Q ss_pred ECCcEEEE
Q psy505 145 LNRKKEEE 152 (161)
Q Consensus 145 ~~~~~~vv 152 (161)
++++.+++
T Consensus 279 ~~~g~l~~ 286 (695)
T 2bkl_A 279 AWKDRFYV 286 (695)
T ss_dssp EETTEEEE
T ss_pred ecCCcEEE
Confidence 65555333
|
| >3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A | Back alignment and structure |
|---|
Probab=98.66 E-value=1.3e-07 Score=80.32 Aligned_cols=126 Identities=9% Similarity=0.019 Sum_probs=82.2
Q ss_pred eecCCCceE-EEEcCCCCcceEEEEEcC--CCCceeeeec-----cCccceeee------eEEEecCC----------c-
Q psy505 20 LCVNSDNCY-LAYPGSNSIGEVQIFDAD--NLHAKTMIPA-----HDSPLAALA------SLSVGTKS----------G- 74 (161)
Q Consensus 20 ~~~~~d~~~-la~~g~~~dg~v~iWd~~--~~~~~~~l~~-----H~~~V~~l~------~lasgs~d----------g- 74 (161)
++.+|||.. |++++.. ++.|.+||+. +......+.. |...+.+++ .|++++.| .
T Consensus 84 ~~~SPDg~~~la~~~~~-~~~l~~~~~~~~g~~~~~~l~~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~ 162 (662)
T 3azo_A 84 GVPRPAGGPLLVFTHFG-DQRLYAFEPDAPGGAVPRPLTPVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRF 162 (662)
T ss_dssp EECCSSSSCEEEEEBTT-TCCEEEECTTSTTCCCCEECSCCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEE
T ss_pred eeeecCCCeEEEEEECC-CCeEEEEcCCCCCCCCCEeccCCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeE
Confidence 443589998 8887653 5667777765 2033456665 666777776 77777765 4
Q ss_pred eEEEEeCC------cCceeeEEeecCcceEEEEEeecCCeEEEEecCCC--------CeEEEEecC-CC---CeEEEEEe
Q psy505 75 YRLFSLNS------IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSP--------RKLTVCHFK-RG---SEICNYSF 136 (161)
Q Consensus 75 iriwd~~~------~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d--------~~i~iWD~~-~~---~~i~~l~~ 136 (161)
|++||+.+ ++. ..+...+. ..+..++||||+..++..+.+ ..|.+||+. ++ +.......
T Consensus 163 i~~~~~~~~~~~~~~~~-~~l~~~~~--~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~ 239 (662)
T 3azo_A 163 LAAVPLDGSAAADRSAV-RELSDDAH--RFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGG 239 (662)
T ss_dssp EEEEETTSTTTTCGGGS-EESSCSCS--SEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEE
T ss_pred EEEEECCCCccccCCce-eEEEecCC--CcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCC
Confidence 99999987 543 23330222 246678899998665543222 479999999 57 33333333
Q ss_pred -cCceEEEEECCcE
Q psy505 137 -SNTILAVKLNRKK 149 (161)
Q Consensus 137 -~~~V~~v~~~~~~ 149 (161)
...+..+.|+||+
T Consensus 240 ~~~~~~~~~~spdg 253 (662)
T 3azo_A 240 PEEAIAQAEWAPDG 253 (662)
T ss_dssp TTBCEEEEEECTTS
T ss_pred CCceEcceEECCCC
Confidence 5789999999984
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.60 E-value=1.3e-06 Score=66.93 Aligned_cols=139 Identities=12% Similarity=-0.031 Sum_probs=88.5
Q ss_pred eEEeecCCCceEEEEcCC-------------CCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eE
Q psy505 17 ICCLCVNSDNCYLAYPGS-------------NSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YR 76 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~-------------~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-ir 76 (161)
+..++++|+|.++++... ...+.-+||.+.....+..+..+....++++ .+++.+.++ |+
T Consensus 117 ~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~ 196 (296)
T 3e5z_A 117 PNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPIRDRVKPNGLAFLPSGNLLVSDTGDNATH 196 (296)
T ss_dssp CCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEECCCSSEEEEEECTTSCEEEEETTTTEEE
T ss_pred CCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEeecCCCCCccEEECCCCCEEEEeCCCCeEE
Confidence 446778899988886221 0001124554443333455566666667777 457777777 99
Q ss_pred EEEeC-CcCc-e-eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEE-CCc--EE
Q psy505 77 LFSLN-SIDT-L-EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKL-NRK--KE 150 (161)
Q Consensus 77 iwd~~-~~~~-~-~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~-~~~--~~ 150 (161)
+||+. +|.. . ...+..+.. ....+++++++...++. ++.|.+||.. ++.+..+..+..+.++.| +|+ .|
T Consensus 197 ~~~~~~~g~~~~~~~~~~~~~~--~p~~i~~d~~G~l~v~~--~~~v~~~~~~-g~~~~~~~~~~~~~~~~f~~~d~~~L 271 (296)
T 3e5z_A 197 RYCLNARGETEYQGVHFTVEPG--KTDGLRVDAGGLIWASA--GDGVHVLTPD-GDELGRVLTPQTTSNLCFGGPEGRTL 271 (296)
T ss_dssp EEEECSSSCEEEEEEEECCSSS--CCCSEEEBTTSCEEEEE--TTEEEEECTT-SCEEEEEECSSCCCEEEEESTTSCEE
T ss_pred EEEECCCCcCcCCCeEeeCCCC--CCCeEEECCCCCEEEEc--CCeEEEECCC-CCEEEEEECCCCceeEEEECCCCCEE
Confidence 99996 4442 0 123322221 23467889888766665 5789999987 888888875544999999 576 68
Q ss_pred EEEeccceee
Q psy505 151 EEEDEEEEKK 160 (161)
Q Consensus 151 vv~~~~~~~~ 160 (161)
.+...+.+.+
T Consensus 272 ~v~t~~~l~~ 281 (296)
T 3e5z_A 272 YMTVSTEFWS 281 (296)
T ss_dssp EEEETTEEEE
T ss_pred EEEcCCeEEE
Confidence 8887776654
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.56 E-value=1.4e-06 Score=67.70 Aligned_cols=125 Identities=10% Similarity=0.036 Sum_probs=81.5
Q ss_pred ceeEEeecCCCceEEEEcC--------CCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCC---c---
Q psy505 15 NGICCLCVNSDNCYLAYPG--------SNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKS---G--- 74 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g--------~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~d---g--- 74 (161)
..+...++ ||..+|+.. .. ++.|.+||+.+++.. .+ ..+.+++ .||.++.+ +
T Consensus 15 ~~~~~~~~--dG~~i~~~~~~~~~~~~~~-~~~l~~~d~~~~~~~-~l----~~~~~~~~SpDg~~la~~~~~~~~~~~~ 86 (347)
T 2gop_A 15 AYLSDPRT--KGELVAYVLTKANLKDNKY-ENTIVIENLKNNARR-FI----ENATMPRISPDGKKIAFMRANEEKKVSE 86 (347)
T ss_dssp CEEEEEEE--ETTEEEEEEEEEETTTTEE-EEEEEEEETTTCCEE-EE----ESCEEEEECTTSSEEEEEEEETTTTEEE
T ss_pred EEcccceE--CCcEEEEEEeecCcccCCc-cceEEEEeCCCCceE-Ec----ccCCCeEECCCCCEEEEEEeccCCCcce
Confidence 34556666 888888742 21 678999999988753 34 3344444 56655542 3
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCC---------------------------CCeEEEEecCC
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSS---------------------------PRKLTVCHFKR 127 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~---------------------------d~~i~iWD~~~ 127 (161)
+.+||+.+++.. .+...+ . +..+.|+|++..++..+. ...|.+||+.+
T Consensus 87 l~~~~~~~g~~~-~l~~~~--~--~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~ 161 (347)
T 2gop_A 87 IWVADLETLSSK-KILEAK--N--IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTES 161 (347)
T ss_dssp EEEEETTTTEEE-EEEEES--E--EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEETTT
T ss_pred EEEEECCCCceE-EEEcCC--C--ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCC
Confidence 777888776533 343332 2 678899998754443321 25799999999
Q ss_pred CCeEEEEEecCceEEEEECCcEEEEE
Q psy505 128 GSEICNYSFSNTILAVKLNRKKEEEE 153 (161)
Q Consensus 128 ~~~i~~l~~~~~V~~v~~~~~~~vv~ 153 (161)
++.+..+..+ .+..+.|+|++++++
T Consensus 162 ~~~~~~l~~~-~~~~~~~spdg~~~~ 186 (347)
T 2gop_A 162 EEVIEEFEKP-RFSSGIWHRDKIVVN 186 (347)
T ss_dssp TEEEEEEEEE-TTCEEEEETTEEEEE
T ss_pred CeEEeeecCC-CcccccCCCCeEEEE
Confidence 8875555554 888999999994443
|
| >2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A | Back alignment and structure |
|---|
Probab=98.56 E-value=4.3e-07 Score=70.50 Aligned_cols=126 Identities=9% Similarity=-0.063 Sum_probs=89.2
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
+.+++++|++..++..+. ++.++.| .++....+.++...+.+++ ++++++.++ |.+||.++++.. .+
T Consensus 8 ~~~~~~~~~~~~~~~~~~--~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~i~~~d~~~~~~~-~~ 81 (333)
T 2dg1_A 8 LPTLFYSGKSNSAVPIIS--ESELQTI---TAEPWLEISKKGLQLEGLNFDRQGQLFLLDVFEGNIFKINPETKEIK-RP 81 (333)
T ss_dssp CCBCCSCGGGGCSSCCCC--GGGSCEE---ECEEEEEEESSCCCEEEEEECTTSCEEEEETTTCEEEEECTTTCCEE-EE
T ss_pred cceeeecCCccceeEEee--cccCccc---ccceeEEEeccCccccCcEECCCCCEEEEECCCCEEEEEeCCCCcEE-EE
Confidence 667888888877665444 8999999 3566677777777777777 666788887 999999887532 33
Q ss_pred EeecCcceEEEEEeecCCeEEEEecCCC----CeEEEEecCCCCeEEEEE---ecCceEEEEECCcEE
Q psy505 90 YENSQEDVCIVERLFSSSLVAVVSLSSP----RKLTVCHFKRGSEICNYS---FSNTILAVKLNRKKE 150 (161)
Q Consensus 90 ~~~~~~~~~v~~~~fs~~~~~~~s~~~d----~~i~iWD~~~~~~i~~l~---~~~~V~~v~~~~~~~ 150 (161)
...+.. .+..++++|++..+++...+ +.|.+||.++++....+. ....+.++.++|++.
T Consensus 82 ~~~~~~--~~~~i~~~~dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~ 147 (333)
T 2dg1_A 82 FVSHKA--NPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGG 147 (333)
T ss_dssp EECSSS--SEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSC
T ss_pred eeCCCC--CcceEEECCCCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCC
Confidence 323322 36788899988766665554 689999999887643332 235688999998843
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=9e-07 Score=76.38 Aligned_cols=110 Identities=14% Similarity=0.112 Sum_probs=71.8
Q ss_pred eeEEeecCCCceEEEEcCCCCcc----eEEEEEcCCCCceeeeeccCccceeee------eEEEecCC-c----------
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIG----EVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKS-G---------- 74 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg----~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~d-g---------- 74 (161)
.+..++++|||++||++.+. +| +|++||+.+++.+.....+. .+.+++ .|+.++.+ +
T Consensus 126 ~~~~~~~SPDg~~la~~~~~-~G~~~~~i~v~d~~tg~~~~~~~~~~-~~~~~~wspDg~~l~~~~~~~~~~~~~~~~~~ 203 (710)
T 2xdw_A 126 ALRGYAFSEDGEYFAYGLSA-SGSDWVTIKFMKVDGAKELPDVLERV-KFSCMAWTHDGKGMFYNAYPQQDGKSDGTETS 203 (710)
T ss_dssp EEEEEEECTTSSEEEEEEEE-TTCSCEEEEEEETTTTEEEEEEEEEE-CSCCEEECTTSSEEEEEECCCCSSCCSSSCCC
T ss_pred EEEEEEECCCCCEEEEEEcC-CCCceEEEEEEECCCCCCCcccccCc-ccceEEEEeCCCEEEEEEECCccccccccccc
Confidence 46788899999999987542 23 89999999998765432222 245555 55555443 2
Q ss_pred ------eEEEEeCCcCce-eeEEeecCcceEEEEEeecCCeEEEEecCC-----CCeEEEEecCC
Q psy505 75 ------YRLFSLNSIDTL-EQIYENSQEDVCIVERLFSSSLVAVVSLSS-----PRKLTVCHFKR 127 (161)
Q Consensus 75 ------iriwd~~~~~~~-~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~-----d~~i~iWD~~~ 127 (161)
|++|++.++... ..++++..+......+.|||++..++..+. ++.|.+||+.+
T Consensus 204 ~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~ 268 (710)
T 2xdw_A 204 TNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQ 268 (710)
T ss_dssp CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGG
T ss_pred cCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcc
Confidence 899999876521 123444322334567889998865553321 57899999986
|
| >3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis} | Back alignment and structure |
|---|
Probab=98.55 E-value=7.5e-06 Score=64.33 Aligned_cols=133 Identities=4% Similarity=-0.025 Sum_probs=84.3
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEE
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIY 90 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~ 90 (161)
..++++.+..+++. .. ++.|.+||..+++.+.++... .....++ ++++...++ |.+||.++++....+-
T Consensus 47 ~~i~~~~~~lyv~~-~~--~~~v~viD~~t~~~~~~i~~~-~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~~~~~~i~ 122 (328)
T 3dsm_A 47 QSMVIRDGIGWIVV-NN--SHVIFAIDINTFKEVGRITGF-TSPRYIHFLSDEKAYVTQIWDYRIFIINPKTYEITGYIE 122 (328)
T ss_dssp EEEEEETTEEEEEE-GG--GTEEEEEETTTCCEEEEEECC-SSEEEEEEEETTEEEEEEBSCSEEEEEETTTTEEEEEEE
T ss_pred eEEEEECCEEEEEE-cC--CCEEEEEECcccEEEEEcCCC-CCCcEEEEeCCCeEEEEECCCCeEEEEECCCCeEEEEEE
Confidence 45555544444444 33 799999999999998888643 3455555 344443566 9999998876443222
Q ss_pred eecCc--ceEEEEEeecCCeEEEEecC-CCCeEEEEecCCCCeEEEEEecCceEEEEECCc-EEEEEec
Q psy505 91 ENSQE--DVCIVERLFSSSLVAVVSLS-SPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK-KEEEEDE 155 (161)
Q Consensus 91 ~~~~~--~~~v~~~~fs~~~~~~~s~~-~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~-~~vv~~~ 155 (161)
.+... ......+++..+. ..++.. .+++|.+||.++++.+..+........++++|+ ++.++..
T Consensus 123 ~g~~~~~~~~p~~i~~~~~~-lyv~~~~~~~~v~viD~~t~~~~~~i~~g~~p~~i~~~~dG~l~v~~~ 190 (328)
T 3dsm_A 123 CPDMDMESGSTEQMVQYGKY-VYVNCWSYQNRILKIDTETDKVVDELTIGIQPTSLVMDKYNKMWTITD 190 (328)
T ss_dssp CTTCCTTTCBCCCEEEETTE-EEEEECTTCCEEEEEETTTTEEEEEEECSSCBCCCEECTTSEEEEEBC
T ss_pred cCCccccCCCcceEEEECCE-EEEEcCCCCCEEEEEECCCCeEEEEEEcCCCccceEEcCCCCEEEEEC
Confidence 22200 0012244554444 444443 377999999999998888876666678999986 5555544
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.48 E-value=3.3e-06 Score=65.28 Aligned_cols=127 Identities=8% Similarity=-0.046 Sum_probs=86.6
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccC-ccceeee------eEEEecC-Cc-eEEEEeCCcCce
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD-SPLAALA------SLSVGTK-SG-YRLFSLNSIDTL 86 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~-~~V~~l~------~lasgs~-dg-iriwd~~~~~~~ 86 (161)
.+..+++.|+|.++++ + ++.|+.||. +|+.+..+..+. ..+.++. ++++.+. ++ +..+|. +|+.+
T Consensus 38 ~~~~~~~~pdG~ilvs-~---~~~V~~~d~-~G~~~W~~~~~~~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l 111 (276)
T 3no2_A 38 ECNSVAATKAGEILFS-Y---SKGAKMITR-DGRELWNIAAPAGCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVL 111 (276)
T ss_dssp CCCEEEECTTSCEEEE-C---BSEEEEECT-TSCEEEEEECCTTCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEE
T ss_pred CCcCeEECCCCCEEEe-C---CCCEEEECC-CCCEEEEEcCCCCccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEE
Confidence 4566677889998883 3 678999999 899999998753 4666666 5665555 55 666665 56644
Q ss_pred eeEEee-c--CcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcE
Q psy505 87 EQIYEN-S--QEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 87 ~~~~~~-~--~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~ 149 (161)
.++-.. . ........+++.+++..+++.+.++.|..||.+ |+.+-++..+..+.++.+.+++
T Consensus 112 ~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~-G~~~w~~~~~~~~~~~~~~~~g 176 (276)
T 3no2_A 112 SKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN-GQLLNSVKLSGTPFSSAFLDNG 176 (276)
T ss_dssp EEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT-SCEEEEEECSSCCCEEEECTTS
T ss_pred EEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC-CCEEEEEECCCCccceeEcCCC
Confidence 332110 0 000011223467788778888788999999998 9998888766677777777763
|
| >3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae} | Back alignment and structure |
|---|
Probab=98.47 E-value=4.7e-06 Score=64.42 Aligned_cols=118 Identities=13% Similarity=0.139 Sum_probs=80.9
Q ss_pred CCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccC-ccceeee------eEEEecCCceEEEEeCCcCceeeEEeecCc
Q psy505 23 NSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD-SPLAALA------SLSVGTKSGYRLFSLNSIDTLEQIYENSQE 95 (161)
Q Consensus 23 ~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~-~~V~~l~------~lasgs~dgiriwd~~~~~~~~~~~~~~~~ 95 (161)
+|+ .++++++. |+.|.+||.++|+.+..+..|. ..+.++. +++ +..++|..||. +|+.+.+ +..+.
T Consensus 3 ~~~-~~lv~~~~--~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pdG~ilv-s~~~~V~~~d~-~G~~~W~-~~~~~- 75 (276)
T 3no2_A 3 SPQ-HLLVGGSG--WNKIAIINKDTKEIVWEYPLEKGWECNSVAATKAGEILF-SYSKGAKMITR-DGRELWN-IAAPA- 75 (276)
T ss_dssp CCC-EEEEECTT--CSEEEEEETTTTEEEEEEECCTTCCCCEEEECTTSCEEE-ECBSEEEEECT-TSCEEEE-EECCT-
T ss_pred CCC-cEEEeeCC--CCEEEEEECCCCeEEEEeCCCccCCCcCeEECCCCCEEE-eCCCCEEEECC-CCCEEEE-EcCCC-
Confidence 344 56666444 9999999999999999998876 4667666 555 34444999999 7875533 33321
Q ss_pred ceEEEEEeecCCeEEEEecCC-CCeEEEEecCCCCeEEEEEec-------CceEEEEECCc
Q psy505 96 DVCIVERLFSSSLVAVVSLSS-PRKLTVCHFKRGSEICNYSFS-------NTILAVKLNRK 148 (161)
Q Consensus 96 ~~~v~~~~fs~~~~~~~s~~~-d~~i~iWD~~~~~~i~~l~~~-------~~V~~v~~~~~ 148 (161)
...+.+..+.+++..+++.+. ++.|..+|. +|+.+.++... .....+++.++
T Consensus 76 ~~~~~~~~~~~dG~~lv~~~~~~~~v~~vd~-~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~ 135 (276)
T 3no2_A 76 GCEMQTARILPDGNALVAWCGHPSTILEVNM-KGEVLSKTEFETGIERPHAQFRQINKNKK 135 (276)
T ss_dssp TCEEEEEEECTTSCEEEEEESTTEEEEEECT-TSCEEEEEEECCSCSSGGGSCSCCEECTT
T ss_pred CccccccEECCCCCEEEEecCCCCEEEEEeC-CCCEEEEEeccCCCCcccccccCceECCC
Confidence 234667778898888887655 667888886 78888777642 13445566665
|
| >3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans} | Back alignment and structure |
|---|
Probab=98.46 E-value=2.9e-06 Score=65.03 Aligned_cols=127 Identities=4% Similarity=-0.213 Sum_probs=82.8
Q ss_pred eEEeecCCCce-EEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 17 ICCLCVNSDNC-YLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 17 v~~~~~~~d~~-~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
..+++++|+|. ++++... ++.|..||..++ ...+..+...+.+++ ++++.+.++ |.+||..+|+.. .
T Consensus 30 ~eg~~~d~~g~~l~~~~~~--~~~i~~~~~~~~--~~~~~~~~~~~~~l~~~~dg~l~v~~~~~~~i~~~d~~~g~~~-~ 104 (296)
T 3e5z_A 30 TEGPVYVPARSAVIFSDVR--QNRTWAWSDDGQ--LSPEMHPSHHQNGHCLNKQGHLIACSHGLRRLERQREPGGEWE-S 104 (296)
T ss_dssp EEEEEEEGGGTEEEEEEGG--GTEEEEEETTSC--EEEEESSCSSEEEEEECTTCCEEEEETTTTEEEEECSTTCCEE-E
T ss_pred ccCCeEeCCCCEEEEEeCC--CCEEEEEECCCC--eEEEECCCCCcceeeECCCCcEEEEecCCCeEEEEcCCCCcEE-E
Confidence 45777888997 4554333 899999999987 677777888888887 566665555 999999887632 3
Q ss_pred EEeecCc--ceEEEEEeecCCeEEEEec----C-------------CCCeEEEEecCCCCeEEEEEecCceEEEEECCcE
Q psy505 89 IYENSQE--DVCIVERLFSSSLVAVVSL----S-------------SPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK 149 (161)
Q Consensus 89 ~~~~~~~--~~~v~~~~fs~~~~~~~s~----~-------------~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~ 149 (161)
+...... ...+..++++|++...++. . ..+.|..+|.. ++............+++|+|++
T Consensus 105 ~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~~gi~~s~dg 183 (296)
T 3e5z_A 105 IADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD-GTLSAPIRDRVKPNGLAFLPSG 183 (296)
T ss_dssp EECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT-SCEEEEECCCSSEEEEEECTTS
T ss_pred EeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC-CCEEEeecCCCCCccEEECCCC
Confidence 3322211 1123467889988777752 1 12356666655 5533222344677899999983
|
| >3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=98.45 E-value=5.5e-06 Score=65.09 Aligned_cols=128 Identities=4% Similarity=-0.072 Sum_probs=80.6
Q ss_pred eecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeeeeEEEe-----------------------------
Q psy505 20 LCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALASLSVG----------------------------- 70 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~~lasg----------------------------- 70 (161)
+.++|||..|++.+. ++.|.+||+.+++....+..+.....+-..|+..
T Consensus 86 ~~~spdg~~l~~~~~--~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~~~ 163 (396)
T 3c5m_A 86 GFISTDERAFFYVKN--ELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEFYH 163 (396)
T ss_dssp CEECTTSSEEEEEET--TTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHHH
T ss_pred ceECCCCCEEEEEEc--CCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeeecc
Confidence 456889999988776 7799999999988766666565533221122221
Q ss_pred -cCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecC-CeE--EEEecCCC----CeEEEEecCCCCeEEEEEe--cCc
Q psy505 71 -TKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSS-SLV--AVVSLSSP----RKLTVCHFKRGSEICNYSF--SNT 139 (161)
Q Consensus 71 -s~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~--~~~s~~~d----~~i~iWD~~~~~~i~~l~~--~~~ 139 (161)
..+. +.+||+.+++.. .+.. +.. .+..+.|+| ++. ++++.... ..|.+||+..++....... ...
T Consensus 164 ~~~~~~l~~~d~~~g~~~-~~~~-~~~--~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~l~~~~~~~~ 239 (396)
T 3c5m_A 164 TNPTCRLIKVDIETGELE-VIHQ-DTA--WLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDGSNVRKIKEHAEGES 239 (396)
T ss_dssp TCCCEEEEEEETTTCCEE-EEEE-ESS--CEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTSCCCEESSCCCTTEE
T ss_pred CCCcceEEEEECCCCcEE-eecc-CCc--ccccceECCCCCCEEEEEecCCCCCCCceEEEEECCCCceeEeeccCCCcc
Confidence 2344 999999887643 3433 222 356788999 664 34443222 4699999876653322222 225
Q ss_pred eEEEEECCcE--EEEE
Q psy505 140 ILAVKLNRKK--EEEE 153 (161)
Q Consensus 140 V~~v~~~~~~--~vv~ 153 (161)
+..+.|+|++ ++.+
T Consensus 240 ~~~~~~spdg~~l~~~ 255 (396)
T 3c5m_A 240 CTHEFWIPDGSAMAYV 255 (396)
T ss_dssp EEEEEECTTSSCEEEE
T ss_pred ccceEECCCCCEEEEE
Confidence 8889999983 5554
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.44 E-value=4.2e-06 Score=62.77 Aligned_cols=133 Identities=11% Similarity=-0.014 Sum_probs=84.7
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
.....++++|+|..+++... ++.|.+||..+.........+.....+++ ++++...++ |.+||...+...
T Consensus 108 ~~p~~i~~~~~g~l~v~~~~--~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~- 184 (270)
T 1rwi_B 108 NYPEGLAVDTQGAVYVADRG--NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV- 184 (270)
T ss_dssp SSEEEEEECTTCCEEEEEGG--GTEEEEECTTCCSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEE-
T ss_pred CCCcceEECCCCCEEEEECC--CCEEEEEECCCceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCCceE-
Confidence 34678888999987776443 78899998766544333333334566666 555555555 999998765422
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe--cCceEEEEECCcE-EEEE
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF--SNTILAVKLNRKK-EEEE 153 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~~~-~vv~ 153 (161)
.....+. .....+++++++...++...++.|.+||....... .+.. ...+.+++++|++ +.++
T Consensus 185 ~~~~~~~--~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~~~~-~~~~~~~~~p~~i~~~~~g~l~v~ 250 (270)
T 1rwi_B 185 VLPFTDI--TAPWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTST-VLPFTGLNTPLAVAVDSDRTVYVA 250 (270)
T ss_dssp ECCCSSC--CSEEEEEECTTCCEEEEETTTSCEEEECTTCSCCE-ECCCCSCSCEEEEEECTTCCEEEE
T ss_pred eecccCC--CCceEEEECCCCCEEEEECCCCcEEEEcCCCCcce-eeccCCCCCceeEEECCCCCEEEE
Confidence 1111111 12567889998766676666788999998765533 2222 2578999999874 4444
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=98.41 E-value=1.9e-05 Score=67.38 Aligned_cols=120 Identities=14% Similarity=0.049 Sum_probs=85.0
Q ss_pred cCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeC--CcCceeeEEee
Q psy505 22 VNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLN--SIDTLEQIYEN 92 (161)
Q Consensus 22 ~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~--~~~~~~~~~~~ 92 (161)
.+|++..+++... +++|.++|..+++.+.++..... +..+. ++.+++.|+ |.+||+. +++.+.++..|
T Consensus 163 ~d~~~~~~V~~~~--~~~V~viD~~t~~v~~~i~~g~~-p~~v~~SpDGr~lyv~~~dg~V~viD~~~~t~~~v~~i~~G 239 (567)
T 1qks_A 163 WDLENLFSVTLRD--AGQIALIDGSTYEIKTVLDTGYA-VHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIKIG 239 (567)
T ss_dssp CCGGGEEEEEETT--TTEEEEEETTTCCEEEEEECSSC-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEECC
T ss_pred cCCCceEEEEeCC--CCeEEEEECCCCeEEEEEeCCCC-ccceEECCCCCEEEEEcCCCeEEEEECCCCCCcEeEEEecC
Confidence 4555555555443 89999999999999988875433 34555 666778888 9999995 66655444333
Q ss_pred cCcceEEEEEeec----CCe-EEEEecCCCCeEEEEecCCCCeEEEEEec------------CceEEEEECCc
Q psy505 93 SQEDVCIVERLFS----SSL-VAVVSLSSPRKLTVCHFKRGSEICNYSFS------------NTILAVKLNRK 148 (161)
Q Consensus 93 ~~~~~~v~~~~fs----~~~-~~~~s~~~d~~i~iWD~~~~~~i~~l~~~------------~~V~~v~~~~~ 148 (161)
. .-..++|+ |++ .+.++...+++|.|+|..+.+.+..+.-. ..|.++.++++
T Consensus 240 ~----~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~ 308 (567)
T 1qks_A 240 S----EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHY 308 (567)
T ss_dssp S----EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSS
T ss_pred C----CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEEcCC
Confidence 2 23578899 576 45556667789999999999998877521 25777887775
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=98.40 E-value=4.1e-05 Score=58.99 Aligned_cols=141 Identities=8% Similarity=-0.062 Sum_probs=86.9
Q ss_pred ceeEEeecCCCceEEEEcCCC-------CcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEE
Q psy505 15 NGICCLCVNSDNCYLAYPGSN-------SIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFS 79 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~-------~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd 79 (161)
.....++++|+|.+.++.... ..+.-+||.+.....+..+..+-...+.++ ++++.+.++ |.+||
T Consensus 98 ~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~ 177 (297)
T 3g4e_A 98 NRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYIDSLSYSVDAFD 177 (297)
T ss_dssp EEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred CCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEecCCCCcEEEEe
Confidence 357788889999877754210 013345665553323333333333345555 445666666 99999
Q ss_pred e--CCcCce-eeEE-eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec-CceEEEEEC-Cc--EEE
Q psy505 80 L--NSIDTL-EQIY-ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS-NTILAVKLN-RK--KEE 151 (161)
Q Consensus 80 ~--~~~~~~-~~~~-~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~-~~V~~v~~~-~~--~~v 151 (161)
+ .+|... .+.+ ......-....+++++++...++....+.|..||.++|+.+..+..+ ..+.+++|. |+ .|.
T Consensus 178 ~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lwva~~~~~~v~~~d~~tG~~~~~i~~p~~~~t~~~f~g~d~~~L~ 257 (297)
T 3g4e_A 178 YDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLWVACYNGGRVIRLDPVTGKRLQTVKLPVDKTTSCCFGGKNYSEMY 257 (297)
T ss_dssp ECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEEEEEETTTEEEEECTTTCCEEEEEECSSSBEEEEEEESGGGCEEE
T ss_pred ccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEEEEEcCCCEEEEEcCCCceEEEEEECCCCCceEEEEeCCCCCEEE
Confidence 7 455421 1122 11111123567889888766666555678999999999999888865 789999997 65 666
Q ss_pred EEec
Q psy505 152 EEDE 155 (161)
Q Consensus 152 v~~~ 155 (161)
|...
T Consensus 258 vt~~ 261 (297)
T 3g4e_A 258 VTCA 261 (297)
T ss_dssp EEEB
T ss_pred EEcC
Confidence 6553
|
| >2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A* | Back alignment and structure |
|---|
Probab=98.38 E-value=2.3e-05 Score=67.61 Aligned_cols=135 Identities=7% Similarity=0.025 Sum_probs=87.5
Q ss_pred CCceeEEeecCCCceEEEEcCCCC---cceEEEEEcCC------CC-ceeeeeccCccceeee-----eEE-EecCC---
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNS---IGEVQIFDADN------LH-AKTMIPAHDSPLAALA-----SLS-VGTKS--- 73 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~---dg~v~iWd~~~------~~-~~~~l~~H~~~V~~l~-----~la-sgs~d--- 73 (161)
++..+..++++|||.+|++.+... +..|.+||+.+ +. ....+..|...+...- .|+ .+..+
T Consensus 231 ~~~~~~~~~~SpDg~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~~~~~~~~~~~s~dg~~l~~~s~~~~~~ 310 (710)
T 2xdw_A 231 EPKWMGGAELSDDGRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLIDNFEGEYDYVTNEGTVFTFKTNRHSPN 310 (710)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTT
T ss_pred CCeEEEEEEEcCCCCEEEEEEEccCCCccEEEEEECcccccccCCccceEEeeCCCCcEEEEEeccCCEEEEEECCCCCC
Confidence 344467888899999988765310 45899999987 53 4677777776655432 333 33322
Q ss_pred c-eEEEEeCCcCc--eeeEEeecCcceEEEEEeecCCeEEEEecCCCC--eEEEEecCCCCeEEEEEe-cCceEEEEECC
Q psy505 74 G-YRLFSLNSIDT--LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPR--KLTVCHFKRGSEICNYSF-SNTILAVKLNR 147 (161)
Q Consensus 74 g-iriwd~~~~~~--~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~--~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~ 147 (161)
+ +.+||+.+++. ...+. .|.....+..+.|+++...+++...|+ .|.+||+.+|+.+..+.+ ...|.++.++|
T Consensus 311 ~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~g~~~~~l~~~~~~v~~~~~s~ 389 (710)
T 2xdw_A 311 YRLINIDFTDPEESKWKVLV-PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLATGALLKIFPLEVGSVVGYSGQK 389 (710)
T ss_dssp CEEEEEETTSCCGGGCEEEE-CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTTCCEEEEECCCSSEEEEEECCT
T ss_pred CEEEEEeCCCCCcccceecc-CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCCCCEEEecCCCCceEEEEecCC
Confidence 3 88889877642 23333 333223466778886555555554555 477789888888788875 46788899988
Q ss_pred c
Q psy505 148 K 148 (161)
Q Consensus 148 ~ 148 (161)
+
T Consensus 390 d 390 (710)
T 2xdw_A 390 K 390 (710)
T ss_dssp T
T ss_pred C
Confidence 6
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=98.32 E-value=8.6e-05 Score=55.88 Aligned_cols=138 Identities=6% Similarity=-0.085 Sum_probs=87.5
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee-eeeccCccceeee------eEEEecCCc-eEEEEeCCcCce
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT-MIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~-~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~ 86 (161)
..+..++++|+|.+.++... ++.|..||. +++... .+..+...+.+++ ++++...++ +..||. +++..
T Consensus 99 ~~~~~i~~~~~g~l~v~~~~--~~~i~~~d~-~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~~ 174 (299)
T 2z2n_A 99 SAPYGITEGPNGDIWFTEMN--GNRIGRITD-DGKIREYELPNKGSYPSFITLGSDNALWFTENQNNAIGRITE-SGDIT 174 (299)
T ss_dssp CCEEEEEECTTSCEEEEETT--TTEEEEECT-TCCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE
T ss_pred CCceeeEECCCCCEEEEecC--CceEEEECC-CCCEEEecCCCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC-CCcEE
Confidence 35778888999887776544 688999998 555432 2333445567776 445555555 999998 66532
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec---CceEEEEECCc-EEEEEe--ccceee
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS---NTILAVKLNRK-KEEEED--EEEEKK 160 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~---~~V~~v~~~~~-~~vv~~--~~~~~~ 160 (161)
.. ...........+++++++...++...++.|.+||. +++. ..+..+ ..+.++.++++ .+.++. .+.|.+
T Consensus 175 -~~-~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~~-~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 250 (299)
T 2z2n_A 175 -EF-KIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGEI-TEFKIPTPNARPHAITAGAGIDLWFTEWGANKIGR 250 (299)
T ss_dssp -EE-ECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCE-EEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred -Ee-eCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCcE-EEEECCCCCCCceeEEECCCCCEEEeccCCceEEE
Confidence 22 11111223567889887765666555678999999 7764 344333 67899999887 555553 345543
|
| >1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A | Back alignment and structure |
|---|
Probab=98.31 E-value=9.5e-06 Score=60.75 Aligned_cols=138 Identities=9% Similarity=-0.064 Sum_probs=84.0
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
...+++++|+|.++++.. ++.|.+||..++.. ..+. .....+.+++ ++++...++ |.+||..+.....
T Consensus 68 ~p~~i~~~~~g~l~v~~~---~~~i~~~d~~~~~~-~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~ 143 (270)
T 1rwi_B 68 QPQGLAVDGAGTVYVTDF---NNRVVTLAAGSNNQ-TVLPFDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQTV 143 (270)
T ss_dssp SCCCEEECTTCCEEEEET---TTEEEEECTTCSCC-EECCCCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTCCSCEE
T ss_pred CcceeEECCCCCEEEEcC---CCEEEEEeCCCceE-eeeecCCcCCCcceEECCCCCEEEEECCCCEEEEEECCCceeEe
Confidence 355677788888666533 57899999886544 3333 2334566666 455555555 9999865543221
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc-EEEEEe--ccceee
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK-KEEEED--EEEEKK 160 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~-~~vv~~--~~~~~~ 160 (161)
...... .....+++++++...++...++.|.+||...+....... ....+.+++++++ .+.++. .++|++
T Consensus 144 -~~~~~~--~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~ 217 (270)
T 1rwi_B 144 -LPFTGL--NDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVK 217 (270)
T ss_dssp -CCCCSC--CSCCCEEECTTCCEEEEEGGGTEEEEECTTTCCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEE
T ss_pred -eccccC--CCceeEEEeCCCCEEEEECCCCEEEEEecCCCceEeecccCCCCceEEEECCCCCEEEEECCCCcEEE
Confidence 111111 123467788877666665556789999988776432211 1267889999998 555555 345554
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.27 E-value=7.2e-06 Score=71.20 Aligned_cols=111 Identities=14% Similarity=0.070 Sum_probs=68.7
Q ss_pred eeEEeecCCCceEEEEcCCCCc----ceEEEEEcCCCCceeeeeccCccceee-----eeEEEecCC-------------
Q psy505 16 GICCLCVNSDNCYLAYPGSNSI----GEVQIFDADNLHAKTMIPAHDSPLAAL-----ASLSVGTKS------------- 73 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~d----g~v~iWd~~~~~~~~~l~~H~~~V~~l-----~~lasgs~d------------- 73 (161)
.+..++++|||++||++.+. + .+|++||+.+++.+... .+...+.++ ..|+.++.+
T Consensus 164 ~~~~~~~SPDG~~la~~~~~-~G~e~~~i~v~dl~tg~~~~~~-~~~~~~~~~~wspD~~l~~~~~~~~~~~~~~~~~~~ 241 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQD-GGSDWRTVKFVGVADGKPLADE-LKWVKFSGLAWLGNDALLYSRFAEPKEGQAFQALNY 241 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEE-TTCSEEEEEEEETTTCCEEEEE-EEEEESCCCEESTTSEEEEEECCCC--------CCC
T ss_pred EEEeEEECCCCCEEEEEEcC-CCCceEEEEEEECCCCCCCCcc-CCCceeccEEEECCCEEEEEEecCcccccccccCCC
Confidence 56788899999999987541 2 46999999999875431 111111222 245544432
Q ss_pred -c-eEEEEeCCcCce-eeEEeecCcceEEEEEeecCCeEEEEecC-----CCCeEEEEecCCC
Q psy505 74 -G-YRLFSLNSIDTL-EQIYENSQEDVCIVERLFSSSLVAVVSLS-----SPRKLTVCHFKRG 128 (161)
Q Consensus 74 -g-iriwd~~~~~~~-~~~~~~~~~~~~v~~~~fs~~~~~~~s~~-----~d~~i~iWD~~~~ 128 (161)
. |++|++.++... ..+++...++..+..+.||||+..++..+ ..+.|.+||+.++
T Consensus 242 ~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 242 NQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp CCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred CCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 2 888998776421 13444433222466788999985444322 2458999999877
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.27 E-value=4.3e-05 Score=58.26 Aligned_cols=141 Identities=9% Similarity=0.001 Sum_probs=85.8
Q ss_pred eeEEeecCCCceEEEEcCCCCc---------------ceEEEEEcCCCCceeeeeccCccceeee-----------eEEE
Q psy505 16 GICCLCVNSDNCYLAYPGSNSI---------------GEVQIFDADNLHAKTMIPAHDSPLAALA-----------SLSV 69 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~d---------------g~v~iWd~~~~~~~~~l~~H~~~V~~l~-----------~las 69 (161)
.+..++++|+|.+.++... + +.|..||.. ++...... +....++++ ++++
T Consensus 118 ~~~~i~~d~~g~l~v~~~~--~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~-~~~~~~~i~~~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 118 GCNDCAFDYEGNLWITAPA--GEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDT-AFQFPNGIAVRHMNDGRPYQLIVA 193 (314)
T ss_dssp CCCEEEECTTSCEEEEECB--CBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEE-EESSEEEEEEEECTTSCEEEEEEE
T ss_pred CCcCEEECCCCCEEEEecC--cccccccccccccCCCCeEEEECCC-CCEEEecc-CCCCcceEEEecccCCCCCEEEEE
Confidence 4678888999987776543 3 567777765 55433222 212222222 2344
Q ss_pred ecCCc-eEEEEeC-CcCce-eeEEee-cCcc-eEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec-CceEEE
Q psy505 70 GTKSG-YRLFSLN-SIDTL-EQIYEN-SQED-VCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS-NTILAV 143 (161)
Q Consensus 70 gs~dg-iriwd~~-~~~~~-~~~~~~-~~~~-~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~-~~V~~v 143 (161)
.+.++ |.+||.+ ++... ...+.. .... .....+++++++...++...++.|.+||.++++.+..+..+ ..+.++
T Consensus 194 ~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~i 273 (314)
T 1pjx_A 194 ETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNL 273 (314)
T ss_dssp ETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEE
T ss_pred ECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcEeEEEeCCCCCceeE
Confidence 45556 9999986 33211 011111 1111 23567889998877777555679999999988877777654 789999
Q ss_pred EECCcE--EEEEecc--ceee
Q psy505 144 KLNRKK--EEEEDEE--EEKK 160 (161)
Q Consensus 144 ~~~~~~--~vv~~~~--~~~~ 160 (161)
+|+|++ +.+...+ .|.+
T Consensus 274 ~~~~dg~~l~v~~~~~~~l~~ 294 (314)
T 1pjx_A 274 HFKPQTKTIFVTEHENNAVWK 294 (314)
T ss_dssp EECTTSSEEEEEETTTTEEEE
T ss_pred EECCCCCEEEEEeCCCCeEEE
Confidence 999873 6666555 5543
|
| >2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A* | Back alignment and structure |
|---|
Probab=98.27 E-value=0.00013 Score=54.86 Aligned_cols=133 Identities=8% Similarity=-0.014 Sum_probs=86.1
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee-eeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT-MIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~-~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
...+.+++++|+|...++... ++.|..||.. ++... .+..+...+.+++ ++++...++ +..||.. ++
T Consensus 14 ~~~~~~i~~d~~g~l~v~~~~--~~~v~~~d~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~- 88 (299)
T 2z2n_A 14 DTGPYGITVSDKGKVWITQHK--ANMISCINLD-GKITEYPLPTPDAKVMCLTISSDGEVWFTENAANKIGRITKK-GI- 88 (299)
T ss_dssp SCCEEEEEECTTSCEEEEETT--TTEEEEECTT-CCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-
T ss_pred CCCccceEECCCCCEEEEecC--CCcEEEEcCC-CCeEEecCCcccCceeeEEECCCCCEEEeCCCCCeEEEECCC-Cc-
Confidence 346888999999988777554 6899999988 55332 2233456677776 455555556 9999975 33
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe---cCceEEEEECCc-EEEEEe
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF---SNTILAVKLNRK-KEEEED 154 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~---~~~V~~v~~~~~-~~vv~~ 154 (161)
.. .+...........+++++++...++...++.|.+||. +++.. .+.. ...+.++.++++ .+.++.
T Consensus 89 ~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g~~~-~~~~~~~~~~~~~i~~~~~g~l~v~~ 158 (299)
T 2z2n_A 89 IK-EYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DGKIR-EYELPNKGSYPSFITLGSDNALWFTE 158 (299)
T ss_dssp EE-EEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECTTSCEEEEE
T ss_pred EE-EEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CCCEE-EecCCCCCCCCceEEEcCCCCEEEEe
Confidence 32 2221111224667889988766666555678999998 66543 3332 256889999987 444444
|
| >2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ... | Back alignment and structure |
|---|
Probab=98.23 E-value=1e-05 Score=64.64 Aligned_cols=95 Identities=12% Similarity=0.068 Sum_probs=66.3
Q ss_pred cceEEEEEcCCCCceeeeeccCccceeee------eEEEec----------CCc-eEEEEeCCcCceeeEEeecC---cc
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGT----------KSG-YRLFSLNSIDTLEQIYENSQ---ED 96 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs----------~dg-iriwd~~~~~~~~~~~~~~~---~~ 96 (161)
|+.|.+||..+++.+.++..+..+ .++ ++.+++ .++ |.+||..+++...++..+.. ..
T Consensus 30 d~~v~v~D~~t~~~~~~i~~g~~p--~i~~spdg~~lyv~~~~~~~~~~g~~~~~v~v~d~~t~~~~~~i~~~~~~~~~g 107 (361)
T 2oiz_A 30 ESRVHVYDYTNGKFLGMVPTAFNG--HVQVSNDGKKIYTMTTYHERITRGKRSDVVEVWDADKLTFEKEISLPPKRVQGL 107 (361)
T ss_dssp GCEEEEEETTTCCEEEEEECCEEE--EEEECTTSSEEEEEEEEETTSSSSCEEEEEEEEETTTCCEEEEEEECTTBCCBC
T ss_pred cCeEEEEECCCCeEEEEecCCCCC--ceEECCCCCEEEEEEecccccccCCCCCEEEEEECcCCcEEEEEEcCccccccC
Confidence 789999999999999999888777 555 444443 355 99999988776544322210 00
Q ss_pred eEEEEEeecCCeEEEEe-c-CCCCeEEEEecCCCCeEEE
Q psy505 97 VCIVERLFSSSLVAVVS-L-SSPRKLTVCHFKRGSEICN 133 (161)
Q Consensus 97 ~~v~~~~fs~~~~~~~s-~-~~d~~i~iWD~~~~~~i~~ 133 (161)
.....++|+|++..+.. . ..+++|.+||+++++.+.+
T Consensus 108 ~~p~~i~~spdg~~l~v~n~~~~~~v~v~d~~~~~~~~~ 146 (361)
T 2oiz_A 108 NYDGLFRQTTDGKFIVLQNASPATSIGIVDVAKGDYVED 146 (361)
T ss_dssp CCGGGEEECTTSSEEEEEEESSSEEEEEEETTTTEEEEE
T ss_pred CCcceEEECCCCCEEEEECCCCCCeEEEEECCCCcEEEE
Confidence 11245789998854443 2 2367999999999998877
|
| >1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ... | Back alignment and structure |
|---|
Probab=98.15 E-value=7.2e-05 Score=57.00 Aligned_cols=132 Identities=8% Similarity=-0.022 Sum_probs=80.6
Q ss_pred eEEeecCCCceEEEE-------cCCCCcceEEEEEcCCCCceeeee----ccCccceeee-------eEEEecCCceEEE
Q psy505 17 ICCLCVNSDNCYLAY-------PGSNSIGEVQIFDADNLHAKTMIP----AHDSPLAALA-------SLSVGTKSGYRLF 78 (161)
Q Consensus 17 v~~~~~~~d~~~la~-------~g~~~dg~v~iWd~~~~~~~~~l~----~H~~~V~~l~-------~lasgs~dgiriw 78 (161)
..+++++++|.++++ ... ++.|..||..+++...... ++...+.+++ ++++...+++.+|
T Consensus 20 ~~~~~~~~~g~l~~~~~~~~~~~~~--~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~i~~~~~~g~l~v~~~~~~l~~~ 97 (314)
T 1pjx_A 20 AEGPVFDKNGDFYIVAPEVEVNGKP--AGEILRIDLKTGKKTVICKPEVNGYGGIPAGCQCDRDANQLFVADMRLGLLVV 97 (314)
T ss_dssp CEEEEECTTSCEEEEETTCEETTEE--CCEEEEECTTTCCEEEEECCEETTEECCEEEEEECSSSSEEEEEETTTEEEEE
T ss_pred ccCceECCCCCEEEEEeccccCCCC--CCEEEEEeCCCCcEEEEEecccCCCCCCCceEEEecCCCcEEEEECCCCEEEE
Confidence 456677888877776 333 7899999998887543221 2445566665 3444445568899
Q ss_pred EeCCcCceeeE-EeecC--cceEEEEEeecCCeEEEEecCCC---------------CeEEEEecCCCCeEEEEEecCce
Q psy505 79 SLNSIDTLEQI-YENSQ--EDVCIVERLFSSSLVAVVSLSSP---------------RKLTVCHFKRGSEICNYSFSNTI 140 (161)
Q Consensus 79 d~~~~~~~~~~-~~~~~--~~~~v~~~~fs~~~~~~~s~~~d---------------~~i~iWD~~~~~~i~~l~~~~~V 140 (161)
|.+ ++. ..+ ..... ....+..+++++++...++...+ +.|..||.. ++...........
T Consensus 98 d~~-g~~-~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~~~~~~~~~~ 174 (314)
T 1pjx_A 98 QTD-GTF-EEIAKKDSEGRRMQGCNDCAFDYEGNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMIQVDTAFQFP 174 (314)
T ss_dssp ETT-SCE-EECCSBCTTSCBCBCCCEEEECTTSCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEEEEEEEESSE
T ss_pred eCC-CCE-EEEEeccCCCccccCCcCEEECCCCCEEEEecCcccccccccccccCCCCeEEEECCC-CCEEEeccCCCCc
Confidence 987 653 222 21111 11235678889887666655433 468888876 6654433334566
Q ss_pred EEEEEC----CcE--EEEE
Q psy505 141 LAVKLN----RKK--EEEE 153 (161)
Q Consensus 141 ~~v~~~----~~~--~vv~ 153 (161)
.+++++ |++ +.++
T Consensus 175 ~~i~~~~~~d~dg~~l~v~ 193 (314)
T 1pjx_A 175 NGIAVRHMNDGRPYQLIVA 193 (314)
T ss_dssp EEEEEEECTTSCEEEEEEE
T ss_pred ceEEEecccCCCCCEEEEE
Confidence 888999 885 4444
|
| >2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus} | Back alignment and structure |
|---|
Probab=98.13 E-value=3.5e-05 Score=59.70 Aligned_cols=126 Identities=7% Similarity=-0.010 Sum_probs=75.7
Q ss_pred eeEEeecCCCceEEEEcCCCCc------c-eEEEEEcCCCCceeeeeccCccceeee----eEEEecCC--------c-e
Q psy505 16 GICCLCVNSDNCYLAYPGSNSI------G-EVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKS--------G-Y 75 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~d------g-~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~d--------g-i 75 (161)
.+..++++||| +++++.. + . ..+||.+.+++ ...+..+ ..+.+++ .|+.++.+ . +
T Consensus 172 ~~~~~~~spdg-~~~~~~~--~~~~~~~~~~~~l~~~d~~~-~~~l~~~-~~~~~~spdg~~l~~~~~~~~~~~~~~~~l 246 (347)
T 2gop_A 172 RFSSGIWHRDK-IVVNVPH--REIIPQYFKFWDIYIWEDGK-EEKMFEK-VSFYAVDSDGERILLYGKPEKKYMSEHNKL 246 (347)
T ss_dssp TTCEEEEETTE-EEEEEEC--CCSSCCSSCCEEEEEEETTE-EEEEEEE-ESEEEEEECSSCEEEEECCSSSCCCSSCEE
T ss_pred CcccccCCCCe-EEEEEec--ccccccccccccEEEeCCCc-eEEeccC-cceeeECCCCCEEEEEEccccCCccccceE
Confidence 35567788999 5555432 2 2 44555554444 3455545 5555555 55544422 3 6
Q ss_pred EEEEeCCcCceeeEEeecCcceEEEE-EeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEe
Q psy505 76 RLFSLNSIDTLEQIYENSQEDVCIVE-RLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 76 riwd~~~~~~~~~~~~~~~~~~~v~~-~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~ 154 (161)
.+|| +++ ...+..++.. .+.. +.|+ ++ .+++++.++.++|| +.+++....+.....|.++.|+| +++++.
T Consensus 247 ~~~d--~~~-~~~l~~~~~~--~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~g~~~~~~~~~~~v~~~~~s~-~~~~~~ 317 (347)
T 2gop_A 247 YIYD--GKE-VMGILDEVDR--GVGQAKIKD-GK-VYFTLFEEGSVNLY-IWDGEIKPIAKGRHWIMGFDVDE-IVVYLK 317 (347)
T ss_dssp EEEC--SSC-EEESSTTCCS--EEEEEEEET-TE-EEEEEEETTEEEEE-EESSSEEEEECSSSEEEEEEESS-SEEEEE
T ss_pred EEEC--CCc-eEeccccCCc--ccCCccEEc-Cc-EEEEEecCCcEEEE-EcCCceEEEecCCCeEEeeeeeC-cEEEEE
Confidence 6777 544 3334444432 3554 7888 88 55555567899999 87777644444567899999999 766654
Q ss_pred c
Q psy505 155 E 155 (161)
Q Consensus 155 ~ 155 (161)
.
T Consensus 318 ~ 318 (347)
T 2gop_A 318 E 318 (347)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=98.13 E-value=8.7e-05 Score=64.08 Aligned_cols=138 Identities=10% Similarity=0.065 Sum_probs=81.7
Q ss_pred ceeEEeecCCCceEEEEc----CCCCcceEEEEEcCCCCcee-eeecc--Cccceeee--eEEEecCC------------
Q psy505 15 NGICCLCVNSDNCYLAYP----GSNSIGEVQIFDADNLHAKT-MIPAH--DSPLAALA--SLSVGTKS------------ 73 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~----g~~~dg~v~iWd~~~~~~~~-~l~~H--~~~V~~l~--~lasgs~d------------ 73 (161)
..+..++++|||++||++ |+ .+.+|++||+.+|+.+. .+.+. .++.++ . .|+.++.+
T Consensus 129 ~~l~~~~~SpDg~~lAy~~~~~G~-~~~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-Dg~~l~y~~~~~~~~~~~~~~~~ 206 (693)
T 3iuj_A 129 TALDQLSFSRDGRILAYSLSLAGS-DWREIHLMDVESKQPLETPLKDVKFSGISWL-GNEGFFYSSYDKPDGSELSARTD 206 (693)
T ss_dssp CEEEEEEECTTSSEEEEEEECSSC-CEEEEEEEETTTCSEEEEEEEEEESCCCEEE-TTTEEEEEESSCCC-------CC
T ss_pred EEEEEEEECCCCCEEEEEEecCCC-ceEEEEEEECCCCCCCccccCCceeccEEEe-CCCEEEEEEecCcccccccccCC
Confidence 357788899999999974 33 14679999999998654 23332 344555 4 45555544
Q ss_pred -c-eEEEEeCCcCce-eeEEeecC-cceEEEEEeecCCeEEEE--e--cCCCCeEEEEecCCCC-eEEEEE-ecCceEEE
Q psy505 74 -G-YRLFSLNSIDTL-EQIYENSQ-EDVCIVERLFSSSLVAVV--S--LSSPRKLTVCHFKRGS-EICNYS-FSNTILAV 143 (161)
Q Consensus 74 -g-iriwd~~~~~~~-~~~~~~~~-~~~~v~~~~fs~~~~~~~--s--~~~d~~i~iWD~~~~~-~i~~l~-~~~~V~~v 143 (161)
. |++|++.++... ..+++... ++....++.|||++..++ + +..++.|.+||+.++. ....+. ..+.....
T Consensus 207 ~~~v~~~~lgt~~~~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~ 286 (693)
T 3iuj_A 207 QHKVYFHRLGTAQEDDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSL 286 (693)
T ss_dssp CCEEEEEETTSCGGGCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEE
T ss_pred CcEEEEEECCCCcccceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEE
Confidence 2 888998765321 13444332 233456788999886553 2 2234689999998763 334443 23333332
Q ss_pred -EECCcEEEEEe
Q psy505 144 -KLNRKKEEEED 154 (161)
Q Consensus 144 -~~~~~~~vv~~ 154 (161)
.-..+.+++..
T Consensus 287 ~~~~g~~l~~~t 298 (693)
T 3iuj_A 287 VDNKGSTLYLLT 298 (693)
T ss_dssp EEEETTEEEEEE
T ss_pred EeccCCEEEEEE
Confidence 22234555554
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=98.13 E-value=0.00056 Score=51.32 Aligned_cols=132 Identities=11% Similarity=0.001 Sum_probs=84.8
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee-eeeccCccceeee------eEEEecCCc-eEEEEeCCcCce
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT-MIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~-~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~ 86 (161)
....+++++++|...++... ++.|..||.. ++... .+..+...+.+++ ++++...++ |..||.. ++.
T Consensus 20 ~~p~~i~~d~~g~l~v~~~~--~~~v~~~~~~-~~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~d~~-g~~- 94 (300)
T 2qc5_A 20 SGPYGITSSEDGKVWFTQHK--ANKISSLDQS-GRIKEFEVPTPDAKVMCLIVSSLGDIWFTENGANKIGKLSKK-GGF- 94 (300)
T ss_dssp CCEEEEEECTTSCEEEEETT--TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECTT-SCE-
T ss_pred CCcceeeECCCCCEEEEcCC--CCeEEEECCC-CceEEEECCCCCCcceeEEECCCCCEEEEecCCCeEEEECCC-CCe-
Confidence 45778888999987776544 7899999988 55432 2333345566776 444444455 9999987 543
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe---cCceEEEEECCc-EEEEEe
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF---SNTILAVKLNRK-KEEEED 154 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~---~~~V~~v~~~~~-~~vv~~ 154 (161)
. .+...........+++.+++...++...++.|..||.. ++.. .+.. ...+.++.+.++ ++.+..
T Consensus 95 ~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 95 T-EYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTAD-GTIY-EYDLPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp E-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTT-SCEE-EEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred E-EecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCC-CCEE-EccCCCCCCCceeEEECCCCCEEEEe
Confidence 2 22221111235678888877666666556789999987 6654 3433 256889999886 455544
|
| >1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum} | Back alignment and structure |
|---|
Probab=98.11 E-value=9.8e-05 Score=64.05 Aligned_cols=133 Identities=13% Similarity=0.069 Sum_probs=82.6
Q ss_pred CCceeEEeecCCCceEEEEcCCC---CcceEEEEEcCCC--CceeeeeccCccceeee-----eEEEecC----Cc-eEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSN---SIGEVQIFDADNL--HAKTMIPAHDSPLAALA-----SLSVGTK----SG-YRL 77 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~---~dg~v~iWd~~~~--~~~~~l~~H~~~V~~l~-----~lasgs~----dg-iri 77 (161)
++..+..++++|||.+|++.+.. ....|.+||+.++ ++...+..+...+.... .|+..++ ++ +.+
T Consensus 266 ~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~l~~~~~~~~~~~~~dg~~l~~~s~~~~~~~~l~~ 345 (741)
T 1yr2_A 266 LPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGKIGPVTALIPDLKAQWDFVDGVGDQLWFVSGDGAPLKKIVR 345 (741)
T ss_dssp CTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTEECCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEE
T ss_pred CCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCCCcccEEecCCCCceEEEEeccCCEEEEEECCCCCCCEEEE
Confidence 33347788889999988876641 0238999999887 42566666655444432 4444443 33 888
Q ss_pred EEeCCcC-ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecC-CCCeEEEEEe--cCceEEEEECCc
Q psy505 78 FSLNSID-TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK-RGSEICNYSF--SNTILAVKLNRK 148 (161)
Q Consensus 78 wd~~~~~-~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~-~~~~i~~l~~--~~~V~~v~~~~~ 148 (161)
||+.++. ....+..++.. .+..+.++.+.+ +++...|+..+||... .++.+..+.+ ...|..+.++|+
T Consensus 346 ~d~~~~~~~~~~l~~~~~~--~l~~~~~~~~~l-v~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d 417 (741)
T 1yr2_A 346 VDLSGSTPRFDTVVPESKD--NLESVGIAGNRL-FASYIHDAKSQVLAFDLDGKPAGAVSLPGIGSASGLSGRPG 417 (741)
T ss_dssp EECSSSSCEEEEEECCCSS--EEEEEEEEBTEE-EEEEEETTEEEEEEEETTSCEEEECBCSSSCEEEEEECCBT
T ss_pred EeCCCCccccEEEecCCCC--eEEEEEEECCEE-EEEEEECCEEEEEEEeCCCCceeeccCCCCeEEEEeecCCC
Confidence 9987742 33345444432 355667775554 4444456666666543 4666677765 367888999886
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.05 E-value=9.1e-07 Score=71.08 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=54.3
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEeecCcce
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDV 97 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~ 97 (161)
++..+++++. ||.|+.||..+|+.+..++. +++.+.. .+++++.|| ++.||.++|+.+. .++.+....
T Consensus 8 ~~~~v~~gs~--dg~v~a~d~~tG~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w-~~~~~~~~~ 82 (369)
T 2hz6_A 8 PETLLFVSTL--DGSLHAVSKRTGSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLT-KLPFTIPEL 82 (369)
T ss_dssp CTTEEEEEET--TSEEEEEETTTCCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CCSE-ECSCCHHHH
T ss_pred eCCEEEEEcC--CCEEEEEECCCCCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCceee-eeeccCccc
Confidence 4445655554 89999999999999988886 4444332 667778899 9999999987542 333221100
Q ss_pred EEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe
Q psy505 98 CIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 98 ~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~ 136 (161)
...+..+..++. ++.++.|+.|..||.++|+.+-.+..
T Consensus 83 ~~~sp~~~~~~~-v~~g~~dg~v~a~D~~tG~~~w~~~~ 120 (369)
T 2hz6_A 83 VQASPCRSSDGI-LYMGKKQDIWYVIDLLTGEKQQTLSS 120 (369)
T ss_dssp HTTCSCC------CCCCEEEEEEEEECCC----------
T ss_pred cccCceEecCCE-EEEEeCCCEEEEEECCCCcEEEEecC
Confidence 000111112333 33344567899999999998766654
|
| >2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.04 E-value=6.3e-07 Score=72.02 Aligned_cols=103 Identities=15% Similarity=0.087 Sum_probs=50.2
Q ss_pred CCceEEEEcCCCCcceEEEEEcCCCCceeeeeccC------ccceeee-eEEEecCCc-eEEEEeCCcCceeeEEeecCc
Q psy505 24 SDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD------SPLAALA-SLSVGTKSG-YRLFSLNSIDTLEQIYENSQE 95 (161)
Q Consensus 24 ~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~------~~V~~l~-~lasgs~dg-iriwd~~~~~~~~~~~~~~~~ 95 (161)
+++..++.++. ||.|+.||..+|+.+..++.+. .++..-. .+++|+.|| +..||.++|+.+. .+..+.
T Consensus 47 ~~g~~~v~~s~--dg~l~a~d~~tG~~~w~~~~~~~~~~~~sp~~~~~~~v~~g~~dg~v~a~D~~tG~~~w-~~~~~~- 122 (369)
T 2hz6_A 47 VEEPAFLPDPN--DGSLYTLGSKNNEGLTKLPFTIPELVQASPCRSSDGILYMGKKQDIWYVIDLLTGEKQQ-TLSSAF- 122 (369)
T ss_dssp ---CCEEECTT--TCCEEEC-----CCSEECSCCHHHHHTTCSCC-----CCCCEEEEEEEEECCC--------------
T ss_pred cCCCEEEEeCC--CCEEEEEECCCCceeeeeeccCccccccCceEecCCEEEEEeCCCEEEEEECCCCcEEE-EecCCC-
Confidence 46656665444 9999999999998877765442 2221111 677788888 9999999998653 222222
Q ss_pred ceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 96 DVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 96 ~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
. ..++|++-.++.++.|+.|+.||.++|+.+-++.
T Consensus 123 ~-----~~~~p~~~~v~~~~~dg~v~a~d~~tG~~~W~~~ 157 (369)
T 2hz6_A 123 A-----DSLSPSTSLLYLGRTEYTITMYDTKTRELRWNAT 157 (369)
T ss_dssp ---------------EEEEEEEEEEECCCSSSSSCCCEEE
T ss_pred c-----ccccccCCEEEEEecCCEEEEEECCCCCEEEeEe
Confidence 1 1234433334444457799999999998765554
|
| >2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=98.02 E-value=8.1e-05 Score=64.05 Aligned_cols=131 Identities=7% Similarity=-0.035 Sum_probs=81.9
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcc----eEEEEEcCCCCceeeeeccCccceeee-----eEEEecC---Cc-eEEEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIG----EVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTK---SG-YRLFS 79 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg----~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~---dg-iriwd 79 (161)
++..+.+++++|||.+|++.+. ++ .|.+||..+++ ...+..|...+.... +++++.. ++ +.+||
T Consensus 225 ~~~~~~~~~~SpDG~~l~~~~~--~~~~~~~l~~~~~~~~~-~~~l~~~~~~~~~~~~~~g~l~~~s~~~~~~~~l~~~d 301 (695)
T 2bkl_A 225 DPTTFLQSDLSRDGKYLFVYIL--RGWSENDVYWKRPGEKD-FRLLVKGVGAKYEVHAWKDRFYVLTDEGAPRQRVFEVD 301 (695)
T ss_dssp CTTCEEEEEECTTSCCEEEEEE--ETTTEEEEEEECTTCSS-CEEEEECSSCCEEEEEETTEEEEEECTTCTTCEEEEEB
T ss_pred CCEEEEEEEECCCCCEEEEEEe--CCCCceEEEEEcCCCCc-eEEeecCCCceEEEEecCCcEEEEECCCCCCCEEEEEe
Confidence 3445778889999999988765 44 67777766554 455555555444333 3444442 45 99999
Q ss_pred eCCcCc--eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecC-CCCeEEEEEe--cCceEEEEECCc
Q psy505 80 LNSIDT--LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK-RGSEICNYSF--SNTILAVKLNRK 148 (161)
Q Consensus 80 ~~~~~~--~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~-~~~~i~~l~~--~~~V~~v~~~~~ 148 (161)
+.+++. ...+..++. ...+..++|+.+. .+++...|+..+||... +++.+..+.+ ...|..+.++|+
T Consensus 302 ~~~~~~~~~~~l~~~~~-~~~l~~~~~~~~~-lv~~~~~dg~~~l~~~~~~g~~~~~l~~~~~~~v~~~~~s~d 373 (695)
T 2bkl_A 302 PAKPARASWKEIVPEDS-SASLLSVSIVGGH-LSLEYLKDATSEVRVATLKGKPVRTVQLPGVGAASNLMGLED 373 (695)
T ss_dssp TTBCSGGGCEEEECCCS-SCEEEEEEEETTE-EEEEEEETTEEEEEEEETTCCEEEECCCSSSSEECCCBSCTT
T ss_pred CCCCCccCCeEEecCCC-CCeEEEEEEECCE-EEEEEEECCEEEEEEEeCCCCeeEEecCCCCeEEEEeecCCC
Confidence 987653 234443331 2346677787554 45555567777777554 4666666665 356788888886
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=98.01 E-value=0.0014 Score=50.74 Aligned_cols=132 Identities=8% Similarity=-0.032 Sum_probs=86.2
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCc-eEEEEeCCcCceeeEEee
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSLNSIDTLEQIYEN 92 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~~~~~~~~ 92 (161)
.++++.+ .|..+... ++.+.++|..+++.+.++..-...=+.++ ++++- .++ +.++|.++.+....+.-+
T Consensus 70 Gi~~~g~--~lyv~t~~-~~~v~viD~~t~~v~~~i~~g~~~g~glt~Dg~~l~vs~-gs~~l~viD~~t~~v~~~I~Vg 145 (266)
T 2iwa_A 70 GLTLLNE--KLYQVVWL-KNIGFIYDRRTLSNIKNFTHQMKDGWGLATDGKILYGSD-GTSILYEIDPHTFKLIKKHNVK 145 (266)
T ss_dssp EEEEETT--EEEEEETT-CSEEEEEETTTTEEEEEEECCSSSCCEEEECSSSEEEEC-SSSEEEEECTTTCCEEEEEECE
T ss_pred EEEEeCC--EEEEEEec-CCEEEEEECCCCcEEEEEECCCCCeEEEEECCCEEEEEC-CCCeEEEEECCCCcEEEEEEEC
Confidence 4555433 33333343 89999999999999998863312224455 44433 455 999999887655444333
Q ss_pred cC-cce-EEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec--------------CceEEEEECCc--EEEEEe
Q psy505 93 SQ-EDV-CIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS--------------NTILAVKLNRK--KEEEED 154 (161)
Q Consensus 93 ~~-~~~-~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~--------------~~V~~v~~~~~--~~vv~~ 154 (161)
.. .++ ...++.|. ++...+....++.|.+-|.++++.+..+... ....+++|+|+ ++.|..
T Consensus 146 ~~~~p~~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfVTg 224 (266)
T 2iwa_A 146 YNGHRVIRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFVTG 224 (266)
T ss_dssp ETTEECCCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEEEE
T ss_pred CCCcccccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEEEC
Confidence 21 111 24577777 5555566555679999999999999998763 24588999986 666665
Q ss_pred c
Q psy505 155 E 155 (161)
Q Consensus 155 ~ 155 (161)
+
T Consensus 225 k 225 (266)
T 2iwa_A 225 K 225 (266)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=98.00 E-value=9.7e-05 Score=58.16 Aligned_cols=117 Identities=5% Similarity=-0.073 Sum_probs=70.0
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeee-------eccCccceeee------eEEEecC-----Cc-eE
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMI-------PAHDSPLAALA------SLSVGTK-----SG-YR 76 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l-------~~H~~~V~~l~------~lasgs~-----dg-ir 76 (161)
....++++|+|.++++.....+|.++||.+.+++. ..+ .+|-..+.+++ ++++-+. ++ |.
T Consensus 18 ~p~~va~~~~g~~~v~~~~~~~~~~~l~~~~~g~~-~~~p~~~~~~~~~~~~p~gv~~d~~g~L~v~D~g~~~~~~~~i~ 96 (343)
T 2qe8_A 18 APGNITLTPDGRLFLSLHQFYQPEMQVAELTQDGL-IPFPPQSGNAIITFDTVLGIKSDGNGIVWMLDNGNQSKSVPKLV 96 (343)
T ss_dssp CEEEEEECTTSCEEEEECGGGCCSCSEEEEETTEE-EESCCCCSSCCCCCSCEEEEEECSSSEEEEEECHHHHTSCCEEE
T ss_pred CcceEEECCCCCEEEEeCCCCCCceEEEEECCCCe-ecCCCcccCcccceeEeeEEEEcCCCcEEEEcCCCCcCCCCeEE
Confidence 45677788899888774321134477777765542 222 23445566666 3333322 34 99
Q ss_pred EEEeCCcCceeeEEeecC----cceEEEEEeecC-CeEEEEecC---CCCeEEEEecCCCCeEEEE
Q psy505 77 LFSLNSIDTLEQIYENSQ----EDVCIVERLFSS-SLVAVVSLS---SPRKLTVCHFKRGSEICNY 134 (161)
Q Consensus 77 iwd~~~~~~~~~~~~~~~----~~~~v~~~~fs~-~~~~~~s~~---~d~~i~iWD~~~~~~i~~l 134 (161)
+||+.+++.+ +.+.... .......+++++ ++.+.++.. .++.|.+||..+++....+
T Consensus 97 ~~d~~tg~~~-~~~~~~~~~~~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~ 161 (343)
T 2qe8_A 97 AWDTLNNQLS-RVIYLPPPITLSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGLAARVL 161 (343)
T ss_dssp EEETTTTEEE-EEEECCTTTSCTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCCEEEEC
T ss_pred EEECCCCeEE-EEEECChhhcccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCCEEEEe
Confidence 9999887644 3333211 112345778886 456666655 5779999999988765544
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=98.00 E-value=0.00073 Score=54.88 Aligned_cols=139 Identities=6% Similarity=-0.061 Sum_probs=86.4
Q ss_pred eeEEeecCC-CceEEEEcCCCCcceEEEEEcCCCCceee----eeccCcc--ceeee-------eEEEecCCc-eEEEEe
Q psy505 16 GICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTM----IPAHDSP--LAALA-------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 16 ~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~----l~~H~~~--V~~l~-------~lasgs~dg-iriwd~ 80 (161)
....++++| +|.+++ +.. ++.|+.||+.++..... ..++... .+.++ ++++-+.++ |+.||.
T Consensus 220 ~p~~iav~p~~g~lyv-~d~--~~~I~~~d~~~~~~~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~ 296 (409)
T 3hrp_A 220 KIGAVALDETEEWLYF-VDS--NKNFGRFNVKTQEVTLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITP 296 (409)
T ss_dssp CCCBCEECTTSSEEEE-ECT--TCEEEEEETTTCCEEEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECT
T ss_pred CcEEEEEeCCCCeEEE-EEC--CCcEEEEECCCCCEEEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEec
Confidence 445677788 666555 333 78999999988764322 2222222 22555 555566666 999987
Q ss_pred CCcCceeeEEeecC------c-------ceEEEEEeecCCeEEEEecC-CCCeEEEEecCCCCeEEEEEec---------
Q psy505 81 NSIDTLEQIYENSQ------E-------DVCIVERLFSSSLVAVVSLS-SPRKLTVCHFKRGSEICNYSFS--------- 137 (161)
Q Consensus 81 ~~~~~~~~~~~~~~------~-------~~~v~~~~fs~~~~~~~s~~-~d~~i~iWD~~~~~~i~~l~~~--------- 137 (161)
.. . . ..+.++. + -..-..++++|++...++.+ ..+.|+.||..+|+. ..+...
T Consensus 297 ~g-~-~-~~~~g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~G~v-~~~~g~~~~~g~~~g 372 (409)
T 3hrp_A 297 DG-E-C-EWFCGSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILDGYV-STVAGQVDVASQIDG 372 (409)
T ss_dssp TC-C-E-EEEEECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTTTEE-EEEEECTTCBSCCCB
T ss_pred CC-C-E-EEEEeCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCCCEE-EEEeCCCCCCCcCCC
Confidence 53 3 2 2333331 0 01145788999887777777 788999999888864 333321
Q ss_pred -------CceEEEEECCc-EEEEEec--cceeeC
Q psy505 138 -------NTILAVKLNRK-KEEEEDE--EEEKKI 161 (161)
Q Consensus 138 -------~~V~~v~~~~~-~~vv~~~--~~~~~~ 161 (161)
....+++++++ .+.|+.. ++|+||
T Consensus 373 ~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i 406 (409)
T 3hrp_A 373 TPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKY 406 (409)
T ss_dssp STTTCCBSSEEEEEECSSSEEEEEESTTCEEEEE
T ss_pred ChhceEeCCceEEEEcCCCCEEEEECCCCeEEEE
Confidence 46889999996 4555543 367664
|
| >2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii} | Back alignment and structure |
|---|
Probab=97.97 E-value=0.0015 Score=48.97 Aligned_cols=138 Identities=9% Similarity=-0.047 Sum_probs=86.2
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee-eeeccCccceeee------eEEEecCCc-eEEEEeCCcCce
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT-MIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~-~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~ 86 (161)
..+..++++|+|.+.++... ++.|..+|.. ++... .+......+.+++ ++++...++ |..||. +++..
T Consensus 104 ~~~~~i~~~~~g~l~v~~~~--~~~i~~~~~~-g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~ 179 (300)
T 2qc5_A 104 SGPYGITEGLNGDIWFTQLN--GDRIGKLTAD-GTIYEYDLPNKGSYPAFITLGSDNALWFTENQNNSIGRITN-TGKLE 179 (300)
T ss_dssp CCEEEEEECSTTCEEEEETT--TTEEEEECTT-SCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE
T ss_pred CCCccceECCCCCEEEEccC--CCeEEEECCC-CCEEEccCCCCCCCceeEEECCCCCEEEEecCCCeEEEECC-CCcEE
Confidence 45778888888887776544 6789999987 55432 2333345566666 444444455 999998 55432
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe---cCceEEEEECCc-EEEEEe--ccceee
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF---SNTILAVKLNRK-KEEEED--EEEEKK 160 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~---~~~V~~v~~~~~-~~vv~~--~~~~~~ 160 (161)
. +...........+++++++...++....+.|.+||. +++.. .+.. ...+.++.++++ .+.++. .+.|.+
T Consensus 180 -~-~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~-~g~~~-~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~ 255 (300)
T 2qc5_A 180 -E-YPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITT-TGEIS-EYDIPTPNARPHAITAGKNSEIWFTEWGANQIGR 255 (300)
T ss_dssp -E-EECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCCEE-EEECSSTTCCEEEEEECSTTCEEEEETTTTEEEE
T ss_pred -E-eeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcC-CCcEE-EEECCCCCCCceEEEECCCCCEEEeccCCCeEEE
Confidence 2 221111123567888887765665555668999998 56543 3322 356889999887 565655 355654
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.97 E-value=0.0025 Score=49.31 Aligned_cols=132 Identities=9% Similarity=0.026 Sum_probs=85.6
Q ss_pred eecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCceEEEEeCCcCceeeEEeecC
Q psy505 20 LCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSGYRLFSLNSIDTLEQIYENSQ 94 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dgiriwd~~~~~~~~~~~~~~~ 94 (161)
+++..+..+++ ... ++.+.++|..+++.+.+|..... =+.++ ++.|-..+.+.++|.++.+.+..+.-+..
T Consensus 92 it~~g~~ly~l--tw~-~~~v~v~D~~t~~~~~ti~~~~e-G~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~ 167 (262)
T 3nol_A 92 ISDWKDKIVGL--TWK-NGLGFVWNIRNLRQVRSFNYDGE-GWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAH 167 (262)
T ss_dssp EEEETTEEEEE--ESS-SSEEEEEETTTCCEEEEEECSSC-CCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEET
T ss_pred EEEeCCEEEEE--Eee-CCEEEEEECccCcEEEEEECCCC-ceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccC
Confidence 44444444444 332 89999999999999999985332 24555 33333333399999988775543322211
Q ss_pred -cc-eEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec-------------CceEEEEECCc--EEEEEecc
Q psy505 95 -ED-VCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS-------------NTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 95 -~~-~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~-------------~~V~~v~~~~~--~~vv~~~~ 156 (161)
.+ ....++.|. ++...+....++.|.+-|.++|+.+..+..+ +.-++++|+|+ ++.|..+.
T Consensus 168 g~~~~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfVTGK~ 245 (262)
T 3nol_A 168 GEELPELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFVTGKL 245 (262)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEEEETT
T ss_pred CccccccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEEECCC
Confidence 11 123456676 4555566556779999999999999998763 13467999984 77777665
|
| >2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A* | Back alignment and structure |
|---|
Probab=97.97 E-value=0.0031 Score=48.76 Aligned_cols=145 Identities=9% Similarity=-0.017 Sum_probs=86.4
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCc-cceeee-----eEEEecCCc-
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS-PLAALA-----SLSVGTKSG- 74 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~-~V~~l~-----~lasgs~dg- 74 (161)
+.+.+++ ..+. .....++++||+...+++|...++.|++.|+.+++.+..+.-... ....++ +..+.-.++
T Consensus 10 ~vv~~~p-~~~~-~f~~Gl~~~~dg~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~~~fgeGi~~~g~~lyv~t~~~~~ 87 (266)
T 2iwa_A 10 EVLNEFP-HDPY-AFTQGLVYAENDTLFESTGLYGRSSVRQVALQTGKVENIHKMDDSYFGEGLTLLNEKLYQVVWLKNI 87 (266)
T ss_dssp EEEEEEE-CCTT-CCEEEEEECSTTEEEEEECSTTTCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEETTCSE
T ss_pred eEEEEEE-CCCC-CCcccEEEeCCCeEEEECCCCCCCEEEEEECCCCCEEEEEecCCCcceEEEEEeCCEEEEEEecCCE
Confidence 4566773 2222 123456678888777776632257899999999998888752221 112333 333444556
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec------CceEEEEECCc
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS------NTILAVKLNRK 148 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~------~~V~~v~~~~~ 148 (161)
+-++|.++.+.+.++--+...+ ..+++....++ +|. .+++|.+.|.++.+.+..+.-. ...+.+.|...
T Consensus 88 v~viD~~t~~v~~~i~~g~~~g---~glt~Dg~~l~-vs~-gs~~l~viD~~t~~v~~~I~Vg~~~~p~~~~nele~~dg 162 (266)
T 2iwa_A 88 GFIYDRRTLSNIKNFTHQMKDG---WGLATDGKILY-GSD-GTSILYEIDPHTFKLIKKHNVKYNGHRVIRLNELEYING 162 (266)
T ss_dssp EEEEETTTTEEEEEEECCSSSC---CEEEECSSSEE-EEC-SSSEEEEECTTTCCEEEEEECEETTEECCCEEEEEEETT
T ss_pred EEEEECCCCcEEEEEECCCCCe---EEEEECCCEEE-EEC-CCCeEEEEECCCCcEEEEEEECCCCcccccceeEEEECC
Confidence 9999999887665443330111 23445555444 444 4679999999999988777521 13455666544
Q ss_pred EEEEE
Q psy505 149 KEEEE 153 (161)
Q Consensus 149 ~~vv~ 153 (161)
++.+.
T Consensus 163 ~lyvn 167 (266)
T 2iwa_A 163 EVWAN 167 (266)
T ss_dssp EEEEE
T ss_pred EEEEe
Confidence 44444
|
| >1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A* | Back alignment and structure |
|---|
Probab=97.96 E-value=0.00026 Score=60.27 Aligned_cols=127 Identities=13% Similarity=0.127 Sum_probs=81.0
Q ss_pred cceEEecCCCCCCceeEEeecC----CCceEEEEcCCCCcceEEEEEcCCCCceeeeecc----------Cc-cceeee-
Q psy505 2 KVLHTIRDTPPNPNGICCLCVN----SDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAH----------DS-PLAALA- 65 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~----~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H----------~~-~V~~l~- 65 (161)
+.+.++ ....+ -+.++++ |||+++.++... +++|.|+|..+.+.++++... .. .+..+.
T Consensus 231 ~~v~~i-~~G~~---P~~ia~s~~~~pDGk~l~v~n~~-~~~v~ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~ 305 (567)
T 1qks_A 231 TTVAEI-KIGSE---ARSIETSKMEGWEDKYAIAGAYW-PPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILA 305 (567)
T ss_dssp CEEEEE-ECCSE---EEEEEECCSTTCTTTEEEEEEEE-TTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEE
T ss_pred cEeEEE-ecCCC---CceeEEccccCCCCCEEEEEEcc-CCeEEEEECCCCcEEEEEeccccccccccccCCCceEEEEE
Confidence 345555 33333 4567778 699998887774 799999999999988887532 12 233333
Q ss_pred ------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEE-EecCCCCeEEEEecCCCCeEEEEE
Q psy505 66 ------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAV-VSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 66 ------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~-~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
++++-.++| |.++|..+.+.+....-... .....+.|+|++.++ ++...+++|.++|.++++.+..+.
T Consensus 306 s~~~~~~vv~~~~~g~v~~vd~~~~~~~~v~~i~~~--~~~~d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~~i~ 381 (567)
T 1qks_A 306 SHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISAE--RFLHDGGLDGSHRYFITAANARNKLVVIDTKEGKLVAIED 381 (567)
T ss_dssp CSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEECC--SSEEEEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEEE
T ss_pred cCCCCEEEEEecCCCeEEEEecCCCccceeeeeecc--ccccCceECCCCCEEEEEeCCCCeEEEEECCCCcEEEEEe
Confidence 444455667 88999866443321111111 123467799877544 334456789999999999876654
|
| >3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B | Back alignment and structure |
|---|
Probab=97.88 E-value=0.0022 Score=49.08 Aligned_cols=131 Identities=6% Similarity=-0.036 Sum_probs=76.2
Q ss_pred EeecCCC-ceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCceEEEEeCCcCceeeEEee
Q psy505 19 CLCVNSD-NCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSGYRLFSLNSIDTLEQIYEN 92 (161)
Q Consensus 19 ~~~~~~d-~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dgiriwd~~~~~~~~~~~~~ 92 (161)
+..++|+ +..+.+ ... ++.|..||..+++. ..+. +...+.+++ .|..+..++|.+||.++++ +..+...
T Consensus 17 gp~w~~~~~~l~~~-d~~-~~~i~~~d~~~~~~-~~~~-~~~~~~~i~~~~dG~l~v~~~~~l~~~d~~~g~-~~~~~~~ 91 (297)
T 3g4e_A 17 SPVWEEVSNSLLFV-DIP-AKKVCRWDSFTKQV-QRVT-MDAPVSSVALRQSGGYVATIGTKFCALNWKEQS-AVVLATV 91 (297)
T ss_dssp EEEEETTTTEEEEE-ETT-TTEEEEEETTTCCE-EEEE-CSSCEEEEEEBTTSSEEEEETTEEEEEETTTTE-EEEEEEC
T ss_pred CCeEECCCCEEEEE-ECC-CCEEEEEECCCCcE-EEEe-CCCceEEEEECCCCCEEEEECCeEEEEECCCCc-EEEEEec
Confidence 4555664 444444 443 78999999998765 3333 345677777 3333456669999998765 3233322
Q ss_pred cC--cceEEEEEeecCCeEEEEecCC---------CCeEEEEecCC-CCeEEEEEecCceEEEEECCcE--EEEEe
Q psy505 93 SQ--EDVCIVERLFSSSLVAVVSLSS---------PRKLTVCHFKR-GSEICNYSFSNTILAVKLNRKK--EEEED 154 (161)
Q Consensus 93 ~~--~~~~v~~~~fs~~~~~~~s~~~---------d~~i~iWD~~~-~~~i~~l~~~~~V~~v~~~~~~--~vv~~ 154 (161)
.. .......++++|++...++... ...-.||.+.. ++............+++|+|+. +.++.
T Consensus 92 ~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~~~~~~~~pngi~~spdg~~lyv~~ 167 (297)
T 3g4e_A 92 DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKKYFDQVDISNGLDWSLDHKIFYYID 167 (297)
T ss_dssp CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEEEEEEESBEEEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEecCCcccccccccCCCcEEEEEECCCCEEEEeeccccccceEEcCCCCEEEEec
Confidence 11 2245678889998865554311 12345555443 4433323334567889999973 55544
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.86 E-value=0.001 Score=51.92 Aligned_cols=131 Identities=8% Similarity=-0.128 Sum_probs=76.6
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCceEEEEeCCcCceeeEEee
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSGYRLFSLNSIDTLEQIYEN 92 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dgiriwd~~~~~~~~~~~~~ 92 (161)
...+++|++..+...+.. ++.|..||..+++.. .+. +...+.+++ .+..++.+|+.+||.++++. ..+...
T Consensus 52 egp~~~~~~~~l~~~d~~-~~~i~~~d~~~~~~~-~~~-~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~-~~~~~~ 127 (326)
T 2ghs_A 52 EGPTFDPASGTAWWFNIL-ERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIASDDGLFLRDTATGVL-TLHAEL 127 (326)
T ss_dssp EEEEEETTTTEEEEEEGG-GTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEETTEEEEEETTTCCE-EEEECS
T ss_pred cCCeEeCCCCEEEEEECC-CCEEEEEECCCCcEE-EEE-CCCcceEEEEeCCCeEEEEECCCEEEEECCCCcE-EEEeeC
Confidence 355667764444444442 789999999887542 333 345677776 33334567799999988763 223221
Q ss_pred c--CcceEEEEEeecCCeEEEEecCC------CCeEEEEecCCCCeEEEEEecCceEEEEECCcE--EEEEe
Q psy505 93 S--QEDVCIVERLFSSSLVAVVSLSS------PRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK--EEEED 154 (161)
Q Consensus 93 ~--~~~~~v~~~~fs~~~~~~~s~~~------d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~--~vv~~ 154 (161)
. .....+..++++|++...++... .+.|..+| +++............+++|+|++ +.++.
T Consensus 128 ~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~~~~~~~~~~~~~i~~s~dg~~lyv~~ 197 (326)
T 2ghs_A 128 ESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKVTKLFADISIPNSICFSPDGTTGYFVD 197 (326)
T ss_dssp STTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEEEEEEEEESSEEEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcEEEeeCCCcccCCeEEcCCCCEEEEEE
Confidence 1 11245778899998765555321 23455555 45533222233567789999884 55543
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.0036 Score=48.56 Aligned_cols=132 Identities=8% Similarity=-0.002 Sum_probs=86.3
Q ss_pred eecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCceeeEEeecC
Q psy505 20 LCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQ 94 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~~~~~~~~~ 94 (161)
+++..+..+++. .. ++.+.++|..+++.+.+|..-. .=++++ .|..+..++ +.++|.++.+.+..+.-+..
T Consensus 101 it~~g~~Ly~lt--w~-~~~v~V~D~~Tl~~~~ti~~~~-eGwGLt~Dg~~L~vSdGs~~l~~iDp~T~~v~~~I~V~~~ 176 (268)
T 3nok_A 101 LASDGERLYQLT--WT-EGLLFTWSGMPPQRERTTRYSG-EGWGLCYWNGKLVRSDGGTMLTFHEPDGFALVGAVQVKLR 176 (268)
T ss_dssp EEECSSCEEEEE--SS-SCEEEEEETTTTEEEEEEECSS-CCCCEEEETTEEEEECSSSEEEEECTTTCCEEEEEECEET
T ss_pred EEEeCCEEEEEE--cc-CCEEEEEECCcCcEEEEEeCCC-ceeEEecCCCEEEEECCCCEEEEEcCCCCeEEEEEEeCCC
Confidence 455545444443 32 8999999999999999998533 235666 333333344 99999988775543322211
Q ss_pred -cce-EEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec--------------CceEEEEECCc--EEEEEecc
Q psy505 95 -EDV-CIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS--------------NTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 95 -~~~-~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~--------------~~V~~v~~~~~--~~vv~~~~ 156 (161)
.++ ...++.|. ++...+....++.|.+-|.++|+.+..+.+. +.-++++++|+ ++.|..+.
T Consensus 177 g~~v~~lNeLe~~-dG~lyanvw~s~~I~vIDp~TG~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~dp~~~rlfVTGK~ 255 (268)
T 3nok_A 177 GQPVELINELECA-NGVIYANIWHSSDVLEIDPATGTVVGVIDASALTRAVAGQVTNPEAVLNGIAVEPGSGRIFMTGKL 255 (268)
T ss_dssp TEECCCEEEEEEE-TTEEEEEETTCSEEEEECTTTCBEEEEEECHHHHHHHTTTCCCTTCCEEEEEECTTTCCEEEEETT
T ss_pred CcccccccccEEe-CCEEEEEECCCCeEEEEeCCCCcEEEEEECCCCcccccccccCcCCceEEEEEcCCCCEEEEeCCC
Confidence 111 34567777 4455566556679999999999999998753 23467999984 66665554
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00044 Score=56.35 Aligned_cols=116 Identities=7% Similarity=-0.023 Sum_probs=75.6
Q ss_pred EeecCCCceEEEEcCCC---CcceEEEEEcCCCCceeeeeccCccceeee------eEEEec----------CCc-eEEE
Q psy505 19 CLCVNSDNCYLAYPGSN---SIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGT----------KSG-YRLF 78 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~---~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs----------~dg-iriw 78 (161)
...+.||+..+-.+... .++.|.+.|..+++.+.++..-..+ . ++ .+.+++ .++ |.+|
T Consensus 37 ~~~~~pd~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~vG~~P-~-va~spDG~~lyVan~~~~r~~~G~~~~~Vsvi 114 (386)
T 3sjl_D 37 LEAPAPDARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDGGFLP-N-PVVADDGSFIAHASTVFSRIARGERTDYVEVF 114 (386)
T ss_dssp CCCCCCCTTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEECSSC-E-EEECTTSSCEEEEEEEEEETTEEEEEEEEEEE
T ss_pred eeccCCCCCEEEEEcCcccCCCCEEEEEECCCCeEEEEEECCCCC-c-EEECCCCCEEEEEcccccccccCCCCCEEEEE
Confidence 45667888666554330 0579999999999999999865566 3 55 332222 345 9999
Q ss_pred EeCCcCceeeEEeecCc----ceEEEEEeecCCeEEE-EecC-CCCeEEEEecCCCCeEEEEEe
Q psy505 79 SLNSIDTLEQIYENSQE----DVCIVERLFSSSLVAV-VSLS-SPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 79 d~~~~~~~~~~~~~~~~----~~~v~~~~fs~~~~~~-~s~~-~d~~i~iWD~~~~~~i~~l~~ 136 (161)
|..+.+...++.-+... ...-..++|+|++..+ ++.. .+++|.++|+++++.+.++.-
T Consensus 115 D~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t~~vv~tI~v 178 (386)
T 3sjl_D 115 DPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 178 (386)
T ss_dssp CTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred ECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCCCcEEEEEEC
Confidence 99998766544322100 0011257799987543 3433 368999999999999888854
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.83 E-value=0.0036 Score=50.21 Aligned_cols=37 Identities=11% Similarity=0.081 Sum_probs=30.6
Q ss_pred CeEEEEecCCCCeEEEEEecCceEEEEECCc-E-EEEEe
Q psy505 118 RKLTVCHFKRGSEICNYSFSNTILAVKLNRK-K-EEEED 154 (161)
Q Consensus 118 ~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~-~-~vv~~ 154 (161)
+.|.+.|.++++.+.++.......++.|+|| + ++++.
T Consensus 298 ~~V~VID~~t~~vv~~i~~g~~p~~i~~s~Dg~~~l~v~ 336 (373)
T 2mad_H 298 KEVTSVTGLVGQTSSQISLGHDVDAISVAQDGGPDLYAL 336 (373)
T ss_pred CeEEEEECCCCEEEEEEECCCCcCeEEECCCCCeEEEEE
Confidence 5799999999999999987778999999998 2 44444
|
| >2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00023 Score=55.95 Aligned_cols=138 Identities=8% Similarity=-0.086 Sum_probs=77.7
Q ss_pred eeEEeecCCC-ceEEEEcCC--CCcceEEEEEcCCCCceeeeeccCc-----------------------------ccee
Q psy505 16 GICCLCVNSD-NCYLAYPGS--NSIGEVQIFDADNLHAKTMIPAHDS-----------------------------PLAA 63 (161)
Q Consensus 16 ~v~~~~~~~d-~~~la~~g~--~~dg~v~iWd~~~~~~~~~l~~H~~-----------------------------~V~~ 63 (161)
....++++|+ +...++-.+ . ++.|.+||+.+++....+.+|.. .+++
T Consensus 121 ~~~~v~vd~~~g~~yvtd~~~~~-~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~g 199 (343)
T 2qe8_A 121 FVNDLAVDLIHNFVYISDPAPDD-KAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVNG 199 (343)
T ss_dssp CCCEEEEETTTTEEEEEECCSGG-GCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEEE
T ss_pred ccceEEEecCCCEEEEEcCccCC-CCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccce
Confidence 3456777764 444454331 2 68999999998887766665422 1233
Q ss_pred ee------eEEEecCCceEEEEeCCcC----c------eee-EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecC
Q psy505 64 LA------SLSVGTKSGYRLFSLNSID----T------LEQ-IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK 126 (161)
Q Consensus 64 l~------~lasgs~dgiriwd~~~~~----~------~~~-~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~ 126 (161)
++ .|..+..++-+||.+.+.. . ... ...++.+ ....+++++++...++...++.|.+||.+
T Consensus 200 ia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~g~~g--~pdgia~d~~G~l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 200 IVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERYSEKP--ICDGISIDKDHNIYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEEEECC--SCSCEEECTTCCEEEEEGGGTEEEEEETT
T ss_pred eEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEecccCC--CCceEEECCCCCEEEEccCCCeEEEEECC
Confidence 43 3444444443555543210 0 000 0112211 12357788888777877778899999996
Q ss_pred CCCeEEEEEec--CceEEEEECCcEEEEEecc
Q psy505 127 RGSEICNYSFS--NTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 127 ~~~~i~~l~~~--~~V~~v~~~~~~~vv~~~~ 156 (161)
+|+.......+ ..+.+++|.+++-+.++.+
T Consensus 278 ~G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~ 309 (343)
T 2qe8_A 278 DRAYKLLVTDEKLSWTDSFNFGSDGYLYFDCN 309 (343)
T ss_dssp TTEEEEEEECGGGSCEEEEEECTTSCEEEEEC
T ss_pred CCCEEEEEECCceecCCeeEECCCCcEEEEeC
Confidence 67643333332 4688999988754444433
|
| >3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.0049 Score=47.80 Aligned_cols=108 Identities=12% Similarity=0.008 Sum_probs=67.6
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCcc-ceeee-----eEEEecCCc-eEEEEeCCcCceeeEE
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSP-LAALA-----SLSVGTKSG-YRLFSLNSIDTLEQIY 90 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~-V~~l~-----~lasgs~dg-iriwd~~~~~~~~~~~ 90 (161)
..|.++ ++....+.|. +|.|+..|+.+++.+..+ -.... -.+++ ++...-.++ +.+||.++.+.+.++
T Consensus 58 qGL~~~-~~~Ly~stG~--~g~v~~iD~~Tgkv~~~~-l~~~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~~~~ti- 132 (268)
T 3nok_A 58 QGLVFH-QGHFFESTGH--QGTLRQLSLESAQPVWME-RLGNIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQRERTT- 132 (268)
T ss_dssp EEEEEE-TTEEEEEETT--TTEEEECCSSCSSCSEEE-ECTTCCEEEEEECSSCEEEEESSSCEEEEEETTTTEEEEEE-
T ss_pred ceEEEE-CCEEEEEcCC--CCEEEEEECCCCcEEeEE-CCCCcceeEEEEeCCEEEEEEccCCEEEEEECCcCcEEEEE-
Confidence 355555 3556666665 788999999999988776 22221 12344 333333555 999999988766443
Q ss_pred eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 91 ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 91 ~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
.....+ ..+++....++ +|. .+++|.++|.++.+.+.++.
T Consensus 133 ~~~~eG---wGLt~Dg~~L~-vSd-Gs~~l~~iDp~T~~v~~~I~ 172 (268)
T 3nok_A 133 RYSGEG---WGLCYWNGKLV-RSD-GGTMLTFHEPDGFALVGAVQ 172 (268)
T ss_dssp ECSSCC---CCEEEETTEEE-EEC-SSSEEEEECTTTCCEEEEEE
T ss_pred eCCCce---eEEecCCCEEE-EEC-CCCEEEEEcCCCCeEEEEEE
Confidence 321111 23445554443 443 36799999999998887764
|
| >2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1 | Back alignment and structure |
|---|
Probab=97.79 E-value=0.0025 Score=49.66 Aligned_cols=137 Identities=9% Similarity=-0.029 Sum_probs=80.2
Q ss_pred ceeEEeecCCCceEEEEcCCC----CcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeC-
Q psy505 15 NGICCLCVNSDNCYLAYPGSN----SIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLN- 81 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~----~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~- 81 (161)
..+..++++|+|.+.++.... ..+.|..+| +++. ..+..+....++++ ++++.+.++ |.+||..
T Consensus 134 ~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~g~~-~~~~~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~ 210 (326)
T 2ghs_A 134 NRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--KGKV-TKLFADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDA 210 (326)
T ss_dssp EEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--TTEE-EEEEEEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCT
T ss_pred CCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--CCcE-EEeeCCCcccCCeEEcCCCCEEEEEECCCCEEEEEEccc
Confidence 357788899999877654210 013444455 4543 33333333345554 334555566 9999986
Q ss_pred -Cc-Cce-eeEEe-ecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec-CceEEEEEC-Cc--EEEEE
Q psy505 82 -SI-DTL-EQIYE-NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS-NTILAVKLN-RK--KEEEE 153 (161)
Q Consensus 82 -~~-~~~-~~~~~-~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~-~~V~~v~~~-~~--~~vv~ 153 (161)
+| ... .+.+. .....-....+++++++...++...++.|.+||. +++.+..+..+ ..+.+++|+ |+ .|.+.
T Consensus 211 ~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~lwva~~~~~~v~~~d~-~g~~~~~i~~~~~~~~~~af~g~d~~~L~vt 289 (326)
T 2ghs_A 211 RTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVT 289 (326)
T ss_dssp TTCCBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEE
T ss_pred ccCCcccCceEEEECCCCCCCCCeeEECCCCCEEEEEeCCCEEEEECC-CCCEEEEEECCCCCcEEEEEecCCCCEEEEE
Confidence 55 311 01221 1111113457788887765555444568999998 68877777754 479999997 75 46555
Q ss_pred ec
Q psy505 154 DE 155 (161)
Q Consensus 154 ~~ 155 (161)
..
T Consensus 290 ~~ 291 (326)
T 2ghs_A 290 SA 291 (326)
T ss_dssp EB
T ss_pred ec
Confidence 43
|
| >3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482} | Back alignment and structure |
|---|
Probab=97.77 E-value=0.0011 Score=53.86 Aligned_cols=135 Identities=12% Similarity=-0.004 Sum_probs=82.6
Q ss_pred eecCCCceEEEEcCCCCcc--eEEEEEcCCCCceeee----eccCccceeee------eEEEecCCc-eEEEEeCCcCce
Q psy505 20 LCVNSDNCYLAYPGSNSIG--EVQIFDADNLHAKTMI----PAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg--~v~iWd~~~~~~~~~l----~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~ 86 (161)
++++|++..|..+.. ++ .|.+||..++.....+ ..+...+++++ .|..+..++ |+.||..++. .
T Consensus 176 ia~~~~g~~l~~~d~--~~~~~I~~~d~~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~lyv~d~~~~I~~~d~~~~~-~ 252 (409)
T 3hrp_A 176 PAVTKDKQRVYSIGW--EGTHTVYVYMKASGWAPTRIGQLGSTFSGKIGAVALDETEEWLYFVDSNKNFGRFNVKTQE-V 252 (409)
T ss_dssp CEECTTSSEEEEEBS--STTCEEEEEEGGGTTCEEEEEECCTTSCSCCCBCEECTTSSEEEEECTTCEEEEEETTTCC-E
T ss_pred eeEecCCCcEEEEec--CCCceEEEEEcCCCceeEEeeeccchhcCCcEEEEEeCCCCeEEEEECCCcEEEEECCCCC-E
Confidence 677888877766554 34 7999998876654444 21445566666 333355577 9999998764 2
Q ss_pred eeEEe-----ecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEEE-ec---------------CceEEEE
Q psy505 87 EQIYE-----NSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNYS-FS---------------NTILAVK 144 (161)
Q Consensus 87 ~~~~~-----~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~---------------~~V~~v~ 144 (161)
..+. ++........++|+| ++...++....+.|+.||... + +..+. .. ....+++
T Consensus 253 -~~~~~~~~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~~~~~~g-~-~~~~~g~~~~~g~~dg~~~~~~~~~P~gia 329 (409)
T 3hrp_A 253 -TLIKQLELSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVYKITPDG-E-CEWFCGSATQKTVQDGLREEALFAQPNGMT 329 (409)
T ss_dssp -EEEEECCCCSCCCCSSCCEEEEETTTTEEEEEETTTTEEEEECTTC-C-EEEEEECTTCCSCBCEEGGGCBCSSEEEEE
T ss_pred -EEEecccccCCCCCCccccEEEeCCCCEEEEEeCCCCEEEEEecCC-C-EEEEEeCCCCCCcCCCcccccEeCCCeEEE
Confidence 2331 111110011788998 577777777788999999764 3 23332 11 3478899
Q ss_pred ECCcE-EEEEec---cceee
Q psy505 145 LNRKK-EEEEDE---EEEKK 160 (161)
Q Consensus 145 ~~~~~-~vv~~~---~~~~~ 160 (161)
++|++ +.++.. .+|++
T Consensus 330 ~d~dG~lyvad~~~~~~I~~ 349 (409)
T 3hrp_A 330 VDEDGNFYIVDGFKGYCLRK 349 (409)
T ss_dssp ECTTCCEEEEETTTTCEEEE
T ss_pred EeCCCCEEEEeCCCCCEEEE
Confidence 99985 555543 35554
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.75 E-value=0.0011 Score=51.00 Aligned_cols=132 Identities=2% Similarity=-0.212 Sum_probs=81.3
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEE
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIY 90 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~ 90 (161)
...+++|+|..|..++.. ++.|..||. +++ ...+..+...+++++ ++++...++ |.+||.. |+ +..+.
T Consensus 48 egp~~~~~g~~l~~~d~~-~~~i~~~~~-~g~-~~~~~~~~~~~~gl~~d~dG~l~v~~~~~~~v~~~~~~-g~-~~~~~ 122 (305)
T 3dr2_A 48 EGPAWWEAQRTLVWSDLV-GRRVLGWRE-DGT-VDVLLDATAFTNGNAVDAQQRLVHCEHGRRAITRSDAD-GQ-AHLLV 122 (305)
T ss_dssp EEEEEEGGGTEEEEEETT-TTEEEEEET-TSC-EEEEEESCSCEEEEEECTTSCEEEEETTTTEEEEECTT-SC-EEEEE
T ss_pred cCCeEeCCCCEEEEEECC-CCEEEEEeC-CCC-EEEEeCCCCccceeeECCCCCEEEEECCCCEEEEECCC-CC-EEEEE
Confidence 456667888855555553 789999998 454 455666667777777 444444444 9999975 54 32232
Q ss_pred eecCcc--eEEEEEeecCCeEEEEe----cC-------------CCCeEEEEecCCCCeEEEEEecCceEEEEECCc--E
Q psy505 91 ENSQED--VCIVERLFSSSLVAVVS----LS-------------SPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--K 149 (161)
Q Consensus 91 ~~~~~~--~~v~~~~fs~~~~~~~s----~~-------------~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~ 149 (161)
....+. .....++++|++...++ +. ..+.|..||.++++..... ......+++|+|+ .
T Consensus 123 ~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~-~~~~p~gl~~spdg~~ 201 (305)
T 3dr2_A 123 GRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA-DLDHPNGLAFSPDEQT 201 (305)
T ss_dssp CEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE-EESSEEEEEECTTSSE
T ss_pred eccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe-cCCCCcceEEcCCCCE
Confidence 211110 12346788888876664 21 1256888898777754433 3356678999998 3
Q ss_pred EEEEec
Q psy505 150 EEEEDE 155 (161)
Q Consensus 150 ~vv~~~ 155 (161)
+.++..
T Consensus 202 lyv~~~ 207 (305)
T 3dr2_A 202 LYVSQT 207 (305)
T ss_dssp EEEEEC
T ss_pred EEEEec
Confidence 666544
|
| >3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.001 Score=51.15 Aligned_cols=138 Identities=14% Similarity=-0.034 Sum_probs=82.9
Q ss_pred eEEeecCCCceEEEEc----CCC-----------CcceEEEEEcCCCCceeeeeccCccceeee------eEEEe-cC--
Q psy505 17 ICCLCVNSDNCYLAYP----GSN-----------SIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVG-TK-- 72 (161)
Q Consensus 17 v~~~~~~~d~~~la~~----g~~-----------~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasg-s~-- 72 (161)
+..++++|+|.+.++- ... ..+.|..+|..+++..... +....+.++ .|..+ +.
T Consensus 133 ~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~ 210 (305)
T 3dr2_A 133 PNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQ 210 (305)
T ss_dssp CCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC-
T ss_pred CCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCc
Confidence 3457778899888751 110 0256777888777654332 333345555 33333 33
Q ss_pred ---Cc-eEEEEeCCcCceee--EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEEC
Q psy505 73 ---SG-YRLFSLNSIDTLEQ--IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLN 146 (161)
Q Consensus 73 ---dg-iriwd~~~~~~~~~--~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~ 146 (161)
++ |.+||+..+. +.. .+.... .-....+++++++...++. .+.|.+||. .++.+..+..+..+.++.|+
T Consensus 211 ~~~~~~i~~~~~~~~~-l~~~~~~~~~~-~~~pdgi~~d~~G~lwv~~--~~gv~~~~~-~g~~~~~~~~~~~~~~~~f~ 285 (305)
T 3dr2_A 211 GHGSVEITAFAWRDGA-LHDRRHFASVP-DGLPDGFCVDRGGWLWSSS--GTGVCVFDS-DGQLLGHIPTPGTASNCTFD 285 (305)
T ss_dssp --CCCEEEEEEEETTE-EEEEEEEECCS-SSCCCSEEECTTSCEEECC--SSEEEEECT-TSCEEEEEECSSCCCEEEEC
T ss_pred CCCCCEEEEEEecCCC-ccCCeEEEECC-CCCCCeEEECCCCCEEEec--CCcEEEECC-CCCEEEEEECCCceeEEEEe
Confidence 25 9999986543 211 111000 0012246677777655654 246999998 58888888776789999997
Q ss_pred Cc--EEEEEeccceeeC
Q psy505 147 RK--KEEEEDEEEEKKI 161 (161)
Q Consensus 147 ~~--~~vv~~~~~~~~~ 161 (161)
|+ .|.+...+.++++
T Consensus 286 ~d~~~L~it~~~~l~~~ 302 (305)
T 3dr2_A 286 QAQQRLFITGGPCLWML 302 (305)
T ss_dssp TTSCEEEEEETTEEEEE
T ss_pred CCCCEEEEEcCCeEEEE
Confidence 75 6888888877653
|
| >3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0069 Score=46.80 Aligned_cols=123 Identities=8% Similarity=0.106 Sum_probs=73.4
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcc--eEEEEEcCCCCceeeeeccCccc-eeee-----eEEEecCC
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIG--EVQIFDADNLHAKTMIPAHDSPL-AALA-----SLSVGTKS 73 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg--~v~iWd~~~~~~~~~l~~H~~~V-~~l~-----~lasgs~d 73 (161)
+.+++++ ..+.+ =...|.++ |+....++|. +| .|+..|+.+++.+..+.-..... .+++ +....-.+
T Consensus 32 ~vv~~~p-hd~~~-ftqGL~~~-~~~LyestG~--~g~S~v~~vD~~Tgkv~~~~~l~~~~FgeGit~~g~~ly~ltw~~ 106 (262)
T 3nol_A 32 QIVHSYP-HDTKA-FTEGFFYR-NGYFYESTGL--NGRSSIRKVDIESGKTLQQIELGKRYFGEGISDWKDKIVGLTWKN 106 (262)
T ss_dssp EEEEEEE-CCTTC-EEEEEEEE-TTEEEEEEEE--TTEEEEEEECTTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSS
T ss_pred EEEEEec-CCCCc-ccceEEEE-CCEEEEECCC--CCCceEEEEECCCCcEEEEEecCCccceeEEEEeCCEEEEEEeeC
Confidence 3455663 22232 13455566 5667777665 45 89999999999888876433321 2233 33333345
Q ss_pred c-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 74 G-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 74 g-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
+ +-+||.++.+.+.++--+ ..+ ..+++....+ .+|. ..++|.++|.++.+.+..+.
T Consensus 107 ~~v~v~D~~t~~~~~ti~~~-~eG---~glt~dg~~L-~~Sd-Gs~~i~~iDp~T~~v~~~I~ 163 (262)
T 3nol_A 107 GLGFVWNIRNLRQVRSFNYD-GEG---WGLTHNDQYL-IMSD-GTPVLRFLDPESLTPVRTIT 163 (262)
T ss_dssp SEEEEEETTTCCEEEEEECS-SCC---CCEEECSSCE-EECC-SSSEEEEECTTTCSEEEEEE
T ss_pred CEEEEEECccCcEEEEEECC-CCc---eEEecCCCEE-EEEC-CCCeEEEEcCCCCeEEEEEE
Confidence 5 999999998766444322 111 1333444433 3443 35689999999988877764
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.011 Score=45.14 Aligned_cols=133 Identities=8% Similarity=0.031 Sum_probs=84.0
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCceEEEEeCCcCceeeEEeec
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSGYRLFSLNSIDTLEQIYENS 93 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dgiriwd~~~~~~~~~~~~~~ 93 (161)
.+++..+..+++ ... ++.+.++|..+.+.+.++...... ++++ ++.|-..+.+.++|.++.+.+..+--+.
T Consensus 69 Gi~~~~~~ly~l--tw~-~~~v~v~D~~tl~~~~ti~~~~~G-wglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~ 144 (243)
T 3mbr_X 69 GIVAWRDRLIQL--TWR-NHEGFVYDLATLTPRARFRYPGEG-WALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTA 144 (243)
T ss_dssp EEEEETTEEEEE--ESS-SSEEEEEETTTTEEEEEEECSSCC-CEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEE
T ss_pred EEEEeCCEEEEE--Eee-CCEEEEEECCcCcEEEEEeCCCCc-eEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEcc
Confidence 344443443444 342 899999999999999999854333 5666 4444333339999998876554332221
Q ss_pred C-cc-eEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec--------------CceEEEEECCc--EEEEEec
Q psy505 94 Q-ED-VCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS--------------NTILAVKLNRK--KEEEEDE 155 (161)
Q Consensus 94 ~-~~-~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~--------------~~V~~v~~~~~--~~vv~~~ 155 (161)
. .+ ..+.++.+.... ..+....++.|.+-|.++|+.+..+... +.-++++++|+ ++.|..+
T Consensus 145 ~g~~~~~lNeLe~~~G~-lyanvw~s~~I~vIDp~tG~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lfVTGK 223 (243)
T 3mbr_X 145 GGRPLDNLNELEWVNGE-LLANVWLTSRIARIDPASGKVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLFVTGK 223 (243)
T ss_dssp TTEECCCEEEEEEETTE-EEEEETTTTEEEEECTTTCBEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEEEEET
T ss_pred CCcccccceeeEEeCCE-EEEEECCCCeEEEEECCCCCEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEEEECC
Confidence 1 11 124566666444 4454445668999999999999988733 13467999984 7776655
Q ss_pred c
Q psy505 156 E 156 (161)
Q Consensus 156 ~ 156 (161)
.
T Consensus 224 ~ 224 (243)
T 3mbr_X 224 R 224 (243)
T ss_dssp T
T ss_pred C
Confidence 4
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0005 Score=57.21 Aligned_cols=124 Identities=10% Similarity=0.133 Sum_probs=78.2
Q ss_pred CCceEEEEcCCCCcceEEEEEcCCC----Cceeeee--------cc--Cccceeee--eEEEecCC------c-eEEEEe
Q psy505 24 SDNCYLAYPGSNSIGEVQIFDADNL----HAKTMIP--------AH--DSPLAALA--SLSVGTKS------G-YRLFSL 80 (161)
Q Consensus 24 ~d~~~la~~g~~~dg~v~iWd~~~~----~~~~~l~--------~H--~~~V~~l~--~lasgs~d------g-iriwd~ 80 (161)
+++++|..++.. ++.|.+.|+.+. +..++++ +- ...+.+.. +++++..+ | |-+.|.
T Consensus 93 ~~r~~l~v~~l~-s~~I~viD~~t~p~~p~~~k~ie~~~~~~~~g~s~Ph~~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~ 171 (462)
T 2ece_A 93 IERRFLIVPGLR-SSRIYIIDTKPNPREPKIIKVIEPEEVKKVSGYSRLHTVHCGPDAIYISALGNEEGEGPGGILMLDH 171 (462)
T ss_dssp CCSCEEEEEBTT-TCCEEEEECCSCTTSCEEEEEECHHHHHHHHCEEEEEEEEECSSCEEEEEEEETTSCSCCEEEEECT
T ss_pred ccCCEEEEccCC-CCeEEEEECCCCCCCceeeeeechhhcccccCCCcccceeECCCeEEEEcCCCcCCCCCCeEEEEEC
Confidence 788999998986 899999999765 4455552 10 00111221 33333333 4 999999
Q ss_pred CCcCceeeEEeecCcceEEEEEeecCCeEEEEecC-------------------CCCeEEEEecCCCCeEEEEEec---C
Q psy505 81 NSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLS-------------------SPRKLTVCHFKRGSEICNYSFS---N 138 (161)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~-------------------~d~~i~iWD~~~~~~i~~l~~~---~ 138 (161)
++++.+.+.-.+......-..+-|+|+...+++.. ..++|.+||+.+++.+.++... .
T Consensus 172 ~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~ 251 (462)
T 2ece_A 172 YSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENR 251 (462)
T ss_dssp TTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEE
T ss_pred CCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCC
Confidence 98875543322211111122456788776666642 2578999999999888888763 3
Q ss_pred ceEEEEE--CCc
Q psy505 139 TILAVKL--NRK 148 (161)
Q Consensus 139 ~V~~v~~--~~~ 148 (161)
..+.++| +|+
T Consensus 252 ~P~~i~f~~~Pd 263 (462)
T 2ece_A 252 MALELRPLHDPT 263 (462)
T ss_dssp EEEEEEECSSTT
T ss_pred ccceeEeeECCC
Confidence 5667777 887
|
| >2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H* | Back alignment and structure |
|---|
Probab=97.59 E-value=0.0037 Score=50.14 Aligned_cols=112 Identities=8% Similarity=-0.008 Sum_probs=69.6
Q ss_pred ecCCCceEEEEcCC-CCcc---eEEEEEcCCCCceeeeeccCccceeee------eEEEec----------CCc-eEEEE
Q psy505 21 CVNSDNCYLAYPGS-NSIG---EVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGT----------KSG-YRLFS 79 (161)
Q Consensus 21 ~~~~d~~~la~~g~-~~dg---~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs----------~dg-iriwd 79 (161)
.+.|++..+-.+.. . .. +|.++|..+++.+.++.....+ .++ ++..+. .++ |.+||
T Consensus 27 ~~~~~~~~~yv~~~~~-~~~~~~v~v~D~~t~~~~~~i~~g~~p--~i~~spDg~~lyv~n~~~~~~~rg~~~~~v~viD 103 (373)
T 2mad_H 27 APGADGRRSYINLPAH-HSAIIQQWVLDAGSGSILGHVNGGFLP--NPVAAHSGSEFALASTSFSRIAKGKRTDYVEVFD 103 (373)
T ss_pred cCCCCCCEEEEeCCcc-cCCccEEEEEECCCCeEEEEecCCCCC--CeEECCCCCEEEEEeccccccccCCCCCeEEEEE
Confidence 34467755444332 1 22 8999999999998888765555 554 443332 245 99999
Q ss_pred eCCcCceeeEEee-cCc---ceEEEEEeecCCeEEEEec-C-CCCeEEEEecCCCCeEEE-EEe
Q psy505 80 LNSIDTLEQIYEN-SQE---DVCIVERLFSSSLVAVVSL-S-SPRKLTVCHFKRGSEICN-YSF 136 (161)
Q Consensus 80 ~~~~~~~~~~~~~-~~~---~~~v~~~~fs~~~~~~~s~-~-~d~~i~iWD~~~~~~i~~-l~~ 136 (161)
..+.+...++.-+ ... ...-..++++|++..+... . .+++|.++| ++++.+.+ +..
T Consensus 104 ~~t~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~viD-~t~~~~~~~i~~ 166 (373)
T 2mad_H 104 PVTFLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVGLVV-QGGSSDDQLLSS 166 (373)
T ss_pred CCCCcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEEEEE-CCCCEEeEEcCC
Confidence 9887655433222 000 0012367899987655543 2 357899999 99998887 643
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.0023 Score=51.61 Aligned_cols=51 Identities=12% Similarity=-0.035 Sum_probs=38.1
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcC---------CCCcceEEEEEcCCCCceeeeecc
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPG---------SNSIGEVQIFDADNLHAKTMIPAH 57 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g---------~~~dg~v~iWd~~~~~~~~~l~~H 57 (161)
+|.+.++ .....| + ++++|||..+..+. .. +++|.+||+.+++.+.++..+
T Consensus 56 ~~v~~~i-~vG~~P-~---i~~spDg~~lyVan~~~~r~~~G~~-~~~VsviD~~T~~vv~~I~v~ 115 (368)
T 1mda_H 56 GVTLGHS-LGAFLS-L---AVAGHSGSDFALASTSFARSAKGKR-TDYVEVFDPVTFLPIADIELP 115 (368)
T ss_dssp TEEEEEE-EECTTC-E---EEECTTSSCEEEEEEEETTTTSSSE-EEEEEEECTTTCCEEEEEEET
T ss_pred CeEEEEE-eCCCCC-c---eEECCCCCEEEEEcccccccccCCC-CCEEEEEECCCCCEEEEEECC
Confidence 4677788 566666 4 66788987776653 32 688999999999999998644
|
| >3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.027 Score=42.96 Aligned_cols=112 Identities=8% Similarity=-0.020 Sum_probs=69.4
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccc-eeee-----eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPL-AALA-----SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V-~~l~-----~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
.-.|.+++ +....++|......|+..|+.+++.+..+.-...+. .+++ ++...-.++ +.+||.++.+.+.++
T Consensus 23 tqGL~~~~-~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~~~fgeGi~~~~~~ly~ltw~~~~v~v~D~~tl~~~~ti 101 (243)
T 3mbr_X 23 TEGLFYLR-GHLYESTGETGRSSVRKVDLETGRILQRAEVPPPYFGAGIVAWRDRLIQLTWRNHEGFVYDLATLTPRARF 101 (243)
T ss_dssp EEEEEEET-TEEEEEECCTTSCEEEEEETTTCCEEEEEECCTTCCEEEEEEETTEEEEEESSSSEEEEEETTTTEEEEEE
T ss_pred cccEEEEC-CEEEEECCCCCCceEEEEECCCCCEEEEEeCCCCcceeEEEEeCCEEEEEEeeCCEEEEEECCcCcEEEEE
Confidence 44666765 556666665212489999999999888776433321 2233 333344455 999999988766444
Q ss_pred EeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 90 YENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 90 ~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
.-+ ..+ ..+++....+ .+|.+ +++|.++|.++.+.+.++.
T Consensus 102 ~~~-~~G---wglt~dg~~L-~vSdg-s~~l~~iDp~t~~~~~~I~ 141 (243)
T 3mbr_X 102 RYP-GEG---WALTSDDSHL-YMSDG-TAVIRKLDPDTLQQVGSIK 141 (243)
T ss_dssp ECS-SCC---CEEEECSSCE-EEECS-SSEEEEECTTTCCEEEEEE
T ss_pred eCC-CCc---eEEeeCCCEE-EEECC-CCeEEEEeCCCCeEEEEEE
Confidence 322 222 2334444433 44543 5689999999998877764
|
| >3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ... | Back alignment and structure |
|---|
Probab=97.34 E-value=0.0081 Score=48.87 Aligned_cols=70 Identities=10% Similarity=-0.006 Sum_probs=52.5
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe--EEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL--VAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~--~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
|-+.|+++++.+..+.-++ ....++|++++ .++++...+++|.++|.++++.+.++.....-..+.+++|
T Consensus 313 V~viD~~t~kv~~~i~vg~----~~~~lavs~D~~~~ly~tn~~~~~VsViD~~t~k~~~~i~~~~~p~~l~~s~d 384 (386)
T 3sjl_D 313 VVVLDAKTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVNQLGHGPQVITTAD 384 (386)
T ss_dssp EEEEETTTCCEEEEEEEEE----EECEEEECSSSSCEEEEEETTTTEEEEEETTTCCEEEEECCCCSSCCEEEECC
T ss_pred EEEEECCCCeEEEEEECCC----CcceEEECCCCCeEEEEEcCCCCeEEEEECCCCcEEEEecCCCCCceeEECCc
Confidence 8899999988765554443 35678899886 3455555678999999999999999876665555666665
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0059 Score=47.94 Aligned_cols=105 Identities=15% Similarity=0.187 Sum_probs=64.1
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccC---------ccc-eeee----eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD---------SPL-AALA----SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~---------~~V-~~l~----~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
++..++. .. +|.|..+|..+|+.+..+.... ..+ .... .+..++.++ +..+|.++|+.+-+
T Consensus 53 ~~~v~~~-~~--~g~v~a~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~~g~l~a~d~~tG~~~W~- 128 (376)
T 3q7m_A 53 DNVVYAA-DR--AGLVKALNADDGKEIWSVSLAEKDGWFSKEPALLSGGVTVSGGHVYIGSEKAQVYALNTSDGTVAWQ- 128 (376)
T ss_dssp TTEEEEE-CT--TSEEEEEETTTCCEEEEEECCC---CCSCCCCCEEEEEEEETTEEEEEETTSEEEEEETTTCCEEEE-
T ss_pred CCEEEEE-cC--CCeEEEEEccCCceeeeecCccccccccccCcccccCceEeCCEEEEEcCCCEEEEEECCCCCEEEE-
Confidence 4444443 43 7899999999999887776532 222 2222 666778888 99999999975422
Q ss_pred EeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec
Q psy505 90 YENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS 137 (161)
Q Consensus 90 ~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~ 137 (161)
+.... .+ ........+.+ .++ +.++.|..+|.++|+.+-.+...
T Consensus 129 ~~~~~-~~-~~~p~~~~~~v-~v~-~~~g~l~~~d~~tG~~~W~~~~~ 172 (376)
T 3q7m_A 129 TKVAG-EA-LSRPVVSDGLV-LIH-TSNGQLQALNEADGAVKWTVNLD 172 (376)
T ss_dssp EECSS-CC-CSCCEEETTEE-EEE-CTTSEEEEEETTTCCEEEEEECC
T ss_pred EeCCC-ce-EcCCEEECCEE-EEE-cCCCeEEEEECCCCcEEEEEeCC
Confidence 22221 10 00111223433 333 35678999999999988666543
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.013 Score=48.15 Aligned_cols=97 Identities=6% Similarity=-0.026 Sum_probs=65.1
Q ss_pred ceEEEEEcCCCCceeeeeccCccceeee------eEEEec----------CCc-eEEEEeCCcCceeeEEee-cCc---c
Q psy505 38 GEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGT----------KSG-YRLFSLNSIDTLEQIYEN-SQE---D 96 (161)
Q Consensus 38 g~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs----------~dg-iriwd~~~~~~~~~~~~~-~~~---~ 96 (161)
+.|.+.|+.+++.+.++..-..+ .++ ++..+. .++ |.++|..+++...++.-+ ... .
T Consensus 99 ~~VsVID~~t~~vv~~I~vG~~P--gia~SpDgk~lyVan~~~~~~~~G~~~~~VsviD~~t~~vv~~I~v~g~~r~~~g 176 (426)
T 3c75_H 99 TQQFVIDGSTGRILGMTDGGFLP--HPVAAEDGSFFAQASTVFERIARGKRTDYVEVFDPVTFLPIADIELPDAPRFLVG 176 (426)
T ss_dssp EEEEEEETTTTEEEEEEEECSSC--EEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBS
T ss_pred CeEEEEECCCCEEEEEEECCCCC--ceEECCCCCEEEEEeccccccccCCCCCEEEEEECCCCcEEEEEECCCccccccC
Confidence 79999999999999999865566 566 332222 345 999999998765444322 000 0
Q ss_pred eEEEEEeecCCeEEE-EecC-CCCeEEEEecCCCCeEEEEEe
Q psy505 97 VCIVERLFSSSLVAV-VSLS-SPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 97 ~~v~~~~fs~~~~~~-~s~~-~d~~i~iWD~~~~~~i~~l~~ 136 (161)
..-..+.|+|++..+ ++.. .+++|.+.|+++++.+.++.-
T Consensus 177 ~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t~kvv~~I~v 218 (426)
T 3c75_H 177 TYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEGKTFDRMLDV 218 (426)
T ss_dssp CCGGGSEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCcceEEEcCCCCEEEEEecCCCCeEEEEECCCCeEEEEEEc
Confidence 001256789987433 3333 367899999999999888764
|
| >3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A | Back alignment and structure |
|---|
Probab=97.16 E-value=0.039 Score=43.14 Aligned_cols=126 Identities=14% Similarity=0.144 Sum_probs=71.4
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccc-----ee--ee--eEEEecCCc-eEEEEeCCcCceeeEEeecC
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPL-----AA--LA--SLSVGTKSG-YRLFSLNSIDTLEQIYENSQ 94 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V-----~~--l~--~lasgs~dg-iriwd~~~~~~~~~~~~~~~ 94 (161)
++..++ +.. +|.|..+|..+|+.+..+....... .. +. .+..++.+| +..+|.++|+.+-+......
T Consensus 143 ~~~v~v-~~~--~g~l~~~d~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~v~~g~~~g~l~~~d~~tG~~~w~~~~~~~ 219 (376)
T 3q7m_A 143 DGLVLI-HTS--NGQLQALNEADGAVKWTVNLDMPSLSLRGESAPTTAFGAAVVGGDNGRVSAVLMEQGQMIWQQRISQA 219 (376)
T ss_dssp TTEEEE-ECT--TSEEEEEETTTCCEEEEEECCC-----CCCCCCEEETTEEEECCTTTEEEEEETTTCCEEEEEECCC-
T ss_pred CCEEEE-EcC--CCeEEEEECCCCcEEEEEeCCCCceeecCCCCcEEECCEEEEEcCCCEEEEEECCCCcEEEEEecccC
Confidence 444444 343 8999999999999888776543221 11 11 666788888 99999999875432211110
Q ss_pred -cceE------E-EEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEecc
Q psy505 95 -EDVC------I-VERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 95 -~~~~------v-~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~~~ 156 (161)
.... + .......+.+++.+ .++.|..+|.++|+.+-.... +.........+.+.+...+
T Consensus 220 ~~~~~~~~~~~~~~~p~~~~~~v~~~~--~~g~l~~~d~~tG~~~w~~~~-~~~~~~~~~~~~l~~~~~~ 286 (376)
T 3q7m_A 220 TGSTEIDRLSDVDTTPVVVNGVVFALA--YNGNLTALDLRSGQIMWKREL-GSVNDFIVDGNRIYLVDQN 286 (376)
T ss_dssp ----------CCCCCCEEETTEEEEEC--TTSCEEEEETTTCCEEEEECC-CCEEEEEEETTEEEEEETT
T ss_pred CCCcccccccccCCCcEEECCEEEEEe--cCcEEEEEECCCCcEEeeccC-CCCCCceEECCEEEEEcCC
Confidence 0000 0 01112233343333 456899999999997755443 2334455556666666543
|
| >3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A* | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0045 Score=53.31 Aligned_cols=130 Identities=7% Similarity=0.065 Sum_probs=76.7
Q ss_pred CceeEEeecCCCceEEEEcCCC--CcceEEEEEcCCCC-ceeeeeccCcccee-ee-----eEEEecCC---c-eEEEEe
Q psy505 14 PNGICCLCVNSDNCYLAYPGSN--SIGEVQIFDADNLH-AKTMIPAHDSPLAA-LA-----SLSVGTKS---G-YRLFSL 80 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~--~dg~v~iWd~~~~~-~~~~l~~H~~~V~~-l~-----~lasgs~d---g-iriwd~ 80 (161)
+.....++++|||.+|+.+... .+..|.+||+.++. ....+..+.+.... +. +++.+..+ + +..+|+
T Consensus 233 ~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~~~~~~~~~~~~~~g~~l~~~t~~~~~~~~l~~~d~ 312 (693)
T 3iuj_A 233 HHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQGDLDADVSLVDNKGSTLYLLTNRDAPNRRLVTVDA 312 (693)
T ss_dssp CCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEECSSSSCEEEEEEETTEEEEEECTTCTTCEEEEEET
T ss_pred CeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEeCCCCceEEEEeccCCEEEEEECCCCCCCEEEEEeC
Confidence 3346678889999988654321 13589999998764 55677777665544 22 44444443 4 778888
Q ss_pred CCcCc--eeeEEeecCcceEEEEEeecCCeEEEEecCCC--CeEEEEecCCCCeEEEEEec--CceEEEEECCc
Q psy505 81 NSIDT--LEQIYENSQEDVCIVERLFSSSLVAVVSLSSP--RKLTVCHFKRGSEICNYSFS--NTILAVKLNRK 148 (161)
Q Consensus 81 ~~~~~--~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d--~~i~iWD~~~~~~i~~l~~~--~~V~~v~~~~~ 148 (161)
.+++. .. .+..|...+ + .+....+.+++... .+ ..|++||+. +.....+.++ ..+..+.++|+
T Consensus 313 ~~~~~~~~~-~l~~~~~~~-~-~~s~~g~~lv~~~~-~~g~~~l~~~d~~-g~~~~~l~~p~~~~~~~~~~~~d 381 (693)
T 3iuj_A 313 ANPGPAHWR-DLIPERQQV-L-TVHSGSGYLFAEYM-VDATARVEQFDYE-GKRVREVALPGLGSVSGFNGKHD 381 (693)
T ss_dssp TSCCGGGCE-EEECCCSSC-E-EEEEETTEEEEEEE-ETTEEEEEEECTT-SCEEEEECCSSSSEEEECCCCTT
T ss_pred CCCCccccE-EEecCCCCE-E-EEEEECCEEEEEEE-ECCeeEEEEEECC-CCeeEEeecCCCceEEeeecCCC
Confidence 77653 22 233444332 2 44444455544432 22 269999987 4455666653 45666666654
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0057 Score=52.92 Aligned_cols=60 Identities=10% Similarity=0.111 Sum_probs=38.0
Q ss_pred c-eEEEEeCCcCceeeEEeecCcceEEEEEeec-CCeEEEEecCCCCeEEEEecCCCCeEEEEEecC
Q psy505 74 G-YRLFSLNSIDTLEQIYENSQEDVCIVERLFS-SSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSN 138 (161)
Q Consensus 74 g-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs-~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~ 138 (161)
| +..||+.+|+.+-+. .... . .....+. .+++.+++ +.|+.+++||.++|+.+-++....
T Consensus 457 g~l~A~D~~tG~~~W~~-~~~~-~--~~~g~~~~~g~~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~ 518 (677)
T 1kb0_A 457 GRLLAWDPVAQKAAWSV-EHVS-P--WNGGTLTTAGNVVFQG-TADGRLVAYHAATGEKLWEAPTGT 518 (677)
T ss_dssp EEEEEEETTTTEEEEEE-EESS-S--CCCCEEEETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSS
T ss_pred cEEEEEeCCCCcEEeec-CCCC-C--CcCcceEeCCCEEEEE-CCCCcEEEEECCCCceeeeeeCCC
Confidence 6 999999998754332 2211 1 1111122 23444443 578999999999999998887543
|
| >3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus} | Back alignment and structure |
|---|
Probab=97.10 E-value=0.032 Score=45.81 Aligned_cols=32 Identities=16% Similarity=0.296 Sum_probs=28.5
Q ss_pred CCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 117 PRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 117 d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
.++|.+.|+++++.+.++.-....+++.|+||
T Consensus 349 s~~VsVID~~T~kvv~~I~vg~~P~gia~spD 380 (426)
T 3c75_H 349 SRFVVVLNAETGERINKIELGHEIDSINVSQD 380 (426)
T ss_dssp EEEEEEEETTTCCEEEEEEEEEEECEEEECCS
T ss_pred CCEEEEEECCCCeEEEEEECCCCcCeEEEccC
Confidence 35799999999999999987778999999997
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.05 E-value=0.0011 Score=57.42 Aligned_cols=71 Identities=15% Similarity=0.095 Sum_probs=48.5
Q ss_pred cceEEEEEcCCCCceeeeeccCccce-eee----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLA-ALA----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV 109 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~-~l~----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~ 109 (161)
+|.++.||+.+|+.+..++.+..... .++ ++..|+.|| ++.||.++|+.+-++..++. +...-+.|+.++.
T Consensus 454 ~g~l~A~D~~tG~~~W~~~~~~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~lw~~~~~~~--~~~~p~ty~~~G~ 530 (689)
T 1yiq_A 454 SGKLIAWDPVKQQAAWEVPYVTIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKLWEQPAASG--VMAAPVTYSVDGE 530 (689)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC--CCSCCEEEEETTE
T ss_pred ceeEEEEECCCCCeEeEccCCCCccCccceECCCEEEEECCCCcEEEEECCCCccceeeeCCCC--cccCceEEEECCE
Confidence 48899999999999988876643222 222 788899999 99999999987644433322 1112355665544
|
| >1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0085 Score=51.92 Aligned_cols=48 Identities=15% Similarity=0.095 Sum_probs=35.9
Q ss_pred eEEEEEcCCCCceeeeeccCccce-----------ee-------eeEEEecCCc-eEEEEeCCcCce
Q psy505 39 EVQIFDADNLHAKTMIPAHDSPLA-----------AL-------ASLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 39 ~v~iWd~~~~~~~~~l~~H~~~V~-----------~l-------~~lasgs~dg-iriwd~~~~~~~ 86 (161)
.|.-||+.+|+.+..++......+ ++ ..++.++.+| +.++|.++|+.+
T Consensus 276 ~v~AlD~~TG~~~W~~~~~~~d~wd~~~~~~~~l~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 342 (689)
T 1yiq_A 276 SIVAVNADTGEYVWHYQTTPGDAWDYTATQHMILAELPIDGKPRKVLMQAPKNGFFYVIDRATGELL 342 (689)
T ss_dssp EEEEEETTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred eEEEEEccCCceeEeeecCCcccccccCCCCcEEEeeccCCcEEEEEEEECCCCeEEEEECCCCCEe
Confidence 499999999999988875322111 11 1577889999 999999999865
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.025 Score=48.52 Aligned_cols=143 Identities=13% Similarity=0.067 Sum_probs=87.1
Q ss_pred CcceEEecCCCCCCceeEEeec-C-CCceEEEEcC-----------------CCCcceEEEEEcCCCCceeeeeccCccc
Q psy505 1 MKVLHTIRDTPPNPNGICCLCV-N-SDNCYLAYPG-----------------SNSIGEVQIFDADNLHAKTMIPAHDSPL 61 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~-~-~d~~~la~~g-----------------~~~dg~v~iWd~~~~~~~~~l~~H~~~V 61 (161)
||+...+ +-++..+.-.+++ + |++.++.+++ .. ++.+-+.|..+++.+.++.--.++=
T Consensus 122 ~~~~~ii--~ip~g~~phg~~~~~~p~~~~v~~~~~~~~p~~~dg~~l~~~~~~-~~~vtvID~~t~~v~~qI~Vgg~pd 198 (595)
T 1fwx_A 122 MKCDAIL--EIPNAKGIHGLRPQKWPRSNYVFCNGEDETPLVNDGTNMEDVANY-VNVFTAVDADKWEVAWQVLVSGNLD 198 (595)
T ss_dssp TEEEEEE--ECSSCCSEEEEEECCSSBCSEEEEEECSCEESSCSSSSTTCGGGE-EEEEEEEETTTTEEEEEEEESSCCC
T ss_pred ceEeeEE--eCCCCCCCcceeeeecCCCcEEEEecccccccCCCCccccccccc-CceEEEEECCCCeEEEEEEeCCCcc
Confidence 4556644 2244445556665 4 7888887763 33 6789999999988877765311221
Q ss_pred -eeee----eEEEec-C--------------------------------------CceEEEEeCC--cCc-eeeEEeecC
Q psy505 62 -AALA----SLSVGT-K--------------------------------------SGYRLFSLNS--IDT-LEQIYENSQ 94 (161)
Q Consensus 62 -~~l~----~lasgs-~--------------------------------------dgiriwd~~~--~~~-~~~~~~~~~ 94 (161)
-.++ ++.+.+ . +++.+.|.++ +.. +..+-.+..
T Consensus 199 ~~~~spdGk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~ 278 (595)
T 1fwx_A 199 NCDADYEGKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANN 278 (595)
T ss_dssp CEEECSSSSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESS
T ss_pred ceEECCCCCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCC
Confidence 1121 332222 1 1277778776 433 222323322
Q ss_pred cceEEEEEeecCCeE-EEEecCCCCeEEEEecCCCC------------eEEEEEecCceEEEEECCcEE
Q psy505 95 EDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGS------------EICNYSFSNTILAVKLNRKKE 150 (161)
Q Consensus 95 ~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~------------~i~~l~~~~~V~~v~~~~~~~ 150 (161)
-..+.++||+. +++++..+++|.++|+++.+ .+.++.-....+.++|+|++.
T Consensus 279 ----PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~ 343 (595)
T 1fwx_A 279 ----PHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGN 343 (595)
T ss_dssp ----CCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSE
T ss_pred ----ceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCe
Confidence 23567999885 55666677899999999653 344555557889999999864
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.011 Score=44.87 Aligned_cols=119 Identities=9% Similarity=0.032 Sum_probs=73.6
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceE
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVC 98 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~ 98 (161)
++...+. .. +|.+..+|.. ++....+..+...+.++. .+..|+.++ +..||.. |+... .+..... .
T Consensus 107 ~~~l~v~-t~--~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~~~~g~l~vgt~~~~l~~~d~~-g~~~~-~~~~~~~--~ 178 (330)
T 3hxj_A 107 EDILYVT-SM--DGHLYAINTD-GTEKWRFKTKKAIYATPIVSEDGTIYVGSNDNYLYAINPD-GTEKW-RFKTNDA--I 178 (330)
T ss_dssp TTEEEEE-CT--TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTSCEEEECTTSEEEEECTT-SCEEE-EEECSSC--C
T ss_pred CCEEEEE-ec--CCEEEEEcCC-CCEEEEEcCCCceeeeeEEcCCCEEEEEcCCCEEEEECCC-CCEeE-EEecCCC--c
Confidence 5544443 33 7889999988 777777766666566555 555677766 9999987 65432 2222221 2
Q ss_pred EEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-cCceEEEEECCc-EEEEEec
Q psy505 99 IVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-SNTILAVKLNRK-KEEEEDE 155 (161)
Q Consensus 99 v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~~~~~-~~vv~~~ 155 (161)
+.++.+.+++...++. +.|..+| .+++.+-.+.. ...+.++.+.++ .+.+...
T Consensus 179 ~~~~~~d~~g~l~v~t---~~l~~~d-~~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~ 233 (330)
T 3hxj_A 179 TSAASIGKDGTIYFGS---DKVYAIN-PDGTEKWNFYAGYWTVTRPAISEDGTIYVTSL 233 (330)
T ss_dssp CSCCEECTTCCEEEES---SSEEEEC-TTSCEEEEECCSSCCCSCCEECTTSCEEEEET
T ss_pred eeeeEEcCCCEEEEEe---CEEEEEC-CCCcEEEEEccCCcceeceEECCCCeEEEEcC
Confidence 3345555555544543 5789999 77776655543 355777777776 5555553
|
| >1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0063 Score=52.16 Aligned_cols=125 Identities=12% Similarity=0.080 Sum_probs=79.0
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCc-------------------------------------ceEEEE
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSI-------------------------------------GEVQIF 43 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~d-------------------------------------g~v~iW 43 (161)
|+.+.++ ....||.++. .+|||.++.+++.. + +.|.+-
T Consensus 185 ~~v~~qI-~Vgg~pd~~~---~spdGk~~~vt~~~-se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VI 259 (595)
T 1fwx_A 185 WEVAWQV-LVSGNLDNCD---ADYEGKWAFSTSYN-SEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVV 259 (595)
T ss_dssp TEEEEEE-EESSCCCCEE---ECSSSSEEEEEESC-TTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEE
T ss_pred CeEEEEE-EeCCCccceE---ECCCCCEEEEEecC-cccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEE
Confidence 5677787 4545887764 47788888776642 2 247778
Q ss_pred EcCC--CCc-eeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcC------------ceeeEEeecCcceEEE
Q psy505 44 DADN--LHA-KTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSID------------TLEQIYENSQEDVCIV 100 (161)
Q Consensus 44 d~~~--~~~-~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~------------~~~~~~~~~~~~~~v~ 100 (161)
|.++ ++. +..+..-.++ .++. .++++-.+. +-++|+++.+ ...+..-|. .-.
T Consensus 260 D~~~~~~~~~~~~Ipvg~~P-hGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~----gP~ 334 (595)
T 1fwx_A 260 DGRKEASSLFTRYIPIANNP-HGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGL----GPL 334 (595)
T ss_dssp ECSGGGCCSSEEEEEEESSC-CCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCS----CEE
T ss_pred eCcccCCceeEEEEecCCCc-eEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCC----Ccc
Confidence 8877 444 4556543332 2333 444444444 9999997542 111121121 235
Q ss_pred EEeecCCeEEEEecCCCCeEEEEecCC----------CCeEEEEE
Q psy505 101 ERLFSSSLVAVVSLSSPRKLTVCHFKR----------GSEICNYS 135 (161)
Q Consensus 101 ~~~fs~~~~~~~s~~~d~~i~iWD~~~----------~~~i~~l~ 135 (161)
.++|+|++.+.++..-|++|.+||..+ .+.+..+.
T Consensus 335 h~aF~~dG~aY~t~~ldsqV~kwdi~~a~~~~~g~~~~~vi~kid 379 (595)
T 1fwx_A 335 HTAFDGRGNAYTSLFLDSQVVKWNIEDAIRAYAGEKVDPIKDKLD 379 (595)
T ss_dssp EEEECTTSEEEEEETTTTEEEEEEHHHHHHHHHTCSCCCEEEEEE
T ss_pred eEEECCCCeEEEEEecCCcEEEEEhhHhhhhhcccccceeEEEee
Confidence 678999998888887889999999987 56677765
|
| >3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.017 Score=43.93 Aligned_cols=131 Identities=9% Similarity=-0.033 Sum_probs=76.6
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCceEEEEeCCcCceeeEEee
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSGYRLFSLNSIDTLEQIYEN 92 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dgiriwd~~~~~~~~~~~~~ 92 (161)
.++..+++|...+. .. ++.+..+|.. ++.+..+..+...+.++. .+..|+ .++..|| .+|+.+.+. ..
T Consensus 140 ~~~~~~~~g~l~vg-t~--~~~l~~~d~~-g~~~~~~~~~~~~~~~~~~d~~g~l~v~t-~~l~~~d-~~g~~~~~~-~~ 212 (330)
T 3hxj_A 140 ATPIVSEDGTIYVG-SN--DNYLYAINPD-GTEKWRFKTNDAITSAASIGKDGTIYFGS-DKVYAIN-PDGTEKWNF-YA 212 (330)
T ss_dssp SCCEECTTSCEEEE-CT--TSEEEEECTT-SCEEEEEECSSCCCSCCEECTTCCEEEES-SSEEEEC-TTSCEEEEE-CC
T ss_pred eeeEEcCCCEEEEE-cC--CCEEEEECCC-CCEeEEEecCCCceeeeEEcCCCEEEEEe-CEEEEEC-CCCcEEEEE-cc
Confidence 34445667776664 33 6899999998 887777776666666665 444455 5599999 676643222 11
Q ss_pred cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecC-ceEEEEEC-CcEEEEEecc-cee
Q psy505 93 SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSN-TILAVKLN-RKKEEEEDEE-EEK 159 (161)
Q Consensus 93 ~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~-~V~~v~~~-~~~~vv~~~~-~~~ 159 (161)
. ...+.++...+++...++. .++.|..+|. +++.+..+.... .+.++.+. ...+.+...+ .++
T Consensus 213 ~--~~~~~~~~~~~~g~l~v~t-~~~gl~~~~~-~g~~~~~~~~~~~~~~~~~~~~~g~l~v~t~~ggl~ 278 (330)
T 3hxj_A 213 G--YWTVTRPAISEDGTIYVTS-LDGHLYAINP-DGTEKWRFKTGKRIESSPVIGNTDTIYFGSYDGHLY 278 (330)
T ss_dssp S--SCCCSCCEECTTSCEEEEE-TTTEEEEECT-TSCEEEEEECSSCCCSCCEECTTSCEEEECTTCEEE
T ss_pred C--CcceeceEECCCCeEEEEc-CCCeEEEECC-CCCEeEEeeCCCCccccceEcCCCeEEEecCCCCEE
Confidence 1 1224456677774444433 3467888874 676665555332 23344455 3456555554 444
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.019 Score=50.12 Aligned_cols=138 Identities=8% Similarity=0.047 Sum_probs=74.9
Q ss_pred eeEEeecC-CCceEEEEcCCCCcc----eEEEEEcCCC-Ccee-eeec-cCccceeee--eEEEecCC-----c-eEEEE
Q psy505 16 GICCLCVN-SDNCYLAYPGSNSIG----EVQIFDADNL-HAKT-MIPA-HDSPLAALA--SLSVGTKS-----G-YRLFS 79 (161)
Q Consensus 16 ~v~~~~~~-~d~~~la~~g~~~dg----~v~iWd~~~~-~~~~-~l~~-H~~~V~~l~--~lasgs~d-----g-iriwd 79 (161)
.+.+++++ |||++||++... +| +|+++|+.++ +.+. .+.. -.++.++-. .|+..+.| . |.+++
T Consensus 175 ~~~~~~~S~PDG~~lAy~~~~-~G~~~~~l~v~dl~~g~~~l~~~~~~~~~~~~WspDg~~l~y~~~d~~~~~~~v~~~~ 253 (751)
T 2xe4_A 175 DVMEVKPAPPEHDLVAFSVDM-SGNEVYTIEFKRISDPSQTIADKVSGTNGEIVWGPDHTSLFYVTKDETLRENKVWRHV 253 (751)
T ss_dssp EEEEEEECTTTTCEEEEEEES-SSSSCEEEEEEETTCTTCCCCCCEEEECSCCEECSSTTEEEEEEECTTCCEEEEEEEE
T ss_pred EEeeeEecCCCCCEEEEEEeC-CCCceEEEEEEECCCCCEeCCccccCceeeEEEecCCCEEEEEEECCCCCCCEEEEEE
Confidence 56678889 999999986542 33 5999999998 6322 2221 122233222 33333332 2 66677
Q ss_pred eCCcCce-eeEEeecCcceEEEEEeecCCeEEEE--ec-CCCCeEEEEecCCCC--e-EEEEE--ecCceEEEEEC-CcE
Q psy505 80 LNSIDTL-EQIYENSQEDVCIVERLFSSSLVAVV--SL-SSPRKLTVCHFKRGS--E-ICNYS--FSNTILAVKLN-RKK 149 (161)
Q Consensus 80 ~~~~~~~-~~~~~~~~~~~~v~~~~fs~~~~~~~--s~-~~d~~i~iWD~~~~~--~-i~~l~--~~~~V~~v~~~-~~~ 149 (161)
+.++... ..+++..... ......+||++..++ +. .....|.++|+.++. . +..+. ..+..+++.|+ .+.
T Consensus 254 lgt~~~~~~lv~~~~~~~-~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~ 332 (751)
T 2xe4_A 254 MGKLQSEDVCLYEEHNPL-FSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSH 332 (751)
T ss_dssp TTSCGGGCEEEEECCCTT-CEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTE
T ss_pred CCCCchhcEEEEecCCCc-eEEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCE
Confidence 7665321 1344432222 345778999875443 32 234569999998762 2 13332 23455666643 345
Q ss_pred EEEEec
Q psy505 150 EEEEDE 155 (161)
Q Consensus 150 ~vv~~~ 155 (161)
+++..+
T Consensus 333 l~~~t~ 338 (751)
T 2xe4_A 333 LVILTN 338 (751)
T ss_dssp EEEEEC
T ss_pred EEEEeC
Confidence 555443
|
| >1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0043 Score=53.69 Aligned_cols=69 Identities=14% Similarity=0.120 Sum_probs=46.9
Q ss_pred cceEEEEEcCCCCceeeeeccCccceee--e----eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAAL--A----SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL 108 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l--~----~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~ 108 (161)
.|.|..||+.+++.+..++.. .++.+. . ++..|+.|| +++||.++|+.+.++..++. +...-+.|+.++
T Consensus 456 ~g~l~A~D~~tG~~~W~~~~~-~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~~~~~~~--~~~~p~~y~~~G 531 (677)
T 1kb0_A 456 FGRLLAWDPVAQKAAWSVEHV-SPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEAPTGTG--VVAAPSTYMVDG 531 (677)
T ss_dssp EEEEEEEETTTTEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEEECSSC--CCSCCEEEEETT
T ss_pred ccEEEEEeCCCCcEEeecCCC-CCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeeeeeCCCC--cccCCEEEEeCC
Confidence 388999999999998888643 333332 2 677788999 99999999997755443432 112234565554
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=96.43 E-value=0.11 Score=39.79 Aligned_cols=139 Identities=6% Similarity=-0.108 Sum_probs=73.8
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeecc--------------------Cccceeee------eEEEe-
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAH--------------------DSPLAALA------SLSVG- 70 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H--------------------~~~V~~l~------~lasg- 70 (161)
..++++++|.++.+... ++.|..||..+++.. .+... .....+++ .|..+
T Consensus 22 ~~i~~d~~g~~l~v~~~--~~~i~~~~~~~~~~~-~~~~~~~~~~~~~~~g~~~~~~~~~~~~p~gi~~~~~~g~l~v~d 98 (322)
T 2fp8_A 22 NSFTFDSTNKGFYTSVQ--DGRVIKYEGPNSGFV-DFAYASPYWNKAFCENSTDAEKRPLCGRTYDISYNLQNNQLYIVD 98 (322)
T ss_dssp CCEECCTTCSSEEEECT--TSEEEEECCTTTCEE-EEEESCTTCCHHHHTTCCCGGGHHHHCCEEEEEEETTTTEEEEEE
T ss_pred eEEEEcCCCCEEEEEcC--CCeEEEECCCCCceE-EEecccccccccccccccchhccccCCCCceEEEcCCCCcEEEEE
Confidence 34556788874444333 788999998865432 22210 01234443 23333
Q ss_pred cCCceEEEEeCCcCceeeEEeecCc--ceEEEEEeecC-CeEEEEecC-----------------CCCeEEEEecCCCCe
Q psy505 71 TKSGYRLFSLNSIDTLEQIYENSQE--DVCIVERLFSS-SLVAVVSLS-----------------SPRKLTVCHFKRGSE 130 (161)
Q Consensus 71 s~dgiriwd~~~~~~~~~~~~~~~~--~~~v~~~~fs~-~~~~~~s~~-----------------~d~~i~iWD~~~~~~ 130 (161)
...++..+|..++. +..+.....+ ......+++.+ ++...++.. .++.|..||..+++.
T Consensus 99 ~~~~i~~~d~~~g~-~~~~~~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~ 177 (322)
T 2fp8_A 99 CYYHLSVVGSEGGH-ATQLATSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKET 177 (322)
T ss_dssp TTTEEEEECTTCEE-CEEEESEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEE
T ss_pred CCCCEEEEeCCCCE-EEEecccCCCCcccccceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEE
Confidence 33448888876553 2122111110 01245678888 775555432 135789999887764
Q ss_pred EEEEEecCceEEEEECCc--EEEEEec--cceee
Q psy505 131 ICNYSFSNTILAVKLNRK--KEEEEDE--EEEKK 160 (161)
Q Consensus 131 i~~l~~~~~V~~v~~~~~--~~vv~~~--~~~~~ 160 (161)
......-.....++++|+ .+.|+.. ++|++
T Consensus 178 ~~~~~~~~~p~gia~~~dg~~lyv~d~~~~~I~~ 211 (322)
T 2fp8_A 178 TLLLKELHVPGGAEVSADSSFVLVAEFLSHQIVK 211 (322)
T ss_dssp EEEEEEESCCCEEEECTTSSEEEEEEGGGTEEEE
T ss_pred EEeccCCccCcceEECCCCCEEEEEeCCCCeEEE
Confidence 322222244567899997 3555532 35543
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.11 Score=44.16 Aligned_cols=66 Identities=12% Similarity=0.059 Sum_probs=40.7
Q ss_pred Cc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEE
Q psy505 73 SG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILA 142 (161)
Q Consensus 73 dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~ 142 (161)
+| +.-||+.+|+.+-+...+ . ...--.+.- .++++++ ++.|+.++.||.++|+.+-++..++.+.+
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~-~-~~~~g~~~t-agglvf~-g~~dg~l~A~D~~tG~~lW~~~~~~g~~a 531 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEH-L-PLWAGVLAT-AGNLVFT-GTGDGYFKAFDAKSGKELWKFQTGSGIVS 531 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEES-S-CCCSCCEEE-TTTEEEE-ECTTSEEEEEETTTCCEEEEEECSSCCCS
T ss_pred cceEEEEECCCCCEEEEecCC-C-CCcccceEe-CCCEEEE-ECCCCcEEEEECCCCCEEEEecCCCCccc
Confidence 57 999999999754322221 1 100001112 2445555 34689999999999999988876555443
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=96.12 E-value=0.18 Score=43.35 Aligned_cols=48 Identities=13% Similarity=0.156 Sum_probs=35.7
Q ss_pred eEEEEEcCCCCceeeeec--cC-------ccce--eee-------eEEEecCCc-eEEEEeCCcCce
Q psy505 39 EVQIFDADNLHAKTMIPA--HD-------SPLA--ALA-------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 39 ~v~iWd~~~~~~~~~l~~--H~-------~~V~--~l~-------~lasgs~dg-iriwd~~~~~~~ 86 (161)
.|.-+|+.+|+.+..++. |. .+.. .+. .++.++.+| +.++|.++|+.+
T Consensus 271 ~v~AlD~~tG~~~W~~~~~~~~~wd~~~~~~~~~~d~~~~G~~~~~v~~~~~~G~l~~lD~~tG~~l 337 (668)
T 1kv9_A 271 SILAIRPDTGKLAWHYQVTPGDSWDFTATQQITLAELNIDGKPRKVLMQAPKNGFFYVLDRTNGKLI 337 (668)
T ss_dssp EEEEECTTTCCEEEEEESSTTCCSCCCCCSCEEEEEEEETTEEEEEEEECCTTSEEEEEETTTCCEE
T ss_pred eEEEEcCCCCceeeEeecCCCccccccCCCCcEEEEeccCCcEEEEEEEECCCCEEEEEECCCCCEe
Confidence 499999999999988875 32 1111 111 478889999 999999999865
|
| >2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.07 E-value=0.23 Score=41.31 Aligned_cols=109 Identities=10% Similarity=0.200 Sum_probs=58.9
Q ss_pred eecCCCceEEEEcCCC---CcceEEEEEcCCCCceeeeeccCcc--ce-ee--e----eEEEec----------------
Q psy505 20 LCVNSDNCYLAYPGSN---SIGEVQIFDADNLHAKTMIPAHDSP--LA-AL--A----SLSVGT---------------- 71 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~---~dg~v~iWd~~~~~~~~~l~~H~~~--V~-~l--~----~lasgs---------------- 71 (161)
+...|||.++.+.|+. ..|.|-+.|..+++.+.++..-.++ +. ++ + .+.+..
T Consensus 143 ~~~~pdGi~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~~~~~Yd~~~~p~~~~mvsS~wg~p~~~~~g~~~~~~ 222 (462)
T 2ece_A 143 VHCGPDAIYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGDQYLAYDFWWNLPNEVLVSSEWAVPNTIEDGLKLEHL 222 (462)
T ss_dssp EEECSSCEEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTTCCCCCCEEEETTTTEEEECBCCCHHHHTTCCCTTTH
T ss_pred eeECCCeEEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCCccccceEEECCCCCEEEEccCcCccccccccchhhh
Confidence 3456888444333320 0278999999999999888632222 11 22 1 344443
Q ss_pred ----CCceEEEEeCCcCceeeEEeecCc-ceEEEEEeecCCeE-EEEecC-----CCCeEEEEecCCC
Q psy505 72 ----KSGYRLFSLNSIDTLEQIYENSQE-DVCIVERLFSSSLV-AVVSLS-----SPRKLTVCHFKRG 128 (161)
Q Consensus 72 ----~dgiriwd~~~~~~~~~~~~~~~~-~~~v~~~~fs~~~~-~~~s~~-----~d~~i~iWD~~~~ 128 (161)
.|.|.+||+.+++....+--+..+ ...-+.++|+|++. +.+.+- .+++|.+|....|
T Consensus 223 ~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g 290 (462)
T 2ece_A 223 KDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDG 290 (462)
T ss_dssp HHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETT
T ss_pred hhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCC
Confidence 223999999887544333222111 11122345698763 333333 4567877765544
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=95.47 E-value=0.54 Score=40.79 Aligned_cols=134 Identities=13% Similarity=0.028 Sum_probs=80.5
Q ss_pred ceeEEeecCCCce-EEEEcCCCCcceEEEEEcCCCCceeeee----ccCccceeee-----eEEEecCCceEEEEeCCcC
Q psy505 15 NGICCLCVNSDNC-YLAYPGSNSIGEVQIFDADNLHAKTMIP----AHDSPLAALA-----SLSVGTKSGYRLFSLNSID 84 (161)
Q Consensus 15 ~~v~~~~~~~d~~-~la~~g~~~dg~v~iWd~~~~~~~~~l~----~H~~~V~~l~-----~lasgs~dgiriwd~~~~~ 84 (161)
..|.++..+++|. +.+.+. ++-+..+|..+++...... -+...|.++. .|-.|+.+|+.+||..+++
T Consensus 406 ~~v~~i~~d~~g~~lWigt~---~~Gl~~~d~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 406 NNIKAVYVDEKKSLVYIGTH---AGGLSILHRNSGQVENFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRS 482 (795)
T ss_dssp SCEEEEEEETTTTEEEEEET---TTEEEEEETTTCCEEEECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTE
T ss_pred ccEEEEEEcCCCCEEEEEeC---cCceeEEeCCCCcEEEeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCe
Confidence 3588888888886 554322 4669999998876543221 2345677776 3334455789999987753
Q ss_pred ceeeEEee----cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-------e-cCceEEEEECCc-EEE
Q psy505 85 TLEQIYEN----SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-------F-SNTILAVKLNRK-KEE 151 (161)
Q Consensus 85 ~~~~~~~~----~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-------~-~~~V~~v~~~~~-~~v 151 (161)
+...... ......+.++...+++..-++.. +.|..||.++++. .+. . ...|.++...++ .+-
T Consensus 483 -~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~--~Gl~~~~~~~~~~--~~~~~~~~~~l~~~~i~~i~~d~~g~lW 557 (795)
T 4a2l_A 483 -FTTIEKEKDGTPVVSKQITTLFRDSHKRLWIGGE--EGLSVFKQEGLDI--QKASILPVSNVTKLFTNCIYEASNGIIW 557 (795)
T ss_dssp -EEECCBCTTCCBCCCCCEEEEEECTTCCEEEEES--SCEEEEEEETTEE--EECCCSCSCGGGGSCEEEEEECTTSCEE
T ss_pred -EEEccccccccccCCceEEEEEECCCCCEEEEeC--CceEEEeCCCCeE--EEecCCCCCCCCCCeeEEEEECCCCCEE
Confidence 3222111 00112466777877665444432 4699999987765 332 1 246888888765 455
Q ss_pred EEecc
Q psy505 152 EEDEE 156 (161)
Q Consensus 152 v~~~~ 156 (161)
+.+.+
T Consensus 558 igT~~ 562 (795)
T 4a2l_A 558 VGTRE 562 (795)
T ss_dssp EEESS
T ss_pred EEeCC
Confidence 55544
|
| >1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1 | Back alignment and structure |
|---|
Probab=95.39 E-value=0.039 Score=44.37 Aligned_cols=71 Identities=6% Similarity=-0.057 Sum_probs=50.8
Q ss_pred CceEEEEeCCcCceeeEEeecCcceEEEEEeecCCeE-EEEecC-CCCeEEEEecCCCCeEEEEEecCceEEEEECC
Q psy505 73 SGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV-AVVSLS-SPRKLTVCHFKRGSEICNYSFSNTILAVKLNR 147 (161)
Q Consensus 73 dgiriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~-~~~s~~-~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~ 147 (161)
+++.++|+.+.+.+..+.-+. ....++|+|++. .+++.. .+++|.++|+++++.+.++.-....+++.+.+
T Consensus 294 ~~~~ViD~~t~~vv~~i~vg~----~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~vg~~P~~i~~~~ 366 (368)
T 1mda_H 294 ENTSSVTASVGQTSGPISNGH----DSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVELDKGPESLSVQN 366 (368)
T ss_dssp EEEEEEESSSCCEEECCEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECCCCSCCCEEECCC
T ss_pred CCEEEEECCCCeEEEEEECCC----CcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEECCCCCCEEEeec
Confidence 356699999987665443332 356788999874 455554 57899999999999998887556666666654
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=95.24 E-value=0.22 Score=42.07 Aligned_cols=64 Identities=16% Similarity=0.126 Sum_probs=38.8
Q ss_pred CCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCc
Q psy505 72 KSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNT 139 (161)
Q Consensus 72 ~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~ 139 (161)
.+| +..||..+|+.+-+...+ . ......+. ..++..+++ +.|+.|+.||.++|+.+-++...+.
T Consensus 442 ~~g~l~a~D~~tG~~~W~~~~~-~-~~~~~~~~-t~gg~v~~g-~~dg~l~a~D~~tG~~lw~~~~~~~ 506 (571)
T 2ad6_A 442 EMGQIRAFDLTTGKAKWTKWEK-F-AAWGGTLY-TKGGLVWYA-TLDGYLKALDNKDGKELWNFKMPSG 506 (571)
T ss_dssp CCEEEEEECTTTCCEEEEEEES-S-CCCSBCEE-ETTTEEEEE-CTTSEEEEEETTTCCEEEEEECSSC
T ss_pred CCCeEEEEECCCCCEEEEecCC-C-CccceeEE-ECCCEEEEE-cCCCeEEEEECCCCCEEEEEeCCCC
Confidence 357 999999998754332211 1 10000111 224444453 4678999999999999988875443
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=95.23 E-value=0.93 Score=36.34 Aligned_cols=141 Identities=9% Similarity=0.103 Sum_probs=81.1
Q ss_pred CCCceeEEeecCC-Cce-EEEEcCCCCcceEEEEEcC-------CCCceeeeeccCccceeee-----eEEEecCCc-eE
Q psy505 12 PNPNGICCLCVNS-DNC-YLAYPGSNSIGEVQIFDAD-------NLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YR 76 (161)
Q Consensus 12 ~~~~~v~~~~~~~-d~~-~la~~g~~~dg~v~iWd~~-------~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-ir 76 (161)
..+.|+|... +| .+. ++...+. +|.+..|++. +.+.+.+|.--..+=.|+. .|..+-++. |.
T Consensus 128 ~~pyGlcly~-~~~~g~~yafV~~k--~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~g~Lyv~eEd~GIw 204 (355)
T 3amr_A 128 NEVYGFTLYH-SQKTGKYYAMVTGK--EGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEYGRLYIAEEDEAIW 204 (355)
T ss_dssp SSCCCEEEEE-CTTTCCEEEEEECS--SSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTTTEEEEEETTTEEE
T ss_pred CCeeEEEEEe-cCCCCcEEEEEECC--CCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCCCeEEEecccceEE
Confidence 4556665543 44 454 4555454 8999999983 3356777776544444444 777788876 76
Q ss_pred EEEeC-----CcCceeeEE-eecC-cceEEEEEeecC--CeEEEEecCCCCeEEEEecC-CCCeEEEEEe---c------
Q psy505 77 LFSLN-----SIDTLEQIY-ENSQ-EDVCIVERLFSS--SLVAVVSLSSPRKLTVCHFK-RGSEICNYSF---S------ 137 (161)
Q Consensus 77 iwd~~-----~~~~~~~~~-~~~~-~~~~v~~~~fs~--~~~~~~s~~~d~~i~iWD~~-~~~~i~~l~~---~------ 137 (161)
.+|.+ ++..+ ... .++- ..+.=+.+...+ .+..++|+-.+++..|||.+ +.+.+..+.- +
T Consensus 205 ~~da~p~~~~~~~~v-~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG~~s~~Vydr~~~~~~vg~f~Ig~~~~idgv~ 283 (355)
T 3amr_A 205 KFSAEPDGGSNGTVI-DRADGRHLTRDIEGLTIYYAADGKGYLMASSQGNSSYAIYDRQGKNKYVADFRITDGPETDGTS 283 (355)
T ss_dssp EEECSTTSCSCCEEE-EEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGGGTEEEEEESSTTCCEEEEEEECCCSSSCCCC
T ss_pred EEeCCcCCCCCceEE-EEecCCccccCcceEEEEecCCCCEEEEEEcCCCCEEEEEECCCCCcEEEEEEecCCCCceeee
Confidence 66754 12222 111 1211 122222233244 35677877667899999997 7788888751 1
Q ss_pred --C--ceEEEEEC---CcEEEEEecc
Q psy505 138 --N--TILAVKLN---RKKEEEEDEE 156 (161)
Q Consensus 138 --~--~V~~v~~~---~~~~vv~~~~ 156 (161)
+ .|.++.+. |.++.|+-++
T Consensus 284 eTDG~~v~~~~lG~~fP~Gl~V~qDg 309 (355)
T 3amr_A 284 DTDGIDVLGFGLGPEYPFGIFVAQDG 309 (355)
T ss_dssp SCCCEEEECSCCSTTCTTCEEEEEES
T ss_pred ccCcceEEccccCCCCCCcEEEEecC
Confidence 1 24555554 4577777655
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=95.06 E-value=0.71 Score=34.10 Aligned_cols=135 Identities=6% Similarity=-0.056 Sum_probs=74.0
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCcee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
....++++|++..|..+... .+.|..+|+.++.....+...-....+++ ++.+-...+ |.+++..... ..
T Consensus 37 ~~~gi~~d~~~~~ly~~d~~-~~~I~~~~~~g~~~~~~~~~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g~~-~~ 114 (267)
T 1npe_A 37 VIIGLAFDCVDKVVYWTDIS-EPSIGRASLHGGEPTTIIRQDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDGTQ-RR 114 (267)
T ss_dssp EEEEEEEETTTTEEEEEETT-TTEEEEEESSSCCCEEEECTTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS-CE
T ss_pred cEEEEEEecCCCEEEEEECC-CCEEEEEecCCCCcEEEEECCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCCCC-EE
Confidence 34577888854444333442 78999999987654433432223345554 333444445 8888885432 22
Q ss_pred eEEeecCcceEEEEEeecC-CeEEEEecCC--CCeEEEEecCCCCeEEEEEe--cCceEEEEECCc--EEEEEec
Q psy505 88 QIYENSQEDVCIVERLFSS-SLVAVVSLSS--PRKLTVCHFKRGSEICNYSF--SNTILAVKLNRK--KEEEEDE 155 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~--d~~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~~--~~vv~~~ 155 (161)
.+...... .-..++++| ++...++... .+.|..++... +....+.. -....+++++|+ ++.++..
T Consensus 115 ~~~~~~~~--~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~ 186 (267)
T 1npe_A 115 VLFDTGLV--NPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-TNRRILAQDNLGLPNGLTFDAFSSQLCWVDA 186 (267)
T ss_dssp EEECSSCS--SEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-CCCEEEECTTCSCEEEEEEETTTTEEEEEET
T ss_pred EEEECCCC--CccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-CCcEEEEECCCCCCcEEEEcCCCCEEEEEEC
Confidence 22221111 135678887 4554444422 35788888753 33333321 245778899874 5666554
|
| >4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A* | Back alignment and structure |
|---|
Probab=94.97 E-value=0.9 Score=39.35 Aligned_cols=133 Identities=13% Similarity=0.099 Sum_probs=81.7
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeec--------cCccceeee-----e-EEEecCCc-eEEEEe
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA--------HDSPLAALA-----S-LSVGTKSG-YRLFSL 80 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~--------H~~~V~~l~-----~-lasgs~dg-iriwd~ 80 (161)
.|.++..+++|.+.+.+. +|-+..||..+++..+.... ....|.++. . |-.|+.++ +..||.
T Consensus 358 ~V~~i~~d~~g~lWiGt~---~~Gl~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~~lWigt~~~Gl~~~d~ 434 (795)
T 4a2l_A 358 VVSCIVEDKDKNLWIGTN---DGGLNLYNPITQRFTSYTLQEDESARGIGSNNIKAVYVDEKKSLVYIGTHAGGLSILHR 434 (795)
T ss_dssp SEEEEEECTTSCEEEEES---SSCEEEECTTTCCEEEECCC------CCSCSCEEEEEEETTTTEEEEEETTTEEEEEET
T ss_pred eeEEEEECCCCCEEEEEC---CCCeEEEcCCCCcEEEEecCCCCcccCCCCccEEEEEEcCCCCEEEEEeCcCceeEEeC
Confidence 488998888887766432 56789999887765433211 235677776 4 88888755 999999
Q ss_pred CCcCceeeEEeec--CcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe--------cCceEEEEECCc-E
Q psy505 81 NSIDTLEQIYENS--QEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF--------SNTILAVKLNRK-K 149 (161)
Q Consensus 81 ~~~~~~~~~~~~~--~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~--------~~~V~~v~~~~~-~ 149 (161)
.+++ +..+.... .....+.++...+++...++.. +.|.+||.++++.. .+.. ...|.++...++ .
T Consensus 435 ~~~~-~~~~~~~~~~l~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~-~~~~~~~~~~~~~~~i~~i~~d~~g~ 510 (795)
T 4a2l_A 435 NSGQ-VENFNQRNSQLVNENVYAILPDGEGNLWLGTL--SALVRFNPEQRSFT-TIEKEKDGTPVVSKQITTLFRDSHKR 510 (795)
T ss_dssp TTCC-EEEECTTTSCCSCSCEEEEEECSSSCEEEEES--SCEEEEETTTTEEE-ECCBCTTCCBCCCCCEEEEEECTTCC
T ss_pred CCCc-EEEeecCCCCcCCCeeEEEEECCCCCEEEEec--CceeEEeCCCCeEE-EccccccccccCCceEEEEEECCCCC
Confidence 8765 32222100 0112466777776655444432 46999999887643 2221 246888877665 3
Q ss_pred EEEEec
Q psy505 150 EEEEDE 155 (161)
Q Consensus 150 ~vv~~~ 155 (161)
+-+.+.
T Consensus 511 lWigt~ 516 (795)
T 4a2l_A 511 LWIGGE 516 (795)
T ss_dssp EEEEES
T ss_pred EEEEeC
Confidence 444443
|
| >1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1 | Back alignment and structure |
|---|
Probab=94.87 E-value=0.81 Score=33.78 Aligned_cols=135 Identities=4% Similarity=-0.096 Sum_probs=70.5
Q ss_pred eeEEeecCCCc-eEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecC--Cc-eEEEEeCCcC
Q psy505 16 GICCLCVNSDN-CYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTK--SG-YRLFSLNSID 84 (161)
Q Consensus 16 ~v~~~~~~~d~-~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~--dg-iriwd~~~~~ 84 (161)
....++++|++ ...++-.. .+.|.++|+........+...-..-+.++ ++.+... .+ |..++... .
T Consensus 80 ~p~~ia~d~~~~~lyv~d~~--~~~I~~~~~~g~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg-~ 156 (267)
T 1npe_A 80 SPEGIALDHLGRTIFWTDSQ--LDRIEVAKMDGTQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDG-T 156 (267)
T ss_dssp CEEEEEEETTTTEEEEEETT--TTEEEEEETTSCSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTS-C
T ss_pred CccEEEEEecCCeEEEEECC--CCEEEEEEcCCCCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCC-C
Confidence 45567777754 34444332 68899999875433222222112334444 2333322 34 77777643 3
Q ss_pred ceeeEEeecCcceEEEEEeecCC-eEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCcEEEEEec
Q psy505 85 TLEQIYENSQEDVCIVERLFSSS-LVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~-~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~~vv~~~ 155 (161)
....+...... .-..++++++ ....++....+.|.++|...+.....+.......++++..+.+.++..
T Consensus 157 ~~~~~~~~~~~--~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g~~~~~~~~~~~~P~gi~~d~~~lyva~~ 226 (267)
T 1npe_A 157 NRRILAQDNLG--LPNGLTFDAFSSQLCWVDAGTHRAECLNPAQPGRRKVLEGLQYPFAVTSYGKNLYYTDW 226 (267)
T ss_dssp CCEEEECTTCS--CEEEEEEETTTTEEEEEETTTTEEEEEETTEEEEEEEEECCCSEEEEEEETTEEEEEET
T ss_pred CcEEEEECCCC--CCcEEEEcCCCCEEEEEECCCCEEEEEecCCCceEEEecCCCCceEEEEeCCEEEEEEC
Confidence 22222211111 2356788874 444555556679999999754432222222334566666667777653
|
| >2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A* | Back alignment and structure |
|---|
Probab=94.69 E-value=0.09 Score=44.47 Aligned_cols=52 Identities=15% Similarity=0.032 Sum_probs=38.8
Q ss_pred cceEEEEEcCCCCceeeeeccCccceee--e----eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAAL--A----SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l--~----~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
+|.|..||+.+++.+..++... ++.+. . .+..++.|| ++.||.++|+.+.++
T Consensus 443 ~g~l~a~D~~tG~~~W~~~~~~-~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~lw~~ 501 (571)
T 2ad6_A 443 MGQIRAFDLTTGKAKWTKWEKF-AAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESS-CCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred CCeEEEEECCCCCEEEEecCCC-CccceeEEECCCEEEEEcCCCeEEEEECCCCCEEEEE
Confidence 6899999999999988876432 22221 1 566688999 999999999876444
|
| >1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1 | Back alignment and structure |
|---|
Probab=94.62 E-value=0.41 Score=41.13 Aligned_cols=107 Identities=11% Similarity=0.027 Sum_probs=64.7
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccc-----------eeee----eEEEecCCc-eEEEEeCCcCceee
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPL-----------AALA----SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V-----------~~l~----~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
++...+. +. ++.|.-+|..+|+.+..++...... .+++ .+..++.|+ +.-+|.++|+.+-+
T Consensus 66 ~g~vyv~-~~--~~~v~AlD~~tG~~~W~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~~~dg~l~alD~~tG~~~W~ 142 (668)
T 1kv9_A 66 DGVIYTS-MS--WSRVIAVDAASGKELWRYDPEVAKVKARTSCCDAVNRGVALWGDKVYVGTLDGRLIALDAKTGKAIWS 142 (668)
T ss_dssp TTEEEEE-EG--GGEEEEEETTTCCEEEEECCCCCGGGGGGCTTCSCCCCCEEEBTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCEEEEE-CC--CCeEEEEECCCChhceEECCCCCccccccccccCCccceEEECCEEEEEcCCCEEEEEECCCCCEeee
Confidence 4544444 33 7899999999999988886443211 1222 677788888 99999999986533
Q ss_pred EEeecCc-ceEEE-EEeecCCeEEEEecC-----CCCeEEEEecCCCCeEEEEE
Q psy505 89 IYENSQE-DVCIV-ERLFSSSLVAVVSLS-----SPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 89 ~~~~~~~-~~~v~-~~~fs~~~~~~~s~~-----~d~~i~iWD~~~~~~i~~l~ 135 (161)
...+... ...+. ..... ++..+++.+ .++.|..+|.++|+.+=++.
T Consensus 143 ~~~~~~~~~~~~~~~P~v~-~~~v~vg~~~~~~~~~g~v~a~D~~tG~~~W~~~ 195 (668)
T 1kv9_A 143 QQTTDPAKPYSITGAPRVV-KGKVIIGNGGAEYGVRGFVSAYDADTGKLAWRFY 195 (668)
T ss_dssp EECSCTTSSCBCCSCCEEE-TTEEEECCBCTTTCCBCEEEEEETTTCCEEEEEE
T ss_pred eccCCCCCcceecCCCEEE-CCEEEEeCCCCCcCCCCEEEEEECCCCcEEEEec
Confidence 2221100 00000 00011 344455432 25789999999999886664
|
| >3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A | Back alignment and structure |
|---|
Probab=94.22 E-value=1.7 Score=34.77 Aligned_cols=125 Identities=9% Similarity=0.163 Sum_probs=73.6
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----e--------EEEec--C--Cc-eEEEEe--CCcCc
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----S--------LSVGT--K--SG-YRLFSL--NSIDT 85 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~--------lasgs--~--dg-iriwd~--~~~~~ 85 (161)
....++...- .+-+.++|+ +|+.++.+.+ +.++.|. + +|.++ . ++ +++|++ .++ .
T Consensus 39 ~~s~ii~t~k--~~gL~Vydl-~G~~l~~~~~--g~~nnVD~r~~~~l~g~~~dla~as~R~~~~n~l~vf~iDp~~~-~ 112 (355)
T 3amr_A 39 QNSKLITTNK--KSGLVVYSL-DGKMLHSYNT--GKLNNVDIRYDFPLNGKKVDIAAASNRSEGKNTIEIYAIDGKNG-T 112 (355)
T ss_dssp GGCEEEEEET--TTEEEEEET-TSCEEEEECC--SCEEEEEEEEEEEETTEEEEEEEEEECSTTCCEEEEEEECTTTC-C
T ss_pred CccEEEEEcC--CCCEEEEcC-CCcEEEEccC--CCcccEEEecccccCCceEeEEEEeCCCCCCCeEEEEEECCCCC-c
Confidence 3344443333 678999999 7899888874 4455544 2 33333 3 45 999977 343 2
Q ss_pred eeeEEe-----ecC-cceEEEEEeecC-C--eEEEEecCCCCeEEEEec-------CCCCeEEEEEecCceEEEEECCc-
Q psy505 86 LEQIYE-----NSQ-EDVCIVERLFSS-S--LVAVVSLSSPRKLTVCHF-------KRGSEICNYSFSNTILAVKLNRK- 148 (161)
Q Consensus 86 ~~~~~~-----~~~-~~~~v~~~~fs~-~--~~~~~s~~~d~~i~iWD~-------~~~~~i~~l~~~~~V~~v~~~~~- 148 (161)
+..+-. +.. ...+=.++.-+| . ..++++. .++.+..|++ .+++.+.++...+++-++...+.
T Consensus 113 l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~-k~G~~~q~~l~~~~~g~~~~~lVR~f~lgsq~EgcvvDd~~ 191 (355)
T 3amr_A 113 LQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTG-KEGEFEQYELKADKNGYISGKKVRAFKMNSQTEGMAADDEY 191 (355)
T ss_dssp EEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEEC-SSSEEEEEEEEECTTSCEEEEEEEEEECSSCEEEEEEETTT
T ss_pred eeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEEC-CCCeEEEEEEEeCCCCcccceEEEEecCCCCcceEEEcCCC
Confidence 432211 010 111112332255 2 3567766 4578988888 33466777777889999999873
Q ss_pred -EEEEEecc
Q psy505 149 -KEEEEDEE 156 (161)
Q Consensus 149 -~~vv~~~~ 156 (161)
.|.+..++
T Consensus 192 g~Lyv~eEd 200 (355)
T 3amr_A 192 GRLYIAEED 200 (355)
T ss_dssp TEEEEEETT
T ss_pred CeEEEeccc
Confidence 66666654
|
| >1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A | Back alignment and structure |
|---|
Probab=93.85 E-value=0.49 Score=40.31 Aligned_cols=109 Identities=11% Similarity=0.014 Sum_probs=57.1
Q ss_pred EeecCC-CceEEEEcCCCCc---------ceEEEEEcCCCCc--eeeeec-cCccceeee------eEEEecCCc--eEE
Q psy505 19 CLCVNS-DNCYLAYPGSNSI---------GEVQIFDADNLHA--KTMIPA-HDSPLAALA------SLSVGTKSG--YRL 77 (161)
Q Consensus 19 ~~~~~~-d~~~la~~g~~~d---------g~v~iWd~~~~~~--~~~l~~-H~~~V~~l~------~lasgs~dg--iri 77 (161)
+.++.| +|.+++.+|...+ ..+.+||+.+++. +..+.. +.....+++ +++.|+.++ +.+
T Consensus 190 ~~av~~~~g~l~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~lyv~GG~~~~~v~~ 269 (656)
T 1k3i_A 190 AAAIEPTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSL 269 (656)
T ss_dssp EEEEETTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEE
T ss_pred eEEEEecCCEEEEEecccccccccCCCCeEEEEEEeCCCCcEEeCcccCCCCCCccccccCCCCCCEEEeCCCCCCceEE
Confidence 334455 7888888764211 1689999998863 223322 222222222 677777544 999
Q ss_pred EEeCCcCceeeEEeecCcceEEEEEeecC-CeEEEEecCCC-----CeEEEEecCCCC
Q psy505 78 FSLNSIDTLEQIYENSQEDVCIVERLFSS-SLVAVVSLSSP-----RKLTVCHFKRGS 129 (161)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d-----~~i~iWD~~~~~ 129 (161)
||..+.+ -.+.-....... -..++.-+ +.+++++|..+ +.+.+||.++++
T Consensus 270 yd~~t~~-W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~yd~~t~~ 325 (656)
T 1k3i_A 270 YDSSSDS-WIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 325 (656)
T ss_dssp EEGGGTE-EEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred ecCcCCc-eeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceEeCCCCCc
Confidence 9987643 111111111000 01222333 33445554222 579999998875
|
| >1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1 | Back alignment and structure |
|---|
Probab=93.56 E-value=0.14 Score=43.39 Aligned_cols=52 Identities=27% Similarity=0.310 Sum_probs=39.5
Q ss_pred cceEEEEEcCCCCceeeeeccCcccee--ee----eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAA--LA----SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~--l~----~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
+|.|.-||+.+|+.+.....+. ++.+ +. ++..|+.|| ++.||.++|+.+-++
T Consensus 465 ~G~l~A~D~~tG~~~W~~~~~~-~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~lW~~ 523 (582)
T 1flg_A 465 VGSLRAMDPVSGKVVWEHKEHL-PLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWKF 523 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESS-CCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cceEEEEECCCCCEEEEecCCC-CCcccceEeCCCEEEEECCCCcEEEEECCCCCEEEEe
Confidence 6899999999999888776443 2221 22 667799999 999999999866443
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=93.50 E-value=2.1 Score=36.92 Aligned_cols=134 Identities=10% Similarity=0.030 Sum_probs=77.9
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeee---eccCccceeee-----eEEEecCC-ceEEEEeCCcCce
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMI---PAHDSPLAALA-----SLSVGTKS-GYRLFSLNSIDTL 86 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l---~~H~~~V~~l~-----~lasgs~d-giriwd~~~~~~~ 86 (161)
.|.++..+++|.+.+.+. ++-+..||..+++..... ......|.++. .|-.|+.+ |+..+|.++++ +
T Consensus 364 ~v~~i~~d~~g~lWigt~---~~Gl~~~~~~~~~~~~~~~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~~-~ 439 (781)
T 3v9f_A 364 VVSSVCDDGQGKLWIGTD---GGGINVFENGKRVAIYNKENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLKK-F 439 (781)
T ss_dssp CEEEEEECTTSCEEEEEB---SSCEEEEETTEEEEECC-----CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSCE-E
T ss_pred ceEEEEEcCCCCEEEEeC---CCcEEEEECCCCeEEEccCCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCCc-E
Confidence 488888888887666432 355888898765432211 12345677776 44446664 49899987754 3
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe------cCceEEEEECCc-EEEEEec
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF------SNTILAVKLNRK-KEEEEDE 155 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~------~~~V~~v~~~~~-~~vv~~~ 155 (161)
............+.++...+++...++.. +.|..||.++++....... ...|.++...++ .+-+.+.
T Consensus 440 ~~~~~~~~~~~~v~~i~~d~~g~lwigt~--~Gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~i~~d~~g~lWigt~ 513 (781)
T 3v9f_A 440 QIIELEKNELLDVRVFYEDKNKKIWIGTH--AGVFVIDLASKKVIHHYDTSNSQLLENFVRSIAQDSEGRFWIGTF 513 (781)
T ss_dssp EECCSTTTCCCCEEEEEECTTSEEEEEET--TEEEEEESSSSSCCEEECTTTSSCSCSCEEEEEECTTCCEEEEES
T ss_pred EEeccCCCCCCeEEEEEECCCCCEEEEEC--CceEEEeCCCCeEEecccCcccccccceeEEEEEcCCCCEEEEEc
Confidence 22211001122466777777665555443 4799999988765322211 246888877665 4444443
|
| >2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A* | Back alignment and structure |
|---|
Probab=92.38 E-value=2.8 Score=31.77 Aligned_cols=137 Identities=9% Similarity=-0.048 Sum_probs=76.5
Q ss_pred eEEeecCC-CceEEEEcCC---------------CCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCC
Q psy505 17 ICCLCVNS-DNCYLAYPGS---------------NSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKS 73 (161)
Q Consensus 17 v~~~~~~~-d~~~la~~g~---------------~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~d 73 (161)
...++++| +|...++... ..+|.|..+|..+++....... -..-+.++ ++++-+.+
T Consensus 128 p~~i~~d~~~G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~~~~~-~~~p~gia~~~dg~~lyv~d~~~ 206 (322)
T 2fp8_A 128 LYAVTVDQRTGIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTLLLKE-LHVPGGAEVSADSSFVLVAEFLS 206 (322)
T ss_dssp EEEEEECTTTCCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEEEEEE-ESCCCEEEECTTSSEEEEEEGGG
T ss_pred cceEEEecCCCEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEEeccC-CccCcceEECCCCCEEEEEeCCC
Confidence 45677888 8876665321 0147788899877654322221 11223333 33333444
Q ss_pred c-eEEEEeCCcC--ceeeEEeecCcceEEEEEeecCCeEEEEecCC----------CCeEEEEecCCCCeEEEEEec---
Q psy505 74 G-YRLFSLNSID--TLEQIYENSQEDVCIVERLFSSSLVAVVSLSS----------PRKLTVCHFKRGSEICNYSFS--- 137 (161)
Q Consensus 74 g-iriwd~~~~~--~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~----------d~~i~iWD~~~~~~i~~l~~~--- 137 (161)
+ |..|++.... .. +.+.... . -..+++.+++...++... .+.|..+|.. |+.+..+..+
T Consensus 207 ~~I~~~~~~~~~~~~~-~~~~~~~-g--P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~-G~~~~~~~~~~g~ 281 (322)
T 2fp8_A 207 HQIVKYWLEGPKKGTA-EVLVKIP-N--PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF-GNILEVIPLPPPF 281 (322)
T ss_dssp TEEEEEESSSTTTTCE-EEEEECS-S--EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT-SCEEEEEECCTTT
T ss_pred CeEEEEECCCCcCCcc-ceEEeCC-C--CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC-CCEEEEEECCCCC
Confidence 5 9999986421 11 2222111 1 345678887654454322 3568888874 8877777643
Q ss_pred --CceEEEEECCcEEEEEe--cccee
Q psy505 138 --NTILAVKLNRKKEEEED--EEEEK 159 (161)
Q Consensus 138 --~~V~~v~~~~~~~vv~~--~~~~~ 159 (161)
..+.++.+..+.|.+.. .++|.
T Consensus 282 ~~~~~~~~~~~~g~L~v~~~~~~~i~ 307 (322)
T 2fp8_A 282 AGEHFEQIQEHDGLLYIGTLFHGSVG 307 (322)
T ss_dssp TTSCCCEEEEETTEEEEECSSCSEEE
T ss_pred ccccceEEEEeCCEEEEeecCCCceE
Confidence 35777777767777763 44444
|
| >3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=92.03 E-value=4.1 Score=32.87 Aligned_cols=135 Identities=5% Similarity=-0.035 Sum_probs=69.5
Q ss_pred EeecCC--CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc----eEEEEeCCcCc
Q psy505 19 CLCVNS--DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG----YRLFSLNSIDT 85 (161)
Q Consensus 19 ~~~~~~--d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg----iriwd~~~~~~ 85 (161)
.++++| ++.+.++ .. .+.|+.+|+.+++.. .+.........++ ++++...++ .-+|-...+..
T Consensus 141 ~lavdp~~~g~Lyv~-d~--~~~I~~id~~~~~v~-~~~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~~~~~g~~ 216 (430)
T 3tc9_A 141 WLSFDPKNHNHLYLV-GE--QHPTRLIDFEKEYVS-TVYSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYILTRESGF 216 (430)
T ss_dssp EEEEETTEEEEEEEE-EB--TEEEEEEETTTTEEE-EEECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEEEEGGGTS
T ss_pred EEEECCCCCCeEEEE-eC--CCcEEEEECCCCEEE-EEecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEEEeCCCce
Confidence 445565 2443343 22 278999999876543 3332333345555 333333221 22233333332
Q ss_pred ee-eEEeecCcceEEEEEeecC-CeEEEEecCCCCeEEEEecCCCCeEEEEEec--CceEEEEECCcE--EEEEe--ccc
Q psy505 86 LE-QIYENSQEDVCIVERLFSS-SLVAVVSLSSPRKLTVCHFKRGSEICNYSFS--NTILAVKLNRKK--EEEED--EEE 157 (161)
Q Consensus 86 ~~-~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~--~~V~~v~~~~~~--~vv~~--~~~ 157 (161)
.. ..+..... ...++++| ++...++....+.|..+|...+......... ..-..++|+|++ +.++. .++
T Consensus 217 ~~~~~l~~~~~---p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~~~~~~~~~~~~~P~gia~~pdG~~lyv~d~~~~~ 293 (430)
T 3tc9_A 217 KVITELTKGQN---CNGAETHPINGELYFNSWNAGQVFRYDFTTQETTPLFTIQDSGWEFHIQFHPSGNYAYIVVVNQHY 293 (430)
T ss_dssp CSEEEEEECSS---CCCEEECTTTCCEEEEETTTTEEEEEETTTTEEEEEEECSSSSCCEEEEECTTSSEEEEEETTTTE
T ss_pred eeeeeeccCCC---ceEEEEeCCCCEEEEEECCCCEEEEEECCCCcEEEEEEcCCCCcceeEEEcCCCCEEEEEECCCCE
Confidence 10 11111111 23456788 6766666656678999999866542222322 357789999973 66663 345
Q ss_pred eee
Q psy505 158 EKK 160 (161)
Q Consensus 158 ~~~ 160 (161)
|++
T Consensus 294 I~~ 296 (430)
T 3tc9_A 294 ILR 296 (430)
T ss_dssp EEE
T ss_pred EEE
Confidence 554
|
| >3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A | Back alignment and structure |
|---|
Probab=91.60 E-value=2.5 Score=34.92 Aligned_cols=63 Identities=8% Similarity=0.042 Sum_probs=43.6
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc------------eeeeec------cCccceeee---------eEEE
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA------------KTMIPA------HDSPLAALA---------SLSV 69 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~------------~~~l~~------H~~~V~~l~---------~las 69 (161)
+.-+..||+|.+||..| +.+|.|-.+..+.. ...++- ...+|..+- +|++
T Consensus 68 i~qlvlSpsG~lLAl~g---~~~V~Vv~LP~~~~~~~~~~~~~~~q~~ty~l~~~~~~~~s~I~qVlWHPl~~~ds~LVV 144 (452)
T 3pbp_A 68 TFHVISSTSGDLLCLFN---DNEIFVMEVPWGYSNVEDVSIQDAFQIFHYSIDEEEVGPKSSIKKVLFHPKSYRDSCIVV 144 (452)
T ss_dssp TCEEEECTTSSEEEEEC---SSEEEEEECCTTCSCCCCHHHHHTTEEEEEEGGGCC--CCCCEEEEEECTTBGGGCEEEE
T ss_pred eeEEEECCCCCEEEEec---CCeEEEEEecCccccCcccccccccceeEEEcCCcccCCCCceeEEEeccccCCCCeEEE
Confidence 55677899999999987 57899988884321 112321 234566555 6777
Q ss_pred ecCCc-eEEEEeCC
Q psy505 70 GTKSG-YRLFSLNS 82 (161)
Q Consensus 70 gs~dg-iriwd~~~ 82 (161)
=..|+ ||+||+..
T Consensus 145 LtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 145 LKEDDTITMFDILN 158 (452)
T ss_dssp EETTSCEEEEETTC
T ss_pred EecCCEEEEEEccc
Confidence 77787 99999975
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=91.46 E-value=2.4 Score=36.09 Aligned_cols=63 Identities=10% Similarity=-0.034 Sum_probs=37.9
Q ss_pred CCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecC
Q psy505 72 KSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSN 138 (161)
Q Consensus 72 ~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~ 138 (161)
.+| +.-||+.+|+.+-+...+. +..--.+.- ..+++++ ++.|+.++.||.++|+.+-++....
T Consensus 451 ~~G~l~A~D~~tG~~~W~~~~~~--~~~~g~~~t-agg~vf~-gt~dg~l~A~D~~tG~~lW~~~l~~ 514 (599)
T 1w6s_A 451 GLGQIKAYNAITGDYKWEKMERF--AVWGGTMAT-AGDLVFY-GTLDGYLKARDSDTGDLLWKFKIPS 514 (599)
T ss_dssp CCEEEEEECTTTCCEEEEEEESS--CCCSBCEEE-TTTEEEE-ECTTSEEEEEETTTCCEEEEEECSS
T ss_pred CcCeEEEEECCCCCEEeEecCCC--CccCcceEe-cCCEEEE-ECCCCeEEEEECCCCCEEEEeeCCC
Confidence 347 9999999987543222111 100001122 2344444 3468899999999999998876543
|
| >3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=90.88 E-value=4.7 Score=31.40 Aligned_cols=134 Identities=5% Similarity=-0.054 Sum_probs=70.5
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCcee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
...++++++.+..|-.+... .+.|+.+++.++.....+........+++ ++.+-+..+ |.+.++.... ..
T Consensus 74 ~~~~l~~d~~~~~ly~~D~~-~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG~~-~~ 151 (349)
T 3v64_C 74 NAIALDFHHRRELVFWSDVT-LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RK 151 (349)
T ss_dssp CEEEEEEETTTTEEEEEETT-TTEEEEEETTSCSCEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTSCS-CE
T ss_pred ceEEEEEeccccEEEEEecc-CCceEEEecCCCCceEEEeCCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCCCc-eE
Confidence 34677777643333333332 68899999887654443332223344555 333444444 8888885432 22
Q ss_pred eEEeecCcceEEEEEeecC-CeEEEEecCCC-CeEEEEecCCCCeEEEEEe--cCceEEEEECC--cEEEEEe
Q psy505 88 QIYENSQEDVCIVERLFSS-SLVAVVSLSSP-RKLTVCHFKRGSEICNYSF--SNTILAVKLNR--KKEEEED 154 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d-~~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~--~~~vv~~ 154 (161)
.+...... .-..++++| ++...++.... +.|...|..... ...+.. -....+++++| .+|.++.
T Consensus 152 ~l~~~~l~--~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 152 VLLWQSLE--KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp EEECTTCS--CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEESCCSSCSCEEEEEEETTTTEEEEEE
T ss_pred EEEeCCCC--CcceEEEecCcCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCcceEEEeCCCCEEEEEE
Confidence 23222111 124667776 45545554444 678888875332 222211 23467788875 3666654
|
| >2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major} | Back alignment and structure |
|---|
Probab=90.46 E-value=8.1 Score=33.42 Aligned_cols=107 Identities=11% Similarity=0.133 Sum_probs=58.0
Q ss_pred eEEeecCCCceEEEEcCCC-CcceEEEEEcCCCC-ce--eee-eccCccceeee------eEEEecCC--c-eEEEE--e
Q psy505 17 ICCLCVNSDNCYLAYPGSN-SIGEVQIFDADNLH-AK--TMI-PAHDSPLAALA------SLSVGTKS--G-YRLFS--L 80 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~-~dg~v~iWd~~~~~-~~--~~l-~~H~~~V~~l~------~lasgs~d--g-iriwd--~ 80 (161)
...+.++|||.+|+..... ....|.++|+.++. .. ..+ ....++..++. ++.....+ + .+||. +
T Consensus 273 ~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~ 352 (751)
T 2xe4_A 273 SAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPR 352 (751)
T ss_dssp EEEEEECTTSSEEEEEEECSSCEEEEEEESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEET
T ss_pred EEEEEECCCCCEEEEEecCCCCceEEEEECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcC
Confidence 3466789999988775421 13468899998763 22 333 34445555553 33344443 3 55554 4
Q ss_pred CCcCceee-EEeecCcceEEEEEeecCCeEEEEecCCCC--eEEEEec
Q psy505 81 NSIDTLEQ-IYENSQEDVCIVERLFSSSLVAVVSLSSPR--KLTVCHF 125 (161)
Q Consensus 81 ~~~~~~~~-~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~--~i~iWD~ 125 (161)
.++..... ++. +.....+..+.+..+.+++... .++ .|.++|+
T Consensus 353 ~~~~~~~~~li~-~~~~~~l~~~~~~~~~lv~~~~-~~g~~~l~~~dl 398 (751)
T 2xe4_A 353 GQPSDWSHVLVD-HSEDVFMESIAVRSNYLVVAGR-RAGLTRIWTMMA 398 (751)
T ss_dssp TSTTCCCCEEEC-CCSSEEEEEEEECSSEEEEEEE-ETTEEEEEEEEC
T ss_pred CCcccceeeEEC-CCCCcEEEEEEEECCEEEEEEE-eCCEEEEEEEec
Confidence 43222223 332 3334456667777666655443 333 4677775
|
| >3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=90.19 E-value=8.3 Score=33.15 Aligned_cols=136 Identities=10% Similarity=-0.050 Sum_probs=77.4
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee---------ccCccceeee-----eEEEecCC-ceEEEE
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP---------AHDSPLAALA-----SLSVGTKS-GYRLFS 79 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~---------~H~~~V~~l~-----~lasgs~d-giriwd 79 (161)
..|.++..+++|.+.+.+- ++-|..++..++....... -....|.++. .|-.|+.+ |+..||
T Consensus 313 ~~v~~i~~D~~g~lWigt~---~~Gl~~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~~i~~d~~g~lWigt~~~Gl~~~~ 389 (781)
T 3v9f_A 313 ASARYIFQDSFNNIWIGTW---GGGINFISNAPPTFHTWSYSPTQMNESSLSNKVVSSVCDDGQGKLWIGTDGGGINVFE 389 (781)
T ss_dssp SCEEEEEECSSCCEEEEEB---SSCEEEECSSCCSCEEEC----CCCSSCCSSSCEEEEEECTTSCEEEEEBSSCEEEEE
T ss_pred CeEEEEEEeCCCCEEEEec---CCeEEEeCCCCCcceeeccCccccccCCCCCcceEEEEEcCCCCEEEEeCCCcEEEEE
Confidence 3588888888887666532 4668888887654322211 0234577776 45556754 599999
Q ss_pred eCCcCceeeEEee-cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe----cCceEEEEECCc-EEEEE
Q psy505 80 LNSIDTLEQIYEN-SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF----SNTILAVKLNRK-KEEEE 153 (161)
Q Consensus 80 ~~~~~~~~~~~~~-~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~----~~~V~~v~~~~~-~~vv~ 153 (161)
..++. +...... ......|.++...+++...++. .++.|..+|.++++. ..+.. ...|.++...++ .+-+.
T Consensus 390 ~~~~~-~~~~~~~~~~~~~~v~~i~~d~~g~lWigt-~~~Gl~~~~~~~~~~-~~~~~~~~~~~~v~~i~~d~~g~lwig 466 (781)
T 3v9f_A 390 NGKRV-AIYNKENRELLSNSVLCSLKDSEGNLWFGT-YLGNISYYNTRLKKF-QIIELEKNELLDVRVFYEDKNKKIWIG 466 (781)
T ss_dssp TTEEE-EECC-----CCCSBEEEEEECTTSCEEEEE-TTEEEEEECSSSCEE-EECCSTTTCCCCEEEEEECTTSEEEEE
T ss_pred CCCCe-EEEccCCCCCCCcceEEEEECCCCCEEEEe-ccCCEEEEcCCCCcE-EEeccCCCCCCeEEEEEECCCCCEEEE
Confidence 86542 2111100 0011246677777655434433 235799999887764 33321 356888887764 55554
Q ss_pred ecc
Q psy505 154 DEE 156 (161)
Q Consensus 154 ~~~ 156 (161)
+.+
T Consensus 467 t~~ 469 (781)
T 3v9f_A 467 THA 469 (781)
T ss_dssp ETT
T ss_pred ECC
Confidence 443
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=90.17 E-value=4.8 Score=30.34 Aligned_cols=108 Identities=9% Similarity=-0.012 Sum_probs=58.1
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc--eEEEEeCCcCc
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG--YRLFSLNSIDT 85 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg--iriwd~~~~~~ 85 (161)
.....++++|+|.++++... .+.|..||..++ ....+.. .....+++ +++....++ +..+|..+|+
T Consensus 32 ~~pegia~~~~g~lyv~d~~--~~~I~~~d~~g~-~~~~~~~-~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~g~- 106 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHE--VGEIVSITPDGN-QQIHATV-EGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSDGT- 106 (306)
T ss_dssp CCEEEEEECTTSCEEEEETT--TTEEEEECTTCC-EEEEEEC-SSEEEEEEECTTSCEEEEEECTTSCEEEEEECTTSC-
T ss_pred CCcceEEECCCCCEEEEeCC--CCeEEEECCCCc-eEEEEeC-CCCceeEEEcCCCcEEEEeccCCcceEEEEcCCCCe-
Confidence 33456777888887666433 689999998753 3333332 23455665 444433444 5556666765
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG 128 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~ 128 (161)
+..+....... .-..++..++...+++....+.|..+|..++
T Consensus 107 ~~~~~~~~~~~-~~~g~~~~~~~~~~v~d~~~g~i~~~d~~~~ 148 (306)
T 2p4o_A 107 VETLLTLPDAI-FLNGITPLSDTQYLTADSYRGAIWLIDVVQP 148 (306)
T ss_dssp EEEEEECTTCS-CEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred EEEEEeCCCcc-ccCcccccCCCcEEEEECCCCeEEEEeCCCC
Confidence 32232211111 1123333445555555545667888887654
|
| >3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} | Back alignment and structure |
|---|
Probab=89.85 E-value=6.2 Score=31.16 Aligned_cols=134 Identities=5% Similarity=-0.061 Sum_probs=68.9
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCcee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
...++++++.+..|..+... .+.|..+++.++.....+........+++ ++.+-+..+ |.+.++.... ..
T Consensus 117 ~~~gl~~d~~~~~ly~~D~~-~~~I~r~~~~g~~~~~~~~~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~dg~~-~~ 194 (386)
T 3v65_B 117 NAIALDFHHRRELVFWSDVT-LDRILRANLNGSNVEEVVSTGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDGAH-RK 194 (386)
T ss_dssp CEEEEEEETTTTEEEEEETT-TTEEEEEETTSCCEEEEECSSCSCCCCEEEETTTTEEEEEETTTTEEEECBTTSCS-CE
T ss_pred ccEEEEEecCCCeEEEEeCC-CCcEEEEecCCCCcEEEEeCCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCCCCc-eE
Confidence 45577777643333333332 68899999987654333332222334444 333444444 8888875432 22
Q ss_pred eEEeecCcceEEEEEeecC-CeEEEEecCCC-CeEEEEecCCCCeEEEEEe--cCceEEEEECCc--EEEEEe
Q psy505 88 QIYENSQEDVCIVERLFSS-SLVAVVSLSSP-RKLTVCHFKRGSEICNYSF--SNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~-~~~~~~s~~~d-~~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~~--~~vv~~ 154 (161)
.+...... .-..+++.| ++...++.... +.|...|..... ...+.. -....+++|+|+ +|.++.
T Consensus 195 ~l~~~~l~--~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~-~~~~~~~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 195 VLLWQSLE--KPRAIALHPMEGTIYWTDWGNTPRIEASSMDGSG-RRIIADTHLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp EEECSSCS--CEEEEEEETTTTEEEEEECSSSCEEEEEETTSCS-CEEEECSSCSCEEEEEEEGGGTEEEEEE
T ss_pred EeecCCCC--CCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCCC-cEEEEECCCCCeeeEEEeCCCCEEEEEE
Confidence 23222111 124566665 44444444333 678888876432 233321 234677888753 666654
|
| >1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A* | Back alignment and structure |
|---|
Probab=89.25 E-value=0.88 Score=38.80 Aligned_cols=52 Identities=17% Similarity=0.141 Sum_probs=38.2
Q ss_pred cceEEEEEcCCCCceeeeeccCccce-e-ee----eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLA-A-LA----SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~-~-l~----~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
+|.+.-||+.+|+.+...+.. .++. + ++ ++..|+.|| ++.||.++|+.+-+.
T Consensus 452 ~G~l~A~D~~tG~~~W~~~~~-~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~lW~~ 510 (599)
T 1w6s_A 452 LGQIKAYNAITGDYKWEKMER-FAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (599)
T ss_dssp CEEEEEECTTTCCEEEEEEES-SCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cCeEEEEECCCCCEEeEecCC-CCccCcceEecCCEEEEECCCCeEEEEECCCCCEEEEe
Confidence 589999999999988877522 2222 1 22 566689999 999999999866443
|
| >3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ... | Back alignment and structure |
|---|
Probab=89.24 E-value=13 Score=34.15 Aligned_cols=111 Identities=17% Similarity=0.213 Sum_probs=62.4
Q ss_pred ceEEEEEcCCCCceeeee-ccCccceeee----------eEEEec----------CCc-eEEEEeCCcCceeeEEeec-C
Q psy505 38 GEVQIFDADNLHAKTMIP-AHDSPLAALA----------SLSVGT----------KSG-YRLFSLNSIDTLEQIYENS-Q 94 (161)
Q Consensus 38 g~v~iWd~~~~~~~~~l~-~H~~~V~~l~----------~lasgs----------~dg-iriwd~~~~~~~~~~~~~~-~ 94 (161)
+.|++.|..+.+.+..++ .....+.|++ +|+.|+ ..| |.+|++..+ .++.+.+.. .
T Consensus 807 s~i~lidp~t~~~i~~~~l~~nE~~~sv~~v~~~~~~~~~lvVGTa~~~~~e~~~~~Gri~vf~v~~~-kL~lv~~~~v~ 885 (1158)
T 3ei3_A 807 HNLLIIDQHTFEVLHAHQFLQNEYALSLVSCKLGKDPNTYFIVGTAMVYPEEAEPKQGRIVVFQYSDG-KLQTVAEKEVK 885 (1158)
T ss_dssp EEEEEEETTTCCEEEEEECCTTEEEEEEEEECCTTCCCCEEEEEEEECCTTCSSCCCEEEEEEEEETT-EEEEEEEEEES
T ss_pred EEEEEEeCCCCeEEEEEeCCCCcceEEEEEEEEccCCCEEEEEEeeecCCCCCCCCceEEEEEEEECC-EEEEEEEEEcC
Confidence 469999998888765543 2223344444 788777 357 999999743 453333221 2
Q ss_pred cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEE-EEE-ecCc-eEEEEECCcEEEEEe
Q psy505 95 EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEIC-NYS-FSNT-ILAVKLNRKKEEEED 154 (161)
Q Consensus 95 ~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~-~l~-~~~~-V~~v~~~~~~~vv~~ 154 (161)
+++...+ .|. +..+++-+ ++|+|||+...+.+. +.. |+.. +..++...++++|..
T Consensus 886 g~v~al~-~~~--g~Lla~ig--~~l~vy~l~~~~~L~~~~~~~~~i~~~~l~~~~~~I~vgD 943 (1158)
T 3ei3_A 886 GAVYSMV-EFN--GKLLASIN--STVRLYEWTTEKELRTECNHYNNIMALYLKTKGDFILVGD 943 (1158)
T ss_dssp SCEEEEE-EET--TEEEEEET--TEEEEEEECTTSCEEEEEEECCCSCEEEEEEETTEEEEEE
T ss_pred CcCEEEe-eeC--CEEEEEcC--CEEEEEECCCCceEEEEeeccccEEEEEEeccCCEEEEEE
Confidence 3333222 243 34455432 589999998776443 333 3221 334555556665543
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=87.45 E-value=1.5 Score=39.44 Aligned_cols=36 Identities=19% Similarity=0.283 Sum_probs=26.9
Q ss_pred EEEEEeecCC--eEEEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 98 CIVERLFSSS--LVAVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 98 ~v~~~~fs~~--~~~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
.+.+++..++ .+..++ -|+++||||+.+++|+.+..
T Consensus 237 ~~~~~~~~~~~~~lftl~--~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLS--LDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETTTTEEEEEE--TTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCCCcEEEEEE--CCCEEEEEECCCCCeEeeec
Confidence 4566677665 444444 68999999999999998764
|
| >2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus} | Back alignment and structure |
|---|
Probab=87.42 E-value=8.2 Score=29.56 Aligned_cols=140 Identities=8% Similarity=0.043 Sum_probs=65.6
Q ss_pred ceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeee-eccCccceeee-----eEEEecCCc-eEEEEeCCcCcee
Q psy505 15 NGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMI-PAHDSPLAALA-----SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 15 ~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l-~~H~~~V~~l~-----~lasgs~dg-iriwd~~~~~~~~ 87 (161)
..+.+++++|++.+++++.. .+..+-+|-. ++.-..+ ..+...+.++. .+..++.+| +++++...|+.-.
T Consensus 163 ~~~~~~~~~~~~~~~~~g~~--G~~~~S~d~g-G~tW~~~~~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~D~G~tW~ 239 (327)
T 2xbg_A 163 GVMRNLNRSPSGEYVAVSSR--GSFYSTWEPG-QTAWEPHNRTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDPDNSENWG 239 (327)
T ss_dssp CCEEEEEECTTSCEEEEETT--SSEEEEECTT-CSSCEEEECCSSSCEEEEEECTTSCEEEEETTTEEEEEETTEEEEEC
T ss_pred cceEEEEEcCCCcEEEEECC--CcEEEEeCCC-CCceeECCCCCCCccceeEECCCCCEEEEeCCceEEEecCCCCCeeE
Confidence 35778888888888877532 3344555531 2221122 12233444444 222334556 6665322222111
Q ss_pred eEEeec-CcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE----ecCceEEEEE-CCcEEEEEecc-cee
Q psy505 88 QIYENS-QEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS----FSNTILAVKL-NRKKEEEEDEE-EEK 159 (161)
Q Consensus 88 ~~~~~~-~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~----~~~~V~~v~~-~~~~~vv~~~~-~~~ 159 (161)
.....+ .....+..++|.++...++.+. ++.| .+....|+-=..+. .+..+.+|.| ++..++++..+ .|.
T Consensus 240 ~~~~~~~~~~~~~~~v~~~~~~~~~~~g~-~g~i-~~S~DgG~tW~~~~~~~~~~~~~~~v~~~~~~~~~~~G~~G~i~ 316 (327)
T 2xbg_A 240 ELLSPLRRNSVGFLDLAYRTPNEVWLAGG-AGAL-LCSQDGGQTWQQDVDVKKVPSNFYKILFFSPDQGFILGQKGILL 316 (327)
T ss_dssp CCBCTTSSCCSCEEEEEESSSSCEEEEES-TTCE-EEESSTTSSCEECGGGTTSSSCCCEEEEEETTEEEEECSTTEEE
T ss_pred eccCCcccCCcceEEEEecCCCEEEEEeC-CCeE-EEeCCCCcccEEcCccCCCCCCeEEEEEECCCceEEEcCCceEE
Confidence 111110 0112356777876655445442 3455 34444444333332 1356788888 45565555544 443
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=87.32 E-value=12 Score=31.24 Aligned_cols=126 Identities=15% Similarity=0.300 Sum_probs=75.2
Q ss_pred eeEEeecCCCceEEEEcCCC-----CcceEEEEEcCCCCceeeeeccCccceeee-----------eEEEecCCc--eEE
Q psy505 16 GICCLCVNSDNCYLAYPGSN-----SIGEVQIFDADNLHAKTMIPAHDSPLAALA-----------SLSVGTKSG--YRL 77 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~-----~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----------~lasgs~dg--iri 77 (161)
.|.....++|.++++..|.. ..|.+.||..+. +.-+.++||...-.++. +||.=+..| +.|
T Consensus 152 QIInY~~d~~~kW~~l~GI~~~~~~v~G~mQLYS~er-~~sQ~ieGhaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi 230 (494)
T 1bpo_A 152 QIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDR-KVSQPIEGHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHI 230 (494)
T ss_dssp EEEEEEECTTSSEEEEEEEEEETTEEEEEEEEEESTT-CCEEEECCSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEE
T ss_pred eEEEEEECCCCCeEEEEeecccCCcccceEEEeeccc-cccchheeeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEE
Confidence 45566668888888866531 158899999874 55578889876554443 444444444 888
Q ss_pred EEeCCc---C-cee----eEEee--cCcceEEEEEeecC--CeEEEEecCCCCeEEEEecCCCCeEEEEEe-cCceEEEE
Q psy505 78 FSLNSI---D-TLE----QIYEN--SQEDVCIVERLFSS--SLVAVVSLSSPRKLTVCHFKRGSEICNYSF-SNTILAVK 144 (161)
Q Consensus 78 wd~~~~---~-~~~----~~~~~--~~~~~~v~~~~fs~--~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~~V~~v~ 144 (161)
-++.+. . ++. .++-. ..++.++ +|..|+ ..+++++- -+-|+++|+++|.++..-.. .++|.-.+
T Consensus 231 ~Ei~~~~~~~~~f~kk~vdv~fppe~~~DFPv-amqvs~kygviyviTK--~G~i~lyDleTgt~i~~nrIs~~~iF~t~ 307 (494)
T 1bpo_A 231 IEVGTPPTGNQPFPKKAVDVFFPPEAQNDFPV-AMQISEKHDVVFLITK--YGYIHLYDLETGTCIYMNRISGETIFVTA 307 (494)
T ss_dssp EECSCCCTTCCCCCCEEEECCCCTTSTTCCEE-EEEEETTTTEEEEEET--TSEEEEEETTTCCEEEEEECCSSCEEEEE
T ss_pred EEcCCCccCCCCccceeeeeeCCcccccCcee-EEEecccCCEEEEEec--CceEEEEecccceeeeeecccCCceEEec
Confidence 887432 1 111 11100 1123332 344443 56677774 45899999999999866553 35555444
Q ss_pred E
Q psy505 145 L 145 (161)
Q Consensus 145 ~ 145 (161)
-
T Consensus 308 ~ 308 (494)
T 1bpo_A 308 P 308 (494)
T ss_dssp E
T ss_pred c
Confidence 3
|
| >4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B | Back alignment and structure |
|---|
Probab=86.96 E-value=1.8 Score=38.89 Aligned_cols=42 Identities=17% Similarity=0.129 Sum_probs=31.8
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP 55 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~ 55 (161)
.++..+.+++..++..++.+-+. |+++|+|++.+++++.+.+
T Consensus 233 ~~~~~~~~~~~~~~~~~lftl~~--D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 233 RSPNTIISMIFLSTYNVLVMLSL--DYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CCTTCEEEEEEETTTTEEEEEET--TCEEEEEETTTTEEEEEEE
T ss_pred CCcceEEEEeecCCCcEEEEEEC--CCEEEEEECCCCCeEeeec
Confidence 34556677777777777766555 9999999999999887753
|
| >3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=86.40 E-value=12 Score=31.15 Aligned_cols=60 Identities=2% Similarity=-0.119 Sum_probs=38.6
Q ss_pred EEeecC-CeEEEEecCCCCeEEEEecC-------CCCe-----------EEEE-Ee--cCceEEEEECCcE--EEEEe--
Q psy505 101 ERLFSS-SLVAVVSLSSPRKLTVCHFK-------RGSE-----------ICNY-SF--SNTILAVKLNRKK--EEEED-- 154 (161)
Q Consensus 101 ~~~fs~-~~~~~~s~~~d~~i~iWD~~-------~~~~-----------i~~l-~~--~~~V~~v~~~~~~--~vv~~-- 154 (161)
.++.+| ++...++....+.|..+|++ ++.. ...+ .. ...-..++|+|++ +.++.
T Consensus 251 giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~g~~~~l~~~~~~~~p~~ia~~p~G~~lYvaD~~ 330 (496)
T 3kya_A 251 GATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNPNTFKQLFTIADPSWEFQIFIHPTGKYAYFGVIN 330 (496)
T ss_dssp CEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCTTTEEEEEECSSSSCCEEEEECTTSSEEEEEETT
T ss_pred EEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccccccceeEecCCCCCceEEEEcCCCCEEEEEeCC
Confidence 456677 55656666667789999997 5654 2333 22 2456789999984 56663
Q ss_pred ccceee
Q psy505 155 EEEEKK 160 (161)
Q Consensus 155 ~~~~~~ 160 (161)
..+|+|
T Consensus 331 ~h~I~k 336 (496)
T 3kya_A 331 NHYFMR 336 (496)
T ss_dssp TTEEEE
T ss_pred CCEEEE
Confidence 346665
|
| >2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3 | Back alignment and structure |
|---|
Probab=85.47 E-value=9.8 Score=28.55 Aligned_cols=86 Identities=9% Similarity=-0.123 Sum_probs=49.6
Q ss_pred eEEEecCCc-eEEEEeCC-cCce-eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEE--EEec-Cc
Q psy505 66 SLSVGTKSG-YRLFSLNS-IDTL-EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICN--YSFS-NT 139 (161)
Q Consensus 66 ~lasgs~dg-iriwd~~~-~~~~-~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~--l~~~-~~ 139 (161)
++++-+..+ |..||... +..- .+.+.... .-..+++++++...++....+.|.++|.. |+.... +..+ ..
T Consensus 181 lyv~d~~~~~I~~~~~~~~g~~~~~~~~~~~~---~P~gi~vd~dG~l~va~~~~~~V~~~~~~-G~~~~~~~~~~~~~~ 256 (306)
T 2p4o_A 181 LYVSNTEKMLLLRIPVDSTDKPGEPEIFVEQT---NIDDFAFDVEGNLYGATHIYNSVVRIAPD-RSTTIIAQAEQGVIG 256 (306)
T ss_dssp EEEEETTTTEEEEEEBCTTSCBCCCEEEEESC---CCSSEEEBTTCCEEEECBTTCCEEEECTT-CCEEEEECGGGTCTT
T ss_pred EEEEeCCCCEEEEEEeCCCCCCCccEEEeccC---CCCCeEECCCCCEEEEeCCCCeEEEECCC-CCEEEEeecccccCC
Confidence 444555555 99999864 3210 11211111 11246678877666665556789999975 765332 2222 56
Q ss_pred eEEEEEC---Cc--EEEEEec
Q psy505 140 ILAVKLN---RK--KEEEEDE 155 (161)
Q Consensus 140 V~~v~~~---~~--~~vv~~~ 155 (161)
..+++|. |+ .|.|...
T Consensus 257 p~~~a~~g~~~d~~~LyVt~~ 277 (306)
T 2p4o_A 257 STAVAFGQTEGDCTAIYVVTN 277 (306)
T ss_dssp EEEEEECCSTTTTTEEEEEEC
T ss_pred ceEEEEecccCCCCEEEEECC
Confidence 8999998 55 6666543
|
| >1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1 | Back alignment and structure |
|---|
Probab=84.05 E-value=15 Score=30.67 Aligned_cols=78 Identities=10% Similarity=0.069 Sum_probs=54.5
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEE-CCcEEEEE
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKL-NRKKEEEE 153 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~-~~~~~vv~ 153 (161)
+-|-|+.++... .++.-..+ ..-|..+.+.+++=+ .++++|+|+++.+.+..+.++..|.-=+| |++.|++|
T Consensus 50 vvIiDl~~~~~~--~rrpi~Ad--sAIMnP~~~iiALra---g~~lQiFnle~K~klks~~~~e~VvfWkWis~~~l~lV 122 (494)
T 1bpo_A 50 VVIIDMNDPSNP--IRRPISAD--SAIMNPASKVIALKA---GKTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV 122 (494)
T ss_dssp EEEEETTSTTSC--EEEECCCS--EEEECSSSSCEEEEE---TTEEEEEETTTTEEEEEEECSSCCCEEEEEETTEEEEE
T ss_pred EEEEECCCCCcc--eecccccc--eeeeCCCCcEEEEec---CCeEEEEchHHhhhhcceecCCCceEEEecCCCeEEEE
Confidence 777888775543 22332222 223566667777765 35899999999999999988765544444 99999999
Q ss_pred ecccee
Q psy505 154 DEEEEK 159 (161)
Q Consensus 154 ~~~~~~ 159 (161)
++..+|
T Consensus 123 T~taVy 128 (494)
T 1bpo_A 123 TDNAVY 128 (494)
T ss_dssp CSSEEE
T ss_pred cCCeeE
Confidence 998876
|
| >4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus} | Back alignment and structure |
|---|
Probab=80.63 E-value=21 Score=28.73 Aligned_cols=59 Identities=3% Similarity=-0.048 Sum_probs=33.7
Q ss_pred EEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecC
Q psy505 67 LSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFK 126 (161)
Q Consensus 67 lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~ 126 (161)
+++-..++ |+.+|..++.....++...... .-..++|+|++. ..++....+.|..+|..
T Consensus 243 yv~d~~~~~V~~~d~~~g~~~~~~~~~~~~~-~~~~ia~dpdG~~LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 243 YYTRYHHAMISSYDPATGTLTEEEVMMDTKG-SNFHIVWHPTGDWAYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EECBTTCSEEEEECTTTCCEEEEEEECSCCS-SCEEEEECTTSSEEEEEETTTTEEEEEEBC
T ss_pred EEEECCCCEEEEEECCCCeEEEEEeccCCCC-CcccEEEeCCCCEEEEEeCCCCEEEEEeCC
Confidence 33334455 8899987765322333221111 112588998773 44555566789998765
|
| >3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} | Back alignment and structure |
|---|
Probab=80.16 E-value=30 Score=30.38 Aligned_cols=134 Identities=11% Similarity=-0.006 Sum_probs=70.9
Q ss_pred ceeEEeecCC-CceEEEEcCCCCcceEEEEEcCCC----CceeeeeccCccceeee-------eEEEecCCc-eEEEEeC
Q psy505 15 NGICCLCVNS-DNCYLAYPGSNSIGEVQIFDADNL----HAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 15 ~~v~~~~~~~-d~~~la~~g~~~dg~v~iWd~~~~----~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~ 81 (161)
....++++++ ++.+..+-.. .+.|+.+++... .....+...-....+|+ ++.+-+..+ |++.++.
T Consensus 424 ~~~~gl~~d~~~~~lY~sD~~--~~~I~~~~l~g~~~~~~~~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ld 501 (791)
T 3m0c_C 424 RNVVALDTEVASNRIYWSDLS--QRMICSTQLDRAHGVSSYDTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADTK 501 (791)
T ss_dssp SSEEEEEEETTTTEEEEEETT--TTEEEEEEC--------CEEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEeecccCCeeEEeecc--ceeEEEEeccCCCCCcceeEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEeCC
Confidence 3456777776 3444444332 678988888753 22333333334455666 444455555 9999986
Q ss_pred CcCceeeEEeecCcceEEEEEeecCC-eEEEEecCC-CCeEEEEecCCCCeEEEEEec--CceEEEEECC--cEEEEEe
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSS-LVAVVSLSS-PRKLTVCHFKRGSEICNYSFS--NTILAVKLNR--KKEEEED 154 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~-~~~~~s~~~-d~~i~iWD~~~~~~i~~l~~~--~~V~~v~~~~--~~~vv~~ 154 (161)
. .....+...... .-..+++.|. +...++... ...|...++. |.....+... ....+|++++ .+|.++.
T Consensus 502 G-~~~~~l~~~~l~--~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~d-G~~~~~lv~~~l~~P~GLavD~~~~~LYwaD 576 (791)
T 3m0c_C 502 G-VKRKTLFRENGS--KPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN-GVDIYSLVTENIQWPNGITLDLLSGRLYWVD 576 (791)
T ss_dssp S-SSEEEEEECTTC--CEEEEEEETTTTEEEEEECSSSCEEEEEETT-SCCEEEEECSSCSCEEEEEEETTTTEEEEEE
T ss_pred C-CeEEEEEeCCCC--CcceEEEecCCCCEEEecCCCCCeEEEEecC-CCceEEEEeCCCCCceEEEEecCCCeEEEEe
Confidence 4 333233332211 1346667763 444444322 2578888876 4434444322 4677788874 4676664
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
No hit with e-value below 0.005
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 161 | |||
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.88 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.88 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.87 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.87 | |
| d1nr0a1 | 311 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.87 | |
| d1tbga_ | 340 | beta1-subunit of the signal-transducing G protein | 99.86 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.86 | |
| d1vyhc1 | 317 | Platelet-activating factor acetylhydrolase IB subu | 99.86 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.85 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.84 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.84 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.83 | |
| d1gxra_ | 337 | Groucho/tle1, C-terminal domain {Human (Homo sapie | 99.83 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.83 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.82 | |
| d1nexb2 | 355 | Cdc4 propeller domain {Baker's yeast (Saccharomyce | 99.81 | |
| d1k8kc_ | 371 | Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taur | 99.8 | |
| d2ovrb2 | 342 | F-box/WD repeat-containing protein 7, FBXW7 {Human | 99.8 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.79 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.77 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.76 | |
| d1erja_ | 388 | Tup1, C-terminal domain {Baker's yeast (Saccharomy | 99.76 | |
| d1nr0a2 | 299 | Actin interacting protein 1 {Nematode (Caenorhabdi | 99.75 | |
| d1pgua1 | 325 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.74 | |
| d1sq9a_ | 393 | Antiviral protein Ski8 (Ski8p) {Baker's yeast (Sac | 99.72 | |
| d1pgua2 | 287 | Actin interacting protein 1 {Baker's yeast (Saccha | 99.71 | |
| d1p22a2 | 293 | F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Hom | 99.66 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.64 | |
| d1k32a3 | 360 | Tricorn protease domain 2 {Archaeon Thermoplasma a | 99.62 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.55 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.53 | |
| d1qksa2 | 432 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.49 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.49 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.38 | |
| d1yfqa_ | 342 | Cell cycle arrest protein BUB3 {Baker's yeast (Sac | 99.34 | |
| d1pbyb_ | 337 | Quinohemoprotein amine dehydrogenase B chain {Para | 99.33 | |
| d1hzua2 | 426 | C-terminal (heme d1) domain of cytochrome cd1-nitr | 99.32 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.3 | |
| d1l0qa2 | 301 | Surface layer protein {Archaeon Methanosarcina maz | 99.28 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 99.08 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 99.03 | |
| d1jmxb_ | 346 | Quinohemoprotein amine dehydrogenase B chain {Pseu | 99.01 | |
| d2madh_ | 373 | Methylamine dehydrogenase, H-chain {Gram negative | 98.93 | |
| d1ri6a_ | 333 | Putative isomerase YbhE {Escherichia coli [TaxId: | 98.92 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.9 | |
| d2bbkh_ | 355 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.79 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.51 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.49 | |
| d1mdah_ | 368 | Methylamine dehydrogenase, H-chain {Paracoccus den | 98.49 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 98.15 | |
| d2bgra1 | 470 | Dipeptidyl peptidase IV/CD26, N-terminal domain {P | 98.13 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.84 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.71 | |
| d1q7fa_ | 279 | Brain tumor cg10719-pa {Fruit fly (Drosophila mela | 97.69 | |
| d1qnia2 | 441 | Nitrous oxide reductase, N-terminal domain {Pseudo | 97.66 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 96.8 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 96.57 | |
| d1jofa_ | 365 | 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neu | 96.47 | |
| d2p4oa1 | 302 | Hypothetical protein All0351 homologue {Nostoc pun | 96.25 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 96.05 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 95.64 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 95.46 | |
| d1rwia_ | 260 | Serine/threonine-protein kinase PknD {Mycobacteriu | 95.33 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 94.13 | |
| d2hqsa1 | 269 | TolB, C-terminal domain {Escherichia coli [TaxId: | 92.91 | |
| d2dg1a1 | 319 | Lactonase Drp35 {Staphylococcus aureus [TaxId: 128 | 92.08 | |
| d1pjxa_ | 314 | Diisopropylfluorophosphatase (phosphotriesterase, | 91.31 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 90.88 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 90.37 | |
| d1flga_ | 582 | Ethanol dehydrogenase {Pseudomonas aeruginosa [Tax | 90.17 | |
| d1kb0a2 | 573 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 88.68 | |
| d1k32a2 | 281 | Tricorn protease N-terminal domain {Archaeon Therm | 88.65 | |
| d1xfda1 | 465 | Dipeptidyl aminopeptidase-like protein 6, DPP6, N- | 88.14 | |
| d1kv9a2 | 560 | Quinoprotein alcohol dehydrogenase, N-terminal dom | 85.44 | |
| d1utca2 | 327 | Clathrin heavy-chain terminal domain {Rat (Rattus | 84.48 | |
| d1k3ia3 | 387 | Galactose oxidase, central domain {Fungi (Fusarium | 83.7 | |
| d2ad6a1 | 571 | Methanol dehydrogenase, heavy chain {Methylophilus | 83.16 | |
| d1w6sa_ | 596 | Methanol dehydrogenase, heavy chain {Methylobacter | 82.77 | |
| d2ghsa1 | 295 | Regucalcin {Agrobacterium tumefaciens [TaxId: 358] | 82.63 |
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.88 E-value=1.2e-21 Score=149.16 Aligned_cols=147 Identities=16% Similarity=0.153 Sum_probs=114.5
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------e--------
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------S-------- 66 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~-------- 66 (161)
|++.+|+ .+|.. .|.+++|+|++.+||+++. ||+|+|||+.+++.+..+.+|.++|.+++ +
T Consensus 45 ~~~~~tL-~GH~~--~I~~l~~s~~~~~l~sgs~--Dg~v~iWd~~~~~~~~~~~~~~~~v~~v~~~~~~~~l~~~~~d~ 119 (340)
T d1tbga_ 45 MRTRRTL-RGHLA--KIYAMHWGTDSRLLVSASQ--DGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVACGGLDN 119 (340)
T ss_dssp CCEEEEE-CCCSS--CEEEEEECTTSSEEEEEET--TTEEEEEETTTTEEEEEEECSCSCEEEEEECTTSSEEEEEETTC
T ss_pred eeeeEEE-CCCCC--CEEEEEECCCCCEEEEEEC--CCceeeeecccceeEEEEecccccEEeeEeeccceeeeeecccc
Confidence 5677888 66554 5999999999999999776 99999999999999999999999998765 3
Q ss_pred -------------------------------------------------------------------------------E
Q psy505 67 -------------------------------------------------------------------------------L 67 (161)
Q Consensus 67 -------------------------------------------------------------------------------l 67 (161)
+
T Consensus 120 ~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 199 (340)
T d1tbga_ 120 ICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETGQQTTTFTGHTGDVMSLSLAPDTRLF 199 (340)
T ss_dssp CEEEEESSSSCSCCCEEEEECCCSSCEEEEEEEETTEEEEEETTTEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSEE
T ss_pred eeecccccccccccccceecccccccccccccccccccccccccccccccccccccccccccccceeEeeecccccccee
Confidence 4
Q ss_pred EEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe---cCceEEE
Q psy505 68 SVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF---SNTILAV 143 (161)
Q Consensus 68 asgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~---~~~V~~v 143 (161)
++|+.|+ +++||+++++++ ..+.+|.. .+.+++|+|++..+++++.|+.|++||....+.+..+.. ...|.++
T Consensus 200 ~~~~~d~~v~i~d~~~~~~~-~~~~~h~~--~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~~~~~~~~~~~~i~~~ 276 (340)
T d1tbga_ 200 VSGACDASAKLWDVREGMCR-QTFTGHES--DINAICFFPNGNAFATGSDDATCRLFDLRADQELMTYSHDNIICGITSV 276 (340)
T ss_dssp EEEETTTEEEEEETTTTEEE-EEECCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCTTCCSCEEEE
T ss_pred EEeecCceEEEEECCCCcEE-EEEeCCCC--CeEEEEECCCCCEEEEEeCCCeEEEEeecccccccccccccccCceEEE
Confidence 5555566 666666665543 34455554 367888999988888888899999999999988877753 4679999
Q ss_pred EECCc--EEEEEec
Q psy505 144 KLNRK--KEEEEDE 155 (161)
Q Consensus 144 ~~~~~--~~vv~~~ 155 (161)
.|+|+ .+++...
T Consensus 277 ~~s~~~~~l~~g~~ 290 (340)
T d1tbga_ 277 SFSKSGRLLLAGYD 290 (340)
T ss_dssp EECSSSCEEEEEET
T ss_pred EECCCCCEEEEEEC
Confidence 99998 3444443
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.88 E-value=2.3e-21 Score=145.18 Aligned_cols=139 Identities=12% Similarity=0.161 Sum_probs=119.8
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee--------------------------eE
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA--------------------------SL 67 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~--------------------------~l 67 (161)
...+.+++++|++.++++++. ||.|++||+.+++++..+.+|...+.+++ ++
T Consensus 143 ~~~~~~~~~~~~~~~l~~~~~--d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 220 (317)
T d1vyhc1 143 REWVRMVRPNQDGTLIASCSN--DQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 220 (317)
T ss_dssp SSCEEEEEECTTSSEEEEEET--TSCEEEEETTTCCEEEEECCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEE
T ss_pred CCcceeeecccCCCEEEEEeC--CCeEEEEeeccceeeEEEecCCCCceEEEEeeccccceeeccccceeeeeccCCcee
Confidence 345788889999999998776 99999999999999999999999988775 58
Q ss_pred EEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEE
Q psy505 68 SVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKL 145 (161)
Q Consensus 68 asgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~ 145 (161)
++|+.|| |++||.++++++ ..+.+|.. .+.+++|+|++..+++++.|++|+|||+++++++..+. |.++|.+++|
T Consensus 221 ~~~~~d~~i~~~~~~~~~~~-~~~~~~~~--~v~~~~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~h~~~V~~~~~ 297 (317)
T d1vyhc1 221 LSGSRDKTIKMWDVSTGMCL-MTLVGHDN--WVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAHEHFVTSLDF 297 (317)
T ss_dssp EEEETTSEEEEEETTTTEEE-EEEECCSS--CEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECCSSCEEEEEE
T ss_pred EeccCCCEEEEEECCCCcEE-EEEeCCCC--CEEEEEECCCCCEEEEEECCCeEEEEECCCCcEEEEEcCCCCCEEEEEE
Confidence 8999999 999999998766 45667765 47788999998888888889999999999999999987 6889999999
Q ss_pred CCc--EEEEEeccc
Q psy505 146 NRK--KEEEEDEEE 157 (161)
Q Consensus 146 ~~~--~~vv~~~~~ 157 (161)
+|+ .++.+..|.
T Consensus 298 s~~~~~l~s~s~Dg 311 (317)
T d1vyhc1 298 HKTAPYVVTGSVDQ 311 (317)
T ss_dssp CSSSSCEEEEETTS
T ss_pred cCCCCEEEEEeCCC
Confidence 997 566666653
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.87 E-value=1.1e-21 Score=152.55 Aligned_cols=140 Identities=9% Similarity=0.086 Sum_probs=115.5
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCce
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~ 86 (161)
...|.+++++|++.+++++|+. ||.|++||++++++...+.+|+.+|+++. +|++|+.|| +++||.+++...
T Consensus 146 ~~~v~~v~~~~~~~~~l~sgs~-d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~~~~l~~~~~d~~v~~~d~~~~~~~ 224 (311)
T d1nr0a1 146 ARAMNSVDFKPSRPFRIISGSD-DNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKT 224 (311)
T ss_dssp SSCEEEEEECSSSSCEEEEEET-TSCEEEEETTTBEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEE
T ss_pred ccccccccccccceeeeccccc-ccccccccccccccccccccccccccccccCcccccccccccccccccccccccccc
Confidence 3468899999998864433443 99999999999999999999999999999 899999999 999999887654
Q ss_pred eeEE------eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec----CceEEEEECCcEEEEEecc
Q psy505 87 EQIY------ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS----NTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 87 ~~~~------~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~----~~V~~v~~~~~~~vv~~~~ 156 (161)
..+. .+|.+ .|.+++|+|++..+++++.|++|+|||+++++++.++... ..+.++.++++.++++..+
T Consensus 225 ~~~~~~~~~~~~h~~--~V~~~~~s~~~~~l~tgs~Dg~v~iwd~~t~~~~~~l~~~~~~~~~~~~~~~~~~~l~s~s~d 302 (311)
T d1nr0a1 225 GVFEDDSLKNVAHSG--SVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKTIPVGTRIEDQQLGIIWTKQALVSISAN 302 (311)
T ss_dssp EECBCTTSSSCSSSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECCSSGGGCEEEEEECSSCEEEEETT
T ss_pred ccccccccccccccc--cccccccCCCCCEEEEEeCCCeEEEEECCCCcEEEEEECCCCccceEEEEEecCCEEEEEECC
Confidence 3221 13443 4778999999988999889999999999999999988742 4678899999999888655
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.87 E-value=4e-22 Score=158.66 Aligned_cols=119 Identities=13% Similarity=0.125 Sum_probs=97.0
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceee------eeccCccceeee------eEEEecCCc----eEEEE
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTM------IPAHDSPLAALA------SLSVGTKSG----YRLFS 79 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~------l~~H~~~V~~l~------~lasgs~dg----iriwd 79 (161)
.+.+++++||+ ++|+++. ||+|+|||+.+++++.. +.+|.++|++++ +|++|+.|+ |||||
T Consensus 186 ~~~~v~~s~dg-~lasgs~--Dg~i~iwd~~~~~~~~~~~~~~~l~~h~~~V~~l~~spdg~~l~sgs~D~t~~~i~lwd 262 (393)
T d1sq9a_ 186 FATSVDISERG-LIATGFN--NGTVQISELSTLRPLYNFESQHSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYE 262 (393)
T ss_dssp CCCEEEECTTS-EEEEECT--TSEEEEEETTTTEEEEEEECCC---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEE
T ss_pred cEEEEEECCCC-EEEEEeC--CCcEEEEeecccccccccccccccccccceEEEcccccccceeeeecCCCCcceeeecc
Confidence 46788899998 7777665 99999999999887654 457999999998 899999874 99999
Q ss_pred eCCcCceeeEE------------eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCc
Q psy505 80 LNSIDTLEQIY------------ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNT 139 (161)
Q Consensus 80 ~~~~~~~~~~~------------~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~ 139 (161)
+++++.+..+. .||.+ .|.+++|+|++..++|++.|++|+|||+++|+++..+. |.+.
T Consensus 263 ~~~g~~~~~l~~~~~~~~~~~~~~gH~~--~V~~l~fspd~~~l~S~s~D~~v~vWd~~~g~~~~~l~gH~~~ 333 (393)
T d1sq9a_ 263 TEFGERIGSLSVPTHSSQASLGEFAHSS--WVMSLSFNDSGETLCSAGWDGKLRFWDVKTKERITTLNMHCDD 333 (393)
T ss_dssp TTTCCEEEEECBC--------CCBSBSS--CEEEEEECSSSSEEEEEETTSEEEEEETTTTEEEEEEECCGGG
T ss_pred cccceeeeeeccccccccceeeeecccC--ceeeeccCCCCCeeEEECCCCEEEEEECCCCCEEEEECCcCCc
Confidence 99987653321 25764 47889999999999999999999999999999999986 4443
|
| >d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.87 E-value=4.8e-21 Score=148.95 Aligned_cols=147 Identities=12% Similarity=0.112 Sum_probs=116.2
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCce--eeeeccCccceeee------eEEEecCC
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAK--TMIPAHDSPLAALA------SLSVGTKS 73 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~--~~l~~H~~~V~~l~------~lasgs~d 73 (161)
++.+.+ ..| ...|.+++++|||.+||+++. ||+|+|||+.+++.. ..+.+|.++|.+++ +|++++.+
T Consensus 49 ~~~~~~-~~H--~~~v~~~~~sp~g~~latg~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~v~~s~d~~~l~~~~~~ 123 (311)
T d1nr0a1 49 TDTEIY-TEH--SHQTTVAKTSPSGYYCASGDV--HGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSESKRIAAVGEG 123 (311)
T ss_dssp SCCEEE-CCC--SSCEEEEEECTTSSEEEEEET--TSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTTSCEEEEEECC
T ss_pred ceeEEE-cCC--CCCEEEEEEeCCCCeEecccc--CceEeeeeeeccccccccccccccCcccccccccccccccccccc
Confidence 345555 444 446999999999999998776 999999999988754 56899999999998 77777754
Q ss_pred --c-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeE-EEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 74 --G-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 74 --g-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
. ++||+.+++++. ..+.+|.+. |.+++|+|++. .+++++.|++|++||+++++++..+. +..+|.++.|+|+
T Consensus 124 ~~~~~~v~~~~~~~~~-~~l~~h~~~--v~~v~~~~~~~~~l~sgs~d~~i~i~d~~~~~~~~~~~~~~~~i~~v~~~p~ 200 (311)
T d1nr0a1 124 RERFGHVFLFDTGTSN-GNLTGQARA--MNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPD 200 (311)
T ss_dssp SSCSEEEEETTTCCBC-BCCCCCSSC--EEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEECCCSSCEEEEEECTT
T ss_pred cccccccccccccccc-ccccccccc--cccccccccceeeecccccccccccccccccccccccccccccccccccCcc
Confidence 4 999999988765 456777654 67788998764 46777789999999999999888876 6789999999997
Q ss_pred --EEEEEecc
Q psy505 149 --KEEEEDEE 156 (161)
Q Consensus 149 --~~vv~~~~ 156 (161)
.++++..+
T Consensus 201 ~~~l~~~~~d 210 (311)
T d1nr0a1 201 GSLFASTGGD 210 (311)
T ss_dssp SSEEEEEETT
T ss_pred cccccccccc
Confidence 44444443
|
| >d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: beta1-subunit of the signal-transducing G protein heterotrimer species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.86 E-value=5.2e-21 Score=145.69 Aligned_cols=140 Identities=14% Similarity=0.184 Sum_probs=116.4
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCce
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~ 86 (161)
...+......+++.++++++. ||.|++||+++++++.++.+|.++|++++ +|++|+.|| |++||++.....
T Consensus 184 ~~~~~~~~~~~~~~~~~~~~~--d~~v~i~d~~~~~~~~~~~~h~~~i~~v~~~p~~~~l~s~s~d~~i~~~~~~~~~~~ 261 (340)
T d1tbga_ 184 TGDVMSLSLAPDTRLFVSGAC--DASAKLWDVREGMCRQTFTGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQEL 261 (340)
T ss_dssp SSCEEEEEECTTSSEEEEEET--TTEEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred ceeEeeeccccccceeEEeec--CceEEEEECCCCcEEEEEeCCCCCeEEEEECCCCCEEEEEeCCCeEEEEeecccccc
Confidence 345667777788888888665 99999999999999999999999999998 899999999 999999886654
Q ss_pred eeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEecc
Q psy505 87 EQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 87 ~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
..+........+.+++|+|++..+++++.|++|+|||+.+++++..+. |.++|.+++|+|+ .++.+..|
T Consensus 262 -~~~~~~~~~~~i~~~~~s~~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~H~~~V~~l~~s~d~~~l~s~s~D 333 (340)
T d1tbga_ 262 -MTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNVWDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWD 333 (340)
T ss_dssp -EEECCTTCCSCEEEEEECSSSCEEEEEETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTTSSCEEEEETT
T ss_pred -cccccccccCceEEEEECCCCCEEEEEECCCEEEEEECCCCcEEEEEcCCCCCEEEEEEeCCCCEEEEEccC
Confidence 233333323357889999999888988899999999999999999987 6889999999997 56655554
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.86 E-value=2.3e-20 Score=141.28 Aligned_cols=132 Identities=12% Similarity=0.191 Sum_probs=106.8
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCceeeEE
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTLEQIY 90 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~~~~~ 90 (161)
.+..+++ ++.++++++. ||.|++||+++++++..+.+|...|.+++ +|++|+.|| |++||..+.+... .+
T Consensus 179 ~~~~~~~--~~~~l~s~~~--dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~d~~i~iwd~~~~~~~~-~~ 253 (342)
T d2ovrb2 179 RVYSLQF--DGIHVVSGSL--DTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIKTGQCLQ-TL 253 (342)
T ss_dssp CEEEEEE--CSSEEEEEET--TSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEETTSCEEEEETTTCCEEE-EE
T ss_pred ccccccC--CCCEEEEEeC--CCeEEEeecccceeeeEecccccceeEEecCCCEEEEEcCCCEEEEEecccccccc-cc
Confidence 3555555 6788888776 99999999999999999999999999998 999999999 9999998876553 34
Q ss_pred eecC-cceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe------cCceEEEEECCcEEEEEe
Q psy505 91 ENSQ-EDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF------SNTILAVKLNRKKEEEED 154 (161)
Q Consensus 91 ~~~~-~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~------~~~V~~v~~~~~~~vv~~ 154 (161)
.++. +...+.++.|+++.++.+ +.|++|+|||+++++++.++.. .+.|.+++|+|++.+++.
T Consensus 254 ~~~~~~~~~~~~~~~~~~~~~s~--s~Dg~i~iwd~~tg~~i~~~~~~~~~~~~~~v~~v~~s~~~~~la~ 322 (342)
T d2ovrb2 254 QGPNKHQSAVTCLQFNKNFVITS--SDDGTVKLWDLKTGEFIRNLVTLESGGSGGVVWRIRASNTKLVCAV 322 (342)
T ss_dssp CSTTSCSSCEEEEEECSSEEEEE--ETTSEEEEEETTTCCEEEEEEECTTGGGTCEEEEEEECSSEEEEEE
T ss_pred cccceeeeceeecccCCCeeEEE--cCCCEEEEEECCCCCEEEEEecccCCCCCCCEEEEEECCCCCEEEE
Confidence 4332 334577888898876544 4689999999999999988752 357999999999777665
|
| >d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor acetylhydrolase IB subunit alpha {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Platelet-activating factor acetylhydrolase IB subunit alpha species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.86 E-value=1.1e-20 Score=141.42 Aligned_cols=137 Identities=4% Similarity=0.073 Sum_probs=116.2
Q ss_pred eEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------------------
Q psy505 4 LHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------------------ 65 (161)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------------------ 65 (161)
.++| .+| ...|.+++++|++.+||+++. ||+|+|||+.+++++.++++|.++|.+++
T Consensus 10 ~~~L-~GH--~~~I~~l~~sp~~~~l~s~s~--Dg~i~iWd~~~~~~~~~~~~h~~~V~~~~~~~~~~~~~~~~~~~~~~ 84 (317)
T d1vyhc1 10 KYAL-SGH--RSPVTRVIFHPVFSVMVSASE--DATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLASCSADMTIK 84 (317)
T ss_dssp SCEE-ECC--SSCEEEEEECSSSSEEEEEES--SSCEEEEETTTCCCCEEECCCSSCEEEEEECTTSSEEEEEETTSCCC
T ss_pred cEEE-cCC--CCCeEEEEEcCCCCEEEEEeC--CCeEEEEECCCCCEEEEEeCCCCcEEEEeeecccccccccccccccc
Confidence 3566 444 446999999999999999776 99999999999999999999999998765
Q ss_pred ------------------------------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEec
Q psy505 66 ------------------------------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSL 114 (161)
Q Consensus 66 ------------------------------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~ 114 (161)
.+++++.|+ +++||+++++.+ ..+.+|... +.+++|+|++..++++
T Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~~~~~~~~l~~~ 161 (317)
T d1vyhc1 85 LWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCV-KTFTGHREW--VRMVRPNQDGTLIASC 161 (317)
T ss_dssp EEETTSSCEEECCCCCSSCEEEEEECSSSSEEEEEETTSEEEEEETTTCCEE-EEEECCSSC--EEEEEECTTSSEEEEE
T ss_pred cccccccccccccccccccceeeeccCCCceEEeeccCcceeEeecccceee-eEEccCCCc--ceeeecccCCCEEEEE
Confidence 578899999 999999998765 456677643 6678899988888888
Q ss_pred CCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCc
Q psy505 115 SSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK 148 (161)
Q Consensus 115 ~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~ 148 (161)
+.|+.|++||..+++.+..+. +...|..+.|+|+
T Consensus 162 ~~d~~v~~~~~~~~~~~~~~~~~~~~i~~~~~~~~ 196 (317)
T d1vyhc1 162 SNDQTVRVWVVATKECKAELREHRHVVECISWAPE 196 (317)
T ss_dssp ETTSCEEEEETTTCCEEEEECCCSSCEEEEEECCS
T ss_pred eCCCeEEEEeeccceeeEEEecCCCCceEEEEeec
Confidence 889999999999999988886 5788999999876
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.85 E-value=8.5e-21 Score=149.80 Aligned_cols=136 Identities=12% Similarity=0.161 Sum_probs=107.8
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCC--ceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLH--AKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~--~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
|.+++++|||.++|+++. ||.|+|||+.+++ ++..|++|.++|++++ +|++|+.|+ |+|||++++....
T Consensus 10 It~~~~s~dg~~la~~~~--~~~i~iw~~~~~~~~~~~~l~gH~~~V~~l~fsp~~~~l~s~s~D~~i~vWd~~~~~~~~ 87 (371)
T d1k8kc_ 10 ISCHAWNKDRTQIAICPN--NHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPDSNRIVTCGTDRNAYVWTLKGRTWKP 87 (371)
T ss_dssp CCEEEECTTSSEEEEECS--SSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETTTTEEEEEETTSCEEEEEEETTEEEE
T ss_pred eEEEEECCCCCEEEEEeC--CCEEEEEECCCCCEEEEEEecCCCCCEEEEEECCCCCEEEEEECCCeEEEEeeccccccc
Confidence 778899999999999775 8999999998875 6788999999999998 899999999 9999998764321
Q ss_pred -eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-----ecCceEEEEECCc--EEEEEecc
Q psy505 88 -QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-----FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 88 -~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-----~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
..+.+|.. .+.++.|+|++..+++++.|++|++|++........+. +.+.|.+++|+|+ .++++..|
T Consensus 88 ~~~~~~~~~--~v~~i~~~p~~~~l~~~s~d~~i~i~~~~~~~~~~~~~~~~~~~~~~v~~v~~~p~~~~l~s~s~D 162 (371)
T d1k8kc_ 88 TLVILRINR--AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCD 162 (371)
T ss_dssp EEECCCCSS--CEEEEEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETT
T ss_pred ccccccccc--cccccccccccccceeecccCcceeeeeecccccccccccccccccccccccccccccceeccccC
Confidence 12334544 36788899998888888889999999988766443322 4578999999997 45544443
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.84 E-value=1.5e-19 Score=140.39 Aligned_cols=137 Identities=18% Similarity=0.208 Sum_probs=115.8
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
+...+.+++++|++..+++++. ||.|++||+++++.+..+. |.++|.+++ +|++|+.|| +++||+++++.
T Consensus 182 ~~~~v~~l~~s~~~~~~~~~~~--d~~v~i~d~~~~~~~~~~~-~~~~i~~l~~~~~~~~l~~~~~d~~i~i~d~~~~~~ 258 (337)
T d1gxra_ 182 HTDGASCIDISNDGTKLWTGGL--DNTVRSWDLREGRQLQQHD-FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDK 258 (337)
T ss_dssp CSSCEEEEEECTTSSEEEEEET--TSEEEEEETTTTEEEEEEE-CSSCEEEEEECTTSSEEEEEETTSCEEEEETTSSCE
T ss_pred cccccccccccccccccccccc--cccccccccccceeecccc-cccceEEEEEcccccccceecccccccccccccccc
Confidence 3446888999999999998776 9999999999998887764 889999988 899999999 99999988764
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEecc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
. ....|.. .+.+++|+|++..+++++.|++|++||..+++++..+.+.+.|.+++|+|+ .|++...|
T Consensus 259 ~--~~~~~~~--~i~~v~~s~~g~~l~s~s~Dg~i~iwd~~~~~~~~~~~~~~~v~~~~~s~d~~~l~t~s~D 327 (337)
T d1gxra_ 259 Y--QLHLHES--CVLSLKFAYCGKWFVSTGKDNLLNAWRTPYGASIFQSKESSSVLSCDISVDDKYIVTGSGD 327 (337)
T ss_dssp E--EECCCSS--CEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSCEEEEEECTTSCEEEEEETT
T ss_pred c--ccccccc--ccceEEECCCCCEEEEEeCCCeEEEEECCCCCEEEEccCCCCEEEEEEeCCCCEEEEEeCC
Confidence 3 3345554 477889999988888888999999999999999999999999999999997 46666554
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.84 E-value=3e-20 Score=140.08 Aligned_cols=76 Identities=17% Similarity=0.214 Sum_probs=61.0
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeee---eccCccceeee-------eEEEe
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMI---PAHDSPLAALA-------SLSVG 70 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l---~~H~~~V~~l~-------~lasg 70 (161)
||+++.. +.| .++|.+++|+|++.+||+++. ||+|||||+.+++....+ .+|.++|.+++ +|++|
T Consensus 1 ~~~v~~~-~~h--~d~I~~l~fsp~~~~L~s~s~--Dg~v~iwd~~~~~~~~~~~~~~~h~~~V~~v~f~~~~~~~l~sg 75 (342)
T d1yfqa_ 1 MQIVQIE-QAP--KDYISDIKIIPSKSLLLITSW--DGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDLQIYVG 75 (342)
T ss_dssp CEEEECS-SCC--SSCEEEEEEEGGGTEEEEEET--TSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEESSSEEEEEE
T ss_pred CCeEEcC-CCC--CCCEEEEEEeCCCCEEEEEEC--CCeEEEEEccCCCcceEEEEecCCCCCEEEEEEeCCCCCEEEEc
Confidence 7888855 333 347999999999999999775 999999999887654333 47999999987 78888
Q ss_pred cCCc-eEEEEeC
Q psy505 71 TKSG-YRLFSLN 81 (161)
Q Consensus 71 s~dg-iriwd~~ 81 (161)
+.|| |++|+..
T Consensus 76 ~~d~~v~~w~~~ 87 (342)
T d1yfqa_ 76 TVQGEILKVDLI 87 (342)
T ss_dssp ETTSCEEEECSS
T ss_pred ccccceeeeecc
Confidence 8888 8888764
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.83 E-value=2.2e-20 Score=142.08 Aligned_cols=134 Identities=14% Similarity=0.143 Sum_probs=105.9
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCceee
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
...+.++.++|++..+++++. ||+|++||+.++.++..+++|..+|.+++ +|++|+.|| |++||++++..
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~--d~~i~i~d~~~~~~~~~~~~h~~~v~~~~~~~~~l~~~~~dg~i~iwd~~~~~~--- 275 (355)
T d1nexb2 201 TDRIYSTIYDHERKRCISASM--DTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSR--- 275 (355)
T ss_dssp SSCEEEEEEETTTTEEEEEET--TSCEEEEETTTCCEEEEECCCSSCCCEEEECSSEEEEECTTSEEEEEETTTCCE---
T ss_pred ccccccccccccceeeecccc--cceEEeeeccccccccccccccccccccccccceeeeeecccccccccccccce---
Confidence 344667788889999988775 99999999999999999999999999998 999999999 99999987653
Q ss_pred EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEE-EE-ecCceEEEEECCcEEEEEe
Q psy505 89 IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICN-YS-FSNTILAVKLNRKKEEEED 154 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~-l~-~~~~V~~v~~~~~~~vv~~ 154 (161)
.+.+|...+.. ...|++++..++++ +|++|+|||+++|+++.. +. +.++|++++|+|+.++++.
T Consensus 276 ~~~~~~~~~~~-~~~~~~~~~~l~~g-~d~~i~vwd~~tg~~~~~~~~~~~~~V~~v~~~~~~~~~~~ 341 (355)
T d1nexb2 276 KFSYHHTNLSA-ITTFYVSDNILVSG-SENQFNIYNLRSGKLVHANILKDADQIWSVNFKGKTLVAAV 341 (355)
T ss_dssp EEEEECTTCCC-CCEEEECSSEEEEE-ETTEEEEEETTTCCBCCSCTTTTCSEEEEEEEETTEEEEEE
T ss_pred ecccccCCceE-EEEEcCCCCEEEEE-eCCEEEEEECCCCCEEEEEecCCCCCEEEEEEcCCeEEEEE
Confidence 34555433221 12355666556665 478999999999998854 33 5789999999999877654
|
| >d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Groucho/tle1, C-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.83 E-value=2.6e-19 Score=139.11 Aligned_cols=140 Identities=14% Similarity=0.138 Sum_probs=116.5
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCC--CceeeeeccCccceeee------eEEEecCCc-eEEEEeCC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNL--HAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNS 82 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~--~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~ 82 (161)
.+...|.+++++|||.+|++++. ||+|++||+... +....+.+|...|.+++ ++++++.|+ +++||+++
T Consensus 95 ~h~~~I~~v~~s~dg~~l~s~~~--dg~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~s~~~d~~i~~~~~~~ 172 (337)
T d1gxra_ 95 NRDNYIRSCKLLPDGCTLIVGGE--ASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN 172 (337)
T ss_dssp CTTSBEEEEEECTTSSEEEEEES--SSEEEEEECCCC--EEEEEEECSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT
T ss_pred CCCCcEEEEEEcCCCCEEEEeec--ccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 34556999999999999998776 999999998855 45677889999999887 889999999 99999998
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEEecc
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
++.. ....+|... +.+++|++++..++.++.|+.|++||+++++.+..+.+.+.|.+++|+|+ .+++...+
T Consensus 173 ~~~~-~~~~~~~~~--v~~l~~s~~~~~~~~~~~d~~v~i~d~~~~~~~~~~~~~~~i~~l~~~~~~~~l~~~~~d 245 (337)
T d1gxra_ 173 QTLV-RQFQGHTDG--ASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIFSLGYCPTGEWLAVGMES 245 (337)
T ss_dssp TEEE-EEECCCSSC--EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECTTSSEEEEEETT
T ss_pred cccc-ccccccccc--cccccccccccccccccccccccccccccceeecccccccceEEEEEcccccccceeccc
Confidence 7654 455666654 66788999887777777899999999999999999999999999999987 55555544
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.83 E-value=1.1e-19 Score=137.79 Aligned_cols=147 Identities=14% Similarity=0.174 Sum_probs=106.4
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee----------------
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA---------------- 65 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~---------------- 65 (161)
+.+++ .+|. .+|.+++++|||.+||+++. ||+|++||+.+++++..+. +|.++|++++
T Consensus 4 ~~~~~-~GH~--~~V~~l~~s~dg~~l~s~s~--Dg~v~vWd~~~~~~~~~~~~~h~~~v~~v~~~~~g~~~~~~~d~~v 78 (299)
T d1nr0a2 4 IDQVR-YGHN--KAITALSSSADGKTLFSADA--EGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFTVSWDDHL 78 (299)
T ss_dssp EEEEE-CCCS--SCEEEEEECTTSSEEEEEET--TSCEEEEETTTCCEEECSSCSCSSCEEEEEECTTSCEEEEETTTEE
T ss_pred cceEc-CCCC--CCcEEEEECCCCCEEEEEcC--CCeEEEEECCCCcEEEEEcCCCCCcEEEEEeeccceeecccceeeE
Confidence 45666 5654 46999999999999999776 9999999999999888874 7888887765
Q ss_pred -----------------------------------------------------------------------eEEEecCCc
Q psy505 66 -----------------------------------------------------------------------SLSVGTKSG 74 (161)
Q Consensus 66 -----------------------------------------------------------------------~lasgs~dg 74 (161)
+|++|+.||
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~s~~g~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~s~~~~~l~~g~~dg 158 (299)
T d1nr0a2 79 KVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLTEVPISYNSSCVALSNDKQFVAVGGQDS 158 (299)
T ss_dssp EEECSSSSSSCTTSCCEEECSSCEEEEEECTTSSCEEEEESSEEEEEETTEEEEEECSSCEEEEEECTTSCEEEEEETTS
T ss_pred EEeccCCccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 244555555
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE---E-ecCceEEEEECCc-
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY---S-FSNTILAVKLNRK- 148 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l---~-~~~~V~~v~~~~~- 148 (161)
+++||+++++........|.. .+.+++|+|++..+++++.|+.|++||+.++..+... . |.+.|.+++|+|+
T Consensus 159 ~i~~~d~~~~~~~~~~~~~~~~--~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~ 236 (299)
T d1nr0a2 159 KVHVYKLSGASVSEVKTIVHPA--EITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDN 236 (299)
T ss_dssp EEEEEEEETTEEEEEEEEECSS--CEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEESCCCCCCCCSSCEEEEEECTTS
T ss_pred cccccccccccccccccccccc--cccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 555555543322112223332 4677889998888888888999999999988766443 2 4679999999998
Q ss_pred -EEEEEecc
Q psy505 149 -KEEEEDEE 156 (161)
Q Consensus 149 -~~vv~~~~ 156 (161)
.+++...|
T Consensus 237 ~~l~sgs~d 245 (299)
T d1nr0a2 237 VRLATGSLD 245 (299)
T ss_dssp SEEEEEETT
T ss_pred cceEEEcCC
Confidence 45544443
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.82 E-value=7.3e-19 Score=130.21 Aligned_cols=139 Identities=14% Similarity=0.263 Sum_probs=106.4
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCce
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTL 86 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~ 86 (161)
.+..||.+++| ||.+||+++. ||+|+|||+.+++++.+|.+|+++|.+++ +|++|+.|| |++|++.++...
T Consensus 13 ~~~~~V~c~~~--d~~~l~sgs~--Dg~i~vWd~~~~~~~~~l~~H~~~V~~v~~~~~~l~s~s~D~~i~~~~~~~~~~~ 88 (293)
T d1p22a2 13 ETSKGVYCLQY--DDQKIVSGLR--DNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNTGEML 88 (293)
T ss_dssp SSCCCEEEEEC--CSSEEEEEES--SSCEEEEESSSCCEEEEECCCSSCEEEEECCSSEEEEEETTSCEEEEESSSCCEE
T ss_pred CCCCCEEEEEE--cCCEEEEEeC--CCeEEEEECCCCcEEEEEecCCCCEeeeecccceeeccccccccccccccccccc
Confidence 46678999877 7889998776 99999999999999999999999999999 999999999 999998766432
Q ss_pred eeEEeec----------------------------------------CcceEEEEEeecCCeEEEEecCCCCeEEEEecC
Q psy505 87 EQIYENS----------------------------------------QEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFK 126 (161)
Q Consensus 87 ~~~~~~~----------------------------------------~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~ 126 (161)
....... .+...+....+.++..... +.|+.|++||.+
T Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~--s~d~~i~~~d~~ 166 (293)
T d1p22a2 89 NTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVVDFDDKYIVSA--SGDRTIKVWNTS 166 (293)
T ss_dssp EEECCCCSCEEEEECCTTEEEEEETTSCEEEEECSSSSCCEEEEEECCCSSCEEEEEEETTEEEEE--ETTSEEEEEETT
T ss_pred ccccccccccccccccccceeecccccceeEeeccccccccccccccccccccccceecccccccc--cCCCceeeecCC
Confidence 1110000 0011233344555554443 468899999999
Q ss_pred CCCeEEEEE-ecCceEEEEECCcEEEEEecc
Q psy505 127 RGSEICNYS-FSNTILAVKLNRKKEEEEDEE 156 (161)
Q Consensus 127 ~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~ 156 (161)
+++++..+. +...|..+.+++..++....+
T Consensus 167 ~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~d 197 (293)
T d1p22a2 167 TCEFVRTLNGHKRGIACLQYRDRLVVSGSSD 197 (293)
T ss_dssp TCCEEEEEECCSSCEEEEEEETTEEEEEETT
T ss_pred CCcEEEEEcccccccccccCCCCeEEEecCC
Confidence 999998887 467899999999988877665
|
| >d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Cdc4 propeller domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.81 E-value=4.4e-19 Score=134.80 Aligned_cols=122 Identities=17% Similarity=0.232 Sum_probs=94.6
Q ss_pred eEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCc-eEE
Q psy505 4 LHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSG-YRL 77 (161)
Q Consensus 4 ~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dg-iri 77 (161)
..|| ++|.... +.++++ |+.+||+++. ||+|+|||+.+++++.+|++|+++|++++ +|++|+.|| |++
T Consensus 5 ~~tL-~GH~~~v-itc~~~--~~~~l~tgs~--Dg~i~vWd~~~~~~~~~l~~H~~~V~~l~~s~~~~l~s~s~D~~i~i 78 (355)
T d1nexb2 5 RTTL-RGHMTSV-ITCLQF--EDNYVITGAD--DKMIRVYDSINKKFLLQLSGHDGGVWALKYAHGGILVSGSTDRTVRV 78 (355)
T ss_dssp EEEE-ECCSSSC-EEEEEE--ETTEEEEEET--TTEEEEEETTTTEEEEEEECCSSCEEEEEEETTTEEEEEETTCCEEE
T ss_pred cEEE-CCcCCCc-EEEEEE--CCCEEEEEeC--CCeEEEEECCCCcEEEEEECCCCCEEEEEEcCCCEEEEEeccccccc
Confidence 4567 6776553 456777 5679998765 99999999999999999999999999999 999999999 999
Q ss_pred EEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEE
Q psy505 78 FSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEIC 132 (161)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~ 132 (161)
|+....+... ...............++++...+++++.|++|++||+.+++.+.
T Consensus 79 w~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~iw~~~~~~~~~ 132 (355)
T d1nexb2 79 WDIKKGCCTH-VFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVP 132 (355)
T ss_dssp EETTTTEEEE-EECCCSSCEEEEEEEEETTEEEEEEEETTSEEEEEECCC-----
T ss_pred cccccccccc-ccccccccccccccccccccceeeeecCCCcEEEEEccCCceec
Confidence 9998865442 22223334456667888999888888899999999998876543
|
| >d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Arp2/3 complex 41 kDa subunit ARPC1 species: Cow (Bos taurus) [TaxId: 9913]
Probab=99.80 E-value=9.7e-19 Score=137.81 Aligned_cols=147 Identities=9% Similarity=0.034 Sum_probs=112.4
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc--eeeeeccCccceeee------eEEEecCCc
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA--KTMIPAHDSPLAALA------SLSVGTKSG 74 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~--~~~l~~H~~~V~~l~------~lasgs~dg 74 (161)
+++++ ..| ...|.+++|+|++.+|++++. ||+|+|||+.++.. ...+.+|..+|.+++ +|++|+.|+
T Consensus 43 ~~~~l-~gH--~~~V~~l~fsp~~~~l~s~s~--D~~i~vWd~~~~~~~~~~~~~~~~~~v~~i~~~p~~~~l~~~s~d~ 117 (371)
T d1k8kc_ 43 QVHEL-KEH--NGQVTGVDWAPDSNRIVTCGT--DRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSR 117 (371)
T ss_dssp EEEEE-ECC--SSCEEEEEEETTTTEEEEEET--TSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTTSSEEEEEETTS
T ss_pred EEEEe-cCC--CCCEEEEEECCCCCEEEEEEC--CCeEEEEeecccccccccccccccccccccccccccccceeecccC
Confidence 45566 443 445899999999999998776 99999999988754 455678999999998 899999999
Q ss_pred -eEEEEeCCcCceee---EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCC------------------CeEE
Q psy505 75 -YRLFSLNSIDTLEQ---IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRG------------------SEIC 132 (161)
Q Consensus 75 -iriwd~~~~~~~~~---~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~------------------~~i~ 132 (161)
+++|+.+....... ...+|.. .+.+++|+|++..+++++.|++|++||...+ +.+.
T Consensus 118 ~i~i~~~~~~~~~~~~~~~~~~~~~--~v~~v~~~p~~~~l~s~s~D~~v~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 195 (371)
T d1k8kc_ 118 VISICYFEQENDWWVCKHIKKPIRS--TVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMF 195 (371)
T ss_dssp SEEEEEEETTTTEEEEEEECTTCCS--CEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEE
T ss_pred cceeeeeeccccccccccccccccc--ccccccccccccceeccccCcEEEEEeeccCccccccccccccccccceeeee
Confidence 99999877654322 2223443 4778999999988999889999999998653 2333
Q ss_pred EEE-ecCceEEEEECCc--EEEEEecc
Q psy505 133 NYS-FSNTILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 133 ~l~-~~~~V~~v~~~~~--~~vv~~~~ 156 (161)
+.. +...|.+++|+|+ .++++..|
T Consensus 196 ~~~~~~~~v~~~~~s~~g~~l~s~~~d 222 (371)
T d1k8kc_ 196 ESSSSCGWVHGVCFSANGSRVAWVSHD 222 (371)
T ss_dssp ECCCCSSCEEEEEECSSSSEEEEEETT
T ss_pred eccCccCcEEEEEeecccccccccccC
Confidence 433 5678999999997 56666554
|
| >d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein 7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD repeat-containing protein 7, FBXW7 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.80 E-value=1.5e-18 Score=131.20 Aligned_cols=146 Identities=11% Similarity=0.134 Sum_probs=107.3
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-e
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-Y 75 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-i 75 (161)
+++..++ .+|.++. +.++++ +|.+||+++. ||+|+|||+.++++++++.+|.++|.+++ +|++|+.|+ +
T Consensus 6 ~~~~~~l-~GH~~~V-~s~~~~--~g~~l~sgs~--Dg~i~vWd~~~~~~~~~~~~h~~~V~~v~~~~~~l~s~s~D~~~ 79 (342)
T d2ovrb2 6 LKSPKVL-KGHDDHV-ITCLQF--CGNRIVSGSD--DNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTL 79 (342)
T ss_dssp CCCCEEE-ECSTTSC-EEEEEE--ETTEEEEEET--TSCEEEEETTTCCEEEECCCCSSCEEEEEEETTEEEEEETTSCE
T ss_pred CCcCEEE-CCcCCce-EEEEEE--CCCEEEEEeC--CCeEEEEECCCCCEEEEEeCCCCCEEEEEeCCCccccceecccc
Confidence 4677888 6776653 345655 7889998776 99999999999999999999999999999 899999999 9
Q ss_pred EEEEeCCcCceee-------------------------------------------------------------------
Q psy505 76 RLFSLNSIDTLEQ------------------------------------------------------------------- 88 (161)
Q Consensus 76 riwd~~~~~~~~~------------------------------------------------------------------- 88 (161)
++|+.........
T Consensus 80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i 159 (342)
T d2ovrb2 80 KVWNAETGECIHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVLMGHVAAVRCVQYDGRRVVSGAYDFMV 159 (342)
T ss_dssp EEEETTTTEEEEEECCCSSCEEEEEEETTEEEEEETTSEEEEEESSSCCEEEEEECCSSCEEEEEECSSCEEEEETTSCE
T ss_pred cccccccccceecccccceeEeeeecccccccccccceeEEEeecccccceeeeecccccceeeccccceeeeecCCCeE
Confidence 8888653211000
Q ss_pred ------------EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcEEEEEec
Q psy505 89 ------------IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKKEEEEDE 155 (161)
Q Consensus 89 ------------~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~~vv~~~ 155 (161)
.+.+|. ..+..+.+ ++..+++++.|++|++||++.++++..+. +...|.++.++++.++....
T Consensus 160 ~~~d~~~~~~~~~~~~~~--~~~~~~~~--~~~~l~s~~~dg~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~s~s~ 235 (342)
T d2ovrb2 160 KVWDPETETCLHTLQGHT--NRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSGNA 235 (342)
T ss_dssp EEEEGGGTEEEEEECCCS--SCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEECCCCSCEEEEEEETTEEEEEET
T ss_pred EEeecccceeeEEEcCcc--cccccccC--CCCEEEEEeCCCeEEEeecccceeeeEecccccceeEEecCCCEEEEEcC
Confidence 000010 11222223 33345666688999999999999988876 57889999999999888876
Q ss_pred c
Q psy505 156 E 156 (161)
Q Consensus 156 ~ 156 (161)
+
T Consensus 236 d 236 (342)
T d2ovrb2 236 D 236 (342)
T ss_dssp T
T ss_pred C
Confidence 5
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.79 E-value=3.7e-18 Score=132.98 Aligned_cols=138 Identities=16% Similarity=0.261 Sum_probs=109.8
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee------------------ccCccceeee------eEE
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP------------------AHDSPLAALA------SLS 68 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~------------------~H~~~V~~l~------~la 68 (161)
|...|.+++|+|||.+||++ + ||+|+|||+.+++.+..+. +|...|++++ +|+
T Consensus 61 H~~~V~~l~fs~dg~~lasg-~--d~~i~iW~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~V~~l~~s~~~~~l~ 137 (388)
T d1erja_ 61 HTSVVCCVKFSNDGEYLATG-C--NKTTQVYRVSDGSLVARLSDDSAANKDPENLNTSSSPSSDLYIRSVCFSPDGKFLA 137 (388)
T ss_dssp CSSCCCEEEECTTSSEEEEE-C--BSCEEEEETTTCCEEEEECC-----------------CCCCBEEEEEECTTSSEEE
T ss_pred CCCcEEEEEECCCCCEEEEE-e--CCeEEEEEecccceEeeecccccccccccccccccccCCCCCEEEEEECCCCCcce
Confidence 55679999999999999985 4 8999999999998877764 4566688888 899
Q ss_pred EecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECC
Q psy505 69 VGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNR 147 (161)
Q Consensus 69 sgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~ 147 (161)
+|+.|| |++||..+++.+ ....+|... +.++.|++++..++.++.++.+++||.++...+...........+.+++
T Consensus 138 s~~~dg~v~i~~~~~~~~~-~~~~~h~~~--v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~ 214 (388)
T d1erja_ 138 TGAEDRLIRIWDIENRKIV-MILQGHEQD--IYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSP 214 (388)
T ss_dssp EEETTSCEEEEETTTTEEE-EEECCCSSC--EEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEEEECSSCEEEEEECS
T ss_pred ecccccccccccccccccc-ccccccccc--ccccccccccccccccccceeeeeeeccccccccccccccccccccccC
Confidence 999999 999999987755 456677654 6677888887777777788999999999998887777777777777755
Q ss_pred -c--EEEEEecc
Q psy505 148 -K--KEEEEDEE 156 (161)
Q Consensus 148 -~--~~vv~~~~ 156 (161)
+ .+++...+
T Consensus 215 ~~~~~l~~~~~d 226 (388)
T d1erja_ 215 GDGKYIAAGSLD 226 (388)
T ss_dssp TTCCEEEEEETT
T ss_pred CCCCeEEEEcCC
Confidence 3 45554443
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.77 E-value=3.2e-18 Score=132.85 Aligned_cols=145 Identities=12% Similarity=0.054 Sum_probs=110.1
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~ 84 (161)
+...|.+++++|+|.++++.+...++.+++|+..+++++..+.+|..+|++++ ++++++.|| +++||.++++
T Consensus 114 ~~~~v~~v~~s~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~d~~v~~~d~~~~~ 193 (325)
T d1pgua1 114 LAGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFK 193 (325)
T ss_dssp CSSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECCSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBE
T ss_pred ccCcEEEEEECCCCCccceeeccccceEEEEeecccccceeeeecccccccccccccccceEEEeecccccccccccccc
Confidence 34468899999999888765532378899999999999999999999999998 578899999 9999998765
Q ss_pred ceeeEEeecCcceEEEEEeecCC-eEEEEecCCCCeEEEEecCCCCeEEEEE-ecCc----eEEEEECC-cEEEEEeccc
Q psy505 85 TLEQIYENSQEDVCIVERLFSSS-LVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNT----ILAVKLNR-KKEEEEDEEE 157 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~-~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~----V~~v~~~~-~~~vv~~~~~ 157 (161)
........+.....+.+++|+|+ +..+++++.|+.|++||.++++++..+. +..+ +.++.+.+ ..++.+..|+
T Consensus 194 ~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~~d~~i~iwd~~~~~~~~~l~~~~~~v~~~~~s~~~~dg~~l~s~s~D~ 273 (325)
T d1pgua1 194 FSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFATVGADA 273 (325)
T ss_dssp EEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEECCBTTBCCCSCEEEEEESSSSEEEEEETTS
T ss_pred cceecccccCCCCccEEeeeccccceeccccccccceeeeeeccccccccccccccccccceeeeeccCCCEEEEEeCCC
Confidence 43333222223345778899995 5667777789999999999999998886 3444 45555544 3677776654
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.76 E-value=2.7e-18 Score=129.53 Aligned_cols=108 Identities=12% Similarity=0.214 Sum_probs=88.8
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee-eeeccCccceeee----------------eEEEecCCc-
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT-MIPAHDSPLAALA----------------SLSVGTKSG- 74 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~-~l~~H~~~V~~l~----------------~lasgs~dg- 74 (161)
+...+.+++++||+.+|++++. ||.|++||+.+++.+. .+.+|..+|.+++ +||+|+.|+
T Consensus 161 ~~~~v~~~~~s~~~~~l~~g~~--dg~i~i~d~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~ 238 (287)
T d1pgua2 161 LRAKPSYISISPSETYIAAGDV--MGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTN 238 (287)
T ss_dssp CSSCEEEEEECTTSSEEEEEET--TSCEEEEETTTTEEEECCSCCCSSCEEEEEECCCC------CCSCCEEEEEETTSC
T ss_pred cCCceeEEEeccCccccccccc--cccccceeecccccccccccccccccceeeecccccccccccCCCCeeEeecCCCe
Confidence 3445889999999999998776 9999999999987654 4789999999985 799999999
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEec
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHF 125 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~ 125 (161)
|+|||++++......+.+|... |.+++|+|++. +++++.|++|+|||+
T Consensus 239 i~iw~~~~~~~~~~~~~~h~~~--V~~v~~~~~~~-l~s~g~D~~v~iW~i 286 (287)
T d1pgua2 239 IFIYSVKRPMKIIKALNAHKDG--VNNLLWETPST-LVSSGADACIKRWNV 286 (287)
T ss_dssp EEEEESSCTTCCEEETTSSTTC--EEEEEEEETTE-EEEEETTSCEEEEEE
T ss_pred EEEEECCCCCeEEEEeCCCCCC--eEEEEECCCCE-EEEEECCCeEEEEEE
Confidence 9999998755444566778754 67888999875 566668999999996
|
| >d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Tup1, C-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.76 E-value=2.8e-17 Score=127.92 Aligned_cols=140 Identities=14% Similarity=0.181 Sum_probs=110.4
Q ss_pred CCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcC
Q psy505 12 PNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSID 84 (161)
Q Consensus 12 ~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~ 84 (161)
.+...|.+++++|||.+|++++. ||.|++||..+++.+..+.+|.++|.+++ .+++|+.+| +++||.++..
T Consensus 119 ~~~~~V~~l~~s~~~~~l~s~~~--dg~v~i~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~ 196 (388)
T d1erja_ 119 SSDLYIRSVCFSPDGKFLATGAE--DRLIRIWDIENRKIVMILQGHEQDIYSLDYFPSGDKLVSGSGDRTVRIWDLRTGQ 196 (388)
T ss_dssp CCCCBEEEEEECTTSSEEEEEET--TSCEEEEETTTTEEEEEECCCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTE
T ss_pred CCCCCEEEEEECCCCCcceeccc--ccccccccccccccccccccccccccccccccccccccccccceeeeeeeccccc
Confidence 34556899999999999999776 99999999999999999999999999998 888999999 9999998865
Q ss_pred ceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE--------ecCceEEEEECCc--EEEEEe
Q psy505 85 TLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS--------FSNTILAVKLNRK--KEEEED 154 (161)
Q Consensus 85 ~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~--------~~~~V~~v~~~~~--~~vv~~ 154 (161)
.. .....+.. .+....+.+++..+++++.|+.|++||.++++.+..+. +.+.|.+++|+|+ .++++.
T Consensus 197 ~~-~~~~~~~~--~~~~~~~~~~~~~l~~~~~d~~i~i~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~s~~~~~l~s~~ 273 (388)
T d1erja_ 197 CS-LTLSIEDG--VTTVAVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGS 273 (388)
T ss_dssp EE-EEEECSSC--EEEEEECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEEEEEECTTSSEEEEEE
T ss_pred cc-cccccccc--cccccccCCCCCeEEEEcCCCeEEEeecccCccceeeccccccccCCCCCEEEEEECCCCCEEEEEE
Confidence 43 33333332 22233344577777777789999999999999887763 3468999999997 555554
Q ss_pred cc
Q psy505 155 EE 156 (161)
Q Consensus 155 ~~ 156 (161)
.+
T Consensus 274 ~d 275 (388)
T d1erja_ 274 LD 275 (388)
T ss_dssp TT
T ss_pred CC
Confidence 44
|
| >d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=99.75 E-value=7.1e-18 Score=127.63 Aligned_cols=137 Identities=12% Similarity=0.141 Sum_probs=105.7
Q ss_pred eeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee-eeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 16 GICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT-MIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~-~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
.+.+++++|++.++++++. ||.|++||+++++... ...+|.++|++++ +|++|+.|| |++||+.++....
T Consensus 138 ~~~~~~~s~~~~~l~~g~~--dg~i~~~d~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~~~~~~~~~~~~ 215 (299)
T d1nr0a2 138 NSSCVALSNDKQFVAVGGQ--DSKVHVYKLSGASVSEVKTIVHPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELA 215 (299)
T ss_dssp CEEEEEECTTSCEEEEEET--TSEEEEEEEETTEEEEEEEEECSSCEEEEEECTTSSEEEEEETTSCEEEEEGGGTTEES
T ss_pred ccccccccccccccccccc--ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3567788999999998776 9999999999877543 4568999999998 899999999 9999998876443
Q ss_pred e--EEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE---e-cCceEEEEECCc-EEEEEecc
Q psy505 88 Q--IYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS---F-SNTILAVKLNRK-KEEEEDEE 156 (161)
Q Consensus 88 ~--~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~---~-~~~V~~v~~~~~-~~vv~~~~ 156 (161)
. .+.+|.. .+.+++|+|++..+++++.|++|+|||+++++....+. + ...|..+.+.++ .++.+..|
T Consensus 216 ~~~~~~~h~~--~v~~l~~s~~~~~l~sgs~dg~i~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~l~s~s~D 289 (299)
T d1nr0a2 216 HTNSWTFHTA--KVACVSWSPDNVRLATGSLDNSVIVWNMNKPSDHPIIIKGAHAMSSVNSVIWLNETTIVSAGQD 289 (299)
T ss_dssp CCCCCCCCSS--CEEEEEECTTSSEEEEEETTSCEEEEETTCTTSCCEEETTSSTTSCEEEEEEEETTEEEEEETT
T ss_pred cccccccccc--ccccccccccccceEEEcCCCEEEEEECCCCCcceEEEecCCCCCcEEEEEECCCCEEEEEeCC
Confidence 2 2345554 47788999999889988899999999999876544432 2 356777777554 56666555
|
| >d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.74 E-value=1.6e-17 Score=128.81 Aligned_cols=147 Identities=11% Similarity=0.078 Sum_probs=104.2
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEE-EEcCCCCcceEEEEEcCCCCceeee---eccCccceeee-------eEEEec
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYL-AYPGSNSIGEVQIFDADNLHAKTMI---PAHDSPLAALA-------SLSVGT 71 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~l-a~~g~~~dg~v~iWd~~~~~~~~~l---~~H~~~V~~l~-------~lasgs 71 (161)
++.++ .. +...+.+++++|++.++ ++++. ||.|++||+.+++....+ .+|...|.+++ +|++|+
T Consensus 151 ~~~~~-~~--h~~~v~~~~~~~~~~~~~~~~~~--d~~v~~~d~~~~~~~~~~~~~~~~~~~v~~v~~~pd~~~~l~s~~ 225 (325)
T d1pgua1 151 SLGEV-SG--HSQRINACHLKQSRPMRSMTVGD--DGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVG 225 (325)
T ss_dssp EEEEC-CS--CSSCEEEEEECSSSSCEEEEEET--TTEEEEEETTTBEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEE
T ss_pred cceee-ee--cccccccccccccccceEEEeec--ccccccccccccccceecccccCCCCccEEeeeccccceeccccc
Confidence 34455 33 34558888889888764 44444 999999999987765544 57888899987 899999
Q ss_pred CCc-eEEEEeCCcCceeeEEeecCcceE--EEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-cC----ceEEE
Q psy505 72 KSG-YRLFSLNSIDTLEQIYENSQEDVC--IVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-SN----TILAV 143 (161)
Q Consensus 72 ~dg-iriwd~~~~~~~~~~~~~~~~~~~--v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-~~----~V~~v 143 (161)
.|| |++||+++++.+ ..+++|...+. +.++.+ |++..+++++.|++|+|||+++++++..+.. .. ...++
T Consensus 226 ~d~~i~iwd~~~~~~~-~~l~~~~~~v~~~~~s~~~-~dg~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~ 303 (325)
T d1pgua1 226 SDRKISCFDGKSGEFL-KYIEDDQEPVQGGIFALSW-LDSQKFATVGADATIRVWDVTTSKCVQKWTLDKQQLGNQQVGV 303 (325)
T ss_dssp TTCCEEEEETTTCCEE-EECCBTTBCCCSCEEEEEE-SSSSEEEEEETTSEEEEEETTTTEEEEEEECCTTCGGGCEEEE
T ss_pred cccceeeeeecccccc-ccccccccccccceeeeec-cCCCEEEEEeCCCeEEEEECCCCCEEEEEEecCCcccCeEEEE
Confidence 999 999999998866 45667764332 223333 4555667777899999999999999998863 22 34456
Q ss_pred EECCc-EEEEEecc
Q psy505 144 KLNRK-KEEEEDEE 156 (161)
Q Consensus 144 ~~~~~-~~vv~~~~ 156 (161)
.++++ .++.+..|
T Consensus 304 ~~~~~~~l~s~s~d 317 (325)
T d1pgua1 304 VATGNGRIISLSLD 317 (325)
T ss_dssp EEEETTEEEEEETT
T ss_pred EECCCCEEEEEECC
Confidence 66665 55555443
|
| >d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Antiviral protein Ski8 (Ski8p) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.72 E-value=3.4e-17 Score=129.71 Aligned_cols=127 Identities=13% Similarity=0.132 Sum_probs=95.1
Q ss_pred ceEEEEcCCCCcceEEEEEcCCCC------------------ceeeeeccCccceeee-----eEEEecCCc-eEEEEeC
Q psy505 26 NCYLAYPGSNSIGEVQIFDADNLH------------------AKTMIPAHDSPLAALA-----SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 26 ~~~la~~g~~~dg~v~iWd~~~~~------------------~~~~l~~H~~~V~~l~-----~lasgs~dg-iriwd~~ 81 (161)
+.++++++. ||++++||+.... .......|...+.+++ +||+|+.|| |||||++
T Consensus 136 ~~~~~~~~~--dg~i~vw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~lasgs~Dg~i~iwd~~ 213 (393)
T d1sq9a_ 136 SHRLVATDV--KGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISERGLIATGFNNGTVQISELS 213 (393)
T ss_dssp CEEEEEEET--TSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTTSEEEEECTTSEEEEEETT
T ss_pred ccEEEEEcC--CCcEEEEEeecCCcccceeeeeeccceecccceecccCCCCcEEEEEECCCCEEEEEeCCCcEEEEeec
Confidence 567777665 9999999986431 1112234556677777 899999999 9999999
Q ss_pred CcCceeeE-----EeecCcceEEEEEeecCCeEEEEecCCCC---eEEEEecCCCCeEEEEE--------------ecCc
Q psy505 82 SIDTLEQI-----YENSQEDVCIVERLFSSSLVAVVSLSSPR---KLTVCHFKRGSEICNYS--------------FSNT 139 (161)
Q Consensus 82 ~~~~~~~~-----~~~~~~~~~v~~~~fs~~~~~~~s~~~d~---~i~iWD~~~~~~i~~l~--------------~~~~ 139 (161)
+++++..+ +.+|.. .|.+++|+|++..+++++.|+ .|+|||+++++++..+. |.+.
T Consensus 214 ~~~~~~~~~~~~~l~~h~~--~V~~l~~spdg~~l~sgs~D~t~~~i~lwd~~~g~~~~~l~~~~~~~~~~~~~~gH~~~ 291 (393)
T d1sq9a_ 214 TLRPLYNFESQHSMINNSN--SIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLSVPTHSSQASLGEFAHSSW 291 (393)
T ss_dssp TTEEEEEEECCC---CCCC--CEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEECBC--------CCBSBSSC
T ss_pred ccccccccccccccccccc--eEEEcccccccceeeeecCCCCcceeeecccccceeeeeeccccccccceeeeecccCc
Confidence 88765322 234543 478899999998899987776 49999999999988874 6678
Q ss_pred eEEEEECCc--EEEEEecc
Q psy505 140 ILAVKLNRK--KEEEEDEE 156 (161)
Q Consensus 140 V~~v~~~~~--~~vv~~~~ 156 (161)
|++++|+|+ .|+.+..|
T Consensus 292 V~~l~fspd~~~l~S~s~D 310 (393)
T d1sq9a_ 292 VMSLSFNDSGETLCSAGWD 310 (393)
T ss_dssp EEEEEECSSSSEEEEEETT
T ss_pred eeeeccCCCCCeeEEECCC
Confidence 999999997 55555544
|
| >d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: Actin interacting protein 1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.71 E-value=4.1e-17 Score=122.87 Aligned_cols=136 Identities=12% Similarity=0.111 Sum_probs=101.8
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee------eEEEecCCc-eEEEEeCCcCceee
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
..++++ ++..+++++.. ++.|++|++.+.+....+. .|..+|++++ +|++|+.|| |++||+.+++....
T Consensus 123 ~~~~~~--~~~~~~v~~~~-~~~v~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~g~~dg~i~i~d~~~~~~~~~ 199 (287)
T d1pgua2 123 GSAVSL--SQNYVAVGLEE-GNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAGDVMGKILLYDLQSREVKTS 199 (287)
T ss_dssp EEEEEE--CSSEEEEEETT-TSCEEEEETTEEEEEEECSSCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEC
T ss_pred eeeeec--cCcceeeeccc-cceeeeeeccccceeeeeeeccCCceeEEEeccCccccccccccccccceeecccccccc
Confidence 334444 66677776662 5689999998776655554 5888999998 899999999 99999988765544
Q ss_pred EEeecCcceEEEEEeecCCe----------EEEEecCCCCeEEEEecCC-CCeEEEEE-ecCceEEEEECCc-EEEEEec
Q psy505 89 IYENSQEDVCIVERLFSSSL----------VAVVSLSSPRKLTVCHFKR-GSEICNYS-FSNTILAVKLNRK-KEEEEDE 155 (161)
Q Consensus 89 ~~~~~~~~~~v~~~~fs~~~----------~~~~s~~~d~~i~iWD~~~-~~~i~~l~-~~~~V~~v~~~~~-~~vv~~~ 155 (161)
.+.+|... +.+++|+|++ ..+++++.|++|+|||+++ ++++..+. |.+.|.++.|+|+ .++.+..
T Consensus 200 ~~~~h~~~--v~~~~~~p~~~~~~~~~~~~~~l~sgs~D~~i~iw~~~~~~~~~~~~~~h~~~V~~v~~~~~~~l~s~g~ 277 (287)
T d1pgua2 200 RWAFRTSK--INAISWKPAEKGANEEEIEEDLVATGSLDTNIFIYSVKRPMKIIKALNAHKDGVNNLLWETPSTLVSSGA 277 (287)
T ss_dssp CSCCCSSC--EEEEEECCCC------CCSCCEEEEEETTSCEEEEESSCTTCCEEETTSSTTCEEEEEEEETTEEEEEET
T ss_pred cccccccc--cceeeecccccccccccCCCCeeEeecCCCeEEEEECCCCCeEEEEeCCCCCCeEEEEECCCCEEEEEEC
Confidence 55677654 6778888643 4577888899999999987 45555554 7889999999987 5666666
Q ss_pred cc
Q psy505 156 EE 157 (161)
Q Consensus 156 ~~ 157 (161)
|.
T Consensus 278 D~ 279 (287)
T d1pgua2 278 DA 279 (287)
T ss_dssp TS
T ss_pred CC
Confidence 53
|
| >d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: WD40-repeat domain: F-box/WD-repeat protein 1 (beta-TRCP1) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.66 E-value=8e-16 Score=113.46 Aligned_cols=136 Identities=11% Similarity=0.180 Sum_probs=103.0
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee----eEEEecCCc-eEEEEeCCcCcee
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~lasgs~dg-iriwd~~~~~~~~ 87 (161)
+...+..+.+.++ .+++.+. ||.|++||+++++++..+.+|...|..+. ++++|+.|| |++||++++..+
T Consensus 137 ~~~~v~~~~~~~~--~~~~~s~--d~~i~~~d~~~~~~~~~~~~~~~~v~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~- 211 (293)
T d1p22a2 137 HRAAVNVVDFDDK--YIVSASG--DRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACL- 211 (293)
T ss_dssp CSSCEEEEEEETT--EEEEEET--TSEEEEEETTTCCEEEEEECCSSCEEEEEEETTEEEEEETTSCEEEEETTTCCEE-
T ss_pred cccccccceeccc--ccccccC--CCceeeecCCCCcEEEEEcccccccccccCCCCeEEEecCCCEEEEEecccceee-
Confidence 3445666665443 4455454 99999999999999999999999998888 999999999 999999987765
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCC---------CCeEEEEE-ecCceEEEEECCcEEEEEeccc
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKR---------GSEICNYS-FSNTILAVKLNRKKEEEEDEEE 157 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~---------~~~i~~l~-~~~~V~~v~~~~~~~vv~~~~~ 157 (161)
..+.++... +..+ +++...+++++.|++|+|||+.+ ..++..+. |.+.|++++|++..++.+..|.
T Consensus 212 ~~~~~~~~~--v~~~--~~~~~~l~sg~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~H~~~V~~v~~d~~~l~s~s~Dg 287 (293)
T d1p22a2 212 RVLEGHEEL--VRCI--RFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFRLQFDEFQIVSSSHDD 287 (293)
T ss_dssp EEECCCSSC--EEEE--ECCSSEEEEEETTSCEEEEEHHHHTSTTSCTTTTEEEEECCCSSCCCCEEECSSCEEECCSSS
T ss_pred eeeccccee--eeec--cccceEEEEEcCCCEEEEEECCCCccccccCCceeeEEecCCCCCEEEEEEcCCEEEEEecCC
Confidence 455566543 3443 44444566667899999999754 34667775 6789999999999988887764
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.64 E-value=2e-15 Score=115.46 Aligned_cols=139 Identities=11% Similarity=-0.020 Sum_probs=108.3
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCc
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~ 85 (161)
++..+.+++|+|||+.|++++...+..|++||+.+++. ..+.+|...|.+++ +|++++.++ +++|++.+++.
T Consensus 41 ~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~-~~~~~~~~~v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~ 119 (360)
T d1k32a3 41 EPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKA-EKFEENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLETGKP 119 (360)
T ss_dssp CCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCE-EECCCCCCSEEEEEECTTSSEEEEEETTSEEEEEETTTCCE
T ss_pred CCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcE-EEeeCCCceEEeeeecccccccceeccccccccccccccce
Confidence 55679999999999999987763123799999998665 57789999999998 899999999 99999998765
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEe----------cCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--EEEEE
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVS----------LSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--KEEEE 153 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s----------~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~~vv~ 153 (161)
. ..+..|.. .+.+++|+|++..++. +..++.+++||.++++......+...+..+.|+|+ .++..
T Consensus 120 ~-~~~~~~~~--~~~~~~~spdg~~la~~~~~~~~~~~~~~~~~~~v~d~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~ 196 (360)
T d1k32a3 120 T-VIERSREA--MITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEGRKIFAATTENSHDYAPAFDADSKNLYYL 196 (360)
T ss_dssp E-EEEECSSS--CCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTTTEEEECSCSSSBEEEEEECTTSCEEEEE
T ss_pred e-eeeecccc--cccchhhccceeeeeeeccccccceeeccccceeeeccccCceeeecccccccccccccCCCCEEEEE
Confidence 4 55666653 3557889998877763 34566799999999887655566788999999998 45544
Q ss_pred ec
Q psy505 154 DE 155 (161)
Q Consensus 154 ~~ 155 (161)
..
T Consensus 197 s~ 198 (360)
T d1k32a3 197 SY 198 (360)
T ss_dssp ES
T ss_pred eC
Confidence 43
|
| >d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Tricorn protease domain 2 family: Tricorn protease domain 2 domain: Tricorn protease domain 2 species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=99.62 E-value=1.7e-15 Score=115.85 Aligned_cols=121 Identities=10% Similarity=0.105 Sum_probs=96.9
Q ss_pred eecCC-CceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEE-ecCCc--eEEEEeCCcCceeeE
Q psy505 20 LCVNS-DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSV-GTKSG--YRLFSLNSIDTLEQI 89 (161)
Q Consensus 20 ~~~~~-d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~las-gs~dg--iriwd~~~~~~~~~~ 89 (161)
--||| ||+++|+++ +|.|.+||+.++..++. +|.+.|.+++ .|++ +.++| +++||.++++.. .
T Consensus 8 ~~fSP~dG~~~a~~~---~g~v~v~d~~~~~~~~~--~~~~~v~~~~~spDg~~l~~~~~~~g~~v~v~d~~~~~~~--~ 80 (360)
T d1k32a3 8 EDFSPLDGDLIAFVS---RGQAFIQDVSGTYVLKV--PEPLRIRYVRRGGDTKVAFIHGTREGDFLGIYDYRTGKAE--K 80 (360)
T ss_dssp EEEEECGGGCEEEEE---TTEEEEECTTSSBEEEC--SCCSCEEEEEECSSSEEEEEEEETTEEEEEEEETTTCCEE--E
T ss_pred ccccCCCCCEEEEEE---CCeEEEEECCCCcEEEc--cCCCCEEEEEECCCCCEEEEEEcCCCCEEEEEECCCCcEE--E
Confidence 44688 999999865 68999999998776553 7999999999 5554 44555 999999987642 3
Q ss_pred EeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECCcE
Q psy505 90 YENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNRKK 149 (161)
Q Consensus 90 ~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~~ 149 (161)
+.+|... +..++|+|++..+++++.++.+++||+.++++...+. +...+.+++|+|++
T Consensus 81 ~~~~~~~--v~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~spdg 139 (360)
T d1k32a3 81 FEENLGN--VFAMGVDRNGKFAVVANDRFEIMTVDLETGKPTVIERSREAMITDFTISDNS 139 (360)
T ss_dssp CCCCCCS--EEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEEECSSSCCCCEEECTTS
T ss_pred eeCCCce--EEeeeecccccccceeccccccccccccccceeeeeecccccccchhhccce
Confidence 3455443 6788999999888888889999999999999888777 46789999999984
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.55 E-value=4.4e-13 Score=99.91 Aligned_cols=144 Identities=16% Similarity=0.155 Sum_probs=107.6
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCC
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKS 73 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~d 73 (161)
+|+++++ ....+| ..++++|||++|+.++.. ++.|++||+.+++.+.++..|..+ .+++ +++++..+
T Consensus 22 ~~~~~~i-~~g~~p---~~va~spdG~~l~v~~~~-~~~i~v~d~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~ 95 (301)
T d1l0qa2 22 NKVTATI-PVGSNP---MGAVISPDGTKVYVANAH-SNDVSIIDTATNNVIATVPAGSSP-QGVAVSPDGKQVYVTNMAS 95 (301)
T ss_dssp TEEEEEE-ECSSSE---EEEEECTTSSEEEEEEGG-GTEEEEEETTTTEEEEEEECSSSE-EEEEECTTSSEEEEEETTT
T ss_pred CeEEEEE-ECCCCc---eEEEEeCCCCEEEEEECC-CCEEEEEECCCCceeeeeeccccc-ccccccccccccccccccc
Confidence 3567777 455444 567889999988655553 899999999999999999988764 5555 55666677
Q ss_pred c-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEE-EEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc--E
Q psy505 74 G-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVA-VVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK--K 149 (161)
Q Consensus 74 g-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~-~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~--~ 149 (161)
+ +++||..+++.. .....+.. ...+.|+|++.. ++++..++.+.+||..+++.+..+.....+..++++|+ .
T Consensus 96 ~~~~~~~~~~~~~~-~~~~~~~~---~~~~~~~~dg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 171 (301)
T d1l0qa2 96 STLSVIDTTSNTVA-GTVKTGKS---PLGLALSPDGKKLYVTNNGDKTVSVINTVTKAVINTVSVGRSPKGIAVTPDGTK 171 (301)
T ss_dssp TEEEEEETTTTEEE-EEEECSSS---EEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEECCSSEEEEEECTTSSE
T ss_pred ceeeecccccceee-eecccccc---ceEEEeecCCCeeeeeeccccceeeeeccccceeeecccCCCceEEEeeccccc
Confidence 7 999999887654 34444432 456778887654 35566788999999999999988888888899999987 3
Q ss_pred EEEEe
Q psy505 150 EEEED 154 (161)
Q Consensus 150 ~vv~~ 154 (161)
++++.
T Consensus 172 ~~~~~ 176 (301)
T d1l0qa2 172 VYVAN 176 (301)
T ss_dssp EEEEE
T ss_pred eeeec
Confidence 44443
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.53 E-value=4.1e-13 Score=108.42 Aligned_cols=147 Identities=12% Similarity=0.087 Sum_probs=104.9
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCce--eee---eccCccceeee-------eEEE
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAK--TMI---PAHDSPLAALA-------SLSV 69 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~--~~l---~~H~~~V~~l~-------~las 69 (161)
+++.++ .++. .+..++|+|||+++++++. ||+|++||+.+++.. ..+ .+|.+.+.+.. ++++
T Consensus 53 ~v~~~~-~~g~---~~~~v~fSpDG~~l~~~s~--dg~v~~~d~~t~~~~~~~~i~~~~~~~~~~~s~~~SpDG~~l~vs 126 (432)
T d1qksa2 53 EIKTVL-DTGY---AVHISRLSASGRYLFVIGR--DGKVNMIDLWMKEPTTVAEIKIGSEARSIETSKMEGWEDKYAIAG 126 (432)
T ss_dssp CEEEEE-ECSS---CEEEEEECTTSCEEEEEET--TSEEEEEETTSSSCCEEEEEECCSEEEEEEECCSTTCTTTEEEEE
T ss_pred cEEEEE-eCCC---CeeEEEECCCCCEEEEEcC--CCCEEEEEeeCCCceEEEEEecCCCCCCeEEecccCCCCCEEEEE
Confidence 577788 4543 4778899999999998765 999999999988743 333 36777777664 4578
Q ss_pred ecCCc-eEEEEeCCcCceeeEEeecC---------cceEEEEEeecCCeE-EEEecCCCCeEEEEecCCCCeEEE--EEe
Q psy505 70 GTKSG-YRLFSLNSIDTLEQIYENSQ---------EDVCIVERLFSSSLV-AVVSLSSPRKLTVCHFKRGSEICN--YSF 136 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~~~~~~~~~---------~~~~v~~~~fs~~~~-~~~s~~~d~~i~iWD~~~~~~i~~--l~~ 136 (161)
++.++ ++|||.++++++. .+.++. .......+.++|++. .+++.++++.|.+||..+++.... +..
T Consensus 127 ~~~~~~v~i~d~~t~~~~~-~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~~~~~i~~~d~~~~~~~~~~~i~~ 205 (432)
T d1qksa2 127 AYWPPQYVIMDGETLEPKK-IQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNNLKTTEISA 205 (432)
T ss_dssp EEETTEEEEEETTTCCEEE-EEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSEEEEEEEEC
T ss_pred cCCCCeEEEEeCcccccee-eeccCCccccceeccCCCceeEEEECCCCCEEEEEEccCCeEEEEEccCCCcceEEEEcc
Confidence 88888 9999999988653 444331 111244567888663 445666788999999998876543 444
Q ss_pred cCceEEEEECCc--EEEEEec
Q psy505 137 SNTILAVKLNRK--KEEEEDE 155 (161)
Q Consensus 137 ~~~V~~v~~~~~--~~vv~~~ 155 (161)
...+.+++|+|+ .++++..
T Consensus 206 g~~~~~~~~spdg~~~~va~~ 226 (432)
T d1qksa2 206 ERFLHDGGLDGSHRYFITAAN 226 (432)
T ss_dssp CSSEEEEEECTTSCEEEEEEG
T ss_pred cCccccceECCCCCEEEEecc
Confidence 567899999998 3555543
|
| >d1qksa2 b.70.2.1 (A:136-567) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Paracoccus denitrificans [TaxId: 266]
Probab=99.49 E-value=2.6e-13 Score=109.60 Aligned_cols=133 Identities=11% Similarity=0.009 Sum_probs=94.9
Q ss_pred eecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee--eEE
Q psy505 20 LCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE--QIY 90 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~--~~~ 90 (161)
...+++...+++-+. ||+|+|||+.+++++..|..|. .+.+++ ++++++.|| +++||+.+++... ++.
T Consensus 26 ~~~~~~~~~~v~~~d--~g~v~v~D~~t~~v~~~~~~g~-~~~~v~fSpDG~~l~~~s~dg~v~~~d~~t~~~~~~~~i~ 102 (432)
T d1qksa2 26 NDWDLENLFSVTLRD--AGQIALIDGSTYEIKTVLDTGY-AVHISRLSASGRYLFVIGRDGKVNMIDLWMKEPTTVAEIK 102 (432)
T ss_dssp SCCCGGGEEEEEETT--TTEEEEEETTTCCEEEEEECSS-CEEEEEECTTSCEEEEEETTSEEEEEETTSSSCCEEEEEE
T ss_pred ecCCCCcEEEEEEcC--CCEEEEEECCCCcEEEEEeCCC-CeeEEEECCCCCEEEEEcCCCCEEEEEeeCCCceEEEEEe
Confidence 334445444455444 9999999999999999999885 578887 889999999 9999998876431 222
Q ss_pred eecCcceEEEEEeecCCeEE-EEecCCCCeEEEEecCCCCeEEEEEe------------cCceEEEEECCc--EEEEEec
Q psy505 91 ENSQEDVCIVERLFSSSLVA-VVSLSSPRKLTVCHFKRGSEICNYSF------------SNTILAVKLNRK--KEEEEDE 155 (161)
Q Consensus 91 ~~~~~~~~v~~~~fs~~~~~-~~s~~~d~~i~iWD~~~~~~i~~l~~------------~~~V~~v~~~~~--~~vv~~~ 155 (161)
.+..+.-.+.+.+||||+.. +++++.+++|+|||.++++++..+.. .+...++.++|+ .+++.+.
T Consensus 103 ~~~~~~~~~~s~~~SpDG~~l~vs~~~~~~v~i~d~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~dg~~~~vs~~ 182 (432)
T d1qksa2 103 IGSEARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVK 182 (432)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEET
T ss_pred cCCCCCCeEEecccCCCCCEEEEEcCCCCeEEEEeCccccceeeeccCCccccceeccCCCceeEEEECCCCCEEEEEEc
Confidence 22221123456678888864 47777899999999999998877642 235677888886 3555443
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.49 E-value=7.1e-14 Score=111.78 Aligned_cols=113 Identities=10% Similarity=0.012 Sum_probs=83.1
Q ss_pred eecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCcee--eEE
Q psy505 20 LCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE--QIY 90 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~--~~~ 90 (161)
++.++...++++... ||+|+|||+.+++.+.+|++|.. +.+++ ++++++.|| +++||+.++++.. ++.
T Consensus 26 ~~~d~~~~~~V~~~~--dg~v~vwD~~t~~~~~~l~~g~~-~~~vafSPDGk~l~~~~~d~~v~vwd~~t~~~~~~~~i~ 102 (426)
T d1hzua2 26 NDLDLPNLFSVTLRD--AGQIALVDGDSKKIVKVIDTGYA-VHISRMSASGRYLLVIGRDARIDMIDLWAKEPTKVAEIK 102 (426)
T ss_dssp SCCCGGGEEEEEETT--TTEEEEEETTTCSEEEEEECCSS-EEEEEECTTSCEEEEEETTSEEEEEETTSSSCEEEEEEE
T ss_pred ccCCCCeEEEEEEcC--CCEEEEEECCCCcEEEEEeCCCC-eeEEEECCCCCEEEEEeCCCCEEEEEccCCceeEEEEEe
Confidence 444444445555443 99999999999999999998854 78888 888999999 9999999987542 121
Q ss_pred eecCcceEEEEEeecCCeEEE-EecCCCCeEEEEecCCCCeEEEEE
Q psy505 91 ENSQEDVCIVERLFSSSLVAV-VSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 91 ~~~~~~~~v~~~~fs~~~~~~-~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
.+..+.-.+.+++|+|++..+ ++++.++++++||.++++++..+.
T Consensus 103 ~~~~~~~~~~s~~~spDG~~l~v~~~~~~~v~i~d~~~~~~~~~~~ 148 (426)
T d1hzua2 103 IGIEARSVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS 148 (426)
T ss_dssp CCSEEEEEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE
T ss_pred CCCCCcceEEeeeecCCCCEEEEeecCCCeEEEEcCCccceeEEee
Confidence 122222235677888888654 555678999999999999887664
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.38 E-value=2.1e-11 Score=91.67 Aligned_cols=55 Identities=11% Similarity=-0.107 Sum_probs=40.7
Q ss_pred CcceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeecc
Q psy505 1 MKVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAH 57 (161)
Q Consensus 1 ~~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H 57 (161)
+++++++ ..+....++.+++++|||+++++++.. +|.|.+||+.+++.+..+..+
T Consensus 21 ~~~~~~i-~~~~~~~~~~~i~~spDg~~l~v~~~~-~~~v~v~D~~t~~~~~~~~~~ 75 (337)
T d1pbyb_ 21 MAVDKVI-TIADAGPTPMVPMVAPGGRIAYATVNK-SESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp TEEEEEE-ECTTCTTCCCCEEECTTSSEEEEEETT-TTEEEEEETTTCCEEEEEECC
T ss_pred CeEEEEE-ECCCCCCCccEEEECCCCCEEEEEECC-CCeEEEEECCCCcEEEEEecC
Confidence 4667777 444444456678889999988555553 899999999999988777654
|
| >d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: WD40 repeat-like family: Cell cycle arrest protein BUB3 domain: Cell cycle arrest protein BUB3 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.34 E-value=5.1e-12 Score=94.11 Aligned_cols=85 Identities=5% Similarity=0.053 Sum_probs=67.0
Q ss_pred CceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEe--ecCcceEEEEEeecCC-eEEEEecCCCC
Q psy505 49 HAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYE--NSQEDVCIVERLFSSS-LVAVVSLSSPR 118 (161)
Q Consensus 49 ~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~--~~~~~~~v~~~~fs~~-~~~~~s~~~d~ 118 (161)
+.++..+||++.|++|+ +||+||.|| |||||++++.....+.. +|.+ .|.+++|+|+ ...+++++.|+
T Consensus 2 ~~v~~~~~h~d~I~~l~fsp~~~~L~s~s~Dg~v~iwd~~~~~~~~~~~~~~~h~~--~V~~v~f~~~~~~~l~sg~~d~ 79 (342)
T d1yfqa_ 2 QIVQIEQAPKDYISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKH--PLLCCNFIDNTDLQIYVGTVQG 79 (342)
T ss_dssp EEEECSSCCSSCEEEEEEEGGGTEEEEEETTSEEEEEEEETTTTEEEEEEEEECSS--CEEEEEEEESSSEEEEEEETTS
T ss_pred CeEEcCCCCCCCEEEEEEeCCCCEEEEEECCCeEEEEEccCCCcceEEEEecCCCC--CEEEEEEeCCCCCEEEEccccc
Confidence 45677899999999999 999999999 99999987654333332 4654 4778889874 56677888899
Q ss_pred eEEEEecCCCCeEEEEE
Q psy505 119 KLTVCHFKRGSEICNYS 135 (161)
Q Consensus 119 ~i~iWD~~~~~~i~~l~ 135 (161)
+|++||...+.......
T Consensus 80 ~v~~w~~~~~~~~~~~~ 96 (342)
T d1yfqa_ 80 EILKVDLIGSPSFQALT 96 (342)
T ss_dssp CEEEECSSSSSSEEECB
T ss_pred ceeeeeccccccccccc
Confidence 99999999888776654
|
| >d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Paracoccus denitrificans [TaxId: 266]
Probab=99.33 E-value=6.6e-12 Score=94.44 Aligned_cols=119 Identities=13% Similarity=0.164 Sum_probs=89.0
Q ss_pred eEEEEcCCCCcceEEEEEcCCCCceeeeeccC--ccceeee-------eEEEecCCc-eEEEEeCCcCceeeEEeecCcc
Q psy505 27 CYLAYPGSNSIGEVQIFDADNLHAKTMIPAHD--SPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQED 96 (161)
Q Consensus 27 ~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~--~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~ 96 (161)
.++++++. |++|+|||+.+++.++++..+. ..+.+++ ++++++.++ |++||+++++.+.. ...+...
T Consensus 2 ~~~vt~~~--d~~v~v~D~~s~~~~~~i~~~~~~~~~~~i~~spDg~~l~v~~~~~~~v~v~D~~t~~~~~~-~~~~~~~ 78 (337)
T d1pbyb_ 2 DYILAPAR--PDKLVVIDTEKMAVDKVITIADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGR-IDLSTPE 78 (337)
T ss_dssp EEEEEEET--TTEEEEEETTTTEEEEEEECTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEE-EECCBTT
T ss_pred eEEEEEcC--CCEEEEEECCCCeEEEEEECCCCCCCccEEEECCCCCEEEEEECCCCeEEEEECCCCcEEEE-EecCCCc
Confidence 36777665 9999999999999999997643 4456776 446788888 99999999886543 3333211
Q ss_pred ---eEEEEEeecCCeEEEEec------------CCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 97 ---VCIVERLFSSSLVAVVSL------------SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 97 ---~~v~~~~fs~~~~~~~s~------------~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
.....++|+|++..++.+ ..+..+.+||..+++.+..+.....+.++.|+|+
T Consensus 79 ~~~~~~~~v~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~s~d 145 (337)
T d1pbyb_ 79 ERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAFEAPRQITMLAWARD 145 (337)
T ss_dssp EEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEEECCSSCCCEEECTT
T ss_pred ccccceeeEEEcCCCcEEEEeecCCcceeeeccccccceeeccccCCeEEEeccccCCceEEEEcCC
Confidence 122367888877555433 2467899999999999988888888999999998
|
| >d1hzua2 b.70.2.1 (A:118-543) C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase family: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase domain: C-terminal (heme d1) domain of cytochrome cd1-nitrite reductase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.32 E-value=3.1e-11 Score=96.09 Aligned_cols=140 Identities=12% Similarity=0.107 Sum_probs=88.5
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceee--e---eccCccceeee------eE-EE
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTM--I---PAHDSPLAALA------SL-SV 69 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~--l---~~H~~~V~~l~------~l-as 69 (161)
+++++| ..+. ++.+++|+|||+++++++. ||+|++||+.++++... + .+|.+.+.+++ ++ ++
T Consensus 53 ~~~~~l-~~g~---~~~~vafSPDGk~l~~~~~--d~~v~vwd~~t~~~~~~~~i~~~~~~~~~~~s~~~spDG~~l~v~ 126 (426)
T d1hzua2 53 KIVKVI-DTGY---AVHISRMSASGRYLLVIGR--DARIDMIDLWAKEPTKVAEIKIGIEARSVESSKFKGYEDRYTIAG 126 (426)
T ss_dssp SEEEEE-ECCS---SEEEEEECTTSCEEEEEET--TSEEEEEETTSSSCEEEEEEECCSEEEEEEECCSTTCTTTEEEEE
T ss_pred cEEEEE-eCCC---CeeEEEECCCCCEEEEEeC--CCCEEEEEccCCceeEEEEEeCCCCCcceEEeeeecCCCCEEEEe
Confidence 577888 5543 4778899999999988765 99999999999986433 2 36777777765 44 55
Q ss_pred ecCCc-eEEEEeCCcCceeeEEeecCcce---------EEEEEeecCCeEEE-EecCCCCeEEEEecCCCCeE--EEEEe
Q psy505 70 GTKSG-YRLFSLNSIDTLEQIYENSQEDV---------CIVERLFSSSLVAV-VSLSSPRKLTVCHFKRGSEI--CNYSF 136 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~~~~~~~~~~~~---------~v~~~~fs~~~~~~-~s~~~d~~i~iWD~~~~~~i--~~l~~ 136 (161)
+..++ +++||.+++++. ....+|...+ ....+.+++++..+ .+..+.+.+.+++...+..+ ..+..
T Consensus 127 ~~~~~~v~i~d~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~i~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~ 205 (426)
T d1hzua2 127 AYWPPQFAIMDGETLEPK-QIVSTRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSIGA 205 (426)
T ss_dssp EEESSEEEEEETTTCCEE-EEEECCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECSSSSSCEEEEEEC
T ss_pred ecCCCeEEEEcCCcccee-EEeeccCCCccceeecCCCceeEEEECCCCCEEEEecCCCCeEEEEEeccccceeeEEecc
Confidence 55677 999999998755 4444443111 11222333333222 12233445656665554432 23445
Q ss_pred cCceEEEEECCc
Q psy505 137 SNTILAVKLNRK 148 (161)
Q Consensus 137 ~~~V~~v~~~~~ 148 (161)
...+..+.|+|+
T Consensus 206 ~~~~~~~~~~~~ 217 (426)
T d1hzua2 206 APFLADGGWDSS 217 (426)
T ss_dssp CSSEEEEEECTT
T ss_pred CCccEeeeECCC
Confidence 677889999887
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.30 E-value=3.4e-12 Score=96.42 Aligned_cols=137 Identities=9% Similarity=0.028 Sum_probs=96.2
Q ss_pred eecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee-ccCccceeee-------eEEEecCCc-eEEEEeCCcCceeeEE
Q psy505 20 LCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP-AHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIY 90 (161)
Q Consensus 20 ~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~-~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~ 90 (161)
+++++++.++++++. |++|.+||+.+++.+.+++ .|...+.+++ ++++++.++ |++||+.+++......
T Consensus 2 ~a~~~~~~~l~~~~~--~~~v~v~D~~t~~~~~t~~~~~~~~p~~l~~spDG~~l~v~~~~~~~v~~~d~~t~~~~~~~~ 79 (346)
T d1jmxb_ 2 PALKAGHEYMIVTNY--PNNLHVVDVASDTVYKSCVMPDKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKNTFHAN 79 (346)
T ss_dssp CCCCTTCEEEEEEET--TTEEEEEETTTTEEEEEEECSSCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE
T ss_pred ccCCCCCcEEEEEcC--CCEEEEEECCCCCEEEEEEcCCCCCcceEEECCCCCEEEEEECCCCcEEEEeCccCeeeeeec
Confidence 467889999999776 8999999999999999987 4556677777 557788888 9999999987553332
Q ss_pred eecCc---ceEEEEEeecCCeEEEEec------------CCCCeEEEEecCCCCeEEEEE---ecCceEEEEECCcEEEE
Q psy505 91 ENSQE---DVCIVERLFSSSLVAVVSL------------SSPRKLTVCHFKRGSEICNYS---FSNTILAVKLNRKKEEE 152 (161)
Q Consensus 91 ~~~~~---~~~v~~~~fs~~~~~~~s~------------~~d~~i~iWD~~~~~~i~~l~---~~~~V~~v~~~~~~~vv 152 (161)
.+... ......++|+|++..+... ..+..+.+||..+++....+. .+..+..+.++++..+.
T Consensus 80 ~~~~~~~~~~~~~~v~~s~DG~~l~v~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 159 (346)
T d1jmxb_ 80 LSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPVRTFPMPRQVYLMRAADDGSLY 159 (346)
T ss_dssp SCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCSEEEECCSSCCCEEECTTSCEE
T ss_pred ccccccccCCceEEEEEecCCCEEEEEecCCcceeeeeccCcceEEEEecccceeeeEEEeeeccCceEEEEecCCCEEE
Confidence 22111 1123467899987544322 246789999999887654432 34567777788876655
Q ss_pred Eeccce
Q psy505 153 EDEEEE 158 (161)
Q Consensus 153 ~~~~~~ 158 (161)
+....+
T Consensus 160 ~~~~~~ 165 (346)
T d1jmxb_ 160 VAGPDI 165 (346)
T ss_dssp EESSSE
T ss_pred EeCCcc
Confidence 555443
|
| >d1l0qa2 b.69.2.3 (A:1-301) Surface layer protein {Archaeon Methanosarcina mazei [TaxId: 2209]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: YVTN repeat domain: Surface layer protein species: Archaeon Methanosarcina mazei [TaxId: 2209]
Probab=99.28 E-value=1.6e-10 Score=85.59 Aligned_cols=107 Identities=9% Similarity=0.083 Sum_probs=84.3
Q ss_pred cceEEEEEcCCCCceeeeeccCccceeee------e-EEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCe
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAALA------S-LSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSL 108 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~-lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~ 108 (161)
|++|++||+.+++.+++++.... ..+++ + +++++.++ |++||+.+++.+. .+..+.. ...++|++++
T Consensus 11 ~~~v~v~D~~t~~~~~~i~~g~~-p~~va~spdG~~l~v~~~~~~~i~v~d~~t~~~~~-~~~~~~~---~~~~~~~~~~ 85 (301)
T d1l0qa2 11 SDNISVIDVTSNKVTATIPVGSN-PMGAVISPDGTKVYVANAHSNDVSIIDTATNNVIA-TVPAGSS---PQGVAVSPDG 85 (301)
T ss_dssp TTEEEEEETTTTEEEEEEECSSS-EEEEEECTTSSEEEEEEGGGTEEEEEETTTTEEEE-EEECSSS---EEEEEECTTS
T ss_pred CCEEEEEECCCCeEEEEEECCCC-ceEEEEeCCCCEEEEEECCCCEEEEEECCCCceee-eeecccc---cccccccccc
Confidence 89999999999999999986544 45666 4 46777788 9999999987653 4444442 4567888766
Q ss_pred E-EEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 109 V-AVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 109 ~-~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
. .++++..++.+.+||..+++.+..+.....+..+.|+|+
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d 126 (301)
T d1l0qa2 86 KQVYVTNMASSTLSVIDTTSNTVAGTVKTGKSPLGLALSPD 126 (301)
T ss_dssp SEEEEEETTTTEEEEEETTTTEEEEEEECSSSEEEEEECTT
T ss_pred ccccccccccceeeecccccceeeeeccccccceEEEeecC
Confidence 4 445566788999999999999988888888899999987
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=99.08 E-value=4.5e-10 Score=84.48 Aligned_cols=112 Identities=6% Similarity=-0.021 Sum_probs=76.9
Q ss_pred cceEEEEEcCCCCceeeee--ccCccceeee-------eEEEecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecC
Q psy505 37 IGEVQIFDADNLHAKTMIP--AHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSS 106 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~--~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~ 106 (161)
|++|++||+.+...+..++ .|.+.+.+++ +++++..|+ |++|++.......+.............++|+|
T Consensus 13 ~~~I~v~~~~~~~~l~~~~~~~~~~~v~~la~spDG~~L~v~~~~d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~sp 92 (333)
T d1ri6a_ 13 SQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPDKRYLYVGVRPEFRVLAYRIAPDDGALTFAAESALPGSLTHISTDH 92 (333)
T ss_dssp GTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECT
T ss_pred CCcEEEEEEcCCCCeEEEEEEcCCCCEeEEEEeCCCCEEEEEECCCCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcC
Confidence 8999999998765555444 6889999988 446677788 99999987543322221111111244688999
Q ss_pred CeEEEEe-cCCCCeEEEEecCCCCeEEEEE---ecCceEEEEECCc
Q psy505 107 SLVAVVS-LSSPRKLTVCHFKRGSEICNYS---FSNTILAVKLNRK 148 (161)
Q Consensus 107 ~~~~~~s-~~~d~~i~iWD~~~~~~i~~l~---~~~~V~~v~~~~~ 148 (161)
++..++. +..+++|.+|+........... +...+.++.|+|+
T Consensus 93 Dg~~l~v~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~v~~s~d 138 (333)
T d1ri6a_ 93 QGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPD 138 (333)
T ss_dssp TSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTT
T ss_pred CCCEEeecccCCCceeeeccccccceecccccCCCccceEEEeeec
Confidence 8765444 4567799999988776554443 3567889999998
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=99.03 E-value=2.7e-08 Score=76.12 Aligned_cols=34 Identities=12% Similarity=0.189 Sum_probs=30.2
Q ss_pred CCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 115 SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 115 ~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
..++.+.+||..+++.+..+.+...+.+++|+||
T Consensus 295 ~~~~~v~~~d~~t~~~~~~~~~~~~~~~~a~spD 328 (373)
T d2madh_ 295 AAAKEVTSVTGLVGQTSSQISLGHDVDAISVAQD 328 (373)
T ss_pred cCCCeEEEEECCCCcEEEEecCCCCeeEEEECCC
Confidence 3456899999999999999888889999999998
|
| >d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Quinohemoprotein amine dehydrogenase B chain domain: Quinohemoprotein amine dehydrogenase B chain species: Pseudomonas putida [TaxId: 303]
Probab=99.01 E-value=8.1e-10 Score=82.95 Aligned_cols=97 Identities=8% Similarity=-0.051 Sum_probs=74.4
Q ss_pred cceEEEEEcCCCCcee-eeeccCccceeee------eEEEecCCceEEEEeCCcCceeeEEeecCcceEEEEEeecCCeE
Q psy505 37 IGEVQIFDADNLHAKT-MIPAHDSPLAALA------SLSVGTKSGYRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV 109 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~-~l~~H~~~V~~l~------~lasgs~dgiriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~ 109 (161)
++.+.+||+.++.... .+..|...+.++. +++.++.+.+++||..+++.+.....++ .+.+++|+||+.
T Consensus 229 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~d~~~~~~~~~~~~~~----~~~~va~s~DG~ 304 (346)
T d1jmxb_ 229 LYGYLSVDLKTGKTHTQEFADLTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDH----TYYCVAFDKKGD 304 (346)
T ss_dssp EEEEEEEETTTCCEEEEEEEECSSCEEEEEECSSCTTEEEEEESEEEEEETTTTEEEEEEECSS----CCCEEEECSSSS
T ss_pred CceEEEEECCCCceEEEEeecccceeEEEEEeCCCCEEEEecCCeEEEEECCCCcEEEEEcCCC----CEEEEEEcCCCC
Confidence 5678999999887554 4556777776665 6666666669999999987654333333 256889999998
Q ss_pred EEEecCCCCeEEEEecCCCCeEEEEEec
Q psy505 110 AVVSLSSPRKLTVCHFKRGSEICNYSFS 137 (161)
Q Consensus 110 ~~~s~~~d~~i~iWD~~~~~~i~~l~~~ 137 (161)
.++.++.|+.|+|||+++++.+.++..+
T Consensus 305 ~l~v~~~d~~v~v~D~~t~~~i~~i~~p 332 (346)
T d1jmxb_ 305 KLYLGGTFNDLAVFNPDTLEKVKNIKLP 332 (346)
T ss_dssp CEEEESBSSEEEEEETTTTEEEEEEECS
T ss_pred EEEEEeCCCcEEEEECccCCEEEEEECC
Confidence 8888778999999999999999998854
|
| >d2madh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Gram negative methylotrophic bacteria (Thiobacillus versutus) [TaxId: 34007]
Probab=98.93 E-value=2.1e-08 Score=76.73 Aligned_cols=123 Identities=11% Similarity=-0.096 Sum_probs=80.3
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCCCCce--eeeeccCccceee----------e----------------eEEE
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAK--TMIPAHDSPLAAL----------A----------------SLSV 69 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~--~~l~~H~~~V~~l----------~----------------~las 69 (161)
..+.+++++..++. +. ++.+.+|+..+.... ..+..+....... + .+++
T Consensus 217 ~~~~~~~~~~~~~~-~~--~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~ 293 (373)
T d2madh_ 217 QPAQANKSGRIVWP-VY--SGKILQADISAAGATNKAPIDALSGGRKADTWRPGGWQQVAYLKSSDGIYLLTSEQSAWKL 293 (373)
T ss_pred eeEEECCCceEEEe-cC--CceEEEEEcCCCeEEEEEeeccccCcEEeeeeccCcceeeEEecCCCeEEEecCCCceEEe
Confidence 34555667766655 33 789999998876532 2222222211110 0 3445
Q ss_pred ecCCc-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeE--EEEecCCCCeEEEEecCCCCeEEEEE-ecCceEEEEE
Q psy505 70 GTKSG-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV--AVVSLSSPRKLTVCHFKRGSEICNYS-FSNTILAVKL 145 (161)
Q Consensus 70 gs~dg-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~--~~~s~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~ 145 (161)
...++ +.+||+.+++.+..+..++ .+..++|+||+. ++++++.|++|+|||+++++.+.++. +......+++
T Consensus 294 ~~~~~~v~~~d~~t~~~~~~~~~~~----~~~~~a~spDG~~~l~vt~~~d~~v~v~D~~tg~~~~~~~~~g~~P~~l~~ 369 (373)
T d2madh_ 294 HAAAKEVTSVTGLVGQTSSQISLGH----DVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQSTVELGSGPQVLSV 369 (373)
T ss_pred ecCCCeEEEEECCCCcEEEEecCCC----CeeEEEECCCCCEEEEEEeCCCCeEEEEECCCCCEEEEECCCCCCCcEEEE
Confidence 55556 9999999988664432222 356789999874 45677889999999999999999986 5566666665
Q ss_pred CC
Q psy505 146 NR 147 (161)
Q Consensus 146 ~~ 147 (161)
.+
T Consensus 370 ~~ 371 (373)
T d2madh_ 370 MN 371 (373)
T ss_pred ec
Confidence 44
|
| >d1ri6a_ b.69.11.1 (A:) Putative isomerase YbhE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Putative isomerase YbhE family: Putative isomerase YbhE domain: Putative isomerase YbhE species: Escherichia coli [TaxId: 562]
Probab=98.92 E-value=3.1e-09 Score=79.73 Aligned_cols=134 Identities=10% Similarity=0.009 Sum_probs=82.8
Q ss_pred CCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeecc---Cccceeee------eEEEecC-Cc-eEEEEeC
Q psy505 13 NPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAH---DSPLAALA------SLSVGTK-SG-YRLFSLN 81 (161)
Q Consensus 13 ~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H---~~~V~~l~------~lasgs~-dg-iriwd~~ 81 (161)
++..+..++++|||++|.+++.. |+.|++|++........+.+| ...+..++ +|++++. ++ +++|+..
T Consensus 35 ~~~~v~~la~spDG~~L~v~~~~-d~~i~~~~i~~~~~~~~~~~~~~~~~~p~~l~~spDg~~l~v~~~~~~~v~~~~~~ 113 (333)
T d1ri6a_ 35 VPGQVQPMVVSPDKRYLYVGVRP-EFRVLAYRIAPDDGALTFAAESALPGSLTHISTDHQGQFVFVGSYNAGNVSVTRLE 113 (333)
T ss_dssp CSSCCCCEEECTTSSEEEEEETT-TTEEEEEEECTTTCCEEEEEEEECSSCCSEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred CCCCEeEEEEeCCCCEEEEEECC-CCeEEEEEEeCCCCcEEEeeecccCCCceEEEEcCCCCEEeecccCCCceeeeccc
Confidence 34456678889999999666663 899999999877654444333 33455565 6666654 55 9999987
Q ss_pred CcCceeeEEeecCcceEEEEEeecCCeEEEEe-cCCCCeEEEEecCCCCeEEEEE-----e--cCceEEEEECCc
Q psy505 82 SIDTLEQIYENSQEDVCIVERLFSSSLVAVVS-LSSPRKLTVCHFKRGSEICNYS-----F--SNTILAVKLNRK 148 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s-~~~d~~i~iWD~~~~~~i~~l~-----~--~~~V~~v~~~~~ 148 (161)
............. ...+.++.|+|++..+.. ...+..+.+|+........... . ......++|+++
T Consensus 114 ~~~~~~~~~~~~~-~~~~~~v~~s~d~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~g~~p~~i~~~~~ 187 (333)
T d1ri6a_ 114 DGLPVGVVDVVEG-LDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPRHMVFHPN 187 (333)
T ss_dssp TTEEEEEEEEECC-CTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEEEEEECTT
T ss_pred cccceecccccCC-CccceEEEeeecceeeeccccccceeeEEEeccCCcceeeeceeeeeecCCCccEEEEecc
Confidence 6543322211111 112445678887654333 3355689999988765443221 1 245678899887
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.90 E-value=1.8e-08 Score=76.31 Aligned_cols=114 Identities=11% Similarity=0.063 Sum_probs=77.0
Q ss_pred ecCCCceEEEEcC----CCCcceEEEEEcCCCCceeeeeccCccceeee----eEEE----------ecCCc-eEEEEeC
Q psy505 21 CVNSDNCYLAYPG----SNSIGEVQIFDADNLHAKTMIPAHDSPLAALA----SLSV----------GTKSG-YRLFSLN 81 (161)
Q Consensus 21 ~~~~d~~~la~~g----~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~----~las----------gs~dg-iriwd~~ 81 (161)
+++|||..+..+. .. +++|.+||..+++.+.++..+..+--+++ +|++ ++.|+ |++||++
T Consensus 8 a~spdg~~~~v~~~~~~~~-~~~v~v~D~~tg~~~~~~~~g~~~~~a~SpDg~~l~v~~~~~~~~~~g~~d~~v~v~D~~ 86 (355)
T d2bbkh_ 8 APAPDARRVYVNDPAHFAA-VTQQFVIDGEAGRVIGMIDGGFLPNPVVADDGSFIAHASTVFSRIARGERTDYVEVFDPV 86 (355)
T ss_dssp CCCCCTTEEEEEECGGGCS-SEEEEEEETTTTEEEEEEEECSSCEEEECTTSSCEEEEEEEEEETTEEEEEEEEEEECTT
T ss_pred eeCCCCCEEEEEecccCCC-cCeEEEEECCCCcEEEEEECCCCCceEEcCCCCEEEEEeCCCccccccCCCCEEEEEECC
Confidence 5677888876542 22 56899999999999999988766632333 3433 34577 9999999
Q ss_pred CcCceeeEEeecCcc-----eEEEEEeecCCe--EEEEecCCCCeEEEEecCCCCeEEEEEe
Q psy505 82 SIDTLEQIYENSQED-----VCIVERLFSSSL--VAVVSLSSPRKLTVCHFKRGSEICNYSF 136 (161)
Q Consensus 82 ~~~~~~~~~~~~~~~-----~~v~~~~fs~~~--~~~~s~~~d~~i~iWD~~~~~~i~~l~~ 136 (161)
+++....+ ..+... .....++|+|++ +++++.+.+..+.+||..+++.+..+..
T Consensus 87 t~~~~~~~-~~~~~~~~~~~~~~~~~~~s~dg~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~ 147 (355)
T d2bbkh_ 87 TLLPTADI-ELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEGKAFKRMLDV 147 (355)
T ss_dssp TCCEEEEE-EETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEE-ecCCcceeecCCCCceEEEecCCCeeEEecCCCCceeeeeecCCCcEeeEEec
Confidence 98866433 322110 011245788865 4455556678899999999998887754
|
| >d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.79 E-value=1.6e-08 Score=76.56 Aligned_cols=107 Identities=15% Similarity=0.114 Sum_probs=68.7
Q ss_pred CCCceEEEEcCCCCcceEEEEEcCCCCc--eeeeeccCccce----------eee--------eEEEec--------CCc
Q psy505 23 NSDNCYLAYPGSNSIGEVQIFDADNLHA--KTMIPAHDSPLA----------ALA--------SLSVGT--------KSG 74 (161)
Q Consensus 23 ~~d~~~la~~g~~~dg~v~iWd~~~~~~--~~~l~~H~~~V~----------~l~--------~lasgs--------~dg 74 (161)
.+++..++.++. +|.+.+||+.+++. +....+|..... .++ ++++.. ...
T Consensus 203 ~~~~~~~~~~~~--~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 280 (355)
T d2bbkh_ 203 SQKAGRLVWPTY--TGKIHQIDLSSGDAKFLPAVEALTEAERADGWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASR 280 (355)
T ss_dssp ETTTTEEEEEBT--TSEEEEEECTTSSCEECCCEESSCHHHHHTTEEECSSSCEEEETTTTEEEEEEEECCTTCTTSCEE
T ss_pred cCCCCeEEEecC--CCeEEEEecCCCcEEEEeccCCcccceEeeeeeccceEEEEEeCCCCeEEEEeccCCceeecCCCC
Confidence 444555665554 89999999998754 222333332211 121 111111 113
Q ss_pred -eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeE--EEEecCCCCeEEEEecCCCCeEEEEE
Q psy505 75 -YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLV--AVVSLSSPRKLTVCHFKRGSEICNYS 135 (161)
Q Consensus 75 -iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~--~~~s~~~d~~i~iWD~~~~~~i~~l~ 135 (161)
+++||..+++.+..+..++ .+.+++|+|++. ++++++.|++|+|||.++++.+.++.
T Consensus 281 ~v~v~d~~t~~~~~~~~~~~----~~~~~a~spDG~~~l~v~~~~d~~i~v~D~~tg~~~~~i~ 340 (355)
T d2bbkh_ 281 FVVVLDAKTGERLAKFEMGH----EIDSINVSQDEKPLLYALSTGDKTLYIHDAESGEELRSVN 340 (355)
T ss_dssp EEEEEETTTCCEEEEEEEEE----EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEEC
T ss_pred eEEEEeCCCCcEEEEecCCC----CEEEEEEcCCCCeEEEEEECCCCEEEEEECCCCCEEEEEe
Confidence 8999999987664443222 356889999863 66777788999999999999999886
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.51 E-value=3.1e-07 Score=73.01 Aligned_cols=107 Identities=12% Similarity=0.082 Sum_probs=76.2
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCceeee-----eccCccceeee------eEEEecC---------Cc-eEE
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMI-----PAHDSPLAALA------SLSVGTK---------SG-YRL 77 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l-----~~H~~~V~~l~------~lasgs~---------dg-iri 77 (161)
.+.+.+|+.++.. . ||.+.+||+.+++....+ ..|...|.+++ +||.+++ ++ +.|
T Consensus 21 ~~~W~~d~~~~~~-~---~~~~~~~~~~t~~~~~~~~~~~~~~~~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~~~~~~l 96 (470)
T d2bgra1 21 SLRWISDHEYLYK-Q---ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSYTASYDI 96 (470)
T ss_dssp CCEECSSSEEEEE-S---SSCEEEEETTTCCEEEEECTTTTTTSSSCCCEEEECTTSSEEEEEEEEEECSSSCEEEEEEE
T ss_pred CCEeCCCCEEEEE-c---CCcEEEEECCCCCEEEEEchhhhhhccCccceeEECCCCCEEEEEECCcceeeeccCceEEE
Confidence 3445678876653 2 788999999999876544 45567888876 6676643 56 889
Q ss_pred EEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE
Q psy505 78 FSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY 134 (161)
Q Consensus 78 wd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l 134 (161)
||+++++.. .+..+... +....||||+..++.. .++.+.+|+..+++.+...
T Consensus 97 ~d~~~~~~~--~l~~~~~~--~~~~~~SPDG~~ia~~-~~~~l~~~~~~~g~~~~~t 148 (470)
T d2bgra1 97 YDLNKRQLI--TEERIPNN--TQWVTWSPVGHKLAYV-WNNDIYVKIEPNLPSYRIT 148 (470)
T ss_dssp EETTTTEEC--CSSCCCTT--EEEEEECSSTTCEEEE-ETTEEEEESSTTSCCEECC
T ss_pred EECCCCccc--ccccCCcc--ccccccccCcceeeEe-ecccceEEECCCCceeeee
Confidence 999987532 33444433 5677899988777765 4578999999999876543
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.49 E-value=6.7e-07 Score=68.78 Aligned_cols=62 Identities=5% Similarity=-0.055 Sum_probs=45.2
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee---eEEEecCCc-eEEEEeC
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA---SLSVGTKSG-YRLFSLN 81 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~---~lasgs~dg-iriwd~~ 81 (161)
.++++|||++++++... ++.+.+||+.+++.+..+..+......-. .++..+.|| +..|+..
T Consensus 128 ~~a~SpDGk~l~va~~~-~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~Dg~~~~~~~~ 193 (368)
T d1mdah_ 128 IIGNCASSACLLFFLFG-SSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYLGSCPASLAASDLA 193 (368)
T ss_dssp SEEECTTSSCEEEEECS-SSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEECCCCTTSCEEEECC
T ss_pred ceEECCCCCEEEEEeCC-CCeEEEEECCCCcEeEEeeccCcceEccCCCceEEEEcCCCCEEEEEec
Confidence 35678899998876653 89999999999999888877655432222 555667777 7777654
|
| >d1mdah_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain {Paracoccus denitrificans [TaxId: 266]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: YVTN repeat-like/Quinoprotein amine dehydrogenase family: Methylamine dehydrogenase, H-chain domain: Methylamine dehydrogenase, H-chain species: Paracoccus denitrificans [TaxId: 266]
Probab=98.49 E-value=3.9e-07 Score=70.11 Aligned_cols=129 Identities=10% Similarity=-0.054 Sum_probs=82.4
Q ss_pred EEeecCCCce--EEEEcCCCCcce--EEEEEcCCCCceeeeeccCccceeee----eEEE----------ecCCc-eEEE
Q psy505 18 CCLCVNSDNC--YLAYPGSNSIGE--VQIFDADNLHAKTMIPAHDSPLAALA----SLSV----------GTKSG-YRLF 78 (161)
Q Consensus 18 ~~~~~~~d~~--~la~~g~~~dg~--v~iWd~~~~~~~~~l~~H~~~V~~l~----~las----------gs~dg-iriw 78 (161)
...++.+|+. +++.+... +|+ +.+||..+++.+.++.+|..+.-.++ .++. |+.|+ |++|
T Consensus 23 ~~~a~~~~~~~~~v~~~~~~-~g~~~~~~~d~~~~~~~~~~~~~~~~~~a~spDg~~i~~~~~~~~~~~~g~~d~~v~v~ 101 (368)
T d1mdah_ 23 CDHGPGAISRRSHITLPAYF-AGTTENWVSCAGCGVTLGHSLGAFLSLAVAGHSGSDFALASTSFARSAKGKRTDYVEVF 101 (368)
T ss_dssp BCCCCCCCTTEEEEEECTTT-CSSEEEEEEETTTTEEEEEEEECTTCEEEECTTSSCEEEEEEEETTTTSSSEEEEEEEE
T ss_pred cccccCCCCcceeEEeeccC-CCcceEEEEeCCCCcEEEEEeCCCCCcceECCCCCEEEEEcccCccccccccCCeEEEE
Confidence 3445555554 56655543 565 66669999999999988877654444 3433 34466 9999
Q ss_pred EeCCcCceeeEEeecCcc-----eEEEEEeecCCeEEEE-ecCCCCeEEEEecCCCCeEEEEEecC--------ceEEEE
Q psy505 79 SLNSIDTLEQIYENSQED-----VCIVERLFSSSLVAVV-SLSSPRKLTVCHFKRGSEICNYSFSN--------TILAVK 144 (161)
Q Consensus 79 d~~~~~~~~~~~~~~~~~-----~~v~~~~fs~~~~~~~-s~~~d~~i~iWD~~~~~~i~~l~~~~--------~V~~v~ 144 (161)
|..++++...+ ..+... ..-..++||||+..++ +...++++.+||+++++.+..+..+. ....+.
T Consensus 102 D~~t~~~~~~i-~~p~~~~~~~g~~p~~~a~SpDGk~l~va~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~ 180 (368)
T d1mdah_ 102 DPVTFLPIADI-ELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASDDQLTKSASCFHIHPGAAATHYL 180 (368)
T ss_dssp CTTTCCEEEEE-EETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEEEEEEECSSCCCCEEEETTEEEC
T ss_pred ECCCCcEeeee-cCCccceecccCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcEeEEeeccCcceEccCCCceEEE
Confidence 99998766433 222110 0112467999886553 33467899999999999988875432 234456
Q ss_pred ECCc
Q psy505 145 LNRK 148 (161)
Q Consensus 145 ~~~~ 148 (161)
+++|
T Consensus 181 ~~~D 184 (368)
T d1mdah_ 181 GSCP 184 (368)
T ss_dssp CCCT
T ss_pred EcCC
Confidence 6665
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=98.15 E-value=0.00027 Score=52.81 Aligned_cols=146 Identities=12% Similarity=0.052 Sum_probs=92.2
Q ss_pred cceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-
Q psy505 2 KVLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG- 74 (161)
Q Consensus 2 ~~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg- 74 (161)
|.++++ +++.-+..++++|||.++++... +++|.-||... + ...+......+.+++ ++++...++
T Consensus 19 ~v~~~~----p~~~~~e~iAv~pdG~l~vt~~~--~~~I~~i~p~g-~-~~~~~~~~~~~~gla~~~dG~l~v~~~~~~~ 90 (302)
T d2p4oa1 19 KIITSF----PVNTFLENLASAPDGTIFVTNHE--VGEIVSITPDG-N-QQIHATVEGKVSGLAFTSNGDLVATGWNADS 90 (302)
T ss_dssp EEEEEE----CTTCCEEEEEECTTSCEEEEETT--TTEEEEECTTC-C-EEEEEECSSEEEEEEECTTSCEEEEEECTTS
T ss_pred cEEEEC----CCCCCcCCEEECCCCCEEEEeCC--CCEEEEEeCCC-C-EEEEEcCCCCcceEEEcCCCCeEEEecCCce
Confidence 445555 34444667888999998887554 78898888664 3 344555667788887 566665555
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe-----------cCceEEE
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF-----------SNTILAV 143 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~-----------~~~V~~v 143 (161)
+..|+..........+...........+++.+++...++.+.++.+..+|...+....-+.. ...+..+
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ngi 170 (302)
T d2p4oa1 91 IPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQPSGSIWLEHPMLARSNSESVFPAANGL 170 (302)
T ss_dssp CEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTTEEEEEEECGGGSCSSTTCCSCSEEEE
T ss_pred EEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCCcceeEecCCccceeeccCcccccccc
Confidence 77777654332212222222122356788999999888877778888889887753322211 1245667
Q ss_pred EECCcEEEEEec
Q psy505 144 KLNRKKEEEEDE 155 (161)
Q Consensus 144 ~~~~~~~vv~~~ 155 (161)
.+..+.+.++..
T Consensus 171 ~~~~~~l~~~~~ 182 (302)
T d2p4oa1 171 KRFGNFLYVSNT 182 (302)
T ss_dssp EEETTEEEEEET
T ss_pred cccCCceeeecC
Confidence 777777666543
|
| >d2bgra1 b.70.3.1 (A:39-508) Dipeptidyl peptidase IV/CD26, N-terminal domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl peptidase IV/CD26, N-terminal domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=98.13 E-value=2e-06 Score=68.19 Aligned_cols=71 Identities=8% Similarity=0.026 Sum_probs=56.6
Q ss_pred CceeEEeecCCCceEEEEcC--------CCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCceEEEE
Q psy505 14 PNGICCLCVNSDNCYLAYPG--------SNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSGYRLFS 79 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g--------~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dgiriwd 79 (161)
..++.+++++|||++|+++. +. +|.+.|||+.+++ +..+..|.+.+..++ .+|...+..+.+|+
T Consensus 61 ~~~i~~~~~SpDg~~i~~~~~~~~~~r~s~-~~~~~l~d~~~~~-~~~l~~~~~~~~~~~~SPDG~~ia~~~~~~l~~~~ 138 (470)
T d2bgra1 61 GHSINDYSISPDGQFILLEYNYVKQWRHSY-TASYDIYDLNKRQ-LITEERIPNNTQWVTWSPVGHKLAYVWNNDIYVKI 138 (470)
T ss_dssp SSCCCEEEECTTSSEEEEEEEEEECSSSCE-EEEEEEEETTTTE-ECCSSCCCTTEEEEEECSSTTCEEEEETTEEEEES
T ss_pred cCccceeEECCCCCEEEEEECCcceeeecc-CceEEEEECCCCc-ccccccCCccccccccccCcceeeEeecccceEEE
Confidence 34688999999999999863 21 6889999999876 466888888888777 78877666699999
Q ss_pred eCCcCce
Q psy505 80 LNSIDTL 86 (161)
Q Consensus 80 ~~~~~~~ 86 (161)
..+++..
T Consensus 139 ~~~g~~~ 145 (470)
T d2bgra1 139 EPNLPSY 145 (470)
T ss_dssp STTSCCE
T ss_pred CCCCcee
Confidence 9888654
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.84 E-value=1.4e-05 Score=64.31 Aligned_cols=122 Identities=10% Similarity=0.026 Sum_probs=78.5
Q ss_pred cceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCce-------eeEEeecC-cceEEE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDTL-------EQIYENSQ-EDVCIV 100 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~~-------~~~~~~~~-~~~~v~ 100 (161)
++.+.|++....+.+.++..+++| .++. +++++..++ +.+||+++-+.. .....++. ......
T Consensus 237 ~~v~vvd~~~~~~v~~~IPvgksP-hGv~vSPDGkyl~~~~~~~~tvsv~d~~k~~~~~~~~~~~~~~~~~~~~~glgpl 315 (441)
T d1qnia2 237 SKVPVVDGRGESEFTRYIPVPKNP-HGLNTSPDGKYFIANGKLSPTVSVIAIDKLDDLFEDKIELRDTIVAEPELGLGPL 315 (441)
T ss_dssp CCCCEEECSSSCSSEEEECCBSSC-CCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHTTTSSCGGGGEEECCBCCSCEE
T ss_pred CCcEEEEcccCCceEEEEeCCCCc-cCceECCCCCEEEEeCCcCCcEEEEEeehhhhHhhccCCcceEEEeecccccCcc
Confidence 456777777777778888877765 4444 567888888 999998642210 01111111 011122
Q ss_pred EEeecCCeEEEEecCCCCeEEEEecCC----------CCeEEEE------EecCceEEEEECCcEEEEEecccee
Q psy505 101 ERLFSSSLVAVVSLSSPRKLTVCHFKR----------GSEICNY------SFSNTILAVKLNRKKEEEEDEEEEK 159 (161)
Q Consensus 101 ~~~fs~~~~~~~s~~~d~~i~iWD~~~----------~~~i~~l------~~~~~V~~v~~~~~~~vv~~~~~~~ 159 (161)
--.|++++.+..|.+.|++|..|++.. ...+..+ .|...+.+..|+||+-.++-.+|.-
T Consensus 316 h~~fd~~g~~yts~~~ds~v~kw~~~~~~~~~~~~~~~~v~~~~~v~y~~GH~~~~~~~t~~pdGk~l~s~~k~s 390 (441)
T d1qnia2 316 HTTFDGRGNAYTTLFIDSQVCKWNIADAIKHYNGDRVNYIRQKLDVQYQPGHNHASLTESRDADGKWLVVLSKFS 390 (441)
T ss_dssp EEEECSSSEEEEEETTTTEEEEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCCCEEEEEESCC
T ss_pred cceecCCceEEEcccccceEEEeccchhhhhhccCCCceeEeccccccCCCCCccccccccCCCCcEEEecCccc
Confidence 346999999999999999999999742 1233333 3556788888999966666665543
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.71 E-value=0.0034 Score=46.02 Aligned_cols=132 Identities=11% Similarity=0.037 Sum_probs=81.6
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee--ccCccceeee------eEEEecCCc-eEEEEeCCcCcee
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP--AHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLE 87 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~--~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~ 87 (161)
...++++++|.++++... .+.+.++|.. ++.+.++. .+......++ ++++....+ |++||. +|+.+.
T Consensus 116 p~~~avd~~G~i~v~~~~--~~~~~~~~~~-g~~~~~~g~~~~~~~~~~i~~d~~g~i~v~d~~~~~V~~~d~-~G~~~~ 191 (279)
T d1q7fa_ 116 PRGVTVDNKGRIIVVECK--VMRVIIFDQN-GNVLHKFGCSKHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY-EGQYLR 191 (279)
T ss_dssp EEEEEECTTSCEEEEETT--TTEEEEECTT-SCEEEEEECTTTCSSEEEEEECSSSEEEEEEGGGTEEEEEET-TCCEEE
T ss_pred cceeccccCCcEEEEeec--cceeeEeccC-CceeecccccccccccceeeeccceeEEeeeccccceeeeec-CCceee
Confidence 456677788877776554 5677788764 56666653 3444445555 555555556 999987 445442
Q ss_pred eEEeecCcceEEEEEeecCCeEEEEecC-CCCeEEEEecCCCCeEEEEEec---CceEEEEECCcEEEEEe
Q psy505 88 QIYENSQEDVCIVERLFSSSLVAVVSLS-SPRKLTVCHFKRGSEICNYSFS---NTILAVKLNRKKEEEED 154 (161)
Q Consensus 88 ~~~~~~~~~~~v~~~~fs~~~~~~~s~~-~d~~i~iWD~~~~~~i~~l~~~---~~V~~v~~~~~~~vv~~ 154 (161)
.+........-..+++.+++..+++.. .+..|.++| ..|+.+..+.-. ....+|++.|++.++|.
T Consensus 192 -~~g~~g~~~~P~giavD~~G~i~Vad~~~~~~v~~f~-~~G~~~~~~~~~~~~~~p~~vav~~dG~l~V~ 260 (279)
T d1q7fa_ 192 -QIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFT-QDGQLISALESKVKHAQCFDVALMDDGSVVLA 260 (279)
T ss_dssp -EESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEEC-TTSCEEEEEEESSCCSCEEEEEEETTTEEEEE
T ss_pred -eecccccccCCcccccccCCeEEEEECCCCcEEEEEC-CCCCEEEEEeCCCCCCCEeEEEEeCCCcEEEE
Confidence 222111111235678888776666643 345799998 469988877532 36789999999444443
|
| >d1q7fa_ b.68.9.1 (A:) Brain tumor cg10719-pa {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Brain tumor cg10719-pa species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.69 E-value=0.0012 Score=48.59 Aligned_cols=120 Identities=10% Similarity=0.061 Sum_probs=75.9
Q ss_pred ceEEecCCCCCCceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeee--ccCccceeee-------eEEEecCC
Q psy505 3 VLHTIRDTPPNPNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIP--AHDSPLAALA-------SLSVGTKS 73 (161)
Q Consensus 3 ~~~~~~~~~~~~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~--~H~~~V~~l~-------~lasgs~d 73 (161)
++.++ ....+......++++++|..+++... .+.|+++|.. |+.+.++. ++.....+++ ++|-...+
T Consensus 146 ~~~~~-g~~~~~~~~~~i~~d~~g~i~v~d~~--~~~V~~~d~~-G~~~~~~g~~g~~~~P~giavD~~G~i~Vad~~~~ 221 (279)
T d1q7fa_ 146 VLHKF-GCSKHLEFPNGVVVNDKQEIFISDNR--AHCVKVFNYE-GQYLRQIGGEGITNYPIGVGINSNGEILIADNHNN 221 (279)
T ss_dssp EEEEE-ECTTTCSSEEEEEECSSSEEEEEEGG--GTEEEEEETT-CCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSS
T ss_pred eeecc-cccccccccceeeeccceeEEeeecc--ccceeeeecC-CceeeeecccccccCCcccccccCCeEEEEECCCC
Confidence 34555 34444555667788888877776544 7899999975 66666663 3444456666 44433345
Q ss_pred c-eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCC
Q psy505 74 G-YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGS 129 (161)
Q Consensus 74 g-iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~ 129 (161)
+ |.+|+. +|+.+ ..+...........+++.|++..+++. .+++|++|...+..
T Consensus 222 ~~v~~f~~-~G~~~-~~~~~~~~~~~p~~vav~~dG~l~V~~-~n~~v~~fr~~~~~ 275 (279)
T d1q7fa_ 222 FNLTIFTQ-DGQLI-SALESKVKHAQCFDVALMDDGSVVLAS-KDYRLYIYRYVQLA 275 (279)
T ss_dssp CEEEEECT-TSCEE-EEEEESSCCSCEEEEEEETTTEEEEEE-TTTEEEEEECSCCC
T ss_pred cEEEEECC-CCCEE-EEEeCCCCCCCEeEEEEeCCCcEEEEe-CCCeEEEEEeeeec
Confidence 5 999984 56644 333322211134567889998877765 57889999887654
|
| >d1qnia2 b.69.3.1 (A:10-450) Nitrous oxide reductase, N-terminal domain {Pseudomonas nautica [TaxId: 2743]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Nitrous oxide reductase, N-terminal domain family: Nitrous oxide reductase, N-terminal domain domain: Nitrous oxide reductase, N-terminal domain species: Pseudomonas nautica [TaxId: 2743]
Probab=97.66 E-value=0.0012 Score=52.64 Aligned_cols=120 Identities=13% Similarity=0.101 Sum_probs=78.1
Q ss_pred CceEEEEcCCCCcceEEEEEcCCCCceeeeec------------------------------cCccceeee-------eE
Q psy505 25 DNCYLAYPGSNSIGEVQIFDADNLHAKTMIPA------------------------------HDSPLAALA-------SL 67 (161)
Q Consensus 25 d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~------------------------------H~~~V~~l~-------~l 67 (161)
|+-+...+|.. +|+|++||+.+++.++++.. |.-...... ++
T Consensus 9 De~y~f~Sgg~-sG~V~V~dlpS~r~l~~IpVfspd~~~g~g~~~es~~vl~~~~~~~~gd~hhP~~s~t~gtpDGr~lf 87 (441)
T d1qnia2 9 DEYYGFWSGGH-QGEVRVLGVPSMRELMRIPVFNVDSATGWGITNESKEILGGDQQYLNGDCHHPHISMTDGRYDGKYLF 87 (441)
T ss_dssp CSEEEEEECBT-TCCEEEEEETTTEEEEEECSSSBCTTTCTTTSHHHHHHHCSSSCCSCCCBCCCEEEEETTEEEEEEEE
T ss_pred CCEEEEEeCCC-CCcEEEEeCCCCcEEEEEEeEcCCCCEEEEECCccceEEecccccccCcccCCCcceecccCCCCEEE
Confidence 56676666764 99999999999988777632 111122221 44
Q ss_pred EEecCCc-eEEEEeCCcCceeeEEe-ecCcceEEEEEeecCCeE--EEEecCCCC-----------------eEEEEecC
Q psy505 68 SVGTKSG-YRLFSLNSIDTLEQIYE-NSQEDVCIVERLFSSSLV--AVVSLSSPR-----------------KLTVCHFK 126 (161)
Q Consensus 68 asgs~dg-iriwd~~~~~~~~~~~~-~~~~~~~v~~~~fs~~~~--~~~s~~~d~-----------------~i~iWD~~ 126 (161)
++...+. |.++|+++++.. +..+ .+. .....++|+|++. +++..+++. .+..+|.+
T Consensus 88 V~d~~~~rVavIDl~t~k~~-~ii~iP~g--~gphgi~~spdg~t~YV~~~~~~~v~~~~dg~~~~~~~~~~~~~~iD~~ 164 (441)
T d1qnia2 88 INDKANTRVARIRLDIMKTD-KITHIPNV--QAIHGLRLQKVPKTNYVFCNAEFVIPQPNDGTDFSLDNSYTMFTAIDAE 164 (441)
T ss_dssp EEETTTTEEEEEETTTTEEE-EEEECTTC--CCEEEEEECCSSBCCEEEEEECSCEESSCSSSCCCGGGEEEEEEEEETT
T ss_pred EEcCCCCEEEEEECCCCcEe-eEEecCCC--CCccceEEeccCCEEEEEeccCCcccccCcccccccccccceEEeecCc
Confidence 5555555 999999987644 3333 122 1355778887554 444332221 24568999
Q ss_pred CCCeEEEEEecCceEEEEECCc
Q psy505 127 RGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 127 ~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
+.+...++........+.|+|+
T Consensus 165 t~~v~~qI~v~~~p~~v~~spd 186 (441)
T d1qnia2 165 TMDVAWQVIVDGNLDNTDADYT 186 (441)
T ss_dssp TCSEEEEEEESSCCCCEEECSS
T ss_pred cceeeEEEecCCCccceEECCC
Confidence 9998888777777889999998
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.80 E-value=0.029 Score=40.25 Aligned_cols=138 Identities=12% Similarity=0.014 Sum_probs=78.7
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
...++++++|.+.+.-.. ...+..++..+.........-....++++ ++++...++ |..+|.+... . ..
T Consensus 100 p~~iavd~~g~i~v~d~~--~~~~~~~~~~~~~~~~~~~~~~~~p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~-~-~~ 175 (260)
T d1rwia_ 100 PEGLAVDTQGAVYVADRG--NNRVVKLAAGSKTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESNN-Q-VV 175 (260)
T ss_dssp EEEEEECTTCCEEEEEGG--GTEEEEECTTCSSCEECCCCSCCSCCEEEECTTCCEEEEEGGGTEEEEECTTTCC-E-EE
T ss_pred cccccccccceeEeeccc--cccccccccccceeeeeeecccCCcceeeecCCCCEeeeccccccccccccccce-e-ee
Confidence 456777888877765332 45566667654432221111123345555 455555555 8888876533 2 12
Q ss_pred Ee-ecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe--cCceEEEEECCc-EEEEEec--cceeeC
Q psy505 90 YE-NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF--SNTILAVKLNRK-KEEEEDE--EEEKKI 161 (161)
Q Consensus 90 ~~-~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~~-~~vv~~~--~~~~~~ 161 (161)
.. .... .-..+++.+++...++....+.|..++...+.. ..+.. -....+++++++ .+.|+.. ++|.||
T Consensus 176 ~~~~~~~--~p~gi~~d~~g~l~vsd~~~~~i~~~~~~~~~~-~~~~~~~~~~P~~i~~d~~g~l~vad~~~~rI~~i 250 (260)
T d1rwia_ 176 LPFTDIT--APWGIAVDEAGTVYVTEHNTNQVVKLLAGSTTS-TVLPFTGLNTPLAVAVDSDRTVYVADRGNDRVVKL 250 (260)
T ss_dssp CCCSSCC--SEEEEEECTTCCEEEEETTTTEEEEECTTCSCC-EECCCCSCCCEEEEEECTTCCEEEEEGGGTEEEEE
T ss_pred eeccccC--CCccceeeeeeeeeeeecCCCEEEEEeCCCCeE-EEEccCCCCCeEEEEEeCCCCEEEEECCCCEEEEE
Confidence 21 1111 135678888877777777777888888765432 22222 246788999987 5555533 467664
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=96.57 E-value=0.092 Score=39.61 Aligned_cols=137 Identities=7% Similarity=-0.016 Sum_probs=75.4
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCcee---eee--ccCccceeee-------eEEEecCCc-eEEEEeCCc
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKT---MIP--AHDSPLAALA-------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~---~l~--~H~~~V~~l~-------~lasgs~dg-iriwd~~~~ 83 (161)
+-.++++|||+++.++... ...|.+|+......+. .+. ......+.++ ++++.-.++ |.+||...+
T Consensus 147 ~h~v~~sPdG~~l~v~d~g-~d~v~~~~~~~~g~~~~~~~~~~~~~g~gPr~i~f~pdg~~~yv~~e~~~~V~v~~~~~~ 225 (365)
T d1jofa_ 147 IHGMVFDPTETYLYSADLT-ANKLWTHRKLASGEVELVGSVDAPDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPA 225 (365)
T ss_dssp EEEEEECTTSSEEEEEETT-TTEEEEEEECTTSCEEEEEEEECSSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTT
T ss_pred ceEEEECCCCCEEEEeeCC-CCEEEEEEccCCCceeeccceeecCCCCceEEEEECCCCceEEEeccCCCEEEEEEecCC
Confidence 4578889999988887653 5678888765432221 121 1223334444 334555566 999998765
Q ss_pred CceeeEEeec-----------------CcceEEEEEeecCCeEEEEe-cCCCC-----eEEEEecCCCCeEEEEE-e---
Q psy505 84 DTLEQIYENS-----------------QEDVCIVERLFSSSLVAVVS-LSSPR-----KLTVCHFKRGSEICNYS-F--- 136 (161)
Q Consensus 84 ~~~~~~~~~~-----------------~~~~~v~~~~fs~~~~~~~s-~~~d~-----~i~iWD~~~~~~i~~l~-~--- 136 (161)
... ...... ........+.++|++..+.. ...++ .|..|++.....+.... .
T Consensus 226 ~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~lyvsnr~~~~~~~~~i~~~~~~~~g~~~~~~~~~~~ 304 (365)
T d1jofa_ 226 THM-PVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMFASSRANKFELQGYIAGFKLRDCGSIEKQLFLSPT 304 (365)
T ss_dssp TCC-EEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEEEEEEESSTTSCCEEEEEEECTTSCEEEEEEEEEC
T ss_pred Cce-EEEEeeeeccccccccccccccccccCCccceEECCCCCEEEEEcccCCCccceEEEEEEecCCCceeeEeEeeEE
Confidence 432 111100 01123557789998865543 22222 37777766543333221 1
Q ss_pred ---cCceEEEEECC-c--EEEEEec
Q psy505 137 ---SNTILAVKLNR-K--KEEEEDE 155 (161)
Q Consensus 137 ---~~~V~~v~~~~-~--~~vv~~~ 155 (161)
.....+++|+| + .++|+-+
T Consensus 305 ~~~G~~p~~i~~~p~~G~~l~va~~ 329 (365)
T d1jofa_ 305 PTSGGHSNAVSPCPWSDEWMAITDD 329 (365)
T ss_dssp SSCCTTCCCEEECTTCTTEEEEECS
T ss_pred EcCCCCccEEEecCCCCCEEEEEeC
Confidence 13567899987 3 4555543
|
| >d1jofa_ b.69.10.1 (A:) 3-carboxy-cis,cis-mucoante lactonizing enzyme {Neurospora crassa [TaxId: 5141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: 3-carboxy-cis,cis-mucoante lactonizing enzyme family: 3-carboxy-cis,cis-mucoante lactonizing enzyme domain: 3-carboxy-cis,cis-mucoante lactonizing enzyme species: Neurospora crassa [TaxId: 5141]
Probab=96.47 E-value=0.06 Score=40.71 Aligned_cols=36 Identities=8% Similarity=-0.033 Sum_probs=29.0
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA 50 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~ 50 (161)
..|...++++|||.++...... +++|.+||+.+++.
T Consensus 192 g~gPr~i~f~pdg~~~yv~~e~-~~~V~v~~~~~~~~ 227 (365)
T d1jofa_ 192 GDHPRWVAMHPTGNYLYALMEA-GNRICEYVIDPATH 227 (365)
T ss_dssp TCCEEEEEECTTSSEEEEEETT-TTEEEEEEECTTTC
T ss_pred CCceEEEEECCCCceEEEeccC-CCEEEEEEecCCCc
Confidence 3577889999999988666764 89999999987653
|
| >d2p4oa1 b.68.6.3 (A:4-305) Hypothetical protein All0351 homologue {Nostoc punctiforme [TaxId: 272131]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: All0351-like domain: Hypothetical protein All0351 homologue species: Nostoc punctiforme [TaxId: 272131]
Probab=96.25 E-value=0.067 Score=39.07 Aligned_cols=142 Identities=8% Similarity=-0.013 Sum_probs=81.4
Q ss_pred CceeEEeecCCCceEEEEcCCCCcceEEEEEcCCCCc-eeeee--ccCccceeee------eEEEecCCc-eEEEEeCCc
Q psy505 14 PNGICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHA-KTMIP--AHDSPLAALA------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 14 ~~~v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~-~~~l~--~H~~~V~~l~------~lasgs~dg-iriwd~~~~ 83 (161)
+.++.+++++|||.++++... ++.+..|+...... ...+. ......++++ ++++-+.++ +..+|..++
T Consensus 67 ~~~~~gla~~~dG~l~v~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~i~~~~~g~~~v~~~~~~~i~~~~~~~~ 144 (302)
T d2p4oa1 67 EGKVSGLAFTSNGDLVATGWN--ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQYLTADSYRGAIWLIDVVQP 144 (302)
T ss_dssp SSEEEEEEECTTSCEEEEEEC--TTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEEEEEETTTTEEEEEETTTT
T ss_pred CCCcceEEEcCCCCeEEEecC--CceEEEEEecccccceeeccccCCccccceeEEccCCCEEeeccccccceeeeccCC
Confidence 446778889999998887544 67788887765432 22221 2334456665 566666666 777777665
Q ss_pred CceeeEEee---------cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEE---EEecCceEEEEECCc-EE
Q psy505 84 DTLEQIYEN---------SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICN---YSFSNTILAVKLNRK-KE 150 (161)
Q Consensus 84 ~~~~~~~~~---------~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~---l~~~~~V~~v~~~~~-~~ 150 (161)
.. ..... +........+.++.+.++.+.. ..+.|..+|......... +.......+++|.++ .+
T Consensus 145 ~~--~~~~~~~~~~~~~~~~~~~~~ngi~~~~~~l~~~~~-~~~~i~~~~~~~~~~~~~~~~~~~~~~pdgia~d~dG~l 221 (302)
T d2p4oa1 145 SG--SIWLEHPMLARSNSESVFPAANGLKRFGNFLYVSNT-EKMLLLRIPVDSTDKPGEPEIFVEQTNIDDFAFDVEGNL 221 (302)
T ss_dssp EE--EEEEECGGGSCSSTTCCSCSEEEEEEETTEEEEEET-TTTEEEEEEBCTTSCBCCCEEEEESCCCSSEEEBTTCCE
T ss_pred cc--eeEecCCccceeeccCcccccccccccCCceeeecC-CCCeEEeccccccccccccccccCCCCCcceEECCCCCE
Confidence 32 12111 1112234556777777665544 567788888765433222 222345667888887 44
Q ss_pred EEEe--ccceee
Q psy505 151 EEED--EEEEKK 160 (161)
Q Consensus 151 vv~~--~~~~~~ 160 (161)
.++. .++|.+
T Consensus 222 ~va~~~~~~V~~ 233 (302)
T d2p4oa1 222 YGATHIYNSVVR 233 (302)
T ss_dssp EEECBTTCCEEE
T ss_pred EEEEcCCCcEEE
Confidence 4443 445554
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=96.05 E-value=0.1 Score=36.48 Aligned_cols=47 Identities=6% Similarity=-0.044 Sum_probs=32.6
Q ss_pred EEEeecCCeEEEE--e-cCCCCeEEEEecCCCCeEEEEE-ecCceEEEEECC
Q psy505 100 VERLFSSSLVAVV--S-LSSPRKLTVCHFKRGSEICNYS-FSNTILAVKLNR 147 (161)
Q Consensus 100 ~~~~fs~~~~~~~--s-~~~d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~ 147 (161)
....||||+..++ + ......|.+||+..+.. ..+. ....+...+|||
T Consensus 217 ~~p~~SPDG~~i~f~s~~~~~~~l~~~~~dg~~~-~~lt~~~g~~~~p~WSP 267 (269)
T d2hqsa1 217 ETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGRFK-ARLPATDGQVKFPAWSP 267 (269)
T ss_dssp EEEEECTTSSEEEEEEEETTEEEEEEEETTSCCE-EECCCSSSEEEEEEECC
T ss_pred cceEECCCCCEEEEEEcCCCCcEEEEEECCCCCE-EEEeCCCCcEEeEEeCC
Confidence 4567999886554 2 23345799999987765 4444 456788889998
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=95.64 E-value=0.26 Score=36.27 Aligned_cols=61 Identities=8% Similarity=-0.049 Sum_probs=43.7
Q ss_pred EEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec-CceEEEEECCcE--EEEEec--cceee
Q psy505 100 VERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS-NTILAVKLNRKK--EEEEDE--EEEKK 160 (161)
Q Consensus 100 ~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~-~~V~~v~~~~~~--~vv~~~--~~~~~ 160 (161)
..|++.+++...++....+.|.+||.+.++.+..+.-+ ..+.+++|.|++ |.|... ++|++
T Consensus 229 dGiavD~~GnlyVa~~~~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~ 294 (314)
T d1pjxa_ 229 DGMDFDEDNNLLVANWGSSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWK 294 (314)
T ss_dssp EEEEEBTTCCEEEEEETTTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEE
T ss_pred eeeEEecCCcEEEEEcCCCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEE
Confidence 46778877766565545678999999988877777754 678899999973 655443 35554
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=95.46 E-value=0.3 Score=35.85 Aligned_cols=140 Identities=11% Similarity=0.038 Sum_probs=77.2
Q ss_pred eEEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecC--Cc-eEEE--EeCCcCc
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTK--SG-YRLF--SLNSIDT 85 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~--dg-iriw--d~~~~~~ 85 (161)
+..++++++|.+.++--. .|.|.-||..+++....+........+++ ++++... +. .+++ +..++.
T Consensus 42 lEG~~~D~~G~Ly~~D~~--~g~I~ri~p~g~~~~~~~~~~~~~p~gla~~~dG~l~va~~~~~~~~~~i~~~~~~~~~- 118 (319)
T d2dg1a1 42 LEGLNFDRQGQLFLLDVF--EGNIFKINPETKEIKRPFVSHKANPAAIKIHKDGRLFVCYLGDFKSTGGIFAATENGDN- 118 (319)
T ss_dssp EEEEEECTTSCEEEEETT--TCEEEEECTTTCCEEEEEECSSSSEEEEEECTTSCEEEEECTTSSSCCEEEEECTTSCS-
T ss_pred cEeCEECCCCCEEEEECC--CCEEEEEECCCCeEEEEEeCCCCCeeEEEECCCCCEEEEecCCCccceeEEEEcCCCce-
Confidence 457788999976665333 78899999988766655554455556666 3433322 22 3344 443332
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEecCC------CCeEEEEecCCCCeEEEEE-ecCceEEEEECCc--EEEEEe--
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSLSS------PRKLTVCHFKRGSEICNYS-FSNTILAVKLNRK--KEEEED-- 154 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~------d~~i~iWD~~~~~~i~~l~-~~~~V~~v~~~~~--~~vv~~-- 154 (161)
+...............+++.+++...++... .+.+..+|...+ .+..+. .-....+++|+|+ .+.++.
T Consensus 119 ~~~~~~~~~~~~~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg~-~~~~~~~~~~~pnGia~s~dg~~lyvad~~ 197 (319)
T d2dg1a1 119 LQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDFR-TVTPIIQNISVANGIALSTDEKVLWVTETT 197 (319)
T ss_dssp CEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTSC-CEEEEEEEESSEEEEEECTTSSEEEEEEGG
T ss_pred eeeeccCCCcccCCcceeEEeccceeecccccccccCcceeEEEecccc-eeEEEeeccceeeeeeeccccceEEEeccc
Confidence 2223222222233567788888876665321 123555555433 334433 2345678999997 355554
Q ss_pred ccceee
Q psy505 155 EEEEKK 160 (161)
Q Consensus 155 ~~~~~~ 160 (161)
.++|++
T Consensus 198 ~~~I~~ 203 (319)
T d2dg1a1 198 ANRLHR 203 (319)
T ss_dssp GTEEEE
T ss_pred CCceEE
Confidence 345554
|
| >d1rwia_ b.68.9.1 (A:) Serine/threonine-protein kinase PknD {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: NHL repeat family: NHL repeat domain: Serine/threonine-protein kinase PknD species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.33 E-value=0.08 Score=37.79 Aligned_cols=127 Identities=8% Similarity=-0.005 Sum_probs=68.3
Q ss_pred EeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEecCCc-eEEEEeCCcCceeeEEe
Q psy505 19 CLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVGTKSG-YRLFSLNSIDTLEQIYE 91 (161)
Q Consensus 19 ~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasgs~dg-iriwd~~~~~~~~~~~~ 91 (161)
.++++++|.+.++-.. .+.+++++-.++..+..+.+- ...++++ ++++-.... +..++...... ....
T Consensus 61 gvav~~~g~i~v~d~~--~~~i~~~~~~~~~~~~~~~~~-~~p~~iavd~~g~i~v~d~~~~~~~~~~~~~~~~--~~~~ 135 (260)
T d1rwia_ 61 GLAVDGAGTVYVTDFN--NRVVTLAAGSNNQTVLPFDGL-NYPEGLAVDTQGAVYVADRGNNRVVKLAAGSKTQ--TVLP 135 (260)
T ss_dssp CEEECTTCCEEEEETT--TEEEEECTTCSCCEECCCCSC-CSEEEEEECTTCCEEEEEGGGTEEEEECTTCSSC--EECC
T ss_pred EEEEcCCCCEEEeeee--eceeeeeeeccceeeeeeeee-eecccccccccceeEeecccccccccccccccee--eeee
Confidence 3455778877776443 567877776655544433332 3345555 333322233 55555533221 1111
Q ss_pred --ecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEe--cCceEEEEECCc-EEEEEe
Q psy505 92 --NSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSF--SNTILAVKLNRK-KEEEED 154 (161)
Q Consensus 92 --~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~--~~~V~~v~~~~~-~~vv~~ 154 (161)
+... -..+++++++...++...++.|..+|....... .+.. -....++++.++ .|.|+.
T Consensus 136 ~~~~~~---p~~i~~~~~g~~~v~~~~~~~i~~~d~~~~~~~-~~~~~~~~~p~gi~~d~~g~l~vsd 199 (260)
T d1rwia_ 136 FTGLND---PDGVAVDNSGNVYVTDTDNNRVVKLEAESNNQV-VLPFTDITAPWGIAVDEAGTVYVTE 199 (260)
T ss_dssp CCSCCS---CCEEEECTTCCEEEEEGGGTEEEEECTTTCCEE-ECCCSSCCSEEEEEECTTCCEEEEE
T ss_pred ecccCC---cceeeecCCCCEeeeccccccccccccccceee-eeeccccCCCccceeeeeeeeeeee
Confidence 1111 135667777666666556678999998755432 3322 245688999887 455444
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=94.13 E-value=0.073 Score=41.83 Aligned_cols=108 Identities=11% Similarity=0.145 Sum_probs=61.7
Q ss_pred cCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCc---ccee--ee----eEEEe---------cCCc-eEEEEeCC
Q psy505 22 VNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDS---PLAA--LA----SLSVG---------TKSG-YRLFSLNS 82 (161)
Q Consensus 22 ~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~---~V~~--l~----~lasg---------s~dg-iriwd~~~ 82 (161)
..+|+.++ +... ||.|.+||+.+++....+..+.- .+.+ ++ +++.+ |..+ +-|+|+.+
T Consensus 24 W~~~~~~~-~~~~--~g~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~SpD~~~vl~~~~~~~~~r~s~~~~~~i~d~~~ 100 (465)
T d1xfda1 24 WISDTEFI-YREQ--KGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPDREYALFSYNVEPIYQHSYTGYYVLSKIPH 100 (465)
T ss_dssp BSSSSCBC-CCCS--SSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTTSSEEEEEESCCCCSSSCCCSEEEEEESSS
T ss_pred EeCCCcEE-EEeC--CCcEEEEECCCCCEEEEEcCccccccccceeEECCCCCeEEEEEcccceeEeeccccEEEEEccC
Confidence 34566544 3333 89999999999876544543321 2222 33 33333 2345 88999988
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEE
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNY 134 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l 134 (161)
+... .+.........+....|||++..+|-. .++.|.+.+...+..++..
T Consensus 101 ~~~~-~l~~~~~~~~~l~~~~wSPDG~~iafv-~~~nl~~~~~~~~~~~~lt 150 (465)
T d1xfda1 101 GDPQ-SLDPPEVSNAKLQYAGWGPKGQQLIFI-FENNIYYCAHVGKQAIRVV 150 (465)
T ss_dssp CCCE-ECCCTTCCSCCCSBCCBCSSTTCEEEE-ETTEEEEESSSSSCCEEEE
T ss_pred Ccee-eccCccCCccccceeeeccCCceEEEE-ecceEEEEecCCCceEEEe
Confidence 7642 232222112223346789977655443 2467888888877765544
|
| >d2hqsa1 b.68.4.1 (A:163-431) TolB, C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: TolB, C-terminal domain family: TolB, C-terminal domain domain: TolB, C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=92.91 E-value=0.91 Score=31.23 Aligned_cols=129 Identities=13% Similarity=0.068 Sum_probs=63.0
Q ss_pred eEEeecCCCceEEEEcCCCCcc--eEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCc-
Q psy505 17 ICCLCVNSDNCYLAYPGSNSIG--EVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDT- 85 (161)
Q Consensus 17 v~~~~~~~d~~~la~~g~~~dg--~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~- 85 (161)
+.+-+++|||+.||+.... .+ .+.+.+..++.. ..+..+........ ++.....++ ..++.......
T Consensus 41 ~~sP~wSPDGk~IAf~~~~-~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~spdg~~i~~~~~~~~~~~~~~~~~~~~~ 118 (269)
T d2hqsa1 41 LMSPAWSPDGSKLAYVTFE-SGRSALVIQTLANGAV-RQVASFPRHNGAPAFSPDGSKLAFALSKTGSLNLYVMDLASGQ 118 (269)
T ss_dssp EEEEEECTTSSEEEEEECT-TSSCEEEEEETTTCCE-EEEECCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTTCC
T ss_pred eeeeEECCCCCEEEEEEee-ccCcceeeeecccCce-eEEeeeecccccceecCCCCeeeEeeecCCccceeeccccccc
Confidence 4577789999999986542 33 466666665544 34444555555444 222233333 33333222111
Q ss_pred eeeEEeecCcceEEEEEeecCCeEEEEec-CCCCeEEEEecCCCCeEEEEEecCceEEEEECCc
Q psy505 86 LEQIYENSQEDVCIVERLFSSSLVAVVSL-SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRK 148 (161)
Q Consensus 86 ~~~~~~~~~~~~~v~~~~fs~~~~~~~s~-~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~ 148 (161)
......+.. ..........++....++. .....|.+.+...+................++|+
T Consensus 119 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~i~~~~~~~~~~~~~~~~~~~~~~~~~spd 181 (269)
T d2hqsa1 119 IRQVTDGRS-NNTEPTWFPDSQNLAFTSDQAGRPQVYKVNINGGAPQRITWEGSQNQDADVSSD 181 (269)
T ss_dssp EEECCCCSS-CEEEEEECTTSSEEEEEECTTSSCEEEEEETTSSCCEECCCSSSEEEEEEECTT
T ss_pred ceeeeeccc-cccccccccccccceecccccCCceEeeeecccccceeeecccccccccccccc
Confidence 111111111 1112222233455555543 2223577777777654332233456667788877
|
| >d2dg1a1 b.68.6.1 (A:6-324) Lactonase Drp35 {Staphylococcus aureus [TaxId: 1280]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Lactonase Drp35 species: Staphylococcus aureus [TaxId: 1280]
Probab=92.08 E-value=1.5 Score=31.80 Aligned_cols=138 Identities=13% Similarity=-0.004 Sum_probs=76.6
Q ss_pred eeEEeecCCCceEEEEcCCC----CcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCc
Q psy505 16 GICCLCVNSDNCYLAYPGSN----SIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSI 83 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~----~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~ 83 (161)
....++++|+|.+.++.... ..|.+..++... +.+..+...-..-+.++ ++.+-+..+ |..||+...
T Consensus 131 ~~nd~~~d~~G~l~vtd~~~~~~~~~g~v~~~~~dg-~~~~~~~~~~~~pnGia~s~dg~~lyvad~~~~~I~~~d~~~~ 209 (319)
T d2dg1a1 131 CIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF-RTVTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALEDD 209 (319)
T ss_dssp CEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS-CCEEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred CCcceeEEeccceeecccccccccCcceeEEEeccc-ceeEEEeeccceeeeeeeccccceEEEecccCCceEEEEEcCC
Confidence 45567778888776653210 013354455443 33333322222234444 445555566 999987542
Q ss_pred CceeeEEee-----cCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecC-------ceEEEEECCc--E
Q psy505 84 DTLEQIYEN-----SQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSN-------TILAVKLNRK--K 149 (161)
Q Consensus 84 ~~~~~~~~~-----~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~-------~V~~v~~~~~--~ 149 (161)
......... ......-..|++.+++...++....+.|.++|. .|+.+.++..+. .+.+++|.++ .
T Consensus 210 g~~~~~~~~~~~~~~~~~~~PdGl~vD~~G~l~Va~~~~g~V~~~~p-~G~~l~~i~~P~~~~~~~~~~~~~~~~~~~~~ 288 (319)
T d2dg1a1 210 GVTIQPFGATIPYYFTGHEGPDSCCIDSDDNLYVAMYGQGRVLVFNK-RGYPIGQILIPGRDEGHMLRSTHPQFIPGTNQ 288 (319)
T ss_dssp SSSEEEEEEEEEEECCSSSEEEEEEEBTTCCEEEEEETTTEEEEECT-TSCEEEEEECTTGGGTCSCBCCEEEECTTSCE
T ss_pred CceeccccceeeeccCCccceeeeeEcCCCCEEEEEcCCCEEEEECC-CCcEEEEEeCCCcCCCcCceeeeEEEeCCCCE
Confidence 211111111 111111246788887766666556789999996 699998887642 5789999774 5
Q ss_pred EEEEec
Q psy505 150 EEEEDE 155 (161)
Q Consensus 150 ~vv~~~ 155 (161)
+++...
T Consensus 289 ~~~t~~ 294 (319)
T d2dg1a1 289 LIICSN 294 (319)
T ss_dssp EEEEEE
T ss_pred EEEEcC
Confidence 655543
|
| >d1pjxa_ b.68.6.1 (A:) Diisopropylfluorophosphatase (phosphotriesterase, DFP) {Squid (Loligo vulgaris) [TaxId: 6622]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Diisopropylfluorophosphatase (phosphotriesterase, DFP) species: Squid (Loligo vulgaris) [TaxId: 6622]
Probab=91.31 E-value=0.77 Score=33.54 Aligned_cols=61 Identities=15% Similarity=0.111 Sum_probs=43.5
Q ss_pred EEeecCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEe
Q psy505 18 CCLCVNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSL 80 (161)
Q Consensus 18 ~~~~~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~ 80 (161)
-.++++++|.+.++... .+.|.+||..+++.+..+..+....++++ ++++.+..| |.-+++
T Consensus 229 dGiavD~~GnlyVa~~~--~g~I~~~dp~~g~~~~~i~~p~~~~t~~afg~d~~~lyVt~~~~g~i~~~~~ 297 (314)
T d1pjxa_ 229 DGMDFDEDNNLLVANWG--SSHIEVFGPDGGQPKMRIRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEW 297 (314)
T ss_dssp EEEEEBTTCCEEEEEET--TTEEEEECTTCBSCSEEEECSSSCEEEEEECTTSSEEEEEETTTTEEEEEEC
T ss_pred eeeEEecCCcEEEEEcC--CCEEEEEeCCCCEEEEEEECCCCCEEEEEEeCCCCEEEEEECCCCcEEEEEC
Confidence 35677888877665433 58899999998888777877666677777 455566666 666665
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=90.88 E-value=2.3 Score=31.73 Aligned_cols=79 Identities=10% Similarity=0.059 Sum_probs=55.9
Q ss_pred eEEEEeCCcCceeeEEeecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEecCceEEEEE-CCcEEEEE
Q psy505 75 YRLFSLNSIDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFSNTILAVKL-NRKKEEEE 153 (161)
Q Consensus 75 iriwd~~~~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~-~~~~~vv~ 153 (161)
+-|-|+...... .++.-... ..-|..+.+.+++=++ ++|+|+|+++.+.+..+.++.+|.==+| |++.|++|
T Consensus 47 VvIidl~n~~~~--~Rrpi~Ad--sAIMhP~~~IiALrag---~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lV 119 (327)
T d1utca2 47 VVIIDMNDPSNP--IRRPISAD--SAIMNPASKVIALKAG---KTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALV 119 (327)
T ss_dssp EEEEETTSTTSC--EEEECCCS--EEEECSSSSEEEEEET---TEEEEEETTTTEEEEEEECSSCCCEEEESSSSEEEEE
T ss_pred EEEEECCCCCcc--eecccchh--hhhcCCCCcEEEEecC---CeEEEEehhHhhhhceEEcCCCcEEEEecCCCEEEEE
Confidence 778888765432 22222212 2235667777777763 5899999999999999999877654555 99999999
Q ss_pred eccceee
Q psy505 154 DEEEEKK 160 (161)
Q Consensus 154 ~~~~~~~ 160 (161)
+++.+|-
T Consensus 120 T~taVYH 126 (327)
T d1utca2 120 TDNAVYH 126 (327)
T ss_dssp CSSEEEE
T ss_pred cCCceEE
Confidence 9998873
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=90.37 E-value=2.2 Score=30.59 Aligned_cols=114 Identities=9% Similarity=-0.084 Sum_probs=68.4
Q ss_pred cceEEEEEcCCCCceeeeeccCccceeee-----eEEEecCCceEEEEeCCcCceeeEEeec--CcceEEEEEeecCCeE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAALA-----SLSVGTKSGYRLFSLNSIDTLEQIYENS--QEDVCIVERLFSSSLV 109 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-----~lasgs~dgiriwd~~~~~~~~~~~~~~--~~~~~v~~~~fs~~~~ 109 (161)
.+.|.-||+.+++.. .+. -...+.+++ .|..|+.+|+.++|..+++. ..+.... ........+...|++.
T Consensus 39 ~~~I~r~d~~~g~~~-~~~-~~~~~~~i~~~~dg~l~va~~~gl~~~d~~tg~~-~~l~~~~~~~~~~~~nd~~vd~~G~ 115 (295)
T d2ghsa1 39 ERELHELHLASGRKT-VHA-LPFMGSALAKISDSKQLIASDDGLFLRDTATGVL-TLHAELESDLPGNRSNDGRMHPSGA 115 (295)
T ss_dssp GTEEEEEETTTTEEE-EEE-CSSCEEEEEEEETTEEEEEETTEEEEEETTTCCE-EEEECSSTTCTTEEEEEEEECTTSC
T ss_pred CCEEEEEECCCCeEE-EEE-CCCCcEEEEEecCCCEEEEEeCccEEeeccccee-eEEeeeecCCCcccceeeEECCCCC
Confidence 578999999887543 222 134566666 44456678899999998763 2232211 1234567778888876
Q ss_pred EEEec----CCCCeEEEEecCCCCeEEEEEecCceEEEEECCcE--EEEE
Q psy505 110 AVVSL----SSPRKLTVCHFKRGSEICNYSFSNTILAVKLNRKK--EEEE 153 (161)
Q Consensus 110 ~~~s~----~~d~~i~iWD~~~~~~i~~l~~~~~V~~v~~~~~~--~vv~ 153 (161)
..++. ...+.-.+|....++.......-..-..+.|+++. +.++
T Consensus 116 iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~~~~Ng~~~s~d~~~l~~~ 165 (295)
T d2ghsa1 116 LWIGTMGRKAETGAGSIYHVAKGKVTKLFADISIPNSICFSPDGTTGYFV 165 (295)
T ss_dssp EEEEEEETTCCTTCEEEEEEETTEEEEEEEEESSEEEEEECTTSCEEEEE
T ss_pred EEEEeccccccccceeEeeecCCcEEEEeeccCCcceeeecCCCceEEEe
Confidence 54442 11224567777777654433333456778888873 4444
|
| >d1flga_ b.70.1.1 (A:) Ethanol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Ethanol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.17 E-value=0.65 Score=37.18 Aligned_cols=52 Identities=23% Similarity=0.239 Sum_probs=39.3
Q ss_pred cceEEEEEcCCCCceeeeeccCcccee-ee----eEEEecCCc-eEEEEeCCcCceee
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLAA-LA----SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~~-l~----~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
.|.+.=+|+.+|+.+.....+.-...+ ++ ++..|+.|| +|-+|.+||+.+-+
T Consensus 465 ~G~l~AiD~~TG~i~W~~~~~~p~~~g~lstagglVF~Gt~dg~l~A~Da~TGe~LW~ 522 (582)
T d1flga_ 465 VGSLRAMDPVSGKVVWEHKEHLPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKELWK 522 (582)
T ss_dssp SEEEEEECTTTCCEEEEEEESSCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred CCeEEEEcCCCCcEEeecCCCCCCccceeEEcCCeEEEeCCCCeEEEEECCCCcEeEE
Confidence 478999999999998888755332222 22 666799999 99999999996643
|
| >d1kb0a2 b.70.1.1 (A:1-573) Quinoprotein alcohol dehydrogenase, N-terminal domain {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Comamonas testosteroni [TaxId: 285]
Probab=88.68 E-value=0.99 Score=36.00 Aligned_cols=52 Identities=15% Similarity=0.125 Sum_probs=38.4
Q ss_pred ceEEEEEcCCCCceeeeeccCccc-eeee----eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 38 GEVQIFDADNLHAKTMIPAHDSPL-AALA----SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 38 g~v~iWd~~~~~~~~~l~~H~~~V-~~l~----~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
|.+.-||+.+|+.+...+...-.. ..++ ++..|+.|| ++.||.+||+.+-++
T Consensus 457 G~l~AiD~~tGk~~W~~~~~~p~~gg~lstagglVF~G~~dg~l~A~Da~TGe~LW~~ 514 (573)
T d1kb0a2 457 GRLLAWDPVAQKAAWSVEHVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWEA 514 (573)
T ss_dssp EEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ccEEEeCCCCCceEeeecCCCCCCCceEEEcCCEEEEECCCCeEEEEECCCCcEeEEE
Confidence 679999999999988876432111 1233 666799999 999999999976433
|
| >d1k32a2 b.68.7.1 (A:39-319) Tricorn protease N-terminal domain {Archaeon Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Tricorn protease N-terminal domain family: Tricorn protease N-terminal domain domain: Tricorn protease N-terminal domain species: Archaeon Thermoplasma acidophilum [TaxId: 2303]
Probab=88.65 E-value=1.5 Score=30.00 Aligned_cols=102 Identities=11% Similarity=-0.000 Sum_probs=55.5
Q ss_pred CCC--ceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccceeee------eEEEe----cCC--c-eEEEEeCCcCcee
Q psy505 23 NSD--NCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLAALA------SLSVG----TKS--G-YRLFSLNSIDTLE 87 (161)
Q Consensus 23 ~~d--~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~------~lasg----s~d--g-iriwd~~~~~~~~ 87 (161)
+|| |..+|+.+ +|.|-+.|+.+++. ..|..+.+.+...+ .||-. +.+ + +.+++..+++..
T Consensus 7 sPdi~G~~v~f~~---~~dl~~~d~~~g~~-~~Lt~~~~~~~~p~~SPDG~~iaf~~~~~~~~~~~~i~~~~~~~g~~~- 81 (281)
T d1k32a2 7 NPDIHGDRIIFVC---CDDLWEHDLKSGST-RKIVSNLGVINNARFFPDGRKIAIRVMRGSSLNTADLYFYNGENGEIK- 81 (281)
T ss_dssp EEEEETTEEEEEE---TTEEEEEETTTCCE-EEEECSSSEEEEEEECTTSSEEEEEEEESTTCCEEEEEEEETTTTEEE-
T ss_pred CCCCCCCEEEEEe---CCcEEEEECCCCCE-EEEecCCCcccCEEECCCCCEEEEEEeeCCCCCceEEEEEEecCCceE-
Confidence 567 88999865 57788889998775 45666666565554 44422 122 2 555666665432
Q ss_pred eEEeecC----cceEEEEEeecCCeEEEEec------CCCCeEEEEecCCCC
Q psy505 88 QIYENSQ----EDVCIVERLFSSSLVAVVSL------SSPRKLTVCHFKRGS 129 (161)
Q Consensus 88 ~~~~~~~----~~~~v~~~~fs~~~~~~~s~------~~d~~i~iWD~~~~~ 129 (161)
++..... .........|+|++..++.. .....+...+...+.
T Consensus 82 ~lt~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~~~~~ 133 (281)
T d1k32a2 82 RITYFSGKSTGRRMFTDVAGFDPDGNLIISTDAMQPFSSMTCLYRVENDGIN 133 (281)
T ss_dssp ECCCCCEEEETTEECSEEEEECTTCCEEEEECTTSSSTTCCEEEEEEGGGTE
T ss_pred EeeecCCCccCccccccccccCCCCCEEEEEEccCCCccceeeeeecCCCce
Confidence 2211110 11123456788888666532 122235556665444
|
| >d1xfda1 b.70.3.1 (A:127-591) Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: DPP6 N-terminal domain-like family: DPP6 N-terminal domain-like domain: Dipeptidyl aminopeptidase-like protein 6, DPP6, N-terminal domain species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.14 E-value=1.3 Score=34.25 Aligned_cols=70 Identities=9% Similarity=0.016 Sum_probs=40.9
Q ss_pred eeEEeecCCCceEEEEcC--------CCCcceEEEEEcCCCCceeee--eccCccceeee------eEEEecCCceEEEE
Q psy505 16 GICCLCVNSDNCYLAYPG--------SNSIGEVQIFDADNLHAKTMI--PAHDSPLAALA------SLSVGTKSGYRLFS 79 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g--------~~~dg~v~iWd~~~~~~~~~l--~~H~~~V~~l~------~lasgs~dgiriwd 79 (161)
.+..+.++|||.+++... +. .|...++|+.+++..... .+....+.-.. .+|-..+..+.+.+
T Consensus 62 ~~~~~~~SpD~~~vl~~~~~~~~~r~s~-~~~~~i~d~~~~~~~~l~~~~~~~~~l~~~~wSPDG~~iafv~~~nl~~~~ 140 (465)
T d1xfda1 62 RAIRYEISPDREYALFSYNVEPIYQHSY-TGYYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFENNIYYCA 140 (465)
T ss_dssp TCSEEEECTTSSEEEEEESCCCCSSSCC-CSEEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEETTEEEEES
T ss_pred ccceeEECCCCCeEEEEEcccceeEeec-cccEEEEEccCCceeeccCccCCccccceeeeccCCceEEEEecceEEEEe
Confidence 455677899999887642 22 578999999988754332 22222222111 45544444466667
Q ss_pred eCCcCce
Q psy505 80 LNSIDTL 86 (161)
Q Consensus 80 ~~~~~~~ 86 (161)
..+++..
T Consensus 141 ~~~~~~~ 147 (465)
T d1xfda1 141 HVGKQAI 147 (465)
T ss_dssp SSSSCCE
T ss_pred cCCCceE
Confidence 6665543
|
| >d1kv9a2 b.70.1.1 (A:1-560) Quinoprotein alcohol dehydrogenase, N-terminal domain {Pseudomonas putida, hk5 [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Quinoprotein alcohol dehydrogenase, N-terminal domain species: Pseudomonas putida, hk5 [TaxId: 303]
Probab=85.44 E-value=2.2 Score=33.80 Aligned_cols=52 Identities=21% Similarity=0.212 Sum_probs=37.3
Q ss_pred cceEEEEEcCCCCceeeeeccCccce-eee----eEEEecCCc-eEEEEeCCcCceee
Q psy505 37 IGEVQIFDADNLHAKTMIPAHDSPLA-ALA----SLSVGTKSG-YRLFSLNSIDTLEQ 88 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~~~V~-~l~----~lasgs~dg-iriwd~~~~~~~~~ 88 (161)
.|.+.-||+.+|+.+..+.-...... .++ ++..|+.|| +|-+|.++|+.+-+
T Consensus 437 ~G~l~A~D~~tGk~~W~~~~~~~~~gg~l~TagglVF~G~~dg~l~A~Da~tGe~LW~ 494 (560)
T d1kv9a2 437 SGALLAWDPVKQKAAWKVPYPTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALWQ 494 (560)
T ss_dssp EEEEEEEETTTTEEEEEEEESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccceEEEeCCCCeEeeeccCCCCCCCceeEECCCEEEEECCCCcEEEEECCCCcEeEE
Confidence 47889999999998877653221111 122 666799999 99999999996633
|
| >d1utca2 b.69.6.1 (A:4-330) Clathrin heavy-chain terminal domain {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Clathrin heavy-chain terminal domain family: Clathrin heavy-chain terminal domain domain: Clathrin heavy-chain terminal domain species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=84.48 E-value=5.9 Score=29.40 Aligned_cols=105 Identities=10% Similarity=0.108 Sum_probs=67.1
Q ss_pred cCCCceEEEEcCCCCcceEEEEEcCCCCceeeeeccCccce----eeeeEEEecCCceEEEEeCCcCceeeEEeecC--c
Q psy505 22 VNSDNCYLAYPGSNSIGEVQIFDADNLHAKTMIPAHDSPLA----ALASLSVGTKSGYRLFSLNSIDTLEQIYENSQ--E 95 (161)
Q Consensus 22 ~~~d~~~la~~g~~~dg~v~iWd~~~~~~~~~l~~H~~~V~----~l~~lasgs~dgiriwd~~~~~~~~~~~~~~~--~ 95 (161)
.||....||.-+. .+++|+|+++++.++.++-.+.-|. +-..|+--+++.|.=|+++......+.+..|. .
T Consensus 70 MhP~~~IiALrag---~~LQiFnletK~klks~~~~e~VvfWkWis~~~L~lVT~taVYHW~~~g~s~P~k~fdR~~~L~ 146 (327)
T d1utca2 70 MNPASKVIALKAG---KTLQIFNIEMKSKMKAHTMTDDVTFWKWISLNTVALVTDNAVYHWSMEGESQPVKMFDRHSSLA 146 (327)
T ss_dssp ECSSSSEEEEEET---TEEEEEETTTTEEEEEEECSSCCCEEEESSSSEEEEECSSEEEEEESSSSCCCEEEEECCGGGT
T ss_pred cCCCCcEEEEecC---CeEEEEehhHhhhhceEEcCCCcEEEEecCCCEEEEEcCCceEEEcccCCCCchhhhhhccccc
Confidence 3788889988663 5899999999988888776654331 11167777777788999854322335666554 3
Q ss_pred ceEEEEEeecCCeEEEEe-c------CCCCeEEEEecCCCC
Q psy505 96 DVCIVERLFSSSLVAVVS-L------SSPRKLTVCHFKRGS 129 (161)
Q Consensus 96 ~~~v~~~~fs~~~~~~~s-~------~~d~~i~iWD~~~~~ 129 (161)
...|+...-+++..+++= | +-.+.+.||..+++.
T Consensus 147 ~~QIInY~~d~~~kW~~l~GI~~~~~~i~G~mQLYS~er~~ 187 (327)
T d1utca2 147 GCQIINYRTDAKQKWLLLTGISAQQNRVVGAMQLYSVDRKV 187 (327)
T ss_dssp TCEEEEEEECTTSCEEEEEEEEEETTEEEEEEEEEETTTTE
T ss_pred CceEEEEEECCCCCEEEEEeEecCCCceeEEEEEEEeccCc
Confidence 345666555665544321 1 112368999998763
|
| >d1k3ia3 b.69.1.1 (A:151-537) Galactose oxidase, central domain {Fungi (Fusarium sp.) [TaxId: 29916]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 7-bladed beta-propeller superfamily: Galactose oxidase, central domain family: Galactose oxidase, central domain domain: Galactose oxidase, central domain species: Fungi (Fusarium sp.) [TaxId: 29916]
Probab=83.70 E-value=6 Score=28.40 Aligned_cols=105 Identities=10% Similarity=-0.011 Sum_probs=54.4
Q ss_pred CCCceEEEEcCCCCc---c------eEEEEEcCCCCcee--eee-ccCccceeee------eEEEecCCc--eEEEEeCC
Q psy505 23 NSDNCYLAYPGSNSI---G------EVQIFDADNLHAKT--MIP-AHDSPLAALA------SLSVGTKSG--YRLFSLNS 82 (161)
Q Consensus 23 ~~d~~~la~~g~~~d---g------~v~iWd~~~~~~~~--~l~-~H~~~V~~l~------~lasgs~dg--iriwd~~~ 82 (161)
-.||+.++.+|...+ + .+.+||+.+++-.. .+. .|.....+.+ +++.|+.+. +.+||..+
T Consensus 28 ~~~gkv~v~GG~~~~~~~~~~~~~~~~~~yd~~t~~w~~~~~~~~~~~~~~~~~~~~~~g~i~v~Gg~~~~~~~~yd~~~ 107 (387)
T d1k3ia3 28 PTSGRVLMWSSYRNDAFGGSPGGITLTSSWDPSTGIVSDRTVTVTKHDMFCPGISMDGNGQIVVTGGNDAKKTSLYDSSS 107 (387)
T ss_dssp TTTTEEEEEEECCCTTTCSCCCSEEEEEEECTTTCCBCCCEEEECSCCCSSCEEEECTTSCEEEECSSSTTCEEEEEGGG
T ss_pred eeCCEEEEEEeecCcccCCCCCceeEEEEEECCCCcEeecCCCCCCcccceeEEEEecCCcEEEeecCCCcceeEecCcc
Confidence 348888888774201 1 37799999886432 222 2322222222 677777665 99999876
Q ss_pred cCceeeEEeecCcceEEEEEeecCCeEEEEecCC------CCeEEEEecCCCC
Q psy505 83 IDTLEQIYENSQEDVCIVERLFSSSLVAVVSLSS------PRKLTVCHFKRGS 129 (161)
Q Consensus 83 ~~~~~~~~~~~~~~~~v~~~~fs~~~~~~~s~~~------d~~i~iWD~~~~~ 129 (161)
.. -.+.-...... .-...+..+|+..++.++. -+.+.+||..+++
T Consensus 108 ~~-w~~~~~~~~~r-~~~~~~~~~dG~v~v~GG~~~~~~~~~~v~~yd~~~~~ 158 (387)
T d1k3ia3 108 DS-WIPGPDMQVAR-GYQSSATMSDGRVFTIGGSWSGGVFEKNGEVYSPSSKT 158 (387)
T ss_dssp TE-EEECCCCSSCC-SSCEEEECTTSCEEEECCCCCSSSCCCCEEEEETTTTE
T ss_pred Cc-ccccccccccc-cccceeeecCCceeeeccccccccccceeeeecCCCCc
Confidence 43 11111100000 0112334455444444321 2468999998764
|
| >d2ad6a1 b.70.1.1 (A:1-571) Methanol dehydrogenase, heavy chain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=83.16 E-value=1.2 Score=35.46 Aligned_cols=53 Identities=17% Similarity=0.106 Sum_probs=37.3
Q ss_pred cceEEEEEcCCCCceeeeeccC----ccceeee-eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 37 IGEVQIFDADNLHAKTMIPAHD----SPLAALA-SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 37 dg~v~iWd~~~~~~~~~l~~H~----~~V~~l~-~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
.|.+.-+|+.+|+.+....--. +++..-. ++..|+.|| ++-+|.++|+.+-+.
T Consensus 443 ~G~l~AiD~~TG~~~W~~~~~~~~~~g~l~TagglVf~G~~dg~l~A~Da~tGe~lW~~ 501 (571)
T d2ad6a1 443 MGQIRAFDLTTGKAKWTKWEKFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKELWNF 501 (571)
T ss_dssp CEEEEEECTTTCCEEEEEEESSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred cccEEEeccCCCceeeEcCCCCCCCcceeEecCCEEEEECCCCeEEEEECCCCcEEEEE
Confidence 3689999999999887764211 2221111 666799999 999999999966433
|
| >d1w6sa_ b.70.1.1 (A:) Methanol dehydrogenase, heavy chain {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 8-bladed beta-propeller superfamily: Quinoprotein alcohol dehydrogenase-like family: Quinoprotein alcohol dehydrogenase-like domain: Methanol dehydrogenase, heavy chain species: Methylobacterium extorquens [TaxId: 408]
Probab=82.77 E-value=1.3 Score=35.55 Aligned_cols=51 Identities=20% Similarity=0.106 Sum_probs=36.6
Q ss_pred ceEEEEEcCCCCceeeeeccCccce----eee--eEEEecCCc-eEEEEeCCcCceeeE
Q psy505 38 GEVQIFDADNLHAKTMIPAHDSPLA----ALA--SLSVGTKSG-YRLFSLNSIDTLEQI 89 (161)
Q Consensus 38 g~v~iWd~~~~~~~~~l~~H~~~V~----~l~--~lasgs~dg-iriwd~~~~~~~~~~ 89 (161)
|.+.-||+.+|+.+..... ..+.. +.+ ++..|+.|| ++-+|.+||+.+-+.
T Consensus 453 G~l~A~D~~TG~~~W~~~~-~~~~~gg~lsTagglVF~G~~Dg~l~A~Da~TGe~LW~~ 510 (596)
T d1w6sa_ 453 GQIKAYNAITGDYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLLWKF 510 (596)
T ss_dssp EEEEEECTTTCCEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEEEEE
T ss_pred ceEEEEeCCCCceecccCC-CCCCccceeEecCCEEEEECCCCeEEEEECCCCcEeeEE
Confidence 7899999999998766542 12222 111 666799999 999999999966433
|
| >d2ghsa1 b.68.6.1 (A:20-314) Regucalcin {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: 6-bladed beta-propeller superfamily: Calcium-dependent phosphotriesterase family: SGL-like domain: Regucalcin species: Agrobacterium tumefaciens [TaxId: 358]
Probab=82.63 E-value=6.4 Score=27.95 Aligned_cols=137 Identities=8% Similarity=0.014 Sum_probs=77.3
Q ss_pred eeEEeecCCCceEEEEcCCC--CcceEEEEEcCCCCceeeeeccCccceeee-------eEEEecCCc-eEEEEeCCcCc
Q psy505 16 GICCLCVNSDNCYLAYPGSN--SIGEVQIFDADNLHAKTMIPAHDSPLAALA-------SLSVGTKSG-YRLFSLNSIDT 85 (161)
Q Consensus 16 ~v~~~~~~~d~~~la~~g~~--~dg~v~iWd~~~~~~~~~l~~H~~~V~~l~-------~lasgs~dg-iriwd~~~~~~ 85 (161)
....+.++|+|.+.++.... ..+.-.+|.+..++....+.+. ..-+.++ ++.+-+..+ |..|++.....
T Consensus 104 ~~nd~~vd~~G~iw~~~~~~~~~~~~g~l~~~~~g~~~~~~~~~-~~~Ng~~~s~d~~~l~~~dt~~~~I~~~~~d~~~~ 182 (295)
T d2ghsa1 104 RSNDGRMHPSGALWIGTMGRKAETGAGSIYHVAKGKVTKLFADI-SIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTG 182 (295)
T ss_dssp EEEEEEECTTSCEEEEEEETTCCTTCEEEEEEETTEEEEEEEEE-SSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTC
T ss_pred cceeeEECCCCCEEEEeccccccccceeEeeecCCcEEEEeecc-CCcceeeecCCCceEEEeecccceeeEeeeccccc
Confidence 46677788898877654210 0234566776666544333321 1123333 455566666 88887642111
Q ss_pred e----eeEE-eecCcceEEEEEeecCCeEEEEecCCCCeEEEEecCCCCeEEEEEec-CceEEEEEC-C--cEEEEEe
Q psy505 86 L----EQIY-ENSQEDVCIVERLFSSSLVAVVSLSSPRKLTVCHFKRGSEICNYSFS-NTILAVKLN-R--KKEEEED 154 (161)
Q Consensus 86 ~----~~~~-~~~~~~~~v~~~~fs~~~~~~~s~~~d~~i~iWD~~~~~~i~~l~~~-~~V~~v~~~-~--~~~vv~~ 154 (161)
. ...+ ......-....+++..++..-++....+.|..||. .|+.+.++..+ ..+.+++|- | +.|.|-.
T Consensus 183 ~~~~~~~~~~~~~~~~g~pdG~~vD~~GnlWva~~~~g~V~~~dp-~G~~~~~i~lP~~~~T~~~FGG~d~~~LyvTt 259 (295)
T d2ghsa1 183 LPTGKAEVFIDSTGIKGGMDGSVCDAEGHIWNARWGEGAVDRYDT-DGNHIARYEVPGKQTTCPAFIGPDASRLLVTS 259 (295)
T ss_dssp CBSSCCEEEEECTTSSSEEEEEEECTTSCEEEEEETTTEEEEECT-TCCEEEEEECSCSBEEEEEEESTTSCEEEEEE
T ss_pred ccccceEEEeccCcccccccceEEcCCCCEEeeeeCCCceEEecC-CCcEeeEecCCCCceEEEEEeCCCCCEEEEEE
Confidence 0 0111 11111113456778776655555334468999996 58999999875 679999993 3 4566543
|