Psyllid ID: psy5293

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------36
Protein Sequence
MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccHHEEccccccccccccHHHHHHHHHHHHHHHHcccccEEEEcccccccccccHHHHHHHHHcccccccccccccccccccccccccccccEEEEEccccHHHHccccEEEEEEEccccccccccccccccccccccccccccccccccccHHHHHHHHHHcccccccccccEEcccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccHHHHHHHHHHcccccccccccHHHHHHHHHcccHHHHHHHHHHHHHcccccccccccccccccccccccccccccccccEEEEEccccccccccEEEEEEccc
Secondary Structure Prediction (SSPRO)
ccHHcccccccccccHHHHHHHHHHccEEEEEcccccccEEEEcccHHHHHHHHHHHHHcccccEEEEEEEEccccHHHHHHHHHcccEcccccccHHHcccccccccccEcEEcEEEEEEEEEHHHHHHccccccEEEEEEEEccccccccccccHHHcHHHccccHHHHHcccHHHHHHHHHHcccccEccEccHHHHHHHHHEEEEccccccccccccHHHHHHHHHHHHHHcccHHHccEEEccccccHHHHHHHHHHHHHHHcccccEEEccHHHHcEcHHHHHHHHHHHHHHHHHHcEEccccccccEcHHHccccEccccEEccccccEEEEEEEEccccEEEEEEEEcccc
Coil and Loop (DISEMBL)
mlyrgatttlspyfvnpffpnmvpagaisidmDSKVQTLCVYCLcygghaigDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALAtqfnnepaqasrpfdkrrdgfvmgeGSAILVLEELDHALARSANIYAEIIGYGMidlsdvlssnnalqgsynklspyfvtrilpnmsagqisiehgfqgpnhcvstacatgahaigmsgdghhltspredgRGALLAMTRALIDanlspgdisyinahatstplgdvielkaigslfpaqrlmvsstkgahghllgaagnLESAFTILAVHeglvppnvnledpceeaggyecptavtewktdgrrvalknsfgfggtnACLCIAEYKS
Flexible Loop (DISEMBL)
mlyrgatttlspyfvnPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATqfnnepaqasrpfdkrrdgFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKnsfgfggtnacLCIAEYKS
Low Complexity Region (SEG)
MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKgahghllgaagNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS
Disordered region (IsUnstruct)
*****ATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN**************DGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS**************GALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE***
Disordered Region (DISOPRED)
*****ATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK*
Disordered Region (DISEMBL)
MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS
Disordered Region (DISPRO)
*L**GATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	359	2.2.26 [Sep-21-2011]
O94297	426	Putative 3-oxoacyl-[acyl-	yes	N/A	0.807	0.680	0.397	1e-56
P55338	415	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.777	0.672	0.339	8e-42
Q9KQH9	414	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.779	0.676	0.350	2e-39
P43710	406	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.660	0.583	0.364	1e-38
Q9NWU1	459	3-oxoacyl-[acyl-carrier-p	no	N/A	0.417	0.326	0.572	1e-37
P57193	406	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.654	0.578	0.352	2e-37
Q9D404	459	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.417	0.326	0.546	9e-36
Q8L3X9	461	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.412	0.321	0.525	1e-35
P39525	442	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.777	0.631	0.329	1e-32
O34340	413	3-oxoacyl-[acyl-carrier-p	yes	N/A	0.370	0.322	0.528	4e-32

>sp|O94297|OXSM_SCHPO Putative 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPBC887.13c PE=3 SV=1

 Score =  220 bits (561), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 145/365 (39%), Positives = 187/365 (51%), Gaps = 75/365 (20%)

Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQ 59
           +L +     +SP  ++    NM PAG IS               C  G HAIGDAF  I+
Sbjct: 127 VLNKAGIRKVSPRVISKILINM-PAGYISQRYGFTALNHTTTTACAAGCHAIGDAFNFIK 185

Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            GHADV+IAG +ESCI+ L++A F + R+L+T+FN+ P  ASRPFD  RDGFV+GEGSA 
Sbjct: 186 LGHADVIIAGGSESCINPLTVAGFSKARSLSTKFNDNPKAASRPFDANRDGFVIGEGSAA 245

Query: 120 LVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAG 179
           LVLEEL+HA  R+A+IYAEI+GYG+   S                  Y +T   PN    
Sbjct: 246 LVLEELEHAKNRNAHIYAEIVGYGLASDS------------------YHITAPNPN---- 283

Query: 180 QISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSP 239
                                        GD  +    R            +L  A LS 
Sbjct: 284 -----------------------------GDAAYYAMKR------------SLKQAGLSA 302

Query: 240 GDISYINAHATSTPLGDVIELKAIGSLF-----PAQRLMVSSTKGAHGHLLGAAGNLESA 294
             + YINAHATST LGDV E  AI  L        +   VSS+KG+ GHLLGAAG +ES 
Sbjct: 303 SQLDYINAHATSTKLGDVAESIAITRLLCDVNRNPEAFPVSSSKGSIGHLLGAAGAIESV 362

Query: 295 FTILAVHEGLVPPNVNLE--DPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACL 352
           +T+L V +G++PP +N E  D  ++   ++C       K     VAL NSFGFGGTNA L
Sbjct: 363 YTVLTVQKGVLPPTLNFEYSDIPQQ---FQCDYVPNVAKESRINVALSNSFGFGGTNASL 419

Query: 353 CIAEY 357
           C  ++
Sbjct: 420 CFKKF 424

May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function.
Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)
EC: 2EC: .EC: 3EC: .EC: 1EC: .EC: 4EC: 1

>sp|P55338|FABF_VIBHA 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio harveyi GN=fabF PE=3 SV=2

 Score =  171 bits (433), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/351 (33%), Positives = 174/351 (49%), Gaps = 72/351 (20%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIA 68
           +SP+FV     NMV AG +SI    +   + +   C  G H IG A R+I  G A+ M+A
Sbjct: 130 VSPFFVPSTIVNMV-AGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDAEAMVA 188

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G AE   + L +A F   +AL+T+ N+EP +ASRP+DK RDGFV+G+G+ ++VLEE +HA
Sbjct: 189 GGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKGRDGFVLGDGAGVMVLEEYEHA 247

Query: 129 LARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQ 188
            AR A IYAE++G+GM        S +A          Y +T    + S G +++E   +
Sbjct: 248 KARGAKIYAELVGFGM--------SGDA----------YHMTSPSEDGSGGALAMEAAMR 289

Query: 189 GPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAH 248
             N   +      AH                                             
Sbjct: 290 DANITGTQVGYVNAH--------------------------------------------- 304

Query: 249 ATSTPLGDVIELKAIGSLF---PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLV 305
            TSTP GDV E+K +        +++++VSSTK   GHLLGAAG++E+  T+L++ + +V
Sbjct: 305 GTSTPAGDVAEIKGVKRALGEEGSKQVLVSSTKSMTGHLLGAAGSVEAIITVLSLVDQIV 364

Query: 306 PPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE 356
           PP +NL+DP E   G +        +      A+ NSFGFGGTN  L   +
Sbjct: 365 PPTINLDDPEE---GLDIDLVPHTARKVDMEYAICNSFGFGGTNGSLVFKK 412

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.

Vibrio harveyi (taxid: 669)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|Q9KQH9|FABF_VIBCH 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) GN=fabF PE=3 SV=3

 Score =  163 bits (413), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 121/345 (35%), Positives = 178/345 (51%), Gaps = 65/345 (18%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIA 68
           +SP+FV     NM+ AG +SI    +   + +   C  G H IG A R+I  G AD M+A
Sbjct: 130 VSPFFVPSTIVNMI-AGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVA 188

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G AE   + L +A F   +AL+T+ N+EP +ASRP+DK RDGFV+G+G+ I+VLEE +HA
Sbjct: 189 GGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGFVLGDGAGIMVLEEYEHA 247

Query: 129 LARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQ 188
            AR A IYAE++G+GM        S +A          Y +T    + S G +++E   +
Sbjct: 248 KARGAKIYAEVVGFGM--------SGDA----------YHMTSPSEDGSGGALAMEAAMR 289

Query: 189 GPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAH 248
                   A  TG   IG   + H  ++P  D    +  + RAL +A             
Sbjct: 290 -------DAGVTGEQ-IGYV-NAHGTSTPAGD-VAEVKGIKRALGEAG------------ 327

Query: 249 ATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPN 308
                                ++++VSSTK   GHLLGAAG++E+  T++++ + +VPP 
Sbjct: 328 --------------------TKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQMVPPT 367

Query: 309 VNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLC 353
           +NL++P EE  G +    V   K +    A+ NSFGFGGTN  L 
Sbjct: 368 INLDNP-EEGLGVDLVPHVAR-KVESMEYAMCNSFGFGGTNGSLI 410

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Has a preference for short chain acid substrates and may function to supply the octanoic substrates for lipoic acid biosynthesis.

Vibrio cholerae serotype O1 (strain ATCC 39315 / El Tor Inaba N16961) (taxid: 243277)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

>sp|P43710|FABB_HAEIN 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=fabB PE=3 SV=1

 Score =  160 bits (406), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 113/310 (36%), Positives = 151/310 (48%), Gaps = 73/310 (23%)

Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG A  LIQ G  DV+ AG AE  +S      F  + A++T++N  P +ASR +D  R
Sbjct: 167 HCIGHAVELIQLGKQDVVFAGGAEE-LSWECATEFDAMGAVSTKYNETPEKASRAYDANR 225

Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYF 168
           DGFV+  G A++V+EEL+HALAR A IYAEI+GYG            A    Y+ ++P  
Sbjct: 226 DGFVIAGGGAVVVVEELEHALARGAKIYAEIVGYG------------ATSDGYDMVAP-- 271

Query: 169 VTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAM 228
                              +G   C+  A AT             + +P           
Sbjct: 272 -----------------SGEGAERCMKQAMAT-------------VDTP----------- 290

Query: 229 TRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAA 288
                        I YIN H TSTP+GDV EL AI ++F  +   +SSTK   GH LGAA
Sbjct: 291 -------------IDYINVHGTSTPVGDVKELGAIKNVFGDKIPAISSTKSMTGHSLGAA 337

Query: 289 GNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTD-GRRVALKNSFGFGG 347
           G  E+ +T+L +    + P++N+E   E A G  C   VTE K + G +  + NSFGFGG
Sbjct: 338 GAHEAIYTLLMLDNDFIAPSINIETLDEAAEG--C-NIVTETKENAGLQTVMSNSFGFGG 394

Query: 348 TNACLCIAEY 357
           TNA L    Y
Sbjct: 395 TNATLIFKRY 404

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids.

Haemophilus influenzae (strain ATCC 51907 / DSM 11121 / KW20 / Rd) (taxid: 71421)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q9NWU1|OXSM_HUMAN 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Homo sapiens GN=OXSM PE=1 SV=1

 Score =  157 bits (396), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 87/152 (57%), Positives = 101/152 (66%), Gaps = 2/152 (1%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G+SGD  H+T+P  +G GAL  M  AL DA + P +ISYINAHATSTPLGD  E KAI  
Sbjct: 306 GLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKH 365

Query: 266 LFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           LF   A  L VSSTKGA GHLLGAAG +E+AFT LA +   +PP +NL+    E      
Sbjct: 366 LFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYV 425

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
           P    EWKT+ R + L NSFGFGGTNA LCIA
Sbjct: 426 PLKAQEWKTEKRFIGLTNSFGFGGTNATLCIA 457

May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|P57193|FABB_BUCAI 3-oxoacyl-[acyl-carrier-protein] synthase 1 OS=Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) GN=fabB PE=3 SV=1

 Score =  156 bits (395), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/312 (35%), Positives = 153/312 (49%), Gaps = 77/312 (24%)

Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+AF LIQ G  D++ AG  E    +L++  F  +RAL+T FNN+P +ASR +D  R
Sbjct: 169 HCIGNAFELIQFGRQDLIFAGGGEEISLELAMQ-FDAMRALSTCFNNDPKKASRVYDVYR 227

Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYF 168
           DGFV+  G+ +LV+EEL+ AL+RSA IYAEIIGY                          
Sbjct: 228 DGFVISGGAGMLVIEELNSALSRSAYIYAEIIGYA------------------------- 262

Query: 169 VTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAM 228
                                       A + G++ +  SGDG            A+  M
Sbjct: 263 ----------------------------ATSDGSNIVVPSGDG------------AIRCM 282

Query: 229 TRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRL-MVSSTKGAHGHLLGA 287
             A    N+ P D  Y+N H T T +GD+IEL+AI  +F  ++  M+S+TK   GH LGA
Sbjct: 283 NLARKGKNI-PID--YLNVHGTGTKIGDLIELEAIRKVFLNEKKPMISATKSMTGHGLGA 339

Query: 288 AGNLESAFTILAVHEGLVPPNVNLE--DPCEEAGGYECPTAVTEWKTDGRRVALKNSFGF 345
           +G  E  +T+L +    + P +N+E  +PC E       T   E  T     A+ NSFGF
Sbjct: 340 SGVHEMIYTLLMLKYNFIAPTINIENLEPCAENMNIIQKTTNIEINT-----AMSNSFGF 394

Query: 346 GGTNACLCIAEY 357
           GGTN  L + +Y
Sbjct: 395 GGTNVSLIVKKY 406

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Specific for elongation from C-10 to unsaturated C-16 and C-18 fatty acids.

Buchnera aphidicola subsp. Acyrthosiphon pisum (strain APS) (taxid: 107806)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q9D404|OXSM_MOUSE 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Mus musculus GN=Oxsm PE=2 SV=1

 Score =  151 bits (381), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 83/152 (54%), Positives = 100/152 (65%), Gaps = 2/152 (1%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G+SGD  H+T+P  +G GAL  M  A+ DA +SP  ISY+NAHATSTPLGD  E +AI  
Sbjct: 306 GLSGDAGHITAPDPEGEGALRCMAAAVKDAGVSPEQISYVNAHATSTPLGDAAENRAIKR 365

Query: 266 LFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           LF   A  L +SSTKGA GHLLGAAG +E+ FT LA +   +PP +NL+    E      
Sbjct: 366 LFRDHACALAISSTKGATGHLLGAAGAVEATFTALACYHQKLPPTLNLDCTEPEFDLNYV 425

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
           P    EWK +GR + L NSFGFGGTNA LCIA
Sbjct: 426 PLESQEWKAEGRCIGLTNSFGFGGTNATLCIA 457

May play a role in the biosynthesis of lipoic acid as well as longer chain fatty acids required for optimal mitochondrial function.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q8L3X9|KASM_ARATH 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial OS=Arabidopsis thaliana GN=KAS PE=1 SV=1

 Score =  150 bits (379), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 81/154 (52%), Positives = 102/154 (66%), Gaps = 6/154 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GMSGD HH+T P EDG+GA+LAMTRAL  + L P  I Y+NAHATSTP+GD +E +AI +
Sbjct: 308 GMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKT 367

Query: 266 LFPAQ----RLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY 321
           +F        L  SSTKGA GHLLGAAG +E+ F+ILA+H G+ P  +N+++P       
Sbjct: 368 VFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKR 427

Query: 322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
             P  +T  K    R A+ NSFGFGGTNA L  A
Sbjct: 428 FMP--LTTSKKMLVRTAMSNSFGFGGTNASLLFA 459

Catalyzes all the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP. Able to elongate saturated acyl chains from 4 to at least 16 carbons. Uses malonyl-CoA but not acetyl-CoA as primer substrate. When expressed in a heterologous system, reveals a bimodal distribution of products, with peaks at C8 and C14-C16.

Arabidopsis thaliana (taxid: 3702)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|P39525|CEM1_YEAST 3-oxoacyl-[acyl-carrier-protein] synthase homolog OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c) GN=CEM1 PE=1 SV=1

 Score =  140 bits (353), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 118/358 (32%), Positives = 166/358 (46%), Gaps = 79/358 (22%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           ++PYFV     NM  AG +SI  + +  +  V   C  G ++IGDAF  I+ G  D+ +A
Sbjct: 153 INPYFVPKILTNMA-AGNVSIKFNLRGLSHSVSTACATGNNSIGDAFNFIRLGMQDICVA 211

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           GA+E+ +  LS+A F R +++ T         SRPFD +R G          VL E    
Sbjct: 212 GASETSLHPLSLAGFIRAKSITTN------GISRPFDTQRSG---------FVLGE---- 252

Query: 129 LARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQ 188
                       G GMI +                                  S+EH  +
Sbjct: 253 ------------GCGMIVME---------------------------------SLEHAQK 267

Query: 189 GPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAH 248
              + +S          G+S D  H+TSP  DG GA  A+  AL  A L P D+ Y+NAH
Sbjct: 268 RNANIISELVG-----YGLSSDACHITSPPADGNGAKRAIEMALKMARLEPTDVDYVNAH 322

Query: 249 ATSTPLGDVIELKAIGS-LFP----AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEG 303
           ATST LGD  E  A+ S L P    ++ L +SS KGA GHLLGAAG +ES FTI ++ + 
Sbjct: 323 ATSTLLGDKAECLAVASALLPGRSKSKPLYISSNKGAIGHLLGAAGAVESIFTICSLKDD 382

Query: 304 LVPPNVNLEDPCE-EAGGYECPTAVTEWKTDGR--RVALKNSFGFGGTNACLCIAEYK 358
            +P  +NL++    E    +    + +    G   + AL NSFGFGG N  L   +++
Sbjct: 383 KMPHTLNLDNVLTLENNEADKLHFIRDKPIVGANPKYALCNSFGFGGVNTSLLFKKWE 440

Possibly involved in the synthesis of a specialized molecule, probably related to a fatty acid, which is essential for mitochondrial respiration. Is essential for oxygen uptake and the presence of cytochromes A and B.

Saccharomyces cerevisiae (strain ATCC 204508 / S288c) (taxid: 559292)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|O34340|FABF_BACSU 3-oxoacyl-[acyl-carrier-protein] synthase 2 OS=Bacillus subtilis (strain 168) GN=fabF PE=3 SV=1

 Score =  139 bits (350), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 74/140 (52%), Positives = 95/140 (67%), Gaps = 7/140 (5%)

Query: 9   TLSPYFVNPFF-PNMVP---AGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHA 63
           T  P  V+PFF P M+P    G ISI + +K    C    C  G ++IGDAF++IQ G A
Sbjct: 124 TKGPRRVSPFFVPMMIPDMATGQISIALGAKGVNSCTVTACATGTNSIGDAFKVIQRGDA 183

Query: 64  DVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLE 123
           DVM+ G  E+ ++++S A F   +AL+T  N +P  ASRPFDK RDGFVMGEG+ I+VLE
Sbjct: 184 DVMVTGGTEAPLTRMSFAGFSANKALST--NPDPKTASRPFDKNRDGFVMGEGAGIIVLE 241

Query: 124 ELDHALARSANIYAEIIGYG 143
           EL+HALAR A IY EI+GYG
Sbjct: 242 ELEHALARGAKIYGEIVGYG 261

Catalyzes the condensation reaction of fatty acid synthesis by the addition to an acyl acceptor of two carbons from malonyl-ACP.

Bacillus subtilis (strain 168) (taxid: 224308)

EC: 2

EC: .

EC: 3

EC: .

EC: 1

EC: .

EC: 1

EC: 7

EC: 9

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
296815350	426	beta-ketoacyl synthase [Arthroderma otae	0.785	0.661	0.408	4e-58
449302840	430	hypothetical protein BAUCODRAFT_382208 [	0.810	0.676	0.415	7e-58
223972627	376	3-oxoacyl-[acyl-carrier-protein] synthas	0.860	0.821	0.455	3e-57
52079631	412	3-oxoacyl-ACP synthase [Bacillus licheni	0.785	0.684	0.406	9e-57
91977445	421	3-oxoacyl-(acyl carrier protein) synthas	0.793	0.676	0.412	2e-56
189207418	344	3-oxoacyl-(acyl-carrier-protein) synthas	0.676	0.706	0.424	2e-56
423681605	412	3-oxoacyl-ACP synthetase [Bacillus liche	0.785	0.684	0.403	3e-56
117925169	414	3-oxoacyl-ACP synthase [Magnetococcus ma	0.782	0.678	0.399	5e-56
157691840	413	3-oxoacyl-(acyl carrier protein) synthas	0.782	0.680	0.396	7e-56
170741382	419	3-oxoacyl-(acyl-carrier-protein) synthas	0.796	0.682	0.414	8e-56

>gi|296815350|ref|XP_002848012.1| beta-ketoacyl synthase [Arthroderma otae CBS 113480] gi|238841037|gb|EEQ30699.1| beta-ketoacyl synthase [Arthroderma otae CBS 113480]

 Score =  231 bits (589), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 149/365 (40%), Positives = 191/365 (52%), Gaps = 83/365 (22%)

Query: 5   GATTTLSPYFVNPFFPNMVPAGAISIDM-----DSKVQTLCVYCLCYGGHAIGDAFRLIQ 59
           G    +SP FV     N+  AG IS+       +  V T C      G H+IGDA R I 
Sbjct: 133 GGYRKVSPLFVPKLLINL-GAGHISMKYGFMGPNHSVSTACTT----GAHSIGDASRFIA 187

Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G A+VMIAG AESCI  L+I  F R R+LAT FNN P +ASRPFDK R GFV+GEG+A+
Sbjct: 188 HGDANVMIAGGAESCIHPLAIGGFARCRSLATGFNNTPEKASRPFDKDRQGFVVGEGAAV 247

Query: 120 LVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAG 179
           ++LE                      +L   LS N  +   Y +L  Y            
Sbjct: 248 VILE----------------------ELEHALSRNARI---YAELKGY------------ 270

Query: 180 QISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSP 239
                                     G S D +H+T+P E+G+GA  AM RAL +A ++P
Sbjct: 271 --------------------------GCSADAYHITAPHENGKGAFSAMKRALKNAGVAP 304

Query: 240 GDISYINAHATSTPLGDVIELKAIGSLF-------PAQRLMVSSTKGAHGHLLGAAGNLE 292
             I YINAH TSTP+GD  E  A+ SLF        A  + +SSTKGA GHLLG AG +E
Sbjct: 305 SKIDYINAHGTSTPIGDAAENTAVKSLFLGPEGKAKASDINISSTKGAIGHLLGGAGAIE 364

Query: 293 SAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACL 352
           +AF++LA+ +G++PP +NLE+  EE      P    E K +   VAL NSFGFGGTN+ L
Sbjct: 365 AAFSVLAIDKGIMPPTINLENVTEEFDCNYVPNFAQEKKIE---VALTNSFGFGGTNSSL 421

Query: 353 CIAEY 357
           C A+Y
Sbjct: 422 CFAKY 426

Source: Arthroderma otae CBS 113480

Species: Arthroderma otae

Genus: Arthroderma

Family: Arthrodermataceae

Order: Onygenales

Class: Eurotiomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|449302840|gb|EMC98848.1| hypothetical protein BAUCODRAFT_382208 [Baudoinia compniacensis UAMH 10762]

 Score =  230 bits (587), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 151/363 (41%), Positives = 191/363 (52%), Gaps = 72/363 (19%)

Query: 4   RGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGH 62
           +G    +SP FV     N+  AG ISI    K         C  G HAIGDA RLI  G 
Sbjct: 132 QGGYRKVSPLFVPRLLINLA-AGHISIRYGFKGPNHAATTACTTGVHAIGDASRLIMFGD 190

Query: 63  ADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVL 122
           A+VM+AG AESCI  L++A F R R+LAT +N+ PA +SRPFD+ R GFV+GEG+ I+VL
Sbjct: 191 ANVMVAGGAESCIHPLAVAGFARARSLATAWNDNPAASSRPFDRDRAGFVIGEGAGIMVL 250

Query: 123 EELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQIS 182
           EEL+HA AR ANIYAE+ GYG       LSS+     +Y+  +P                
Sbjct: 251 EELEHAKARKANIYAEVRGYG-------LSSD-----AYHMTAPQ--------------- 283

Query: 183 IEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDI 242
                                     GDG +L            AM +AL  A L P  +
Sbjct: 284 ------------------------EDGDGAYL------------AMKQALKHAGLKPNAV 307

Query: 243 SYINAHATSTPLGDVIELKAIGSLF-------PAQRLMVSSTKGAHGHLLGAAGNLESAF 295
            Y+NAHATST LGD  E KAI  L         A  + +SSTKGA GHLLGAAG +E+ F
Sbjct: 308 DYVNAHATSTILGDAAENKAIKRLLLGSEGRKRASEVNISSTKGAIGHLLGAAGAVEAIF 367

Query: 296 TILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
           T LAV+  ++PP +NLE+P      ++C       +      AL NSFGFGGTNA LC+ 
Sbjct: 368 TALAVNHNVLPPTLNLENPGNPPEQFDCNYVAKVAQRRPVNAALSNSFGFGGTNASLCVT 427

Query: 356 EYK 358
           +Y+
Sbjct: 428 KYE 430

Source: Baudoinia compniacensis UAMH 10762

Species: Baudoinia compniacensis

Genus: Baudoinia

Family: Teratosphaeriaceae

Order: Capnodiales

Class: Dothideomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|223972627|ref|NP_001138863.1| 3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial isoform 2 precursor [Homo sapiens]

 Score =  228 bits (582), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/323 (45%), Positives = 185/323 (57%), Gaps = 14/323 (4%)

Query: 44  LCYGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRP 103
           L  G H + D  RLI G    V + G     I   S+AA+    +   QFN +   +   
Sbjct: 55  LGVGTHLVWD--RLIGGESGIVSLVGEEYKSIP-CSVAAYVPRGSDEGQFNEQNFVSKSD 111

Query: 104 FDKRRDGFVMGEGSAILVLEELD-HALARSANIYAEI-IGYGMIDLSDVLSSNNALQGS- 160
                   +M  G+A L +++   H  + +  +   + IG GMI L  V  +    Q   
Sbjct: 112 IKSMSSPTIMAIGAAELAMKDSGWHPQSEADQVATGVAIGMGMIPLEVVSETALNFQTKG 171

Query: 161 YNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS------GDGHHL 214
           YNK+SP+FV +IL NM+AGQ+SI +  +GPNH VSTAC TGAHA+G S      GD  H+
Sbjct: 172 YNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDAGHI 231

Query: 215 TSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRL 272
           T+P  +G GAL  M  AL DA + P +ISYINAHATSTPLGD  E KAI  LF   A  L
Sbjct: 232 TAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKHLFKDHAYAL 291

Query: 273 MVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKT 332
            VSSTKGA GHLLGAAG +E+AFT LA +   +PP +NL+    E      P    EWKT
Sbjct: 292 AVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVPLKAQEWKT 351

Query: 333 DGRRVALKNSFGFGGTNACLCIA 355
           + R + L NSFGFGGTNA LCIA
Sbjct: 352 EKRFIGLTNSFGFGGTNATLCIA 374

Source: Homo sapiens

Species: Homo sapiens

Genus: Homo

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

>gi|52079631|ref|YP_078422.1| 3-oxoacyl-ACP synthase [Bacillus licheniformis DSM 13 = ATCC 14580] gi|319646575|ref|ZP_08000804.1| beta-ketoacyl-acyl carrier protein synthase II [Bacillus sp. BT1B_CT2] gi|404488497|ref|YP_006712603.1| 3-oxoacyl-(acyl carrier protein) synthase II [Bacillus licheniformis DSM 13 = ATCC 14580] gi|52002842|gb|AAU22784.1| beta-ketoacyl-acyl carrier protein synthase II [Bacillus licheniformis DSM 13 = ATCC 14580] gi|52347496|gb|AAU40130.1| 3-oxoacyl-[acyl-carrier-protein] synthase FabF [Bacillus licheniformis DSM 13 = ATCC 14580] gi|317391163|gb|EFV71961.1| beta-ketoacyl-acyl carrier protein synthase II [Bacillus sp. BT1B_CT2]

 Score =  226 bits (577), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 145/357 (40%), Positives = 187/357 (52%), Gaps = 75/357 (21%)

Query: 9   TLSPYFVNPFF-PNMVP---AGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHA 63
           T  P  V+PFF P M+P    G ISI + +K    C    C  G ++IGDAF++IQ G A
Sbjct: 124 TKGPRRVSPFFVPMMIPDMATGQISISLGAKGVNSCTVTACATGTNSIGDAFKVIQRGDA 183

Query: 64  DVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLE 123
           DVMI+G  E+ ++++S A F   +AL+T  N +P  ASRPFDK RDGFVMGEG+ I+VLE
Sbjct: 184 DVMISGGTEAPLTRMSFAGFSANKALST--NPDPKTASRPFDKNRDGFVMGEGAGIVVLE 241

Query: 124 ELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISI 183
           EL+HAL R A IYAE++GYG        S+ +A          Y +T   PN   G    
Sbjct: 242 ELEHALNRGATIYAEVVGYG--------STGDA----------YHITAPAPNGEGG---- 279

Query: 184 EHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDIS 243
                                                    + AM  A+ DA LSP DI 
Sbjct: 280 -----------------------------------------VRAMKEAIKDAGLSPVDID 298

Query: 244 YINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVH 301
           YINAH TSTP  D  E  AI  +F   A +L VSSTK   GHLLGAAG +E+ F++LA+ 
Sbjct: 299 YINAHGTSTPYNDKFETIAIKEVFGEHAYKLAVSSTKSMTGHLLGAAGGIEAIFSVLAIK 358

Query: 302 EGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           EG++PP +N+E P E+      P        +   V L NS GFGG NA L   +Y+
Sbjct: 359 EGIIPPTINIETPDEDCDLDYVPDQARRQDVN---VVLSNSLGFGGHNATLIFKKYE 412

Source: Bacillus licheniformis DSM 13 = ATCC 14580

Species: Bacillus licheniformis

Genus: Bacillus

Family: Bacillaceae

Order: Bacillales

Class: Bacilli

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|91977445|ref|YP_570104.1| 3-oxoacyl-(acyl carrier protein) synthase II [Rhodopseudomonas palustris BisB5] gi|91683901|gb|ABE40203.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Rhodopseudomonas palustris BisB5]

 Score =  226 bits (575), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 148/359 (41%), Positives = 189/359 (52%), Gaps = 74/359 (20%)

Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQ 59
           +L       +SP+F+     N+  +G +SI+   K     V   C  G HAIGDA RLI 
Sbjct: 127 LLKERGPRKISPFFIPGRLINLA-SGYVSIEFGLKGPNHAVVTACSTGAHAIGDASRLIA 185

Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G ADVM+AG  ES IS+L++A FC  RAL+T FN+ P +ASRP+DK RDGFVMGEG+ +
Sbjct: 186 LGDADVMVAGGTESPISRLAMAGFCAARALSTGFNDAPQKASRPYDKDRDGFVMGEGAGV 245

Query: 120 LVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAG 179
           +VLEE +HA AR A IYAE+IGYG+        S +A          Y +T   P+    
Sbjct: 246 VVLEEYEHAKARGARIYAEVIGYGL--------SGDA----------YHITAPTPD---- 283

Query: 180 QISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSP 239
                                        GDG            A   MT A+  A +S 
Sbjct: 284 -----------------------------GDG------------AFRCMTAAIKRAGISV 302

Query: 240 GDISYINAHATSTPLGDVIELKAIGSLF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTI 297
            DI YINAH TSTPLGD IEL A   L    A R+ +SSTK + GHLLGAAG +E+ F  
Sbjct: 303 SDIDYINAHGTSTPLGDEIELGAAQRLLGNAASRVSMSSTKSSIGHLLGAAGAVEAIFCT 362

Query: 298 LAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRR--VALKNSFGFGGTNACLCI 354
           LA+ + + PP +NL++P       E    +  WK+  R   V L NSFGFGGTNA L +
Sbjct: 363 LAIRDNVAPPTINLDNPS-----VETAIDLVPWKSRAREINVVLSNSFGFGGTNASLIL 416

Source: Rhodopseudomonas palustris BisB5

Species: Rhodopseudomonas palustris

Genus: Rhodopseudomonas

Family: Bradyrhizobiaceae

Order: Rhizobiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|189207418|ref|XP_001940043.1| 3-oxoacyl-(acyl-carrier-protein) synthase, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP] gi|187976136|gb|EDU42762.1| 3-oxoacyl-(acyl-carrier-protein) synthase, mitochondrial precursor [Pyrenophora tritici-repentis Pt-1C-BFP]

 Score =  225 bits (574), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/313 (42%), Positives = 176/313 (56%), Gaps = 70/313 (22%)

Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H+IGDA RLIQ G AD+MIAG AESCI  L+I+ F R R+LAT FN+ P ++SRPFD+ R
Sbjct: 88  HSIGDASRLIQFGDADIMIAGGAESCIHPLAISGFARARSLATDFNDRPTESSRPFDRAR 147

Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYF 168
           +GFV+GEG+ ++VLEEL+HA  R A IYAE+ GYG       LSS+     +Y+  +P  
Sbjct: 148 NGFVIGEGAGVMVLEELEHAKNRGAQIYAEVAGYG-------LSSD-----AYHMTAPR- 194

Query: 169 VTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAM 228
                          E G QGP   +        HA+  +G                   
Sbjct: 195 ---------------EDG-QGPRLAMK-------HALRHAG------------------- 212

Query: 229 TRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLF-------PAQRLMVSSTKGAH 281
                   L P D+ Y+NAHATSTPLGD  E +AI  L         A ++ +SSTKGA 
Sbjct: 213 --------LKPSDVDYVNAHATSTPLGDAAENRAIKELLLGEDGKTAASKINISSTKGAI 264

Query: 282 GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKN 341
           GHLLGAAG++E+ FT+L +H  ++PP +NL +P +    ++C       +    +VAL N
Sbjct: 265 GHLLGAAGSVEAIFTVLGMHHNILPPTLNLNNPGDPPEDFDCNYVAKSAQQYDVKVALSN 324

Query: 342 SFGFGGTNACLCI 354
           SFGFGGTNA LC 
Sbjct: 325 SFGFGGTNASLCF 337

Source: Pyrenophora tritici-repentis Pt-1C-BFP

Species: Pyrenophora tritici-repentis

Genus: Pyrenophora

Family: Pleosporaceae

Order: Pleosporales

Class: Dothideomycetes

Phylum: Ascomycota

Superkingdom: Eukaryota

>gi|423681605|ref|ZP_17656444.1| 3-oxoacyl-ACP synthetase [Bacillus licheniformis WX-02] gi|383438379|gb|EID46154.1| 3-oxoacyl-ACP synthetase [Bacillus licheniformis WX-02]

 Score =  225 bits (573), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 144/357 (40%), Positives = 186/357 (52%), Gaps = 75/357 (21%)

Query: 9   TLSPYFVNPFF-PNMVP---AGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHA 63
           T  P  V+PFF P M+P    G ISI + +K    C    C  G ++IGDAF++IQ G A
Sbjct: 124 TKGPRRVSPFFVPMMIPDMATGQISISLGAKGVNSCTVTACATGTNSIGDAFKVIQRGDA 183

Query: 64  DVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLE 123
           DVMI+G  E+ ++++S A F   +AL+T  N +P  ASRPFDK RDGFVMGEG+ I+VLE
Sbjct: 184 DVMISGGTEAPLTRMSFAGFSANKALST--NPDPKTASRPFDKNRDGFVMGEGAGIVVLE 241

Query: 124 ELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISI 183
           EL+HAL R A IYAE++GYG        S+ +A          Y +T   PN   G    
Sbjct: 242 ELEHALNRGATIYAEVVGYG--------STGDA----------YHITAPAPNGEGG---- 279

Query: 184 EHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDIS 243
                                                    + AM  A+ DA LSP  I 
Sbjct: 280 -----------------------------------------VRAMKEAIKDAGLSPDSID 298

Query: 244 YINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVH 301
           YINAH TSTP  D  E  AI  +F   A +L VSSTK   GHLLGAAG +E+ F++LA+ 
Sbjct: 299 YINAHGTSTPYNDKFETIAIKEVFGEHAYKLAVSSTKSMTGHLLGAAGGIEAIFSVLAIK 358

Query: 302 EGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           EG++PP +N+E P E+      P        +   V L NS GFGG NA L   +Y+
Sbjct: 359 EGIIPPTINIETPDEDCDLDYVPDQARRQDVN---VVLSNSLGFGGHNATLIFKKYE 412

Source: Bacillus licheniformis WX-02

Species: Bacillus licheniformis

Genus: Bacillus

Family: Bacillaceae

Order: Bacillales

Class: Bacilli

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|117925169|ref|YP_865786.1| 3-oxoacyl-ACP synthase [Magnetococcus marinus MC-1] gi|117608925|gb|ABK44380.1| 3-oxoacyl-[acyl-carrier-protein] synthase II [Magnetococcus marinus MC-1]

 Score =  224 bits (571), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 141/353 (39%), Positives = 190/353 (53%), Gaps = 72/353 (20%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           +SP+F+     N+V +G ++I    +     V   C  G HAIGDA+R++Q G ADVM+A
Sbjct: 130 ISPFFIPMSLINLV-SGQLAIKYGLRGPNHAVVTACATGTHAIGDAYRIVQRGEADVMVA 188

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G AE+ I +L I  F   RAL+T+ N++P +ASRP+DK RDGFV  +G+ ++V+E ++HA
Sbjct: 189 GGAEAAICELGIGGFAAARALSTR-NDDPTRASRPWDKGRDGFVQSDGAGVVVVESMEHA 247

Query: 129 LARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQ 188
            AR A IYAE++GYGM        S +A          Y +T   P              
Sbjct: 248 KARGARIYAEVVGYGM--------SGDA----------YHITAPHP-------------- 275

Query: 189 GPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAH 248
                              SGDG            A   M  AL DA + P  I YINAH
Sbjct: 276 -------------------SGDG------------AARCMAAALKDAQMDPSGIGYINAH 304

Query: 249 ATSTPLGDVIELKAIGSLF---PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLV 305
            TSTP GDVIE KA+  +F    A+++MVSSTK   GHLLGAAG +E+ FT  A+HEG++
Sbjct: 305 GTSTPQGDVIETKAVKKIFGESGAKKVMVSSTKSMTGHLLGAAGGIEAIFTAKALHEGVI 364

Query: 306 PPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           PP +NL+DP  E      P    + + +    AL NSFGFGGTNA L +   +
Sbjct: 365 PPTINLDDPDPECDLDFVPHTARQEQVE---AALSNSFGFGGTNATLVLKRVR 414

Source: Magnetococcus marinus MC-1

Species: Magnetococcus marinus

Genus: Magnetococcus

Family: Magnetococcaceae

Order: Magnetococcales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

>gi|157691840|ref|YP_001486302.1| 3-oxoacyl-(acyl carrier protein) synthase II [Bacillus pumilus SAFR-032] gi|157680598|gb|ABV61742.1| beta-ketoacyl-acyl-carrier-protein synthase I [Bacillus pumilus SAFR-032]

 Score =  224 bits (570), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 140/353 (39%), Positives = 187/353 (52%), Gaps = 72/353 (20%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           +SP+FV    P+M   G ISI + +K    C    C  G ++IGDAF++IQ G AD MI 
Sbjct: 130 VSPFFVPMMIPDMA-TGQISIALGAKGVNSCTVTACATGTNSIGDAFKVIQRGDADAMIT 188

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  E+ ++++S A FC  +AL+T  N +P  ASRPFDK RDGFVMGEG+ I+VLEEL+HA
Sbjct: 189 GGTEAPLTKMSFAGFCANKALST--NPDPETASRPFDKNRDGFVMGEGAGIVVLEELEHA 246

Query: 129 LARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQ 188
           L R A IYAEI+GYG        S+ +A          Y +T   PN   G         
Sbjct: 247 LKRGATIYAEIVGYG--------STGDA----------YHITAPAPNGEGG--------- 279

Query: 189 GPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAH 248
                                               + AM  A+ DA LS  +I YINAH
Sbjct: 280 ------------------------------------VRAMKEAIRDAGLSVEEIDYINAH 303

Query: 249 ATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVP 306
            TSTP  D  E  AI  +F   A +L +SSTK   GHLLGAAG +E+ F++LA+ + ++P
Sbjct: 304 GTSTPYNDKFETMAIKEVFGEHANQLAISSTKSMTGHLLGAAGGVEAIFSVLAIKDSVIP 363

Query: 307 PNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS 359
           P +NLE P EE    +      E ++   +VAL NS GFGG NA +   +Y++
Sbjct: 364 PTINLETPDEEC---DLDYVANEARSKEVQVALSNSLGFGGHNATIIFKKYEA 413

Source: Bacillus pumilus SAFR-032

Species: Bacillus pumilus

Genus: Bacillus

Family: Bacillaceae

Order: Bacillales

Class: Bacilli

Phylum: Firmicutes

Superkingdom: Bacteria

>gi|170741382|ref|YP_001770037.1| 3-oxoacyl-(acyl-carrier-protein) synthase 2 [Methylobacterium sp. 4-46] gi|168195656|gb|ACA17603.1| 3-oxoacyl-(acyl-carrier-protein) synthase 2 [Methylobacterium sp. 4-46]

 Score =  223 bits (569), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 147/355 (41%), Positives = 191/355 (53%), Gaps = 69/355 (19%)

Query: 2   LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQG 60
           L+      +SP+F+     N+  +G +SI    K     V   C  G HA+GDA RLI  
Sbjct: 128 LFEKGPRRISPFFIPGRIINLA-SGQVSIAHGLKGPNHAVVTACSTGAHAVGDAARLIAL 186

Query: 61  GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
           G ADVM+AG AES I++LS+A F   RAL+T FN+ P QASRP+D+ RDGFVMGEG+ +L
Sbjct: 187 GDADVMLAGGAESPINRLSLAGFAACRALSTGFNDRPQQASRPYDRDRDGFVMGEGAGVL 246

Query: 121 VLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQ 180
           VLEE +HA AR A IYAE++GYG+        S +A          Y +T   P+     
Sbjct: 247 VLEEYEHAKARGARIYAEVVGYGL--------SGDA----------YHITSPSPD----- 283

Query: 181 ISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPG 240
                                       GDG +        R    A+ RA I    +P 
Sbjct: 284 ----------------------------GDGAY--------RCMSAAVKRAGI----APS 303

Query: 241 DISYINAHATSTPLGDVIELKAIGSLFPAQR-LMVSSTKGAHGHLLGAAGNLESAFTILA 299
           DI YINAH TSTPLGD +ELKA+  L    R + +SSTK A GHLLGAAG +E+ F++LA
Sbjct: 304 DIDYINAHGTSTPLGDELELKAVERLIGEARGVSMSSTKSATGHLLGAAGAIEAIFSVLA 363

Query: 300 VHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCI 354
           + + +VPP +NL++P  +      P      K D   V L NSFGFGGTNA L +
Sbjct: 364 IRDQVVPPTLNLDNPSVQTAIDLVPHEARRRKVD---VVLSNSFGFGGTNASLIL 415

Source: Methylobacterium sp. 4-46

Species: Methylobacterium sp. 4-46

Genus: Methylobacterium

Family: Methylobacteriaceae

Order: Rhizobiales

Class: Alphaproteobacteria

Phylum: Proteobacteria

Superkingdom: Bacteria

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	359
FB|FBgn0037356	447	CG12170 [Drosophila melanogast	0.392	0.315	0.555	8.6e-73
UNIPROTKB|G3V6R7	456	Oxsm "3-oxoacyl-[acyl-carrier-	0.448	0.353	0.473	5.4e-67
UNIPROTKB|Q9NWU1	459	OXSM "3-oxoacyl-[acyl-carrier-	0.367	0.287	0.536	2.9e-66
UNIPROTKB|F1MXW5	460	OXSM "3-oxoacyl-[acyl-carrier-	0.415	0.323	0.480	9.8e-66
UNIPROTKB|Q0VCA7	460	OXSM "3-oxoacyl-[acyl-carrier-	0.415	0.323	0.480	9.8e-66
UNIPROTKB|E2R866	460	OXSM "3-oxoacyl-[acyl-carrier-	0.367	0.286	0.544	1.3e-65
MGI|MGI:1918397	459	Oxsm "3-oxoacyl-ACP synthase,	0.367	0.287	0.536	4.8e-64
TAIR|locus:2058359	461	AT2G04540 [Arabidopsis thalian	0.373	0.290	0.522	2.6e-63
UNIPROTKB|Q0C090	428	fabF "3-oxoacyl-[acyl-carrier-	0.451	0.378	0.466	1.3e-59
TIGR_CMR|CHY_1445	412	CHY_1445 "3-oxoacyl-(acyl-carr	0.370	0.322	0.522	2e-59

FB|FBgn0037356 CG12170 [Drosophila melanogaster (taxid:7227)]

 Score = 378 (138.1 bits), Expect = 8.6e-73, Sum P(2) = 8.6e-73
 Identities = 80/144 (55%), Positives = 100/144 (69%)

Query:     2 LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQG 60
             L RG    +SP+FV    P+M   G IS+    +     V   C  G HA+GDA R I+ 
Sbjct:   155 LQRGYNR-VSPFFVPRLLPSMA-CGHISMRHGLRGPNHSVSTACATGAHALGDAMRFIRS 212

Query:    61 GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
             G AD+M+AG+ E+CI  LSIA FCR+RAL+T FN+ PA ASRPFDK RDGFVMGEG+A+L
Sbjct:   213 GDADLMLAGSGEACIDPLSIAGFCRLRALSTAFNDNPAVASRPFDKSRDGFVMGEGAAVL 272

Query:   121 VLEELDHALARSANIYAEIIGYGM 144
             +LEEL+HA AR A I AEI+GYG+
Sbjct:   273 LLEELEHARARGAPILAEILGYGL 296

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

UNIPROTKB|G3V6R7 Oxsm "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Rattus norvegicus (taxid:10116)]

 Score = 354 (129.7 bits), Expect = 5.4e-67, Sum P(2) = 5.4e-67
 Identities = 81/171 (47%), Positives = 100/171 (58%)

Query:   192 HCVSTACATGAHAIG--MSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHA 249
             H V       A  +G  +SGD  H+T+P  +G GAL  M  A+ DA +SP  ISY+NAHA
Sbjct:   287 HAVQRGARIYAEVLGYGLSGDAGHITAPDPEGEGALRCMAAAVKDAGVSPDQISYVNAHA 346

Query:   250 TSTPLGDVIELKAIGSLFP--AQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPP 307
             TSTPLGD  E +AI  LF   A+ L +SSTK            +E+AFT LA +   +PP
Sbjct:   347 TSTPLGDAAENRAIKRLFRDHARALAISSTKGATGHLLGAAGAVEAAFTALACYHHKLPP 406

Query:   308 NVNLEDPCEEAG---GYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
              +NL+  C EA     Y  P    EWKT+GR + L NSFGFGGTNA LCIA
Sbjct:   407 TLNLD--CTEAEFDLNY-VPLEAQEWKTEGRCIGLTNSFGFGGTNATLCIA 454

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0005739 "mitochondrion" evidence=IEA

GO:0006637 "acyl-CoA metabolic process" evidence=IEA

GO:0051790 "short-chain fatty acid biosynthetic process" evidence=IEA

GO:0051792 "medium-chain fatty acid biosynthetic process" evidence=IEA

UNIPROTKB|Q9NWU1 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 349 (127.9 bits), Expect = 2.9e-66, Sum P(2) = 2.9e-66
 Identities = 73/136 (53%), Positives = 92/136 (67%)

Query:    10 LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIA 68
             +SP+FV     NM  AG +SI    K     V   C  G HA+GD+FR I  G ADVM+A
Sbjct:   175 VSPFFVPKILVNMA-AGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVA 233

Query:    69 GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
             G  +SCIS LS+A F R RAL+T  N++P  A RPF  +RDGFVMGEG+A+LVLEE +HA
Sbjct:   234 GGTDSCISPLSLAGFSRARALST--NSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHA 291

Query:   129 LARSANIYAEIIGYGM 144
             + R A IYAE++GYG+
Sbjct:   292 VQRRARIYAEVLGYGL 307

GO:0006637 "acyl-CoA metabolic process" evidence=IDA

GO:0005739 "mitochondrion" evidence=IDA;IMP

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0051790 "short-chain fatty acid biosynthetic process" evidence=IDA

GO:0051792 "medium-chain fatty acid biosynthetic process" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F1MXW5 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 346 (126.9 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
 Identities = 74/154 (48%), Positives = 98/154 (63%)

Query:    10 LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIA 68
             +SP+FV     NM  +G +SI    K     V   C  G HA+GD+FR +  G ADVM+A
Sbjct:   176 VSPFFVPKILVNMA-SGQVSIRHKLKGPNHAVSTACTTGAHAVGDSFRFVAHGDADVMVA 234

Query:    69 GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
             G  +SCIS LS+A F R RAL+T  N +P  A RPF  +RDGFVMGEG+A+LVLEE  HA
Sbjct:   235 GGTDSCISPLSLAGFARARALST--NTDPKSACRPFHPQRDGFVMGEGAAVLVLEEHRHA 292

Query:   129 LARSANIYAEIIGYGMI-DLSDVLSSNNALQGSY 161
             L R A +YAEI+GYG+  D   + + +   +G++
Sbjct:   293 LRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAF 326

GO:0005739 "mitochondrion" evidence=IEA

GO:0051792 "medium-chain fatty acid biosynthetic process" evidence=IEA

GO:0051790 "short-chain fatty acid biosynthetic process" evidence=IEA

GO:0006637 "acyl-CoA metabolic process" evidence=IEA

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

UNIPROTKB|Q0VCA7 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 346 (126.9 bits), Expect = 9.8e-66, Sum P(2) = 9.8e-66
 Identities = 74/154 (48%), Positives = 98/154 (63%)

Query:    10 LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIA 68
             +SP+FV     NM  +G +SI    K     V   C  G HA+GD+FR +  G ADVM+A
Sbjct:   176 VSPFFVPKILVNMA-SGQVSIRHKLKGPNHAVSTACTTGAHAVGDSFRFVAHGDADVMVA 234

Query:    69 GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
             G  +SCIS LS+A F R RAL+T  N +P  A RPF  +RDGFVMGEG+A+LVLEE  HA
Sbjct:   235 GGTDSCISPLSLAGFARARALST--NTDPKSACRPFHPQRDGFVMGEGAAVLVLEEHRHA 292

Query:   129 LARSANIYAEIIGYGMI-DLSDVLSSNNALQGSY 161
             L R A +YAEI+GYG+  D   + + +   +G++
Sbjct:   293 LRRGARVYAEIVGYGLSGDAGHITAPDPGGEGAF 326

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

UNIPROTKB|E2R866 OXSM "3-oxoacyl-[acyl-carrier-protein] synthase, mitochondrial" [Canis lupus familiaris (taxid:9615)]

 Score = 351 (128.6 bits), Expect = 1.3e-65, Sum P(2) = 1.3e-65
 Identities = 74/136 (54%), Positives = 91/136 (66%)

Query:    10 LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIA 68
             +SP+FV     NM  AG +SI    K     V   C  G HA+GD+FR I  G ADVM+A
Sbjct:   176 VSPFFVPKILVNMA-AGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAQGDADVMVA 234

Query:    69 GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
             G  +SCIS LS+A F R RAL+T  N +P  A RPF  +RDGFVMGEG+A+LVLEE DHA
Sbjct:   235 GGTDSCISPLSLAGFSRARALST--NPDPKLACRPFHPKRDGFVMGEGAAVLVLEEYDHA 292

Query:   129 LARSANIYAEIIGYGM 144
             + R A IYAE++GYG+
Sbjct:   293 VQRGARIYAEVLGYGL 308

GO:0005739 "mitochondrion" evidence=IEA

GO:0051792 "medium-chain fatty acid biosynthetic process" evidence=IEA

GO:0051790 "short-chain fatty acid biosynthetic process" evidence=IEA

GO:0006637 "acyl-CoA metabolic process" evidence=IEA

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

MGI|MGI:1918397 Oxsm "3-oxoacyl-ACP synthase, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 338 (124.0 bits), Expect = 4.8e-64, Sum P(2) = 4.8e-64
 Identities = 73/136 (53%), Positives = 90/136 (66%)

Query:    10 LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIA 68
             +SP+FV     NM  AG +SI    K     V   C  G HA+GD+FR I  G ADVM+A
Sbjct:   175 VSPFFVPKILINMA-AGQVSIRYKLKGPNHSVSTACTTGAHAVGDSFRFIAHGDADVMVA 233

Query:    69 GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
             G  +SCIS LS+A F R RAL++  N +P  A RPF   RDGFVMGEG+A+LVLEE +HA
Sbjct:   234 GGTDSCISPLSLAGFSRARALSS--NPDPKLACRPFHPERDGFVMGEGAAVLVLEEHEHA 291

Query:   129 LARSANIYAEIIGYGM 144
             + R A IYAEI+GYG+
Sbjct:   292 VQRGARIYAEILGYGL 307

GO:0003824 "catalytic activity" evidence=IEA

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0006629 "lipid metabolic process" evidence=IEA

GO:0006631 "fatty acid metabolic process" evidence=IEA

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0006637 "acyl-CoA metabolic process" evidence=ISO

GO:0008152 "metabolic process" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016746 "transferase activity, transferring acyl groups" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0051790 "short-chain fatty acid biosynthetic process" evidence=ISO

GO:0051792 "medium-chain fatty acid biosynthetic process" evidence=ISO

TAIR|locus:2058359 AT2G04540 [Arabidopsis thaliana (taxid:3702)]

 Score = 342 (125.4 bits), Expect = 2.6e-63, Sum P(2) = 2.6e-63
 Identities = 71/136 (52%), Positives = 90/136 (66%)

Query:    10 LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIA 68
             LSP+F+     NM  +G +S+    +         C  G H+IGDA R+IQ G ADVM+A
Sbjct:   175 LSPFFIPKILVNMA-SGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVA 233

Query:    69 GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
             G  ES I  LS+A F R RAL+T+FN+ P +ASRPFD  RDGFV+GEGS ++VLEE +HA
Sbjct:   234 GGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHA 293

Query:   129 LARSANIYAEIIGYGM 144
               R A IYAE+ GYGM
Sbjct:   294 KRRGAKIYAELCGYGM 309

GO:0003824 "catalytic activity" evidence=IEA

GO:0004312 "fatty acid synthase activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0006633 "fatty acid biosynthetic process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:0009058 "biosynthetic process" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0000038 "very long-chain fatty acid metabolic process" evidence=RCA

GO:0009409 "response to cold" evidence=RCA

GO:0042335 "cuticle development" evidence=RCA

UNIPROTKB|Q0C090 fabF "3-oxoacyl-[acyl-carrier-protein] synthase 2" [Hyphomonas neptunium ATCC 15444 (taxid:228405)]

 Score = 362 (132.5 bits), Expect = 1.3e-59, Sum P(2) = 1.3e-59
 Identities = 77/165 (46%), Positives = 102/165 (61%)

Query:     2 LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQG 60
             L+      +SP+F+     N+  +G ISI    K     V   C  G HAIGD+ RLI  
Sbjct:   136 LHEHGPRKVSPFFIPASLINLA-SGQISIRHGLKGPNHSVVTACATGAHAIGDSARLISY 194

Query:    61 GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
             G ADVM+AG AE+ I +L IA FC  +A++T FN+ P +ASRP+DK RDGFVMGEG+A+L
Sbjct:   195 GDADVMVAGGAEAVIGRLGIAGFCAAKAMSTSFNDTPEKASRPYDKDRDGFVMGEGAAVL 254

Query:   121 VLEELDHALARSANIYAEIIGYGMI-DLSDVLSSNNALQGSYNKL 164
             VLEE +HA AR A IYAE+ GYG+  D   + +     +G Y  +
Sbjct:   255 VLEEYEHAKARGAKIYAEVAGYGLTGDAHHITAPAEGAEGGYRAM 299

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

TIGR_CMR|CHY_1445 CHY_1445 "3-oxoacyl-(acyl-carrier-protein) synthase II" [Carboxydothermus hydrogenoformans Z-2901 (taxid:246194)]

 Score = 347 (127.2 bits), Expect = 2.0e-59, Sum P(2) = 2.0e-59
 Identities = 71/136 (52%), Positives = 94/136 (69%)

Query:    10 LSPYFVNPFFPNMVPAG-AISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIA 68
             +SP+FV     NM     AI+  +    +T+   C   G +A+GDAFR +Q G  DV IA
Sbjct:   128 VSPFFVPMMIANMAGGQIAITFGLTGPNETIVSACAS-GANAVGDAFRCLQRGEVDVAIA 186

Query:    69 GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
             G AE+ I+ LS A FC ++A++T+ N+EP +ASRPFDK RDGFVMGEG+ IL+LE L+HA
Sbjct:   187 GGAEAAITPLSFAGFCSMKAMSTR-NDEPEKASRPFDKDRDGFVMGEGAGILILETLEHA 245

Query:   129 LARSANIYAEIIGYGM 144
             LAR A IY EI+GYG+
Sbjct:   246 LARGARIYGEIVGYGV 261

GO:0004315 "3-oxoacyl-[acyl-carrier-protein

GO:0006633 "fatty acid biosynthetic process" evidence=ISS

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
O94297	OXSM_SCHPO	2, ., 3, ., 1, ., 4, 1	0.3972	0.8077	0.6807	yes	N/A
Q02059	KASA_STRCO	2, ., 3, ., 1, ., -	0.3201	0.7855	0.6038	yes	N/A
Q8L3X9	KASM_ARATH	2, ., 3, ., 1, ., 4, 1	0.5259	0.4122	0.3210	yes	N/A
Q9KQH9	FABF_VIBCH	2, ., 3, ., 1, ., 1, 7, 9	0.3507	0.7799	0.6763	yes	N/A
P55338	FABF_VIBHA	2, ., 3, ., 1, ., 1, 7, 9	0.3390	0.7771	0.6722	yes	N/A
P39525	CEM1_YEAST	2, ., 3, ., 1, ., 4, 1	0.3296	0.7771	0.6312	yes	N/A
Q9D404	OXSM_MOUSE	2, ., 3, ., 1, ., 4, 1	0.5460	0.4178	0.3267	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	2.3.1	0.766

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	359
PTZ00050	421	PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein	4e-91
cd00834	406	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot	3e-63
TIGR03150	407	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei	4e-61
PRK08722	414	PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei	1e-57
PRK07314	411	PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei	2e-57
PLN02836	437	PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei	1e-55
TIGR03150	407	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei	2e-55
PRK07314	411	PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei	2e-55
PLN02836	437	PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei	5e-52
cd00834	406	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot	3e-51
COG0304	412	COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy	1e-50
PRK06333	424	PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei	9e-50
PRK05952	381	PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei	8e-49
PRK09116	405	PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei	4e-48
PRK06333	424	PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei	3e-46
COG0304	412	COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy	2e-45
PRK09185	392	PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei	3e-41
pfam02801	119	pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase	1e-34
PRK07910	418	PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei	2e-33
PRK08439	406	PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei	2e-33
PRK08439	406	PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei	1e-32
PLN02787	540	PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei	1e-31
PRK14691	342	PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei	1e-31
cd00833	421	cd00833, PKS, polyketide synthases (PKSs) polymeri	9e-31
COG3321	1061	COG3321, COG3321, Polyketide synthase modules and	1e-30
PRK14691	342	PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei	5e-30
PRK07967	406	PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei	1e-27
PRK07910	418	PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei	3e-27
PRK07967	406	PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei	1e-26
cd00828	407	cd00828, elong_cond_enzymes, "elongating" condensi	1e-26
PRK06501	425	PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei	1e-26
PRK07103	410	PRK07103, PRK07103, polyketide beta-ketoacyl:acyl	4e-26
PLN02787	540	PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei	4e-23
pfam00109	243	pfam00109, ketoacyl-synt, Beta-ketoacyl synthase,	5e-22
cd00825	332	cd00825, decarbox_cond_enzymes, decarboxylating co	1e-21
PLN02836	437	PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei	4e-20
PRK07103	410	PRK07103, PRK07103, polyketide beta-ketoacyl:acyl	3e-18
TIGR03150	407	TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei	1e-17
PRK07314	411	PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei	1e-17
PTZ00050	421	PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein	7e-17
PRK06501	425	PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei	1e-16
cd00834	406	cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot	2e-16
cd00832	399	cd00832, CLF, Chain-length factor (CLF) is a facto	4e-15
cd00825	332	cd00825, decarbox_cond_enzymes, decarboxylating co	2e-14
TIGR02813	2582	TIGR02813, omega_3_PfaA, polyketide-type polyunsat	2e-14
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	2e-14
COG0304	412	COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy	2e-13
PRK06333	424	PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei	2e-12
cd00833	421	cd00833, PKS, polyketide synthases (PKSs) polymeri	5e-11
cd00832	399	cd00832, CLF, Chain-length factor (CLF) is a facto	8e-11
pfam00109	243	pfam00109, ketoacyl-synt, Beta-ketoacyl synthase,	4e-10
smart00825	298	smart00825, PKS_KS, Beta-ketoacyl synthase	4e-10
PRK08439	406	PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei	3e-09
smart00825	298	smart00825, PKS_KS, Beta-ketoacyl synthase	4e-09
PRK08722	414	PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei	9e-09
PRK14691	342	PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei	1e-05
PLN02787	540	PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei	4e-05
PRK06519	398	PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protei	3e-04
cd00327	254	cd00327, cond_enzymes, Condensing enzymes; Family	7e-04
PRK09185	392	PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei	9e-04
cd00825	332	cd00825, decarbox_cond_enzymes, decarboxylating co	0.002

>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional

 Score =  279 bits (715), Expect = 4e-91
 Identities = 141/361 (39%), Positives = 186/361 (51%), Gaps = 68/361 (18%)

Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTL-CVYCLCYGGHAIGDAFRLIQ 59
            LY    + +SPYF+     NM  AG ++I    K  +   V     G H IG+AFR I+
Sbjct: 125 TLYEKGHSRVSPYFIPKILGNM-AAGLVAIKHKLKGPSGSAVTACATGAHCIGEAFRWIK 183

Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G AD+MI G  E+ I+ +S A F R+RAL T++N++P +ASRPFDK R GFVMGEG+ I
Sbjct: 184 YGEADIMICGGTEASITPVSFAGFSRMRALCTKYNDDPQRASRPFDKDRAGFVMGEGAGI 243

Query: 120 LVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAG 179
           LVLEEL+HAL R A IYAEI GYG        SS++A          + +T   P+    
Sbjct: 244 LVLEELEHALRRGAKIYAEIRGYG--------SSSDA----------HHITAPHPDGRGA 285

Query: 180 QISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSP 239
           +  +E                  +A+    +                      I+ N   
Sbjct: 286 RRCME------------------NALKDGAN----------------------ININ--- 302

Query: 240 GDISYINAHATSTPLGDVIELKAIGSLF---PAQRLMVSSTKGAHGHLLGAAGNLESAFT 296
            D+ Y+NAHATSTP+GD IELKAI  +F    A +L VSSTKG  GHLLGAAG +ES  T
Sbjct: 303 -DVDYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVT 361

Query: 297 ILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE 356
           IL+++E ++PP +NLE+P  E                     L  SFGFGG N  L   +
Sbjct: 362 ILSLYEQIIPPTINLENPDAECDLNLVQGKTAHPLQ-SIDAVLSTSFGFGGVNTALLFTK 420

Query: 357 Y 357
           Y
Sbjct: 421 Y 421

Length = 421

>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

 Score =  206 bits (527), Expect = 3e-63
 Identities = 82/166 (49%), Positives = 98/166 (59%), Gaps = 11/166 (6%)

Query: 197 ACATGAHAI------GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GA         G S D +H+T+P  DG GA  AM  AL DA LSP DI YINAH T
Sbjct: 244 AKARGAKIYAEILGYGASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYINAHGT 303

Query: 251 STPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPN 308
           STPL D  E KAI  +F   A+++ VSSTK   GHLLGAAG +E+  T+LA+ +G++PP 
Sbjct: 304 STPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPT 363

Query: 309 VNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCI 354
           +NLE+P  E      P    E      R AL NSFGFGG NA L  
Sbjct: 364 INLEEPDPECDLDYVPNEAREAPI---RYALSNSFGFGGHNASLVF 406

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406

>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II

 Score =  201 bits (513), Expect = 4e-61
 Identities = 80/150 (53%), Positives = 98/150 (65%), Gaps = 5/150 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GMSGD +H+T+P  +G GA  AM  AL DA ++P D+ YINAH TSTPLGD  E KAI  
Sbjct: 259 GMSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYINAHGTSTPLGDKAETKAIKR 318

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +F   A +L VSSTK   GHLLGAAG +E+ FT+LA+ +G+VPP +NL++P  E      
Sbjct: 319 VFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLALRDGIVPPTINLDNPDPECDLDYV 378

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLC 353
           P    E K D    AL NSFGFGG NA L 
Sbjct: 379 PNEAREAKID---YALSNSFGFGGHNASLV 405

3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407

>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  192 bits (488), Expect = 1e-57
 Identities = 126/347 (36%), Positives = 181/347 (52%), Gaps = 71/347 (20%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIA 68
           +SP+FV     NM+ AG +SI    +   + +   C  G H IG A R+I  G AD M+A
Sbjct: 130 VSPFFVPSTIVNMI-AGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVA 188

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G AE   + L +A F   +AL+T+ N+EP +ASRP+DK RDGFV+G+G+ ++VLEE +HA
Sbjct: 189 GGAEKASTPLGMAGFGAAKALSTR-NDEPQKASRPWDKDRDGFVLGDGAGMMVLEEYEHA 247

Query: 129 LARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQ 188
            AR A IYAE++G+GM        S +A          Y +T    + S G +++E    
Sbjct: 248 KARGAKIYAELVGFGM--------SGDA----------YHMTSPSEDGSGGALAME---- 285

Query: 189 GPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAH 248
                                                     A+ DA ++   I Y+NAH
Sbjct: 286 -----------------------------------------AAMRDAGVTGEQIGYVNAH 304

Query: 249 ATSTPLGDVIELKAIGSLF---PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLV 305
            TSTP GDV E+K I        +++++VSSTK   GHLLGAAG++E+  T++++ + +V
Sbjct: 305 GTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIV 364

Query: 306 PPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACL 352
           PP +NL+DP E       P   T  K +    A+ NSFGFGGTN  L
Sbjct: 365 PPTINLDDPEEGLDIDLVPH--TARKVESMEYAICNSFGFGGTNGSL 409

Length = 414

>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  191 bits (488), Expect = 2e-57
 Identities = 78/155 (50%), Positives = 100/155 (64%), Gaps = 5/155 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GM+GD +H+T+P  DG GA  AM  AL DA ++P DI YINAH TSTP GD  E +AI  
Sbjct: 260 GMTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYINAHGTSTPAGDKAETQAIKR 319

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +F   A ++ VSSTK   GHLLGAAG +E+ F++LA+ + ++PP +NL++P EE      
Sbjct: 320 VFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYV 379

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           P    E K D    AL NSFGFGGTNA L    Y+
Sbjct: 380 PNEARERKID---YALSNSFGFGGTNASLVFKRYE 411

Length = 411

>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase

 Score =  187 bits (476), Expect = 1e-55
 Identities = 84/151 (55%), Positives = 102/151 (67%), Gaps = 6/151 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GMSGD HH+T P EDGRGA+LAMTRAL  + L P  + Y+NAHATSTPLGD +E +AI +
Sbjct: 283 GMSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVNAHATSTPLGDAVEARAIKT 342

Query: 266 LF----PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY 321
           +F     +  L  SSTKGA GHLLGAAG +E+ F++LA+H G+ PP +NLE P       
Sbjct: 343 VFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDG 402

Query: 322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACL 352
             P  +T  K    R AL NSFGFGGTNA L
Sbjct: 403 FVP--LTASKAMLIRAALSNSFGFGGTNASL 431

Length = 437

>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II

 Score =  186 bits (474), Expect = 2e-55
 Identities = 82/136 (60%), Positives = 96/136 (70%), Gaps = 8/136 (5%)

Query: 15  VNPFF-----PNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           V+PFF      NM  AG ISI   +K     V   C  G HAIGDAFRLIQ G ADVMIA
Sbjct: 127 VSPFFIPMSIINMA-AGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIA 185

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G AE+ I+ L IA F  ++AL+T  N++P +ASRPFDK RDGFVMGEG+ +LVLEEL+HA
Sbjct: 186 GGAEAAITPLGIAGFAAMKALST-RNDDPEKASRPFDKDRDGFVMGEGAGVLVLEELEHA 244

Query: 129 LARSANIYAEIIGYGM 144
            AR A IYAEI+GYGM
Sbjct: 245 KARGAKIYAEIVGYGM 260

3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407

>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  186 bits (475), Expect = 2e-55
 Identities = 78/135 (57%), Positives = 94/135 (69%), Gaps = 3/135 (2%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG 69
           SP+FV     NM  AG +SI   +K     +   C  G HAIGDA RLI  G ADVM+AG
Sbjct: 129 SPFFVPMAIINMA-AGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAG 187

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
            AE+ I+ L IA F   RAL+T+ N++P +ASRPFDK RDGFVMGEG+ ILVLEEL+HA 
Sbjct: 188 GAEAAITPLGIAGFAAARALSTR-NDDPERASRPFDKDRDGFVMGEGAGILVLEELEHAK 246

Query: 130 ARSANIYAEIIGYGM 144
           AR A IYAE++GYGM
Sbjct: 247 ARGAKIYAEVVGYGM 261

Length = 411

>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase

 Score =  178 bits (452), Expect = 5e-52
 Identities = 77/136 (56%), Positives = 92/136 (67%), Gaps = 2/136 (1%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           LSP+FV     NM  AG +SI    +         C  G H+IGDAFR+IQ G ADVM+A
Sbjct: 150 LSPFFVPRILINMA-AGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVA 208

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  ES I  LSIA F R RAL+T+FN+ P +ASRPFD  RDGFV+GEG+ +LVLEEL+HA
Sbjct: 209 GGTESSIDALSIAGFSRSRALSTKFNSCPTEASRPFDCDRDGFVIGEGAGVLVLEELEHA 268

Query: 129 LARSANIYAEIIGYGM 144
             R A IYAE+ GYGM
Sbjct: 269 KRRGAKIYAEVRGYGM 284

Length = 437

>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

 Score =  175 bits (446), Expect = 3e-51
 Identities = 74/136 (54%), Positives = 97/136 (71%), Gaps = 3/136 (2%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIA 68
           +SP+FV    PNM  AG ++I +  +     V   C  G HAIGDA RLI+ G ADV+IA
Sbjct: 127 VSPFFVPMALPNM-AAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIA 185

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G AE+ I+ L++A F  +RAL+T+ N++P +ASRPFDK RDGFV+GEG+ +LVLE L+HA
Sbjct: 186 GGAEALITPLTLAGFAALRALSTR-NDDPEKASRPFDKDRDGFVLGEGAGVLVLESLEHA 244

Query: 129 LARSANIYAEIIGYGM 144
            AR A IYAEI+GYG 
Sbjct: 245 KARGAKIYAEILGYGA 260

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406

>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

 Score =  173 bits (442), Expect = 1e-50
 Identities = 72/153 (47%), Positives = 92/153 (60%), Gaps = 4/153 (2%)

Query: 204 AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAI 263
             G + D +H+T+P  DG GA+ AM  AL DA L+P DI YINAH TSTP  D  E  AI
Sbjct: 258 GYGTTSDAYHITAPAPDGEGAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAI 317

Query: 264 GSLFPAQ--RLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY 321
             +F      L VSSTK   GH LGAAG +E+  ++LA+ +G++PP +NL++P  EA   
Sbjct: 318 KRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAADL 377

Query: 322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCI 354
           +        +T   R AL NSFGFGGTNA L  
Sbjct: 378 DVVPNEA--RTGAVRAALSNSFGFGGTNASLVF 408

Length = 412

>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  171 bits (436), Expect = 9e-50
 Identities = 74/170 (43%), Positives = 98/170 (57%), Gaps = 11/170 (6%)

Query: 197 ACATGAHAI------GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GA  +      G S D +H+T+  EDG GA  AM  AL  A + P ++ ++NAHAT
Sbjct: 257 ALARGAPPLAELVGYGTSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEVQHLNAHAT 316

Query: 251 STPLGDVIELKAIGSLFPAQR-LMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNV 309
           STP+GD+ E+ AI  +F     L VSSTK A GHLLGAAG +E+ FTILA+ + + PP +
Sbjct: 317 STPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTL 376

Query: 310 NLEDPCEEAGGYE-CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           NLE+P   A G +           D    AL N FGFGG NA +    ++
Sbjct: 377 NLENPDPAAEGLDVVANKARPMDMD---YALSNGFGFGGVNASILFRRWE 423

Length = 424

>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  168 bits (427), Expect = 8e-49
 Identities = 103/306 (33%), Positives = 147/306 (48%), Gaps = 77/306 (25%)

Query: 50  AIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRD 109
           AI     LIQ G    +IAGA E+ I+ L++A F ++ ALA          + PFD++R+
Sbjct: 152 AIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMGALAKT-------GAYPFDRQRE 204

Query: 110 GFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFV 169
           G V+GEG AILVLE  + A  R     A+I  YG                          
Sbjct: 205 GLVLGEGGAILVLESAELAQKRG----AKI--YG-------------------------- 232

Query: 170 TRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMT 229
            +IL            GF                  G++ D +H+++P  DG+ A+ A+ 
Sbjct: 233 -QIL------------GF------------------GLTCDAYHMSAPEPDGKSAIAAIQ 261

Query: 230 RALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAG 289
           + L  + L+P DI YI+AH T+T L D  E   I +LFP  R+ VSSTKGA GH LGA+G
Sbjct: 262 QCLARSGLTPEDIDYIHAHGTATRLNDQREANLIQALFP-HRVAVSSTKGATGHTLGASG 320

Query: 290 NLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTN 349
            L  AF++LA+    +PP V L++P  +         V + +    +  L  SFGFGG N
Sbjct: 321 ALGVAFSLLALRHQQLPPCVGLQEPEFDL------NFVRQAQQSPLQNVLCLSFGFGGQN 374

Query: 350 ACLCIA 355
           A + + 
Sbjct: 375 AAIALG 380

Length = 381

>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  167 bits (424), Expect = 4e-48
 Identities = 100/309 (32%), Positives = 139/309 (44%), Gaps = 72/309 (23%)

Query: 47  GGHAIGDAFRLIQGGHADVMIAGAAES-CISQLSIAAFCRVRALATQFNNEPAQASRPFD 105
           G   IG A+  I+ G+  VM+AG AE  C ++   A F  + A +T+ N+ P    RPFD
Sbjct: 167 GSQGIGYAYEAIKYGYQTVMLAGGAEELCPTE--AAVFDTLFATSTR-NDAPELTPRPFD 223

Query: 106 KRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLS 165
             RDG V+GEG+  LVLEEL+HA AR A IYAEI+G+G         +N+          
Sbjct: 224 ANRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFG---------TNS---------D 265

Query: 166 PYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGAL 225
              VT+  P     QI++E   +                                     
Sbjct: 266 GAHVTQ--PQAETMQIAMELALK------------------------------------- 286

Query: 226 LAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLL 285
                   DA L+P DI Y+NAH T+T  GD+ E +A  ++F A R+ +SS K   GH L
Sbjct: 287 --------DAGLAPEDIGYVNAHGTATDRGDIAESQATAAVFGA-RMPISSLKSYFGHTL 337

Query: 286 GAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGF 345
           GA G LE+  +I  ++EG   P +NL       G       + E +       + N+F F
Sbjct: 338 GACGALEAWMSIEMMNEGWFAPTLNLTQVDPACG--ALDYIMGEAREIDTEYVMSNNFAF 395

Query: 346 GGTNACLCI 354
           GG N  L  
Sbjct: 396 GGINTSLIF 404

Length = 405

>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  162 bits (412), Expect = 3e-46
 Identities = 71/140 (50%), Positives = 89/140 (63%), Gaps = 10/140 (7%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSK-----VQTLCVYCLCYGGHAIGDAFRLIQGGHAD 64
           LSP+ +  F  NM  AG +SI    K       T C      G  AIGDA RLI+ G AD
Sbjct: 139 LSPFTIPSFLTNMA-AGHVSIRYGFKGPLGAPVTACAA----GVQAIGDAARLIRSGEAD 193

Query: 65  VMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEE 124
           V + G  E+ I ++S+A F   RAL+T+FN+ P QASRPFD+ RDGFVMGEG+ ILV+E 
Sbjct: 194 VAVCGGTEAAIDRVSLAGFAAARALSTRFNDAPEQASRPFDRDRDGFVMGEGAGILVIET 253

Query: 125 LDHALARSANIYAEIIGYGM 144
           L+HALAR A   AE++GYG 
Sbjct: 254 LEHALARGAPPLAELVGYGT 273

Length = 424

>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

 Score =  160 bits (406), Expect = 2e-45
 Identities = 77/145 (53%), Positives = 97/145 (66%), Gaps = 3/145 (2%)

Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQ 59
           +L  G    +SP+ V    PN+  AG ++I    K         C  G HAIGDA RLI+
Sbjct: 119 LLLEGLRKRISPFLVPKMLPNLA-AGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIR 177

Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G ADV+IAG AE+ I+ L IA F  +RAL+T+ N++P +ASRPFDK RDGFV+GEG+  
Sbjct: 178 LGKADVVIAGGAEAAITPLGIAGFEAMRALSTR-NDDPEKASRPFDKNRDGFVIGEGAGA 236

Query: 120 LVLEELDHALARSANIYAEIIGYGM 144
           LVLEEL+HALAR A IYAEI+GYG 
Sbjct: 237 LVLEELEHALARGAKIYAEIVGYGT 261

Length = 412

>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score =  148 bits (376), Expect = 3e-41
 Identities = 66/152 (43%), Positives = 85/152 (55%), Gaps = 12/152 (7%)

Query: 205 IGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG 264
           +G S D HH+++P  +G GA+LAM +AL DA L+P DI YIN H T+TPL D +E +A+ 
Sbjct: 243 VGESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHGTATPLNDAMESRAVA 302

Query: 265 SLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLE--DPCEEAGGYE 322
           ++F    +  SSTKG  GH LGAAG +E+A   LA+  GL P   N    DP        
Sbjct: 303 AVFGD-GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDP-------A 354

Query: 323 CPTA--VTEWKTDGRRVALKNSFGFGGTNACL 352
            P    V   +    R  L NSF FGG N  L
Sbjct: 355 LPPLYLVENAQALAIRYVLSNSFAFGGNNCSL 386

Length = 392

>gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain

 Score =  123 bits (311), Expect = 1e-34
 Identities = 41/109 (37%), Positives = 55/109 (50%), Gaps = 4/109 (3%)

Query: 208 SGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLF 267
                H      +G     A+  AL DA L P D+ Y+ AH T TPLGD IE +A+ ++F
Sbjct: 11  QDGAAHNGLTAPNGPAQARAIRAALADAGLDPEDVDYVEAHGTGTPLGDPIEAEALKAVF 70

Query: 268 PA----QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLE 312
                 Q L V S K   GHL  AAG       +LA+  G++PP +NL+
Sbjct: 71  GPGRDSQPLPVGSVKSNIGHLEAAAGVAGLIKAVLALRHGVIPPTLNLD 119

The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 119

>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  127 bits (322), Expect = 2e-33
 Identities = 64/152 (42%), Positives = 88/152 (57%), Gaps = 3/152 (1%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
            ++ DG H+ +P  +G  A  AMTRA+  A L+PGDI ++NAHAT T +GDV E KAI +
Sbjct: 270 SITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDIDHVNAHATGTSVGDVAEGKAINN 329

Query: 266 LFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
                R  V + K A GH +GA G +ES  T+LA+ +G++PP +NLE+   E    +   
Sbjct: 330 ALGGHRPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEI---DLDV 386

Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
              E +    R A+ NSFGFGG N  L    Y
Sbjct: 387 VAGEPRPGNYRYAINNSFGFGGHNVALAFGRY 418

Length = 418

>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  127 bits (321), Expect = 2e-33
 Identities = 65/135 (48%), Positives = 84/135 (62%), Gaps = 3/135 (2%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTL-CVYCLCYGGHAIGDAFRLIQGGHADVMIA 68
           +SP+F+     NM+  G ISI+   K   L  V     G HAI +A + I  G AD M+ 
Sbjct: 128 ISPFFIPSALVNML-GGFISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLV 186

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
             AES I  + I  F  ++AL+T+ N++P +ASRPFDK RDGFVMGEG+  LVLEE + A
Sbjct: 187 VGAESAICPVGIGGFAAMKALSTR-NDDPKKASRPFDKDRDGFVMGEGAGALVLEEYESA 245

Query: 129 LARSANIYAEIIGYG 143
             R A IYAEIIG+G
Sbjct: 246 KKRGAKIYAEIIGFG 260

Length = 406

>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  125 bits (316), Expect = 1e-32
 Identities = 67/164 (40%), Positives = 88/164 (53%), Gaps = 15/164 (9%)

Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A   GA         G SGD +H+TSP  +G   L AM  AL  A      I YINAH T
Sbjct: 245 AKKRGAKIYAEIIGFGESGDANHITSPAPEG--PLRAMKAALEMAGNPK--IDYINAHGT 300

Query: 251 STPLGDVIELKAIGSLFPAQRLM--VSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPN 308
           STP  D  E  A+  LF ++  +  VSSTKG  GH LGAAG +E+  +I+A+ +G++PP 
Sbjct: 301 STPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPT 360

Query: 309 VNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACL 352
           +N E P  E      P    + + +   V + NSFGFGGTN  +
Sbjct: 361 INQETPDPECDLDYIPNVARKAELN---VVMSNSFGFGGTNGVV 401

Length = 406

>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II

 Score =  124 bits (313), Expect = 1e-31
 Identities = 66/153 (43%), Positives = 89/153 (58%), Gaps = 9/153 (5%)

Query: 210 DGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPA 269
           D +H+T P  +G G +L + +AL  + +S  D++YINAHATST  GD+ E +A+   F  
Sbjct: 393 DAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYINAHATSTKAGDLKEYQALMRCFGQ 452

Query: 270 Q-RLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVT 328
              L V+STK   GHLLGAAG +E+  T+ A+  G V PN+NLE+P          T V 
Sbjct: 453 NPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVD-----TKVL 507

Query: 329 EWKTDGR---RVALKNSFGFGGTNACLCIAEYK 358
                 R   +VAL NSFGFGG N+ +  A YK
Sbjct: 508 VGPKKERLDIKVALSNSFGFGGHNSSILFAPYK 540

Length = 540

>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

 Score =  121 bits (304), Expect = 1e-31
 Identities = 68/135 (50%), Positives = 86/135 (63%), Gaps = 2/135 (1%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIA 68
           LSP+ V  F  N+  AG +SI    K         C  G  AIGDA R+I+   ADV + 
Sbjct: 57  LSPFTVPSFLVNLA-AGHVSIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALC 115

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G AE+ I  +S+A F   RAL+T FN+ P +ASRPFD  RDGFVMGEG+ +L++EEL+HA
Sbjct: 116 GGAEAVIDTVSLAGFAAARALSTHFNSTPEKASRPFDTARDGFVMGEGAGLLIIEELEHA 175

Query: 129 LARSANIYAEIIGYG 143
           LAR A   AEI+GYG
Sbjct: 176 LARGAKPLAEIVGYG 190

Length = 342

>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

 Score =  120 bits (304), Expect = 9e-31
 Identities = 58/155 (37%), Positives = 77/155 (49%), Gaps = 14/155 (9%)

Query: 210 DGH--HLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLF 267
           DG    +T+P   G      + RA   A + P DI Y+ AH T TPLGD IE++A+  +F
Sbjct: 267 DGRTKGITAP--SGEAQAALIRRAYARAGVDPSDIDYVEAHGTGTPLGDPIEVEALAKVF 324

Query: 268 PA-----QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCE----EA 318
                  Q L++ S K   GHL  AAG       +LA+  G++PPN++ E P      E 
Sbjct: 325 GGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEE 384

Query: 319 GGYECPTAVTEWK-TDGRRVALKNSFGFGGTNACL 352
                PT    W    G R A  +SFGFGGTNA +
Sbjct: 385 SPLRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHV 419

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421

>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

 Score =  122 bits (309), Expect = 1e-30
 Identities = 91/314 (28%), Positives = 124/314 (39%), Gaps = 80/314 (25%)

Query: 54  AFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVM 113
           A + ++ G  D+ +AG     +S  S   F     L+      P    + FD   DG+V 
Sbjct: 184 ACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLS------PDGRCKAFDADADGYVR 237

Query: 114 GEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRIL 173
           GEG+ ++VL+ L  A      IYA I G          S+ N   G  N L+        
Sbjct: 238 GEGAGVVVLKRLSDAERDGDRIYAVIRG----------SAVNQD-GRSNGLTA------- 279

Query: 174 PNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALI 233
           PN+ A    I                                               AL 
Sbjct: 280 PNLEAQADVIR---------------------------------------------EALA 294

Query: 234 DANLSPGDISYINAHATSTPLGDVIELKAIGSLF----PAQRLMVSSTKGAHGHLLGAAG 289
           DA + P  + Y+ AH T TPLGD IE  A+G+++    PAQ   + S K   GHL  AAG
Sbjct: 295 DAGIDPATVQYVEAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAG 354

Query: 290 NLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP----TAVTEWKTDG--RRVALKNSF 343
                 T LA+  G +PP ++ + P  E      P    T  T W T G  RR  + +SF
Sbjct: 355 IAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWPTGGGPRRAGV-SSF 413

Query: 344 GFGGTNACLCIAEY 357
           GFGGTNA + + E 
Sbjct: 414 GFGGTNAHVILEEA 427

Length = 1061

>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

 Score =  117 bits (293), Expect = 5e-30
 Identities = 68/153 (44%), Positives = 92/153 (60%), Gaps = 3/153 (1%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G S D +H+TS  EDG GA  AM  AL  A ++P  + ++NAHATSTP+GD+ E+ AI  
Sbjct: 190 GTSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQVQHLNAHATSTPVGDLGEINAIKH 249

Query: 266 LF-PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP 324
           LF  +  L ++STK A GHLLGAAG LE+ FT+LA+ + +VP  +NLE+P   A G    
Sbjct: 250 LFGESNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGLNII 309

Query: 325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
               +        AL N FGF G NA + +  +
Sbjct: 310 AGNAQ--PHDMTYALSNGFGFAGVNASILLKRW 340

Length = 342

>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score =  111 bits (280), Expect = 1e-27
 Identities = 46/95 (48%), Positives = 64/95 (67%), Gaps = 1/95 (1%)

Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A   IQ G  D++ AG  E    ++S   F  + AL+T++N+ P +ASR +D  R
Sbjct: 167 HCIGNAVEQIQLGKQDIVFAGGGEELDWEMS-CLFDAMGALSTKYNDTPEKASRAYDANR 225

Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G  ++V+EEL+HALAR A IYAEI+GYG
Sbjct: 226 DGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYG 260

Length = 406

>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  110 bits (277), Expect = 3e-27
 Identities = 57/136 (41%), Positives = 80/136 (58%), Gaps = 2/136 (1%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           +SP  V  + PN  PA A+ ++  +K   +     C  G  AI  A+R I  G AD+ I 
Sbjct: 137 VSPLAVQMYMPNG-PAAAVGLERHAKAGVITPVSACASGSEAIAQAWRQIVLGEADIAIC 195

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  E+ I  + IA F ++R + +  N++PA A RPFDK RDGFV GEG A++V+E  +HA
Sbjct: 196 GGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDKDRDGFVFGEGGALMVIETEEHA 255

Query: 129 LARSANIYAEIIGYGM 144
            AR ANI A I+G  +
Sbjct: 256 KARGANILARIMGASI 271

Length = 418

>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score =  109 bits (274), Expect = 1e-26
 Identities = 66/169 (39%), Positives = 89/169 (52%), Gaps = 15/169 (8%)

Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GA         G + DG+ + +P   G GA+  M  AL   +     I YIN H T
Sbjct: 245 ALARGAKIYAEIVGYGATSDGYDMVAP--SGEGAVRCMQMALATVD---TPIDYINTHGT 299

Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F  +   +S+TK   GH LGAAG  E+ +++L +  G + P+ N
Sbjct: 300 STPVGDVKELGAIREVFGDKSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSAN 359

Query: 311 LEDPCEEAGGYECPTAVTEWKTDGR-RVALKNSFGFGGTNACLCIAEYK 358
           +E+   +A G   P  VTE   +      + NSFGFGGTNA L    YK
Sbjct: 360 IEELDPQAAG--MPI-VTETTDNAELTTVMSNSFGFGGTNATLVFRRYK 405

Length = 406

>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

 Score =  109 bits (273), Expect = 1e-26
 Identities = 87/337 (25%), Positives = 122/337 (36%), Gaps = 72/337 (21%)

Query: 20  PNMVPAGAISIDMDSK---VQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIAGAAESCIS 76
           PN   AG ++I + S    ++T    C      A+  A   I+ G AD+++ G  E    
Sbjct: 137 PNT-VAGWVNILLLSSHGPIKTPVGACAT-ALEALDLAVEAIRSGKADIVVVGGVED-PL 193

Query: 77  QLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIY 136
           +  ++ F  + AL+T    EP + SRPFD+ RDGFV  EG+ +LVLE  + ALAR A IY
Sbjct: 194 EEGLSGFANMGALSTA-EEEPEEMSRPFDETRDGFVEAEGAGVLVLERAELALARGAPIY 252

Query: 137 AEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVST 196
             + G                                    AG                 
Sbjct: 253 GRVAGTAS-----------------------------TTDGAG------RSVPAGGKGIA 277

Query: 197 ACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT-STPLG 255
                A A         L      G            D   S        A A  +  LG
Sbjct: 278 RAIRTALAKAGLSLD-DLDVISAHGTS------TPANDVAES-------RAIAEVAGALG 323

Query: 256 DVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPC 315
             + + A  +LF              GH  GAAG L+    + ++  GL+PP  NL+D  
Sbjct: 324 APLPVTAQKALF--------------GHSKGAAGALQLIGALQSLEHGLIPPTANLDDVD 369

Query: 316 EEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACL 352
            +           +      R AL N+FGFGG+NA L
Sbjct: 370 PDVEHLSVVGLSRDLNLKV-RAALVNAFGFGGSNAAL 405

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues. Length = 407

>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score =  109 bits (274), Expect = 1e-26
 Identities = 64/175 (36%), Positives = 84/175 (48%), Gaps = 21/175 (12%)

Query: 197 ACATGAHAIGM------SGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GA  +G+        D  H T    DG  A+ A+  AL DA L+P  I YINAH T
Sbjct: 258 AVARGAKILGIVAGCGEKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHGT 317

Query: 251 STPLGDVIELKAIGSLF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPN 308
           STP  D +E   + ++F      + VSS K   GH L AAG +E+ F++L +  G +PP 
Sbjct: 318 STPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPT 377

Query: 309 VNLEDPCEEAGGYECPT----AVTEWKTDGR-RVALKNSFGFGGTNACLCIAEYK 358
           +N ++P         P      V     D R    L NSFGFGG NA L +    
Sbjct: 378 INYDNP--------DPAIPLDVVPNVARDARVTAVLSNSFGFGGQNASLVLTAEP 424

Length = 425

>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

 Score =  107 bits (269), Expect = 4e-26
 Identities = 52/150 (34%), Positives = 73/150 (48%), Gaps = 7/150 (4%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
            M  D +    P     G +  +  AL  A L P DI Y+N H T +PLGD  EL A+ +
Sbjct: 267 SMRLDANRGPDP--SLEGEMRVIRAALRRAGLGPEDIDYVNPHGTGSPLGDETELAALFA 324

Query: 266 LFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
                   +++TK   GH L AAG +E   T+L +  G + P+ NL++P +E   +   T
Sbjct: 325 SG-LAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERFRWVGST 383

Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
           A +       R AL  SFGFGG N  L + 
Sbjct: 384 AESA----RIRYALSLSFGFGGINTALVLE 409

Length = 410

>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II

 Score =  100 bits (249), Expect = 4e-23
 Identities = 44/84 (52%), Positives = 60/84 (71%), Gaps = 1/84 (1%)

Query: 58  IQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGS 117
           I  G ADVM+ G +++ I  + +  F   RAL +Q N++P +ASRP+D  RDGFVMGEG+
Sbjct: 305 IIRGEADVMLCGGSDAAIIPIGLGGFVACRAL-SQRNDDPTKASRPWDMNRDGFVMGEGA 363

Query: 118 AILVLEELDHALARSANIYAEIIG 141
            +L+LEEL+HA  R ANIYAE +G
Sbjct: 364 GVLLLEELEHAKKRGANIYAEFLG 387

Length = 540

>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain

 Score = 93.1 bits (232), Expect = 5e-22
 Identities = 38/126 (30%), Positives = 58/126 (46%), Gaps = 7/126 (5%)

Query: 4   RGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGHAIGD-AFRLIQGGH 62
            G    +SPY    + P++  AG IS  +  +  ++ V   C         A R I+ G 
Sbjct: 124 AGGPRRVSPYLTGAWMPSVA-AGRISYRLGLRGPSVTVDTACSSSLVALHAAVRSIRRGE 182

Query: 63  ADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVL 122
            D+ +AG  E+ ++    A F    AL +   + P +A  PF    DGFV GEG   ++L
Sbjct: 183 CDLALAGGVEAPLTPGGFAGFSAAGALLS--PDGPCKAFDPFA---DGFVRGEGVGAVLL 237

Query: 123 EELDHA 128
           +EL  A
Sbjct: 238 KELSEA 243

The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243

>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

 Score = 93.9 bits (233), Expect = 1e-21
 Identities = 55/152 (36%), Positives = 73/152 (48%), Gaps = 7/152 (4%)

Query: 201 GAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIEL 260
              A  + G G  + +      G   A   AL  A L+  DI Y+ AH T TP+GDV EL
Sbjct: 186 VGTAATIDGAG--MGAFAPSAEGLARAAKEALAVAGLTVWDIDYLVAHGTGTPIGDVKEL 243

Query: 261 KAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGG 320
           K + S F  +   VS+TK   G+L  AA  L     +L +  G +PP++++E+  E    
Sbjct: 244 KLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDEAG-- 301

Query: 321 YECPTAVTEWKTDGRRVALKNSFGFGGTNACL 352
                 VTE      R AL N FG GGTNA L
Sbjct: 302 ---LNIVTETTPRELRTALLNGFGLGGTNATL 330

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332

>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase

 Score = 90.6 bits (225), Expect = 4e-20
 Identities = 36/68 (52%), Positives = 49/68 (72%), Gaps = 1/68 (1%)

Query: 140 IGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTAC 198
           IG G+  ++D+L +   + +    +LSP+FV RIL NM+AG +SI +GFQGPNH   TAC
Sbjct: 125 IGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYGFQGPNHAAVTAC 184

Query: 199 ATGAHAIG 206
           ATGAH+IG
Sbjct: 185 ATGAHSIG 192

Length = 437

>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

 Score = 85.1 bits (211), Expect = 3e-18
 Identities = 38/99 (38%), Positives = 53/99 (53%), Gaps = 1/99 (1%)

Query: 47  GGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQ-FNNEPAQASRPFD 105
           G  A+  A RL+Q G  D  IA  A   +S     A   + A+ +  F +EP  A RPFD
Sbjct: 170 GQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSLGAMGSDRFADEPEAACRPFD 229

Query: 106 KRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGM 144
           + RDGF+ GE    +VLE  + A  R A  YA+++G+ M
Sbjct: 230 QDRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWSM 268

Length = 410

>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II

 Score = 82.9 bits (206), Expect = 1e-17
 Identities = 33/71 (46%), Positives = 46/71 (64%), Gaps = 1/71 (1%)

Query: 139 IIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTA 197
           IIG G+  L  +   +  L +    ++SP+F+   + NM+AGQISI +G +GPNH V TA
Sbjct: 101 IIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTA 160

Query: 198 CATGAHAIGMS 208
           CATG HAIG +
Sbjct: 161 CATGTHAIGDA 171

3-oxoacyl-[acyl-carrier-protein] synthase 2 (KAS-II, FabF) is involved in the condensation step of fatty acid biosynthesis in which the malonyl donor group is decarboxylated and the resulting carbanion used to attack and extend the acyl group attached to the acyl carrier protein. Most genomes encoding fatty acid biosynthesis contain a number of condensing enzymes, often of all three types: 1, 2 and 3. Synthase 2 is mechanistically related to synthase 1 (KAS-I, FabB) containing a number of absolutely conserved catalytic residues in common. This model is based primarily on genes which are found in apparent operons with other essential genes of fatty acid biosynthesis (GenProp0681). The large gap between the trusted cutoff and the noise cutoff contains many genes which are not found adjacent to genes of the fatty acid pathway in genomes that often also contain a better hit to this model. These genes may be involved in other processes such as polyketide biosyntheses. Some genomes contain more than one above-trusted hit to this model which may result from recent paralogous expansions. Second hits to this model which are not next to other fatty acid biosynthesis genes may be involved in other processes. FabB sequences should fall well below the noise cutoff of this model [Fatty acid and phospholipid metabolism, Biosynthesis]. Length = 407

>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 82.9 bits (206), Expect = 1e-17
 Identities = 27/51 (52%), Positives = 37/51 (72%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM 207
           L+    ++SP+FV   + NM+AG +SI +G +GPNH + TACATGAHAIG 
Sbjct: 121 LEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGD 171

Length = 411

>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional

 Score = 80.9 bits (200), Expect = 7e-17
 Identities = 30/69 (43%), Positives = 45/69 (65%), Gaps = 1/69 (1%)

Query: 139 IIGYGMIDLSDVLSSNNALQG-SYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTA 197
            IG G+  L+D+      L    ++++SPYF+ +IL NM+AG ++I+H  +GP+    TA
Sbjct: 108 NIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTA 167

Query: 198 CATGAHAIG 206
           CATGAH IG
Sbjct: 168 CATGAHCIG 176

Length = 421

>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 80.1 bits (198), Expect = 1e-16
 Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 2/106 (1%)

Query: 38  TLCVYCLCYGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEP 97
           +L   C   G  AI      I+ G  D  +  A +  +S  ++  F  + AL+TQ N+ P
Sbjct: 170 SLSTAC-ASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSALSTQ-NDPP 227

Query: 98  AQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
            +AS+PF K RDGFVM EG+  LVLE L+ A+AR A I   + G G
Sbjct: 228 EKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCG 273

Length = 425

>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

 Score = 79.5 bits (197), Expect = 2e-16
 Identities = 34/70 (48%), Positives = 49/70 (70%), Gaps = 1/70 (1%)

Query: 139 IIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTA 197
           +IG G+  L+ +  +  AL +    ++SP+FV   LPNM+AGQ++I  G +GPN+ VSTA
Sbjct: 101 VIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTA 160

Query: 198 CATGAHAIGM 207
           CA+GAHAIG 
Sbjct: 161 CASGAHAIGD 170

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. Length = 406

>gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

 Score = 75.5 bits (186), Expect = 4e-15
 Identities = 35/94 (37%), Positives = 52/94 (55%), Gaps = 3/94 (3%)

Query: 50  AIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRD 109
           A+  A RL++ G   ++++G  +S +      A      L+T  +++PA+A  PFD    
Sbjct: 167 ALAQARRLVRRG-TPLVVSGGVDSALCPWGWVAQLSSGRLST--SDDPARAYLPFDAAAA 223

Query: 110 GFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           G+V GEG AILVLE+   A  R A +Y EI GY 
Sbjct: 224 GYVPGEGGAILVLEDAAAARERGARVYGEIAGYA 257

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399

>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

 Score = 73.4 bits (180), Expect = 2e-14
 Identities = 43/120 (35%), Positives = 61/120 (50%), Gaps = 7/120 (5%)

Query: 25  AGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAF 83
           +G I+  +        V   C G  HA+  A   +Q G  D+++AG +E   + +     
Sbjct: 76  SGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFD 135

Query: 84  CRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
                        P +ASR FD   DGFV G+G+  LV+EEL+HALAR A+IYAEI+G  
Sbjct: 136 AMGALS------TPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTA 189

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332

>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA

 Score = 74.7 bits (183), Expect = 2e-14
 Identities = 55/169 (32%), Positives = 79/169 (46%), Gaps = 18/169 (10%)

Query: 205 IGMSGDGH--HLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKA 262
           +G S DG    + +PR +G+    A+ RA  DA  +P     I AH T T  GDV E   
Sbjct: 298 VGASSDGKFKSIYAPRPEGQAK--ALKRAYDDAGFAPHTCGLIEAHGTGTAAGDVAEFGG 355

Query: 263 IGSLFPA-----QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEE 317
           + S+F       Q + + S K   GH    AG       +LA+H  ++PP +N++ P  +
Sbjct: 356 LVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPK 415

Query: 318 AGGYECP----TAVTEW--KTDG--RRVALKNSFGFGGTNACLCIAEYK 358
                 P    T    W  + DG  RR  + +SFGFGGTN  + + EY 
Sbjct: 416 LDIENSPFYLNTETRPWMQREDGTPRRAGI-SSFGFGGTNFHMVLEEYS 463

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. Length = 2582

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score = 71.7 bits (176), Expect = 2e-14
 Identities = 60/232 (25%), Positives = 80/232 (34%), Gaps = 77/232 (33%)

Query: 177 SAGQISIEHGFQ-GPNHCVSTACATGAHAIGMS----------------------GDG-- 211
           +AGQ++   G   GP + V+ ACATG  A+ ++                      GDG  
Sbjct: 46  AAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEEFVFGDGAA 105

Query: 212 -----------------------HHLTS------PREDGRGALLAMTRALIDANLSPGDI 242
                                     T       P   G G   A  +AL  A L+P DI
Sbjct: 106 AAVVESEEHALRRGAHPQAEIVSTAATFDGASMVPAVSGEGLARAARKALEGAGLTPSDI 165

Query: 243 SYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHE 302
            Y+ AH T TP+GD +EL         +   VS+T    GH LGAAG       +L +  
Sbjct: 166 DYVEAHGTGTPIGDAVELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEH 225

Query: 303 GLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCI 354
             +PP                            R  L   FG GGTNA + +
Sbjct: 226 EFIPP-----------------------TPREPRTVLLLGFGLGGTNAAVVL 254

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

 Score = 70.8 bits (174), Expect = 2e-13
 Identities = 32/71 (45%), Positives = 47/71 (66%), Gaps = 2/71 (2%)

Query: 139 IIGYGMIDLSDVLSSNNAL--QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVST 196
            IG G+  L D+    +AL  +G   ++SP+ V ++LPN++AG ++I  G +GPN+   T
Sbjct: 101 AIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVT 160

Query: 197 ACATGAHAIGM 207
           ACATGAHAIG 
Sbjct: 161 ACATGAHAIGD 171

Length = 412

>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 67.3 bits (165), Expect = 2e-12
 Identities = 22/44 (50%), Positives = 29/44 (65%)

Query: 163 KLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
           +LSP+ +   L NM+AG +SI +GF+GP     TACA G  AIG
Sbjct: 138 RLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIG 181

Length = 424

>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

 Score = 63.3 bits (155), Expect = 5e-11
 Identities = 28/90 (31%), Positives = 40/90 (44%), Gaps = 6/90 (6%)

Query: 54  AFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVM 113
           A + ++ G  D+ + G     +S      F +   L+      P    RPFD   DG+V 
Sbjct: 180 ACQSLRSGECDLALVGGVNLILSPDMFVGFSKAGMLS------PDGRCRPFDADADGYVR 233

Query: 114 GEGSAILVLEELDHALARSANIYAEIIGYG 143
           GEG  ++VL+ L  AL     IYA I G  
Sbjct: 234 GEGVGVVVLKRLSDALRDGDRIYAVIRGSA 263

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits. Length = 421

>gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

 Score = 62.4 bits (152), Expect = 8e-11
 Identities = 43/147 (29%), Positives = 65/147 (44%), Gaps = 5/147 (3%)

Query: 208 SGDGHHLTSPREDGRGALL--AMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           +G       P   GR   L  A+  AL DA L+P D+  + A A   P  D  E  A+ +
Sbjct: 254 AGYAATFDPPPGSGRPPGLARAIRLALADAGLTPEDVDVVFADAAGVPELDRAEAAALAA 313

Query: 266 LFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
           +F  + + V++ K   G L      L+ A  +LA+ +G++PP VN+ D       Y    
Sbjct: 314 VFGPRGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDV---PPAYGLDL 370

Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACL 352
                +    R AL  + G GG N+ L
Sbjct: 371 VTGRPRPAALRTALVLARGRGGFNSAL 397

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine. Length = 399

>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain

 Score = 58.8 bits (143), Expect = 4e-10
 Identities = 17/49 (34%), Positives = 29/49 (59%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAI 205
             G   ++SPY     +P+++AG+IS   G +GP+  V TAC++   A+
Sbjct: 123 SAGGPRRVSPYLTGAWMPSVAAGRISYRLGLRGPSVTVDTACSSSLVAL 171

The structure of beta-ketoacyl synthase is similar to that of the thiolase family (pfam00108) and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. The N-terminal domain contains most of the structures involved in dimer formation and also the active site cysteine. Length = 243

>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase

 Score = 59.7 bits (146), Expect = 4e-10
 Identities = 38/96 (39%), Positives = 51/96 (53%), Gaps = 10/96 (10%)

Query: 268 PAQRLMVSSTKGAHGHLLGAAGNLESAF--TILAVHEGLVPPNVNLEDP----CEEAGGY 321
           PAQ L++ S K   GHL  AAG   +     +LA+  G++PP ++ E P      E    
Sbjct: 206 PAQ-LLIGSVKSNIGHLEAAAGV--AGLIKVVLALKHGVIPPTLHFETPNPHIDLEESPL 262

Query: 322 ECPTAVTEWKTDGR-RVALKNSFGFGGTNACLCIAE 356
             PT +T W   GR R A  +SFGFGGTNA + + E
Sbjct: 263 RVPTELTPWPPPGRPRRAGVSSFGFGGTNAHVILEE 298

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298

>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 57.4 bits (139), Expect = 3e-09
 Identities = 25/44 (56%), Positives = 29/44 (65%)

Query: 163 KLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
           K+SP+F+   L NM  G ISIEHG +GPN    TACA G HAI 
Sbjct: 127 KISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAII 170

Length = 406

>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase

 Score = 56.6 bits (138), Expect = 4e-09
 Identities = 26/88 (29%), Positives = 39/88 (44%), Gaps = 6/88 (6%)

Query: 54  AFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVM 113
           A + ++ G  D+ +AG     +S  +     R   L+      P    + FD   DG+V 
Sbjct: 107 ACQSLRSGECDMALAGGVNLILSPDTFVGLSRAGMLS------PDGRCKTFDASADGYVR 160

Query: 114 GEGSAILVLEELDHALARSANIYAEIIG 141
           GEG  ++VL+ L  AL     I A I G
Sbjct: 161 GEGVGVVVLKRLSDALRDGDPILAVIRG 188

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains. Length = 298

>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 56.2 bits (135), Expect = 9e-09
 Identities = 30/68 (44%), Positives = 41/68 (60%), Gaps = 1/68 (1%)

Query: 140 IGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTAC 198
           IG G+  L  + + + AL +    K+SP+FV   + NM AG +SI  G +GPN  +STAC
Sbjct: 105 IGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTAC 164

Query: 199 ATGAHAIG 206
            TG H IG
Sbjct: 165 TTGLHNIG 172

Length = 414

>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

 Score = 46.3 bits (109), Expect = 1e-05
 Identities = 22/44 (50%), Positives = 29/44 (65%)

Query: 163 KLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
           +LSP+ V   L N++AG +SI+H F+GP     TACA G  AIG
Sbjct: 56  RLSPFTVPSFLVNLAAGHVSIKHHFKGPIGAPVTACAAGVQAIG 99

Length = 342

>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II

 Score = 45.0 bits (106), Expect = 4e-05
 Identities = 20/50 (40%), Positives = 32/50 (64%)

Query: 156 ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAI 205
           AL+ SY K++P+ V     NM +  ++++ G+ GPN+ +STACAT    I
Sbjct: 249 ALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCI 298

Length = 540

>gnl|CDD|235819 PRK06519, PRK06519, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

 Score = 41.9 bits (99), Expect = 3e-04
 Identities = 29/90 (32%), Positives = 38/90 (42%), Gaps = 3/90 (3%)

Query: 50  AIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRD 109
           AI  AF  I  G +D  + G A +      +  +     L       P  +    D    
Sbjct: 181 AIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELGGLLLKG-GWAPVWSRGGEDG--G 237

Query: 110 GFVMGEGSAILVLEELDHALARSANIYAEI 139
           GF++G G A LVLE  +HA AR A  YA I
Sbjct: 238 GFILGSGGAFLVLESREHAEARGARPYARI 267

Length = 398

>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

 Score = 40.5 bits (95), Expect = 7e-04
 Identities = 24/97 (24%), Positives = 37/97 (38%), Gaps = 37/97 (38%)

Query: 47  GGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDK 106
           G  A+  A + +Q G AD+++AG +E                                  
Sbjct: 71  GLTALALAVQQVQNGKADIVLAGGSEEF-------------------------------- 98

Query: 107 RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
                V G+G+A  V+E  +HAL R A+  AEI+   
Sbjct: 99  -----VFGDGAAAAVVESEEHALRRGAHPQAEIVSTA 130

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products. Length = 254

>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

 Score = 40.6 bits (96), Expect = 9e-04
 Identities = 27/82 (32%), Positives = 41/82 (50%), Gaps = 9/82 (10%)

Query: 50  AIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRD 109
               A RL++ G  D  I G  +S + +L++  F  + +L+        Q  RPF   RD
Sbjct: 166 VFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESLS-------PQPCRPFSANRD 217

Query: 110 GFVMGEGSAILVLE-ELDHALA 130
           G  +GE +A  +LE E D A+A
Sbjct: 218 GINIGEAAAFFLLEREDDAAVA 239

Length = 392

>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

 Score = 39.5 bits (92), Expect = 0.002
 Identities = 18/45 (40%), Positives = 27/45 (60%)

Query: 166 PYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGD 210
           PY VT+ +   ++GQI+   G  GP + VS ACA   HA+ ++ D
Sbjct: 64  PYVVTKAMFPGASGQIATPLGIHGPAYDVSAACAGSLHALSLAAD 108

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units). Length = 332

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	359
KOG1394|consensus	440		100.0
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	100.0
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	100.0
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	100.0
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	100.0
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	100.0
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	100.0
cd00832	399	CLF Chain-length factor (CLF) is a factor required	100.0
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
TIGR02813	2582	omega_3_PfaA polyketide-type polyunsaturated fatty	100.0
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	100.0
PRK06501	425	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
COG3321	1061	Polyketide synthase modules and related proteins [	100.0
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	100.0
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	100.0
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	100.0
smart00825	424	PKS_KS Beta-ketoacyl synthase. The structure of be	100.0
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	100.0
cd00833	421	PKS polyketide synthases (PKSs) polymerize simple	100.0
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	100.0
KOG1202|consensus	2376		100.0
cd00825	332	decarbox_cond_enzymes decarboxylating condensing e	100.0
PRK06147	348	3-oxoacyl-(acyl carrier protein) synthase; Validat	99.97
cd00327	254	cond_enzymes Condensing enzymes; Family of enzymes	99.93
PRK06064	389	acetyl-CoA acetyltransferase; Provisional	99.91
PRK05656	393	acetyl-CoA acetyltransferase; Provisional	99.9
PRK12578	385	acetyl-CoA acetyltransferase; Provisional	99.89
PRK13359	400	beta-ketoadipyl CoA thiolase; Provisional	99.88
PRK07516	389	acetyl-CoA acetyltransferase; Provisional	99.88
KOG1406|consensus	408		99.87
PRK06633	392	acetyl-CoA acetyltransferase; Provisional	99.87
PRK08947	387	fadA 3-ketoacyl-CoA thiolase; Reviewed	99.87
PRK07661	391	acetyl-CoA acetyltransferase; Provisional	99.87
PRK08242	402	acetyl-CoA acetyltransferase; Validated	99.87
TIGR02445	385	fadA fatty oxidation complex, beta subunit FadA. T	99.87
PRK09051	394	beta-ketothiolase; Provisional	99.87
TIGR02430	400	pcaF beta-ketoadipyl CoA thiolase. Members of this	99.87
cd00751	386	thiolase Thiolase are ubiquitous enzymes that cata	99.87
PLN02287	452	3-ketoacyl-CoA thiolase	99.87
PRK07108	392	acetyl-CoA acetyltransferase; Provisional	99.86
PRK09050	401	beta-ketoadipyl CoA thiolase; Validated	99.86
PRK08131	401	acetyl-CoA acetyltransferase; Provisional	99.86
PRK06158	384	thiolase; Provisional	99.86
PTZ00455	438	3-ketoacyl-CoA thiolase; Provisional	99.85
PF02801	119	Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina	99.85
PRK09052	399	acetyl-CoA acetyltransferase; Provisional	99.85
PRK06365	430	acetyl-CoA acetyltransferase; Provisional	99.85
PRK07850	387	acetyl-CoA acetyltransferase; Provisional	99.85
cd00829	375	SCP-x_thiolase Thiolase domain associated with ste	99.85
PRK06059	399	lipid-transfer protein; Provisional	99.85
PRK07851	406	acetyl-CoA acetyltransferase; Provisional	99.85
PRK06954	397	acetyl-CoA acetyltransferase; Provisional	99.85
PRK05790	393	putative acyltransferase; Provisional	99.85
PLN02644	394	acetyl-CoA C-acetyltransferase	99.85
PRK06065	392	acetyl-CoA acetyltransferase; Provisional	99.85
PRK06445	394	acetyl-CoA acetyltransferase; Provisional	99.84
TIGR01930	386	AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi	99.84
PRK08142	388	acetyl-CoA acetyltransferase; Provisional	99.84
PRK08256	391	lipid-transfer protein; Provisional	99.84
PRK08313	386	acetyl-CoA acetyltransferase; Provisional	99.84
PRK08235	393	acetyl-CoA acetyltransferase; Provisional	99.84
PRK06205	404	acetyl-CoA acetyltransferase; Provisional	99.84
PRK06025	417	acetyl-CoA acetyltransferase; Provisional	99.83
PRK08963	428	fadI 3-ketoacyl-CoA thiolase; Reviewed	99.83
PRK06157	398	acetyl-CoA acetyltransferase; Validated	99.83
PRK06366	388	acetyl-CoA acetyltransferase; Provisional	99.82
PRK06690	361	acetyl-CoA acetyltransferase; Provisional	99.82
PRK06289	403	acetyl-CoA acetyltransferase; Provisional	99.82
cd00826	393	nondecarbox_cond_enzymes nondecarboxylating conden	99.82
PRK06066	385	acetyl-CoA acetyltransferase; Provisional	99.82
PRK06504	390	acetyl-CoA acetyltransferase; Provisional	99.81
PRK07801	382	acetyl-CoA acetyltransferase; Provisional	99.81
PF00109	254	ketoacyl-synt: Beta-ketoacyl synthase, N-terminal	99.8
PRK08170	426	acetyl-CoA acetyltransferase; Provisional	99.79
TIGR02446	430	FadI fatty oxidation complex, beta subunit FadI. T	99.79
PRK09268	427	acetyl-CoA acetyltransferase; Provisional	99.77
KOG1390|consensus	396		99.76
KOG1389|consensus	435		99.68
PRK07855	386	lipid-transfer protein; Provisional	99.65
KOG1391|consensus	396		99.63
COG0183	392	PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis	99.63
PRK08257	498	acetyl-CoA acetyltransferase; Validated	99.59
PRK07937	352	lipid-transfer protein; Provisional	99.59
PRK07515	372	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.5
KOG1392|consensus	465		99.39
PRK07204	329	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.36
PRK09352	319	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.34
PF02803	123	Thiolase_C: Thiolase, C-terminal domain; InterPro:	99.34
COG0332	323	FabH 3-oxoacyl-[acyl-carrier-protein]	99.3
TIGR00747	318	fabH 3-oxoacyl-(acyl-carrier-protein) synthase III	99.25
PRK06816	378	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.23
PRK12879	325	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.23
cd00830	320	KAS_III Ketoacyl-acyl carrier protein synthase III	99.14
PRK09258	338	3-oxoacyl-(acyl carrier protein) synthase III; Rev	99.14
CHL00203	326	fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr	99.08
PLN02326	379	3-oxoacyl-[acyl-carrier-protein] synthase III	99.02
PRK06840	339	hypothetical protein; Validated	98.91
TIGR02845	327	spore_V_AD stage V sporulation protein AD. Bacillu	98.87
TIGR00748	345	HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase	98.83
cd00827	324	init_cond_enzymes "initiating" condensing enzymes	98.81
PRK04262	347	hypothetical protein; Provisional	98.77
KOG1394|consensus	440		98.76
PRK05963	326	3-oxoacyl-(acyl carrier protein) synthase II; Revi	98.75
PRK12880	353	3-oxoacyl-(acyl carrier protein) synthase III; Rev	98.62
PRK08304	337	stage V sporulation protein AD; Validated	98.59
PLN03172	393	chalcone synthase family protein; Provisional	98.52
cd00831	361	CHS_like Chalcone and stilbene synthases; plant-sp	98.52
TIGR01835	379	HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt	98.46
PLN03170	401	chalcone synthase; Provisional	98.41
PLN02854	521	3-ketoacyl-CoA synthase	98.4
PLN03169	391	chalcone synthase family protein; Provisional	98.35
PF00108	264	Thiolase_N: Thiolase, N-terminal domain; InterPro:	98.35
PLN03171	399	chalcone synthase-like protein; Provisional	98.35
PRK12404	334	stage V sporulation protein AD; Provisional	98.31
PLN03173	391	chalcone synthase; Provisional	98.31
COG3425	377	PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi	98.3
PLN03168	389	chalcone synthase; Provisional	98.22
PLN02377	502	3-ketoacyl-CoA synthase	98.01
PLN02577	459	hydroxymethylglutaryl-CoA synthase	97.84
PF08545	80	ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)	97.78
COG0304	412	FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li	97.64
TIGR01833	454	HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth	97.63
PF13723	218	Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina	97.57
PLN02932	478	3-ketoacyl-CoA synthase	97.45
PLN02192	511	3-ketoacyl-CoA synthase	97.33
PRK14691	342	3-oxoacyl-(acyl carrier protein) synthase II; Prov	97.23
PLN00415	466	3-ketoacyl-CoA synthase	96.56
PF07451	329	SpoVAD: Stage V sporulation protein AD (SpoVAD); I	96.4
PLN02787	540	3-oxoacyl-[acyl-carrier-protein] synthase II	96.3
PF08541	90	ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC	96.2
PRK06519	398	3-oxoacyl-(acyl carrier protein) synthase II; Revi	96.18
PRK08722	414	3-oxoacyl-(acyl carrier protein) synthase II; Revi	96.06
PRK09116	405	3-oxoacyl-(acyl carrier protein) synthase II; Revi	96.01
PRK07967	406	3-oxoacyl-(acyl carrier protein) synthase I; Revie	95.99
PLN02836	437	3-oxoacyl-[acyl-carrier-protein] synthase	95.67
PF08392	290	FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-	95.64
PRK07910	418	3-oxoacyl-(acyl carrier protein) synthase II; Revi	95.51
PRK05952	381	3-oxoacyl-(acyl carrier protein) synthase II; Revi	95.3
cd00832	399	CLF Chain-length factor (CLF) is a factor required	95.13
PF01154	174	HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s	95.1
PTZ00050	421	3-oxoacyl-acyl carrier protein synthase; Provision	94.83
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	94.18
PRK07103	410	polyketide beta-ketoacyl:acyl carrier protein synt	94.13
PF00109	254	ketoacyl-synt: Beta-ketoacyl synthase, N-terminal	94.07
PRK06333	424	3-oxoacyl-(acyl carrier protein) synthase II; Revi	94.04
PRK08439	406	3-oxoacyl-(acyl carrier protein) synthase II; Revi	93.86
PRK07314	411	3-oxoacyl-(acyl carrier protein) synthase II; Revi	92.58
PF00195	226	Chal_sti_synt_N: Chalcone and stilbene synthases,	91.78
PRK09185	392	3-oxoacyl-(acyl carrier protein) synthase I; Revie	90.65
TIGR03150	407	fabF beta-ketoacyl-acyl-carrier-protein synthase I	89.49
cd00828	407	elong_cond_enzymes "elongating" condensing enzymes	88.9
cd00834	406	KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP)	88.46
COG3424	356	BcsA Predicted naringenin-chalcone synthase [Secon	86.35

>KOG1394|consensus

Probab=100.00  E-value=3e-60  Score=426.52  Aligned_cols=290  Identities=56%  Similarity=0.892  Sum_probs=278.7

Q ss_pred             cCCCCCCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHH
Q psy5293           3 YRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIA   81 (359)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~   81 (359)
                      ++|. ++|+||+++..+.|| .++++++.+||+||+.+++++| +|..+|..|.+.|+.|++|++|+||+|..+.|..+.
T Consensus       147 ~~g~-rrvsPffVPkil~NM-~ag~vsm~~gl~GpnhsvSTACATg~h~igda~n~Ir~GdaDvmlAGgsE~~I~Plsla  224 (440)
T KOG1394|consen  147 EKGY-RRVSPFFVPKILTNM-AAGYVSMKYGLRGPNHSVSTACATGNHCIGDAFNFIRLGDADVMLAGGSEACINPLSLA  224 (440)
T ss_pred             Hhcc-cccCccccchhhccc-ccchhhhhhcCcCCchhhHhhhhhccchHHHHHHHHHhCccceeeccCcceeecchhhh
Confidence            4567 899999999999999 9999999999999999999999 999999999999999999999999999999999999


Q ss_pred             HHHhhccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccc
Q psy5293          82 AFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSY  161 (359)
Q Consensus        82 ~~~~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~  161 (359)
                      +|.+.++|++. +++|...+||||..|+||++|||++.++||++++|.+||++||++++|++                  
T Consensus       225 GF~r~RALSt~-nd~P~~aSRPfD~~RdGFVmGEGagvlvlEelEHA~~RgA~I~AE~lGyg------------------  285 (440)
T KOG1394|consen  225 GFSRARALSTR-NDNPQKASRPFDKKRDGFVMGEGAGVLVLEELEHAKKRGAPIYAEVLGYG------------------  285 (440)
T ss_pred             hHHHHHHhhhc-CCCccccCCCCccCCCceeeccceeEEehHhHHHHHHcCCceeHHhhcCc------------------
Confidence            99999999987 88899999999999999999999999999999999999999999999998                  


Q ss_pred             cccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCC
Q psy5293         162 NKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGD  241 (359)
Q Consensus       162 ~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~d  241 (359)
                                                                   .++|+++++.|++++.+...+|.++|+++|++|+|
T Consensus       286 ---------------------------------------------ls~Da~HiT~P~~dG~Ga~~am~raL~~Agl~pe~  320 (440)
T KOG1394|consen  286 ---------------------------------------------LSSDAYHITSPDPDGAGAVLAMERALKDAGLSPED  320 (440)
T ss_pred             ---------------------------------------------ccccccccCCCCCCcchHHHHHHHHHHHcCCChhh
Confidence                                                         89999999999999999999999999999999999


Q ss_pred             ccEEEeccCCCCcccHHHHHHHHhhcCCC--CceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC
Q psy5293         242 ISYINAHATSTPLGDVIELKAIGSLFPAQ--RLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG  319 (359)
Q Consensus       242 I~~ie~h~~~t~~~d~~E~~al~~~~~~~--~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~  319 (359)
                      |+||+.|+|+|+.+|..|.+|+..+|+..  ...|++.|+.+||.+||+|..+.+..+++++++.+||++|++.|+|..+
T Consensus       321 i~YvNAHATST~~GD~aE~~Ai~~vf~~~~~~~~vsStKgaiGHLLGAAGavEAi~Tv~ai~~~~lpptlNlen~d~~~d  400 (440)
T KOG1394|consen  321 IDYVNAHATSTPLGDAAEAEAIKRVFGEHNIASKVSSTKGAIGHLLGAAGAVEAIFTVLAINDGVLPPTLNLENPDPGVD  400 (440)
T ss_pred             cCeeecccccCcCchHHHHHHHHHHhccCCcccccccccchhhhhcccccchhhHhhhhhhhcCccCCcccccCCCcccc
Confidence            99999999999999999999999999943  3469999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCccccccc-CCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         320 GYECPTAVTEWKT-DGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       320 ~~~~~~~~~~~~~-~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .++++....+|.. ...|+++.|||||||+|+++++.+|+
T Consensus       401 ~~~~~~~~~~~~~~~~~~valsNSFGFGGtNaSl~fa~~~  440 (440)
T KOG1394|consen  401 LDYVPLKASEKKGGNKVRVALSNSFGFGGTNASLCFAKFK  440 (440)
T ss_pred             ccccccccccccccccceEEEecccccCCcchhheeeecC
Confidence            9999999999887 56899999999999999999999874

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=100.00  E-value=1.9e-56  Score=421.54  Aligned_cols=287  Identities=47%  Similarity=0.732  Sum_probs=266.4

Q ss_pred             CCCCCCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH
Q psy5293           4 RGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA   82 (359)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~   82 (359)
                      ++. +.++|++++.+++|+ ++++|++.||++||+++|+++| ||+.||..|+++|++|++|++||||+|..+++..+..
T Consensus        52 ~~~-~~~~p~~~~~~~~n~-~a~~is~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~ivgg~d~~~~~~~~~~  129 (342)
T PRK14691         52 RGP-KRLSPFTVPSFLVNL-AAGHVSIKHHFKGPIGAPVTACAAGVQAIGDAVRMIRNNEADVALCGGAEAVIDTVSLAG  129 (342)
T ss_pred             cCc-cccChhHHhhhhhhH-HHHHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHH
Confidence            455 789999999999999 9999999999999999999999 9999999999999999999999999999999999999


Q ss_pred             HHhhccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhccccc
Q psy5293          83 FCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYN  162 (359)
Q Consensus        83 ~~~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~  162 (359)
                      |..++.++...+++|.+.|+|||.+++|++++||+++++|++.+.+.++|++++++|+|++                   
T Consensus       130 f~~~~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGAa~lvLes~~~A~~rG~~i~a~I~g~~-------------------  190 (342)
T PRK14691        130 FAAARALSTHFNSTPEKASRPFDTARDGFVMGEGAGLLIIEELEHALARGAKPLAEIVGYG-------------------  190 (342)
T ss_pred             HHHhhhhhcCCCCCCCcCCCCCCCCCCCccccceEEEEEEeeHHHHHhCCCCceEEEEEEE-------------------
Confidence            9999999865556788999999999999999999999999999999999999999999987                   


Q ss_pred             ccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCc
Q psy5293         163 KLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDI  242 (359)
Q Consensus       163 ~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI  242 (359)
                                                                  ...++.+...|.+++.+..++++++|++++++|+||
T Consensus       191 --------------------------------------------~~~d~~~~~~p~p~~~~~~~ai~~AL~~Agl~p~dI  226 (342)
T PRK14691        191 --------------------------------------------TSADAYHMTSGAEDGDGAYRAMKIALRQAGITPEQV  226 (342)
T ss_pred             --------------------------------------------EEcCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence                                                        556666667777888999999999999999999999


Q ss_pred             cEEEeccCCCCcccHHHHHHHHhhcCC-CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-C
Q psy5293         243 SYINAHATSTPLGDVIELKAIGSLFPA-QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG-G  320 (359)
Q Consensus       243 ~~ie~h~~~t~~~d~~E~~al~~~~~~-~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~-~  320 (359)
                      ||+|.|++||+.+|..|..+|..+|+. ..+||++.|+++||+++|+|+++++.++++|++++|||++|+++|+|++. .
T Consensus       227 dyIeaHgtgT~~~D~~E~~Ai~~~fg~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ippt~n~~~~d~~~~~~  306 (342)
T PRK14691        227 QHLNAHATSTPVGDLGEINAIKHLFGESNALAITSTKSATGHLLGAAGGLETIFTVLALRDQIVPATLNLENPDPAAKGL  306 (342)
T ss_pred             CEEEecCCCCcCCCHHHHHHHHHHhCCCCCceEECCcccccCCcchhhHHHHHHHHHHHhCCccCCcCCCCCCCcccccc
Confidence            999999999999999999999999984 46899999999999999999999999999999999999999999999884 6


Q ss_pred             CCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         321 YECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .+++.+.++++   .|++++|+|||||+|+++||++|.
T Consensus       307 ~~v~~~~~~~~---~~~al~nsfgfGG~n~~lvl~~~~  341 (342)
T PRK14691        307 NIIAGNAQPHD---MTYALSNGFGFAGVNASILLKRWV  341 (342)
T ss_pred             CcccCCCccCC---CCEEEEeCccCCCeeEEEEEeecc
Confidence            66766665555   899999999999999999999984

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=2.7e-56  Score=425.64  Aligned_cols=288  Identities=52%  Similarity=0.818  Sum_probs=273.8

Q ss_pred             cCCCCCCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHH
Q psy5293           3 YRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIA   81 (359)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~   81 (359)
                      .++.++.++|++++..++|+ .++++++.+|++||++++.++| ||.+||..|+++|+.|++|++||||+|..+++..+.
T Consensus       121 ~~~~~~~~~p~~~~~~~~~~-~a~~vs~~~g~~G~~~~~~tACatg~~AIg~A~~~I~~G~ad~~iaGG~e~~i~~~~i~  199 (412)
T COG0304         121 LEGLRKRISPFLVPKMLPNL-AAGNVAIVFGLKGPNYTPVTACATGAHAIGDAVRLIRLGKADVVIAGGAEAAITPLGIA  199 (412)
T ss_pred             hcCCccCcCchhhhhhccch-HHHHHHHHhCCCCCcCChhhhHHhHHHHHHHHHHHHHcCCCCEEEEcccccccCHHHHH
Confidence            45664569999999999999 9999999999999999999999 999999999999999999999999999999999999


Q ss_pred             HHHhhccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccc
Q psy5293          82 AFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSY  161 (359)
Q Consensus        82 ~~~~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~  161 (359)
                      .|..++++++. +++|...+||||.+|+||++|||+++++||+.++|.+||++||++|.|++                  
T Consensus       200 gF~am~Alst~-nd~p~~asrPfd~~RdGfv~gEGag~lVLE~~ehA~aRGA~Iyaei~G~g------------------  260 (412)
T COG0304         200 GFEAMRALSTR-NDDPEKASRPFDKNRDGFVIGEGAGALVLEELEHALARGAKIYAEIVGYG------------------  260 (412)
T ss_pred             HHHHHHHhccC-CCCccccCCCCCCCCCCEEEecceeEEEecChhhHHhCCCceEEEEEEEE------------------
Confidence            99999999987 88999999999999999999999999999999999999999999999998                  


Q ss_pred             cccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCC
Q psy5293         162 NKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGD  241 (359)
Q Consensus       162 ~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~d  241 (359)
                                                                   .+.|+++.+.|.+.+.+..++|+.+|++++++|+|
T Consensus       261 ---------------------------------------------~~~Da~h~t~P~p~g~Ga~~am~~AL~~Agl~~~~  295 (412)
T COG0304         261 ---------------------------------------------TTSDAYHITAPAPDGEGAIRAMRAALADAGLTPED  295 (412)
T ss_pred             ---------------------------------------------ecccccccCCCCCCCchHHHHHHHHHHHcCCCHhH
Confidence                                                         88999999999999999999999999999999999


Q ss_pred             ccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCcc-C
Q psy5293         242 ISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEE-A  318 (359)
Q Consensus       242 I~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~-~  318 (359)
                      |||++.|+|+|+.+|..|..++..+|+  ..+++|.+.|+.+||++||+|..+++.++++|+++++||++|+++|+|+ +
T Consensus       296 idYinaHgTsT~~nD~~E~~ai~~vfg~~~~~~~vsstKs~tGH~lGAaGaveai~~~l~l~~g~ippt~n~~~~dp~~~  375 (412)
T COG0304         296 IDYINAHGTSTPANDKAESLAIKRVFGEHAKSLPVSSTKSLTGHTLGAAGAVEAIISLLALRDGIIPPTINLDNPDPEAA  375 (412)
T ss_pred             CCEEeCCCccCCCccHHHHHHHHHHhcccccCceeeecccccccChhhHHHHHHHHHHHHHhcCCcCCCCCcCCCCcccc
Confidence            999999999999999999999999998  3468899999999999999999999999999999999999999999997 5


Q ss_pred             CCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         319 GGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      ...+++.+.+...   .++++.|+|||||+|+++++++|+
T Consensus       376 ~l~~v~~~~~~~~---~~~~lsnsfGFGG~Na~lv~~~~~  412 (412)
T COG0304         376 DLDVVPNEARTGA---VRAALSNSFGFGGTNASLVFKRYQ  412 (412)
T ss_pred             cccccCCcccccc---eeEEEecccccCCcceEEEEecCC
Confidence            6777887776554   799999999999999999999985

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=8.1e-54  Score=415.51  Aligned_cols=283  Identities=46%  Similarity=0.753  Sum_probs=263.4

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|++++.+++|. ++++|++.+|++||+++|+++| |++.||..|+++|++|++|++||||+|...++..+..|..+
T Consensus       128 ~~~~~~~~~~~~~n~-~a~~is~~~gl~Gp~~ti~~aCas~~~Al~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~  206 (414)
T PRK08722        128 RKVSPFFVPSTIVNM-IAGNLSIMRGLRGPNIAISTACTTGLHNIGHAARMIAYGDADAMVAGGAEKASTPLGMAGFGAA  206 (414)
T ss_pred             ccCCchhcccccccH-HHHHHHHHhCCCCCccccccccHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHc
Confidence            778999999999999 9999999999999999999999 99999999999999999999999999998899999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.. +++|+..|+|||.+++|++++||+++++|++.+++.++|+++|++|.|++                       
T Consensus       207 ~~ls~~-~~~p~~~~rpfd~~~~G~~~gEGaaalvLe~~~~A~~~g~~i~a~i~g~~-----------------------  262 (414)
T PRK08722        207 KALSTR-NDEPQKASRPWDKDRDGFVLGDGAGMMVLEEYEHAKARGAKIYAELVGFG-----------------------  262 (414)
T ss_pred             CCcccC-CCCCccccCcCcCCCCceEeeceEEEEEEccHHHHHHCCCeEEEEEEEEE-----------------------
Confidence            998743 34578899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.+...|++.+.+..++++++|++++++|+||||+|
T Consensus       263 ----------------------------------------~~~d~~~~~~p~~~~~~~~~a~~~Al~~agi~~~did~ie  302 (414)
T PRK08722        263 ----------------------------------------MSGDAYHMTSPSEDGSGGALAMEAAMRDAGVTGEQIGYVN  302 (414)
T ss_pred             ----------------------------------------EcCCCCCCCCCCcchHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence                                                    5666777778888888889999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCC---CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPA---QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC  323 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~---~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~  323 (359)
                      .|++||..+|..|..+|..+|+.   +.+||++.|+++||+++|||++++++++++|++++|||++|+++|+|.++..++
T Consensus       303 ~hgtgt~~~D~~E~~al~~~fg~~~~~~~~v~s~K~~~GH~~~AaG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~v  382 (414)
T PRK08722        303 AHGTSTPAGDVAEIKGIKRALGEAGSKQVLVSSTKSMTGHLLGAAGSVEAIITVMSLVDQIVPPTINLDDPEEGLDIDLV  382 (414)
T ss_pred             ccCccCCCCCHHHHHHHHHHhcccCCCCceeeCcccccccchHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccC
Confidence            99999999999999999999973   468999999999999999999999999999999999999999999999988888


Q ss_pred             CCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       324 ~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      +.+.+.+.  ..|++++|+|||||+|+|+||+++
T Consensus       383 ~~~~~~~~--~~~~~l~nsfGfGG~n~~lvl~~~  414 (414)
T PRK08722        383 PHTARKVE--SMEYAICNSFGFGGTNGSLIFKKM  414 (414)
T ss_pred             CCccccCC--CCCEEEEecccCCCceEEEEEecC
Confidence            87766542  379999999999999999999974

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=100.00  E-value=6.5e-54  Score=424.15  Aligned_cols=283  Identities=40%  Similarity=0.647  Sum_probs=263.8

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++..+.|+ .+++|++.+|++||+++|+++| |++.||.+|+++|++|++|++||||+|..+.+..+..|..+
T Consensus       255 ~~~~p~~~~~~~~n~-~a~~ia~~~gl~Gp~~tistACASs~~Ai~~A~~~Ir~G~aD~aLvGG~d~~l~p~~~~~f~~~  333 (540)
T PLN02787        255 RKMNPFCVPFATTNM-GSAMLAMDLGWMGPNYSISTACATSNFCILNAANHIIRGEADVMLCGGSDAAIIPIGLGGFVAC  333 (540)
T ss_pred             ccCCcchhhhhcccH-HHHHHHHHhCCCCCccccccccccHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHHHH
Confidence            578999999999999 9999999999999999999999 99999999999999999999999999998999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.. +++|.+.|+|||.+++|+++|||+++++||+.++|.++|++||++|.|++                       
T Consensus       334 ~aLS~~-~~~p~~~~rPFD~~rdGfv~GEGAa~lVLE~~e~A~~rGa~IyA~I~G~g-----------------------  389 (540)
T PLN02787        334 RALSQR-NDDPTKASRPWDMNRDGFVMGEGAGVLLLEELEHAKKRGANIYAEFLGGS-----------------------  389 (540)
T ss_pred             HHhhcc-CCCcccccCCcccCCCCcccccceEEEEEeeHHHHHHCCCeeEEEEEEEE-----------------------
Confidence            999853 45688899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              .+.|+++.+.|++++.+..++++++|++++++|+||+||+
T Consensus       390 ----------------------------------------~s~Da~~~t~p~p~g~g~~~am~~AL~~AGl~p~dIdyIn  429 (540)
T PLN02787        390 ----------------------------------------FTCDAYHMTEPHPEGAGVILCIEKALAQSGVSKEDVNYIN  429 (540)
T ss_pred             ----------------------------------------EecCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence                                                    7778888899999999999999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCCC-CceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPAQ-RLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT  325 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~~-~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~  325 (359)
                      .|||||+.+|..|.++|..+|+.. .++|++.|+++||+++|+|+++++.++++|++|+|||++|+++|+|.++..+++.
T Consensus       430 aHGTGT~~gD~~E~~Ai~~~Fg~~~~~pV~S~Ks~iGH~~gAAGa~eli~~~lal~~g~iPPt~n~~~pd~~~~~~~~v~  509 (540)
T PLN02787        430 AHATSTKAGDLKEYQALMRCFGQNPELRVNSTKSMIGHLLGAAGAVEAIATVQAIRTGWVHPNINLENPESGVDTKVLVG  509 (540)
T ss_pred             ccCccCCCCCHHHHHHHHHHhCCCCCceeeCCCCCcCCCcccchHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcccccc
Confidence            999999999999999999999843 5899999999999999999999999999999999999999999999998766443


Q ss_pred             -cccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         326 -AVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       326 -~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                       +...++   .|++++|+|||||+|+++||++|+
T Consensus       510 ~~~~~~~---ir~aL~nSfGFGG~Naslvl~~~~  540 (540)
T PLN02787        510 PKKERLD---IKVALSNSFGFGGHNSSILFAPYK  540 (540)
T ss_pred             cccccCC---cCEEEEeeecCCceeEEEEEEeCC
Confidence             444444   799999999999999999999985

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=3.6e-53  Score=414.14  Aligned_cols=287  Identities=48%  Similarity=0.744  Sum_probs=267.1

Q ss_pred             CCCCCCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH
Q psy5293           4 RGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA   82 (359)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~   82 (359)
                      ++. +.++|+++..++.|+ ++++|++.||++||+++|+++| ||+.||..|+++|++|++|++||||+|.++++.....
T Consensus       134 ~~~-~~~~~~~~~~~~~~~-~a~~is~~~gl~Gp~~~v~~aCaSg~~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~~  211 (424)
T PRK06333        134 RGP-RRLSPFTIPSFLTNM-AAGHVSIRYGFKGPLGAPVTACAAGVQAIGDAARLIRSGEADVAVCGGTEAAIDRVSLAG  211 (424)
T ss_pred             cCC-cccChhHHhhhhhhH-HHHHHHHHhCCCCCCccccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHH
Confidence            344 678899999999999 9999999999999999999999 9999999999999999999999999999889988888


Q ss_pred             HHhhccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhccccc
Q psy5293          83 FCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYN  162 (359)
Q Consensus        83 ~~~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~  162 (359)
                      |...+.++..+..+|+..++|||.+++|++++||+++++|++.+++.++|++||++|.|++                   
T Consensus       212 f~~~~~l~~~~~~~p~~~~~Pfd~~~~G~~~gEGaa~lvLe~~~~A~~rg~~i~a~i~G~~-------------------  272 (424)
T PRK06333        212 FAAARALSTRFNDAPEQASRPFDRDRDGFVMGEGAGILVIETLEHALARGAPPLAELVGYG-------------------  272 (424)
T ss_pred             HHHcccccccCCCCCCcCCCCCCCCCCCeEEecceEEEEEeeHHHHHHCCCeEEEEEEEEE-------------------
Confidence            8888888865566788899999999999999999999999999999999999999999987                   


Q ss_pred             ccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCc
Q psy5293         163 KLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDI  242 (359)
Q Consensus       163 ~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI  242 (359)
                                                                  .+.|+.+...|.+.+.+..++++++|++++++|+||
T Consensus       273 --------------------------------------------~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agi~p~dI  308 (424)
T PRK06333        273 --------------------------------------------TSADAYHMTAGPEDGEGARRAMLIALRQAGIPPEEV  308 (424)
T ss_pred             --------------------------------------------EcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHC
Confidence                                                        566667777777788899999999999999999999


Q ss_pred             cEEEeccCCCCcccHHHHHHHHhhcCC-CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-C
Q psy5293         243 SYINAHATSTPLGDVIELKAIGSLFPA-QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG-G  320 (359)
Q Consensus       243 ~~ie~h~~~t~~~d~~E~~al~~~~~~-~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~-~  320 (359)
                      ||+|.|++||+.+|..|..++..+|+. .+++|++.|+++||+++|||++++++++++|++++|||++|+++|+|.++ .
T Consensus       309 d~i~~hgtgt~~~D~~E~~al~~~fg~~~~~~v~s~K~~~GH~~gAaG~~~~~~~~l~l~~g~ipp~~~~~~~~~~~~~~  388 (424)
T PRK06333        309 QHLNAHATSTPVGDLGEVAAIKKVFGHVSGLAVSSTKSATGHLLGAAGGVEAIFTILALRDQIAPPTLNLENPDPAAEGL  388 (424)
T ss_pred             CEEeccCCCCccchHHHHHHHHHHhCCCCCceeECcccchhhhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCcccc
Confidence            999999999999999999999999984 47899999999999999999999999999999999999999999999987 6


Q ss_pred             CCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         321 YECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .+++++.+.|+   .|++++|||||||+|+|+||++|.
T Consensus       389 ~~~~~~~~~~~---~~~al~~s~gfGG~n~~~il~~~~  423 (424)
T PRK06333        389 DVVANKARPMD---MDYALSNGFGFGGVNASILFRRWE  423 (424)
T ss_pred             ccccCCCcccC---cCEEEEeeecCCCeeEEEEEeccC
Confidence            66778888887   799999999999999999999986

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=4.4e-53  Score=410.52  Aligned_cols=284  Identities=43%  Similarity=0.681  Sum_probs=262.7

Q ss_pred             CCCCCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHH
Q psy5293           5 GATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAF   83 (359)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~   83 (359)
                      +. +.++|+.+..+++|. ++.++++.++++||+++++++| |++.||.+|+++|++|++|++||||+|..+++..+..|
T Consensus       133 ~~-~~~~~~~~~~~~~n~-~a~~is~~~~~~G~~~ti~taCaS~~~Al~~A~~~I~~G~~d~aivgg~~~~~~~~~~~~f  210 (418)
T PRK07910        133 GL-RAVSPLAVQMYMPNG-PAAAVGLERHAKAGVITPVSACASGSEAIAQAWRQIVLGEADIAICGGVETRIEAVPIAGF  210 (418)
T ss_pred             Cc-ccCChhHHHHhcccc-HHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHH
Confidence            44 678899999999999 9999999999999999999999 99999999999999999999999999998999999999


Q ss_pred             Hhhcc-ccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhccccc
Q psy5293          84 CRVRA-LATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYN  162 (359)
Q Consensus        84 ~~~~~-l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~  162 (359)
                      ..++. ++.. +++|++.|+|||.+++|+++|||+++++|++.+++.++|++|+++|+|++                   
T Consensus       211 ~~~~~~ls~~-~~~~~~~~rPFd~~~~G~v~gEGaa~vvLe~~~~A~~rg~~i~a~i~g~~-------------------  270 (418)
T PRK07910        211 AQMRIVMSTN-NDDPAGACRPFDKDRDGFVFGEGGALMVIETEEHAKARGANILARIMGAS-------------------  270 (418)
T ss_pred             HhcCCccccC-CCCCCCCcCCCcCCCCCEeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEE-------------------
Confidence            99998 7632 44578999999999999999999999999999999999999999999987                   


Q ss_pred             ccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCc
Q psy5293         163 KLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDI  242 (359)
Q Consensus       163 ~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI  242 (359)
                                                                  ...|+.+...|++.+.+..++++++|++++++|+||
T Consensus       271 --------------------------------------------~~~dg~~~~~~~~~~~~~~~a~~~Al~~agi~~~di  306 (418)
T PRK07910        271 --------------------------------------------ITSDGFHMVAPDPNGERAGHAMTRAIELAGLTPGDI  306 (418)
T ss_pred             --------------------------------------------EecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHC
Confidence                                                        666777778888888899999999999999999999


Q ss_pred             cEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCC
Q psy5293         243 SYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE  322 (359)
Q Consensus       243 ~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~  322 (359)
                      +|+|.|++||+.+|..|.++|..+|+....+|++.|+++||+++|||++++++++++|++++|||++|+++|+|+++..+
T Consensus       307 d~ie~hgtgt~~~D~~E~~Al~~~fg~~~~~v~s~K~~~GH~~~AaG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~l~~  386 (418)
T PRK07910        307 DHVNAHATGTSVGDVAEGKAINNALGGHRPAVYAPKSALGHSVGAVGAVESILTVLALRDGVIPPTLNLENLDPEIDLDV  386 (418)
T ss_pred             CEEEcCCcCCCCCCHHHHHHHHHHhCCCCCceeCccccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc
Confidence            99999999999999999999999998666789999999999999999999999999999999999999999999998877


Q ss_pred             CCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      ++.+....   ..|++++|||||||+|+++||+++
T Consensus       387 ~~~~~~~~---~~~~al~nsfGfGG~N~slvl~~~  418 (418)
T PRK07910        387 VAGEPRPG---NYRYAINNSFGFGGHNVALAFGRY  418 (418)
T ss_pred             CCCCCcCC---CccEEEEeeecCCCeeEEEEEecC
Confidence            76544322   379999999999999999999985

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=100.00  E-value=4.1e-52  Score=405.40  Aligned_cols=287  Identities=51%  Similarity=0.826  Sum_probs=263.0

Q ss_pred             CCCCCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHH
Q psy5293           5 GATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAF   83 (359)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~   83 (359)
                      +. +.++|++++.+++|+ ++++|++.||++||+++|+++| ||+.||.+|+++|++|++|++||||+|.++++..+..|
T Consensus       130 ~~-~~~~~~~~~~~~~n~-~a~~is~~~~l~Gp~~ti~~aCaSg~~Al~~A~~~I~~G~~d~~lvgG~e~~~~p~~~~~f  207 (421)
T PTZ00050        130 GH-SRVSPYFIPKILGNM-AAGLVAIKHKLKGPSGSAVTACATGAHCIGEAFRWIKYGEADIMICGGTEASITPVSFAGF  207 (421)
T ss_pred             Cc-CcCCHHHHHhhhhhH-HHHHHHHHhCCCCcccccccHhHHHHHHHHHHHHHHHcCCCCEEEECcccccCCHHHHHHH
Confidence            44 678999999999999 9999999999999999999999 99999999999999999999999999998899888889


Q ss_pred             HhhccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccc
Q psy5293          84 CRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNK  163 (359)
Q Consensus        84 ~~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~  163 (359)
                      ..++.++.....+|...++|||.+++|++++||+++++|++.+++.++|++||++|+|++                    
T Consensus       208 ~~~~~l~~~~~~~p~~~~~pfd~~~~G~~~gEGAaalvLe~~~~A~~~g~~i~a~i~g~~--------------------  267 (421)
T PTZ00050        208 SRMRALCTKYNDDPQRASRPFDKDRAGFVMGEGAGILVLEELEHALRRGAKIYAEIRGYG--------------------  267 (421)
T ss_pred             HhhhccccCcCCCCCccCCCCcCCCCCEeeccceEEEEEeeHHHHHHCCCeEEEEEEEEE--------------------
Confidence            999988754455678899999999999999999999999999999999999999999987                    


Q ss_pred             cCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHH-cCCCCCCc
Q psy5293         164 LSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALID-ANLSPGDI  242 (359)
Q Consensus       164 ~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~-agl~~~dI  242 (359)
                                                                 ...++.+...|++++.+..++++++|++ ++++|+||
T Consensus       268 -------------------------------------------~~~d~~~~~~p~~~~~~~~~ai~~Al~~~Agi~~~dI  304 (421)
T PTZ00050        268 -------------------------------------------SSSDAHHITAPHPDGRGARRCMENALKDGANININDV  304 (421)
T ss_pred             -------------------------------------------EcCCCCCCCCCCCChHHHHHHHHHHHHhccCCChhhC
Confidence                                                       5566677778888889999999999999 99999999


Q ss_pred             cEEEeccCCCCcccHHHHHHHHhhcCC---CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC
Q psy5293         243 SYINAHATSTPLGDVIELKAIGSLFPA---QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG  319 (359)
Q Consensus       243 ~~ie~h~~~t~~~d~~E~~al~~~~~~---~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~  319 (359)
                      ||+|.|+++|+.+|..|.+++..+|+.   ..++|++.|+++||+++|||++++++++++|++++|||++|+++|+|+++
T Consensus       305 d~ie~hgtgt~~~D~~E~~al~~~~~~~~~~~~~v~s~K~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~  384 (421)
T PTZ00050        305 DYVNAHATSTPIGDKIELKAIKKVFGDSGAPKLYVSSTKGGLGHLLGAAGAVESIVTILSLYEQIIPPTINLENPDAECD  384 (421)
T ss_pred             CEEECCCccCCCCCHHHHHHHHHHhccccCCCceEECccccccccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCC
Confidence            999999999999999999999999984   46999999999999999999999999999999999999999999999988


Q ss_pred             CCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         320 GYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      ..+++.... ++....|++++|||||||+|+++||+++
T Consensus       385 l~~~~~~~~-~~~~~~~~~l~nsfgfgG~n~~lvl~~~  421 (421)
T PTZ00050        385 LNLVQGKTA-HPLQSIDAVLSTSFGFGGVNTALLFTKY  421 (421)
T ss_pred             ccccCCccc-CcCCCCCEEEEeeecCCCeeEEEEEeCC
Confidence            766665433 3222479999999999999999999985

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=100.00  E-value=7.6e-52  Score=399.86  Aligned_cols=278  Identities=38%  Similarity=0.630  Sum_probs=250.7

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++..++|+ ++++|++.+|++||+++|+++| ||+.||..|+++|++|++|++||||+|. +.+.....|..+
T Consensus       126 ~~~~p~~~~~~~~~~-~a~~is~~~~l~Gp~~tvs~aCas~~~Ai~~A~~~ir~G~~d~~lvgg~d~-~~~~~~~~f~~~  203 (406)
T PRK07967        126 KRVGPYAVTKAMAST-VSACLATPFKIKGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LDWEMSCLFDAM  203 (406)
T ss_pred             ccCCchhhcccccch-HHHHHHHHHCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeeecc-cChHHHHHHHHh
Confidence            678999999999999 9999999999999999999999 9999999999999999999999999997 455556668889


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++...+.+|+..|+|||.+++|+++|||+++++||+.+++.++|++||++|.|++                       
T Consensus       204 ~~ls~~~~~~p~~~~rPFd~~r~G~v~gEGaa~lvLe~~~~A~~rga~i~a~i~G~g-----------------------  260 (406)
T PRK07967        204 GALSTKYNDTPEKASRAYDANRDGFVIAGGGGVVVVEELEHALARGAKIYAEIVGYG-----------------------  260 (406)
T ss_pred             hhhccCCCCCCCcCCcCCcCCCCceeeeceEEEEEEeeHHHHHhCCCcEEEEEEEEE-----------------------
Confidence            998865566788999999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              .+.|+.+.+.|  ++.+..++++++|+.+  .+ |||||+
T Consensus       261 ----------------------------------------~~~d~~~~~~p--~~~~~~~a~~~Al~~~--~~-~Idyi~  295 (406)
T PRK07967        261 ----------------------------------------ATSDGYDMVAP--SGEGAVRCMQMALATV--DT-PIDYIN  295 (406)
T ss_pred             ----------------------------------------ECCCCCCCCCC--CHHHHHHHHHHHHhCC--CC-CccEEE
Confidence                                                    66667777666  5788899999999864  45 999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-CCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG-GYECPT  325 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~-~~~~~~  325 (359)
                      .||+||+.+|..|..++.++|+...+||++.|+++||+++|+|+.+++.++++|++++|||++|+++++|++. ..+++.
T Consensus       296 aHgtGT~~~D~~E~~Ai~~~fg~~~~~v~s~K~~~GH~~~AaG~~e~i~~~lal~~~~iPpt~~~~~~~~~~~~~~~~~~  375 (406)
T PRK07967        296 THGTSTPVGDVKELGAIREVFGDKSPAISATKSLTGHSLGAAGVQEAIYSLLMMEHGFIAPSANIEELDPQAAGMPIVTE  375 (406)
T ss_pred             cCCCCCCCCCHHHHHHHHHHhCCCCCeeECcccccccCccccchHHHHHHHHHHhcCcCCCCCCCCCCCccccCCCccCC
Confidence            9999999999999999999998767799999999999999999999999999999999999999999999874 444444


Q ss_pred             cccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      ... +.  ..|++++|+|||||+|+++||++|+
T Consensus       376 ~~~-~~--~~~~~l~~sfgfGG~n~~lvl~~~~  405 (406)
T PRK07967        376 TTD-NA--ELTTVMSNSFGFGGTNATLVFRRYK  405 (406)
T ss_pred             CCc-CC--CCCEEEEecccCCCeeEEEEEEecC
Confidence            332 22  3799999999999999999999985

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=100.00  E-value=1.8e-51  Score=402.20  Aligned_cols=285  Identities=55%  Similarity=0.865  Sum_probs=261.7

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|++++..++|+ ++++|++.+|++||+++|+++| ||+.||..|+++|++|++|++||||+|.++++.....+..+
T Consensus       148 ~~~~p~~~~~~~~n~-~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~  226 (437)
T PLN02836        148 RRLSPFFVPRILINM-AAGHVSIRYGFQGPNHAAVTACATGAHSIGDAFRMIQFGDADVMVAGGTESSIDALSIAGFSRS  226 (437)
T ss_pred             CCCChhhhhhhcccH-HHHHHHHHhCCCCceeceeChhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHHh
Confidence            678999999999999 9999999999999999999999 99999999999999999999999999998899888889999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++...+.+|+..++|||.+++|++++||+++++|++.+++.++|+++|++|+|++                       
T Consensus       227 ~~l~~~~~~~p~~~~~pfd~~~~G~~~gEGaaalVLe~~~~A~~~g~~i~a~I~g~~-----------------------  283 (437)
T PLN02836        227 RALSTKFNSCPTEASRPFDCDRDGFVIGEGAGVLVLEELEHAKRRGAKIYAEVRGYG-----------------------  283 (437)
T ss_pred             hhhhcccCCCcccccCCcccCCCCeeeecCEEEEEEeeHHHHHHCCCceEEEEEeee-----------------------
Confidence            888865555677899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              .+.++.+...|++.+.+..++++++|++++++|+||||+|
T Consensus       284 ----------------------------------------~~~d~~~~~~p~~~~~~~~~a~~~Al~~Agi~~~dId~ve  323 (437)
T PLN02836        284 ----------------------------------------MSGDAHHITQPHEDGRGAVLAMTRALQQSGLHPNQVDYVN  323 (437)
T ss_pred             ----------------------------------------ecCCCCCCcCCCcchHHHHHHHHHHHHHcCCCHhHcCEEE
Confidence                                                    5566677778888888889999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCC----CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPA----QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE  322 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~----~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~  322 (359)
                      +|++||..+|..|.+++..+|+.    +.++|++.|+++||+++|||++++++++++|++++|||++|+++|+|+++..+
T Consensus       324 ~hgtgt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~n~~~~~p~~~~~~  403 (437)
T PLN02836        324 AHATSTPLGDAVEARAIKTVFSEHATSGGLAFSSTKGATGHLLGAAGAVEAIFSVLAIHHGIAPPTLNLERPDPIFDDGF  403 (437)
T ss_pred             ccCCcCcCcCHHHHHHHHHHhcccccCCCCeeECCcccccccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccc
Confidence            99999999999999999999983    36899999999999999999999999999999999999999999999998777


Q ss_pred             CCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      ++....  +....|++++|||||||+|+|+||++.+
T Consensus       404 ~~~~~~--~~~~~~~~l~nsfgfGG~na~lvl~~~~  437 (437)
T PLN02836        404 VPLTAS--KAMLIRAALSNSFGFGGTNASLLFTSPP  437 (437)
T ss_pred             CcccCC--CCCCccEEEEecccCCCeeEEEEEecCC
Confidence            665332  1223799999999999999999999864

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=100.00  E-value=8.2e-51  Score=393.20  Aligned_cols=274  Identities=31%  Similarity=0.410  Sum_probs=252.4

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.+..+++|. ++++|++.+|++||+++|+++| ||+.||.+|+++|++|+ |++||||+|..+++..+..+..+
T Consensus       125 ~~~~~~~~~~~~~~~-~a~~is~~~gl~Gp~~ti~~acaS~~~Al~~A~~~i~~G~-d~~i~gg~d~~~~p~~~~~~~~~  202 (399)
T cd00832         125 RHVSAYQSFAWFYAV-NTGQISIRHGMRGPSGVVVAEQAGGLDALAQARRLVRRGT-PLVVSGGVDSALCPWGWVAQLSS  202 (399)
T ss_pred             cccChhhhhhhhhhH-HHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCC-CeEEEEeeccccCHHHHHHHHhc
Confidence            678899999999999 9999999999999999999999 99999999999999999 99999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.  .++|...|+|||.+++|+++|||+++++||+.+++.++|++||++|.|++                       
T Consensus       203 ~~ls~--~~~p~~~~rPFd~~~~G~~~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~-----------------------  257 (399)
T cd00832         203 GRLST--SDDPARAYLPFDAAAAGYVPGEGGAILVLEDAAAARERGARVYGEIAGYA-----------------------  257 (399)
T ss_pred             cccCC--CCCCCCCcCCCcCCCCCEeeeceEEEEEEeeHHHHHHCCCeEEEEEEeEE-----------------------
Confidence            99874  44577899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              .+.|+....   ..+.+..++++++|++++++|+||||++
T Consensus       258 ----------------------------------------~~~d~~~~~---~~~~~~~~a~~~al~~ag~~~~~i~~v~  294 (399)
T cd00832         258 ----------------------------------------ATFDPPPGS---GRPPGLARAIRLALADAGLTPEDVDVVF  294 (399)
T ss_pred             ----------------------------------------EcCCCCCCC---CCHHHHHHHHHHHHHHcCCCHHHccEEE
Confidence                                                    444444322   1357889999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTA  326 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~  326 (359)
                      .|++||+.+|..|.++|..+|+...+||++.|+++||+++|+|+++++.++++|++++|||++|+++|+|+++..+++.+
T Consensus       295 ~hgtgt~~~D~~E~~al~~~fg~~~~pv~s~K~~~Gh~~~aaG~~~l~~~~l~l~~~~ipp~~n~~~~~p~~~l~~v~~~  374 (399)
T cd00832         295 ADAAGVPELDRAEAAALAAVFGPRGVPVTAPKTMTGRLYAGGAPLDVATALLALRDGVIPPTVNVTDVPPAYGLDLVTGR  374 (399)
T ss_pred             eccCcCCCCCHHHHHHHHHHhCCCCCceeCCCchhcchHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCcccCCCc
Confidence            99999999999999999999987678999999999999999999999999999999999999999999999988888776


Q ss_pred             ccccccCCccEEEEeCcCcCcceeeEEE
Q psy5293         327 VTEWKTDGRRVALKNSFGFGGTNACLCI  354 (359)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~gG~~~~~il  354 (359)
                      .++++   .|++++|||||||+|+++||
T Consensus       375 ~~~~~---~~~al~nsfgfGG~na~lvl  399 (399)
T cd00832         375 PRPAA---LRTALVLARGRGGFNSALVV  399 (399)
T ss_pred             ccCCC---CCEEEEeccCCCCcceEEEC
Confidence            65554   79999999999999999986

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.7e-50  Score=392.35  Aligned_cols=281  Identities=46%  Similarity=0.691  Sum_probs=259.3

Q ss_pred             CCCCCCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH
Q psy5293           4 RGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA   82 (359)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~   82 (359)
                      ++. +.++|++++..++|+ ++++|++.+|++||++++.++| |++.||..|+++|++|++|++||+|+|..+++..+..
T Consensus       123 ~~~-~~~~~~~~~~~~~~~-~a~~is~~~gl~Gp~~~~~~acas~~~Al~~A~~~i~~G~~d~~lv~g~d~~l~~~~~~~  200 (406)
T PRK08439        123 KGP-RKISPFFIPSALVNM-LGGFISIEHGLKGPNLSSVTACAAGTHAIIEAVKTIMLGGADKMLVVGAESAICPVGIGG  200 (406)
T ss_pred             cCc-cccCchhcccccccH-HHHHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEecchhccCHHHHHH
Confidence            344 778999999999999 9999999999999999999999 9999999999999999999999999999899999999


Q ss_pred             HHhhccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhccccc
Q psy5293          83 FCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYN  162 (359)
Q Consensus        83 ~~~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~  162 (359)
                      |..++.++.. +.+|...|+|||.+++|+++|||+++++||+.+++.++|++||++|.|++                   
T Consensus       201 f~~~~~ls~~-~~~p~~~~rpfd~~~~G~v~gEGa~~lvLe~~~~A~~rg~~i~a~i~g~~-------------------  260 (406)
T PRK08439        201 FAAMKALSTR-NDDPKKASRPFDKDRDGFVMGEGAGALVLEEYESAKKRGAKIYAEIIGFG-------------------  260 (406)
T ss_pred             HHHhCccccC-CCCCccCcCCccCCCCcEEeeCceEEEEEccHHHHHHCCCeEEEEEEeEE-------------------
Confidence            9999999853 44578899999999999999999999999999999999999999999987                   


Q ss_pred             ccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCc
Q psy5293         163 KLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDI  242 (359)
Q Consensus       163 ~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI  242 (359)
                                                                  .+.|+.+...|++  .+..++++++|+++++  +||
T Consensus       261 --------------------------------------------~~~d~~~~~~p~~--~~~~~a~~~al~~ag~--~~i  292 (406)
T PRK08439        261 --------------------------------------------ESGDANHITSPAP--EGPLRAMKAALEMAGN--PKI  292 (406)
T ss_pred             --------------------------------------------ccCCCCCCCCCCH--HHHHHHHHHHHHHcCC--Ccc
Confidence                                                        5566677777765  6778999999999998  899


Q ss_pred             cEEEeccCCCCcccHHHHHHHHhhcCCC--CceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCC
Q psy5293         243 SYINAHATSTPLGDVIELKAIGSLFPAQ--RLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGG  320 (359)
Q Consensus       243 ~~ie~h~~~t~~~d~~E~~al~~~~~~~--~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~  320 (359)
                      +|++.|++||+.+|..|.++|..+|+..  .++|++.|+++||+.+|||+++++.++++|++|+|||++|+++|+|+++.
T Consensus       293 ~~v~~hgtgt~~~D~~E~~al~~~f~~~~~~~~v~s~K~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~  372 (406)
T PRK08439        293 DYINAHGTSTPYNDKNETAALKELFGSKEKVPPVSSTKGQIGHCLGAAGAIEAVISIMAMRDGILPPTINQETPDPECDL  372 (406)
T ss_pred             CEEEccCCcCCCCCHHHHHHHHHHhcccCCCCeEECcccccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCCc
Confidence            9999999999999999999999999843  57899999999999999999999999999999999999999999999998


Q ss_pred             CCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         321 YECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      ++++.+.++++   .+++++|||||||+|+++||++|
T Consensus       373 ~~~~~~~~~~~---~~~~l~nsfgfGG~n~~lvl~~~  406 (406)
T PRK08439        373 DYIPNVARKAE---LNVVMSNSFGFGGTNGVVIFKKV  406 (406)
T ss_pred             ccCCCccccCC---CCEEEEeeecCCCceEEEEEecC
Confidence            88887766655   89999999999999999999986

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.3e-50  Score=392.03  Aligned_cols=276  Identities=38%  Similarity=0.580  Sum_probs=252.1

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.+..+++|. ++++|++.++++||+++|+++| |++.||..|+++|++|++|++||||+|. +++.....|..+
T Consensus       128 ~~~~~~~~~~~~~n~-~a~~is~~~~~~Gp~~ti~~acas~~~Al~~A~~~I~~G~~d~~lvgg~d~-~~~~~~~~f~~l  205 (405)
T PRK09116        128 SGITATTYVRMMPHT-TAVNVGLFFGLKGRVIPTSSACTSGSQGIGYAYEAIKYGYQTVMLAGGAEE-LCPTEAAVFDTL  205 (405)
T ss_pred             cccChhhhhhhcccH-HHHHHHHHhCCCCCcccccchhhhHHHHHHHHHHHHHcCCCCEEEEecchh-cChHHHHHHHHh
Confidence            668999999999999 9999999999999999999999 9999999999999999999999999998 677777778887


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.. ...|...++|||.+++|+++|||+++++||+.+++.++|++||++|.|++                       
T Consensus       206 ~~~~~~-~~~~~~~~rPfd~~~~G~v~gEGa~~~vLe~~~~A~~rga~i~a~i~g~~-----------------------  261 (405)
T PRK09116        206 FATSTR-NDAPELTPRPFDANRDGLVIGEGAGTLVLEELEHAKARGATIYAEIVGFG-----------------------  261 (405)
T ss_pred             hhhccC-CCCCCCCCCCCcCCCCCEeeeccEEEEEEccHHHHHhCCCceEEEEEEEE-----------------------
Confidence            776532 34577889999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              .+.|+.+...|  ...+..++++++|++++++|+||+|++
T Consensus       262 ----------------------------------------~~~d~~~~~~p--~~~~~~~ai~~AL~~Agi~p~dId~I~  299 (405)
T PRK09116        262 ----------------------------------------TNSDGAHVTQP--QAETMQIAMELALKDAGLAPEDIGYVN  299 (405)
T ss_pred             ----------------------------------------EcCCCCcCCCC--CHHHHHHHHHHHHHHhCCCHHHcCEEE
Confidence                                                    55556666555  446778999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccC-CCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEA-GGYECPT  325 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~-~~~~~~~  325 (359)
                      .|++||..+|..|..+|..+|+. .+||++.|+++||+++|+|+++++.++++|++++|||++|+++|+|++ +.++++.
T Consensus       300 ~Hgtgt~~~D~~E~~Ai~~~fg~-~~pv~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ippt~~~~~~~~~~~~l~~v~~  378 (405)
T PRK09116        300 AHGTATDRGDIAESQATAAVFGA-RMPISSLKSYFGHTLGACGALEAWMSIEMMNEGWFAPTLNLTQVDPACGALDYIMG  378 (405)
T ss_pred             CcCccCCCCCHHHHHHHHHHhCC-CCeeECcchhhcccHHHHHHHHHHHHHHHHHcCccCCCCCCCCCCCCCcccCccCC
Confidence            99999999999999999999974 689999999999999999999999999999999999999999999998 5778888


Q ss_pred             cccccccCCccEEEEeCcCcCcceeeEEEe
Q psy5293         326 AVTEWKTDGRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~gG~~~~~il~  355 (359)
                      +.++++   .+++++|||||||+|+++||+
T Consensus       379 ~~~~~~---~~~~l~nsfGfGG~n~~lvl~  405 (405)
T PRK09116        379 EAREID---TEYVMSNNFAFGGINTSLIFK  405 (405)
T ss_pred             CCccCC---CCEEEEeeecCCcccEEEEEC
Confidence            877776   799999999999999999985

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=2.5e-50  Score=392.80  Aligned_cols=283  Identities=54%  Similarity=0.843  Sum_probs=259.5

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.+..+++|+ ++++|++.||++||+++|+++| ||+.||..|+++|++|++|++||||+|.++++.....+..+
T Consensus       126 ~~~~~~~~~~~~~~~-~a~~is~~~gl~Gp~~tv~~acaSgl~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~  204 (411)
T PRK07314        126 RRVSPFFVPMAIINM-AAGHVSIRYGAKGPNHSIVTACATGAHAIGDAARLIAYGDADVMVAGGAEAAITPLGIAGFAAA  204 (411)
T ss_pred             cccChhhhhhhcchH-HHHHHHHHhCCCCccccchhhhHHHHHHHHHHHHHHhcCCCCEEEEeeecccCCHHHHHHHHHh
Confidence            568889999999999 9999999999999999999999 99999999999999999999999999998999888888888


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.. ..+|...++|||.+++|++++||+++++|++.+.+.+++++++++|.|++                       
T Consensus       205 ~~ls~~-~~~p~~~~~pfd~~~dG~~~geGAaavvL~~~~~A~~~g~~~~a~I~g~~-----------------------  260 (411)
T PRK07314        205 RALSTR-NDDPERASRPFDKDRDGFVMGEGAGILVLEELEHAKARGAKIYAEVVGYG-----------------------  260 (411)
T ss_pred             ccccCC-CCCCCcCcCCCcCCCCCEeEEceEEEEEEeeHHHHHHCCCeEEEEEEEEE-----------------------
Confidence            888743 44577889999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...++.....|++.+.+..++++++|++++++++||||+|
T Consensus       261 ----------------------------------------~~~d~~~~~~~~~~~~~~~~a~~~Al~~agi~~~dId~v~  300 (411)
T PRK07314        261 ----------------------------------------MTGDAYHMTAPAPDGEGAARAMKLALKDAGINPEDIDYIN  300 (411)
T ss_pred             ----------------------------------------EcCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence                                                    5555666667777778889999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCC--CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPA--QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~--~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  324 (359)
                      .|++||+.+|..|.+++.++|+.  .+++|++.|+++||+++|||++++++++++|++++|||++|+++|+|.++...++
T Consensus       301 ~hgtgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~  380 (411)
T PRK07314        301 AHGTSTPAGDKAETQAIKRVFGEHAYKVAVSSTKSMTGHLLGAAGAVEAIFSVLAIRDQVIPPTINLDNPDEECDLDYVP  380 (411)
T ss_pred             ccccCCccccHHHHHHHHHHhcccCCCCeeECccchhchhHHHHHHHHHHHHHHHHhCCCcCCCCCCCCCCCCCCccccC
Confidence            99999999999999999999983  5799999999999999999999999999999999999999999999998877777


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .+....+   .|++++|+|||||+|+|+||++|.
T Consensus       381 ~~~~~~~---~~~al~~s~gfGG~n~~~vl~~~~  411 (411)
T PRK07314        381 NEARERK---IDYALSNSFGFGGTNASLVFKRYE  411 (411)
T ss_pred             CcccCCC---CCEEEEecccCCCceEEEEEecCC
Confidence            6655443   799999999999999999999984

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=4.7e-50  Score=384.05  Aligned_cols=270  Identities=39%  Similarity=0.620  Sum_probs=248.1

Q ss_pred             CCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhc
Q psy5293           9 TLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVR   87 (359)
Q Consensus         9 ~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~   87 (359)
                      .++|..+..+++|+ +++++++.++++||++++.++| ||+.||..|+++|++|++|++||||+|..+++..+..|..++
T Consensus       111 ~~~~~~~~~~~~n~-~a~~ia~~~~~~Gp~~ti~~aCasg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~~~~~~  189 (381)
T PRK05952        111 ELDLENWLDTLPHQ-AAIAAARQIGTQGPVLAPMAACATGLWAIAQGVELIQTGQCQRVIAGAVEAPITPLTLAGFQQMG  189 (381)
T ss_pred             ccCHHHHHHhcccH-HHHHHHHHhCCCCccccccchhHHHHHHHHHHHHHHHcCCCCEEEEccccccCCHHHHHHHHhcC
Confidence            57889999999999 9999999999999999999999 999999999999999999999999999889999999999999


Q ss_pred             cccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293          88 ALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus        88 ~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                      .++.       ..|+|||.+++|+++|||+++++|++.+++.+++++||++|.|++                        
T Consensus       190 ~ls~-------~~~rPfd~~r~G~v~gEGaa~lvLe~~~~A~~rg~~i~a~I~g~~------------------------  238 (381)
T PRK05952        190 ALAK-------TGAYPFDRQREGLVLGEGGAILVLESAELAQKRGAKIYGQILGFG------------------------  238 (381)
T ss_pred             CcCC-------CCCCCCCCCCCCccccccEEEEEEeeHHHHHhCCCceEEEEEEEE------------------------
Confidence            8873       359999999999999999999999999999999999999999987                        


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA  247 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~  247 (359)
                                                             ...|+.+...|++.+.+..++++++|++++++|+||||++.
T Consensus       239 ---------------------------------------~~~d~~~~~~~~~~~~~~~~ai~~Al~~agi~p~dId~i~~  279 (381)
T PRK05952        239 ---------------------------------------LTCDAYHMSAPEPDGKSAIAAIQQCLARSGLTPEDIDYIHA  279 (381)
T ss_pred             ---------------------------------------ecCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCHHHeeEEEc
Confidence                                                   56667777788888889999999999999999999999999


Q ss_pred             ccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc
Q psy5293         248 HATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAV  327 (359)
Q Consensus       248 h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~  327 (359)
                      |++||+.+|..|.+++.++|+ ..+||++.|+++||+++|+|+++++.++++|++++|||++|+++|.+++  .+++ ++
T Consensus       280 hgtgt~~~D~~E~~al~~~fg-~~~~v~s~K~~~GH~~~AaG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~--~~v~-~~  355 (381)
T PRK05952        280 HGTATRLNDQREANLIQALFP-HRVAVSSTKGATGHTLGASGALGVAFSLLALRHQQLPPCVGLQEPEFDL--NFVR-QA  355 (381)
T ss_pred             cCCCCCCCcHHHHHHHHHHcC-CCCeeecchhhhccChHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCC--CcCC-Cc
Confidence            999999999999999999997 4689999999999999999999999999999999999999999876543  3333 33


Q ss_pred             cccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         328 TEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                      ...   ..|++++|+|||||+|+++||++
T Consensus       356 ~~~---~~~~~l~~s~gfGG~na~lvl~~  381 (381)
T PRK05952        356 QQS---PLQNVLCLSFGFGGQNAAIALGK  381 (381)
T ss_pred             ccC---CCCEEEEeeecCCCeeEEEEEeC
Confidence            322   37999999999999999999985

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA

Probab=100.00  E-value=3.2e-50  Score=448.98  Aligned_cols=278  Identities=30%  Similarity=0.452  Sum_probs=255.6

Q ss_pred             CCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhc
Q psy5293           9 TLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVR   87 (359)
Q Consensus         9 ~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~   87 (359)
                      .+.++.+++.+.|+ ++++||+.|||+||+++|+++| ||+.||++|++.|++|+||++||||++..+++..+..|...+
T Consensus       171 ~~~~~~~~g~~~n~-~A~RIS~~f~L~Gps~tVdtACsSSL~Al~~A~~~L~~G~~D~alvGGv~~~~~p~~~~~fs~~~  249 (2582)
T TIGR02813       171 HWEENSFPGSLGNV-ISGRIANRFDLGGMNCVVDAACAGSLAAIRMALSELLEGRSEMMITGGVCTDNSPFMYMSFSKTP  249 (2582)
T ss_pred             ccCccccccccccH-HHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecceeeCCHHHHHHHHhcc
Confidence            35677889999999 9999999999999999999999 999999999999999999999999999989999999999999


Q ss_pred             cccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293          88 ALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus        88 ~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                      +++      +++.|+|||.+++|+++|||+++++|++.++|.++|++||++|+|++                        
T Consensus       250 ~lS------~~g~crpFD~~adG~v~GEGag~vvLkrL~dA~~dGd~IyAvI~G~g------------------------  299 (2582)
T TIGR02813       250 AFT------TNEDIQPFDIDSKGMMIGEGIGMMALKRLEDAERDGDRIYAVIKGVG------------------------  299 (2582)
T ss_pred             CcC------CCCCccCCCCCCCcccccceEEEEEeCcHHHHHhCCCcEEEEEEEEE------------------------
Confidence            998      67889999999999999999999999999999999999999999987                        


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCc--cCCCCCcChHHHHHHHHHHHHHcCCCCCCccEE
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGH--HLTSPREDGRGALLAMTRALIDANLSPGDISYI  245 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~--~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~i  245 (359)
                                                             .+.|+.  ..+.|+  ..++.++++++|+++|++|+||+||
T Consensus       300 ---------------------------------------~~~DG~~~~itaP~--~~gq~~~i~~Al~~Agi~p~~I~yI  338 (2582)
T TIGR02813       300 ---------------------------------------ASSDGKFKSIYAPR--PEGQAKALKRAYDDAGFAPHTCGLI  338 (2582)
T ss_pred             ---------------------------------------EcCCCCCCCCcCCC--HHHHHHHHHHHHHHcCCCHHHCCEE
Confidence                                                   444554  445554  4567899999999999999999999


Q ss_pred             EeccCCCCcccHHHHHHHHhhcCC-----CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCC
Q psy5293         246 NAHATSTPLGDVIELKAIGSLFPA-----QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGG  320 (359)
Q Consensus       246 e~h~~~t~~~d~~E~~al~~~~~~-----~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~  320 (359)
                      |.|||||..+|+.|.++|..+|+.     +.++|++.|+++||+++|||++++++++++|++++|||++|+++|+|.+++
T Consensus       339 eaHGTGT~~gD~~E~~Al~~vf~~~~~~~~~~~vgSvKs~iGH~~~AAG~a~lik~~lal~~~~iPp~~~~~~pnp~~~~  418 (2582)
T TIGR02813       339 EAHGTGTAAGDVAEFGGLVSVFSQDNDQKQHIALGSVKSQIGHTKSTAGTAGMIKAVLALHHKVLPPTINVDQPNPKLDI  418 (2582)
T ss_pred             EecCCCCCCCCHHHHHHHHHHhcccccCCCCceeeccccccccchHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCc
Confidence            999999999999999999999973     358999999999999999999999999999999999999999999998864


Q ss_pred             ----CCCCCccccccc---CCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         321 ----YECPTAVTEWKT---DGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       321 ----~~~~~~~~~~~~---~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                          ++++.+.++|..   +.+|++++|||||||+|+|+||++|+
T Consensus       419 ~~~~~~v~~~~~pw~~~~~~~~r~a~vnsfGfGGtN~hvvlee~~  463 (2582)
T TIGR02813       419 ENSPFYLNTETRPWMQREDGTPRRAGISSFGFGGTNFHMVLEEYS  463 (2582)
T ss_pred             cccceeecCCcccCcccCCCCccEEEEeCccCCCeeEEEEEeecC
Confidence                468888889963   34799999999999999999999984

Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=100.00  E-value=3.2e-49  Score=384.71  Aligned_cols=280  Identities=56%  Similarity=0.872  Sum_probs=257.1

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+++..+++|. ++++|++.||++||+++|+++| ||+.||..|+++|++|++|++||||+|.++++.....+...
T Consensus       125 ~~~~~~~~~~~~~~~-~a~~is~~~gl~g~~~~v~~acaSg~~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~  203 (407)
T TIGR03150       125 RRVSPFFIPMSIINM-AAGQISIRYGAKGPNHAVVTACATGTHAIGDAFRLIQRGDADVMIAGGAEAAITPLGIAGFAAM  203 (407)
T ss_pred             cccChhhhhcccccH-HHHHHHHHhCCCCcccccccHHHHHHHHHHHHHHHHhcCCCCEEEEecccCcCCHHHHHHHHHh
Confidence            678899999999999 9999999999999999999999 99999999999999999999999999998999888888888


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.. +.+|...++|||.+++|++++||+++++|++.+.+.+++++++++|.|++                       
T Consensus       204 ~~ls~~-~~~~~~~~~pfd~~~~g~~~gEGAaalvL~~~~~A~~~g~~i~a~i~g~~-----------------------  259 (407)
T TIGR03150       204 KALSTR-NDDPEKASRPFDKDRDGFVMGEGAGVLVLEELEHAKARGAKIYAEIVGYG-----------------------  259 (407)
T ss_pred             CcccCC-CCCCCcCCCCCcCCCCcEEEeceEEEEEEeeHHHHHHCCCeEEEEEEEEE-----------------------
Confidence            887642 34466789999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...++.....|.+.+.+..++++++|++++++++||||+|
T Consensus       260 ----------------------------------------~~~d~~~~~~~~~~~~~~~~ai~~Al~~Agi~~~dId~ve  299 (407)
T TIGR03150       260 ----------------------------------------MSGDAYHITAPAPEGEGAARAMRAALKDAGINPEDVDYIN  299 (407)
T ss_pred             ----------------------------------------ECCCCCCCCCCCCCcHHHHHHHHHHHHHcCCCHhHCCEEe
Confidence                                                    4455555566666677889999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCC--CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPA--QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~--~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  324 (359)
                      +|++||..+|..|.+++..+|+.  .++||++.|+++||+++|||++++++++++|++++|||++|+++|+|.+...+++
T Consensus       300 ~h~tgt~~~D~~E~~a~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~  379 (407)
T TIGR03150       300 AHGTSTPLGDKAETKAIKRVFGDHAYKLAVSSTKSMTGHLLGAAGAIEAIFTVLAIRDGVVPPTINLDNPDPECDLDYVP  379 (407)
T ss_pred             CcCCCCCCCCHHHHHHHHHHhccCCCCCceeCCcchhchhHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC
Confidence            99999999999999999999984  3799999999999999999999999999999999999999999999999888888


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEe
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~  355 (359)
                      .+..+++   .|++++++|||||+|+|+||+
T Consensus       380 ~~~~~~~---~~~~l~~s~gfgG~n~~~vl~  407 (407)
T TIGR03150       380 NEARERK---IDYALSNSFGFGGHNASLVFK  407 (407)
T ss_pred             CCCccCC---cCEEEEecccCCCceEEEEeC
Confidence            8887777   799999999999999999984

FabB sequences should fall well below the noise cutoff of this model.

>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=1.7e-48  Score=379.94  Aligned_cols=280  Identities=35%  Similarity=0.538  Sum_probs=253.4

Q ss_pred             CcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccc
Q psy5293          11 SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRAL   89 (359)
Q Consensus        11 ~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l   89 (359)
                      .|.++.....+. ++.+|+..+|++||+++|+++| |++.||.+|+++|++|++|++||||+|..+++..+..+..++.+
T Consensus       142 ~~~~~~~~~~~~-~a~~i~~~~gl~G~~~~i~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~d~~~~~~~~~~~~~~~~l  220 (425)
T PRK06501        142 FDALHERFQFGS-IADRLADRFGTRGLPISLSTACASGATAIQLGVEAIRRGETDRALCIATDGSVSAEALIRFSLLSAL  220 (425)
T ss_pred             CChhhhhhcccH-HHHHHHHHhCCCCCceeecCccHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHhhcc
Confidence            345567777888 8999999999999999999999 99999999999999999999999999988899988889888888


Q ss_pred             cccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchh
Q psy5293          90 ATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFV  169 (359)
Q Consensus        90 ~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~  169 (359)
                      +.. .+.|...++|||.+++|+++|||+++++||+.+++.++|++||+++.+++                          
T Consensus       221 s~~-~~~~~~~~rpfd~~r~G~v~GEGaaalVLe~~~~A~~rg~~i~a~i~g~~--------------------------  273 (425)
T PRK06501        221 STQ-NDPPEKASKPFSKDRDGFVMAEGAGALVLESLESAVARGAKILGIVAGCG--------------------------  273 (425)
T ss_pred             ccC-CCCCCcccCCCCCCCCCeeeeccEEEEEECcHHHHHHCCCeEEEEEEEEE--------------------------
Confidence            753 34477899999999999999999999999999999999999999999886                          


Q ss_pred             hcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q psy5293         170 TRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHA  249 (359)
Q Consensus       170 ~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~  249 (359)
                                                           ...++.+...+.+.+....++++++|++++++|+||+|++.|+
T Consensus       274 -------------------------------------~~~d~~~~~~~~~~~~~~~~ai~~AL~~agi~p~dId~i~~Hg  316 (425)
T PRK06501        274 -------------------------------------EKADSFHRTRSSPDGSPAIGAIRAALADAGLTPEQIDYINAHG  316 (425)
T ss_pred             -------------------------------------EccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEEecC
Confidence                                                 4444555555666778889999999999999999999999999


Q ss_pred             CCCCcccHHHHHHHHhhcCC--CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc
Q psy5293         250 TSTPLGDVIELKAIGSLFPA--QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAV  327 (359)
Q Consensus       250 ~~t~~~d~~E~~al~~~~~~--~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~  327 (359)
                      +||..+|..|..+|..+|+.  +.+||++.|+++||+.+|||+++++.++++|++++|||++|+++|+|+++.++++.+.
T Consensus       317 tgt~~~d~~E~~al~~~~~~~~~~~pv~s~k~~~Gh~~~AsG~~~~~~~~l~l~~~~ipp~~n~~~~~~~~~~~~~~~~~  396 (425)
T PRK06501        317 TSTPENDKMEYLGLSAVFGERLASIPVSSNKSMIGHTLTAAGAVEAVFSLLTIQTGRLPPTINYDNPDPAIPLDVVPNVA  396 (425)
T ss_pred             ccCcchHHHHHHHHHHHhcccCCCcEEECCCcccCCCchhhhHHHHHHHHHHHhcCcCCCcCCCCCCCCCCCcccCCCcc
Confidence            99999999999999999973  4699999999999999999999999999999999999999999999999888887665


Q ss_pred             cccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         328 TEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      ..++   .+.+++|||||||+|+++||++++
T Consensus       397 ~~~~---~~~~l~ns~gfgG~n~~~vl~~~~  424 (425)
T PRK06501        397 RDAR---VTAVLSNSFGFGGQNASLVLTAEP  424 (425)
T ss_pred             cCCC---CCEEEEeCccCCCeeEEEEEecCC
Confidence            5544   799999999999999999999986

>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=100.00  E-value=6.6e-49  Score=415.30  Aligned_cols=278  Identities=34%  Similarity=0.508  Sum_probs=257.0

Q ss_pred             CCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhc
Q psy5293           9 TLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVR   87 (359)
Q Consensus         9 ~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~   87 (359)
                      ...+|.......++ ++++||+.|+++||+++|+++| |+|.|+++||+.|+.|+||++|+||++.+.++...+.+...+
T Consensus       139 ~~~~~~~~g~~~~~-~a~Risy~l~l~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g  217 (1061)
T COG3321         139 AEPEYAITGNSSSV-AAGRISYVLGLSGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGG  217 (1061)
T ss_pred             cccceecccchhhH-HHHHHHHHhcCCCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeeccc
Confidence            34567777777788 9999999999999999999999 999999999999999999999999999999999999999999


Q ss_pred             cccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293          88 ALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus        88 ~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                      +++      |++.|++||.+.+|++.|||+++++|++..+|.++||+||++|+|++                        
T Consensus       218 ~ls------~~g~c~~fd~~adG~v~geG~g~vvLKrl~~A~~dgd~IyavI~gsa------------------------  267 (1061)
T COG3321         218 MLS------PDGRCKAFDADADGYVRGEGAGVVVLKRLSDAERDGDRIYAVIRGSA------------------------  267 (1061)
T ss_pred             CcC------CCCcceecccCCCCEEEeeeEEEEEEEEhHHHHhCCCeEEEEEEeee------------------------
Confidence            998      89999999999999999999999999999999999999999999987                        


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCC--ccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEE
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDG--HHLTSPREDGRGALLAMTRALIDANLSPGDISYI  245 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~--~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~i  245 (359)
                                                             .+.|+  ...+.|  +..+..++++++|+++++.|++|+|+
T Consensus       268 ---------------------------------------vn~dG~~~gltaP--~~~aQ~~v~~~al~~a~i~p~tv~yv  306 (1061)
T COG3321         268 ---------------------------------------VNQDGRSNGLTAP--NLEAQADVIREALADAGIDPATVQYV  306 (1061)
T ss_pred             ---------------------------------------eccCCCcCCCCCC--CHHHHHHHHHHHHHhcCCCcccCcEE
Confidence                                                   33333  233444  44778899999999999999999999


Q ss_pred             EeccCCCCcccHHHHHHHHhhcC----CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC--
Q psy5293         246 NAHATSTPLGDVIELKAIGSLFP----AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG--  319 (359)
Q Consensus       246 e~h~~~t~~~d~~E~~al~~~~~----~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~--  319 (359)
                      |.|+|||..+|++|+++|..+|+    ...+.+++.|+|+||+..|+|+++++|++++|++++|||++|++.|+|.++  
T Consensus       307 EaHgTGT~lGDpiE~~aL~~v~~~~~~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~  386 (1061)
T COG3321         307 EAHGTGTPLGDPIEANALGAVYGEGAPAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFD  386 (1061)
T ss_pred             EecCCCCCCcCHHHHHHHHHHhccCCCCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccc
Confidence            99999999999999999999998    567889999999999999999999999999999999999999999999986  


Q ss_pred             --CCCCCCcccccccC-CccEEEEeCcCcCcceeeEEEeecC
Q psy5293         320 --GYECPTAVTEWKTD-GRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       320 --~~~~~~~~~~~~~~-~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                        .++++.+.++|+.. .+|++.|++||++|+|+|+|||+++
T Consensus       387 ~sp~~v~~~~~~W~~~~~prrAgvssfG~gGtNaHvIlEe~~  428 (1061)
T COG3321         387 SSPFVVPTEATPWPTGGGPRRAGVSSFGFGGTNAHVILEEAP  428 (1061)
T ss_pred             cCCeEeecCCcCCCCCCCCceeeeeccCCCCCceEEEEeecC
Confidence              56788999999876 7899999999999999999999986

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=100.00  E-value=4.8e-48  Score=376.40  Aligned_cols=278  Identities=36%  Similarity=0.544  Sum_probs=253.2

Q ss_pred             CCCcccccccCC--ChHHHHHHHHHcCC-Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHH
Q psy5293           9 TLSPYFVNPFFP--NMVPAGAISIDMDS-KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFC   84 (359)
Q Consensus         9 ~~~~~~~~~~~~--~~~~a~~ia~~~g~-~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~   84 (359)
                      .++|+.++..++  |+ ++++|++.+|+ +||+++|+++| |++.||..|+++|++|++|++||||+|.+. +..+..|.
T Consensus       124 ~~~~~~~~~~~~~~~~-~a~~is~~~gl~~Gp~~tv~~aCaS~~~Al~~A~~~I~~G~~d~~lvgg~d~~~-~~~~~~f~  201 (407)
T cd00828         124 AVNPYVSPKWMLSPNT-VAGWVNILLLSSHGPIKTPVGACATALEALDLAVEAIRSGKADIVVVGGVEDPL-EEGLSGFA  201 (407)
T ss_pred             ccCCcccchhccccch-HHHHHHHHhCcCCCCCcCcccHHHHHHHHHHHHHHHHHcCCCCEEEEccccccC-hHHHHHHH
Confidence            467888888888  99 99999999999 99999999999 999999999999999999999999999977 87888888


Q ss_pred             hhccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhccccccc
Q psy5293          85 RVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKL  164 (359)
Q Consensus        85 ~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  164 (359)
                      .++.++.. .++|...++|||.+++|+++|||+++++||+.+++.++|++||++|.|++                     
T Consensus       202 ~~~~ls~~-~~~~~~~~~pfd~~~~G~~~gEGAaalvLe~~~~A~~rg~~i~a~i~g~~---------------------  259 (407)
T cd00828         202 NMGALSTA-EEEPEEMSRPFDETRDGFVEAEGAGVLVLERAELALARGAPIYGRVAGTA---------------------  259 (407)
T ss_pred             HcCCCCCC-CCCCCcccCCCcCCCCcEEeecceEEEEEeeHHHHHHCCCeEEEEEEEEE---------------------
Confidence            99888753 23366889999999999999999999999999999999999999999987                     


Q ss_pred             CcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccE
Q psy5293         165 SPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISY  244 (359)
Q Consensus       165 ~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~  244 (359)
                                                                ...++.+...+. .+.+..++++++|++++++|+||||
T Consensus       260 ------------------------------------------~~~d~~~~~~~~-~~~~~~~a~~~Al~~Agi~~~dId~  296 (407)
T cd00828         260 ------------------------------------------STTDGAGRSVPA-GGKGIARAIRTALAKAGLSLDDLDV  296 (407)
T ss_pred             ------------------------------------------eccCCCCCCCCC-ChHHHHHHHHHHHHHcCCCHHHcCE
Confidence                                                      444455444444 5688899999999999999999999


Q ss_pred             EEeccCCCCcccHHHHHHHHhhcCC--CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCC
Q psy5293         245 INAHATSTPLGDVIELKAIGSLFPA--QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE  322 (359)
Q Consensus       245 ie~h~~~t~~~d~~E~~al~~~~~~--~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~  322 (359)
                      ++.|++||..+|..|.+++..+|+.  ..++|++.|+++||+.+|||++++++++++|++++|||++|+++++|+++..+
T Consensus       297 i~~hgtgt~~~D~~E~~ai~~~~~~~~~~~~v~s~K~~~Gh~~~Asg~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~  376 (407)
T cd00828         297 ISAHGTSTPANDVAESRAIAEVAGALGAPLPVTAQKALFGHSKGAAGALQLIGALQSLEHGLIPPTANLDDVDPDVEHLS  376 (407)
T ss_pred             EecccccCccccHHHHHHHHHHHhccCCCceeecccchhccchhhhhHHHHHHHHHHHhcCccCCCCCCCCCCccccccc
Confidence            9999999999999999999999984  37899999999999999999999999999999999999999999999998888


Q ss_pred             CCCcccccccCCccEEEEeCcCcCcceeeEEE
Q psy5293         323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCI  354 (359)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il  354 (359)
                      ++++.++|+.. .|.+++|+|||||+|+++||
T Consensus       377 ~~~~~~~~~~~-~~~al~~s~gfgG~n~~lv~  407 (407)
T cd00828         377 VVGLSRDLNLK-VRAALVNAFGFGGSNAALVL  407 (407)
T ss_pred             ccCcCccCCCC-ccEEEEecccCCCcceEEEC
Confidence            98888888733 59999999999999999986

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=100.00  E-value=1.6e-47  Score=372.60  Aligned_cols=279  Identities=54%  Similarity=0.836  Sum_probs=256.5

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.+..+++|. ++++|+..||++||+++|+.+| |++.||..|+++|++|++|.+||+|+|.++.+..+..+..+
T Consensus       125 ~~~~~~~~~~~~~~~-~a~~ia~~lgl~g~~~~v~~acas~~~Al~~A~~~i~~G~~d~aLvgg~d~~~~p~~~~~~~~~  203 (406)
T cd00834         125 RRVSPFFVPMALPNM-AAGQVAIRLGLRGPNYTVSTACASGAHAIGDAARLIRLGRADVVIAGGAEALITPLTLAGFAAL  203 (406)
T ss_pred             cccChhHHhhhcccH-HHHHHHHHhCCCCcccccchHHHHHHHHHHHHHHHHHcCCCCEEEEcCcccccCHHHHHHHHhc
Confidence            568899999999999 9999999999999999999999 99999999999999999999999999998889999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.. ..+|...++||+.+++|++++||+++++|++.+++.+++++++++|.+.+                       
T Consensus       204 ~~l~~~-~~~p~~~~~pf~~~~~g~~~geGA~a~vL~~~~~A~~~g~~~~a~i~g~~-----------------------  259 (406)
T cd00834         204 RALSTR-NDDPEKASRPFDKDRDGFVLGEGAGVLVLESLEHAKARGAKIYAEILGYG-----------------------  259 (406)
T ss_pred             CCcCCC-CCCCccCCCCCCCCCCCEeeeccEEEEEEecHHHHHHCCCeEEEEEEEEE-----------------------
Confidence            988754 22366789999999999999999999999999999999999999999887                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...++.....|.+.+.+..++++++|++++++++||||++
T Consensus       260 ----------------------------------------~~~d~~~~~~~~~~~~~~~~~i~~al~~agi~~~dId~v~  299 (406)
T cd00834         260 ----------------------------------------ASSDAYHITAPDPDGEGAARAMRAALADAGLSPEDIDYIN  299 (406)
T ss_pred             ----------------------------------------ecccCCCCCCCCCCcHHHHHHHHHHHHHcCCCHHHCCEEe
Confidence                                                    4444555556666678889999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCC--CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPA--QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~--~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  324 (359)
                      .|++||+.+|..|.+++..+|+.  .+++|++.|+++||+++|||++++++++++|++++|||+.|+++|+|..+...++
T Consensus       300 ~h~tgt~~~d~~E~~al~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  379 (406)
T cd00834         300 AHGTSTPLNDAAESKAIKRVFGEHAKKVPVSSTKSMTGHLLGAAGAVEAIATLLALRDGVLPPTINLEEPDPECDLDYVP  379 (406)
T ss_pred             cccccCccccHHHHHHHHHHhcccCCCCceeCcchhhccchhhhhHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC
Confidence            99999999999999999999985  4899999999999999999999999999999999999999999999988877888


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEE
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCI  354 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il  354 (359)
                      .+..+|+   .|++++|+|||||+|+|+||
T Consensus       380 ~~~~~~~---~~~~l~~s~g~gG~n~~~vl  406 (406)
T cd00834         380 NEAREAP---IRYALSNSFGFGGHNASLVF  406 (406)
T ss_pred             CCCcccc---ccEEEEeeecCCceeeEEEC
Confidence            7888888   69999999999999999986

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=100.00  E-value=1.4e-46  Score=365.36  Aligned_cols=277  Identities=34%  Similarity=0.476  Sum_probs=242.8

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..+.|++....+++. ++++|++.||++||+++++++| |++.||..|+++|++|++|++||+|+|..+++.....+..+
T Consensus       131 ~~~~p~~~~~~~~~~-~a~~ia~~lgl~G~~~tv~~acas~~~Al~~A~~~I~~G~~d~~lv~g~~~~~~~~~~~~~~~~  209 (410)
T PRK07103        131 AFLRPSYGLSFMDTD-LVGLCSEQFGIRGEGFTVGGASASGQLAVIQAARLVQSGSVDACIAVGALMDLSYWECQALRSL  209 (410)
T ss_pred             cccChhhhhhhcchH-HHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccccCCHHHHHHHHHc
Confidence            567888888888998 9999999999999999999999 99999999999999999999999999987889888888888


Q ss_pred             cccccc-CCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccC
Q psy5293          87 RALATQ-FNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLS  165 (359)
Q Consensus        87 ~~l~~~-~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  165 (359)
                      +.++.. +..+|...++|||.+++|+++|||+++++|++.+++.++|++++++|.|++                      
T Consensus       210 ~~l~~~~~~~~p~~~~rPfd~~~dG~v~gEGaaalvLe~~~~A~~~g~~i~a~I~g~~----------------------  267 (410)
T PRK07103        210 GAMGSDRFADEPEAACRPFDQDRDGFIYGEACGAVVLESAESARRRGARPYAKLLGWS----------------------  267 (410)
T ss_pred             cccccCccCCCcccCcCCCCCCCCCeeEeeeEEEEEEccHHHHHHCCCceEEEEEEEE----------------------
Confidence            887632 234678899999999999999999999999999999999999999999987                      


Q ss_pred             cchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEE
Q psy5293         166 PYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYI  245 (359)
Q Consensus       166 p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~i  245 (359)
                                                               ...++.+...|  ...+..++++++|++++++|+||||+
T Consensus       268 -----------------------------------------~~~d~~~~~~p--~~~~~~~a~~~Al~~Agi~~~dId~v  304 (410)
T PRK07103        268 -----------------------------------------MRLDANRGPDP--SLEGEMRVIRAALRRAGLGPEDIDYV  304 (410)
T ss_pred             -----------------------------------------EecCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHCCEE
Confidence                                                     44445554443  44667899999999999999999999


Q ss_pred             EeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCC-CccCCCCCCC
Q psy5293         246 NAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDP-CEEAGGYECP  324 (359)
Q Consensus       246 e~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~-~~~~~~~~~~  324 (359)
                      +.|++||+.+|..|.++|... +...+||++.|+++||+.+|||++++++++++|++++|||++|+++| +|.+  .+++
T Consensus       305 ~~hgtgt~~~D~~E~~al~~~-~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~l~l~~~~ipp~~~~~~~~~~~~--~~v~  381 (410)
T PRK07103        305 NPHGTGSPLGDETELAALFAS-GLAHAWINATKSLTGHGLSAAGIVELIATLLQMRAGFLHPSRNLDEPIDERF--RWVG  381 (410)
T ss_pred             EccCCCCCCCCHHHHHHHhcC-CCCCCeEECCCcccccCchhhhHHHHHHHHHHHhCCeeCCCCCCCCCCCCCc--CccC
Confidence            999999999999999999432 24579999999999999999999999999999999999999999988 5543  3444


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                      .+....   ..|++++|+|||||+|+++||++
T Consensus       382 ~~~~~~---~~~~~l~~s~gfGG~n~~~vl~~  410 (410)
T PRK07103        382 STAESA---RIRYALSLSFGFGGINTALVLER  410 (410)
T ss_pred             CCCcCC---CCCEEEEecccCCCceEEEEEeC
Confidence            433322   37999999999999999999985

>smart00825 PKS_KS Beta-ketoacyl synthase

Probab=100.00  E-value=7.9e-46  Score=362.70  Aligned_cols=280  Identities=31%  Similarity=0.474  Sum_probs=250.6

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..+.|+.+..++.|. .+.+|+..+|++||+++|+++| |++.||..|+++|++|++|++||+|+|.+.++..+..+...
T Consensus       134 ~~~~~~~~~~~~~~~-~a~~i~~~lgl~g~~~~v~~acasg~~Al~~A~~~I~~G~~d~vlvgg~~~~~~~~~~~~~~~~  212 (424)
T smart00825      134 EDIEGYAATGTARSF-IANRISYFFDLRGPSVTVDTACSSSLVALHLACQSLRSGECDMALAGGVNLILSPDTFVGFSRA  212 (424)
T ss_pred             cccchhhhccchhHH-HHHHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeecCCHHHHHHHhhc
Confidence            567888888888998 9999999999999999999999 99999999999999999999999999998888888888888


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++      +++.++||+.+++|+++|||+++++|++.+++.+++++++++|.+++                       
T Consensus       213 ~~l~------~~~~~~pf~~~~~g~~~geGAaalVLe~~e~A~~~g~~i~a~I~g~~-----------------------  263 (424)
T smart00825      213 GMLS------PDGRCKTFDADADGYVRGEGVGVVVLKRLSDALRDGDPILAVIRGSA-----------------------  263 (424)
T ss_pred             CCCC------CCCCCCCCCCCCCcccccceEEEEEEccHHHHHHCCCeEEEEEEEEE-----------------------
Confidence            8776      66789999999999999999999999999999999999999999986                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...++.......+......++++++|++++++++|||+++
T Consensus       264 ----------------------------------------~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~dId~i~  303 (424)
T smart00825      264 ----------------------------------------VNQDGRSNGLTAPSGPAQARLIRQALARAGVDPADVDYVE  303 (424)
T ss_pred             ----------------------------------------EeCCCCCCCCCCcCHHHHHHHHHHHHHHhCCCHHHccEEE
Confidence                                                    2223332222234557778999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCC-----CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPA-----QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY  321 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~-----~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~  321 (359)
                      .|++||..+|..|.++|..+|+.     .+++|++.|+++||+.+|||++++++++++|++++|||++|+++|+|.+...
T Consensus       304 ~h~tgt~~~d~~E~~al~~~~~~~~~~~~~~~v~s~k~~~Gh~~~AsG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~  383 (424)
T smart00825      304 AHGTGTPLGDPIEAEALAAVFGQGRPRDGPLLLGSVKSNIGHLEAAAGVAGLIKVVLALRHGTIPPTLHFETPNPHIDLE  383 (424)
T ss_pred             eeCCCCCCCCHHHHHHHHHHHhccCCCCCceEEeccccccCCcccchhHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCcc
Confidence            99999999999999999999973     4689999999999999999999999999999999999999999999988754


Q ss_pred             ----CCCCccccccc-CCccEEEEeCcCcCcceeeEEEeec
Q psy5293         322 ----ECPTAVTEWKT-DGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       322 ----~~~~~~~~~~~-~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                          +++.+..+|+. ..+|++++|+|||||+|+++||++|
T Consensus       384 ~~~~~~~~~~~~~~~~~~~~~~l~~s~gfgg~n~~lvl~~~  424 (424)
T smart00825      384 ESPLRVPTEATPWPATGRPRRAGVSSFGFGGTNAHVILEEA  424 (424)
T ss_pred             cCceEccCCCcCCCCCCCccEEEEeccCCCCceEEEEEecC
Confidence                67778887752 3479999999999999999999986

The structure of beta-ketoacyl synthase is similar to that of the thiolase family and also chalcone synthase. The active site of beta-ketoacyl synthase is located between the N and C-terminal domains.

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=100.00  E-value=1.5e-44  Score=349.21  Aligned_cols=264  Identities=34%  Similarity=0.547  Sum_probs=235.1

Q ss_pred             CcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccc
Q psy5293          11 SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRAL   89 (359)
Q Consensus        11 ~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l   89 (359)
                      .++.+..+.+|+ ++++|++.||++||+++++++| |++.||..|+++|++|++|.+||+|+|. ..+.....+..++.+
T Consensus       127 ~~~~~~~~~~~~-~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~A~~~I~~G~~d~vlvgg~d~-~~~~~~~~~~~~~~l  204 (392)
T PRK09185        127 ADYHYAQQELGS-LADFLRAYLGLSGPAYTISTACSSSAKVFASARRLLEAGLCDAAIVGGVDS-LCRLTLNGFNSLESL  204 (392)
T ss_pred             CchhhhhhcccH-HHHHHHHHhCCCCCcccccChhHHHHHHHHHHHHHHHcCCCCEEEEeeccc-cChHHHHHHHhcccc
Confidence            567778889999 9999999999999999999999 9999999999999999999999999997 555566667777766


Q ss_pred             cccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchh
Q psy5293          90 ATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFV  169 (359)
Q Consensus        90 ~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~  169 (359)
                      +       .+.++|||.+++|++++||+++++|++.     ++..  .+|.|++                          
T Consensus       205 ~-------~~~~~Pfd~~~~G~~~gEGaa~vVLe~~-----~~~~--~~I~g~g--------------------------  244 (392)
T PRK09185        205 S-------PQPCRPFSANRDGINIGEAAAFFLLERE-----DDAA--VALLGVG--------------------------  244 (392)
T ss_pred             C-------CCccCCCcCCCCccceeceEEEEEEEEc-----CCCc--EEEEEEE--------------------------
Confidence            5       2579999999999999999999999986     2333  3567765                          


Q ss_pred             hcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q psy5293         170 TRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHA  249 (359)
Q Consensus       170 ~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~  249 (359)
                                                           ...|+.+...|++.+.+..++++++|++++++|+||||+++|+
T Consensus       245 -------------------------------------~~~d~~~~~~~~~~~~~~~~a~~~Al~~Agl~~~dId~v~~hg  287 (392)
T PRK09185        245 -------------------------------------ESSDAHHMSAPHPEGLGAILAMQQALADAGLAPADIGYINLHG  287 (392)
T ss_pred             -------------------------------------EeCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEEeCC
Confidence                                                 4445555566777778889999999999999999999999999


Q ss_pred             CCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccc
Q psy5293         250 TSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTE  329 (359)
Q Consensus       250 ~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~  329 (359)
                      +||+.+|..|..+|.++|+. .+||++.|+++||+++|||+++++.++++|++|++||++|+++++|+++..+++.+..+
T Consensus       288 tgt~~~D~~E~~al~~~f~~-~~pv~s~K~~~Gh~~~AaG~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~  366 (392)
T PRK09185        288 TATPLNDAMESRAVAAVFGD-GVPCSSTKGLTGHTLGAAGAVEAAICWLALRHGLPPHGWNTGQPDPALPPLYLVENAQA  366 (392)
T ss_pred             CCCcCCCHHHHHHHHHHhCC-CCceeCCCcccccChhhcchHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccCCCCcc
Confidence            99999999999999999974 57899999999999999999999999999999999999999999999998888887776


Q ss_pred             cccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         330 WKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       330 ~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      ++   +|++++|+|||||+|+++||++-
T Consensus       367 ~~---~~~~l~~s~gfgG~n~~lvl~~~  391 (392)
T PRK09185        367 LA---IRYVLSNSFAFGGNNCSLIFGRA  391 (392)
T ss_pred             CC---CCEEEEeCccCCceeEEEEEEeC
Confidence            65   89999999999999999999874

>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations

Probab=100.00  E-value=4.9e-44  Score=349.70  Aligned_cols=276  Identities=33%  Similarity=0.529  Sum_probs=248.0

Q ss_pred             CCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhc
Q psy5293           9 TLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVR   87 (359)
Q Consensus         9 ~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~   87 (359)
                      .++|+.+...++|. +++++++.+|++||+++++++| |++.||..|+++|++|++|++||+|+|.+.++.....+..++
T Consensus       135 ~~~~~~~~~~~~~~-~a~~i~~~~gl~g~~~~v~~acas~~~Al~~A~~~I~~G~~d~~lvgg~~~~~~~~~~~~~~~~~  213 (421)
T cd00833         135 EIDAYAATGTSRAF-LANRISYFFDLRGPSLTVDTACSSSLVALHLACQSLRSGECDLALVGGVNLILSPDMFVGFSKAG  213 (421)
T ss_pred             ccCcccccCcchHH-HHHHHHHHcCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeeeeccCCHHHHHHHhhCC
Confidence            47899999999998 9999999999999999999999 999999999999999999999999999988888888888888


Q ss_pred             cccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293          88 ALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus        88 ~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                      .++      +...++||+.+++|++++||+++++|++.+.+.+++++++++|.|++                        
T Consensus       214 ~l~------~~~~~~pf~~~~~g~~~geGAaalvL~~~~~A~~~g~~~~a~i~g~~------------------------  263 (421)
T cd00833         214 MLS------PDGRCRPFDADADGYVRGEGVGVVVLKRLSDALRDGDRIYAVIRGSA------------------------  263 (421)
T ss_pred             CCC------CCCCCCCCCCCCCCeeeeceEEEEEEeeHHHHHHCCCeEEEEEEEEE------------------------
Confidence            877      55679999999999999999999999999999999999999999886                        


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA  247 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~  247 (359)
                                                             ...++.....+.+...+..++++++|+++|++++||||++.
T Consensus       264 ---------------------------------------~~~~~~~~~~~~p~~~~~~~a~~~al~~Agi~~~did~i~~  304 (421)
T cd00833         264 ---------------------------------------VNQDGRTKGITAPSGEAQAALIRRAYARAGVDPSDIDYVEA  304 (421)
T ss_pred             ---------------------------------------EcCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHCcEEEe
Confidence                                                   32333322223335678889999999999999999999999


Q ss_pred             ccCCCCcccHHHHHHHHhhcCC-----CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC---
Q psy5293         248 HATSTPLGDVIELKAIGSLFPA-----QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG---  319 (359)
Q Consensus       248 h~~~t~~~d~~E~~al~~~~~~-----~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~---  319 (359)
                      |+++|..+|..|.+++..+|+.     ..+++++.|+++||+.+|+|+++++.++++|+++.+||++|+++++|.+.   
T Consensus       305 hgtgt~~~D~~E~~al~~~f~~~~~~~~~~~v~s~k~~~Gh~~~aag~~~l~~~~~~l~~~~ip~~~~~~~~~~~~~~~~  384 (421)
T cd00833         305 HGTGTPLGDPIEVEALAKVFGGSRSADQPLLIGSVKSNIGHLEAAAGLAGLIKVVLALEHGVIPPNLHFETPNPKIDFEE  384 (421)
T ss_pred             eCCCCCCCCHHHHHHHHHHHhccCCCCCceeeecCcCccccchhhhHHHHHHHHHHHHhcCCcCCcCCCCCCCCCCCccc
Confidence            9999999999999999999974     36899999999999999999999999999999999999999999999886   


Q ss_pred             -CCCCCCcccccccC-CccEEEEeCcCcCcceeeEEE
Q psy5293         320 -GYECPTAVTEWKTD-GRRVALKNSFGFGGTNACLCI  354 (359)
Q Consensus       320 -~~~~~~~~~~~~~~-~~~~~~~~~~g~gG~~~~~il  354 (359)
                       .++++++..+|+.. ++|++++|+|||||.|+++||
T Consensus       385 ~~~~~~~~~~~~~~~~~~~~~~~~sfgfgg~n~~~vl  421 (421)
T cd00833         385 SPLRVPTEARPWPAPAGPRRAGVSSFGFGGTNAHVIL  421 (421)
T ss_pred             CCeEeeCCCccCCCCCCCeEEEEeCcCCCCceeEEeC
Confidence             34677888777643 479999999999999999986

PKSs can be divided into 2 groups, modular type I PKSs consisting of one or more large multifunctional proteins and iterative type II PKSs, complexes of several monofunctional subunits.

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=100.00  E-value=2e-42  Score=332.70  Aligned_cols=253  Identities=24%  Similarity=0.224  Sum_probs=223.2

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|++++.+++|+ ++++|++.+|++||+++|+++| ||+.||.+|+++|++|++|++||||+|..+++..+..|..+
T Consensus       139 ~~~~p~~~~~~~~n~-~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A~~~I~~G~~d~~lvGG~d~~~~~~~~~~~~~~  217 (398)
T PRK06519        139 TELRPTLFLAQLSNL-LAGNISIVHKVTGSSRTFMGEESAGVSAIEIAFARIASGQSDHALVGGAYNAERPDMLLLYELG  217 (398)
T ss_pred             CccChhhhhhhhhhH-HHHHHHHHhCCCCccccccCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHc
Confidence            678999999999999 9999999999999999999999 99999999999999999999999999998899888889999


Q ss_pred             ccccccCCCCCCCCCCC-ccC---CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhccccc
Q psy5293          87 RALATQFNNEPAQASRP-FDK---RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYN  162 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~-fd~---~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~  162 (359)
                      +.++.       ..++| ||.   +++|+++|||+++++||+.+++.+||++||++|.|++                   
T Consensus       218 ~~ls~-------~~~~p~~d~~~~~r~G~v~GEGAa~lvLE~~~~A~~Rga~i~AeI~G~~-------------------  271 (398)
T PRK06519        218 GLLLK-------GGWAPVWSRGGEDGGGFILGSGGAFLVLESREHAEARGARPYARISGVE-------------------  271 (398)
T ss_pred             CccCC-------CCCCchhccCccCCCCeeeeceEEEEEEeeHHHHHhCCCceEEEEEEEe-------------------
Confidence            88873       23445 454   6999999999999999999999999999999999875                   


Q ss_pred             ccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCc
Q psy5293         163 KLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDI  242 (359)
Q Consensus       163 ~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI  242 (359)
                                                                  ..  ..    +. ...+..++|+++|+++++ ++||
T Consensus       272 --------------------------------------------~d--~~----~~-~~~~~~~am~~AL~~Agl-~~~I  299 (398)
T PRK06519        272 --------------------------------------------SD--RA----RR-APGDLEASLERLLKPAGG-LAAP  299 (398)
T ss_pred             --------------------------------------------ec--CC----CC-ChHHHHHHHHHHHHHCCC-cccC
Confidence                                                        11  11    11 225778999999999999 8999


Q ss_pred             cEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCC
Q psy5293         243 SYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE  322 (359)
Q Consensus       243 ~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~  322 (359)
                      |||+.|+|||+.+|..|..+|..+|+   +||++.|+.+||+++|+|+++++.++++|++|+|||++|++   |+     
T Consensus       300 dyI~ahgtgT~~~D~~E~~Ai~~~f~---~pvsS~Ks~~GH~l~AAGa~e~i~~~lal~~g~vpp~~n~~---~~-----  368 (398)
T PRK06519        300 TAVISGATGAHPATAEEKAALEAALA---GPVRGIGTLFGHTMEAQFPLGLALAALSVSKGALFPPFDAS---GE-----  368 (398)
T ss_pred             CEEEeCCCCCCCccHHHHHHHHHHcC---CCccccchhhccchHHHHHHHHHHHHHHHhcCccCCCCCCC---cc-----
Confidence            99999999999999999999999995   68999999999999999999999999999999999999972   22     


Q ss_pred             CCCcccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                         ++.+.+   .+.++++++|++|.-.-.+++.
T Consensus       369 ---~~~~~~---~~~~~~~~~~~~~~~~~~~~~~  396 (398)
T PRK06519        369 ---KPMSGA---AREAVVTTVGHWRGEGMALVEA  396 (398)
T ss_pred             ---cCcccc---ccEEEEEeeccCCcceeEEEEe
Confidence               222223   7899999999999877777664

>KOG1202|consensus

Probab=100.00  E-value=3.8e-41  Score=336.75  Aligned_cols=274  Identities=27%  Similarity=0.423  Sum_probs=242.9

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..+.-|...+..+.| .+.+|++.|+++||++.++++| |++.|+..|++.|++|+||.+||+|+...+.|.....|-++
T Consensus       134 ~t~~Gy~mtgc~raM-faNRiSytFDfqGPS~s~DtacsSsl~al~~a~~~~r~gqcd~AiVaG~~liLkPt~slQFlRL  212 (2376)
T KOG1202|consen  134 DTVNGYSMTGCVRAM-FANRISYTFDFQGPSFSVDTACSSSLMALQNAFQDIRSGQCDAAIVAGANLILKPTTSLQFLRL  212 (2376)
T ss_pred             ccccceeecccHHHH-hhcceeEEEeccCCchhhhhhhHHHHHHHHHHHHhhhccCCchhhhcccceEeccchhhHHHHh
Confidence            457778888888999 9999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      |+++      |++-|+.||...+||...||+.++.+++...|.    |+|+.|....                       
T Consensus       213 gmls------~dGsCkaFDeagnGY~Rseg~~avllqrk~~Ar----RvYAtilnar-----------------------  259 (2376)
T KOG1202|consen  213 GMLS------PDGSCKAFDEAGNGYCRSEGVVAVLLQRKSLAR----RVYATILNAR-----------------------  259 (2376)
T ss_pred             cCcC------CCCcccchhccCCceeecCceEEEEEehhHHHH----HHHHHhhccc-----------------------
Confidence            9999      899999999999999999999999999988876    5566665544                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCcc-CCCCCcChHHHHHHHHHHHHHcCCCCCCccEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHH-LTSPREDGRGALLAMTRALIDANLSPGDISYI  245 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~-~~~p~~~~~~~~~a~~~al~~agl~~~dI~~i  245 (359)
                                                              .+.|+.. .-..-|.+....+.+++.|+++|++|+++-|+
T Consensus       260 ----------------------------------------tNTDGfKEqGvTfP~G~~Q~qLi~e~Yse~Gl~P~sv~Yv  299 (2376)
T KOG1202|consen  260 ----------------------------------------TNTDGFKEQGVTFPSGDMQEQLIRETYSEAGLNPESVVYV  299 (2376)
T ss_pred             ----------------------------------------cCCCchhhcCccCCCcHHHHHHHHHHHHhcCCCcccEEEE
Confidence                                                    1112211 11112356777889999999999999999999


Q ss_pred             EeccCCCCcccHHHHHHHHhhcC---CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC---
Q psy5293         246 NAHATSTPLGDVIELKAIGSLFP---AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG---  319 (359)
Q Consensus       246 e~h~~~t~~~d~~E~~al~~~~~---~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~---  319 (359)
                      |.||+||+.+|+-|+.++...|+   ..++-|++.|+|+||++.|||+..+++.++.|++|.|||++|+..|+|++.   
T Consensus       300 EAHGtGTkVGDpQEaN~it~~fC~~Rt~pLLIGSvKSNMGHaEPASGv~alaKillsmE~glip~NLHy~tPNp~ip~L~  379 (2376)
T KOG1202|consen  300 EAHGTGTKVGDPQEANGITRFFCATRTTPLLIGSVKSNMGHAEPASGVCALAKILLSMEEGLIPPNLHYNTPNPEIPALV  379 (2376)
T ss_pred             EeccCCCCCCChHHhhhHHHHHhhcCCCceEeeeccccCCCCCccchHHHHHHHHHHHHhCcCCCccccCCCCCCcchhc
Confidence            99999999999999999999998   457889999999999999999999999999999999999999999999985   


Q ss_pred             --CCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         320 --GYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       320 --~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                        ...|..++.+|+   .-+..+|||||||.|+|+||+..+
T Consensus       380 dGrLkVVd~~lp~~---GGivGiNSFGFGGsN~HviLks~~  417 (2376)
T KOG1202|consen  380 DGRLKVVDRPLPWR---GGIVGINSFGFGGSNAHVILKSNT  417 (2376)
T ss_pred             cceeEEecCCCCcc---CceeeeeccccCCCceeEEeccCC
Confidence              344778888898   678899999999999999998753

>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction

Probab=100.00  E-value=8.2e-34  Score=268.91  Aligned_cols=272  Identities=36%  Similarity=0.511  Sum_probs=229.7

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..+.|+.+...+.+. ++++|+..+|++||+++|+.+| |++.||..|+++|++|++|.+||+|+|.+..++........
T Consensus        60 ~~~~~~~~~~~~~~~-~a~~ia~~lgl~g~~~~v~~~cas~~~al~~A~~~i~~g~~~~~Lv~~~d~~~~~~~~~~~~~~  138 (332)
T cd00825          60 RAVGPYVVTKAMFPG-ASGQIATPLGIHGPAYDVSAACAGSLHALSLAADAVQNGKQDIVLAGGSEELAAPMDCEFDAMG  138 (332)
T ss_pred             cccCcchhhcccchH-HHHHHHHHhCCCCCccccccHhHHHHHHHHHHHHHHHcCCCCEEEEeccccccCHHHHHHHhhc
Confidence            567899999999998 8999999999999999999999 99999999999999999999999999987766544322222


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +..      .|++.++||+...+|+++|||+++++|++.+.+.+++.++++++.+.+                       
T Consensus       139 ~~~------~~~~~~~~~~~~~~g~~~gdGaaA~vL~~~~~a~~~~~~~~~~i~~~~-----------------------  189 (332)
T cd00825         139 ALS------TPEKASRTFDAAADGFVFGDGAGALVVEELEHALARGAHIYAEIVGTA-----------------------  189 (332)
T ss_pred             ccc------CCCCCCCCCCCCCCCEEEEeeEEEEEECcHHHHHHCCCeEEEEEEEEE-----------------------
Confidence            222      267788999999999999999999999999999999999999998875                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...++.....+.+......++++++|++++++++|||+++
T Consensus       190 ----------------------------------------~~~~~~~~~~~~~~~~~~~~~i~~al~~agl~~~did~~~  229 (332)
T cd00825         190 ----------------------------------------ATIDGAGMGAFAPSAEGLARAAKEALAVAGLTVWDIDYLV  229 (332)
T ss_pred             ----------------------------------------EccCCCCCCCCCcCHHHHHHHHHHHHHHcCCCHhHCCEEE
Confidence                                                    1111111111233446778899999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTA  326 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~  326 (359)
                      .|+++++..|..|.+++...++...+++...|..+||+.+|++++++++++++++++.+||+.|+.++++  ....+..+
T Consensus       230 ~h~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~G~~~aas~~~~l~~~~~~~~~~~~p~~~~~~~~~~--~~~~~~~~  307 (332)
T cd00825         230 AHGTGTPIGDVKELKLLRSEFGDKSPAVSATKAMTGNLSSAAVVLAVDEAVLMLEHGFIPPSIHIEELDE--AGLNIVTE  307 (332)
T ss_pred             ccCCCCCCCCHHHHHHHHHHhCCCCceeECCCcccccchhHhHHHHHHHHHHHHhcCccCCCCCCCCCCc--ccCcccCC
Confidence            9999999999999999988876556889999999999999999999999999999999999999999988  33344444


Q ss_pred             ccccccCCccEEEEeCcCcCcceeeEEE
Q psy5293         327 VTEWKTDGRRVALKNSFGFGGTNACLCI  354 (359)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~gG~~~~~il  354 (359)
                      ...   ...++++++++|+||+++++||
T Consensus       308 ~~~---~~~~~~l~~~~G~Gg~~~~~vl  332 (332)
T cd00825         308 TTP---RELRTALLNGFGLGGTNATLVL  332 (332)
T ss_pred             CCC---CCCCEEEEeeecCCCeeEEEeC
Confidence            332   2369999999999999999986

Members are involved in the synthesis of fatty acids and polyketides, a diverse group of natural products. Both pathways are an iterative series of additions of small carbon units, usually acetate, to a nascent acyl group. There are 2 classes of decarboxylating condensing enzymes, which can be distinguished by sequence similarity, type of active site residues and type of primer units (acetyl CoA or acyl carrier protein (ACP) linked units).

>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated

Probab=99.97  E-value=8.6e-29  Score=235.37  Aligned_cols=227  Identities=19%  Similarity=0.171  Sum_probs=185.7

Q ss_pred             HHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCC
Q psy5293          24 PAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQA  100 (359)
Q Consensus        24 ~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~  100 (359)
                      .+..++..+|+  ++|+++|.++| |+++||..|+++|++|++|.+||||+|.++.+..+..+...+.+..         
T Consensus       110 ~~~~~~~~lG~~~~~~~~~i~~~casg~~Al~~A~~~i~~G~~~~~lvgg~d~~~~~~~~~~~~~~~~l~~---------  180 (348)
T PRK06147        110 LLRELEARLGLRLEPGSAVIARGRVSGAVALAQARRLIAAGGCPRVLVAGVDSLLTGPTLAHYEARDRLLT---------  180 (348)
T ss_pred             HHHHHHHHhCCCCCCCcccccccchHHHHHHHHHHHHHHcCCCCEEEEEeeccccCHHHHHHHHHhhccCC---------
Confidence            46678888887  57889999999 9999999999999999999999999999888766666665554431         


Q ss_pred             CCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhh
Q psy5293         101 SRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQ  180 (359)
Q Consensus       101 ~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~  180 (359)
                          +++++|+++|||+++++|++.+++.+++++||+  .+.+                                     
T Consensus       181 ----~~~~~G~v~GEGA~a~vLe~~~~A~~rga~i~a--~g~~-------------------------------------  217 (348)
T PRK06147        181 ----SQNSNGFIPGEAAAAVLLGRPAGGEAPGLPLLG--LGLG-------------------------------------  217 (348)
T ss_pred             ----CCCCCceeeeceEEEEEEccHhhhhcCCCceEE--EEEe-------------------------------------
Confidence                236899999999999999999999999999998  3443                                     


Q ss_pred             hHHHhccCCCCcccccccccCcccccccCCCccCCC-CCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHH
Q psy5293         181 ISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTS-PREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIE  259 (359)
Q Consensus       181 ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~-p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E  259 (359)
                                                ...+..+... +.+.+.++.++++++|++++++|+||||++.|++||..+|..|
T Consensus       218 --------------------------~~~~~~~~~~~~p~~g~gl~~ai~~AL~~agl~~~dId~v~ah~~gt~~~d~~e  271 (348)
T PRK06147        218 --------------------------REPAPVGESEDLPLRGDGLTQAIRAALAEAGCGLEDMDYRIADLNGEQYRFKEA  271 (348)
T ss_pred             --------------------------ecCCCcccCCCCCCChHHHHHHHHHHHHHcCCCHHHCCEEEcCCCCCccchHHH
Confidence                                      2222221111 1135688999999999999999999999999999999999999


Q ss_pred             HHHHHhhcCC--CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccE
Q psy5293         260 LKAIGSLFPA--QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRV  337 (359)
Q Consensus       260 ~~al~~~~~~--~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (359)
                      ..++..+|+.  ...++.+.|+.+||+.+|+|.++++.++++|++|++|+                            ..
T Consensus       272 ~~A~~~~f~~~~~~~~~~~~k~~~Gh~~aAaG~~~~~~a~~~~~~g~~~g----------------------------~~  323 (348)
T PRK06147        272 ALAEMRLFRVRKEFFDLWHPAECIGEIGAAIGPALLGVALAASRKGYGPG----------------------------PN  323 (348)
T ss_pred             HHHHHHHhhhccCCCceecchHhhcchHHHHHHHHHHHHHHHHHcCcCCC----------------------------Cc
Confidence            9999999973  45789999999999999999999999999999888863                            24


Q ss_pred             EEEeCcCcCcceeeEEEee
Q psy5293         338 ALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       338 ~~~~~~g~gG~~~~~il~~  356 (359)
                      +|+.+....|.-+++||++
T Consensus       324 ~L~~s~~d~g~r~a~~l~~  342 (348)
T PRK06147        324 VLCHLSDDDGARAALVLEY  342 (348)
T ss_pred             EEEEecCCCCceEEEEEec
Confidence            5555555566666677664

>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction

Probab=99.93  E-value=3.9e-24  Score=195.02  Aligned_cols=209  Identities=35%  Similarity=0.509  Sum_probs=177.3

Q ss_pred             ChHHHHHHHHHcCC-Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCC
Q psy5293          21 NMVPAGAISIDMDS-KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPA   98 (359)
Q Consensus        21 ~~~~a~~ia~~~g~-~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~   98 (359)
                      +. .+.+++..+|+ ++|+++|+++| |++.||..|+++|++|++|.+||+|+|.                         
T Consensus        44 ~~-~a~~i~~~lg~~~~~~~~i~~~C~s~~~al~~A~~~i~~g~~~~~lv~~~e~-------------------------   97 (254)
T cd00327          44 SG-AAGQLAYHLGISGGPAYSVNQACATGLTALALAVQQVQNGKADIVLAGGSEE-------------------------   97 (254)
T ss_pred             cH-HHHHHHHHhCCCCCCcceeccHhHHHHHHHHHHHHHHHCCCCCEEEEEecce-------------------------
Confidence            44 68999999999 89999999999 9999999999999999999999999995                         


Q ss_pred             CCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcch
Q psy5293          99 QASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSA  178 (359)
Q Consensus        99 ~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a  178 (359)
                                  ++++||+++++|++.+.+.+++++++.++.+...                                  
T Consensus        98 ------------~~~gdGAaa~vL~~~~~a~~~~~~~~~~i~~~~~----------------------------------  131 (254)
T cd00327          98 ------------FVFGDGAAAAVVESEEHALRRGAHPQAEIVSTAA----------------------------------  131 (254)
T ss_pred             ------------eeecceEEEEEECcHHHHHHCCCceEEEEEEEEE----------------------------------
Confidence                        5689999999999999888888899888887651                                  


Q ss_pred             hhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHH
Q psy5293         179 GQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVI  258 (359)
Q Consensus       179 ~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~  258 (359)
                                                   ..+..... +........++++++|++++++++|||+++.|..++...|..
T Consensus       132 -----------------------------~~~~~~~~-~~~~~~~~~~~i~~~l~~ag~~~~did~~~~h~~~~~~~~~~  181 (254)
T cd00327         132 -----------------------------TFDGASMV-PAVSGEGLARAARKALEGAGLTPSDIDYVEAHGTGTPIGDAV  181 (254)
T ss_pred             -----------------------------cCCCCCCC-CCCChHHHHHHHHHHHHHcCCCHHHCCEEEccCCcCccccHH
Confidence                                         11111100 123346788999999999999999999999999999999998


Q ss_pred             HHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEE
Q psy5293         259 ELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVA  338 (359)
Q Consensus       259 E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (359)
                      |.+.....++...+++.+.+..+||+.+||+...+..++++++.+.+||.                       ....+.+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~G~~~~as~~~~l~~~~~~~~~~~~~~~-----------------------~~~~~~~  238 (254)
T cd00327         182 ELALGLDPDGVRSPAVSATLIMTGHPLGAAGLAILDELLLMLEHEFIPPT-----------------------PREPRTV  238 (254)
T ss_pred             HHHHHHHHhCCCCCceeccccccccchHHHHHHHHHHHHHHHhCCCcCCC-----------------------CCCcCEE
Confidence            87776666554457899999999999999999999999999999888871                       1125789


Q ss_pred             EEeCcCcCcceeeEEE
Q psy5293         339 LKNSFGFGGTNACLCI  354 (359)
Q Consensus       339 ~~~~~g~gG~~~~~il  354 (359)
                      +++++|+||+++++||
T Consensus       239 l~~~~g~Gg~~~~~~l  254 (254)
T cd00327         239 LLLGFGLGGTNAAVVL  254 (254)
T ss_pred             EEeeEcCCCcceEEEC
Confidence            9999999999999985

Members are share strong structural similarity, and are involved in the synthesis and degradation of fatty acids, and the production of polyketides, a diverse group of natural products.

>PRK06064 acetyl-CoA acetyltransferase; Provisional

Probab=99.91  E-value=3.7e-23  Score=200.07  Aligned_cols=245  Identities=20%  Similarity=0.236  Sum_probs=174.5

Q ss_pred             HHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH--HH-H--------HH------
Q psy5293          24 PAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS--IA-A--------FC------   84 (359)
Q Consensus        24 ~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~--~~-~--------~~------   84 (359)
                      ++..++..+|++ .|.++|+++| ||+.||..|+++|++|++|++||+|.|++.....  .. .        +.      
T Consensus        63 ~a~~va~~lGl~~~~~~~v~~aCasg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~  142 (389)
T PRK06064         63 IAALIADYAGLAPIPATRVEAACASGGAALRQAYLAVASGEADVVLAAGVEKMTDVPTPDATEAIARAGDYEWEEFFGAT  142 (389)
T ss_pred             HHHHHHHHcCCCCCCeeEEeCCcHHHHHHHHHHHHHHHCCCCCEEEEEEEEecccCcchhhhhhhhcccccccccccCCc
Confidence            477899999998 5999999999 9999999999999999999999999997542110  00 0        00      


Q ss_pred             ---hhccccc----------------------cCCCCCCCCC----------------CCccCCCCCceecceeeEEeec
Q psy5293          85 ---RVRALAT----------------------QFNNEPAQAS----------------RPFDKRRDGFVMGEGSAILVLE  123 (359)
Q Consensus        85 ---~~~~l~~----------------------~~~~~~~~~~----------------~~fd~~~~G~~~geGa~a~~l~  123 (359)
                         ..+....                      +...+|....                .|+. .-+...++||+++++|+
T Consensus       143 ~~~~~al~a~~~~~~yG~s~e~~a~~a~~~~~~A~~np~a~~~~~~t~~~~~~s~~i~~Pl~-~~d~~~~~dGAaa~vL~  221 (389)
T PRK06064        143 FPGLYALIARRYMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLK-LLDCSPITDGAAAVILA  221 (389)
T ss_pred             hHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhhCCCCCHHHHhcCCcccCCCc-hhhcCCCCCcceEEEEe
Confidence               0000000                      0000111100                0111 11333579999999999


Q ss_pred             chHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcc
Q psy5293         124 ELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAH  203 (359)
Q Consensus       124 ~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~  203 (359)
                      +.+.+.+.++++ .+|.|++                                                            
T Consensus       222 s~~~A~~~~~~~-v~I~g~g------------------------------------------------------------  240 (389)
T PRK06064        222 SEEKAKEYTDTP-VWIKASG------------------------------------------------------------  240 (389)
T ss_pred             cHHHHHHhcCCC-eEEEEEE------------------------------------------------------------
Confidence            999998887665 4788876                                                            


Q ss_pred             cccccCCCccCC-CCCc-ChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC-------------
Q psy5293         204 AIGMSGDGHHLT-SPRE-DGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP-------------  268 (359)
Q Consensus       204 aig~~~~~~~~~-~p~~-~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~-------------  268 (359)
                         ...+..... .|+. .......+++++|+++|++++|||++|.|++++. .+..++++++.+..             
T Consensus       241 ---~~~~~~~~~~~~~~~~~~~~~~a~~~al~~aGi~~~did~~e~~d~ft~-~~~~~~e~lgl~~~G~~~~~~~~g~~~  316 (389)
T PRK06064        241 ---QASDTIALHDRKDFTTLDAAVVAAEKAYKMAGIEPKDIDVAEVHDCFTI-AEILAYEDLGFAKKGEGGKLAREGQTY  316 (389)
T ss_pred             ---EecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCCCcH-HHHHHHHHcCCCCCCchHHHHHCCCcc
Confidence               111111111 1111 2246678999999999999999999999999996 56778888876542             


Q ss_pred             -CCCceecccccc--cchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc--cccccCCccEEEEeCc
Q psy5293         269 -AQRLMVSSTKGA--HGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAV--TEWKTDGRRVALKNSF  343 (359)
Q Consensus       269 -~~~~~v~~~k~~--~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  343 (359)
                       ++++||+..++.  .|||.+|+|+.+++++++||+                       +++  .++|+++.+.++++++
T Consensus       317 ~~g~~pvN~~GG~l~~Ghp~~a~G~~~~~e~~~qL~-----------------------g~a~~g~rqv~~a~~~l~~~~  373 (389)
T PRK06064        317 IGGDIPVNPSGGLKAKGHPVGATGVSQAVEIVWQLR-----------------------GEAEKGRQQVIGAGYGLTHNV  373 (389)
T ss_pred             CCCCeeecCCCCcccCCCCcchhHHHHHHHHHHHHh-----------------------CCCCCCCccCCCccEEEEecC
Confidence             345788777776  599999999999999999999                       677  7889989999999998


Q ss_pred             Cc-CcceeeEEEeec
Q psy5293         344 GF-GGTNACLCIAEY  357 (359)
Q Consensus       344 g~-gG~~~~~il~~~  357 (359)
                      |. +..++.+||++.
T Consensus       374 g~~~~~~~~~vl~~~  388 (389)
T PRK06064        374 GGTGHTAVVHILSRK  388 (389)
T ss_pred             CCccceEEEEEEEec
Confidence            74 456677777764

>PRK05656 acetyl-CoA acetyltransferase; Provisional

Probab=99.90  E-value=3e-22  Score=193.47  Aligned_cols=230  Identities=24%  Similarity=0.270  Sum_probs=170.2

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH----------------HHHH-
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS----------------IAAF-   83 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~----------------~~~~-   83 (359)
                      ++..++..+|+.  .|+++|+++| ||+.|+..|+++|++|.+|++||+|+|++.....                +..+ 
T Consensus        65 ~a~~va~~lGl~~~~p~~~V~~~Casg~~ai~~A~~~I~sG~~d~vLv~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~  144 (393)
T PRK05656         65 PARQAAIKAGLPHSVPAMTLNKVCGSGLKALHLAAQAIRCGDAEVIIAGGQENMSLAPYVLPGARTGLRMGHAQLVDSMI  144 (393)
T ss_pred             HHHHHHHHcCCCCCcceEEecccchhHHHHHHHHHHHHHcCCCCEEEEEEEhhhccCccccccccccccccchhhhhhhc
Confidence            477799999996  4999999999 9999999999999999999999999998654210                0000 


Q ss_pred             -----Hh-hcc----ccccC-----------------------CCCCCCCCC----CccC--------------------
Q psy5293          84 -----CR-VRA----LATQF-----------------------NNEPAQASR----PFDK--------------------  106 (359)
Q Consensus        84 -----~~-~~~----l~~~~-----------------------~~~~~~~~~----~fd~--------------------  106 (359)
                           .. .+.    .+..+                       ...|.+..+    |+..                    
T Consensus       145 ~~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Av~sh~~a~~a~~~a~~~~ei~pv~~~~~~~~~~~~~~D~~~r~~~  224 (393)
T PRK05656        145 TDGLWDAFNDYHMGITAENLVEKYGISREAQDAFAAASQQKAVAAIEAGRFDDEITPILIPQRKGEPLAFATDEQPRAGT  224 (393)
T ss_pred             cccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEEeccCCCCceEeccCCCCCCCC
Confidence                 00 000    00000                       000111100    1100                    


Q ss_pred             ------------CCCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293         107 ------------RRDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus       107 ------------~~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                                  ...|.+       ++||+++++|++.+.+.+++.+++++|.|++                        
T Consensus       225 ~~e~l~~l~p~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~A~~~g~~~~a~i~g~~------------------------  280 (393)
T PRK05656        225 TAESLAKLKPAFKKDGSVTAGNASSLNDGAAAVLLMSAAKAKALGLPVLAKIAAYA------------------------  280 (393)
T ss_pred             CHHHHhcCCCCcCCCCCEEccccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEE------------------------
Confidence                        012334       8999999999999999999999999999876                        


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA  247 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~  247 (359)
                                                             ..     ...|.+.+.+..++++++|+++|++|+|||++|.
T Consensus       281 ---------------------------------------~~-----~~~~~~~~~~~~~a~~~al~~agl~~~dId~~e~  316 (393)
T PRK05656        281 ---------------------------------------NA-----GVDPAIMGIGPVSATRRCLDKAGWSLAELDLIEA  316 (393)
T ss_pred             ---------------------------------------Ee-----cCCCcccchhHHHHHHHHHHHcCCCHHHCCEEEe
Confidence                                                   11     1234445567789999999999999999999999


Q ss_pred             ccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCC
Q psy5293         248 HATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT  325 (359)
Q Consensus       248 h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~  325 (359)
                      |++++     .+..+..+.|+  ..++++++.|..+|||+||||++++++++++|+.                       
T Consensus       317 ~d~f~-----~~~~~~~e~lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~l~~~l~~-----------------------  368 (393)
T PRK05656        317 NEAFA-----AQSLAVGKELGWDAAKVNVNGGAIALGHPIGASGCRVLVTLLHEMIR-----------------------  368 (393)
T ss_pred             cCccH-----HHHHHHHHHhCCCCccCCcCCCHHHhCccHHHHHHHHHHHHHHHHHH-----------------------
Confidence            98754     34444444444  3578999999999999999999999999999971                       


Q ss_pred             cccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                             .+.|+++.+...-||...++|||+
T Consensus       369 -------~~~~~gl~~~c~~gG~g~a~~~e~  392 (393)
T PRK05656        369 -------RDAKKGLATLCIGGGQGVALAIER  392 (393)
T ss_pred             -------cCCCEEEEEEcccCcceEEEEEec
Confidence                   136899999999999999999986

>PRK12578 acetyl-CoA acetyltransferase; Provisional

Probab=99.89  E-value=5.2e-22  Score=191.74  Aligned_cols=246  Identities=20%  Similarity=0.199  Sum_probs=166.0

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHH--H---------HH--hhc-
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIA--A---------FC--RVR-   87 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~--~---------~~--~~~-   87 (359)
                      ++..++..+|+++ |.++|+++| |++.||..|+++|++|++|.+||+|+|.+.......  .         +.  ..+ 
T Consensus        60 ~a~~v~~~lGl~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~g~  139 (385)
T PRK12578         60 PAPIVAEYSGLTGKVPLRVEAMCATGLAASLTAYTAVASGLVDMAIAVGVDKMTEVDTSTSLAIGGRGGNYQWEYHFYGT  139 (385)
T ss_pred             hHHHHHHHhCCCCCCeeEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcccchhhhcccccccccccccCCC
Confidence            6778999999986 779999999 999999999999999999999999999865321000  0         00  000 


Q ss_pred             -------cccccC----------------------CCCCCCCC-CCcc--------------CCCCCceecceeeEEeec
Q psy5293          88 -------ALATQF----------------------NNEPAQAS-RPFD--------------KRRDGFVMGEGSAILVLE  123 (359)
Q Consensus        88 -------~l~~~~----------------------~~~~~~~~-~~fd--------------~~~~G~~~geGa~a~~l~  123 (359)
                             .....+                      ..+|.... ++.+              ..-+...++||++++++.
T Consensus       140 ~~~~~~a~~a~~~m~~~g~t~e~~a~va~~~~~~A~~np~a~~~~~i~~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~  219 (385)
T PRK12578        140 TFPTYYALYATRHMAVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISDGSATAIFA  219 (385)
T ss_pred             ChHHHHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCccCCCccHhhcCCcCCCeEEEEEe
Confidence                   000000                      00122111 0000              011233478999999999


Q ss_pred             chHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcc
Q psy5293         124 ELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAH  203 (359)
Q Consensus       124 ~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~  203 (359)
                      +.+.+.+.+.++..+|++++                                                            
T Consensus       220 s~e~A~~l~~~~~~~I~g~g------------------------------------------------------------  239 (385)
T PRK12578        220 SEEKVKELKIDSPVWITGIG------------------------------------------------------------  239 (385)
T ss_pred             cHHHHHhcCCCCCeEEEEEE------------------------------------------------------------
Confidence            99988877755557788776                                                            


Q ss_pred             cccccCCCccC-CCCCcCh-HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC-------------
Q psy5293         204 AIGMSGDGHHL-TSPREDG-RGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP-------------  268 (359)
Q Consensus       204 aig~~~~~~~~-~~p~~~~-~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~-------------  268 (359)
                         +..+.... ..|+... .....+++++|+++|++|+|||++|+|++++. .+...+++|+.+..             
T Consensus       240 ---~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agi~~~DiD~~ei~d~ft~-~~l~~le~lGl~~~G~~~~~~~~G~~~  315 (385)
T PRK12578        240 ---YANDYAYVARRGEWVGFKATQLAARQAYNMAKVTPNDIEVATVHDAFTI-AEIMGYEDLGFTEKGKGGKFIEEGQSE  315 (385)
T ss_pred             ---EecCcccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH-HHHHHHHHcCCCCCCchHHHHHCCCcc
Confidence               11111111 1112122 35678999999999999999999999999994 44555566654331             


Q ss_pred             -CCCceeccccccc--chHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCC-ccEEEEeCcC
Q psy5293         269 -AQRLMVSSTKGAH--GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDG-RRVALKNSFG  344 (359)
Q Consensus       269 -~~~~~v~~~k~~~--Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~g  344 (359)
                       ++++|||...+.+  |||.||+|+.+++++++||+                       +++.++|+++ .+++++++.|
T Consensus       316 ~~G~~pvN~~GG~la~GhP~gatG~~~v~e~~~qLr-----------------------g~ag~~qv~~~~~~~l~~~~G  372 (385)
T PRK12578        316 KGGKVGVNLFGGLKAKGHPLGATGLSMIYEITKQLR-----------------------DEAGKLQQPLKKYIGLVHNVG  372 (385)
T ss_pred             CCCCeeeCCCCCcccCCCCccHHHHHHHHHHHHHHh-----------------------CCcccCcCCcchheEEEeccC
Confidence             3345665555544  99999999999999999999                       6777778775 5799999997


Q ss_pred             -cCcceeeEEEee
Q psy5293         345 -FGGTNACLCIAE  356 (359)
Q Consensus       345 -~gG~~~~~il~~  356 (359)
                       .+..+.++|+++
T Consensus       373 g~~~~~~~~v~~~  385 (385)
T PRK12578        373 GTGHFAYVMILRR  385 (385)
T ss_pred             cchhhEEEEEEeC
Confidence             454555666653

>PRK13359 beta-ketoadipyl CoA thiolase; Provisional

Probab=99.88  E-value=8.7e-22  Score=189.87  Aligned_cols=229  Identities=21%  Similarity=0.253  Sum_probs=165.0

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHH-----HH-------Hh-h-
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIA-----AF-------CR-V-   86 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~-----~~-------~~-~-   86 (359)
                      ++.+++...|+.  -|.++|+++| ||++|+..|+++|++|++|++||+|+|+|+......     .+       .. . 
T Consensus        67 ~ar~~~l~~Gl~~~vp~~tV~~~CaSG~~Av~~A~~~I~sG~~divlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~  146 (400)
T PRK13359         67 VARMSLLLAGLPHGVPGSTINRLCGSGMDAVGVAARAIKSGEAALMIAGGVESMSRAPFVMGKAESAFSRQAEIFDTTIG  146 (400)
T ss_pred             HHHHHHHHcCCCCCCceEEEeccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCccccccccccccCCccccccccc
Confidence            588899999996  4999999999 999999999999999999999999999987532100     00       00 0 


Q ss_pred             -----ccccccCCC-----------------------------------CCCC-------------------------C-
Q psy5293          87 -----RALATQFNN-----------------------------------EPAQ-------------------------A-  100 (359)
Q Consensus        87 -----~~l~~~~~~-----------------------------------~~~~-------------------------~-  100 (359)
                           ..+...+..                                   .|.+                         . 
T Consensus       147 ~~~~~~~~~~~~~~~~mg~~ae~~a~~~gisre~~d~~a~~Sh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~De~~  226 (400)
T PRK13359        147 WRFVNPLMKQLYGVDSMPETAENVATDYNVSRADQDAFALRSQQKAARAQADGTLAQEIVPVTIPQKKGDPLVVSRDEHP  226 (400)
T ss_pred             ccccCCccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCCccceeeeeeccCCCCceeecCCCCC
Confidence                 000000000                                   0100                         0 


Q ss_pred             --C---------CCccCC-----CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhccccccc
Q psy5293         101 --S---------RPFDKR-----RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKL  164 (359)
Q Consensus       101 --~---------~~fd~~-----~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~  164 (359)
                        .         ..|++.     .+-..+.||+++++|++.+.+.+++.+++++|++++                     
T Consensus       227 r~~t~e~l~~l~p~f~~~g~lT~~n~~~~~DGAaa~vL~s~e~A~~~g~~~~a~I~g~~---------------------  285 (400)
T PRK13359        227 RETTLEALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRARVLGIA---------------------  285 (400)
T ss_pred             CCCCHHHHhcCCCccCCCCceecccccCccCceEEEEEecHHHHHHCCCCccEEEEEEE---------------------
Confidence              0         112221     011227899999999999999999999999999876                     


Q ss_pred             CcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccE
Q psy5293         165 SPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISY  244 (359)
Q Consensus       165 ~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~  244 (359)
                                                                ...     ..|.+.+.+..++++++|+++|++|+|||+
T Consensus       286 ------------------------------------------~~~-----~~p~~~~~~~~~A~~~al~~AGl~~~DID~  318 (400)
T PRK13359        286 ------------------------------------------TAG-----VEPRVMGIGPAPATQKLLARLGMTLDQFDV  318 (400)
T ss_pred             ------------------------------------------Eec-----CCCCccchhHHHHHHHHHHHhCCCHHHcCc
Confidence                                                      110     234445567789999999999999999999


Q ss_pred             EEeccCCCCcccHHHHHHHH--hhcC--CCCceecccccc--cchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccC
Q psy5293         245 INAHATSTPLGDVIELKAIG--SLFP--AQRLMVSSTKGA--HGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEA  318 (359)
Q Consensus       245 ie~h~~~t~~~d~~E~~al~--~~~~--~~~~~v~~~k~~--~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~  318 (359)
                      +|.|+.++       .+.+.  +.++  ...+||+..++.  +|||.||+|+.+++++++||+                 
T Consensus       319 iei~dafa-------~~~l~~~e~lg~~~~~~pvN~~GG~la~GHp~gasG~~~v~e~~~qL~-----------------  374 (400)
T PRK13359        319 IELNEAFA-------SQGLAVLRELGLADDDARVNPNGGAIALGHPLGASGARLVTTALYQLE-----------------  374 (400)
T ss_pred             CccCcHhH-------HHHHHHHHHcCCCCCCCCEECCCchhhcCCchhHHHHHHHHHHHHHHh-----------------
Confidence            99665544       33322  2233  245788888885  799999999999999999998                 


Q ss_pred             CCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         319 GGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                            ++       +.++++++...-||...++|||+.
T Consensus       375 ------~~-------~~~~g~~~~c~~gG~g~a~~ie~~  400 (400)
T PRK13359        375 ------RT-------GGRFALCTMCIGVGQGIAIAIERV  400 (400)
T ss_pred             ------hc-------CCCeEEEEEcccCCceeEEEEEeC
Confidence                  21       257899999989999999999973

>PRK07516 acetyl-CoA acetyltransferase; Provisional

Probab=99.88  E-value=3.8e-21  Score=185.94  Aligned_cols=239  Identities=22%  Similarity=0.259  Sum_probs=162.2

Q ss_pred             HHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHH--------------------hh
Q psy5293          29 SIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFC--------------------RV   86 (359)
Q Consensus        29 a~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~--------------------~~   86 (359)
                      ...++++. |.++|+++| ||+.||..|+++|++|++|++||+|+|++..........                    .+
T Consensus        68 ~~~~gl~~~p~~~v~~~CaSg~~Al~~A~~~I~sG~~d~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (389)
T PRK07516         68 QADPALRFKPATRVENACATGSAAVYAALDAIEAGRARIVLVVGAEKMTATPTAEVGDILLGASYLKEEGDTPGGFAGVF  147 (389)
T ss_pred             HHhcCCCCCceeeeccccHHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCcchhhHHHhhhccccccccccCCCcHHHH
Confidence            34567765 999999999 999999999999999999999999999865421100000                    00


Q ss_pred             ccccccC----------------------CCCCCCCC-CCccC------------------CCCCceecceeeEEeecch
Q psy5293          87 RALATQF----------------------NNEPAQAS-RPFDK------------------RRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        87 ~~l~~~~----------------------~~~~~~~~-~~fd~------------------~~~G~~~geGa~a~~l~~~  125 (359)
                      +..+..+                      ..+|.... ++++.                  .-+...++||+++++|.+.
T Consensus       148 a~~a~~y~~~yg~~~e~~a~vav~~~~~A~~nP~A~~~~~~t~~~~~~~~~~~~~i~~pl~~~d~~~~~DGAaa~il~s~  227 (389)
T PRK07516        148 GRIAQAYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLVAGPLRRTDCSLVSDGAAALVLADA  227 (389)
T ss_pred             HHHHHHHHHHHCCCHHHHHHHHHHHHHhhhcCChhhcCCcccHHhhhhhhhcCCcccCCCchhhcCCcCcceEEEEEecH
Confidence            0000000                      00222110 11111                  0122347899999999999


Q ss_pred             HHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccc
Q psy5293         126 DHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAI  205 (359)
Q Consensus       126 ~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~ai  205 (359)
                      +.+.+.+.  ..+|.+++.                                                             
T Consensus       228 ~~a~~~~~--~v~i~g~~~-------------------------------------------------------------  244 (389)
T PRK07516        228 ETARALQR--AVRFRARAH-------------------------------------------------------------  244 (389)
T ss_pred             HHHHhcCC--CEEEEEEEe-------------------------------------------------------------
Confidence            88876643  356777651                                                             


Q ss_pred             cccCCCcc--CCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--------------C
Q psy5293         206 GMSGDGHH--LTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--------------A  269 (359)
Q Consensus       206 g~~~~~~~--~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--------------~  269 (359)
                        ..+...  ...+. ...+...+++++|+++|++|+|||++|+|++++. .+..++++|+.+..              +
T Consensus       245 --~~~~~~~~~~~~~-~~~~~~~a~~~a~~~agl~~~did~~e~~d~f~~-~~~~~~e~lg~~~~G~~~~~~~~g~~~~~  320 (389)
T PRK07516        245 --VNDFLPLSRRDPL-AFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTI-AELIEYEAMGLAPPGQGARAIREGWTAKD  320 (389)
T ss_pred             --ccCcccccCCCcc-ccHHHHHHHHHHHHHcCCCHHHCCEEEEecCCCH-HHHHHHHHcCCCCCCchHHHHHCCCccCC
Confidence              111111  01111 2256678999999999999999999999999996 45677777765432              3


Q ss_pred             CCceeccccc--ccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcC-cC
Q psy5293         270 QRLMVSSTKG--AHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFG-FG  346 (359)
Q Consensus       270 ~~~~v~~~k~--~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~g  346 (359)
                      +.+||+...+  .+|||.||||+.+++++++||+                       +++.++|+++.|++++++.| .+
T Consensus       321 g~~pvN~sGG~la~Ghp~gasG~~~~~e~~~QL~-----------------------g~ag~rQv~~a~~~l~~~~gg~~  377 (389)
T PRK07516        321 GKLPVNPSGGLKAKGHPIGATGVSMHVLAAMQLT-----------------------GEAGGMQIPGAKLAGVFNMGGAA  377 (389)
T ss_pred             CCeeecCCCCcccCCCCccHHHHHHHHHHHHHhc-----------------------CCccCCcCCchheeeeeccCccc
Confidence            4566654333  4599999999999999999999                       77888899889999999997 44


Q ss_pred             cceeeEEEeec
Q psy5293         347 GTNACLCIAEY  357 (359)
Q Consensus       347 G~~~~~il~~~  357 (359)
                      .++..+|+++.
T Consensus       378 ~~~~~~vl~~~  388 (389)
T PRK07516        378 VANYVSILERV  388 (389)
T ss_pred             ceEEEEEEEec
Confidence            45666666764

>KOG1406|consensus

Probab=99.87  E-value=3.5e-23  Score=180.43  Aligned_cols=288  Identities=18%  Similarity=0.195  Sum_probs=174.9

Q ss_pred             HHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCCC
Q psy5293          25 AGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASR  102 (359)
Q Consensus        25 a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  102 (359)
                      ..+.-+.+|++| |.+.|++.| +|..||.+|.+.|++|..|+||+.|+|+|..-.          |+..    ...+..
T Consensus        66 gqraiyevgmtgipi~nvnnncatgssalflakqiiesgn~dcvlalgfekm~~gs----------l~~k----~~dra~  131 (408)
T KOG1406|consen   66 GQRAIYEVGMTGIPIYNVNNNCATGSSALFLAKQIIESGNSDCVLALGFEKMERGS----------LSNK----AADRAL  131 (408)
T ss_pred             chHHHHhccccCcceeeccCccccCchHHHHHHHHHhcCCcceEEeechhhhCCcc----------cchh----hhhccC
Confidence            345666899999 999999999 999999999999999999999999999865332          1110    001111


Q ss_pred             CccCCC------CCceec-------ceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccc---cCc
Q psy5293         103 PFDKRR------DGFVMG-------EGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNK---LSP  166 (359)
Q Consensus       103 ~fd~~~------~G~~~g-------eGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~---~~p  166 (359)
                      |.|.+-      .|+-.+       .-++-.-+|.+..-.+...+|-.+-...+.+++-.-.+.--..++.+..   ++-
T Consensus       132 p~dkhi~~m~e~ygl~a~pmaaqmfgnagkehmekygtk~ehfakiawknhkhsvnnpysqf~deysldqvm~s~~v~df  211 (408)
T KOG1406|consen  132 PVDKHISVMSETYGLEAAPMAAQMFGNAGKEHMEKYGTKPEHFAKIAWKNHKHSVNNPYSQFRDEYSLDQVMKSPQVVDF  211 (408)
T ss_pred             cchhhHHHHHhhccCCCCcchHHHhhhhHHHHHHHhCCCHHHHhHhhhhccccccCChhHhhhhhccHHHHhcchHHHHH
Confidence            222111      111100       0112222232222222233333332333333331111111111333332   332


Q ss_pred             chhhcccCCcchh--------hhHHHhccC-CCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCC
Q psy5293         167 YFVTRILPNMSAG--------QISIEHGFQ-GPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANL  237 (359)
Q Consensus       167 ~~~~~~~~~~~a~--------~ia~~~g~~-gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl  237 (359)
                      ....+|-|.+...        .+.+++|++ ..+-.++...++.-...+...+-..++..    .....+.++.+++.++
T Consensus       212 lt~lqccptsdgaaaailaseafv~k~gl~~qaveivg~em~td~ps~faeks~ikm~gf----dm~~~aa~~l~aksgl  287 (408)
T KOG1406|consen  212 LTKLQCCPTSDGAAAAILASEAFVRKHGLEKQAVEIVGMEMATDPPSTFAEKSLIKMAGF----DMTRLAAKRLFAKSGL  287 (408)
T ss_pred             HHHhhcCCCCCchHHHHHhHHHHHHhcccHHHHHHHHHHHhccCCchhhhhhhhhhhhcc----hHHHHHHHHHHHHcCC
Confidence            2233444432221        345566664 33334444455543333221111222221    4556788999999999


Q ss_pred             CCCCccEEEeccCCCCcccHHHHHHHHhhcC--------------CCCceeccccccc--chHHHhHHHHHHHHHHHHHh
Q psy5293         238 SPGDISYINAHATSTPLGDVIELKAIGSLFP--------------AQRLMVSSTKGAH--GHLLGAAGNLESAFTILAVH  301 (359)
Q Consensus       238 ~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--------------~~~~~v~~~k~~~--Gh~~~AsG~~~~~~~~~~l~  301 (359)
                      +|.||++||+|+++.. ++.+.+++|+.+..              .++..|+...+.|  |||+||+|+++.+++++|||
T Consensus       288 tpndvqvielhdcfs~-nelityealglcpegqg~~~vdrgdntyggkwvinpsggliskghplgatglaqcaelcwqlr  366 (408)
T KOG1406|consen  288 TPNDVQVIELHDCFSA-NELITYEALGLCPEGQGGEFVDRGDNTYGGKWVINPSGGLISKGHPLGATGLAQCAELCWQLR  366 (408)
T ss_pred             CcccceEEEeecccch-hhhhhHHHhcCCCCCCCceeeecCCCccCceEEECCCCccccCCCcCccchHHHHHHHHHHHh
Confidence            9999999999999996 78899999987753              3344454444444  99999999999999999999


Q ss_pred             cCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEE
Q psy5293         302 EGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCI  354 (359)
Q Consensus       302 ~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il  354 (359)
                                             +....+|+++.+.++.++.|.||.....+.
T Consensus       367 -----------------------g~agkrqvpnakvalqhnlgiggavvv~ly  396 (408)
T KOG1406|consen  367 -----------------------GLAGKRQVPNAKVALQHNLGIGGAVVVALY  396 (408)
T ss_pred             -----------------------hhhccccCCCchhhhhhccCcCceeEEEEe
Confidence                                   788889999999999999999987665554

>PRK06633 acetyl-CoA acetyltransferase; Provisional

Probab=99.87  E-value=1.5e-21  Score=187.54  Aligned_cols=231  Identities=21%  Similarity=0.276  Sum_probs=164.0

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCC-HHH-H-HH---------HH---h
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCIS-QLS-I-AA---------FC---R   85 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~~-~-~~---------~~---~   85 (359)
                      ++.+++...|+.  -|.++|+++| ||+.|+..|+++|++|++|++||+|+|+|.. +.. . ..         ..   .
T Consensus        66 ~~r~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~A~~~I~sG~~dvvla~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~  145 (392)
T PRK06633         66 PARQTLIHAGIPKEVPGYTINKVCGSGLKSVALAANSIMTGDNEIVIAGGQENMSLGMHGSYIRAGAKFGDIKMVDLMQY  145 (392)
T ss_pred             HHHHHHHHCCCCCCccchhhcchhHHHHHHHHHHHHHHHcCCCCEEEEcccccCCCCCcchhcccccccCcchhhhhhcc
Confidence            567788899996  4999999999 9999999999999999999999999998763 210 0 00         00   0


Q ss_pred             hcc---c--------cccC----C------------------CCCCCC--------------------------------
Q psy5293          86 VRA---L--------ATQF----N------------------NEPAQA--------------------------------  100 (359)
Q Consensus        86 ~~~---l--------~~~~----~------------------~~~~~~--------------------------------  100 (359)
                      .+.   +        +..+    .                  .+|...                                
T Consensus       146 ~~~~~~~~~~~~a~~a~~~~~~~gitre~~d~~Avksh~~a~~np~A~~~~~ei~p~~v~~~~~~~~~~~d~~~rp~~~~  225 (392)
T PRK06633        146 DGLTDVFSGVFMGITAENISKQFNISRQEQDEFALSSHKKAAKAQLAGIFKDEILPIEVTIKKTTSLFDHDETVRPDTSL  225 (392)
T ss_pred             cccccccCcchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCcCceeeEEeccCCCceeeccCCCCCCCCCH
Confidence            000   0        0000    0                  001000                                


Q ss_pred             ------CCCccCCCCC-------ceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293         101 ------SRPFDKRRDG-------FVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus       101 ------~~~fd~~~~G-------~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                            ...|++  .|       ..++||+++++|++.+.+.+++.+++++|++++                        
T Consensus       226 e~l~~l~p~~~~--~g~lt~~n~s~~sDGAaalvl~see~A~~~g~~p~a~I~g~~------------------------  279 (392)
T PRK06633        226 EILSKLRPAFDK--NGVVTAGNASSINDGAACLMVVSEEALKKHNLTPLARIVSYA------------------------  279 (392)
T ss_pred             HHHccCCCccCC--CCCEechhcCCccCceEEEEEecHHHHHHCCCCeeEEEEEEE------------------------
Confidence                  001111  12       347899999999999999999999999999886                        


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA  247 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~  247 (359)
                                                             ...     ..|...+.+..++++++|+++|++|+|||++|.
T Consensus       280 ---------------------------------------~~~-----~~~~~~~~~~~~a~~~Al~~AGl~p~DID~~ei  315 (392)
T PRK06633        280 ---------------------------------------SAG-----VDPSIMGTAPVPASQKALSKAGWSVNDLEVIEV  315 (392)
T ss_pred             ---------------------------------------Eec-----CCcchhchHHHHHHHHHHHHcCCCHHHcCeeeh
Confidence                                                   211     122233356688999999999999999999997


Q ss_pred             ccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc
Q psy5293         248 HATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAV  327 (359)
Q Consensus       248 h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~  327 (359)
                      |+.++. .+....+.+.  ....++++++.|..+|||+||||+++++++++||+                       ++ 
T Consensus       316 ~dafa~-~~l~~~~~l~--~~~~~vN~sGg~~a~GHplgAtG~~~~~~~~~qL~-----------------------~~-  368 (392)
T PRK06633        316 NEAFAA-QSIYVNREMK--WDMEKVNINGGAIAIGHPIGASGGRVLITLIHGLR-----------------------RA-  368 (392)
T ss_pred             hhHHHH-HHHHHHhhhC--CCccccCCCCchHhhCCcHHHHHHHHHHHHHHHHH-----------------------hc-
Confidence            755542 1111111111  11346888999999999999999999999999998                       21 


Q ss_pred             cccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         328 TEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                            +.|+++++...-||...++|||+.
T Consensus       369 ------~~~~g~~~~c~~gG~g~a~~~e~~  392 (392)
T PRK06633        369 ------KAKKGLVTLCIGGGMGMAMCVEAV  392 (392)
T ss_pred             ------CCCeEEEEEecccChhheEEEEeC
Confidence                  257899999989999999999974

>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.87  E-value=3.3e-21  Score=185.67  Aligned_cols=235  Identities=22%  Similarity=0.241  Sum_probs=167.4

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH-------------------HH
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS-------------------IA   81 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~-------------------~~   81 (359)
                      ++.+++...|+.  -|+++|+++| ||+.|+..|+++|++|++|++||+|+|+|.....                   .+
T Consensus        68 ~ar~~~~~~Gl~~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~d~vlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~  147 (387)
T PRK08947         68 IARNAALLAGIPHSVPAVTVNRLCGSSMQALHDAARAIMTGDGDVFLIGGVEHMGHVPMNHGVDFHPGLSKNVAKAAGMM  147 (387)
T ss_pred             HHHHHHHHcCCCCCCcceeeechhHHHHHHHHHHHHHHHCCCCCEEEEccccccccCccccccCcchhhhhhccccchHH
Confidence            466688889986  3889999999 9999999999999999999999999999764210                   00


Q ss_pred             HH----------------------Hhhcccccc----CCC-----------------CCCCCC------------C-Ccc
Q psy5293          82 AF----------------------CRVRALATQ----FNN-----------------EPAQAS------------R-PFD  105 (359)
Q Consensus        82 ~~----------------------~~~~~l~~~----~~~-----------------~~~~~~------------~-~fd  105 (359)
                      ..                      +...+..++    +.+                 +|+...            + .|+
T Consensus       148 ~~~a~~~~~~ygisre~~~~~avksh~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~  227 (387)
T PRK08947        148 GLTAEMLGKMHGISREQQDAFAARSHQRAWAATQEGRFKNEIIPTEGHDADGVLKLFDYDEVIRPETTVEALAALRPAFD  227 (387)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeeeecCCCCCceeecCCCCCcCCCCHHHHhcCCceee
Confidence            00                      000000000    000                 112111            1 122


Q ss_pred             C------CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchh
Q psy5293         106 K------RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAG  179 (359)
Q Consensus       106 ~------~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~  179 (359)
                      +      ..+...++||++++++.+.+.+.+.+++++++|.+++                                    
T Consensus       228 p~~g~lt~~~~~~~sDGAaAvvl~s~~~A~~~g~~p~~~I~g~~------------------------------------  271 (387)
T PRK08947        228 PVNGTVTAGTSSALSDGASAMLVMSESRAKELGLKPRARIRSMA------------------------------------  271 (387)
T ss_pred             CCCCcEEccccCCcCCceEEEEEccHHHHHHCCCCccEEEEEEE------------------------------------
Confidence            2      1223347899999999999999888888888998876                                    


Q ss_pred             hhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHH
Q psy5293         180 QISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIE  259 (359)
Q Consensus       180 ~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E  259 (359)
                                                 ....     .+.....+...+++++|+++|++|+|||++|+|+.++. .+...
T Consensus       272 ---------------------------~~~~-----~~~~~~~~~~~a~~~al~~Agl~~~DId~~El~d~F~~-~~l~~  318 (387)
T PRK08947        272 ---------------------------VAGC-----DPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAA-QSLPC  318 (387)
T ss_pred             ---------------------------EcCc-----CcccccccHHHHHHHHHHHcCCCHHHCCEEEecccchH-HHHHH
Confidence                                       1100     01111134577899999999999999999999999984 44555


Q ss_pred             HHHHHhhcC-CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEE
Q psy5293         260 LKAIGSLFP-AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVA  338 (359)
Q Consensus       260 ~~al~~~~~-~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (359)
                      +++|+.+.. ..++++++....+|||.||||+.++++++++|+                       +       ++.|++
T Consensus       319 ~e~lg~~~~~~~~vN~~GG~la~GhP~GAtG~~~v~~l~~~L~-----------------------~-------~~~~~g  368 (387)
T PRK08947        319 LKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLME-----------------------R-------KDAQFG  368 (387)
T ss_pred             HHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHH-----------------------h-------cCCCEE
Confidence            666654322 246777777777799999999999999999998                       2       236899


Q ss_pred             EEeCcCcCcceeeEEEeec
Q psy5293         339 LKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       339 ~~~~~g~gG~~~~~il~~~  357 (359)
                      +.++.+-+|....+||+++
T Consensus       369 l~~~~~g~G~g~a~~~e~~  387 (387)
T PRK08947        369 LATMCIGLGQGIATVFERV  387 (387)
T ss_pred             EEEEeecccceeEEEEEeC
Confidence            9999988888888999874

>PRK07661 acetyl-CoA acetyltransferase; Provisional

Probab=99.87  E-value=2.8e-21  Score=186.24  Aligned_cols=233  Identities=22%  Similarity=0.288  Sum_probs=164.5

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH-----------------H---
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS-----------------I---   80 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~-----------------~---   80 (359)
                      ++.+++..+|+.  .|.++|+++| ||+.|+..|+++|++|.+|++||+|+|+|.....                 +   
T Consensus        67 ~a~~~~~~lGl~~~~p~~~V~~aCaSG~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~  146 (391)
T PRK07661         67 MARNIGALAGLPYTVPAITINRYCSSGLQSIAYGAERIMLGHSEAVIAGGAESMSLVPMMGHVVRPNPRLVEAAPEYYMG  146 (391)
T ss_pred             HHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEEEEeecccCCccccccCCCccccccccchhhh
Confidence            466688999997  4999999999 9999999999999999999999999998754210                 0   


Q ss_pred             HHHH------h----------------hcccccc----CCCC--C----C------C-------------CC--------
Q psy5293          81 AAFC------R----------------VRALATQ----FNNE--P----A------Q-------------AS--------  101 (359)
Q Consensus        81 ~~~~------~----------------~~~l~~~----~~~~--~----~------~-------------~~--------  101 (359)
                      ....      .                ..+..++    +..+  |    +      +             ..        
T Consensus       147 m~~~a~~~~~~~g~tre~~a~~av~s~~~a~~n~~ag~~~~ei~pi~~~~~~~~~~~~~~~~~~~~~~d~~~rp~~~~e~  226 (391)
T PRK07661        147 MGHTAEQVAVKYGISREDQDAFAVRSHQRAAKALAEGKFADEIVPVDVTLRTVGENNKLQEETITFSQDEGVRADTTLEI  226 (391)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeecccccccccCcccccceeEecCCCCCCCCCHHH
Confidence            0000      0                0000000    0000  0    0      0             00        


Q ss_pred             ----CC-cc-----CCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhc
Q psy5293         102 ----RP-FD-----KRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTR  171 (359)
Q Consensus       102 ----~~-fd-----~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  171 (359)
                          +| |.     ...+...++||+++++|++.+.+.+.+.+++++|++++                            
T Consensus       227 l~~l~p~f~~~g~lt~~~~~~~~DGAaavvl~s~~~A~~~g~~~~~~i~g~~----------------------------  278 (391)
T PRK07661        227 LGKLRPAFNVKGSVTAGNSSQMSDGAAAVLLMDREKAESDGLKPLAKFRSFA----------------------------  278 (391)
T ss_pred             HhcCCCCcCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEE----------------------------
Confidence                11 10     01122337899999999999999999999989999886                            


Q ss_pred             ccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCC
Q psy5293         172 ILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATS  251 (359)
Q Consensus       172 ~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~  251 (359)
                                                         ...     ..|...+.+...+++++|+++|++++|||++|.|+.+
T Consensus       279 -----------------------------------~~~-----~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~f  318 (391)
T PRK07661        279 -----------------------------------VAG-----VPPEVMGIGPIAAIPKALKLAGLELSDIGLFELNEAF  318 (391)
T ss_pred             -----------------------------------Eec-----CCCcccchHHHHHHHHHHHHcCCCHHHCCEEEeCCHH
Confidence                                               211     1222333577899999999999999999999966555


Q ss_pred             CCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccc
Q psy5293         252 TPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWK  331 (359)
Q Consensus       252 t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~  331 (359)
                      +. .+...++.|+.+  ..++++++.+..+|||.||||+++++++++||++                             
T Consensus       319 ~~-~~l~~~e~lg~~--~~~vN~~GG~~a~Ghp~gasG~~~~~el~~qL~~-----------------------------  366 (391)
T PRK07661        319 AS-QSIQVIRELGLD--EEKVNVNGGAIALGHPLGCTGAKLTLSLIHEMKR-----------------------------  366 (391)
T ss_pred             HH-HHHHHHHHcCCC--CCCCCCCCChHHhCCcHHHHHHHHHHHHHHHHHh-----------------------------
Confidence            42 112222222221  3578888999989999999999999999999981                             


Q ss_pred             cCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         332 TDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       332 ~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                       .+.++++.+...-||...++|||+.
T Consensus       367 -~~~~~g~~~~c~~gg~g~a~~~e~~  391 (391)
T PRK07661        367 -RNEQFGIVTMCIGGGMGAAGVFELL  391 (391)
T ss_pred             -cCCCeEEEEEccccChhhEEEEEeC
Confidence             1257999999999999999999973

>PRK08242 acetyl-CoA acetyltransferase; Validated

Probab=99.87  E-value=2.9e-21  Score=186.07  Aligned_cols=233  Identities=21%  Similarity=0.226  Sum_probs=167.1

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH-----------HH----HHh
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI-----------AA----FCR   85 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~-----------~~----~~~   85 (359)
                      ++..++...|+.  -|+++|+++| ||++||..|+++|++|.+|++|++|+|+|+.....           ..    +..
T Consensus        68 ~~r~a~~~~Gl~~~~pa~~Vn~aCaSg~~Ai~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~  147 (402)
T PRK08242         68 IARTAVLAAGLPETVPGVQINRFCASGLEAVNLAAAKVRSGWDDLVIAGGVESMSRVPMGSDGGAWAMDPSTNFPTYFVP  147 (402)
T ss_pred             HHHHHHHHcCCCCCCCeEEEcchhhhHHHHHHHHHHHHHcCCCCEEEEEEEEccCCCcccccCcccccCcccccccccCC
Confidence            466777888983  5999999999 99999999999999999999999999997642210           00    000


Q ss_pred             hccccc-----------------------c--------CC--------------CCCCCCC------------C-CccCC
Q psy5293          86 VRALAT-----------------------Q--------FN--------------NEPAQAS------------R-PFDKR  107 (359)
Q Consensus        86 ~~~l~~-----------------------~--------~~--------------~~~~~~~------------~-~fd~~  107 (359)
                      ++..+.                       .        +.              .++++..            + .|++.
T Consensus       148 mg~~Ae~~a~~~gisRe~~d~~A~~Sh~~A~~A~~~g~f~~ei~pv~~~~~~~~~~~de~~r~~~t~e~l~~l~p~f~~~  227 (402)
T PRK08242        148 QGISADLIATKYGFSREDVDAYAVESQQRAAAAWAEGYFAKSVVPVKDQNGLTILDHDEHMRPGTTMESLAKLKPSFAMM  227 (402)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeecCCCCEeeCCCCCCCCCCCHHHHhCCCCCccCc
Confidence            000000                       0        00              0122211            2 24331


Q ss_pred             C--------------------------CCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccc
Q psy5293         108 R--------------------------DGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSY  161 (359)
Q Consensus       108 ~--------------------------~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~  161 (359)
                      .                          +-..+.||+++++|++.+.+.+++.+++++|++++                  
T Consensus       228 ~~~~g~~~~~~~~~~~~~~~~~~vTagn~s~~~DGAaAlvl~s~e~A~~~g~~p~a~I~g~~------------------  289 (402)
T PRK08242        228 GEMGGFDAVALQKYPEVERINHVHHAGNSSGIVDGAAAVLIGSEEAGKALGLKPRARIVATA------------------  289 (402)
T ss_pred             cccCcccccccccccccccccCceecCcCCCCCCceEEEEEecHHHHHHcCCCCcEEEEEEE------------------
Confidence            1                          22247899999999999999999988889999876                  


Q ss_pred             cccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCC
Q psy5293         162 NKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGD  241 (359)
Q Consensus       162 ~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~d  241 (359)
                                                                   ...+     .|.....++..+++++|+++|++++|
T Consensus       290 ---------------------------------------------~~~~-----~~~~~~~~~~~a~~~al~~AGl~~~D  319 (402)
T PRK08242        290 ---------------------------------------------TIGS-----DPTIMLTGPVPATRKALAKAGLTVDD  319 (402)
T ss_pred             ---------------------------------------------EecC-----CchhhcccHHHHHHHHHHHcCCCHHH
Confidence                                                         1111     12122245578999999999999999


Q ss_pred             ccEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCC
Q psy5293         242 ISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY  321 (359)
Q Consensus       242 I~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~  321 (359)
                      ||++|.|+.++. ......+.|+.  ...++++++.+..+|||+||||++++++++++|++                   
T Consensus       320 ID~~ei~daFa~-~~l~~~e~lG~--~~~~vN~~GG~la~GHP~GAsG~~~~~~l~~~L~~-------------------  377 (402)
T PRK08242        320 IDLFELNEAFAS-VVLRFMQALDI--PHDKVNVNGGAIAMGHPLGATGAMILGTVLDELER-------------------  377 (402)
T ss_pred             CCEEEecchhhH-HHHHHHHHhCC--CCcCCCcCCCHHhcCCcHHHHHHHHHHHHHHHHHh-------------------
Confidence            999998877663 22233333332  24578999999999999999999999999999981                   


Q ss_pred             CCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                                 .+.|+++++...-||+..++|||+.
T Consensus       378 -----------~~~~~g~~~~c~ggG~g~a~~~e~~  402 (402)
T PRK08242        378 -----------RGKRTALITLCVGGGMGIATIIERV  402 (402)
T ss_pred             -----------cCCCeEEEEEcccCCceeEEEEEeC
Confidence                       1258899999988999999999973

>TIGR02445 fadA fatty oxidation complex, beta subunit FadA

Probab=99.87  E-value=5.1e-21  Score=184.09  Aligned_cols=235  Identities=23%  Similarity=0.254  Sum_probs=166.2

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH---------H----------H
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS---------I----------A   81 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~---------~----------~   81 (359)
                      ++.+++...|+.  -|+++|+++| ||+.|+..|+++|++|++|++||+|+|+|.....         +          +
T Consensus        66 ~ar~~~~~~g~~~~~p~~tV~~~CaSG~~Ai~~Aa~~I~sG~~d~vlagG~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~  145 (385)
T TIGR02445        66 IARNAALLAQIPHTSAAVTVNRLCGSSMQALHDAARAIMTGDADVCLVGGVEHMGHVPMMHGVDFHPGMSLHVAKAAGMM  145 (385)
T ss_pred             HHHHHHHHCCCCCCcchhhhhhhhHHHHHHHHHHHHHHHCCCCCEEEEeeehhcccCccccCCCcchhHHhhhccccchH
Confidence            466666677765  4889999999 9999999999999999999999999998754311         0          0


Q ss_pred             HH----------------------Hhhcccc----ccCCC-----------------CCCCCCC------------C-cc
Q psy5293          82 AF----------------------CRVRALA----TQFNN-----------------EPAQASR------------P-FD  105 (359)
Q Consensus        82 ~~----------------------~~~~~l~----~~~~~-----------------~~~~~~~------------~-fd  105 (359)
                      .+                      +......    ..+.+                 +|+...|            | |+
T Consensus       146 ~~~a~~~~~~ygitre~~d~~A~~sh~~a~~a~~~g~f~nei~pv~~~~~~~~~~~~~~da~~r~~~t~e~~~~~~~v~~  225 (385)
T TIGR02445       146 GLTAEMLGKMHGISREQQDAFAARSHARAHAATQEGKFKNEIIPTQGHDADGFLKQFDYDEVIRPETTVESLAALRPAFD  225 (385)
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeeeeccCCCCceeeCCCCCCCCCCCHHHHhcCCceec
Confidence            00                      0000000    00000                 1332221            1 22


Q ss_pred             CC------CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchh
Q psy5293         106 KR------RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAG  179 (359)
Q Consensus       106 ~~------~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~  179 (359)
                      +.      .+...++||+++++|.+.+.+.+.+++++++|++++                                    
T Consensus       226 p~~g~lt~~~~~~~sDGAaavvL~s~e~A~~~g~~~~a~I~g~~------------------------------------  269 (385)
T TIGR02445       226 PKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRARIRSMA------------------------------------  269 (385)
T ss_pred             CCCCceecccCCCcCCceEEEEEecHHHHHHCCCCeeEEEEEEE------------------------------------
Confidence            20      122347899999999999999988989999999886                                    


Q ss_pred             hhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHH
Q psy5293         180 QISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIE  259 (359)
Q Consensus       180 ~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E  259 (359)
                                                 ...     ..|...+..+..+++++|+++|++|+|||++|+|+.++. .+...
T Consensus       270 ---------------------------~~~-----~~~~~~~~~~~~a~~~al~~AGi~p~DId~~Ei~daFa~-~~l~~  316 (385)
T TIGR02445       270 ---------------------------VAG-----CDPSIMGYGPVPATQKALKRAGLSISDIDVFELNEAFAA-QALPC  316 (385)
T ss_pred             ---------------------------EcC-----CCCcccchhHHHHHHHHHHHcCCCHHHcCEEEEccccHH-HHHHH
Confidence                                       110     011122235678999999999999999999999999985 44556


Q ss_pred             HHHHHhhcC-CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEE
Q psy5293         260 LKAIGSLFP-AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVA  338 (359)
Q Consensus       260 ~~al~~~~~-~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (359)
                      +++|+.+-. ..++++.+....+|||.||||+++++.+++.|++                              .+.|++
T Consensus       317 ~e~lg~~~~g~~~vN~~GG~la~GhP~GATG~r~v~~l~~~l~~------------------------------~~~~~G  366 (385)
T TIGR02445       317 LKDLGLLDKMDEKVNLNGGAIALGHPLGCSGARISTTLLNLMEQ------------------------------KDATFG  366 (385)
T ss_pred             HHHcCCCCCCCCCcCCCCchhhcCCCccccHHHHHHHHHHHHHh------------------------------cCCCeE
Confidence            666654322 2466677776677999999999999999966651                              126899


Q ss_pred             EEeCcCcCcceeeEEEeec
Q psy5293         339 LKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       339 ~~~~~g~gG~~~~~il~~~  357 (359)
                      +.++.+-+|...++|||++
T Consensus       367 l~~~~~g~g~g~a~~~e~~  385 (385)
T TIGR02445       367 LATMCIGLGQGIATVFERV  385 (385)
T ss_pred             EEEEecccChhheEEEEeC
Confidence            9999999999999999974

This subunit of the FadBA complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit. This protein is almost always located adjacent to FadB (TIGR02437). The FadBA complex is the major complex active for beta-oxidation of fatty acids in E. coli.

>PRK09051 beta-ketothiolase; Provisional

Probab=99.87  E-value=6.6e-21  Score=183.83  Aligned_cols=233  Identities=27%  Similarity=0.343  Sum_probs=164.5

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH-H------------HHHh-h
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI-A------------AFCR-V   86 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~-~------------~~~~-~   86 (359)
                      ++..++..+|+.  .|+++|+++| ||+.|+..|+++|++|.+|++||+|+|++...... .            .+.. .
T Consensus        67 ~a~~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLvvG~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~  146 (394)
T PRK09051         67 LSRVAAINAGVPQETPAFNVNRLCGSGLQAIVSAAQAILLGDADVAIGGGAESMSRAPYLLPAARWGARMGDAKLVDMMV  146 (394)
T ss_pred             HHHHHHHHcCCCCCCceEEecccchHHHHHHHHHHHHHHcCCCCEEEEEeehhcccCcccccccccccccCCchhhhhhc
Confidence            455677778985  5999999999 99999999999999999999999999987643110 0            0000 0


Q ss_pred             ccccccC-------------------------------------------CC----------------CCCCCC------
Q psy5293          87 RALATQF-------------------------------------------NN----------------EPAQAS------  101 (359)
Q Consensus        87 ~~l~~~~-------------------------------------------~~----------------~~~~~~------  101 (359)
                      ..+...+                                           .+                +|+...      
T Consensus       147 ~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~avksh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~~~da~~r~~~t~  226 (394)
T PRK09051        147 GALHDPFGTIHMGVTAENVAAKYGISREAQDALALESHRRAAAAIAAGYFKDQIVPVEIKTRKGEVVFDTDEHVRADTTL  226 (394)
T ss_pred             ccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeecCCCCCeEECCCCCCCCCCCH
Confidence            0000000                                           00                122222      


Q ss_pred             ------CCccCCCCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcch
Q psy5293         102 ------RPFDKRRDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYF  168 (359)
Q Consensus       102 ------~~fd~~~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~  168 (359)
                            +|+.....|.+       ++||+++++|++.+.+.+.+.+++++|++.+                         
T Consensus       227 e~v~~~~~v~~~~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~g~~~~~~I~g~~-------------------------  281 (394)
T PRK09051        227 EDLAKLKPVFKKENGTVTAGNASGINDGAAAVVLAEADAAEARGLKPLARLVGYA-------------------------  281 (394)
T ss_pred             HHHcCCCCcccCCCccEeCCcCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEE-------------------------
Confidence                  12221111322       5799999999999999988999989999876                         


Q ss_pred             hhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy5293         169 VTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAH  248 (359)
Q Consensus       169 ~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h  248 (359)
                                                            ...     ..|.....+...+++++|+++|++|+|||++|.|
T Consensus       282 --------------------------------------~~~-----~~~~~~~~~~~~a~~~al~~agi~~~did~~ei~  318 (394)
T PRK09051        282 --------------------------------------HAG-----VDPEYMGIGPVPATQKALERAGLTVADLDVIEAN  318 (394)
T ss_pred             --------------------------------------Eec-----cCCCcccccHHHHHHHHHHHcCCCHHHcCEEEec
Confidence                                                  111     1222233566889999999999999999999999


Q ss_pred             cCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCccc
Q psy5293         249 ATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVT  328 (359)
Q Consensus       249 ~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~  328 (359)
                      +.++. ......+.++..  ..++++++.+..+|||+||||+.+++++++||+                       +   
T Consensus       319 d~f~~-~~~~~~e~lg~~--~~~vN~~GG~~a~Ghp~gAsG~~~~~~~~~~L~-----------------------~---  369 (394)
T PRK09051        319 EAFAA-QACAVTRELGLD--PAKVNPNGSGISLGHPVGATGAIITVKALYELQ-----------------------R---  369 (394)
T ss_pred             CccHH-HHHHHHHHhCCC--ccccCCCccHHHhcchHHHHHHHHHHHHHHHHH-----------------------h---
Confidence            87653 222233333221  346677777777899999999999999999998                       2   


Q ss_pred             ccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         329 EWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       329 ~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                          .+.++++++...-||...++|||+.
T Consensus       370 ----~~~~~g~~~~c~~gG~g~a~~~e~~  394 (394)
T PRK09051        370 ----IGGRYALVTMCIGGGQGIAAIFERL  394 (394)
T ss_pred             ----cCCCEEEEEEccccChhhEEEEEeC
Confidence                1257899999989999999999974

>TIGR02430 pcaF beta-ketoadipyl CoA thiolase

Probab=99.87  E-value=2.1e-21  Score=187.21  Aligned_cols=233  Identities=25%  Similarity=0.276  Sum_probs=163.4

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH-------H------------
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI-------A------------   81 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~-------~------------   81 (359)
                      ++..++..+|+.  -|+++|+++| ||+.|+..|+++|++|++|++||+|+|+|......       .            
T Consensus        66 ~ar~~~~~~Gl~~~~p~~~V~~~CaSG~~Ai~~a~~~I~sG~~d~~la~G~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~  145 (400)
T TIGR02430        66 VARMAALLAGLPVSVPGTTVNRLCGSGLDAIGMAARAIKAGEADLLIAGGVESMSRAPFVMGKADSAFSRSAKIEDTTIG  145 (400)
T ss_pred             HHHHHHHHcCCCCCCceEEeechhhhHHHHHHHHHHHHHCCCCCEEEEeccccccCCccccccccccccccccccccccc
Confidence            577799999996  4999999999 99999999999999999999999999998643200       0            


Q ss_pred             ---------H-HH-------------hhcc-------cc--------------------------ccCC----CCCCCCC
Q psy5293          82 ---------A-FC-------------RVRA-------LA--------------------------TQFN----NEPAQAS  101 (359)
Q Consensus        82 ---------~-~~-------------~~~~-------l~--------------------------~~~~----~~~~~~~  101 (359)
                               . +.             ..+.       +.                          +..+    .+|+...
T Consensus       146 ~~~~~~~~~~~~~~~~M~~~ae~~a~~ygisre~~d~~A~~Sh~~a~~a~~~g~~~~ei~pv~vk~~~~~~~~~n~da~~  225 (400)
T TIGR02430       146 WRFINPLMKALYGVDSMPETAENVAEEFGISREDQDAFALRSQQRTAAAQASGFFAEEIVPVVIPQKKGEPTVVDQDEHP  225 (400)
T ss_pred             ccccCcccccccccCcHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCCcceEEEEEeccCCCCceeeCCCCcc
Confidence                     0 00             0000       00                          0000    1222211


Q ss_pred             C-------------CccC-----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccc
Q psy5293         102 R-------------PFDK-----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNK  163 (359)
Q Consensus       102 ~-------------~fd~-----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~  163 (359)
                      +             .|++     ..+...++||+++++|++.+.+.+++.+++++|++++                    
T Consensus       226 r~~~t~e~l~~~~~v~~p~g~lt~~~~s~~~DGAaa~vl~s~e~A~~~g~~~~~~I~g~~--------------------  285 (400)
T TIGR02430       226 RPETTLEGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRARILAAA--------------------  285 (400)
T ss_pred             CCCCCHHHHhcCCCcccCCCCEeccccCCcCCceEEEEEecHHHHHHCCCCccEEEEEEE--------------------
Confidence            1             1221     1122337899999999999999988888888998875                    


Q ss_pred             cCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCcc
Q psy5293         164 LSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDIS  243 (359)
Q Consensus       164 ~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~  243 (359)
                                                                 ...     ..|.+.+.+...+++++|+++|++|+|||
T Consensus       286 -------------------------------------------~~~-----~~~~~~~~~~~~a~~~al~~Agl~~~DID  317 (400)
T TIGR02430       286 -------------------------------------------TAG-----VEPRIMGIGPVPATQKLLARAGLSIDQFD  317 (400)
T ss_pred             -------------------------------------------Eec-----CCCccccchHHHHHHHHHHHhCCCHHHCC
Confidence                                                       111     12223335668899999999999999999


Q ss_pred             EEEeccCCCCcccHHHHHHHHhhcCCCCceecccccc--cchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCC
Q psy5293         244 YINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGA--HGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY  321 (359)
Q Consensus       244 ~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~--~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~  321 (359)
                      ++|.|+.++. ......+.++.+  ....||+..++.  +|||+||+|+.+++++++||+                    
T Consensus       318 ~~ei~D~f~~-~~l~~~e~lG~~--~~~~pvN~~GG~la~GHp~gasG~~~~~e~~~qLr--------------------  374 (400)
T TIGR02430       318 VIELNEAFAA-QALAVLRELGLA--DDDARVNPNGGAIALGHPLGASGARLVLTALRQLE--------------------  374 (400)
T ss_pred             CcccCcHHHH-HHHHHHHHcCCC--CCCCeECCCCchHhccChHHHHHHHHHHHHHHHHH--------------------
Confidence            9996665542 111222222221  234688888775  799999999999999999998                    


Q ss_pred             CCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                         ++       +.++++++...-||...++|||++
T Consensus       375 ---~~-------~~~~g~~~~c~~gG~g~a~~~e~~  400 (400)
T TIGR02430       375 ---RS-------GGRYALCTMCIGVGQGIALAIERV  400 (400)
T ss_pred             ---hc-------CCCEEEEEEccccChhhEEEEEeC
Confidence               21       257899998888999999999974

Members of this family are designated beta-ketoadipyl CoA thiolase, an enzyme that acts at the end of pathways for the degradation of protocatechuate (from benzoate and related compounds) and of phenylacetic acid.

>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.87  E-value=2.6e-21  Score=186.99  Aligned_cols=232  Identities=26%  Similarity=0.318  Sum_probs=166.3

Q ss_pred             HHHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHH---------------Hh
Q psy5293          24 PAGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAF---------------CR   85 (359)
Q Consensus        24 ~a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~---------------~~   85 (359)
                      ++.+++..+|++.  |.++|+++| |++.+|..|+++|++|++|.+||+|+|.+.........               ..
T Consensus        61 ~a~~v~~~lGl~~~~~~~~v~~~c~s~~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~  140 (386)
T cd00751          61 PARQAALLAGLPESVPATTVNRVCGSGLQAVALAAQSIAAGEADVVVAGGVESMSRAPYLLPKARRGGRLGLNTLDGMLD  140 (386)
T ss_pred             HHHHHHHHcCCCCCCchhhhccccHHHHHHHHHHHHHHHCCCCCeEEEeeeeccccCcccccccccccccCccccccccc
Confidence            4667899999974  999999999 99999999999999999999999999976332100000               00


Q ss_pred             hccc-----------cccC------------------------CCC-----------------------CCCCCC-----
Q psy5293          86 VRAL-----------ATQF------------------------NNE-----------------------PAQASR-----  102 (359)
Q Consensus        86 ~~~l-----------~~~~------------------------~~~-----------------------~~~~~~-----  102 (359)
                      .+..           +..+                        +.+                       |+...+     
T Consensus       141 ~~~~~~~~~~~~a~~a~~~~~~yg~tre~la~vav~~~~~a~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~a~~r~~~t~  220 (386)
T cd00751         141 DGLTDPFTGLSMGITAENVAEKYGISREEQDEFALRSHQRAAAAQEAGRFKDEIVPVEVPGRKGPVVVDRDEGPRPDTTL  220 (386)
T ss_pred             cccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEEEEEeccCCCCeEeCCCCCCCCCCCH
Confidence            0000           0000                        000                       010000     


Q ss_pred             -------C-ccC-----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchh
Q psy5293         103 -------P-FDK-----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFV  169 (359)
Q Consensus       103 -------~-fd~-----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~  169 (359)
                             + |++     .-+...++||+++++|++.+.+.+++++++++|.+++                          
T Consensus       221 e~v~~s~~i~~p~g~l~~~d~~~~~dGaaavvl~s~~~a~~~~~~~~~~I~g~~--------------------------  274 (386)
T cd00751         221 EKLAKLKPAFKKDGTVTAGNASGINDGAAAVLLMSEEKAKELGLKPLARIVGYA--------------------------  274 (386)
T ss_pred             HHHhCCCCCcCCCCcEeCCcCCCCCcceEEEEEecHHHHHHCCCCeeEEEEEEE--------------------------
Confidence                   1 111     1122336899999999999999989999999999886                          


Q ss_pred             hcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q psy5293         170 TRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHA  249 (359)
Q Consensus       170 ~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~  249 (359)
                                                           ...+.     +.....+...+++++|++++++|+|||++|.|+
T Consensus       275 -------------------------------------~~~~~-----~~~~~~~~~~a~~~a~~~Agi~~~did~~e~~d  312 (386)
T cd00751         275 -------------------------------------VAGVD-----PAIMGIGPVPAIPKALKRAGLTLDDIDLIEINE  312 (386)
T ss_pred             -------------------------------------EccCC-----CcccchhHHHHHHHHHHHcCCCHHHcCEEEeec
Confidence                                                 11111     112224567899999999999999999999999


Q ss_pred             CCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccc
Q psy5293         250 TSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTE  329 (359)
Q Consensus       250 ~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~  329 (359)
                      +++. .+....+.++.+  ..++++.+.+..+|||.+|+|+.+++++++||+                       ++   
T Consensus       313 ~f~~-~~~~~~e~lg~~--~~pvn~~GG~l~~Gh~~gasG~~~~~e~~~qL~-----------------------g~---  363 (386)
T cd00751         313 AFAA-QALACLKELGLD--PEKVNVNGGAIALGHPLGASGARIVVTLLHELK-----------------------RR---  363 (386)
T ss_pred             hhHH-HHHHHHHHhCCC--hhhcCCCcchHhhCccHHHHHHHHHHHHHHHHH-----------------------hc---
Confidence            8873 333344444332  236777888888899999999999999999998                       22   


Q ss_pred             cccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         330 WKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       330 ~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                          +.|+++++..+.||..+++|||+
T Consensus       364 ----~~~~gl~~~~~~gg~g~~~~ie~  386 (386)
T cd00751         364 ----GGRYGLATMCIGGGQGAAMVIER  386 (386)
T ss_pred             ----CCCEEEEEEcccccceEEEEEEC
Confidence                36899999999999999999985

They are found in prokaryotes and eukaryotes (cytosol, microbodies and mitochondria). There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PLN02287 3-ketoacyl-CoA thiolase

Probab=99.87  E-value=7.4e-21  Score=185.69  Aligned_cols=234  Identities=19%  Similarity=0.198  Sum_probs=167.6

Q ss_pred             HHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH------H---H-------h
Q psy5293          25 AGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA------F---C-------R   85 (359)
Q Consensus        25 a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~------~---~-------~   85 (359)
                      +..++..+|+..  |.++|+++| ||+.|+..|+++|++|.+|++||+|+|+|........      +   .       .
T Consensus       112 ~r~~a~~~Gl~~~~pa~~V~~~CaSG~~Ai~~Aa~~I~sG~~dvvLv~GvE~mS~~p~~~~~~~~~~~~~~~~~~~~~~~  191 (452)
T PLN02287        112 CRMAAFYAGFPETVPVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGVESMTTNPMAWEGGVNPRVESFSQAQDCLLP  191 (452)
T ss_pred             HHHHHHHCCCCCCcceEEEeccCchHHHHHHHHHHHHHcCCCCeEEEEeEEecCCCchhhccccCchhhccccccccCcC
Confidence            456777889974  999999999 9999999999999999999999999998754321000      0   0       0


Q ss_pred             hccccc----cCC------------------CCCCC-CC-----------------------------------------
Q psy5293          86 VRALAT----QFN------------------NEPAQ-AS-----------------------------------------  101 (359)
Q Consensus        86 ~~~l~~----~~~------------------~~~~~-~~-----------------------------------------  101 (359)
                      ++....    .+.                  .+|.. ..                                         
T Consensus       192 ~g~~a~~y~~~yGitrE~la~vAvksh~nAa~np~ag~f~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~~~e~l~~  271 (452)
T PLN02287        192 MGITSENVAERFGVTREEQDQAAVESHRKAAAATASGKFKDEIVPVHTKIVDPKTGEEKPIVISVDDGIRPNTTLADLAK  271 (452)
T ss_pred             HHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeeeeccccccccCCccceeecccCCCCCCCCHHHHhc
Confidence            000000    000                  01110 00                                         


Q ss_pred             -C-CccCC-----CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293         102 -R-PFDKR-----RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus       102 -~-~fd~~-----~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                       + .|++.     .+...++||+++++|.+.+.+.+.+.+|++++.++.                               
T Consensus       272 l~~v~~~~g~lt~~~~s~~sDGAaalvl~see~A~~~~~~~~a~~~~~~-------------------------------  320 (452)
T PLN02287        272 LKPVFKKNGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPILGVFRSFA-------------------------------  320 (452)
T ss_pred             CCCccCCCCCEeccccCCcCCceEEEEEeeHHHHHHCCCCeEEEEEEEe-------------------------------
Confidence             0 01110     122347899999999999999888888888887764                               


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCc
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPL  254 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~  254 (359)
                                                      ..     ...|...+.+...+++++|+++|++|+|||++|.|+.++. 
T Consensus       321 --------------------------------~~-----~~~~~~~~~~~~~A~~~al~~Agl~~~DID~~Ei~daFa~-  362 (452)
T PLN02287        321 --------------------------------AV-----GVDPAVMGIGPAVAIPAAVKAAGLELDDIDLFEINEAFAS-  362 (452)
T ss_pred             --------------------------------ec-----cCCCccchHHHHHHHHHHHHHcCCCHHHCCEEEecchHHH-
Confidence                                            10     0123344456789999999999999999999999877763 


Q ss_pred             ccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCC
Q psy5293         255 GDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDG  334 (359)
Q Consensus       255 ~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (359)
                      .+...++.|+.+  ..++++++.+..+|||+||||+.+++++++||++                       +       +
T Consensus       363 ~~l~~~e~lG~~--~~pvN~sGG~la~GHp~gAsG~~~v~~l~~qL~~-----------------------~-------~  410 (452)
T PLN02287        363 QFVYCCKKLGLD--PEKVNVNGGAIALGHPLGATGARCVATLLHEMKR-----------------------R-------G  410 (452)
T ss_pred             HHHHHHHHcCCC--ccccCCCCcHHhccCcHHHHHHHHHHHHHHHHHh-----------------------c-------C
Confidence            234444444432  3578889999999999999999999999999982                       1       1


Q ss_pred             c--cEEEEeCcCcCcceeeEEEeecCC
Q psy5293         335 R--RVALKNSFGFGGTNACLCIAEYKS  359 (359)
Q Consensus       335 ~--~~~~~~~~g~gG~~~~~il~~~~~  359 (359)
                      .  ++++++...-||...++|||+.+|
T Consensus       411 ~~~~~gl~~~c~ggG~g~a~~ie~~~~  437 (452)
T PLN02287        411 KDCRFGVVSMCIGTGMGAAAVFERGDS  437 (452)
T ss_pred             CCCCeeEEEEccccCceeEEEEEecCc
Confidence            4  789999998999999999999865

>PRK07108 acetyl-CoA acetyltransferase; Provisional

Probab=99.86  E-value=6.6e-21  Score=183.71  Aligned_cols=233  Identities=19%  Similarity=0.240  Sum_probs=169.2

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH----------HHH------HH
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS----------IAA------FC   84 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~----------~~~------~~   84 (359)
                      ++.+++..+|+.  .|+++|+++| ||+.||..|+++|++|++|++||+|+|+|+....          +..      +.
T Consensus        67 ~a~~i~~~lGl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vlagGvE~ms~~p~~~~~~~~~~~~~~~~~~~~~~  146 (392)
T PRK07108         67 IARQIALRAGLPVTVPGMTVNRFCSSGLQTIALAAQRVIAGEGDVFVAGGVESISCVQNEMNRHMLREGWLVEHKPEIYW  146 (392)
T ss_pred             HHHHHHHHcCCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCCCcCCCcCccchhhhccCCcccc
Confidence            688999999986  6999999999 9999999999999999999999999999764210          000      00


Q ss_pred             hhccc----------cc---------------------cC----------C--CCCCCC---------------------
Q psy5293          85 RVRAL----------AT---------------------QF----------N--NEPAQA---------------------  100 (359)
Q Consensus        85 ~~~~l----------~~---------------------~~----------~--~~~~~~---------------------  100 (359)
                      .++..          ++                     .+          +  .+|...                     
T Consensus       147 ~m~~~ae~~a~~~~i~r~~~d~~a~~s~~~A~~A~k~g~~~~ei~pv~~~~~~~n~~a~~~~~~~~~~~~de~~r~~~t~  226 (392)
T PRK07108        147 SMLQTAENVAKRYGISKERQDEYGVQSQQRAAAAQAAGRFDDEIVPITVTAGVADKATGRLFTKEVTVSADEGIRPDTTL  226 (392)
T ss_pred             CHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCceeeEEecccccccccCcccccceeEccCCCCCCCCCH
Confidence            00000          00                     00          0  011110                     


Q ss_pred             -----C-CCccC----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhh
Q psy5293         101 -----S-RPFDK----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVT  170 (359)
Q Consensus       101 -----~-~~fd~----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  170 (359)
                           . .+|..    ..+...++||++++++++.+.+.+.+.+++++|++++                           
T Consensus       227 e~l~~l~~~~~~g~lt~~n~~~~~DGAaa~vl~s~~~A~~~g~~~~~~i~g~~---------------------------  279 (392)
T PRK07108        227 EGVSKIRSALPGGVITAGNASQFSDGASACVVMNAKVAEREGLQPLGIFRGFA---------------------------  279 (392)
T ss_pred             HHHhcCCCCCCCCCCcCCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEE---------------------------
Confidence                 0 11200    0122337899999999999999999989989999876                           


Q ss_pred             cccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccC
Q psy5293         171 RILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT  250 (359)
Q Consensus       171 ~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~  250 (359)
                                                          ...     ..|++.+.+...+++++|+++|++|+|||++|.|+.
T Consensus       280 ------------------------------------~~~-----~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~ea  318 (392)
T PRK07108        280 ------------------------------------VAG-----CEPDEMGIGPVFAVPKLLKQAGLKVDDIDLWELNEA  318 (392)
T ss_pred             ------------------------------------Eec-----cCCcccchhHHHHHHHHHHHcCCCHHHcCchHhhhH
Confidence                                                211     123444457789999999999999999999998876


Q ss_pred             CCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCccccc
Q psy5293         251 STPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEW  330 (359)
Q Consensus       251 ~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~  330 (359)
                      ++. .+...++.|+.+  ..++++++.+..+|||+||+|++.++.++++|++                            
T Consensus       319 fa~-~~l~~~e~lg~~--~~~vN~~GG~~a~GHp~gatG~r~~~~l~~~l~~----------------------------  367 (392)
T PRK07108        319 FAV-QVLYCRDTLGIP--MDRLNVNGGAIAVGHPYGVSGARLTGHALIEGKR----------------------------  367 (392)
T ss_pred             HHH-HHHHHHHhcCCC--ccccCCCCChHHhCcchhhhHHHHHHHHHHHHHh----------------------------
Confidence            653 223333444322  3578899999999999999999999999999982                            


Q ss_pred             ccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         331 KTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       331 ~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                        .+.++++++...-||...++|||+.
T Consensus       368 --~~~~~g~~~~c~~gg~g~a~~ie~~  392 (392)
T PRK07108        368 --RGAKYVVVTMCIGGGQGAAGLFEVL  392 (392)
T ss_pred             --hCCCEEEEEEccccChhhEEEEEeC
Confidence              1257899999999999999999973

>PRK09050 beta-ketoadipyl CoA thiolase; Validated

Probab=99.86  E-value=7.2e-21  Score=183.70  Aligned_cols=233  Identities=24%  Similarity=0.285  Sum_probs=163.4

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH-----HHH-------Hh---
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI-----AAF-------CR---   85 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~-----~~~-------~~---   85 (359)
                      ++..++...|+.  -|+++|+++| ||+.|+..|+++|++|++|++||+|+|+|+.....     ..+       ..   
T Consensus        67 ~ar~~~~~~Gl~~~vP~~tV~~aCaSG~~Ai~~A~~~I~sG~~dvvlagGvEsmS~~p~~~~~~~~~~~~~~~~~~~~~~  146 (401)
T PRK09050         67 VARMSALLAGLPVSVPGTTINRLCGSGMDAVGTAARAIKAGEAELMIAGGVESMSRAPFVMGKADSAFSRQAEIFDTTIG  146 (401)
T ss_pred             HHHHHHHHcCCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEecccccccCcccccchhhhcccCccccccccc
Confidence            466789999994  5999999999 99999999999999999999999999998653210     000       00   


Q ss_pred             -----h---cccc------------------ccC---------------CCC-----------------------CCCCC
Q psy5293          86 -----V---RALA------------------TQF---------------NNE-----------------------PAQAS  101 (359)
Q Consensus        86 -----~---~~l~------------------~~~---------------~~~-----------------------~~~~~  101 (359)
                           .   ....                  +..               .++                       |+...
T Consensus       147 ~~~~~~~~~~~~~~~~Mg~~ae~~a~~~gisre~~D~~A~~S~k~a~~A~~ng~~~~ei~p~~~~~~~~~~~~~~~da~~  226 (401)
T PRK09050        147 WRFVNPLMKAQYGVDSMPETAENVAEDYNISRADQDAFALRSQQRAAAAQAAGFLAEEIVPVTIPQKKGDPVVVDRDEHP  226 (401)
T ss_pred             ccccCCccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeeeccCCCCceeeCCCCCC
Confidence                 0   0000                  000               001                       11111


Q ss_pred             ------------CC-ccCC-----CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccc
Q psy5293         102 ------------RP-FDKR-----RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNK  163 (359)
Q Consensus       102 ------------~~-fd~~-----~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~  163 (359)
                                  +| |++.     .+...+.||+++++|++.+.+.+.+.+++++|+|++                    
T Consensus       227 r~~~t~e~l~~l~~~~~~~g~lt~~n~s~~~DGAaa~vl~s~~~A~~lg~~p~a~I~g~~--------------------  286 (401)
T PRK09050        227 RPETTLEALAKLKPVFRPDGTVTAGNASGVNDGAAALLLASEAAAKKHGLTPRARILGMA--------------------  286 (401)
T ss_pred             CCCCCHHHHhcCCCcccCCCEEeCCCcCCCcCceEEEEEecHHHHHHCCCCccEEEEEEE--------------------
Confidence                        11 2221     122237899999999999999988888888998876                    


Q ss_pred             cCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCcc
Q psy5293         164 LSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDIS  243 (359)
Q Consensus       164 ~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~  243 (359)
                                                                 ...     ..|...+.+...+++++|+++|++|+|||
T Consensus       287 -------------------------------------------~~~-----~~~~~~~~~~~~a~~~al~~Agl~~~DId  318 (401)
T PRK09050        287 -------------------------------------------TAG-----VEPRIMGIGPAPATRKLLARLGLTIDQFD  318 (401)
T ss_pred             -------------------------------------------Eec-----cCCccccchHHHHHHHHHHHcCCCHHHCC
Confidence                                                       111     11222234567899999999999999999


Q ss_pred             EEEeccCCCCcccHHHHHHHHhhcCCCCceecccccc--cchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCC
Q psy5293         244 YINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGA--HGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY  321 (359)
Q Consensus       244 ~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~--~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~  321 (359)
                      ++|.|+.++. ......+.++.+  ...+||+..++.  +|||.||+|+.+++++++||+                    
T Consensus       319 ~~ei~D~f~~-~~l~~~e~lg~~--~~~~pvN~~GG~la~Ghp~gasG~~~~~e~~~qLr--------------------  375 (401)
T PRK09050        319 VIELNEAFAA-QGLAVLRQLGLA--DDDARVNPNGGAIALGHPLGMSGARLVLTALHQLE--------------------  375 (401)
T ss_pred             ccccCcHhHH-HHHHHHHHcCCC--CCCCCEeCCCchHhcCCchhHHHHHHHHHHHHHHH--------------------
Confidence            9997766552 122223333222  234678777775  699999999999999999998                    


Q ss_pred             CCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                         ++       +.++++++...-||...++|||++
T Consensus       376 ---~~-------~~~~g~~~~c~~gG~g~a~~~e~~  401 (401)
T PRK09050        376 ---RT-------GGRYALCTMCIGVGQGIALAIERV  401 (401)
T ss_pred             ---hc-------CCCeEEEEEcccccceeEEEEEeC
Confidence               21       257899999999999999999973

>PRK08131 acetyl-CoA acetyltransferase; Provisional

Probab=99.86  E-value=8e-21  Score=183.41  Aligned_cols=233  Identities=24%  Similarity=0.265  Sum_probs=160.1

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHH------------HHHh-hc
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIA------------AFCR-VR   87 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~------------~~~~-~~   87 (359)
                      ++.+++...|+.  .|.++|+++| ||+.|+..|+++|++|++|++||+|+|+|.......            .+.. .+
T Consensus        66 ~ar~~~~~~Glp~~~p~~tV~~~CaSG~~Ai~~A~~~I~sG~~dvvlagG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~  145 (401)
T PRK08131         66 VARNALLLAGLPVTVPGQTVNRLCASGLAAVIDAARAITCGEGDLYLAGGVESMSRAPFVMGKAESAFSRDAKVFDTTIG  145 (401)
T ss_pred             HHHHHHHhcCCCCCCceeeeechhhhHHHHHHHHHHHHHCCCCCEEEEEEecCCCCCcccccccccccccCcchhhhhhc
Confidence            355688889986  5999999999 999999999999999999999999999976432100            0000 00


Q ss_pred             -------c---cc--------c----cC---------------------CCCC--CCCCCCc-------------cC---
Q psy5293          88 -------A---LA--------T----QF---------------------NNEP--AQASRPF-------------DK---  106 (359)
Q Consensus        88 -------~---l~--------~----~~---------------------~~~~--~~~~~~f-------------d~---  106 (359)
                             .   ..        .    .+                     ..++  ...-.|.             +.   
T Consensus       146 ~~~~~~~~~~~~a~~~mg~~ae~~~~~ygitre~~d~vA~~S~~~~~~a~~~~~~~~~i~pi~v~~~~~~~~~~v~~De~  225 (401)
T PRK08131        146 ARFPNPKIVAQYGNDSMPETGDNVAAEFGISREDADRFAAQSQAKYQAAKEEGFFADEITPIEVPQGRKLPPKLVAEDEH  225 (401)
T ss_pred             ccccCcccccccccCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhCCCCCCceeeEEeccccCCCceEEecCCC
Confidence                   0   00        0    00                     0000  0000011             10   


Q ss_pred             -----------------C------CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccc
Q psy5293         107 -----------------R------RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNK  163 (359)
Q Consensus       107 -----------------~------~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~  163 (359)
                                       +      .+...+.||++++++.+.+.+.+.+.+++++|++++                    
T Consensus       226 ~r~~~~~e~L~~l~p~f~~g~lt~~~~s~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~--------------------  285 (401)
T PRK08131        226 PRPSSTVEALTKLKPLFEGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSA--------------------  285 (401)
T ss_pred             CCCCCCHHHHhcCCCCCCCCCccCCcCCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEE--------------------
Confidence                             0      022336899999999999999888888888888876                    


Q ss_pred             cCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCcc
Q psy5293         164 LSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDIS  243 (359)
Q Consensus       164 ~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~  243 (359)
                                                                 ...+     .|.....+...+++++|+++|++|+|||
T Consensus       286 -------------------------------------------~~~~-----~~~~~~~~~~~a~~~a~~~agl~~~did  317 (401)
T PRK08131        286 -------------------------------------------AAGV-----EPRIMGIGPVEAIKKALARAGLTLDDMD  317 (401)
T ss_pred             -------------------------------------------Eecc-----CCccccchHHHHHHHHHHHcCCCHHHCC
Confidence                                                       1111     2222335668899999999999999999


Q ss_pred             EEEeccCCCCcccHHHHHHHHhhcCCCCceeccccc--ccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCC
Q psy5293         244 YINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKG--AHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY  321 (359)
Q Consensus       244 ~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~  321 (359)
                      ++|.|+.++. .+...++.++.++  ..+||+..++  .+|||.||||+.+++++++||+                    
T Consensus       318 ~~ei~d~Fa~-~~l~~~e~lg~~~--~~~~vN~~GG~la~GhP~gAtG~~~~~el~~qL~--------------------  374 (401)
T PRK08131        318 IIEINEAFAS-QVLGCLKGLGVDF--DDPRVNPNGGAIAVGHPLGASGARLALTAARELQ--------------------  374 (401)
T ss_pred             eehhccHHHH-HHHHHHHHcCCCC--CCCCccCCccHHhcCCchhhhHHHHHHHHHHHHH--------------------
Confidence            9999988874 3344455554433  2455555555  5699999999999999999998                    


Q ss_pred             CCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                         ++.       .+++++....-+|+..++|||+.
T Consensus       375 ---~~~-------~~~~~~~~~~ggg~g~a~i~e~~  400 (401)
T PRK08131        375 ---RRG-------KRYAVVSLCIGVGQGLAMVIERV  400 (401)
T ss_pred             ---hcC-------CCceEEEEEecCChhhEEEEEec
Confidence               321       24566666667788899999984

>PRK06158 thiolase; Provisional

Probab=99.86  E-value=1.6e-20  Score=181.07  Aligned_cols=243  Identities=17%  Similarity=0.122  Sum_probs=164.2

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEe-eeCCCCCH-----------H----------H
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG-AAESCISQ-----------L----------S   79 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvg-g~e~~~~~-----------~----------~   79 (359)
                      +...++..+|++. |.+.++++| |++.+|..|+++|++|.+|++||+ |.+.+...           +          .
T Consensus        63 ~~~~la~~lGl~~~~~~~~~~g~~s~~~al~~A~~~I~sG~~d~vLV~~g~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~  142 (384)
T PRK06158         63 WGLSVAEYLGIRPRFVDGTMIGGSSFLAHLLPAALALEAGLCDVALICYGSNQRSAGGKLRSMLDPQPYEAPYKPVNPVS  142 (384)
T ss_pred             cHHHHHHHcCCCCeeeccccCccHHHHHHHHHHHHHHHcCCCCEEEEeeccccccCcccccccccccchhcccCCCCcHH
Confidence            4557889999976 888899999 999999999999999999999985 66643210           0          0


Q ss_pred             HHHH------Hhhccccc-----------cCCCCCCCCC----------------CCccCCCCCceecceeeEEeecchH
Q psy5293          80 IAAF------CRVRALAT-----------QFNNEPAQAS----------------RPFDKRRDGFVMGEGSAILVLEELD  126 (359)
Q Consensus        80 ~~~~------~~~~~l~~-----------~~~~~~~~~~----------------~~fd~~~~G~~~geGa~a~~l~~~~  126 (359)
                      .+.+      ..-|....           +...+|....                .|+.. .+...++||+++++|.+.+
T Consensus       143 ~~al~a~~ym~~yG~t~e~~a~vav~~~~~a~~NP~A~~~~~~t~e~vl~s~~ia~Pl~~-~d~~~~~DGAaAvVL~s~e  221 (384)
T PRK06158        143 AYALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVSDPLSV-RDCCLVTDGAGAVVMVRAD  221 (384)
T ss_pred             HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCchhhhCCCCCHHHHhcCCccCCCCch-hhcCCccCCeEEEEEecHH
Confidence            0000      00000000           0001222111                12211 2344589999999999999


Q ss_pred             HHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccccc
Q psy5293         127 HALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG  206 (359)
Q Consensus       127 ~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig  206 (359)
                      .+.+.++++ ..|.+.+.                                                              
T Consensus       222 ~A~~l~~~~-v~i~g~~~--------------------------------------------------------------  238 (384)
T PRK06158        222 RARDLPRPP-VYVLGAAA--------------------------------------------------------------  238 (384)
T ss_pred             HHhhcCCCc-EEEEEEEE--------------------------------------------------------------
Confidence            887766554 44555541                                                              


Q ss_pred             ccCCCccC-CCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--------------CCC
Q psy5293         207 MSGDGHHL-TSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--------------AQR  271 (359)
Q Consensus       207 ~~~~~~~~-~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--------------~~~  271 (359)
                       ..+.... ..+........++++++++++|++|+|||++|+|++++. .+...+++|+.+..              +++
T Consensus       239 -~~~~~~~~~~~~~~~~~~~~aa~~A~~~AGi~p~DId~~ElyD~Fs~-~~l~~~E~lG~~~~Ge~~~~~~~G~~~~~G~  316 (384)
T PRK06158        239 -ATWHRQISSMPDLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTI-NTILFLEDLGFCAKGEGGAFVEGGRIAPGGR  316 (384)
T ss_pred             -ecCCcccccccchhhhHHHHHHHHHHHHcCCCHHHCcEEEecCCchH-HHHHHHHHcCCCCCCcHHHHHHCCCCccCCC
Confidence             0000000 011122244578999999999999999999999999995 55777777765432              456


Q ss_pred             ceeccccccc--chHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcC-cCcc
Q psy5293         272 LMVSSTKGAH--GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFG-FGGT  348 (359)
Q Consensus       272 ~~v~~~k~~~--Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~gG~  348 (359)
                      +||+...+.+  ||| ||+|+.+++++++||+                       +++.++|+++.+++++++.| .+..
T Consensus       317 ~PvN~sGG~ls~Ghp-gatG~~~~~E~~~QLr-----------------------g~ag~rQv~~a~~gl~~~~Gg~~~~  372 (384)
T PRK06158        317 LPVNTNGGGLSCVHP-GMYGLFLLIEAVRQLR-----------------------GEAGERQVAGAEVALAHGNGGVLSS  372 (384)
T ss_pred             ccccCCChhhcCCCC-chhhHHHHHHHHHHHc-----------------------CCCCCCcCCCCCEEEEECCCCcccc
Confidence            7777666555  999 9999999999999999                       77888888889999999987 4444


Q ss_pred             eeeEEEee
Q psy5293         349 NACLCIAE  356 (359)
Q Consensus       349 ~~~~il~~  356 (359)
                      +..+|+++
T Consensus       373 ~~~~vl~~  380 (384)
T PRK06158        373 QATAILGT  380 (384)
T ss_pred             eEEEEEec
Confidence            55566654

>PTZ00455 3-ketoacyl-CoA thiolase; Provisional

Probab=99.85  E-value=2.7e-20  Score=181.35  Aligned_cols=239  Identities=17%  Similarity=0.184  Sum_probs=158.5

Q ss_pred             HHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH-----------------------H-HH
Q psy5293          30 IDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI-----------------------A-AF   83 (359)
Q Consensus        30 ~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~-----------------------~-~~   83 (359)
                      ..+|+.. |.++|+++| ||+.||..|+++|++|++|++||+|+|++......                       . .+
T Consensus       104 ~~~gl~~~p~~~V~~~caSG~~Ai~~A~~~I~sG~~dvvlv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  183 (438)
T PTZ00455        104 ASNALLYKPAMRVEGACASGGLAVQSAWEALLAGTSDIALVVGVEVQTTVSARVGGDYLARAADYRRQRKLDDFTFPCLF  183 (438)
T ss_pred             cccccCCCceeEEECcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCcchhhhhhccchhhccccccccCcchHHHH
Confidence            3445554 999999999 99999999999999999999999999987542100                       0 00


Q ss_pred             Hh-hccccccC------------------CCCCCCC--CCCcc--C----------------------CCCCceecceee
Q psy5293          84 CR-VRALATQF------------------NNEPAQA--SRPFD--K----------------------RRDGFVMGEGSA  118 (359)
Q Consensus        84 ~~-~~~l~~~~------------------~~~~~~~--~~~fd--~----------------------~~~G~~~geGa~  118 (359)
                      .. +..+....                  ..+|...  .++..  .                      .-+.....||++
T Consensus       184 a~~~~ym~~~ggitrE~la~vAvka~~~a~~nP~A~~~~~~~t~~~~~d~~~~~~e~l~s~~i~~pl~~~d~s~~sDGAa  263 (438)
T PTZ00455        184 AKRMKYIQEHGHFTMEDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQVSDGGA  263 (438)
T ss_pred             HHHHHHHHHHCCCCHHHHHHHHHHHHHHHhcCCHhhccCCCCCceeeccccccchhhhcCCcccCcCchhcCCCccccce
Confidence            00 00111000                  0023211  01111  0                      111223689999


Q ss_pred             EEeecchHHHHhcCCcE----EEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCccc
Q psy5293         119 ILVLEELDHALARSANI----YAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCV  194 (359)
Q Consensus       119 a~~l~~~~~a~~~g~~i----~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~  194 (359)
                      ++++.+.+.+.+.+.++    .++|++++.                                                  
T Consensus       264 A~vl~See~A~~l~~~p~~~~~v~i~g~~~--------------------------------------------------  293 (438)
T PTZ00455        264 GLVLASEEGLQKMGLSPNDSRLVEIKSLAC--------------------------------------------------  293 (438)
T ss_pred             EEEEecHHHHHhcCCCCCCCccEEEEEEEE--------------------------------------------------
Confidence            99999999888776554    477777651                                                  


Q ss_pred             ccccccCcccccccCCCc--cCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC----
Q psy5293         195 STACATGAHAIGMSGDGH--HLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP----  268 (359)
Q Consensus       195 ~~acAsg~~aig~~~~~~--~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~----  268 (359)
                                   ..+..  ....+...... ..+++++|+++|++++|||++|+|++++. .+...++.|+.+..    
T Consensus       294 -------------~~~~~~~~~~~~~~~~~~-~~A~~~a~~~AGl~~~DiD~~Ei~daFa~-~~l~~~e~lGl~~~G~~~  358 (438)
T PTZ00455        294 -------------ASGNLYEDPPDATRMFTS-RAAAQKALSMAGVKPSDLQVAEVHDCFTI-AELLMYEALGIAEYGHAK  358 (438)
T ss_pred             -------------ecCCcccCccccccchHH-HHHHHHHHHHcCCCHHHCcEeeecccChH-HHHHHHHHcCCCCCCchH
Confidence                         10000  00000112233 68999999999999999999999999985 44666666654431    


Q ss_pred             ----------CCCcee--cccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCC-c
Q psy5293         269 ----------AQRLMV--SSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDG-R  335 (359)
Q Consensus       269 ----------~~~~~v--~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~  335 (359)
                                ++++||  ++....+|||.||+|+.+++++++||+                       ++..++|+++ .
T Consensus       359 ~~~~~G~~~~~G~~pvN~~GG~la~GHP~gAtG~~~v~e~~~QLr-----------------------g~ag~~Qv~~~~  415 (438)
T PTZ00455        359 DLIRNGATALEGRIPVNTGGGLLSFGHPVGATGVKQIMEVYRQMK-----------------------GQCGEYQMKNIP  415 (438)
T ss_pred             HHHhcCCcccCCCceeeCCCchhhcCCCcchHHHHHHHHHHHHHh-----------------------hccccCCCCCcc
Confidence                      223444  444445599999999999999999999                       6677778887 6


Q ss_pred             cEEEEeCcC-cCcceeeEEEee
Q psy5293         336 RVALKNSFG-FGGTNACLCIAE  356 (359)
Q Consensus       336 ~~~~~~~~g-~gG~~~~~il~~  356 (359)
                      ++++.++.| ++..+.+.||+.
T Consensus       416 ~~gl~~~~Gg~~~~~~~~vl~~  437 (438)
T PTZ00455        416 ALGATLNMGGDDKTAVSTVLQN  437 (438)
T ss_pred             cEEEEeccCCCcceEEEEEEec
Confidence            999999987 555666666653

>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2

Probab=99.85  E-value=5.5e-22  Score=159.87  Aligned_cols=101  Identities=41%  Similarity=0.604  Sum_probs=82.7

Q ss_pred             ccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcCCC----CceecccccccchHHHh
Q psy5293         212 HHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQ----RLMVSSTKGAHGHLLGA  287 (359)
Q Consensus       212 ~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~~~----~~~v~~~k~~~Gh~~~A  287 (359)
                      .....+.+++.+..++++++|++++++|+|||||+.|++||+.+|..|++++.++|+..    +++|++.|+++||+++|
T Consensus        15 ~~~~~~~p~~~~~~~~i~~al~~agi~~~~I~~i~~hg~Gt~~~D~~E~~ai~~~~~~~~~~~~~~v~s~K~~~Gh~~~a   94 (119)
T PF02801_consen   15 RSSSLTAPNGAALARAIRRALADAGISPEDIDYIEAHGTGTPLGDAAEAEAIARVFGDSARQQPVPVGSVKSNIGHTEAA   94 (119)
T ss_dssp             STSSSSSTTHHHHHHHHHHHHHHHTS-GGGEEEEE----SSHHHHHHHHHHHHHHHGGGGGTSTSEEE-THHHH-B-GGG
T ss_pred             CCCCCcCcCHHHHHHHHHHHHhhhccccccceeeeeeccccccchhhhhhhhhhhhcccccccccceecccccccccccc
Confidence            44455666778999999999999999999999999999999999999999999999843    49999999999999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCC
Q psy5293         288 AGNLESAFTILAVHEGLVPPNVNLE  312 (359)
Q Consensus       288 sG~~~~~~~~~~l~~~~ip~~~~~~  312 (359)
                      ||++++++++++|++++|||++|++
T Consensus        95 sG~~~l~~~~l~l~~~~ipp~~n~~  119 (119)
T PF02801_consen   95 SGLLSLAKALLALEHGTIPPTINFE  119 (119)
T ss_dssp             HHHHHHHHHHHHHHHTEE--BTT-S
T ss_pred             chHHHHHHHHHHHhcCCCCCCcCCC
Confidence            9999999999999999999999985

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the C-terminal domain of beta-ketoacyl-ACP synthases. The active site is contained in a cleft betweeen N- and C-terminal domains, with residues from both domains contributing to substrate binding and catalysis [].; PDB: 2UV8_B 3HMJ_A 2VKZ_C 4EWG_A 1TQY_H 1E5M_A 1J3N_B 2VZ8_A 2VZ9_B 3O04_A ....

>PRK09052 acetyl-CoA acetyltransferase; Provisional

Probab=99.85  E-value=4.3e-20  Score=178.32  Aligned_cols=230  Identities=23%  Similarity=0.276  Sum_probs=158.3

Q ss_pred             HHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH--------HHHHh--------
Q psy5293          25 AGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI--------AAFCR--------   85 (359)
Q Consensus        25 a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~--------~~~~~--------   85 (359)
                      +..+...+|+.  .|+++|+++| ||+.|+..|+++|++|++|++||+|+|++......        ..+..        
T Consensus        73 ar~~~~~~Gl~~~~p~~~V~~aCaSg~~Al~~A~~~I~sG~~d~vLv~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~~  152 (399)
T PRK09052         73 ARIGALLAGLPNSVGGVTVNRFCASGLQAVAMAADRIRVGEADVMIAAGVESMSMVPMMGNKPSMSPAIFARDENVGIAY  152 (399)
T ss_pred             HHHHHHHcCCCCCCceeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEEeccccCcccCcccccCcchhccCCcccccc
Confidence            44456677996  4899999999 99999999999999999999999999987543200        00000        


Q ss_pred             -hccccc---------------------------c----CCC--CCCCC--CC------------C-cc--C--------
Q psy5293          86 -VRALAT---------------------------Q----FNN--EPAQA--SR------------P-FD--K--------  106 (359)
Q Consensus        86 -~~~l~~---------------------------~----~~~--~~~~~--~~------------~-fd--~--------  106 (359)
                       ++....                           .    +..  .|...  .+            + ++  .        
T Consensus       153 ~~~~~a~~~~~~ygitre~~d~~a~~sh~~a~~n~~ag~~~~ei~~~~v~~~~~~~~~~~~~~~~~~~~~D~~~r~~~~~  232 (399)
T PRK09052        153 GMGLTAEKVAEQWKVSREDQDAFALESHQKAIAAQQAGEFKDEITPYEITERFPDLATGEVDVKTRTVDLDEGPRADTSL  232 (399)
T ss_pred             hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEeccccccccccCcccccceEeccCCCCCCCCCH
Confidence             000000                           0    000  01000  00            0 00  0        


Q ss_pred             ----------CCCC-------ceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchh
Q psy5293         107 ----------RRDG-------FVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFV  169 (359)
Q Consensus       107 ----------~~~G-------~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~  169 (359)
                                ..+|       ..++||+++++|++.+.+.+.+.+++++|++++                          
T Consensus       233 e~l~~l~p~f~~~g~lt~~n~s~~~DGAaa~vl~se~~a~~~g~~~~a~i~g~~--------------------------  286 (399)
T PRK09052        233 EGLAKLKPVFANKGSVTAGNSSQTSDGAGAVILVSEKALKQFNLTPLARFVSFA--------------------------  286 (399)
T ss_pred             HHHhcCCCccCCCCcEECCccCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEE--------------------------
Confidence                      0112       347899999999999999999989999999886                          


Q ss_pred             hcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q psy5293         170 TRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHA  249 (359)
Q Consensus       170 ~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~  249 (359)
                                                           ...     ..|...+.+...+++++|+++|++|+|||++|.|+
T Consensus       287 -------------------------------------~~~-----~~~~~~~~~~~~A~~~al~~Agi~~~did~~ei~D  324 (399)
T PRK09052        287 -------------------------------------VAG-----VPPEIMGIGPIEAIPAALKQAGLKQDDLDWIELNE  324 (399)
T ss_pred             -------------------------------------Eec-----cCCCccchhHHHHHHHHHHHcCCCHHHcCEEEeCc
Confidence                                                 111     22333445778999999999999999999999766


Q ss_pred             CCCCcccHHHHHHHHhhcCCCCceeccccc--ccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc
Q psy5293         250 TSTPLGDVIELKAIGSLFPAQRLMVSSTKG--AHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAV  327 (359)
Q Consensus       250 ~~t~~~d~~E~~al~~~~~~~~~~v~~~k~--~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~  327 (359)
                      .++. ......    +.|+....||+..++  .+|||.||+|+++++++++||++                       + 
T Consensus       325 ~f~~-~~l~~~----e~lg~~~~~vN~~GG~la~GHp~gasG~~~~~~~~~~L~~-----------------------~-  375 (399)
T PRK09052        325 AFAA-QSLAVI----RDLGLDPSKVNPLGGAIALGHPLGATGAIRTATVVHGLRR-----------------------T-  375 (399)
T ss_pred             HHHH-HHHHHH----HHhCCCCcccCCCCchhhcCchHHHHHHHHHHHHHHHHHh-----------------------c-
Confidence            5542 112222    233322345655555  66999999999999999999982                       1 


Q ss_pred             cccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         328 TEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                            +.++++++..+-||...++|||+.
T Consensus       376 ------~~~~g~~~~c~~gg~g~a~~~e~~  399 (399)
T PRK09052        376 ------NLKYGMVTMCVGTGMGAAGIFERL  399 (399)
T ss_pred             ------CCCeEEEEEcccCCceeEEEEEeC
Confidence                  257899999999999999999973

>PRK06365 acetyl-CoA acetyltransferase; Provisional

Probab=99.85  E-value=4.5e-20  Score=179.85  Aligned_cols=263  Identities=17%  Similarity=0.182  Sum_probs=158.6

Q ss_pred             HHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH--HHhh----------cc----
Q psy5293          27 AISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA--FCRV----------RA----   88 (359)
Q Consensus        27 ~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~--~~~~----------~~----   88 (359)
                      .++..+|++. |+++|+++| ||+.||..|++.|++|.+|+|||+|+|++.+......  +...          +.    
T Consensus        80 ~~~~~lGl~~~~~~~v~~~~aSg~~ai~~A~~~I~sG~~~~vLv~G~e~~s~~~~~~~~~~~~~~~d~~~~~~~g~~~~~  159 (430)
T PRK06365         80 MVQDYLGLVPKPSKRIEGGGATGGLAFQAGYEEIASGRMDCVAVYGFETMSHVNTWKGNEFIALASDTNFDYPLGGFYTG  159 (430)
T ss_pred             HHHHhcCCCCCceEEEeCCcHHHHHHHHHHHHHHHcCCCCEEEEEEeeecccccchhhhhhhcccccccccccccCccHH
Confidence            4678999986 999999999 9999999999999999999999999998655321100  0000          00    


Q ss_pred             ----ccccC----------------------CCCCCCCC-CCccCC--------------CCCceecceeeEEeecchHH
Q psy5293          89 ----LATQF----------------------NNEPAQAS-RPFDKR--------------RDGFVMGEGSAILVLEELDH  127 (359)
Q Consensus        89 ----l~~~~----------------------~~~~~~~~-~~fd~~--------------~~G~~~geGa~a~~l~~~~~  127 (359)
                          ++..+                      ..+|.... .+.+.+              -+...+.||+++++|.+.+.
T Consensus       160 ~~al~a~ry~~~yG~t~e~la~vav~~~~~A~~NP~A~~~~~~t~e~v~~s~~i~~Plt~~d~~~~sDGAaAvvl~See~  239 (430)
T PRK06365        160 YYAMMAVRHMYEFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSDGAACAILASEDK  239 (430)
T ss_pred             HHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhhCcHhhcCCCCCHHHHhcCCccccCcchhhcCCcCCceEEEEEecHHH
Confidence                00000                      00121100 111100              01122678999999999888


Q ss_pred             HHhcCCcEEEEEeecc--cccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccc
Q psy5293         128 ALARSANIYAEIIGYG--MIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAI  205 (359)
Q Consensus       128 a~~~g~~i~~~i~g~~--~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~ai  205 (359)
                      +.+.+.++.. |.+.+  ....+       ..+.. ....|..-.++.                                
T Consensus       240 A~~l~~~pv~-i~g~g~~~~~~~-------~~~~~-~~~~~~~~~~~~--------------------------------  278 (430)
T PRK06365        240 AFEITDKPVL-IKAIGTGSDTLR-------LADRP-FGEVPLLPNESP--------------------------------  278 (430)
T ss_pred             HHhcCCCCeE-EEEEEEeccccc-------ccccc-cccccccccccc--------------------------------
Confidence            8766655532 33332  00000       00000 000000000000                                


Q ss_pred             cccCCCccCCCCCc-ChHHHHHHHHHHHHHcCCC--CCCccEEEeccCCCCcccHHHHHHHHhhcC--------------
Q psy5293         206 GMSGDGHHLTSPRE-DGRGALLAMTRALIDANLS--PGDISYINAHATSTPLGDVIELKAIGSLFP--------------  268 (359)
Q Consensus       206 g~~~~~~~~~~p~~-~~~~~~~a~~~al~~agl~--~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--------------  268 (359)
                      .+..|   +..|.. .......+++++++++|++  ++|||++|+|++++. .....+++|+.+..              
T Consensus       279 ~~~~~---~~~~~~~~~~~~~~a~~~a~~~AGl~~~~~DiD~~Ei~D~Fa~-~~l~~lE~lGl~~~Ge~~~~~~~G~~~~  354 (430)
T PRK06365        279 DDYKD---LRYPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTS-SEIQTYEDLGLCKYGEGGQFIESGKPEL  354 (430)
T ss_pred             ccccc---cccccccccHHHHHHHHHHHHHcCCCCCHHHCCEEEeecCCcH-HHHHHHHHcCCCCCCchHHHHHCCCcCC
Confidence            00000   000000 1123457899999999998  899999999999985 44666677654431              


Q ss_pred             CCCceeccccccc--chHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccc------cccCCccEEEE
Q psy5293         269 AQRLMVSSTKGAH--GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTE------WKTDGRRVALK  340 (359)
Q Consensus       269 ~~~~~v~~~k~~~--Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~  340 (359)
                      ++++|||...+.+  |||.||+|+.+++++++||+                       +++.+      +|+++.+++++
T Consensus       355 ~G~~piNt~GG~la~Ghp~GatG~~~~~e~~~QLr-----------------------G~a~~~~~~~~rQv~~a~~~l~  411 (430)
T PRK06365        355 PGKLPVNPSGGLLAAGHAVGATGIMQAVFMFWQLQ-----------------------GRIKKHFHDDYLQVKNAKRGLI  411 (430)
T ss_pred             CCCccccCCCchhcCCCcccHHHHHHHHHHHHHHh-----------------------cccCCCCCcccccCCCccEEEE
Confidence            2446665555544  99999999999999999999                       55543      57888999999


Q ss_pred             eCcC-cCcceeeEEEeec
Q psy5293         341 NSFG-FGGTNACLCIAEY  357 (359)
Q Consensus       341 ~~~g-~gG~~~~~il~~~  357 (359)
                      ++.| .+..+.++||++.
T Consensus       412 ~~~gg~~~~~~~~vl~~~  429 (430)
T PRK06365        412 HSHAGTGTYVTVTILEAP  429 (430)
T ss_pred             ecCCcccceEEEEEEecC
Confidence            9987 4456667777664

>PRK07850 acetyl-CoA acetyltransferase; Provisional

Probab=99.85  E-value=2.8e-20  Score=179.12  Aligned_cols=233  Identities=18%  Similarity=0.181  Sum_probs=163.2

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH--------------H---
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA--------------F---   83 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~--------------~---   83 (359)
                      ++..++...|+.  -|+++|+++| ||++|+..|++.|++|++|++||+|+|+|........              +   
T Consensus        66 ~ar~~~l~~Gl~~~~p~~tV~~~CaSG~~A~~~A~~~I~sG~~dvvla~G~E~mS~~p~~~~~~~~~~~~~~~~~~~~~~  145 (387)
T PRK07850         66 ITRTAWLHAGLPYHVGATTIDCQCGSAQQANHLVAGLIAAGAIDVGIACGVEAMSRVPLGANAGPGRGLPRPDSWDIDMP  145 (387)
T ss_pred             HHHHHHHhCCCCCCCceEEEecccccHHHHHHHHHHHHHCCCCCEEEEEeEecCCCCcccccccccccCccccccccCcc
Confidence            355667778996  4999999999 9999999999999999999999999999865321000              0   


Q ss_pred             --------------------------Hhhcc--------ccccC---------CC-CCCCC-------------------
Q psy5293          84 --------------------------CRVRA--------LATQF---------NN-EPAQA-------------------  100 (359)
Q Consensus        84 --------------------------~~~~~--------l~~~~---------~~-~~~~~-------------------  100 (359)
                                                +...+        +.+.-         .. +|.+.                   
T Consensus       146 ~m~~~ae~~~~~ygisre~~d~~a~~sh~~a~~A~~~g~f~~ei~pv~~~~~~~~~np~~~~~~~~~D~~~r~~t~e~l~  225 (387)
T PRK07850        146 NQFEAAERIAKRRGITREDVDAFGLRSQRRAAQAWAEGRFDREISPVQAPVLDEEGQPTGETRLVTRDQGLRDTTMEGLA  225 (387)
T ss_pred             hHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeEeecccccccccCCCceEeecCCCcccCCHHHhc
Confidence                                      00000        00000         00 11111                   


Q ss_pred             --CCCccC----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293         101 --SRPFDK----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus       101 --~~~fd~----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                        ...|..    ..+...++||++++++.+.+.+.+.+.++.++|.+++                               
T Consensus       226 ~l~p~~~~~~~t~~~~~~~sDGAaa~vl~see~A~~l~~~p~~~i~g~~-------------------------------  274 (387)
T PRK07850        226 GLKPVLEGGIHTAGTSSQISDGAAAVLWMDEDRARALGLRPRARIVAQA-------------------------------  274 (387)
T ss_pred             cCCCCCCCCCccchhcCCcCCceEEEEEecHHHHHHcCCCCcEEEEEEE-------------------------------
Confidence              112211    0122347899999999999999888877778888875                               


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCc
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPL  254 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~  254 (359)
                                                      ...     ..|.....+...+++++|+++|++|+|||++|.|+.++. 
T Consensus       275 --------------------------------~~~-----~~~~~~~~~~~~a~~~al~~agl~~~did~~ei~d~F~~-  316 (387)
T PRK07850        275 --------------------------------LVG-----AEPYYHLDGPVQATAKVLEKAGMKIGDIDLVEINEAFAS-  316 (387)
T ss_pred             --------------------------------Eec-----cCchhhcchHHHHHHHHHHHcCCCHHHcCeeeecccchH-
Confidence                                            100     011112245678999999999999999999999999884 


Q ss_pred             ccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCC
Q psy5293         255 GDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDG  334 (359)
Q Consensus       255 ~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (359)
                      .....++.++..  ..++++.+....+|||.+|+|+.+++++++||+                       .+       +
T Consensus       317 ~~l~~~e~lg~~--~~pvN~~GG~la~Ghp~gatG~~~v~e~~~qL~-----------------------~~-------~  364 (387)
T PRK07850        317 VVLSWAQVHEPD--MDKVNVNGGAIALGHPVGSTGARLITTALHELE-----------------------RT-------D  364 (387)
T ss_pred             HHHHHHHHcCCC--CCCcCCCCchhhcCCCcchhHHHHHHHHHHHHH-----------------------hc-------C
Confidence            233334443322  247777777777899999999999999999998                       11       2


Q ss_pred             ccEEEEeCcCcCcceeeEEEeec
Q psy5293         335 RRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       335 ~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      .++++++..+-||...++|||++
T Consensus       365 ~~~g~~~~c~~gg~g~a~~~e~~  387 (387)
T PRK07850        365 KSTALITMCAGGALSTGTIIERI  387 (387)
T ss_pred             CCeEEEEEccccCceeEEEEEeC
Confidence            57899998888999999999974

>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism

Probab=99.85  E-value=2.4e-20  Score=179.84  Aligned_cols=239  Identities=23%  Similarity=0.249  Sum_probs=166.8

Q ss_pred             HHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH---------HH---hhccc
Q psy5293          24 PAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA---------FC---RVRAL   89 (359)
Q Consensus        24 ~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~---------~~---~~~~l   89 (359)
                      ++.+++..+|+. .|.++|+.+| |++.+|..|+++|++|++|++||+|+|.+........         +.   ..+.+
T Consensus        55 ~a~~va~~lGl~~~~~~~v~~~c~sg~~al~~Aa~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  134 (375)
T cd00829          55 PGALIAEYLGLLGKPATRVEAAGASGSAAVRAAAAAIASGLADVVLVVGAEKMSDVPTGDEAGGRASDLEWEGPEPPGGL  134 (375)
T ss_pred             hHHHHHHHcCCCCcceeeEeCccHHHHHHHHHHHHHHHhCCCCEEEEEEEeecccCcccchhhccccchhhhhcccccCC
Confidence            688899999995 5999999999 9999999999999999999999999998654311000         00   00000


Q ss_pred             cc-------------------------------cCCCCCCCCC----------------CCccCCCCCceecceeeEEee
Q psy5293          90 AT-------------------------------QFNNEPAQAS----------------RPFDKRRDGFVMGEGSAILVL  122 (359)
Q Consensus        90 ~~-------------------------------~~~~~~~~~~----------------~~fd~~~~G~~~geGa~a~~l  122 (359)
                      ..                               +...+|....                .|+. ..+...++||+++++|
T Consensus       135 ~~~~~~al~a~~~~~~~g~t~e~~~~va~~~~~~A~~np~A~~~~~~t~d~~~~~~~i~~pl~-~~~~~~~~DGaaa~vl  213 (375)
T cd00829         135 TPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIADPLR-LLDCCPVSDGAAAVVL  213 (375)
T ss_pred             ChHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCc-hhhcCCCCCceeEEEE
Confidence            00                               0000111100                1111 1133458999999999


Q ss_pred             cchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCc
Q psy5293         123 EELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGA  202 (359)
Q Consensus       123 ~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~  202 (359)
                      .+.+.+.+. .+++++|.+++                                                           
T Consensus       214 ~s~~~a~~~-~~~~~~i~g~~-----------------------------------------------------------  233 (375)
T cd00829         214 ASEERAREL-TDRPVWILGVG-----------------------------------------------------------  233 (375)
T ss_pred             ecHHHHhhc-CCCCeEEEEEE-----------------------------------------------------------
Confidence            999998876 55668888876                                                           


Q ss_pred             ccccccCCCccCCCCC--cChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC------------
Q psy5293         203 HAIGMSGDGHHLTSPR--EDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP------------  268 (359)
Q Consensus       203 ~aig~~~~~~~~~~p~--~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~------------  268 (359)
                          ...+........  ....+...+++++|+++|++++|||++|+|++++. .....+++|+.+..            
T Consensus       234 ----~~~~~~~~~~~~~~~~~~~~~~a~~~al~~Agl~~~did~~ei~d~F~~-~~l~~~e~lGl~~~g~~~~~~~~g~~  308 (375)
T cd00829         234 ----AASDTPSLSERDDFLSLDAARLAARRAYKMAGITPDDIDVAELYDCFTI-AELLALEDLGFCEKGEGGKLVREGDT  308 (375)
T ss_pred             ----EecCCccccccccccccHHHHHHHHHHHHHcCCCHHHCCEEEecCcChH-HHHHHHHHcCCCCCCchHHHHHCCCc
Confidence                211122211111  13467789999999999999999999999999995 45667777765442            


Q ss_pred             --CCCceeccccc--ccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcC
Q psy5293         269 --AQRLMVSSTKG--AHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFG  344 (359)
Q Consensus       269 --~~~~~v~~~k~--~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  344 (359)
                        .+++||+...+  ..|||.+++|+.+++++++||+                       +++.++|+++.+++++++.|
T Consensus       309 ~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qlr-----------------------g~ag~~qv~~~~~~l~~~~g  365 (375)
T cd00829         309 AIGGDLPVNTSGGLLSKGHPLGATGLAQAVEAVRQLR-----------------------GEAGARQVPGARVGLAHNIG  365 (375)
T ss_pred             cCCCCccccCCCchhcCCCCccHHHHHHHHHHHHHhc-----------------------CCcccccCCCccEEEEecCC
Confidence              22345554444  4599999999999999999999                       66677788789999999987


Q ss_pred             cCcceee
Q psy5293         345 FGGTNAC  351 (359)
Q Consensus       345 ~gG~~~~  351 (359)
                      ..+++..
T Consensus       366 g~~~~~~  372 (375)
T cd00829         366 GTGSAAV  372 (375)
T ss_pred             CccceEE
Confidence            5554443

The N-terminal presequence in the SCP-x isoform represents a peroxisomal 3-ketacyl-Coa thiolase specific for branched-chain acyl CoAs, which is proteolytically cleaved from the sterol carrier protein.

>PRK06059 lipid-transfer protein; Provisional

Probab=99.85  E-value=2e-20  Score=181.52  Aligned_cols=257  Identities=16%  Similarity=0.169  Sum_probs=167.5

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHH--HHH-------HHHh---hccc
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQL--SIA-------AFCR---VRAL   89 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~--~~~-------~~~~---~~~l   89 (359)
                      .+..++..+|+++ |.++|+++| |++.||..|+++|++|++|.+||+|+|.+....  ...       .+..   .+..
T Consensus        63 ~a~~va~~lG~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~g~~  142 (399)
T PRK06059         63 AGATFAQALGWNGAPVSSSYAACASGSQALQSARAQILAGLCDVALVVGADTTPKGFFAPVGGERPDDPDWLRFHLIGAT  142 (399)
T ss_pred             HHHHHHHHhCCCCCceecccchhHHHHHHHHHHHHHHHCCCCCEEEEEEEcccCCCCCcccccccccccchhhcccCCCc
Confidence            5678999999987 899999999 999999999999999999999999999865310  000       0000   0000


Q ss_pred             --------cc----------------------cCCCCCCCCC-CCcc------------CC--CCCceecceeeEEeecc
Q psy5293          90 --------AT----------------------QFNNEPAQAS-RPFD------------KR--RDGFVMGEGSAILVLEE  124 (359)
Q Consensus        90 --------~~----------------------~~~~~~~~~~-~~fd------------~~--~~G~~~geGa~a~~l~~  124 (359)
                              ..                      +...+|+... ++.+            +-  -+-..+.||+++++|.+
T Consensus       143 ~~~~~al~a~~~~~~yg~s~e~~a~v~~~~~~~a~~Np~A~~r~~~t~e~v~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s  222 (399)
T PRK06059        143 NPVYFALLARRRMDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDGAAALIVAS  222 (399)
T ss_pred             cHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEec
Confidence                    00                      0001222111 1111            10  12233689999999999


Q ss_pred             hHHHHhc--CCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCc
Q psy5293         125 LDHALAR--SANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGA  202 (359)
Q Consensus       125 ~~~a~~~--g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~  202 (359)
                      .+.+.+.  +.+...+|++++........                .                                  
T Consensus       223 ~~~A~~l~~~~~~~v~I~g~~~~~~~~~~----------------~----------------------------------  252 (399)
T PRK06059        223 KSFARRHLGSVAGVPSVRAISTVTPRYPQ----------------H----------------------------------  252 (399)
T ss_pred             HHHHHhhccccCCceEEEEEEEecccccc----------------c----------------------------------
Confidence            9888766  43344677776511000000                0                                  


Q ss_pred             ccccccCC-CccC--CCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC-----------
Q psy5293         203 HAIGMSGD-GHHL--TSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP-----------  268 (359)
Q Consensus       203 ~aig~~~~-~~~~--~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~-----------  268 (359)
                        +....+ ....  ..|.+.......+++++++++|++++|||++|+|++++. .....+++|+.+..           
T Consensus       253 --~~~~~~~~~~~~~~~~a~~~~~~~~a~~~a~~~agl~~~Did~~El~d~f~~-~~l~~~e~lGl~~~G~~~~~~~~G~  329 (399)
T PRK06059        253 --LPELPDIATDSTAAVPAPERVFKDQILDAAYAEAGIGPEDLSLAEVYDLSTA-LELDWYEHLGLCPKGEAEALLRSGA  329 (399)
T ss_pred             --ccccccccccccccccccccHHHHHHHHHHHHHcCCCHHHCcEEeecccChH-HHHHHHHHcCCCCCCcHHHHHHCCC
Confidence              000000 0000  011111122356789999999999999999999999885 34555666654321           


Q ss_pred             ---CCCceecccccc--cchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCc
Q psy5293         269 ---AQRLMVSSTKGA--HGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSF  343 (359)
Q Consensus       269 ---~~~~~v~~~k~~--~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (359)
                         ++++||+...+.  .|||.||+|+.+++++++||+                       +++..+|+++.+++++++.
T Consensus       330 ~~~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~qLr-----------------------g~ag~~Qv~~a~~gl~~~~  386 (399)
T PRK06059        330 TTLGGRIPVNPSGGLACFGEAIPAQAIAQVCELTWQLR-----------------------GQAGGRQVEGARVGITANQ  386 (399)
T ss_pred             ccCCCCeeecCCCccccCCccCCccHHHHHHHHHHHhc-----------------------cCcCCccCCCccEEEEecc
Confidence               334566555544  499999999999999999999                       6677788888999999988


Q ss_pred             CcCcceeeEEEee
Q psy5293         344 GFGGTNACLCIAE  356 (359)
Q Consensus       344 g~gG~~~~~il~~  356 (359)
                      |.+|..+++||++
T Consensus       387 g~~g~~~~~~l~~  399 (399)
T PRK06059        387 GLFGHGSSVIVAR  399 (399)
T ss_pred             CCcccceEEEecC
Confidence            8889999999985

>PRK07851 acetyl-CoA acetyltransferase; Provisional

Probab=99.85  E-value=1.8e-20  Score=181.54  Aligned_cols=234  Identities=21%  Similarity=0.283  Sum_probs=168.8

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH-------------HH-------
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS-------------IA-------   81 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~-------------~~-------   81 (359)
                      ++..++..+|+++ |.++|+++| ||+.|+..|+++|++|.+|++||+|+|++.....             +.       
T Consensus        68 ~~~~~a~~lGl~~~p~~~v~~~caSG~~av~~Aa~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~  147 (406)
T PRK07851         68 MARVVAVLLGYDFLPGTTVNRYCSSSLQTTRMAFHAIKAGEGDVFISAGVETVSRFAKGNSDSLPDTKNPLFAEAQARTA  147 (406)
T ss_pred             HHHHHHHHcCCCCCCeeeeeccchhHHHHHHHHHHHHHCCCCCEEEEeeEEecccCcccccccccccCchhhhhcccccc
Confidence            4678999999976 999999999 9999999999999999999999999997532210             00       


Q ss_pred             --------HHHh-hc----------c------------cc--------------------ccCCC---C----CCC----
Q psy5293          82 --------AFCR-VR----------A------------LA--------------------TQFNN---E----PAQ----   99 (359)
Q Consensus        82 --------~~~~-~~----------~------------l~--------------------~~~~~---~----~~~----   99 (359)
                              .+.. .+          +            ++                    +..+.   .    |+.    
T Consensus       148 ~~~~~~~~~~~~~~g~~~~~~~~~amg~~a~~~~~~yg~~re~~~~~a~~s~~~a~~A~~n~~~a~~~~p~~~p~~~~~~  227 (406)
T PRK07851        148 ARAEGGAEAWHDPREDGLLPDVYIAMGQTAENVAQLTGISREEQDEWGVRSQNRAEEAIANGFFEREITPVTLPDGTVVS  227 (406)
T ss_pred             cccccccccccccccccccccccccHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCccceeeeecCCCceeC
Confidence                    0000 00          0            00                    00000   0    000    


Q ss_pred             ---CC------------CC-ccC-----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhc
Q psy5293         100 ---AS------------RP-FDK-----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQ  158 (359)
Q Consensus       100 ---~~------------~~-fd~-----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~  158 (359)
                         ..            ++ |++     ..+...++||++++++.+.+.+.+.+.+++++|.|++               
T Consensus       228 ~d~~~r~~~t~e~v~~s~~v~~P~~~lt~~d~~~~~DGaaa~vl~s~e~A~~~~~~~~a~I~g~~---------------  292 (406)
T PRK07851        228 TDDGPRAGTTYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELGLTPLARIVSTG---------------  292 (406)
T ss_pred             CCCCccCCcCHHHHhcCCCccCCCCcEecCcCCccCCceeEEEEccHHHHHHcCCCccEEEEEEE---------------
Confidence               00            01 111     0022236899999999999999988989888999876               


Q ss_pred             ccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCC
Q psy5293         159 GSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLS  238 (359)
Q Consensus       159 ~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~  238 (359)
                                                                      ....     .|++...+...+++++|++++++
T Consensus       293 ------------------------------------------------~~~~-----~~~~~~~~~~~a~~~al~~Agi~  319 (406)
T PRK07851        293 ------------------------------------------------VSGL-----SPEIMGLGPVEASKQALARAGMS  319 (406)
T ss_pred             ------------------------------------------------EccC-----CCCccchhHHHHHHHHHHHhCCC
Confidence                                                            1110     12223345678999999999999


Q ss_pred             CCCccEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccC
Q psy5293         239 PGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEA  318 (359)
Q Consensus       239 ~~dI~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~  318 (359)
                      |+|||++|.|+.++. .+...+++|+.+  ..++++++.+..+|||.|++|+.+++++++||++                
T Consensus       320 ~~did~~ei~d~f~~-~~l~~le~lg~~--~~pvN~~GG~l~~Ghp~gasg~~~~~~~~~qL~~----------------  380 (406)
T PRK07851        320 IDDIDLVEINEAFAA-QVLPSARELGID--EDKLNVSGGAIALGHPFGMTGARITTTLLNNLQT----------------  380 (406)
T ss_pred             HHHCCeehhhhHHHH-HHHHHHHHhCCC--ccccCCCCChHhhcCcHHHHHHHHHHHHHHHHHh----------------
Confidence            999999998888774 334555555543  3478889999999999999999999999999981                


Q ss_pred             CCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         319 GGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                                    .+.++++++..+.||+..++|||++.
T Consensus       381 --------------~~~~~g~~~~~~~gg~g~a~~~e~~~  406 (406)
T PRK07851        381 --------------HDKTFGLETMCVGGGQGMAMVLERLS  406 (406)
T ss_pred             --------------cCCCeEEEEEccccChhhEEEEEecC
Confidence                          12578999999999999999999863

>PRK06954 acetyl-CoA acetyltransferase; Provisional

Probab=99.85  E-value=2.7e-20  Score=179.98  Aligned_cols=232  Identities=18%  Similarity=0.211  Sum_probs=160.6

Q ss_pred             HHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH---------------HH-H--
Q psy5293          25 AGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI---------------AA-F--   83 (359)
Q Consensus        25 a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~---------------~~-~--   83 (359)
                      +.+.+..+|+.  .|+++|+++| ||+.|+..|+++|++|++|++||+|+|++......               .. +  
T Consensus        71 ~~~~~l~ag~~~~~p~~~V~~aCaSG~~Av~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~r~~~~~~~~~~~~~~~~  150 (397)
T PRK06954         71 ARQAALGAGLPLSVGCTTVNKMCGSGMRAAMFAHDMLVAGSVDVIVAGGMESMTNAPYLLPKARGGMRMGHGQVLDHMFL  150 (397)
T ss_pred             HHHHHHcCCCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEeeeccCCCcccCcccccccccCcchhhhhhcc
Confidence            34444555653  5889999999 99999999999999999999999999997632100               00 0  


Q ss_pred             Hhh-cccc---------c----cC-------------------CCCCCCCC----CCcc---------------------
Q psy5293          84 CRV-RALA---------T----QF-------------------NNEPAQAS----RPFD---------------------  105 (359)
Q Consensus        84 ~~~-~~l~---------~----~~-------------------~~~~~~~~----~~fd---------------------  105 (359)
                      ... ..+.         .    .+                   +.+|.+..    .|++                     
T Consensus       151 ~~~~~~~~~~~~~~~~a~~~~~~ygitre~~d~~A~~s~~~a~~a~~~~~~~~~~~pv~v~~~~~~~~v~~D~~pr~~~~  230 (397)
T PRK06954        151 DGLEDAYDKGRLMGTFAEECAGEYGFTREAQDAFAIESLARAKRANEDGSFAWEIAPVTVAGKKGDTVIDRDEQPFKANP  230 (397)
T ss_pred             cccccccccCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeEEeccCCCCeEeccCCCcCCCCH
Confidence            000 0000         0    00                   00011110    0111                     


Q ss_pred             -----------CC-----CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchh
Q psy5293         106 -----------KR-----RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFV  169 (359)
Q Consensus       106 -----------~~-----~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~  169 (359)
                                 +.     .+...++||+++++|++.+.+.+.+.+++++|++.+                          
T Consensus       231 ~~l~~l~~~f~~~g~lt~~~~~~~~DGAaa~vl~s~~~a~~~~~~p~~~i~g~~--------------------------  284 (397)
T PRK06954        231 EKIPTLKPAFSKTGTVTAANSSSISDGAAALVMMRASTAKRLGLAPLARVVGHS--------------------------  284 (397)
T ss_pred             HHHhCCCCccCCCCcEEccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEE--------------------------
Confidence                       00     011236899999999999999998988888887764                          


Q ss_pred             hcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q psy5293         170 TRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHA  249 (359)
Q Consensus       170 ~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~  249 (359)
                                                           ...     ..|.....+...+++++|+++|++|+|||++|.|+
T Consensus       285 -------------------------------------~~~-----~~~~~~~~~~~~a~~~al~~agl~~~Did~~ei~d  322 (397)
T PRK06954        285 -------------------------------------TFA-----QAPSKFTTAPVGAIRKLFEKNGWRAAEVDLFEINE  322 (397)
T ss_pred             -------------------------------------ecc-----cCcccccchHHHHHHHHHHHcCCCHHHCCEEehhh
Confidence                                                 100     11111223567899999999999999999999998


Q ss_pred             CCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccc
Q psy5293         250 TSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTE  329 (359)
Q Consensus       250 ~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~  329 (359)
                      .++. .+...++.|+.  ...++++++.+..+|||+||||+++++++++||+                       ++.  
T Consensus       323 ~fa~-~~l~~~e~lg~--~~~~vN~~GG~~a~Ghp~gasG~~~~~~~~~qL~-----------------------~~~--  374 (397)
T PRK06954        323 AFAV-VTMAAMKEHGL--PHEKVNVNGGACALGHPIGASGARILVTLIGALR-----------------------ARG--  374 (397)
T ss_pred             HHHH-HHHHHHHHhCC--CcccCCcCCChHHhcccHHHHHHHHHHHHHHHHH-----------------------hcC--
Confidence            8874 33334444432  2457889999999999999999999999999998                       322  


Q ss_pred             cccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         330 WKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       330 ~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                           .++.+++...-||...++|||+.
T Consensus       375 -----g~~~v~~~c~~gg~g~a~~~e~~  397 (397)
T PRK06954        375 -----GKRGVASLCIGGGEATAMGIELI  397 (397)
T ss_pred             -----CCeEEEEEccccchhhEEEEEeC
Confidence                 36778888888999999999974

>PRK05790 putative acyltransferase; Provisional

Probab=99.85  E-value=3.7e-20  Score=179.36  Aligned_cols=233  Identities=23%  Similarity=0.309  Sum_probs=164.3

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH----H---------HHHh--
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI----A---------AFCR--   85 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~----~---------~~~~--   85 (359)
                      ++..+...+|+.  .|.++|+++| |++.||..|+++|++|++|++||+|+|++......    .         ....  
T Consensus        65 ~~~~~~~~~gl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~  144 (393)
T PRK05790         65 PARQAALKAGLPVEVPALTINKVCGSGLKAVALAAQAIRAGDADIVVAGGQESMSQAPHVLPGSRWGQKMGDVELVDTMI  144 (393)
T ss_pred             HHHHHHHHcCCCCCCceeeecccchHHHHHHHHHHHHHHcCCCCEEEEEeeeccccCcccccccccccccCcchhhhhhc
Confidence            455566677885  4999999999 99999999999999999999999999986322100    0         0000  


Q ss_pred             ------------hccccccC-----------------------C--CC--------C---------------CCC-----
Q psy5293          86 ------------VRALATQF-----------------------N--NE--------P---------------AQA-----  100 (359)
Q Consensus        86 ------------~~~l~~~~-----------------------~--~~--------~---------------~~~-----  100 (359)
                                  ++..+..+                       .  .+        |               +..     
T Consensus       145 ~~~~~~~~~~~~~a~~a~~y~~~yG~tre~la~vav~~~~~A~~~~~~g~~~~~i~P~~~~~~~~~~~~~~~d~~~~~~~  224 (393)
T PRK05790        145 HDGLTDAFNGYHMGITAENLAEQYGITREEQDEFALASQQKAEAAIKAGRFKDEIVPVTIKQRKGDPVVVDTDEHPRPDT  224 (393)
T ss_pred             ccccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeeEEecCCCCCceEecCCCCCCCCC
Confidence                        00000000                       0  00        0               000     


Q ss_pred             -------CC-CccCC-----CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293         101 -------SR-PFDKR-----RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus       101 -------~~-~fd~~-----~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                             .+ .|++.     .+...++||+++++|.+.+.+.+.+.+++++|.+++                        
T Consensus       225 ~~e~l~~~~~v~~~~g~lt~~d~~~~~DGAaavvl~s~e~a~~~~~~~~~~I~g~~------------------------  280 (393)
T PRK05790        225 TAESLAKLRPAFDKDGTVTAGNASGINDGAAAVVVMSEAKAKELGLTPLARIVSYA------------------------  280 (393)
T ss_pred             CHHHHhCCCCccCCCCCEeCCcCCCCCCceEEEEEecHHHHHHCCCCeeEEEEEEE------------------------
Confidence                   00 01110     023357899999999999999888888888999886                        


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA  247 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~  247 (359)
                                                             ...     ..|.....+...+++++|+++|++|+|||++|.
T Consensus       281 ---------------------------------------~~~-----~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~  316 (393)
T PRK05790        281 ---------------------------------------VAG-----VDPAIMGIGPVPAIRKALEKAGWSLADLDLIEI  316 (393)
T ss_pred             ---------------------------------------Ecc-----CCCCccchhHHHHHHHHHHHcCCCHHHCCEEEe
Confidence                                                   111     112222345678999999999999999999999


Q ss_pred             ccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc
Q psy5293         248 HATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAV  327 (359)
Q Consensus       248 h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~  327 (359)
                      |+.++. .....++.++.+  ..++++++.+..+|||.||||+++++++++||+                       ++ 
T Consensus       317 ~d~f~~-~~l~~~e~lg~~--~~pvN~~GG~l~~Ghp~gatG~~~~~e~~~qL~-----------------------~~-  369 (393)
T PRK05790        317 NEAFAA-QALAVEKELGLD--PEKVNVNGGAIALGHPIGASGARILVTLLHEMK-----------------------RR-  369 (393)
T ss_pred             CcHHHH-HHHHHHHHhCCC--hhhcCCCcchhhhCcchhhhHHHHHHHHHHHHH-----------------------hc-
Confidence            887763 223344444332  357888899998999999999999999999998                       21 


Q ss_pred             cccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         328 TEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                            +.|+++++..+-+|..+++|||+.
T Consensus       370 ------~~~~gl~~~~~~~g~g~~~~~e~~  393 (393)
T PRK05790        370 ------GAKKGLATLCIGGGQGVALIVERP  393 (393)
T ss_pred             ------CCCeEEEEEeccCCceeEEEEEcC
Confidence                  258999999999999999999973

>PLN02644 acetyl-CoA C-acetyltransferase

Probab=99.85  E-value=3.9e-20  Score=178.79  Aligned_cols=234  Identities=21%  Similarity=0.251  Sum_probs=163.8

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH---------------H-----
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS---------------I-----   80 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~---------------~-----   80 (359)
                      ++..++..+|+.  -|.++|+++| ||+.||..|+++|++|++|++||+|+|++.....               .     
T Consensus        64 ~~~~~~~~~Gl~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vlv~G~E~~s~~~~~~~~~~~~~~~~~~~~~~~~~  143 (394)
T PLN02644         64 PARQAALGAGLPPSTICTTVNKVCASGMKAVMLAAQSIQLGINDVVVAGGMESMSNAPKYLPEARKGSRLGHDTVVDGML  143 (394)
T ss_pred             HHHHHHHhcCCCCCCceEEEeccchHHHHHHHHHHHHHHcCCCCEEEEEeEEecCCCcccccccccccccccchhhhhcc
Confidence            455688889996  3899999999 9999999999999999999999999998742110               0     


Q ss_pred             ------------HH------HHhhccc----------c--c-cCCCCCCCC-------------CCC---c---------
Q psy5293          81 ------------AA------FCRVRAL----------A--T-QFNNEPAQA-------------SRP---F---------  104 (359)
Q Consensus        81 ------------~~------~~~~~~l----------~--~-~~~~~~~~~-------------~~~---f---------  104 (359)
                                  ..      ....|..          +  + ..+.+|...             ..|   +         
T Consensus       144 ~~~~~~~~~~~~~~~~A~~~~~~yG~tre~la~vav~s~~~a~~a~~~~~~~~ei~~~~v~~~~~~~~~~~~~de~~~~~  223 (394)
T PLN02644        144 KDGLWDVYNDFGMGVCAELCADQYSISREEQDAYAIQSYERAIAAQEAGAFAWEIVPVEVPGGRGRPSVIVDKDEGLGKF  223 (394)
T ss_pred             ccccccccCCCcHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCCccceeeEEeccCCCCCceEeecCCCcCCC
Confidence                        00      0000000          0  0 000011000             000   0         


Q ss_pred             cC------------C------CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293         105 DK------------R------RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus       105 d~------------~------~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.            +      .+...++||+++++|++.+.+.+.+.+++++|+|++                       
T Consensus       224 ~~~~l~~l~p~f~~~~g~vt~~~~~~~~DGaaavvl~s~~~A~~~~~~~~a~I~g~~-----------------------  280 (394)
T PLN02644        224 DPAKLRKLRPSFKEDGGSVTAGNASSISDGAAALVLVSGEKALELGLQVIAKIRGYA-----------------------  280 (394)
T ss_pred             CHHHHhCCCCcccCCCCcEeccccCCCCcceEEEEeccHHHHHHCCCCeEEEEEEEE-----------------------
Confidence            00            0      123346899999999999999988999989999886                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...+.     +.........+++++|+++|++|+|||++|
T Consensus       281 ----------------------------------------~~~~~-----~~~~~~~~~~a~~~al~~Agi~~~Did~~E  315 (394)
T PLN02644        281 ----------------------------------------DAAQA-----PELFTTAPALAIPKALKHAGLEASQVDYYE  315 (394)
T ss_pred             ----------------------------------------EcCCC-----CcccchhHHHHHHHHHHHcCCCHHHCCEEE
Confidence                                                    11111     111113445799999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTA  326 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~  326 (359)
                      +|+.++. .....++.++.+  ..++++++.+..+|||.||||+++++++++||+                       ++
T Consensus       316 i~d~f~~-~~l~~~e~lg~~--~~~vN~~GG~l~~Ghp~gasG~~~~~~~~~~l~-----------------------~~  369 (394)
T PLN02644        316 INEAFSV-VALANQKLLGLD--PEKVNVHGGAVSLGHPIGCSGARILVTLLGVLR-----------------------SK  369 (394)
T ss_pred             eCcHHHH-HHHHHHHHhCCC--ccccCCCCChHhhCCCHHHHHHHHHHHHHHHHH-----------------------hc
Confidence            8887763 334444444432  357888888888999999999999999999998                       21


Q ss_pred             ccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         327 VTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                             +.|+++.+..+-||...++|||+.+
T Consensus       370 -------~~~~g~~~~~~~gg~g~a~~~e~~~  394 (394)
T PLN02644        370 -------NGKYGVAGICNGGGGASAIVVELMQ  394 (394)
T ss_pred             -------CCCeEEEEEeccCCceeEEEEEecC
Confidence                   2578888888888999999999864

>PRK06065 acetyl-CoA acetyltransferase; Provisional

Probab=99.85  E-value=1e-19  Score=175.15  Aligned_cols=245  Identities=15%  Similarity=0.095  Sum_probs=162.8

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH----H-----------------
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS----I-----------------   80 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~----~-----------------   80 (359)
                      .+..++..+|+.+ |.+.|+++| ||..+|..|+++|++|.+|++||+|+|++.....    .                 
T Consensus        69 ~a~~l~~~lG~~~~~~~~V~~~gasG~~al~~A~~~I~sG~ad~vLVvg~e~~~~~~~~~~~~~~~~~~~~~~~p~g~~~  148 (392)
T PRK06065         69 KGEYLSHGSGGIRKPVSRVYVGGATGVMTAIAGWYHVASGLCQKVLAVAEEKMSPARPHPQAVFRYIWDPILEKPLNPNL  148 (392)
T ss_pred             HHHHHHHHcCCCCCCeEEEecCchhHHHHHHHHHHHHhCCCCCEEEEEEeecccccccchhHHHhhhccchhccCCCccH
Confidence            4667889999875 999999999 9999999999999999999999999998532100    0                 


Q ss_pred             ---HHHHhhccccc-----------------cCCCCCCCCC-CCccCC--------------CCCceecceeeEEeecch
Q psy5293          81 ---AAFCRVRALAT-----------------QFNNEPAQAS-RPFDKR--------------RDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        81 ---~~~~~~~~l~~-----------------~~~~~~~~~~-~~fd~~--------------~~G~~~geGa~a~~l~~~  125 (359)
                         +.+...+.+..                 +...+|.... +|.+.+              -+...+.||+++++|.+.
T Consensus       149 ~~~~Al~a~rym~~yG~~~e~lA~vav~~~~~A~~NP~A~~r~~lt~e~vl~s~~ia~Pl~l~d~~~~~DGAaA~vl~s~  228 (392)
T PRK06065        149 IWIFAMEMHRYMATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSDGAAAIVLASE  228 (392)
T ss_pred             HHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHhhccCchhhhcCCCCHHHHhcCCcccCCCchhhcCCCCCceEEEEEeCH
Confidence               00000000000                 0001222111 111100              122347899999999999


Q ss_pred             HHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccc
Q psy5293         126 DHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAI  205 (359)
Q Consensus       126 ~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~ai  205 (359)
                      +.+.+.++++ ..|.+++...                                                      +...+
T Consensus       229 e~A~~l~~~~-v~I~g~~~~~------------------------------------------------------~~~~~  253 (392)
T PRK06065        229 DLARRYTDTP-VWVEGVGWTL------------------------------------------------------DNTEW  253 (392)
T ss_pred             HHHHhcCCCC-EEEEEEEEec------------------------------------------------------Ccccc
Confidence            9888766665 3466665100                                                      00000


Q ss_pred             cccCCCccCCCCCcChHHHHHHHHHHHHHcCCCC--CCccEEEeccCCCCcccHHHHHHHHhhcC--------------C
Q psy5293         206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSP--GDISYINAHATSTPLGDVIELKAIGSLFP--------------A  269 (359)
Q Consensus       206 g~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~--~dI~~ie~h~~~t~~~d~~E~~al~~~~~--------------~  269 (359)
                       .   .....    .......+++++++++|+++  +|||++|+|++++. .+...+++++.+..              .
T Consensus       254 -~---~~~~~----~~~~~~~a~~~a~~~aGi~~p~~diD~~ei~D~Fs~-~~l~~~E~lG~~~~G~~~~~~~~g~~~~~  324 (392)
T PRK06065        254 -P---NRDLA----YPRYVEFAARMAYKMAGIERPRKEIDVAEPYDPFDY-KELHHLEGLQLAKRGEAPKLLKEGVFDID  324 (392)
T ss_pred             -c---ccccc----ccHHHHHHHHHHHHHcCCCCchhhCcEEEecCCChH-HHHHHHHHcCCCCCCcHHHHHHCCCccCC
Confidence             0   00011    11345679999999999985  99999999999985 45667777754332              4


Q ss_pred             CCceeccccccc--chHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCc-cEEEEeCcC-c
Q psy5293         270 QRLMVSSTKGAH--GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGR-RVALKNSFG-F  345 (359)
Q Consensus       270 ~~~~v~~~k~~~--Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~g-~  345 (359)
                      +++||+...+.+  |||.+|+|+.+++++++||+                       +++.++|+++. ++++++++| .
T Consensus       325 G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLr-----------------------g~ag~rQv~~a~~~~l~~~~Gg~  381 (392)
T PRK06065        325 GDIPSSPSGGLLGVGNPIAAAGLMKVISIYWQLK-----------------------GTAGKMQVKKPVHTGVAQAWGDL  381 (392)
T ss_pred             CCeeecCCCccccCCCCccHHHHHHHHHHHHHHh-----------------------ccccCCcCCCccceeEEeccccc
Confidence            456776555544  99999999999999999999                       77888898888 899999987 4


Q ss_pred             CcceeeEEEe
Q psy5293         346 GGTNACLCIA  355 (359)
Q Consensus       346 gG~~~~~il~  355 (359)
                      +..++.+||+
T Consensus       382 ~~~~~~~il~  391 (392)
T PRK06065        382 MQAGTVIVLR  391 (392)
T ss_pred             cceeEEEEec
Confidence            4455555553

>PRK06445 acetyl-CoA acetyltransferase; Provisional

Probab=99.84  E-value=4.8e-20  Score=178.31  Aligned_cols=224  Identities=19%  Similarity=0.243  Sum_probs=162.2

Q ss_pred             cCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH-----------HH-H-----HH-h----hcc
Q psy5293          32 MDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS-----------IA-A-----FC-R----VRA   88 (359)
Q Consensus        32 ~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~-----------~~-~-----~~-~----~~~   88 (359)
                      ++.+.|+++|+++| ||+.|+..|+++|++|.+|++||+|+|++.....           .. .     +. .    ++.
T Consensus        82 ~~~~~p~~~V~~~CaSg~~ai~~A~~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~  161 (394)
T PRK06445         82 LPYNIPAMAVDRQCASSLTTVSIGAMEIATGMADIVIAGGVEHMTRTPMGDNPHIEPNPKLLTDPKYIEYDLTTGYVMGL  161 (394)
T ss_pred             CCCCCcchhhhhhhHHHHHHHHHHHHHHHcCCCCEEEEeeecccccCccccCccccCChhhccccccCcccccCCCCHHH
Confidence            34346999999999 9999999999999999999999999997652110           00 0     00 0    000


Q ss_pred             cccc----C-------------------C------------------------CCCCCCCC-------------CccC--
Q psy5293          89 LATQ----F-------------------N------------------------NEPAQASR-------------PFDK--  106 (359)
Q Consensus        89 l~~~----~-------------------~------------------------~~~~~~~~-------------~fd~--  106 (359)
                      .+..    +                   .                        .+|+...+             .|++  
T Consensus       162 ~a~~~~~~ygitre~~a~va~~sh~~A~~a~~~g~~~~ei~p~~~~~~~~~~~~npda~~r~~~t~e~~~~~~~v~~~~g  241 (394)
T PRK06445        162 TAEKLAEEAGIKREEMDRWSLRSHQLAAKAIQEGYFKDEILPIEVEVEGKKKVVDVDQSVRPDTSLEKLAKLPPAFKPDG  241 (394)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceEeEEEecCCCCceeeCCCCCCCCCCCHHHHhcCCCccCCCC
Confidence            0000    0                   0                        01221111             1111  


Q ss_pred             ---CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHH
Q psy5293         107 ---RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISI  183 (359)
Q Consensus       107 ---~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~  183 (359)
                         ..+...++||+++++|++.+.+.+.+.+++++|+|++                                        
T Consensus       242 ~lt~~~~~~~~DGAaavvl~s~~~A~~~~~~~~a~i~g~~----------------------------------------  281 (394)
T PRK06445        242 VITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMAKIRSFG----------------------------------------  281 (394)
T ss_pred             cEecCcCCCCCCceEEEEEecHHHHHHCCCCceEEEEEEE----------------------------------------
Confidence               0112336899999999999999988988888999886                                        


Q ss_pred             HhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHH
Q psy5293         184 EHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAI  263 (359)
Q Consensus       184 ~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al  263 (359)
                                             ...     ..|...+.+...+++++|+++|++|+|||++|.|+.++. .+...++.|
T Consensus       282 -----------------------~~~-----~~~~~~~~~~~~a~~~al~~Agl~~~dId~~e~~d~f~~-~~l~~~e~l  332 (394)
T PRK06445        282 -----------------------FAG-----VPPAIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAV-VVLYAIKEL  332 (394)
T ss_pred             -----------------------Eec-----cCCchhcchHHHHHHHHHHHcCCCHHHcCEEEecccchH-HHHHHHHHh
Confidence                                   111     122233356788999999999999999999999999884 446666666


Q ss_pred             HhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCc
Q psy5293         264 GSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSF  343 (359)
Q Consensus       264 ~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  343 (359)
                      +.+  ..++++++....+|||.||+|+++++++++||+                              +++.|+++.+..
T Consensus       333 g~~--~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~------------------------------~~~~~~gl~~~~  380 (394)
T PRK06445        333 GLD--PETVNIKGGAIAIGHPLGATGARIVGTLARQLQ------------------------------IKGKDYGVATLC  380 (394)
T ss_pred             CCC--ccccCCCCCHHHcCCCccchHHHHHHHHHHHHH------------------------------hcCCCEEEEEEc
Confidence            543  457888888888899999999999999999997                              123689999999


Q ss_pred             CcCcceeeEEEee
Q psy5293         344 GFGGTNACLCIAE  356 (359)
Q Consensus       344 g~gG~~~~~il~~  356 (359)
                      +-||+..++|||+
T Consensus       381 ~~gg~g~a~~~e~  393 (394)
T PRK06445        381 VGGGQGGAVVLER  393 (394)
T ss_pred             ccCChhhEEEEEc
Confidence            9999999999986

>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases

Probab=99.84  E-value=2.5e-20  Score=179.92  Aligned_cols=231  Identities=24%  Similarity=0.283  Sum_probs=163.9

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHH------H----------H-
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIA------A----------F-   83 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~------~----------~-   83 (359)
                      ++..++..+|+.  .|.++|+++| |++.+|..|+++|++|.+|.+||+|+|.+.......      .          + 
T Consensus        60 ~a~~va~~lGl~~~~~~~~v~~~Casg~~al~~A~~~I~sG~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~  139 (386)
T TIGR01930        60 IARQAALLAGLPESVPAYTVNRQCASGLQAVILAAQLIRAGEADVVVAGGVESMSRVPYSLPRSRREGVDPGRFELEDQI  139 (386)
T ss_pred             HHHHHHHHcCCCCCceeeeecchhhHHHHHHHHHHHHHHCCCCCEEEEEEehhhccCccccccccccccccCccccchhh
Confidence            467788999996  4899999999 999999999999999999999999999754321100      0          0 


Q ss_pred             Hhhccccc---cCC------------------------------CC-----------CC--------------C-CC---
Q psy5293          84 CRVRALAT---QFN------------------------------NE-----------PA--------------Q-AS---  101 (359)
Q Consensus        84 ~~~~~l~~---~~~------------------------------~~-----------~~--------------~-~~---  101 (359)
                      ...+...+   ...                              .+           |.              . ..   
T Consensus       140 ~~~g~~~~~~~~~~a~~a~~y~~~yG~t~e~la~vav~~~~~A~~n~~~g~~~~~i~P~a~~~~~~~~~~~~da~~r~~~  219 (386)
T TIGR01930       140 LKDGLTDPLNGLSMGLTAENLAKKYGISREEQDEYALRSHQRAAKAWEEGLFKDEIVPVSVKGRKGPVTVSTDEGIRPNT  219 (386)
T ss_pred             cCccccccccCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCCeEEEEEeccCCCCeEeCCCCCCCCCC
Confidence            00010000   000                              00           21              0 00   


Q ss_pred             --------CC-ccC-----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293         102 --------RP-FDK-----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus       102 --------~~-fd~-----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                              ++ +++     .-+...++||+++++|++.+.+.+++.+++++|.|++                        
T Consensus       220 t~e~v~~s~~i~~P~~~l~~~d~~~~~dGAaa~vl~s~~~A~~~~~~~~~~i~g~g------------------------  275 (386)
T TIGR01930       220 TLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMSEERAKELGLTPLARIVSFA------------------------  275 (386)
T ss_pred             CHHHHhCCCCCcCCCCeeeCCccCCCCcceeEEEEecHHHHHHCCCCccEEEEEEE------------------------
Confidence                    00 111     0112236899999999999999999999889999886                        


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA  247 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~  247 (359)
                                                             ...     ..|.+...+..++++++|+++|++|+|||++|.
T Consensus       276 ---------------------------------------~~~-----~~~~~~~~~~~~a~~~a~~~Agi~~~did~~e~  311 (386)
T TIGR01930       276 ---------------------------------------VAG-----VDPEIMGLGPVPAIPKALKKAGLSISDIDLFEI  311 (386)
T ss_pred             ---------------------------------------Eec-----CCCccccccHHHHHHHHHHHcCCCHHHCCeeeh
Confidence                                                   111     011222235568999999999999999999999


Q ss_pred             ccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc
Q psy5293         248 HATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAV  327 (359)
Q Consensus       248 h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~  327 (359)
                      |++++. .+...+++++.  +..++++++.+..+|||.+|+|+.+++++++||+                       ++ 
T Consensus       312 ~d~fa~-~~~~~~e~lG~--~~~pvn~~GG~l~~Ghp~gasG~~~~~e~~~qL~-----------------------g~-  364 (386)
T TIGR01930       312 NEAFAA-QVLACIKELGL--DLEKVNVNGGAIALGHPLGASGARIVTTLLHELK-----------------------RR-  364 (386)
T ss_pred             cchhHH-HHHHHHHHhCC--ChhhcCCCCChHhhCCcHHHHHHHHHHHHHHHHH-----------------------hc-
Confidence            999873 33444444432  2346777888888999999999999999999998                       22 


Q ss_pred             cccccCCccEEEEeCcCcCcceeeEEEe
Q psy5293         328 TEWKTDGRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~gG~~~~~il~  355 (359)
                            +.|+++++..+.||...++|||
T Consensus       365 ------~~~~gl~~~~~~gG~g~~~~~e  386 (386)
T TIGR01930       365 ------GGRYGLATICIGGGQGIAVILE  386 (386)
T ss_pred             ------CCCEEEEEEeccCCceEEEEeC
Confidence                  3689999999999999999986

This model represents a large family of enzymes which catalyze the thiolysis of a linear fatty acid CoA (or acetoacetyl-CoA) using a second CoA molecule to produce acetyl-CoA and a CoA-ester product two carbons shorter (or, alternatively, the condensation of two molecules of acetyl-CoA to produce acetoacetyl-CoA and CoA). This enzyme is also known as "thiolase", "3-ketoacyl-CoA thiolase", "beta-ketothiolase" and "Fatty oxidation complex beta subunit". When catalyzing the degradative reaction on fatty acids the corresponding EC number is 2.3.1.16. The condensation reaction corresponds to 2.3.1.9. Note that the enzymes which catalyze the condensation are generally not involved in fatty acid biosynthesis, which is carried out by a decarboxylating condensation of acetyl and malonyl esters of acyl carrier proteins. Rather, this activity may produce acetoacetyl-CoA for pathways such as IPP biosynthesis in the absence of sufficient fatt

>PRK08142 acetyl-CoA acetyltransferase; Provisional

Probab=99.84  E-value=7.1e-20  Score=176.10  Aligned_cols=243  Identities=16%  Similarity=0.133  Sum_probs=163.9

Q ss_pred             HHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHH---H----HH------HHH-hhccc
Q psy5293          26 GAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQL---S----IA------AFC-RVRAL   89 (359)
Q Consensus        26 ~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~---~----~~------~~~-~~~~l   89 (359)
                      ..++..+|+++ |...++++| |+..++..|+.+|++|.+|+|||+|+|++....   .    +.      .+. ..+..
T Consensus        62 ~~~~~~lGl~~~~~~~v~~gg~s~~~a~~~A~~~I~sG~~d~vLvvg~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  141 (388)
T PRK08142         62 ASMVDYLGLKLRHVDSTETGGSSYLAHVGHAAQAIAAGKCSVALITLAGRPRSEGSSGTEPRNWGADAPDAPFEAPYGPT  141 (388)
T ss_pred             HHHHHhCCCCCeeeccccCCcHHHHHHHHHHHHHHHcCCCCEEEEEeeeecccCCccccccccccccccccchhcccccc
Confidence            35888999987 888999999 999999999999999999999999999753210   0    00      000 00000


Q ss_pred             c--------c----------------------cCCCCCCCCC-CCccCC--------------CCCceecceeeEEeecc
Q psy5293          90 A--------T----------------------QFNNEPAQAS-RPFDKR--------------RDGFVMGEGSAILVLEE  124 (359)
Q Consensus        90 ~--------~----------------------~~~~~~~~~~-~~fd~~--------------~~G~~~geGa~a~~l~~  124 (359)
                      .        +                      +-..+|.... ++++.+              -+...+.||+++++|.+
T Consensus       142 ~~~~~Al~a~~ym~~yG~t~e~la~vav~~~~~A~~NP~A~~r~~~t~e~vl~s~~Ia~Pl~l~d~~~~~DGAaA~vl~s  221 (388)
T PRK08142        142 THNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMIADPLHRLDCCVVTDGGGALVVVR  221 (388)
T ss_pred             cHHHHHHHHHHHHHHHCcCHHHHHHHHHHHHHHhccCChhhcCCCCCHHHHhcCCcccCCchhhccCcccCceEEEEEec
Confidence            0        0                      0001232111 111110              12234689999999999


Q ss_pred             hHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccc
Q psy5293         125 LDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHA  204 (359)
Q Consensus       125 ~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~a  204 (359)
                      .+.+.+.+. +..+|.+++.                                                            
T Consensus       222 ~~~A~~l~~-~~v~I~g~~~------------------------------------------------------------  240 (388)
T PRK08142        222 PEIARSLKR-PLVKVLGAGE------------------------------------------------------------  240 (388)
T ss_pred             HHHHhhcCC-CCEEEEEEEE------------------------------------------------------------
Confidence            998876653 3367777751                                                            


Q ss_pred             ccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC---------------C
Q psy5293         205 IGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP---------------A  269 (359)
Q Consensus       205 ig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~---------------~  269 (359)
                         ..+......++........+++++++++|++|+|||++|+|++++. .....+++|+.+..               .
T Consensus       241 ---~~~~~~~~~~~~~~~~~~~aa~~a~~~AGi~~~did~~elyD~Fs~-~~~~~~E~lGl~~~Ge~~~~v~~g~~~~~~  316 (388)
T PRK08142        241 ---AIKGQMGGKVDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTI-TVLMQLEDLGFCKKGEGGKFVADGNLISGV  316 (388)
T ss_pred             ---ecCCccccCcccccHHHHHHHHHHHHHcCCCHHHCCEEEEeccchH-HHHHHHHHcCCCCCCchHHHHHCCCcccCC
Confidence               1111111122222345578999999999999999999999999995 45777777755432               2


Q ss_pred             CCceeccccccc--chHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCccc-ccccCCccEEEEeCcCc-
Q psy5293         270 QRLMVSSTKGAH--GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVT-EWKTDGRRVALKNSFGF-  345 (359)
Q Consensus       270 ~~~~v~~~k~~~--Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~g~-  345 (359)
                      +++||+...+.+  |||.+|+|+.+++++++||+                       +++. ++|+++.+++++++.|. 
T Consensus       317 G~lPvN~sGG~l~~G~p~gatG~~~~~E~~~QLr-----------------------G~ag~~rQV~~a~~gl~~~~Gg~  373 (388)
T PRK08142        317 GKLPFNTDGGGLCNNHPANRGGMTKVIEAVRQLR-----------------------GEAHPAVQVPNCDLALAHGTGGL  373 (388)
T ss_pred             CCccccCCChhhcCCCcCcccHHHHHHHHHHHHc-----------------------CCCCCCCCCCCCcEEEEeCCCCC
Confidence            568885555544  89999999999999999999                       6664 46888899999999873 


Q ss_pred             Cc---ceeeEEEee
Q psy5293         346 GG---TNACLCIAE  356 (359)
Q Consensus       346 gG---~~~~~il~~  356 (359)
                      .|   .++.+|+++
T Consensus       374 ~~~~~~~~~~vl~~  387 (388)
T PRK08142        374 LGSRHGSATLILER  387 (388)
T ss_pred             CcCCCceEEEEEec
Confidence            22   335666654

>PRK08256 lipid-transfer protein; Provisional

Probab=99.84  E-value=5.7e-20  Score=177.84  Aligned_cols=248  Identities=19%  Similarity=0.200  Sum_probs=162.6

Q ss_pred             HHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH----------HHHHH-------h-h
Q psy5293          27 AISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS----------IAAFC-------R-V   86 (359)
Q Consensus        27 ~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~----------~~~~~-------~-~   86 (359)
                      .++..+|+++ |.++|+++| ||+.||..|+++|++|++|++||+|+|++.....          ...+.       . .
T Consensus        61 ~~~~~lGl~~~~~~~v~~~caSg~~ai~~A~~~I~sG~~d~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  140 (391)
T PRK08256         61 RALYEVGMTGIPIVNVNNNCSTGSTALFLARQAVRSGAADCALALGFEQMQPGALGSVWDDRPSPLERFDKALAELQGFD  140 (391)
T ss_pred             HHHHHcCCCCCCCcccccccHHHHHHHHHHHHHHHCCCCCEEEEEEEeeccccccccccccccchhhhhhhhhhhhcccc
Confidence            4667899998 999999999 9999999999999999999999999998642110          00000       0 0


Q ss_pred             cc---------ccccC----------------------CCCCCCCC-CC------------ccCC--CCCceecceeeEE
Q psy5293          87 RA---------LATQF----------------------NNEPAQAS-RP------------FDKR--RDGFVMGEGSAIL  120 (359)
Q Consensus        87 ~~---------l~~~~----------------------~~~~~~~~-~~------------fd~~--~~G~~~geGa~a~  120 (359)
                      +.         .+..+                      ..+|.... ++            +++-  -+...+.||++++
T Consensus       141 ~~~~~~~~~a~~a~~y~~~~G~t~e~~a~vav~~~~~A~~np~A~~~~~~t~e~~~~s~~i~~Pl~~~d~~~~~DGAaA~  220 (391)
T PRK08256        141 PAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTLEDVLASPMIWGPLTRLQCCPPTCGAAAA  220 (391)
T ss_pred             cCCccHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHhhhcCChhhcCCCCCHHHHhcCCcccCCCcHhhcCCCCCCeEEE
Confidence            00         00000                      00121110 01            1110  1122368999999


Q ss_pred             eecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCccccccccc
Q psy5293         121 VLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACAT  200 (359)
Q Consensus       121 ~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAs  200 (359)
                      +|.+.+.+.+.+..++++|.+.+....                 ++                                  
T Consensus       221 il~s~~~a~~~~~~~~v~i~g~~~~~~-----------------~~----------------------------------  249 (391)
T PRK08256        221 IVCSEEFARKHGLDRAVEIVAQAMTTD-----------------TP----------------------------------  249 (391)
T ss_pred             EEecHHHHHhcCCCCCEEEEEEEEecc-----------------cc----------------------------------
Confidence            999998887665345577777541000                 00                                  


Q ss_pred             CcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC------------
Q psy5293         201 GAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP------------  268 (359)
Q Consensus       201 g~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~------------  268 (359)
                         .+....+......    ......+++++++++|++++|||++|+|++++. .....+++|+.+..            
T Consensus       250 ---~~~~~~~~~~~~~----~~~~~~a~~~a~~~ag~~~~DiD~~ei~d~f~~-~~l~~le~lg~~~~Ge~~~~~~~G~~  321 (391)
T PRK08256        250 ---STFDGRSMIDLVG----YDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSA-NELLTYEALGLCPEGEAEKFIDDGDN  321 (391)
T ss_pred             ---ccccccccccccc----cHHHHHHHHHHHHHcCCCHHHCCEEeeccCCcH-HHHHHHHHcCCCCCCchHHHHHCCCc
Confidence               0000000000000    134567899999999999999999999999985 44666666654421            


Q ss_pred             --CCCceeccccccc--chHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcC
Q psy5293         269 --AQRLMVSSTKGAH--GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFG  344 (359)
Q Consensus       269 --~~~~~v~~~k~~~--Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  344 (359)
                        ++++|||...+.+  |||.||+|+.+++++++||+                       +++.++|+++.+++++++.|
T Consensus       322 ~~~G~~pvN~~GG~ls~Ghp~gasG~~~~~e~~~QL~-----------------------g~ag~~Qv~~~~~~l~~~~G  378 (391)
T PRK08256        322 TYGGRWVVNPSGGLLSKGHPLGATGLAQCAELTWQLR-----------------------GTAGARQVEGARLALQHNLG  378 (391)
T ss_pred             cCCCCeeeCCCCccccCCCCccHHHHHHHHHHHHHhc-----------------------CCcCCCcCCccceEEEeccc
Confidence              3456776555554  99999999999999999999                       67777888889999999999


Q ss_pred             cCcceeeEEEee
Q psy5293         345 FGGTNACLCIAE  356 (359)
Q Consensus       345 ~gG~~~~~il~~  356 (359)
                      .+.++...|+++
T Consensus       379 ~~~~~~~~v~~~  390 (391)
T PRK08256        379 LGGACVVTLYQR  390 (391)
T ss_pred             cceeEEEEEEec
Confidence            655555556654

>PRK08313 acetyl-CoA acetyltransferase; Provisional

Probab=99.84  E-value=8.6e-20  Score=175.97  Aligned_cols=248  Identities=19%  Similarity=0.135  Sum_probs=170.7

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH--------------------HH
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS--------------------IA   81 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~--------------------~~   81 (359)
                      ++..++..+|++. |.+.|+++| ||..++..|+++|++|++|.+||+|+|.+.+...                    +.
T Consensus        64 ~~~~va~~LGl~~~~~~~v~~~casg~~al~~A~~~I~sG~~~~vLVvg~e~~s~~~~~~~~~~~~~~~~~~g~~~~~~~  143 (386)
T PRK08313         64 PELFLADALGATGKPLIRVHTAGSVGGSTAVVAASLVQSGVYRRVLAVAWEKQSESNAMWALSIPVPFTKPVGAGAGGYF  143 (386)
T ss_pred             chHHHHHhcCCCCCceEEEeccCHHHHHHHHHHHHHHHCCCCCEEEEEEEEEccCCccccccccccccccccccchHHHH
Confidence            4568999999986 999999999 9999999999999999999999999997543200                    00


Q ss_pred             H------HHhhccccc-----------cCCCCCCCCCC-C-ccC--------------CCCCceecceeeEEeecchHHH
Q psy5293          82 A------FCRVRALAT-----------QFNNEPAQASR-P-FDK--------------RRDGFVMGEGSAILVLEELDHA  128 (359)
Q Consensus        82 ~------~~~~~~l~~-----------~~~~~~~~~~~-~-fd~--------------~~~G~~~geGa~a~~l~~~~~a  128 (359)
                      .      +...|....           +...+|....+ + ++.              .-+.....||+++++|.+.+.+
T Consensus       144 al~a~~ym~~~G~~~e~la~vav~~~~~A~~NP~A~~r~~~~t~e~v~~s~~ia~Pl~~~d~~~~~DGAaAvvl~s~e~a  223 (386)
T PRK08313        144 APHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYAHLHQPDITLEKVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAA  223 (386)
T ss_pred             HHHHHHHHHHHCcCHHHHHHHHHHHHHHHccCcHHhcCCCCCCHHHHhcCCcccCCCchhccCCCCCceEEEEEecHHHH
Confidence            0      011111110           00112322111 1 221              1122347899999999999988


Q ss_pred             HhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccccccc
Q psy5293         129 LARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS  208 (359)
Q Consensus       129 ~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~  208 (359)
                      .+.+.++..+|.|++..                                                               
T Consensus       224 ~~l~~~~~~~I~g~~~~---------------------------------------------------------------  240 (386)
T PRK08313        224 DAAAGRPVAWIHGTAMR---------------------------------------------------------------  240 (386)
T ss_pred             HhcCCCCCeEEEEEEEE---------------------------------------------------------------
Confidence            76665665677777510                                                               


Q ss_pred             CCCccC-CCCCcChHHHHHHHHHHHHHcCCC--CCCccEEEeccCCCCcccHHHHHHHHhhcC--------------CCC
Q psy5293         209 GDGHHL-TSPREDGRGALLAMTRALIDANLS--PGDISYINAHATSTPLGDVIELKAIGSLFP--------------AQR  271 (359)
Q Consensus       209 ~~~~~~-~~p~~~~~~~~~a~~~al~~agl~--~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--------------~~~  271 (359)
                      .+.... ..+.........+++++++++|++  ++|||++|+|++++. .....+++|+.+..              +++
T Consensus       241 ~~~~~~~~~~~~~~~~~~~a~~~a~~~Agi~~p~~Did~~el~d~F~~-~~~~~~e~lGl~~~G~~~~~~~~G~~~~~G~  319 (386)
T PRK08313        241 TEPLAFAGRDQVNPQAGRDAAAALWKAAGITDPRDEIDVAEIYVPFSW-FEPMWLENLGFAPEGEGWKLTEAGETAIGGR  319 (386)
T ss_pred             ecCcccccccccccHHHHHHHHHHHHHcCCCCChhhCCEEEeccCChH-HHHHHHHHcCCCCCCchHHHHHCCCcCCCCC
Confidence            000000 001112256678999999999998  699999999999995 44666666654432              456


Q ss_pred             ceeccccccc-chHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcC-cCcce
Q psy5293         272 LMVSSTKGAH-GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFG-FGGTN  349 (359)
Q Consensus       272 ~~v~~~k~~~-Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~gG~~  349 (359)
                      +|||...+.+ |||.||+|+.+++++++||+                       +++.++|+++.+++++++.| .+..+
T Consensus       320 ~pvN~~GG~l~g~p~gatG~~~~~e~~~qlr-----------------------G~ag~rQv~~a~~~l~~~~Gg~~~~~  376 (386)
T PRK08313        320 LPVNPSGGVLSSNPIGASGMIRFAEAALQVM-----------------------GKAGEHQVDGARKALGHAYGGGSQFF  376 (386)
T ss_pred             ccccCCCcccccCCCcHHHHHHHHHHHHHhc-----------------------ccccCCcCCCccEEEEeccCCcceEE
Confidence            7886666655 99999999999999999999                       77888898889999999997 44455


Q ss_pred             eeEEEeecC
Q psy5293         350 ACLCIAEYK  358 (359)
Q Consensus       350 ~~~il~~~~  358 (359)
                      ..+|+++-+
T Consensus       377 ~~~v~~~~~  385 (386)
T PRK08313        377 SMWVVGSEK  385 (386)
T ss_pred             EEEEEecCC
Confidence            556666543

>PRK08235 acetyl-CoA acetyltransferase; Provisional

Probab=99.84  E-value=5.4e-20  Score=177.58  Aligned_cols=233  Identities=21%  Similarity=0.201  Sum_probs=163.6

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH-------------HHh--
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA-------------FCR--   85 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~-------------~~~--   85 (359)
                      ++..++..+|+.  -|.++|+++| ||+.||..|+++|++|.+|++||+|+|++........             ...  
T Consensus        65 ~~~~~~~~~Gl~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLvvG~E~ms~~p~~~~~~~~~~~~~~~~~~~~~~  144 (393)
T PRK08235         65 PSRQAARAAGIPWEVQTETVNKVCASGLRAVTLADQIIRAGDASVIVAGGMESMSNAPYILPGARWGYRMGDNEVIDLMV  144 (393)
T ss_pred             HHHHHHHHcCCCCCcceeehhhhhhHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccccccccCCchhhhhhc
Confidence            566788899994  4999999999 9999999999999999999999999998765321000             000  


Q ss_pred             -hc-----------cccc----cC-------------------C-------------------------CCCCCCCC---
Q psy5293          86 -VR-----------ALAT----QF-------------------N-------------------------NEPAQASR---  102 (359)
Q Consensus        86 -~~-----------~l~~----~~-------------------~-------------------------~~~~~~~~---  102 (359)
                       .+           ..+.    .+                   .                         -+|+...|   
T Consensus       145 ~~~~~~~~~~~~~~~~A~~~~~~ygitre~~d~~avksh~~a~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~r~~~  224 (393)
T PRK08235        145 ADGLTCAFSGVHMGVYGGEVAKELGISREAQDEWAYRSHQRAVSAHEEGRFEEEIVPVTIPQRKGDPIVVAKDEAPRKDT  224 (393)
T ss_pred             ccccccccCCCCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHcCCCCceEeeeEecCCCCCceEeCCCCCCCCCC
Confidence             00           0000    00                   0                         00222111   


Q ss_pred             ----------CccC-----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293         103 ----------PFDK-----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus       103 ----------~fd~-----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                                .|++     ..+...++||+++++|.+.+.+.+.+.+++++|.+.+                        
T Consensus       225 t~e~~~~~~~v~~p~g~lt~~~~~~~~DGAaa~vl~s~~~A~~~~~~p~~~i~g~~------------------------  280 (393)
T PRK08235        225 TIEKLAKLKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLATILAHT------------------------  280 (393)
T ss_pred             CHHHHhcCCCcccCCCcEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEEE------------------------
Confidence                      1111     0112236899999999999999888888888888765                        


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA  247 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~  247 (359)
                                                             ....     .+.........+++++|+++|++|+|||++|+
T Consensus       281 ---------------------------------------~~~~-----~~~~~~~~~~~a~~~al~~agl~~~did~~e~  316 (393)
T PRK08235        281 ---------------------------------------AIAV-----EAKDFPRTPGYAINALLEKTGKTVEDIDLFEI  316 (393)
T ss_pred             ---------------------------------------eccc-----ChhhhcchHHHHHHHHHHHhCCCHHHCCeehh
Confidence                                                   1000     01111134468999999999999999999998


Q ss_pred             ccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc
Q psy5293         248 HATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAV  327 (359)
Q Consensus       248 h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~  327 (359)
                      |+.++. .....++.|+.+  ..++++++.+..+|||+||||+++++++++||+                       ++.
T Consensus       317 ~d~f~~-~~l~~~e~lg~~--~~pvN~~GG~la~Ghp~gasG~~~~~~l~~qL~-----------------------~~~  370 (393)
T PRK08235        317 NEAFAA-VALASTEIAGID--PEKVNVNGGAVALGHPIGASGARIIVTLIHELK-----------------------RRG  370 (393)
T ss_pred             cchhHH-HHHHHHHHhCCC--cccCCcCCchHHhCCcHHHHHHHHHHHHHHHHH-----------------------hcC
Confidence            888763 223344444432  457888999999999999999999999999998                       221


Q ss_pred             cccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         328 TEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                             .++++.+....||...++|||+.
T Consensus       371 -------~~~g~~~~c~~gG~g~a~~~e~~  393 (393)
T PRK08235        371 -------GGIGIAAICSGGGQGDAVLIEVH  393 (393)
T ss_pred             -------CCeEEEEEcccccceEEEEEEeC
Confidence                   46788888888899999999873

>PRK06205 acetyl-CoA acetyltransferase; Provisional

Probab=99.84  E-value=6e-20  Score=178.09  Aligned_cols=235  Identities=23%  Similarity=0.238  Sum_probs=167.4

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHH-------------HHHh--
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIA-------------AFCR--   85 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~-------------~~~~--   85 (359)
                      ++..++..+|+.  -|.++|+++| ||+.|+..|+++|++|.+|++||+|+|++.......             .+..  
T Consensus        65 ~a~~va~~~Gl~~~~p~~~V~~~CaSg~~Al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~  144 (404)
T PRK06205         65 IGRVAALDAGLPVTVPGMQLDRRCGSGLQAVITAAMQVQTGAADVVIAGGAESMSNVEFYTTDMRWGVRGGGVQLHDRLA  144 (404)
T ss_pred             HHHHHHHHcCCCCCCceeehhhhhhHHHHHHHHHHHHHHcCCCCEEEEeeehhhccCcccccccccccccCcchhhhhhc
Confidence            466788999996  4999999999 999999999999999999999999999865321000             0000  


Q ss_pred             --------------hcc--ccccC-----------------------C---------------------C----CCCCCC
Q psy5293          86 --------------VRA--LATQF-----------------------N---------------------N----EPAQAS  101 (359)
Q Consensus        86 --------------~~~--l~~~~-----------------------~---------------------~----~~~~~~  101 (359)
                                    ..+  .+..+                       .                     .    +|+...
T Consensus       145 ~~~~~~~~~~~~~~~~m~~~a~~~~~~~gitre~~~~~Av~sh~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~da~~  224 (404)
T PRK06205        145 RGRETAGGRRFPVPGGMIETAENLRREYGISREEQDALAVRSHQRAVAAQEAGRFDDEIVPVTVPQRKGDPTVVDRDEHP  224 (404)
T ss_pred             cCcccccccccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcceeeeeEecCCCCCceEeccCCCC
Confidence                          000  00000                       0                     0    111111


Q ss_pred             ------------CC-c---cC-----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhccc
Q psy5293         102 ------------RP-F---DK-----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGS  160 (359)
Q Consensus       102 ------------~~-f---d~-----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~  160 (359)
                                  +| |   ++     ..+...+.||+++++|.+.+.+.+.+.+++++|.+++                 
T Consensus       225 r~~~t~e~~~~~~~v~~~~~p~g~lt~~~~~~~~DGAaa~vl~se~~A~~~~~~p~~~i~g~~-----------------  287 (404)
T PRK06205        225 RADTTLESLAKLRPIMGKQDPEATVTAGNASGQNDAAAACLVTTEDKAEELGLRPLARLVSWA-----------------  287 (404)
T ss_pred             CCCCCHHHHhcCCCcCccCCCCCceeCcccCCCCCceeEEEEecHHHHHHCCCCceEEEEEEE-----------------
Confidence                        11 1   11     0111225799999999999999988888888888876                 


Q ss_pred             ccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCC
Q psy5293         161 YNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPG  240 (359)
Q Consensus       161 ~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~  240 (359)
                                                                    ...+     .|.....+...+++++|+++|++|+
T Consensus       288 ----------------------------------------------~~~~-----~~~~~~~~~~~a~~~al~~Agl~~~  316 (404)
T PRK06205        288 ----------------------------------------------VAGV-----EPSRMGIGPVPATEKALARAGLTLD  316 (404)
T ss_pred             ----------------------------------------------Eecc-----CCccccccHHHHHHHHHHHcCCCHH
Confidence                                                          1111     1111224567899999999999999


Q ss_pred             CccEEEeccCCCCcccHHHHHHHHhhcC-CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC
Q psy5293         241 DISYINAHATSTPLGDVIELKAIGSLFP-AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG  319 (359)
Q Consensus       241 dI~~ie~h~~~t~~~d~~E~~al~~~~~-~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~  319 (359)
                      |||++|.|+.++. .....+++|+.+.. ..++++++.+..+|||.||+|+++++++++||++                 
T Consensus       317 Did~~ei~d~f~~-~~l~~~e~lg~~~~~~~~vN~~GG~la~Ghp~gatG~~~v~e~~~qL~~-----------------  378 (404)
T PRK06205        317 DIDLIELNEAFAA-QVLAVLKEWGFGADDEERLNVNGSGISLGHPVGATGGRILATLLRELQR-----------------  378 (404)
T ss_pred             HCCEeeeccHHHH-HHHHHHHHhCcCcccCCCcCCCCCHHhhCCChhhhHHHHHHHHHHHHHh-----------------
Confidence            9999999888773 33445555543321 1368888888888999999999999999999982                 


Q ss_pred             CCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         320 GYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                            +       +.|+++++...-||...++|||+.
T Consensus       379 ------~-------~~~~gl~~~c~~gg~g~a~~~e~~  403 (404)
T PRK06205        379 ------R-------QARYGLETMCIGGGQGLAAVFERV  403 (404)
T ss_pred             ------c-------CCCeEEEEEeccCChhhEEEEEec
Confidence                  1       268999999999999999999985

>PRK06025 acetyl-CoA acetyltransferase; Provisional

Probab=99.83  E-value=6.4e-20  Score=176.11  Aligned_cols=231  Identities=20%  Similarity=0.232  Sum_probs=162.1

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH-HHhhc-----------c
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA-FCRVR-----------A   88 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~-~~~~~-----------~   88 (359)
                      ++.+++...|+.  -|.+||+..| ||++||.+|+++|++|++|++|+||+|+|+....... ..+.+           .
T Consensus        69 ~aR~~al~aglp~~vp~~tvnr~C~Sgl~ai~~aa~~I~~G~~~~~laGG~EsmS~~P~~~~~~~~~~~~~~~~~~~~~~  148 (417)
T PRK06025         69 LGRMAALDAGYDIKASGVTLDRFCGGGITSVNLAAAQIMSGMEDLVIAGGTEMMSYTAAMAAEDMAAGKPPLGMGSGNLR  148 (417)
T ss_pred             HHHHHHHhCCCCCCCCeeeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeeccCCCcccccccccCCCCcccccccCcc
Confidence            588888888884  5999999999 9999999999999999999999999999875442100 00000           0


Q ss_pred             ccccCC-------------------------------------------CC--C------------CCCC----------
Q psy5293          89 LATQFN-------------------------------------------NE--P------------AQAS----------  101 (359)
Q Consensus        89 l~~~~~-------------------------------------------~~--~------------~~~~----------  101 (359)
                      +...+.                                           ++  |            |+..          
T Consensus       149 ~~~~~~~~~Mg~~ae~~a~~~~isRe~~D~~A~~Sh~rA~~A~~~G~f~~eIvPv~~~~~~~~~~~De~~R~~~t~e~la  228 (417)
T PRK06025        149 LRALHPQSHQGVCGDAIATMEGITREALDALGLESQRRAARAIKEGRFDKSLVPVYRDDGSVALDHEEFPRPQTTAEGLA  228 (417)
T ss_pred             cccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCcCeEeeEEcCCCCEEecCCCCCCCCCCHHHHc
Confidence            000000                                           00  0            0000          


Q ss_pred             --CC-ccC------CCCCc-------------------------eecceeeEEeecchHHHHhcCCcEEEEEeecccccc
Q psy5293         102 --RP-FDK------RRDGF-------------------------VMGEGSAILVLEELDHALARSANIYAEIIGYGMIDL  147 (359)
Q Consensus       102 --~~-fd~------~~~G~-------------------------~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~  147 (359)
                        +| |..      ...|.                         .+.||+++++|.+.+.+.+.+.+++++|.+++    
T Consensus       229 ~L~p~F~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~vTagNss~~sDGAAAvVL~See~A~~lg~~p~a~I~g~~----  304 (417)
T PRK06025        229 ALKPAFTAIADYPLDDKGTTYRGLINQKYPDLEIKHVHHAGNSSGVVDGAAALLLASKAYAEKHGLKPRARIVAMA----  304 (417)
T ss_pred             CCCCCccccccccccCCccccccccccccccccccccccccccCCCCcceEEEEEecHHHHHHcCCCCcEEEEEEE----
Confidence              22 331      01232                         25789999999999999888888888888876    


Q ss_pred             hhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHH
Q psy5293         148 SDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLA  227 (359)
Q Consensus       148 ~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a  227 (359)
                                                                                 ...+     .|...+.++..+
T Consensus       305 -----------------------------------------------------------~a~~-----~p~~~~~~p~~A  320 (417)
T PRK06025        305 -----------------------------------------------------------NMGD-----DPTLMLNAPVPA  320 (417)
T ss_pred             -----------------------------------------------------------EecC-----CchhhcccHHHH
Confidence                                                                       1111     122222355789


Q ss_pred             HHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCC
Q psy5293         228 MTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLV  305 (359)
Q Consensus       228 ~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~i  305 (359)
                      ++++|+++|++++|||++|.|..++.    .+. ...+.++  ..++++++.+..+|||.|+||++++++++++|++   
T Consensus       321 i~~aL~~AGl~~~DID~~ei~eaFa~----~~l-~~~~~lg~~~~~vN~~GG~ia~GHp~GaTGa~~v~~ll~qL~~---  392 (417)
T PRK06025        321 AKKVLAKAGLTKDDIDLWEINEAFAV----VAE-KFIRDLDLDRDKVNVNGGAIALGHPIGATGSILIGTVLDELER---  392 (417)
T ss_pred             HHHHHHHcCCCHHHCcEEEEchHHHH----HHH-HHHHHcCCChhhccccCCHHhcCCchhHHHHHHHHHHHHHHHH---
Confidence            99999999999999999998866542    111 1122222  3578888898899999999999999999999981   


Q ss_pred             CCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         306 PPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       306 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                                          +       +.+++++.-.+.||...++|||+.
T Consensus       393 --------------------~-------g~~~Gl~~~c~~GG~g~A~lle~~  417 (417)
T PRK06025        393 --------------------R-------GLKRGLVTMCAAGGMAPAIIIERV  417 (417)
T ss_pred             --------------------h-------CCCeEEEEEEeeccceeEEEEEeC
Confidence                                1       146788888889999999999973

>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed

Probab=99.83  E-value=2.6e-19  Score=174.66  Aligned_cols=234  Identities=21%  Similarity=0.239  Sum_probs=160.7

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHH---------------H-
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAF---------------C-   84 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~---------------~-   84 (359)
                      ++..++..+|+.  .|.++|+++| ||+.|+..|+++|++|++|++||+|+|+|.........               . 
T Consensus        68 ~ar~~a~~aGl~~~~P~~tV~~aCaSG~~Ai~~Aa~~I~sG~~dvvLvgG~Esms~~~~~~~~~~~~~~~~~~~~~~~~~  147 (428)
T PRK08963         68 IAREIVLGTGMNVHTDAYSVSRACATSFQAVANVAESIMAGTIDIGIAGGADSSSVLPIGVSKKLARALVDLNKARTLGQ  147 (428)
T ss_pred             HHHHHHHHCCCCCCCcceeehhhhHHHHHHHHHHHHHHHCCCCCEEEEecccccCCCccccccccccchhccccccccCc
Confidence            466788999996  4999999999 99999999999999999999999999998643210000               0 


Q ss_pred             ------h------h---ccc------------ccc----CC------------------CC----------------CCC
Q psy5293          85 ------R------V---RAL------------ATQ----FN------------------NE----------------PAQ   99 (359)
Q Consensus        85 ------~------~---~~l------------~~~----~~------------------~~----------------~~~   99 (359)
                            .      .   ..+            +..    +.                  .+                |..
T Consensus       148 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~A~~~~~~ygisre~~~~~avksh~~a~~~~~~g~~~~ei~p~~~~p~a  227 (428)
T PRK08963        148 RLKLFSRLRLRDLLPVPPAVAEYSTGLRMGDTAEQMAKTYGISREEQDALAHRSHQLAAQAWAEGKLDDEVMTAHVPPYK  227 (428)
T ss_pred             ccccccccchhhccccCcccccccCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccceeeEEecCCc
Confidence                  0      0   000            000    00                  00                110


Q ss_pred             -------CCC-------------CccCC------CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhh
Q psy5293         100 -------ASR-------------PFDKR------RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSS  153 (359)
Q Consensus       100 -------~~~-------------~fd~~------~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~  153 (359)
                             ..|             .|++.      .+...++||+++++|.+.+.+.+.+.++.++|.+++          
T Consensus       228 ~~~~~D~~~r~~~t~e~~~~~~~v~~p~~g~lt~~~~~~~~DGAaA~vl~see~A~~l~~~p~~~i~g~~----------  297 (428)
T PRK08963        228 QPLEEDNNIRGDSTLEDYAKLRPAFDRKHGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYA----------  297 (428)
T ss_pred             eeeCCCCCCCCCCCHHHHhcCCccccCCCCceehhhcCCCCCceEEEEEecHHHHHHcCCCccEEEEEEe----------
Confidence                   000             01110      011225899999999999999888888888888775          


Q ss_pred             hhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCC-cChHHHHHHHHHHH
Q psy5293         154 NNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPR-EDGRGALLAMTRAL  232 (359)
Q Consensus       154 ~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~-~~~~~~~~a~~~al  232 (359)
                                                                           ...     ..|. ........+++++|
T Consensus       298 -----------------------------------------------------~~~-----~~~~~~~~~~~~~a~~~al  319 (428)
T PRK08963        298 -----------------------------------------------------FAA-----IDVWQDMLLGPAYATPLAL  319 (428)
T ss_pred             -----------------------------------------------------ccc-----CCchhhhhhHHHHHHHHHH
Confidence                                                                 110     0010 01234567899999


Q ss_pred             HHcCCCCCCccEEEeccCCCCcccHHHHHHHH--hhc----C----CC-----CceecccccccchHHHhHHHHHHHHHH
Q psy5293         233 IDANLSPGDISYINAHATSTPLGDVIELKAIG--SLF----P----AQ-----RLMVSSTKGAHGHLLGAAGNLESAFTI  297 (359)
Q Consensus       233 ~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~--~~~----~----~~-----~~~v~~~k~~~Gh~~~AsG~~~~~~~~  297 (359)
                      +++|++++|||++|+|++++. ....+++.|.  ..+    +    .+     ++++++.-...|||.||+|+.++++++
T Consensus       320 ~~AGl~~~DiD~~Ei~d~Fa~-~~l~~~e~l~~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gasG~~~~~e~~  398 (428)
T PRK08963        320 ERAGLTLADLTLIDMHEAFAA-QTLANLQMFASERFAREKLGRSQAIGEVDMSKFNVLGGSIAYGHPFAATGARMITQTL  398 (428)
T ss_pred             HHcCCCHHHCCEEEEccccHH-HHHHHHHHhcCchhhhhcccccccCCCCCCCccCCCCCHHhcCCCccccHHHHHHHHH
Confidence            999999999999999999984 4455566662  100    0    12     344444444459999999999999999


Q ss_pred             HHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         298 LAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       298 ~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                      +||+                       ++.       .++++++..+-||...++|||+
T Consensus       399 ~qLr-----------------------g~~-------g~~gl~~~c~ggG~g~a~~ie~  427 (428)
T PRK08963        399 HELR-----------------------RRG-------GGLGLTTACAAGGLGAAMVLEV  427 (428)
T ss_pred             HHHh-----------------------hcC-------CCEEEEEEccccChhhEEEEEe
Confidence            9998                       322       4689999999999999999986

>PRK06157 acetyl-CoA acetyltransferase; Validated

Probab=99.83  E-value=3.1e-19  Score=172.78  Aligned_cols=238  Identities=15%  Similarity=0.079  Sum_probs=157.5

Q ss_pred             HHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH--H------HHH----------
Q psy5293          25 AGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI--A------AFC----------   84 (359)
Q Consensus        25 a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~--~------~~~----------   84 (359)
                      ...++..+|+.+ |.++|+.+| ||+.||..|+++|++|++|++||+|+|++......  .      .+.          
T Consensus        67 ~~~~a~~lGl~~~~~~~v~~~c~sg~~ai~~A~~~I~sG~~d~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (398)
T PRK06157         67 GTPLSRALRLPNIPVTRVENFCATGSEAFRGAVYAVASGAYDIALALGVEKLKDTGYGGLPVANPGTLADMTMPNVTAPG  146 (398)
T ss_pred             hHHHHHHcCCCCCCEEEEecccHHHHHHHHHHHHHHHCCCCCEEEEEEEeecccCccccccccccccchhcccccCchHH
Confidence            456888999977 889999999 99999999999999999999999999986431100  0      000          


Q ss_pred             -----------hhccccccC---------------CCCCCCCC------------CC-ccCC--CCCceecceeeEEeec
Q psy5293          85 -----------RVRALATQF---------------NNEPAQAS------------RP-FDKR--RDGFVMGEGSAILVLE  123 (359)
Q Consensus        85 -----------~~~~l~~~~---------------~~~~~~~~------------~~-fd~~--~~G~~~geGa~a~~l~  123 (359)
                                 ..|......               ..+|+...            ++ +++-  -+...+.||+++++|.
T Consensus       147 ~~al~a~~~~~~yG~t~e~~~~~~a~vav~~~~~A~~np~A~~r~~~t~e~v~~s~~v~~Pl~~~d~~~~~DGAaA~vl~  226 (398)
T PRK06157        147 NFAQLASAYAAKYGVSREDLKRAMAHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVT  226 (398)
T ss_pred             HHHHHHHHHHHHhCCCHHHHcccccHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCCchhccCCCCCccEEEEEe
Confidence                       000000000               00222111            11 1111  1223368999999999


Q ss_pred             chHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcc
Q psy5293         124 ELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAH  203 (359)
Q Consensus       124 ~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~  203 (359)
                      +.+.+.+.+.....+|++++..                                                      ++..
T Consensus       227 s~~~A~~l~~~~~v~I~g~~~~------------------------------------------------------~~~~  252 (398)
T PRK06157        227 TPEIARALGKKDPVYVKALQLA------------------------------------------------------VSNG  252 (398)
T ss_pred             cHHHHHhhCCCCCeEEEEEEEe------------------------------------------------------cccc
Confidence            9888877665334677776510                                                      0000


Q ss_pred             cccccCCCccCCCCCcChHHHHHHHHHHHHHcCCC--CCCccEEEeccCCCCcccHHHHHHHHhhcC-------------
Q psy5293         204 AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLS--PGDISYINAHATSTPLGDVIELKAIGSLFP-------------  268 (359)
Q Consensus       204 aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~--~~dI~~ie~h~~~t~~~d~~E~~al~~~~~-------------  268 (359)
                      ....    .....|... .....+++++++++||+  ++|||++|+|+.++. .....++.|+.+..             
T Consensus       253 ~~~~----~~~~~~~~~-~~~~~aa~~a~~~AGl~~~~~Did~~Ei~D~Fs~-~~l~~~e~lGl~~~Ge~~~~~~~g~~~  326 (398)
T PRK06157        253 WELQ----YNGWDGSYF-PTTRIAARKAYREAGITDPREELSMAEVHDCFSI-TELVTMEDLGLSERGQAWRDVLDGFFD  326 (398)
T ss_pred             cccc----ccccccccc-HHHHHHHHHHHHHcCCCCchhcCCEEEEecCChH-HHHHHHHHcCCCCCCchHHHHHCCCcc
Confidence            0000    001111111 12457899999999998  799999999999985 44666666654432             


Q ss_pred             -CCCceecccccc--cchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCc
Q psy5293         269 -AQRLMVSSTKGA--HGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGF  345 (359)
Q Consensus       269 -~~~~~v~~~k~~--~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  345 (359)
                       ++++||+...+.  .|||.+|+|+.+++++++||+                       +++.++|+++.+++++++.|.
T Consensus       327 ~~G~~pvN~~GG~la~Ghp~gatG~~~~~e~~~QLr-----------------------g~ag~rQv~~a~~~l~~~~gg  383 (398)
T PRK06157        327 ADGGLPCQIDGGLKCFGHPIGASGLRMLYEMYLQLL-----------------------GRAGERQLKNPRLALTHNLGG  383 (398)
T ss_pred             CCCCeeecCCCCcccCCCcccHhHHHHHHHHHHHhc-----------------------ccccCccCCCccEEEEeccCC
Confidence             345677655554  499999999999999999999                       777888888899999999873

>PRK06366 acetyl-CoA acetyltransferase; Provisional

Probab=99.82  E-value=6.9e-20  Score=176.74  Aligned_cols=234  Identities=21%  Similarity=0.211  Sum_probs=163.5

Q ss_pred             HHHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH-----H--H---H------HH
Q psy5293          24 PAGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS-----I--A---A------FC   84 (359)
Q Consensus        24 ~a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~-----~--~---~------~~   84 (359)
                      ++.+++..+|+..  |.++|+++| ||+.|+..|+++|++|++|++||+|+|++.....     .  .   .      +.
T Consensus        65 ~a~~~~~~~Gl~~~~p~~~v~~~caSg~~av~~Aa~~I~sG~~d~vla~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~  144 (388)
T PRK06366         65 PAGQAAYHAGLPFGVTKYTVNVVCASGMLAVESAAREIMLGERDLVIAGGMENMSNAPFLLPSDLRWGPKHLLHKNYKID  144 (388)
T ss_pred             HHHHHHHHCCCCCCCcceeeechhhHHHHHHHHHHHHHhcCCCCEEEEEeeEccccCcccccccccccccccccccchhh
Confidence            4677899999964  999999999 9999999999999999999999999998653110     0  0   0      00


Q ss_pred             h----hc-----------cccccC----------------------CCCCCC-CC-------------------------
Q psy5293          85 R----VR-----------ALATQF----------------------NNEPAQ-AS-------------------------  101 (359)
Q Consensus        85 ~----~~-----------~l~~~~----------------------~~~~~~-~~-------------------------  101 (359)
                      .    .+           ..+..+                      ..+|.. ..                         
T Consensus       145 ~~~~~~g~~~~~~~~~mal~A~~~~~~yGitrE~~a~vAv~s~~~A~~np~ag~~~~ei~p~~~~~~d~~~r~~t~e~~~  224 (388)
T PRK06366        145 DAMLVDGLIDAFYFEHMGVSAERTARKYGITREMADEYSVQSYERAIRATESGEFRNEIVPFNDLDRDEGIRKTTMEDLA  224 (388)
T ss_pred             hhhcccCccccccCccHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhhHhcCCcccccccccccccccCcccCCHHHHh
Confidence            0    00           000000                      001221 11                         


Q ss_pred             --CC-ccCC-----CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhccc
Q psy5293         102 --RP-FDKR-----RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRIL  173 (359)
Q Consensus       102 --~~-fd~~-----~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  173 (359)
                        ++ |++.     .+...+.||++++++.+.+.+.+.+.++.++|++++.                             
T Consensus       225 ~s~~v~~p~g~lt~~d~s~~sDGAaAvvl~See~A~~l~~~pv~~I~g~~~-----------------------------  275 (388)
T PRK06366        225 KLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIARITGYES-----------------------------  275 (388)
T ss_pred             hCCCccCCCCCEehhhcCCcccceeEEEEecHHHHHHcCCCcCEEEEEEEE-----------------------------
Confidence              00 1110     0112258999999999999998877777778888761                             


Q ss_pred             CCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCC
Q psy5293         174 PNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTP  253 (359)
Q Consensus       174 ~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~  253 (359)
                                                        ...     .|.........+++++|+++|++|+|||++|.|+.++.
T Consensus       276 ----------------------------------~~~-----~~~~~~~~~~~A~~~al~~Agl~~~DiDv~Ei~daFa~  316 (388)
T PRK06366        276 ----------------------------------ASL-----DPLDFVEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSI  316 (388)
T ss_pred             ----------------------------------Eec-----CHHHhcccHHHHHHHHHHHcCCCHHHcceeeccchhHH
Confidence                                              100     11111223468999999999999999999999999985


Q ss_pred             cccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccC
Q psy5293         254 LGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTD  333 (359)
Q Consensus       254 ~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (359)
                       .....+++|+.  +..++++++.-..+|||+||||+++++++++||+                       ++       
T Consensus       317 -~~l~~le~lgl--~g~~vN~~GG~la~GHP~GatG~~~~~~l~~qL~-----------------------~~-------  363 (388)
T PRK06366        317 -ASIIVRDQLKI--DNERFNVNGGAVAIGHPIGNSGSRIIVTLINALK-----------------------TR-------  363 (388)
T ss_pred             -HHHHHHHHhCC--CCCccCCCCchhhhCCCcCCCHHHHHHHHHHHHH-----------------------hc-------
Confidence             34555555532  2336666666666799999999999999999998                       21       


Q ss_pred             CccEEEEeCcCcCcceeeEEEeecC
Q psy5293         334 GRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       334 ~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      +.|+++.+...-||...++|||+.+
T Consensus       364 ~~~~g~~~~c~~gg~g~a~~~e~~~  388 (388)
T PRK06366        364 HMKTGLATLCHGGGGAHTLTLEMVE  388 (388)
T ss_pred             CCCeEEEEEecccChhhEEEEEecC
Confidence            2578999998889999999999863

>PRK06690 acetyl-CoA acetyltransferase; Provisional

Probab=99.82  E-value=3.7e-19  Score=169.17  Aligned_cols=233  Identities=19%  Similarity=0.225  Sum_probs=164.3

Q ss_pred             HHHHHHHHcCCC-c-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH--HHH-----H--hhcccc-
Q psy5293          24 PAGAISIDMDSK-V-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI--AAF-----C--RVRALA-   90 (359)
Q Consensus        24 ~a~~ia~~~g~~-g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~--~~~-----~--~~~~l~-   90 (359)
                      ++..++...|+. + |+++|+++| ||+.|+..|+++|++|++|++||+|+|+|......  ..+     .  .++..+ 
T Consensus        59 ~~r~~~~~~Gl~~~~p~~tV~~~CaSG~~Ai~~a~~~I~sG~~d~~l~gG~E~ms~~p~~~~~~~~~~~~~~~~~~~~a~  138 (361)
T PRK06690         59 VARLSALEAGLGLHIPGVTIDRQCGAGLEAIRTACHFIQGGAGKCYIAGGVESTSTSPFQNRARFSPETIGDPDMGVAAE  138 (361)
T ss_pred             HHHHHHHHcCCCCCCCceehhhhhhHHHHHHHHHHHHHHCCCCCEEEEeccccccCCCcccccccCcccccCccHHHHHH
Confidence            455688899997 4 999999999 99999999999999999999999999998643110  000     0  000000 


Q ss_pred             ---------ccC---------------CCCCC-------------CCC--------------CCccCC-----CCCceec
Q psy5293          91 ---------TQF---------------NNEPA-------------QAS--------------RPFDKR-----RDGFVMG  114 (359)
Q Consensus        91 ---------~~~---------------~~~~~-------------~~~--------------~~fd~~-----~~G~~~g  114 (359)
                               +..               .++|.             +..              ..|++.     .+...++
T Consensus       139 ~~~~~ygitre~~d~~A~~s~k~a~~a~~n~~~~~ei~~v~~~~d~~~r~~~~~e~ll~~l~p~~~~~g~lt~~~~~~~~  218 (361)
T PRK06690        139 YVAERYNITREMQDEYACLSYKRTLQALEKGYIHEEILSFNGLLDESIKKEMNYERIIKRTKPAFLHNGTVTAGNSCGVN  218 (361)
T ss_pred             HHHHHhCCCHHHHHHHHHHHHHHHHHHHHCCCCCCceecccCccccccCCCCCHHHHhhcCCCcccCCCceeccccCCCC
Confidence                     000               00111             000              112211     0112258


Q ss_pred             ceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCccc
Q psy5293         115 EGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCV  194 (359)
Q Consensus       115 eGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~  194 (359)
                      ||+++++|.+.+.+.+.+.++.++|++.+                                                   
T Consensus       219 DGAaAvvl~s~e~A~~lg~~p~~~i~~~~---------------------------------------------------  247 (361)
T PRK06690        219 DGACAVLVMEEGQARKLGYKPVLRFVRSA---------------------------------------------------  247 (361)
T ss_pred             CCeEEEEEecHHHHHHcCCCceEEEEEEE---------------------------------------------------
Confidence            99999999999999888888877777765                                                   


Q ss_pred             ccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcCCCCcee
Q psy5293         195 STACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMV  274 (359)
Q Consensus       195 ~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v  274 (359)
                                  ...     ..|..+..+...+++++|++++++++|||++|.|..++. ......+.++..  ..++++
T Consensus       248 ------------~~~-----~~~~~~~~~~~~a~~~al~~Agl~~~Did~~ei~eafa~-~~~~~~e~lgl~--~~~vn~  307 (361)
T PRK06690        248 ------------VVG-----VDPNLPGTGPIFAVNKLLNEMNMKVEDIDYFEINEAFAS-KVVACAKELQIP--YEKLNV  307 (361)
T ss_pred             ------------Eec-----cCcccchhHHHHHHHHHHHHcCCCHHHcCEeeecchhHH-HHHHHHHhcCCC--chhccc
Confidence                        100     111222356788999999999999999999999988774 223333333322  456778


Q ss_pred             cccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEE
Q psy5293         275 SSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCI  354 (359)
Q Consensus       275 ~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il  354 (359)
                      ++....+|||.|++|+++++++++||++                              .+.|+++.+...-||...++||
T Consensus       308 ~GG~la~Ghp~GatG~~~~~~~~~ql~~------------------------------~~~~~g~~~~c~~gG~g~a~~~  357 (361)
T PRK06690        308 NGGAIALGHPYGASGAMLVTRLFYQAKR------------------------------EDMKYGIATLGIGGGIGLALLF  357 (361)
T ss_pred             CCcHHhccCchhhhHHHHHHHHHHHHHH------------------------------hCCCEEEEEEcccCcceeEEEE
Confidence            8888888999999999999999999981                              1268899998888999999999


Q ss_pred             eec
Q psy5293         355 AEY  357 (359)
Q Consensus       355 ~~~  357 (359)
                      |+.
T Consensus       358 e~~  360 (361)
T PRK06690        358 EKV  360 (361)
T ss_pred             Eec
Confidence            985

>PRK06289 acetyl-CoA acetyltransferase; Provisional

Probab=99.82  E-value=4.3e-19  Score=172.33  Aligned_cols=245  Identities=18%  Similarity=0.178  Sum_probs=156.7

Q ss_pred             HcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh---------------------c
Q psy5293          31 DMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV---------------------R   87 (359)
Q Consensus        31 ~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~---------------------~   87 (359)
                      ..++.+ |.++|+++| ||+.||..|+.+|++|++|++||+|+|++............                     +
T Consensus        75 ~~~~~g~~~~~v~~~Casg~~al~~Aa~~I~sG~~~~VLvvg~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a  154 (403)
T PRK06289         75 HPALWGVPASRHEAACASGSVATLAAMADLRAGRYDVALVVGVELMKTVPGDVAAEHLGAAAWTGHEGQDARFPWPSMFA  154 (403)
T ss_pred             hhcCCCCceeecccccHHHHHHHHHHHHHHHcCCCCEEEEEEEEecCCCCchhhHHhhhcccccccccccCCCccHHHHH
Confidence            345555 899999999 99999999999999999999999999986543211000000                     0


Q ss_pred             cccccC----------------------CCCCCCCCC------CccCC--------------CCCceecceeeEEeecch
Q psy5293          88 ALATQF----------------------NNEPAQASR------PFDKR--------------RDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        88 ~l~~~~----------------------~~~~~~~~~------~fd~~--------------~~G~~~geGa~a~~l~~~  125 (359)
                      .....+                      ..+|....+      +.+.+              -+...+.||++++++.+.
T Consensus       155 l~a~~y~~~yG~t~e~la~va~~~~~~A~~NP~A~~~~~~~~~~~~~~d~~~s~~i~~Pl~~~d~~~~~DGAaA~vl~s~  234 (403)
T PRK06289        155 RVADEYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVVEGRLRRQDCSQVTDGGAGVVLASD  234 (403)
T ss_pred             HHHHHHHHHhCCCHHHHHHHHHHHHHHHccCcHhhcCccccccccchhhhhcCCcccCCCchhhcCCCCCceeEEEEEcH
Confidence            000000                      001211111      10000              011225788888888888


Q ss_pred             HHHHhcCC-cEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccc
Q psy5293         126 DHALARSA-NIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHA  204 (359)
Q Consensus       126 ~~a~~~g~-~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~a  204 (359)
                      +.+.+.+. ++..+|++++.                                                      +++...
T Consensus       235 e~a~~l~~~~~~~~i~g~~~------------------------------------------------------~~~~~~  260 (403)
T PRK06289        235 AYLRDYADARPIPRIKGWGH------------------------------------------------------RTAPLG  260 (403)
T ss_pred             HHHHHhccCCCCEEEEEEEE------------------------------------------------------eccccc
Confidence            77765554 44466776651                                                      111000


Q ss_pred             ccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--------------CC
Q psy5293         205 IGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--------------AQ  270 (359)
Q Consensus       205 ig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--------------~~  270 (359)
                      +....+ .....|... .....+++++|+++|++++|||++|+|+.++. .+...+++++.+..              ++
T Consensus       261 ~~~~~~-~~~~~~~~~-~~~~~aa~~a~~~Agi~~~Didv~el~D~fa~-~~l~~le~lGl~~~Ge~~~~v~~G~~~~~G  337 (403)
T PRK06289        261 LEQKLD-RSAGDPYVL-PHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTP-SEYLAIDHIGLTGPGESWKAIENGEIAIGG  337 (403)
T ss_pred             cccccc-ccccccccc-HHHHHHHHHHHHHcCCCHHHCeEEeeeccchH-HHHHHHHHcCCCCCCcHHHHHhcCCcccCC
Confidence            000000 000111111 23567999999999999999999999999995 55777788765532              45


Q ss_pred             Cceeccccccc--chHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcC-cCc
Q psy5293         271 RLMVSSTKGAH--GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFG-FGG  347 (359)
Q Consensus       271 ~~~v~~~k~~~--Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~gG  347 (359)
                      ++|||...+.+  |||.+|+|+.+++++++||+                       ++...+|+++.+.+++++.| .++
T Consensus       338 ~lpvN~~GG~la~Ghp~gatG~~~~~e~~~QLr-----------------------g~ag~~Qv~~~~~~l~~~~gg~~~  394 (403)
T PRK06289        338 RLPINPSGGLIGGGHPVGASGVRMLLDAAKQVT-----------------------GTAGDYQVEGAKTFGTLNIGGSTT  394 (403)
T ss_pred             CeeEcCCCCccccCCCccchHHHHHHHHHHHHh-----------------------ccccCccCCchheEEEEecCcccc
Confidence            67776666555  99999999999999999999                       66677788888899999987 444


Q ss_pred             ceeeEEEe
Q psy5293         348 TNACLCIA  355 (359)
Q Consensus       348 ~~~~~il~  355 (359)
                      .+.++|++
T Consensus       395 ~~~~~i~~  402 (403)
T PRK06289        395 TTVSFVVG  402 (403)
T ss_pred             eEEEEEEe
Confidence            55555553

>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine

Probab=99.82  E-value=5.2e-19  Score=170.87  Aligned_cols=239  Identities=24%  Similarity=0.326  Sum_probs=154.2

Q ss_pred             HHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH----------HHH-H-----------
Q psy5293          28 ISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS----------IAA-F-----------   83 (359)
Q Consensus        28 ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~----------~~~-~-----------   83 (359)
                      +...+|+.+ |+++|+++| ||+.|+..|+++|++|++|++||+|+|++.....          +.. +           
T Consensus        67 ~~~~lg~~~~p~~~V~~~Casg~~al~~A~~~I~sG~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~r~~~~~~a~  146 (393)
T cd00826          67 AMHAGGLQEAPAIGMNNLCGSGLRALALAMQLIAGGDANCILAGGFEKMETSAENNAKEKHIDVLINKYGMRACPDAFAL  146 (393)
T ss_pred             HHHcCCCCCCcEEEecchhHHHHHHHHHHHHHHHCCCCCEEEEEeeeccccCcccccccchhHHHHHHhCChhhccHHHH
Confidence            566778876 999999999 9999999999999999999999999998753210          000 0           


Q ss_pred             ---------Hhhccccc--------c------CCCCCCCCC------------CC-c---cC--CCCCceecceeeEEee
Q psy5293          84 ---------CRVRALAT--------Q------FNNEPAQAS------------RP-F---DK--RRDGFVMGEGSAILVL  122 (359)
Q Consensus        84 ---------~~~~~l~~--------~------~~~~~~~~~------------~~-f---d~--~~~G~~~geGa~a~~l  122 (359)
                               ...|....        .      ...+|....            ++ |   +.  .-+...+.||+++++|
T Consensus       147 ~s~~~~~~~~~~G~~~e~~a~v~~~~~~~~~~a~~np~a~~~~~~t~e~~~~~~~i~~~~~pl~~~~~~~~~DGAAA~vl  226 (393)
T cd00826         147 AGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDEASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAIL  226 (393)
T ss_pred             HHHHHHHHHHHcCCCHHHEEEEEEecCCCCEEEecCCCCCCCCCCCHHHHhcCCCccCCCCCEechhcCCcCCCeEEEEE
Confidence                     00011000        0      001122111            11 1   00  0111225799999999


Q ss_pred             cchHHHHhcCC--cEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCccccccccc
Q psy5293         123 EELDHALARSA--NIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACAT  200 (359)
Q Consensus       123 ~~~~~a~~~g~--~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAs  200 (359)
                      .+.+.+.+.+.  +. .+|.+.+..                                                      +
T Consensus       227 ~S~~~a~~l~l~~~~-v~i~~~a~~------------------------------------------------------~  251 (393)
T cd00826         227 MSEAEAQKHGLQSKA-REIQALEMI------------------------------------------------------T  251 (393)
T ss_pred             ecHHHHHHcCCcccc-cccceEEEE------------------------------------------------------E
Confidence            99988876552  11 223322200                                                      0


Q ss_pred             CcccccccCCCccCCCCC----cChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--------
Q psy5293         201 GAHAIGMSGDGHHLTSPR----EDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--------  268 (359)
Q Consensus       201 g~~aig~~~~~~~~~~p~----~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--------  268 (359)
                      +     .   ......|+    ....+...+++++|+++||+++|||++|+|+.++. .+...++.|+.+..        
T Consensus       252 ~-----~---~~~~~~~~~~~~~~~~~~~~A~~~al~~Agi~~~DID~~Ei~d~Fa~-~~l~~~e~lgl~~~g~~~~~~~  322 (393)
T cd00826         252 D-----M---ASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAA-NACATNEALGLCPEGQGGALVD  322 (393)
T ss_pred             e-----e---eccccCccccccccceeHHHHHHHHHHHcCCCHHHcCeeehhhhhHH-HHHHHHHHhCCCcccchhhhhh
Confidence            0     0   00001111    12245578999999999999999999999999884 44556666654431        


Q ss_pred             ------CCCceecccccc--cchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEE
Q psy5293         269 ------AQRLMVSSTKGA--HGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALK  340 (359)
Q Consensus       269 ------~~~~~v~~~k~~--~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (359)
                            ++++|||...+.  .|||.||||+.+++++++||+                       +++.++|+.+.+++++
T Consensus       323 ~g~~~~~G~~pvN~~GG~la~GhP~gAtG~~~~~e~~~qL~-----------------------g~ag~~q~~~~~~~~~  379 (393)
T cd00826         323 RGDNTYGGKSIINPNGGAIAIGHPIGASGAAICAELCFELK-----------------------GEAGKRQGAGAGLALL  379 (393)
T ss_pred             cCccccCCcceECCCCchhhcCCCccccHHHHHHHHHHHHh-----------------------hhhccccCCCcCEEEE
Confidence                  234666555554  499999999999999999999                       6777777777889999


Q ss_pred             eCcCcCcceeeEEEe
Q psy5293         341 NSFGFGGTNACLCIA  355 (359)
Q Consensus       341 ~~~g~gG~~~~~il~  355 (359)
                      ++.|  |...++|||
T Consensus       380 ~~~G--g~g~a~~~~  392 (393)
T cd00826         380 CIGG--GGGAAMCIE  392 (393)
T ss_pred             EcCC--CceeEEEEe
Confidence            8877  446667775

There are 2 functional different classes: thiolase-I (3-ketoacyl-CoA thiolase) and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I can cleave longer fatty acid molecules and plays an important role in the beta-oxidative degradation of fatty acids. Thiolase-II has a high substrate specificity. Although it can cleave acetoacyl-CoA, its main function is the synthesis of acetoacyl-CoA from two molecules of acetyl-CoA, which gives it importance in several biosynthetic pathways.

>PRK06066 acetyl-CoA acetyltransferase; Provisional

Probab=99.82  E-value=6.4e-19  Score=168.94  Aligned_cols=238  Identities=16%  Similarity=0.109  Sum_probs=158.6

Q ss_pred             HHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH------------------------
Q psy5293          26 GAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS------------------------   79 (359)
Q Consensus        26 ~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~------------------------   79 (359)
                      ..++..+|+.+ |.+.+   | ||..++..|+.+|++|.+|+|||.|+|++.+...                        
T Consensus        68 ~~~~~~lg~~~~~~~~v---~~sg~~a~~~A~~aV~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~p~g~~~p~~  144 (385)
T PRK06066         68 EFAPDQIGGAMRPTMTV---AGDGLQGLAHAVMHINSGLANVVVVEAHSKPSDILTFSDVVKFAMDPIYVRPIGPPNPHF  144 (385)
T ss_pred             hhHHHHcccCCCCeEEE---eCcHHHHHHHHHHHHHcCCCCEEEEEEEeeccCccchhhhhhcccCcceecccCCCcHHH
Confidence            34667899864 87776   9 9999999999999999999999999997543100                        


Q ss_pred             HHHHHhhccccc-----------------cCCCCCCCCC-CCccC--------------CCCCceecceeeEEeecchHH
Q psy5293          80 IAAFCRVRALAT-----------------QFNNEPAQAS-RPFDK--------------RRDGFVMGEGSAILVLEELDH  127 (359)
Q Consensus        80 ~~~~~~~~~l~~-----------------~~~~~~~~~~-~~fd~--------------~~~G~~~geGa~a~~l~~~~~  127 (359)
                      +..+...+.+..                 +...+|.... ++.+.              .-+...+.||+++++|.+.+.
T Consensus       145 ~~al~a~rym~~yG~t~E~lA~Vavk~r~nA~~NP~A~~r~~~t~edvl~S~~ia~Pl~~~d~~~~~DGAaAvvl~s~~~  224 (385)
T PRK06066        145 IAGLDAVKFMSRKGITREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTELDIAPFVDGAIVVVLASEEV  224 (385)
T ss_pred             HHHHHHHHHHHHHCcCHHHHHHHHHHHHHHHhcCChhhcCCCCCHHHHhcCCcccCCchhhccCCCCCceEEEEEeCHHH
Confidence            000000000000                 0001222111 11110              012234789999999999988


Q ss_pred             HHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         128 ALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       128 a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +.+.+.++. +|.+++.                                                               
T Consensus       225 a~~l~~~pv-~I~g~g~---------------------------------------------------------------  240 (385)
T PRK06066        225 AKKLTDDPV-WIKGIGW---------------------------------------------------------------  240 (385)
T ss_pred             HHhcCCCCE-EEEEEEE---------------------------------------------------------------
Confidence            887666664 7776651                                                               


Q ss_pred             cCCCccCCCCC-c-ChHHHHHHHHHHHHHcCCC--CCCccEEEeccCCCCcccHHHHHHHHhhcC--------------C
Q psy5293         208 SGDGHHLTSPR-E-DGRGALLAMTRALIDANLS--PGDISYINAHATSTPLGDVIELKAIGSLFP--------------A  269 (359)
Q Consensus       208 ~~~~~~~~~p~-~-~~~~~~~a~~~al~~agl~--~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--------------~  269 (359)
                      ..+... ..+. + .......+++++++++|++  ++|||++|.|+.++. .....++.|+.+..              +
T Consensus       241 ~~~~~~-~~~~~~~~~~~~~~Aa~~a~~~AGi~~p~~DiD~~ei~D~Ft~-~~l~~~e~lG~~~~Ge~~~~v~~G~~~~~  318 (385)
T PRK06066        241 STESSN-LETAELGKANYMRIAADMAYKMAGIESPRKEVDAAEVDDRYSY-KELQHIEALRLSEEPEKDSLLREGNFDPQ  318 (385)
T ss_pred             ecCCcc-cccccccccHHHHHHHHHHHHHcCCCCCHHHCcEEEEecCChH-HHHHHHHHcCCCCCCchHHHHHCCCCCCC
Confidence            000000 0000 0 0122346899999999998  799999999999995 44667777755432              3


Q ss_pred             CCceeccccccc--chHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcC--c
Q psy5293         270 QRLMVSSTKGAH--GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFG--F  345 (359)
Q Consensus       270 ~~~~v~~~k~~~--Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~  345 (359)
                      +++|||...+.+  |||.+|+|+.+++++++||+                       +++..+| ++.+++++++.|  .
T Consensus       319 G~~PvN~~GG~la~Ghp~gatG~~~v~e~~~QL~-----------------------g~Ag~rQ-~~a~~~l~~~~gg~~  374 (385)
T PRK06066        319 GELPVNPSGGHLAKGVPLEASGLSLLLDAVEYLR-----------------------GEAGARQ-GKAERAVVASWRGIP  374 (385)
T ss_pred             CCccccCCCchhcCCCccchhHHHHHHHHHHHHc-----------------------ccccccC-CCCcEEEEcCCCccC
Confidence            456776555554  99999999999999999999                       7777778 789999999987  5


Q ss_pred             CcceeeEEEee
Q psy5293         346 GGTNACLCIAE  356 (359)
Q Consensus       346 gG~~~~~il~~  356 (359)
                      ++..+.+|+|+
T Consensus       375 ~~~~~v~v~~~  385 (385)
T PRK06066        375 TLTGSVVVVER  385 (385)
T ss_pred             CccEEEEEEeC
Confidence            67778888875

>PRK06504 acetyl-CoA acetyltransferase; Provisional

Probab=99.81  E-value=4.7e-19  Score=170.55  Aligned_cols=103  Identities=27%  Similarity=0.304  Sum_probs=84.6

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHh
Q psy5293         222 RGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVH  301 (359)
Q Consensus       222 ~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~  301 (359)
                      .+...+++++|+++|++|+|||++|+|+.++. .....++.|+.+  ..++++++....+|||.||+|++++.+++++|+
T Consensus       288 ~~~~~a~~~a~~~agl~~~Did~~Ei~d~Fa~-~~l~~~e~lG~~--~~pvN~~GG~la~Ghp~gatG~r~~~~l~~~lr  364 (390)
T PRK06504        288 EAPLPATERALKKAGMKIDDIDLYEVNEAFAS-VPLAWLKATGAD--PERLNVNGGAIALGHPLGASGTKLMTTLVHALK  364 (390)
T ss_pred             ccHHHHHHHHHHHcCCCHHHCCEEEecccchH-HHHHHHHHhCCC--CCCcCCCCcHHhcCCCcchhHHHHHHHHHHHHH
Confidence            45567999999999999999999999999985 345555555543  447788888888899999999999999999998


Q ss_pred             cCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         302 EGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       302 ~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      +                       .       +.++++.++.+.||...++||+++
T Consensus       365 ~-----------------------~-------~~~~gl~~~~~ggg~g~a~ile~~  390 (390)
T PRK06504        365 Q-----------------------R-------GKRYGLQTMCEGGGMANVTIVERL  390 (390)
T ss_pred             h-----------------------h-------CCCeEEEEEeecccceeEEEEEeC
Confidence            2                       1       257899998887899999999863

>PRK07801 acetyl-CoA acetyltransferase; Provisional

Probab=99.81  E-value=3.9e-19  Score=171.45  Aligned_cols=231  Identities=20%  Similarity=0.203  Sum_probs=157.7

Q ss_pred             HHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCC-HHHH---HH--------------H
Q psy5293          25 AGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCIS-QLSI---AA--------------F   83 (359)
Q Consensus        25 a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~~~---~~--------------~   83 (359)
                      +..+....|+  ..|.++|+++| ||+.|+..|+++|++|++|++||+|+|++.. +...   ..              +
T Consensus        67 ~~~~~l~~gl~~~~p~~~v~~acaSg~~Av~~Aa~~I~sG~~d~vLv~G~e~ms~~~~~~~~~~~~~~~~~~~~~~~~~~  146 (382)
T PRK07801         67 ARTSWLAAGLPEEVPGVTVDRQCGSSQQAIHFAAQAVMSGTQDLVVAGGVQNMSQIPISSAMTAGEQLGFTSPFAESKGW  146 (382)
T ss_pred             HHHHHHHcCCCCCCceeeecchhhhHHHHHHHHHHHHHCCCCCEEEEcchhhhcCCcccccccccccccCCcccccCcch
Confidence            3344445565  46999999999 9999999999999999999999999997643 2100   00              0


Q ss_pred             -Hhhccc-------cc----cCC------------------CCCCC-C---------------------------CCCcc
Q psy5293          84 -CRVRAL-------AT----QFN------------------NEPAQ-A---------------------------SRPFD  105 (359)
Q Consensus        84 -~~~~~l-------~~----~~~------------------~~~~~-~---------------------------~~~fd  105 (359)
                       ...+..       +.    .+.                  .+|.. .                           .+|..
T Consensus       147 ~~~~g~~~~~~~~~a~~~~~~yG~tre~~a~vav~~~~~a~~n~~ag~~~~~~~p~~~~~~d~~~~~~t~e~~~~~~~i~  226 (382)
T PRK07801        147 LHRYGDQEVSQFRGAELIAEKWGISREEMERFALESHRRAFAAIRAGRFDNEIVPVGGVTVDEGPRETSLEKMAGLKPLV  226 (382)
T ss_pred             hhhccCCCCCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCCccccccccCccccCCcCcCCHHHHhcCCCCC
Confidence             000000       00    000                  00000 0                           01110


Q ss_pred             C-----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhh
Q psy5293         106 K-----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQ  180 (359)
Q Consensus       106 ~-----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~  180 (359)
                      .     ..+...++||++++++.+.+.+.+.+.+++++|.+++                                     
T Consensus       227 ~~~pl~~~d~~~~~DGaaa~il~s~e~a~~~~~~~~~~i~~~~-------------------------------------  269 (382)
T PRK07801        227 EGGRLTAAVASQISDGASAVLLASERAVKRHGLTPRARIHHLS-------------------------------------  269 (382)
T ss_pred             CCCCcccccCCCCCCceEEEEEecHHHHHHCCCCccEEEEEEE-------------------------------------
Confidence            0     1122236799999999999988887877777877754                                     


Q ss_pred             hHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHH
Q psy5293         181 ISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIEL  260 (359)
Q Consensus       181 ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~  260 (359)
                                                ...+...     ....+...+++++|+++|++|+|||++|+|+.++. .+...+
T Consensus       270 --------------------------~~~~~~~-----~~~~~~~~a~~~a~~~agi~~~did~~e~~d~Fa~-~~~~~~  317 (382)
T PRK07801        270 --------------------------VRGDDPV-----FMLTAPIPATRYALEKTGLSIDDIDVVEINEAFAP-VVLAWL  317 (382)
T ss_pred             --------------------------EecCChH-----hhccChHHHHHHHHHHcCCCHHHcCEeeecccchH-HHHHHH
Confidence                                      1110000     01123357899999999999999999999999984 445555


Q ss_pred             HHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEE
Q psy5293         261 KAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALK  340 (359)
Q Consensus       261 ~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (359)
                      +.|+.+  ..+++.++....+|||.+|||+++++++++||+.                              .+.|+++.
T Consensus       318 e~lG~~--~~pvN~~GG~l~~Ghp~gasG~~~~~e~~~qL~~------------------------------~~~~~gl~  365 (382)
T PRK07801        318 KETGAD--PAKVNPNGGAIALGHPLGATGAKLMTTLLHELER------------------------------TGGRYGLQ  365 (382)
T ss_pred             HHhCCC--chhcCCCcchhhhcCcHHHHHHHHHHHHHHHHHh------------------------------cCCCEEEE
Confidence            555533  4578888888888999999999999999999982                              12678999


Q ss_pred             eCcCcCcceeeEEEee
Q psy5293         341 NSFGFGGTNACLCIAE  356 (359)
Q Consensus       341 ~~~g~gG~~~~~il~~  356 (359)
                      ++.|.||+..++||++
T Consensus       366 ~~~gggg~~~~~vl~~  381 (382)
T PRK07801        366 TMCEGGGTANVTIIER  381 (382)
T ss_pred             EEcccccceeEEEEEe
Confidence            9998889999999986

>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2

Probab=99.80  E-value=1.5e-19  Score=164.87  Aligned_cols=114  Identities=39%  Similarity=0.655  Sum_probs=97.7

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..+.|+.+..+++|. ++++|++.||++||+++|+++| ||+.||..|+++|++|++|++||||+|..+++..+..+..+
T Consensus       140 ~~~~~~~~~~~~~~~-~a~~ia~~~gl~G~~~tv~~acaSgl~Al~~A~~~I~~G~~d~~lvgg~d~~~~~~~~~~~~~~  218 (254)
T PF00109_consen  140 RDVSPWFVPNTLPNS-AAGRIAILFGLRGPSYTVSTACASGLAALEAAYRAIRSGEADVALVGGVDAPLSPFILAGFSAL  218 (254)
T ss_dssp             GGSHTTHHHHHSTTH-HHHHHHHHHTB-SSEEEEE-GGGHHHHHHHHHHHHHHTTSSSEEEEEEEE--SSHHHHHHHHHT
T ss_pred             ccccccccCcccccc-cccchhhhcCCCCccccccccccccccccchhcccccccccccccccccccccccccccccccc
Confidence            556775666679999 9999999999999999999999 99999999999999999999999999988999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHH
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA  128 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a  128 (359)
                      +.++      +++.++||+..++|+++|||+++++|++.++|
T Consensus       219 ~~~s------~~~~~~pf~~~~~G~v~gEGa~~~vLe~~~~A  254 (254)
T PF00109_consen  219 GALS------ADGPCRPFDPFADGFVLGEGAGALVLERLEHA  254 (254)
T ss_dssp             TBB-------TTSGGGSTBTTB-SB-BB-EEEEEEEEEHHHH
T ss_pred             cccc------ccccccccCCCCCCEEEECceEEEEEEEhhhC
Confidence            9887      33679999999999999999999999998765

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....

>PRK08170 acetyl-CoA acetyltransferase; Provisional

Probab=99.79  E-value=2.4e-18  Score=167.91  Aligned_cols=235  Identities=19%  Similarity=0.185  Sum_probs=158.8

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH--------H-H----------
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS--------I-A----------   81 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~--------~-~----------   81 (359)
                      ++..++..+|+.  .|.++|+++| ||+.|+..|+++|++|.+|++||+|+|++.....        . .          
T Consensus        66 ~a~~v~~~lGl~~~~p~~~v~~~CaSg~~al~~A~~~I~sG~~d~vLv~G~E~ms~~~~~~~~~~~~~~~~~~~~~~~~~  145 (426)
T PRK08170         66 IARVVALRLGCGEKVPAWTVQRNCASGMQALDSAAANIALGRADLVLAGGVEAMSHAPLLFSEKMVRWLAGWYAAKSIGQ  145 (426)
T ss_pred             HHHHHHHHhCcCCCceeeeccchhhHHHHHHHHHHHHHHCCCCCEEEEEEEecccCCccccccccccchhccccccccCc
Confidence            477889999994  4999999999 9999999999999999999999999997653110        0 0          


Q ss_pred             ---------H-HHh------hcccccc---C----------------------------C--C-----------------
Q psy5293          82 ---------A-FCR------VRALATQ---F----------------------------N--N-----------------   95 (359)
Q Consensus        82 ---------~-~~~------~~~l~~~---~----------------------------~--~-----------------   95 (359)
                               . +..      .+.....   .                            +  .                 
T Consensus       146 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~a~~a~~~~~~ygitre~~a~vav~s~~~a~~A~~~g~~~~i~pv~~~~  225 (426)
T PRK08170        146 KLAALGKLRPSYLAPVIGLLRGLTDPVVGLNMGQTAEVLAHRFGITREQMDAYAARSHQRLAAAQAEGRLKEVVPLFDRD  225 (426)
T ss_pred             cccccccccccccccccccCccccccccCcCHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcceEeeeecCC
Confidence                     0 000      0000000   0                            0  0                 


Q ss_pred             -CCC-------C--------CCCC-cc-CC-----CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhh
Q psy5293          96 -EPA-------Q--------ASRP-FD-KR-----RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLS  152 (359)
Q Consensus        96 -~~~-------~--------~~~~-fd-~~-----~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~  152 (359)
                       +|.       .        ..+| |+ +.     .+...++||+++++|.+.+.+.+.+.++.++++++.         
T Consensus       226 ~np~a~de~~r~~~t~e~~~~~~~v~~~p~~~lt~~~~s~~~DGAaA~vl~s~e~A~~~~~~p~~~i~~~~---------  296 (426)
T PRK08170        226 GKFYDHDDGVRPDSSMEKLAKLKPFFDRPYGRVTAGNSSQITDGACWLLLASEEAVKKYGLPPLGRIVDSQ---------  296 (426)
T ss_pred             CCeeccCCCCCCCCCHHHHhcCCCcccCCCCCEeccccCCCCCceEEEEEecHHHHHHCCCCceEEEEEee---------
Confidence             000       0        0011 21 10     122336899999999999999888878777777764         


Q ss_pred             hhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHH
Q psy5293         153 SNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRAL  232 (359)
Q Consensus       153 ~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al  232 (359)
                                                                            ..     ...|.....+..++++++|
T Consensus       297 ------------------------------------------------------~~-----~~~~~~~~~~~~~a~~~al  317 (426)
T PRK08170        297 ------------------------------------------------------WA-----ALDPSQMGLGPVHAATPLL  317 (426)
T ss_pred             ------------------------------------------------------Ee-----eeCchhhcccHHHHHHHHH
Confidence                                                                  10     0112223345678999999


Q ss_pred             HHcCCCCCCccEEEeccCCCCcccHHHHH---HHHhhcC------------CCCceecccccccchHHHhHHHHHHHHHH
Q psy5293         233 IDANLSPGDISYINAHATSTPLGDVIELK---AIGSLFP------------AQRLMVSSTKGAHGHLLGAAGNLESAFTI  297 (359)
Q Consensus       233 ~~agl~~~dI~~ie~h~~~t~~~d~~E~~---al~~~~~------------~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~  297 (359)
                      +++|++|+|||++|+|+.++. .....++   .++.+..            ..+++.++.....|||.||||++++++++
T Consensus       318 ~~aGl~~~did~~ei~daFa~-~~l~~l~~le~lGf~~~G~g~~~~~G~~~~~pvN~~GG~la~GHP~GAtG~~~~~~l~  396 (426)
T PRK08170        318 QRHGLTLEDLDLWEINEAFAA-QVLACLAAWADEEYCREQLGLDGALGELDRERLNVDGGAIALGHPVGASGARIVLHLL  396 (426)
T ss_pred             HHcCCCHHHcCEEEecchhHH-HHHHHHHHhccccchhcccccccccCCCCcceecCCCCHHHhCCCccCccHHHHHHHH
Confidence            999999999999999999884 2232223   3322211            12344444444459999999999999999


Q ss_pred             HHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         298 LAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       298 ~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      ++|++                           .   +.|+++++...-||...++|||+.
T Consensus       397 ~~l~~---------------------------~---~~~~g~~~~c~~gg~g~a~~~e~~  426 (426)
T PRK08170        397 HALKR---------------------------R---GTKRGIAAICIGGGQGGAMLLERV  426 (426)
T ss_pred             HHHHh---------------------------h---CCCeEEEEEecCCChhheEEEEeC
Confidence            99982                           1   157899999999999999999974

>TIGR02446 FadI fatty oxidation complex, beta subunit FadI

Probab=99.79  E-value=2.5e-18  Score=167.45  Aligned_cols=101  Identities=19%  Similarity=0.194  Sum_probs=72.9

Q ss_pred             HHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHH---h------hcC-CC-----CceecccccccchHHHhHH
Q psy5293         225 LLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG---S------LFP-AQ-----RLMVSSTKGAHGHLLGAAG  289 (359)
Q Consensus       225 ~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~---~------~~~-~~-----~~~v~~~k~~~Gh~~~AsG  289 (359)
                      ..+++++|+++|++++|||++|+|+.++. .+...+++|+   .      .+. .+     ++++++.-...|||.||+|
T Consensus       314 ~~a~~~al~~Agl~~~Did~~Ei~daFa~-~~l~~~e~lg~~~~~~~~~g~~~~~G~~~~~pvN~~GG~la~GhP~gatG  392 (430)
T TIGR02446       314 SYATPLALQRAGLALSDLTLIDMHEAFAA-QTLANVQMFASDKFAQENLGRSKAMGEIDMSKFNVLGGSIAYGHPFAATG  392 (430)
T ss_pred             HHHHHHHHHHcCCCHHHCCEEEeccccHH-HHHHHHHHhcCcchhhhcccccccCCCCCCCccCCCCCHHhcCCCccccH
Confidence            57899999999999999999999999985 4455666663   0      000 12     3444444445599999999


Q ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         290 NLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       290 ~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                      +.+++++++||+                       ++..       ++++......||...++|+|+
T Consensus       393 ~~~v~e~~~qL~-----------------------g~ag-------~~g~~~~~~~GG~g~a~iie~  429 (430)
T TIGR02446       393 ARMITQTLRELK-----------------------RRGG-------GLGLNTACAAGGLGAAMILEV  429 (430)
T ss_pred             HHHHHHHHHHHh-----------------------hcCC-------CccEEEEEecCcceEEEEEEe
Confidence            999999999998                       3332       233445555667778888875

This subunit of the FadJI complex has acetyl-CoA C-acyltransferase (EC 2.3.1.16) activity, and is also known as beta-ketothiolase and fatty oxidation complex, beta subunit, and YfcY. This protein is almost always located adjacent to FadJ (TIGR02440). The FadJI complex is needed for anaerobic beta-oxidation of short-chain fatty acids in E. coli.

>PRK09268 acetyl-CoA acetyltransferase; Provisional

Probab=99.77  E-value=1.2e-17  Score=162.57  Aligned_cols=103  Identities=17%  Similarity=0.167  Sum_probs=79.3

Q ss_pred             HHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHH---HHHHhhcC----------CCCceecccccc--cchHHHh
Q psy5293         223 GALLAMTRALIDANLSPGDISYINAHATSTPLGDVIEL---KAIGSLFP----------AQRLMVSSTKGA--HGHLLGA  287 (359)
Q Consensus       223 ~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~---~al~~~~~----------~~~~~v~~~k~~--~Gh~~~A  287 (359)
                      ....+++++|+++|++++|||++|+|+.++. ....++   ++++.+..          ...+||+...+.  +|||.+|
T Consensus       310 ~~~~a~~~a~~~AGl~~~Did~~Ei~d~Fa~-~~l~~l~~~e~lG~~~~g~g~~~~~G~~~~~pvN~~GG~la~GhP~gA  388 (427)
T PRK09268        310 APAYAVPRLLARNGLTLQDFDFYEIHEAFAS-QVLATLKAWEDEEYCRERLGLDAPLGSIDRSKLNVNGSSLAAGHPFAA  388 (427)
T ss_pred             cHHHHHHHHHHHcCCCHHHCCEEEeccccHH-HHHHHHHHhhhccccccccccccccCcCCCcccCCCcCHHhcCCCccc
Confidence            4467999999999999999999999999985 223344   54444321          113455554444  4999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         288 AGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       288 sG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                      ||+.+++++++||+                       ++       +.++++++...-||...++|||+
T Consensus       389 TG~~~v~e~~~QL~-----------------------~~-------~~~~gl~~~c~~gG~g~a~~~e~  427 (427)
T PRK09268        389 TGGRIVATLAKLLA-----------------------EK-------GSGRGLISICAAGGQGVTAILER  427 (427)
T ss_pred             chHHHHHHHHHHHH-----------------------hc-------CCCEEEEEEcccCchheEEEEeC
Confidence            99999999999998                       22       25789999999999999999985

>KOG1390|consensus

Probab=99.76  E-value=2e-18  Score=154.48  Aligned_cols=202  Identities=25%  Similarity=0.328  Sum_probs=143.3

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhcc------------
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRA------------   88 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~------------   88 (359)
                      ++.|++.--|+.  .|++||+.-| ||+.|+.+|.+.|+.|..|++++||.|+|+....++. .+.+.            
T Consensus        69 paRQaalgAGlp~sv~~tTvNkvCaSgmKAv~laaQsI~~G~~divVaGGmEsMS~vP~~~~-~R~g~~~G~~~l~Dgi~  147 (396)
T KOG1390|consen   69 PARQAALGAGLPYSVPATTVNKVCASGMKAVILAAQSIQTGHADIVVAGGMESMSNVPYLYV-ARGGVKYGGVQLVDGIV  147 (396)
T ss_pred             hHHHHHhhcCCCcceeeEeehhhhhhhHHHHHHHHHHHhcCCccEEEecccchhccCcchhh-hccCcCcCCeeeeechh
Confidence            788888888884  5999999999 9999999999999999999999999999987652221 11000            


Q ss_pred             ---ccccCCCC-----------------------------------------------------------CCC-------
Q psy5293          89 ---LATQFNNE-----------------------------------------------------------PAQ-------   99 (359)
Q Consensus        89 ---l~~~~~~~-----------------------------------------------------------~~~-------   99 (359)
                         |.+.++.-                                                           .|+       
T Consensus       148 ~DGL~D~y~~~~MG~~aE~~a~~~~ItRe~QD~yAI~Sy~r~~~Aq~~g~f~~EIVPV~V~~~rg~~~v~~DEe~~k~~~  227 (396)
T KOG1390|consen  148 KDGLTDAYDKCHMGICAENTAKKYQITREEQDAYAIESYKRSENAQKAGKFDKEIVPVEVKTKRGETVVKKDEEPKKGSN  227 (396)
T ss_pred             hcchHHHhccCCcchhHhhhHHHhCCcHhhhhhHHHHhHHHHHHHHhcCCCCCceeeEEEecCCCcEEeccchhhhcccc
Confidence               00000000                                                           000       


Q ss_pred             -----CCCCccCCCCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293         100 -----ASRPFDKRRDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus       100 -----~~~~fd~~~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                           ..++......|.+       +-||+++++|.+.+.+.+.|.+++++|++++..                      
T Consensus       228 ~~~~~~l~~vF~~~ggTVTaaNAS~lnDGAAAvvL~s~e~~~~~glkPLArIv~~~dA----------------------  285 (396)
T KOG1390|consen  228 IEKLSKLRPVFKEDGGTVTAANASTLNDGAAAVVLMSGEAAKELGLKPLARIVAWGDA----------------------  285 (396)
T ss_pred             hhhhccccceeecCCCeeccccccccCccceeeEEechhhHhHcCCchHHHHhhhhhh----------------------
Confidence                 0022112222322       678999999999999999999999999988610                      


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA  247 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~  247 (359)
                                                                 +   ..|....-.+..++.++|+++|+..+|||++| 
T Consensus       286 -------------------------------------------a---~~P~df~iaP~laipk~lk~aG~~~sdVd~~E-  318 (396)
T KOG1390|consen  286 -------------------------------------------A---TEPIDFTIAPALAIPKALKKAGLEQSDVDYWE-  318 (396)
T ss_pred             -------------------------------------------c---cChhhcccchHHHHHHHHHHcCcchhhhhHHh-
Confidence                                                       0   11111123457889999999999999999999 


Q ss_pred             ccCCCCcccHHHHHHHHh--hcC--CCCceecccccccchHHHhHHHHHHHHHHHHHh
Q psy5293         248 HATSTPLGDVIELKAIGS--LFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVH  301 (359)
Q Consensus       248 h~~~t~~~d~~E~~al~~--~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~  301 (359)
                            .+|.+..-.|..  .++  ..++++.+..-.+|||+|+||.+.++.+++.|+
T Consensus       319 ------iNEAFs~v~lA~iK~LgldP~kVNv~GGAValGHPlG~SGaRi~~tL~~~L~  370 (396)
T KOG1390|consen  319 ------INEAFSVVVLANIKKLGLDPSKVNVHGGAVALGHPLGMSGARILVTLLHTLE  370 (396)
T ss_pred             ------hhhhhhHHHHHHHHHhCCCHhhccCCCceeecCCCcCCcchhHHHHHHHHHH
Confidence                  344443333322  223  456888888889999999999999999999998

>KOG1389|consensus

Probab=99.68  E-value=1.1e-16  Score=142.87  Aligned_cols=203  Identities=21%  Similarity=0.284  Sum_probs=142.6

Q ss_pred             HHHH-HHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHH--HHHH--------H-------
Q psy5293          25 AGAI-SIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQL--SIAA--------F-------   83 (359)
Q Consensus        25 a~~i-a~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~--~~~~--------~-------   83 (359)
                      ..++ +..-|+  +.|..+|+..| |||+|+..-...|++|.+|+-|.+|+|+|....  .+..        +       
T Consensus       100 e~R~a~~~ag~P~tvpv~tvNRqCsSGLqaVadiA~~Ir~G~ydIGla~GvESMt~~~~~g~~g~~~~~~~~~~~A~dCl  179 (435)
T KOG1389|consen  100 ECRMAAFYAGFPETVPVRTVNRQCSSGLQAVADIAAKIRAGFYDIGLAAGVESMTTNYPRGWPGSINPRLQKFEKARDCL  179 (435)
T ss_pred             HHHHHHHHcCCCcccchhhhhhhhhhHHHHHHHHHHHHhcCceeeecccchhhhcccCCCCCccccChhhhhhhHHhhcc
Confidence            4444 445666  45999999999 999999999999999999999999999987652  0000        0       


Q ss_pred             Hhhccccc-------------------------------cCCC----------CCCCCC-----------C---------
Q psy5293          84 CRVRALAT-------------------------------QFNN----------EPAQAS-----------R---------  102 (359)
Q Consensus        84 ~~~~~l~~-------------------------------~~~~----------~~~~~~-----------~---------  102 (359)
                      -.+|..+.                               .+.+          +|.+..           |         
T Consensus       180 lpmGitsEnva~rfgvsR~eqD~~Av~S~kkAa~A~~~G~f~dEIiPv~tkv~D~~g~~k~i~v~~DeGiRp~ttl~~l~  259 (435)
T KOG1389|consen  180 LPMGITSENVAERFGVSREEQDEAAVDSHKKAAAATAKGKFKDEIIPVKTKVVDPKGDEKPITVSVDEGIRPNTTLESLA  259 (435)
T ss_pred             cccccchHHHHHHhCCChhhhhHHHHHHHHHHHHHhhcCcchhheeeeeeeccCCcCCccceeEecCCCCCCCcchhHHh
Confidence            00111100                               0000          111111           1         


Q ss_pred             ---C-ccCCC-----CCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhccc
Q psy5293         103 ---P-FDKRR-----DGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRIL  173 (359)
Q Consensus       103 ---~-fd~~~-----~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  173 (359)
                         | |..+.     +.--.++|+++++|.+...|.+.|..++++++.+.                              
T Consensus       260 klkpvFkkdGttTagNsSQvSDGa~aVLLmkRs~A~qlgLPvlgvfr~f~------------------------------  309 (435)
T KOG1389|consen  260 KLKPVFKKDGTTTAGNSSQVSDGAGAVLLMKRSVAMQLGLPVLGVFRDFA------------------------------  309 (435)
T ss_pred             hcchhhhcCCccccCchhhcccchhhhhhhhhhhHhhcCCceeEEeeeee------------------------------
Confidence               1 22211     11227899999999999999999999999887654                              


Q ss_pred             CCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCC
Q psy5293         174 PNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTP  253 (359)
Q Consensus       174 ~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~  253 (359)
                                                            .-.+.|..++.++..++-.+++.+|+..+|||++|       
T Consensus       310 --------------------------------------~vGv~P~iMGiGPavAIp~alk~aGL~v~did~FE-------  344 (435)
T KOG1389|consen  310 --------------------------------------AVGVPPAIMGIGPAVAIPKALKAAGLEVDDIDLFE-------  344 (435)
T ss_pred             --------------------------------------eecCCHHHcCCCchhhhHHHHHHcCCcccccceee-------
Confidence                                                  22345667778889999999999999999999999       


Q ss_pred             cccHHHHHHHHhhcC----CCCceecccccccchHHHhHHHHHHHHHHHHHhc
Q psy5293         254 LGDVIELKAIGSLFP----AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHE  302 (359)
Q Consensus       254 ~~d~~E~~al~~~~~----~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~  302 (359)
                      .++.+..+++-..-.    ..++++++....+|||+||+|.+.++.+++.|++
T Consensus       345 INEAFAsQ~~yc~~KL~ld~ekVN~~GGaiAlGHPlGatGAR~VaTlL~emKr  397 (435)
T KOG1389|consen  345 INEAFASQALYCRNKLGLDPEKVNVNGGAIALGHPLGATGARCVATLLHEMKR  397 (435)
T ss_pred             hhHHHHHHHHHHHHHhCCCHHHcCCCCceeeccCCcCCccHhHHHHHHHHHHh
Confidence            444444444422211    4567888888889999999999999999999983

>PRK07855 lipid-transfer protein; Provisional

Probab=99.65  E-value=5.4e-15  Score=142.52  Aligned_cols=243  Identities=16%  Similarity=0.044  Sum_probs=152.7

Q ss_pred             HHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeee--CCCCCHH------------H---HHHHH
Q psy5293          25 AGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAA--ESCISQL------------S---IAAFC   84 (359)
Q Consensus        25 a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~--e~~~~~~------------~---~~~~~   84 (359)
                      ...++..+|+++  |...|+++| |+..+|..|+..|++|.+|+|||.|+  +......            .   ...+.
T Consensus        59 ~~~l~~~lGl~~~~~~~~v~~gg~sg~~~~~~A~~~I~sG~~d~vLv~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  138 (386)
T PRK07855         59 EIAVARALGIGELKFFSRIHYGGGAACATVQQAAMAVATGVADVVVCYRAFNERSGMRFGQGQTGLAENPTSTGVDYGWS  138 (386)
T ss_pred             HHHHHHHCCCCCCcceeeecCCcHHHHHHHHHHHHHHHCCCCCEEEEEeecccccccccccccccccccccccccchhhh
Confidence            346888999976  456899999 99999999999999999999999988  3210000            0   00000


Q ss_pred             -hhccccc-------------------------------cCCCCCCCCC--CCccCC--------------CCCceecce
Q psy5293          85 -RVRALAT-------------------------------QFNNEPAQAS--RPFDKR--------------RDGFVMGEG  116 (359)
Q Consensus        85 -~~~~l~~-------------------------------~~~~~~~~~~--~~fd~~--------------~~G~~~geG  116 (359)
                       ..+....                               +...+|....  ++++.+              -+.....||
T Consensus       139 ~~~g~~~~~~~~al~a~~ym~~~G~t~e~lA~vavk~~~~A~~NP~A~~~~~~~t~e~vl~s~~Ia~Pl~~~d~~~~sDG  218 (386)
T PRK07855        139 YPHGLLTPAAWVAMLARRYMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQESDG  218 (386)
T ss_pred             hhcCCCChHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHhcChHhhhcCCCCCHHHHhcCCcccCCchhhhcCCcCCc
Confidence             0110000                               0001343221  222211              122336899


Q ss_pred             eeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCccccc
Q psy5293         117 SAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVST  196 (359)
Q Consensus       117 a~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~  196 (359)
                      ++++++.+.+.+.+.++++ .+|.+++....                  +.                             
T Consensus       219 AaAvvl~see~A~~l~~~p-v~I~g~~~~~~------------------~~-----------------------------  250 (386)
T PRK07855        219 AVALVVTSAERARDLKQRP-AVIKAAAQGSG------------------AD-----------------------------  250 (386)
T ss_pred             eEEEEEecHHHHhhCCCCC-EEEEEEEEecC------------------Cc-----------------------------
Confidence            9999999999887766665 46777651000                  00                             


Q ss_pred             ccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--------
Q psy5293         197 ACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--------  268 (359)
Q Consensus       197 acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--------  268 (359)
                             .....  ......+. .......+++++++++|++++|||++|+|++++. .+...+++|+.+..        
T Consensus       251 -------~~~~~--~~~~~d~~-~~~~~~~aa~~a~~~AGi~~~DiDv~El~D~Ft~-~~l~~~E~lG~~~~Ge~~~~v~  319 (386)
T PRK07855        251 -------QYMMT--SYYRDDIT-GLPEMGLVARQLWAQSGLGPADIDTAILYDHFTP-FVLMQLEELGFCGRGEAKDFIA  319 (386)
T ss_pred             -------ccccc--cccccccc-ccchHHHHHHHHHHHcCCCHHHCcEEEeccCCcH-HHHHHHHHcCCCCCCcHHHHHH
Confidence                   00000  00000000 0123347899999999999999999999999995 55667777754432        


Q ss_pred             ------CCCceeccccccc--chHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEE
Q psy5293         269 ------AQRLMVSSTKGAH--GHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALK  340 (359)
Q Consensus       269 ------~~~~~v~~~k~~~--Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (359)
                            ++.+||+...+.+  ||+.   |+.+++++++||+                       +++. .|+++.+++++
T Consensus       320 ~G~~~~~G~lPvN~sGGll~~gh~~---G~~~i~E~~~QLr-----------------------G~a~-~QV~~a~~gl~  372 (386)
T PRK07855        320 DGALELGGRLPINTHGGQLGEAYIH---GMNGIAEAVRQLR-----------------------GTSV-NQVPGVENVLV  372 (386)
T ss_pred             CCCcccCCcccccCCCcccccCchh---hHHHHHHHHHHHh-----------------------CCCc-ccCCCCcEEEE
Confidence                  4568885444443  8977   8999999999999                       5553 47778999999


Q ss_pred             eCcCcCcceeeEEE
Q psy5293         341 NSFGFGGTNACLCI  354 (359)
Q Consensus       341 ~~~g~gG~~~~~il  354 (359)
                      ++.|...+ +.+||
T Consensus       373 ~~~Gg~~~-~~~~~  385 (386)
T PRK07855        373 TAGTGVPT-SGLIL  385 (386)
T ss_pred             ECCCCccc-eeEEe
Confidence            99874433 44655

>KOG1391|consensus

Probab=99.63  E-value=4.3e-16  Score=135.85  Aligned_cols=224  Identities=21%  Similarity=0.309  Sum_probs=156.3

Q ss_pred             HHHHHcCCC------ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHH---------------
Q psy5293          27 AISIDMDSK------VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFC---------------   84 (359)
Q Consensus        27 ~ia~~~g~~------gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~---------------   84 (359)
                      +++...|++      -|.++|+.-| ||.++|-.+++.|.-|+.+++|+||+|.|+........-               
T Consensus        67 Yl~RHvGL~~GvP~e~pALtiNRLCGSGFQsiVNgaQ~I~vgea~ivL~GGtEnMSq~Pf~vRnvRFGT~LG~~y~lED~  146 (396)
T KOG1391|consen   67 YLARHVGLRVGVPKETPALTINRLCGSGFQSIVNGAQEICVGEAEIVLCGGTENMSQAPFCVRNVRFGTKLGSDYKLEDS  146 (396)
T ss_pred             EeeeccccccCCcCccCceeehhhhcccHHHHHhhHHHhhcCcceEEEecCccccccCcceeeeeeeccccccccchhhh
Confidence            345555554      3899999999 999999999999999999999999999876542110000               


Q ss_pred             ------------hhccccc-------------------------------cCCC----------------CCCCCCCC--
Q psy5293          85 ------------RVRALAT-------------------------------QFNN----------------EPAQASRP--  103 (359)
Q Consensus        85 ------------~~~~l~~-------------------------------~~~~----------------~~~~~~~~--  103 (359)
                                  .+++...                               .+++                .-++..||  
T Consensus       147 LW~sLtD~y~kLpMa~TAEnL~~qyKisRee~DefaL~SQ~~Wkkaq~aG~fn~Ei~pI~~K~kkge~~f~vDEHpRp~T  226 (396)
T KOG1391|consen  147 LWVSLTDQYVKLPMAMTAENLAVQYKISREECDEFALQSQQRWKKAQDAGYFNDEIAPIEVKTKKGEQTFQVDEHPRPQT  226 (396)
T ss_pred             HhhhccchhhhcchhhhHHHhhhhheecHHHhhHHHhhhHHHHHhhhhcCcccccccceEEeeccCceeeEecCCCCccc
Confidence                        0000000                               0000                00111121  


Q ss_pred             -----------ccCCCCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccC
Q psy5293         104 -----------FDKRRDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLS  165 (359)
Q Consensus       104 -----------fd~~~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  165 (359)
                                 |..  +|++       ..+|++++++.+++...+..-++++++++++                      
T Consensus       227 T~E~L~KLppvFkK--dG~VtAGnASGi~DGA~AvivAsEdavK~~NlkPLARiVays----------------------  282 (396)
T KOG1391|consen  227 TLEQLQKLPPVFKK--DGTVTAGNASGIADGAGAVIVASEDAVKKHNLKPLARIVAYS----------------------  282 (396)
T ss_pred             hHHHHhhCCchhcc--CCeeeccccccccCCceeEEEechhHHhhcCCchhhhhheee----------------------
Confidence                       222  3333       5688899998888777777778888887765                      


Q ss_pred             cchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEE
Q psy5293         166 PYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYI  245 (359)
Q Consensus       166 p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~i  245 (359)
                                                                    .....|+.++.+++.+++.+|+.+|+..+|||.+
T Consensus       283 ----------------------------------------------~vGcdP~IMGIGPvPAI~~vLKksGlkl~DiDl~  316 (396)
T KOG1391|consen  283 ----------------------------------------------VVGCDPSIMGIGPVPAISGVLKKSGLKLKDIDLV  316 (396)
T ss_pred             ----------------------------------------------eeccChhhccccCcHHHHHHHHHcCCcccccceE
Confidence                                                          1124567777888999999999999999999999


Q ss_pred             EeccCCCCcccHHHHHHH--HhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCC
Q psy5293         246 NAHATSTPLGDVIELKAI--GSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY  321 (359)
Q Consensus       246 e~h~~~t~~~d~~E~~al--~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~  321 (359)
                      |.       ++....+.|  .+.++  ..+++|++....+|||+||||.+....+++.|+++                  
T Consensus       317 Ev-------NEAFApQ~LAv~r~L~ld~sKlNVNGGAIALGHPLgaSGsRIt~HlVHEL~Rr------------------  371 (396)
T KOG1391|consen  317 EV-------NEAFAPQYLAVERSLDLDISKLNVNGGAIALGHPLGASGSRITAHLVHELRRR------------------  371 (396)
T ss_pred             Ee-------chhhchHHHHHHHhhCCChhhccccCceeeccCccccCcchhhHHHHHHHHHc------------------
Confidence            94       444444444  33333  56789999999999999999999999999999831                  


Q ss_pred             CCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                                  +.++++-++.=-||+.-++++++.
T Consensus       372 ------------~~KYgiGSACIGGGQGIA~l~e~~  395 (396)
T KOG1391|consen  372 ------------GGKYGIGSACIGGGQGIAVLIEST  395 (396)
T ss_pred             ------------CCccccccccccCCceEEEEEEec
Confidence                        146666665545788888888864

>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism]

Probab=99.63  E-value=9.6e-16  Score=147.83  Aligned_cols=55  Identities=25%  Similarity=0.254  Sum_probs=51.4

Q ss_pred             HHHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHH
Q psy5293          24 PAGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQL   78 (359)
Q Consensus        24 ~a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~   78 (359)
                      ++.+++...|+..  |.++|+.+| ||++|+..|++.|++|.+|++|++|+|+|++..
T Consensus        69 ~ar~~a~~aGl~~~~p~~~V~~~c~SG~~Av~~A~~~I~sG~~dvvlagG~E~mS~~~  126 (392)
T COG0183          69 IARQAALAAGLPGSVPAVTVNRACASGLAAVRLAAQAIASGEADVVLAGGVEKMSDAP  126 (392)
T ss_pred             HHHHHHHHcCCCCCCCceEEeccchhHHHHHHHHHHHHHCCCCCEEEEEeeeeccCCC
Confidence            5889999999985  999999999 999999999999999999999999999987765

>PRK08257 acetyl-CoA acetyltransferase; Validated

Probab=99.59  E-value=3.4e-14  Score=140.88  Aligned_cols=103  Identities=16%  Similarity=0.036  Sum_probs=76.8

Q ss_pred             HHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcCC-CCceecccccccchHHHhHHHHHHHHHHHHHhc
Q psy5293         224 ALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPA-QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHE  302 (359)
Q Consensus       224 ~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~~-~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~  302 (359)
                      ...+++++|+++|++++|||++|+|++++. .....+++|+.+..+ .++++++.-...|||.+++|+.+++++++|||.
T Consensus       294 ~~~aa~~a~~~AGi~~~Did~~elydcF~~-~~~~~~E~LGl~~~g~~pvN~sGGl~s~G~P~~a~g~~~i~E~v~QLRg  372 (498)
T PRK08257        294 IRAAGRRALALAGLGIDDIDAFDLYSCFPS-AVQVAARELGLDLDDPRPLTVTGGLPFFGGPGNNYVTHAIAEMVERLRA  372 (498)
T ss_pred             HHHHHHHHHHHhCCCHHHCCEEEeccCCHH-HHHHHHHHcCcCCCCCCCcCCCcChhhcCCchhhHHHHHHHHHHHHHhh
Confidence            356899999999999999999999999985 446666776655432 244445544455999999999999999999992


Q ss_pred             CCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcC-cCcceeeEEEeec
Q psy5293         303 GLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFG-FGGTNACLCIAEY  357 (359)
Q Consensus       303 ~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g-~gG~~~~~il~~~  357 (359)
                                             +       ..+++|+++.| +...++..|+++-
T Consensus       373 -----------------------~-------~~~~gLv~~~GG~~~~~~~~vl~~~  398 (498)
T PRK08257        373 -----------------------N-------PGRRGLVTANGGYLTKHSVGVYSTE  398 (498)
T ss_pred             -----------------------c-------CCCEEEEECCCChhhceEEEEEeCC
Confidence                                   1       15789999886 3444555566553

>PRK07937 lipid-transfer protein; Provisional

Probab=99.59  E-value=1e-13  Score=131.80  Aligned_cols=226  Identities=16%  Similarity=0.085  Sum_probs=137.2

Q ss_pred             HHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH----------------------HHHHH
Q psy5293          28 ISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS----------------------IAAFC   84 (359)
Q Consensus        28 ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~----------------------~~~~~   84 (359)
                      ++..+|+.. ...+.+-+ +|..||..|+..|++|.+|+|||.|+|++.....                      ++.+.
T Consensus        67 ~~~~~G~~~-~~~~~~v~~~g~~a~~~A~~aI~sG~~d~VLv~g~~k~~~~~~~~~~~~~~~~~~~~p~G~~~~~~~Al~  145 (352)
T PRK07937         67 AIDSIGAVP-PINESHVEMDAAWALYEAWVKLLTGEVDTALVYGFGKSSAGTLRRVLALQLDPYTVAPLWPDSVSMAGLQ  145 (352)
T ss_pred             HHhhccCCC-CCceEEecCcHHHHHHHHHHHHhcCCCCEEEEEEecccCccchhhhhhccCCcceeccCCCchHHHHHHH
Confidence            345566632 23334445 7888999999999999999999999997532000                      00000


Q ss_pred             hhccccc-----------------cCCCCCCCCCCCccCC--------------CCCceecceeeEEeecchHHHHhcCC
Q psy5293          85 RVRALAT-----------------QFNNEPAQASRPFDKR--------------RDGFVMGEGSAILVLEELDHALARSA  133 (359)
Q Consensus        85 ~~~~l~~-----------------~~~~~~~~~~~~fd~~--------------~~G~~~geGa~a~~l~~~~~a~~~g~  133 (359)
                      ....+..                 +...+|....+ ++.+              -+...+.||++++++.+.+.+.+.+.
T Consensus       146 a~~ym~~yG~t~e~lA~vavk~r~nA~~NP~A~~r-it~edvl~s~~ia~PL~l~d~~~~~DGAaA~vl~s~~~A~~l~~  224 (352)
T PRK07937        146 ARAGLDAGKWTEEQMAEVAARSRADARRNPSAEPS-ISVDELLARPYFADPLRRHDIAPITDGAAAVVLAAGDRARELRE  224 (352)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHHHHHHhhCchhhcc-CCHHHHhcCCcccCCchhhcCCCCCCcceEEEEecHHHHHHcCC
Confidence            0000000                 00013332222 1110              12223789999999999998887776


Q ss_pred             cEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCcc
Q psy5293         134 NIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHH  213 (359)
Q Consensus       134 ~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~  213 (359)
                      ++ .+|.+.+.                                                               ..+...
T Consensus       225 ~p-v~I~g~~~---------------------------------------------------------------~~~~~~  240 (352)
T PRK07937        225 RP-AWITGIEH---------------------------------------------------------------RIESPS  240 (352)
T ss_pred             Cc-EEEEEEEE---------------------------------------------------------------eeCCcc
Confidence            66 77777651                                                               000000


Q ss_pred             CCCCCcChHHHHHHHHHHHHH-cCCCCCCccEEEeccCCCCcccHHHHHHHHhhcCCCCceeccccccc-chHHHhHHHH
Q psy5293         214 LTSPREDGRGALLAMTRALID-ANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAH-GHLLGAAGNL  291 (359)
Q Consensus       214 ~~~p~~~~~~~~~a~~~al~~-agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~-Gh~~~AsG~~  291 (359)
                      ....+   .....++++++++ +|++|+|||++|.|++++. .+...+++|+..   +++||+...+.+ |||.||+|+.
T Consensus       241 ~~~~d---~~~~~~~~~a~~~aAgi~~~diD~~Ei~D~F~~-~~l~~~e~lGl~---g~~pvN~~GG~l~ghp~gatG~~  313 (352)
T PRK07937        241 LGARD---LTRSPSTALAAEAATGGDAGGVDVAELHAPFTH-QELILREALGLG---DKTKVNPSGGALAANPMFAAGLE  313 (352)
T ss_pred             ccccc---cccHHHHHHHHHHhcCCCHHHCCEEEEeCCChH-HHHHHHHHcCCC---CCCCcCCCccchhcCchhHHHHH
Confidence            00000   0112344556666 5999999999999999995 445556665432   345554433322 9999999999


Q ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCc--CcceeeEEEee
Q psy5293         292 ESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGF--GGTNACLCIAE  356 (359)
Q Consensus       292 ~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~--gG~~~~~il~~  356 (359)
                      +++++++||+.                       +       +.+++++++.|.  +..+..+|+++
T Consensus       314 ~~~e~~~QL~g-----------------------~-------~a~~~l~~~~Gg~~~~~~~v~v~~~  350 (352)
T PRK07937        314 RIGEAARHIWD-----------------------G-------SARRALAHATSGPALQQNLVAVLEG  350 (352)
T ss_pred             HHHHHHHHHhc-----------------------c-------CCCEEEEecccccccceEEEEEEec
Confidence            99999999983                       2       268999998874  35666666665

>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.50  E-value=1.7e-13  Score=132.10  Aligned_cols=231  Identities=16%  Similarity=0.203  Sum_probs=135.5

Q ss_pred             HHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCCCC
Q psy5293          25 AGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRP  103 (359)
Q Consensus        25 a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~  103 (359)
                      +..++..+|+++++++++.+| |++.||..|+++|++|.+|.+||+|+|.+....                        .
T Consensus       135 a~~v~~~Lgl~~~~~~v~~aCasg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~------------------------~  190 (372)
T PRK07515        135 AIEIQQALGIEGFAFDMNVACSSATFGIQTAANAIRSGSARRVLVVNPEICSGHL------------------------N  190 (372)
T ss_pred             HHHHHHhcCCCCcEEEecchhHHHHHHHHHHHHHHHcCCCCEEEEEeeecccccc------------------------c
Confidence            778999999999999999999 999999999999999999999999999733111                        0


Q ss_pred             ccCCCCCceecceeeEEeecchHHHHhcC-CcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhH
Q psy5293         104 FDKRRDGFVMGEGSAILVLEELDHALARS-ANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQIS  182 (359)
Q Consensus       104 fd~~~~G~~~geGa~a~~l~~~~~a~~~g-~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia  182 (359)
                      |++...++++|||+++++|++.+.+..++ .++++......      +.   ..       +.                 
T Consensus       191 ~~d~~~~~lfGDgAaA~vL~~~~~~~~~~~~~il~~~~~~~------~~---~~-------~~-----------------  237 (372)
T PRK07515        191 FRDRDSHFIFGDVATAVIVERADTATSAGGFEILGTRLFTQ------FS---NN-------IR-----------------  237 (372)
T ss_pred             ccCCCCCEEecCccEEEEEeeccccccCCCceEEEEEeecc------cc---cc-------ee-----------------
Confidence            22334678999999999999765432222 13333221110      00   00       00                 


Q ss_pred             HHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHH
Q psy5293         183 IEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKA  262 (359)
Q Consensus       183 ~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~a  262 (359)
                      ...|..-+..  ..........  ...++....  ........++++++|++++++++|||++..|..++...|...   
T Consensus       238 ~~~G~~~~~~--~~~~~~~~~~--~~~~g~~~~--~~~~~~~~~~i~~~L~~~gl~~~dId~~~~Hq~~~~~~d~~~---  308 (372)
T PRK07515        238 NNFGFLNRAD--PEGIGARDKL--FVQEGRKVF--KEVCPMVAEHIVEHLAENGLTPADVKRFWLHQANINMNQLIG---  308 (372)
T ss_pred             cCCCCCCCCC--ccccccccce--EEeccHHHH--HHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHHH---
Confidence            0000000000  0000000000  000000000  000023567899999999999999999999999998666542   


Q ss_pred             HHhhcC----CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEE
Q psy5293         263 IGSLFP----AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVA  338 (359)
Q Consensus       263 l~~~~~----~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (359)
                       ..+++    ..+.+.  .-..+||+.+||=...+.++    +                       .+.  .+   .+.+
T Consensus       309 -~~llg~~~~~~~~~~--~~~~~GNt~sasi~~~L~~~----~-----------------------~~~--~~---Gd~v  353 (372)
T PRK07515        309 -KKVLGRDATPEEAPV--ILDEYANTSSAGSIIAFHKH----S-----------------------DDL--AA---GDLG  353 (372)
T ss_pred             -HHhccCCCChhhceE--eHHhcCCchhhHHHHHHHHH----h-----------------------ccC--CC---CCEE
Confidence             22233    111222  22446999998854444332    2                       111  01   4678


Q ss_pred             EEeCcCcCcceeeEEEee
Q psy5293         339 LKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       339 ~~~~~g~gG~~~~~il~~  356 (359)
                      +..+||.|-+-++++|+|
T Consensus       354 ll~~~G~G~~~~~~ll~~  371 (372)
T PRK07515        354 VICSFGAGYSIGSVIVRK  371 (372)
T ss_pred             EEEEecccHHHHHHHhcc
Confidence            888999887777777765

>KOG1392|consensus

Probab=99.39  E-value=1.4e-13  Score=121.91  Aligned_cols=106  Identities=19%  Similarity=0.230  Sum_probs=77.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHH------------hhcC---CCCceecccccccchHHHh
Q psy5293         223 GALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG------------SLFP---AQRLMVSSTKGAHGHLLGA  287 (359)
Q Consensus       223 ~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~------------~~~~---~~~~~v~~~k~~~Gh~~~A  287 (359)
                      ++..++-+.|+++|++..|||.+|.|-.+...- .....++.            .-++   ..+++..+....+|||.||
T Consensus       345 gpay~ipkll~kagltlkdid~feiheafagqi-lanlkamdsdwfck~ymgr~~kvg~ppl~k~nnwggslsighpfga  423 (465)
T KOG1392|consen  345 GPAYVIPKLLDKAGLTLKDIDVFEIHEAFAGQI-LANLKAMDSDWFCKEYMGRSGKVGRPPLDKLNNWGGSLSIGHPFGA  423 (465)
T ss_pred             ccccccHHHHHHcCCcccccchhhhHHHHhHHH-HhhhhhhcchHHHHHHhcccCccCCCChHHhcccCcceecCCcccc
Confidence            456778899999999999999999886543211 11111221            1111   2345556777788999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecCC
Q psy5293         288 AGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS  359 (359)
Q Consensus       288 sG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~~  359 (359)
                      +|+..+......|+                       .       ++.+++++.+...||+...+++|.|++
T Consensus       424 tgvrl~mh~anrl~-----------------------~-------e~gqygvvaacaaggqgvamlieaypk  465 (465)
T KOG1392|consen  424 TGVRLAMHSANRLK-----------------------E-------EKGQYGVVAACAAGGQGVAMLIEAYPK  465 (465)
T ss_pred             cchhhHHHHHhHHH-----------------------h-------hcCceeEeehhhcCCcceEEEeeccCC
Confidence            99999888888776                       1       125799999999999999999999985

>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.36  E-value=2.8e-11  Score=114.71  Aligned_cols=234  Identities=15%  Similarity=0.155  Sum_probs=135.4

Q ss_pred             HHHHHHHHcCCCc---cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCC
Q psy5293          24 PAGAISIDMDSKV---QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQ   99 (359)
Q Consensus        24 ~a~~ia~~~g~~g---p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~   99 (359)
                      .+.+++..+|++.   |+++|+.+| |++.||..|.++|++|.++.+||+++|.+....                     
T Consensus        91 ~a~~v~~~lgl~~~~~~~~~v~~~C~~~~~al~~a~~~l~~g~~~~~Lvv~~e~~s~~~---------------------  149 (329)
T PRK07204         91 TASLIQEQLGLQHSGIPCFDINSTCLSFITALDTISYAIECGRYKRVLIISSEISSVGL---------------------  149 (329)
T ss_pred             HHHHHHHHhCCCCCCceEEEccchhHHHHHHHHHHHHHHHCCCCCEEEEEEeccccCCC---------------------
Confidence            4889999999974   899999999 999999999999999999999999999732110                     


Q ss_pred             CCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchh
Q psy5293         100 ASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAG  179 (359)
Q Consensus       100 ~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~  179 (359)
                         .++....++++|||++++++++.+.    +.++.+....+-....+ +.+.    .......++...   .      
T Consensus       150 ---~~~~~~~~~lfGDGAaA~ll~~~~~----~~~il~~~~~t~~~~~~-~~~~----~~~~~~~~~~~~---~------  208 (329)
T PRK07204        150 ---NWGQNESCILFGDGAAAVVITKGDH----SSRILASHMETYSSGAH-LSEI----RGGGTMIHPREY---S------  208 (329)
T ss_pred             ---CcccCcceEEEecccEEEEEEEcCC----CCcEEEEEEEEecCCCC-ceEE----ecCCcCCCCccc---c------
Confidence               1222345788999999999986432    12332221111000000 0000    000000000000   0      


Q ss_pred             hhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHH
Q psy5293         180 QISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIE  259 (359)
Q Consensus       180 ~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E  259 (359)
                            .          . ..+.  .....++...  +........++++++|+++|++++|||++..|..+...     
T Consensus       209 ------~----------~-~~~~--~~~~~~~~~~--~~~~~~~~~~~i~~~L~~~gl~~~did~~~~H~~~~~~-----  262 (329)
T PRK07204        209 ------E----------E-RKED--FLFDMNGRAI--FKLSSKYLMKFIDKLLMDAGYTLADIDLIVPHQASGPA-----  262 (329)
T ss_pred             ------c----------c-cccC--ceEEECCHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----
Confidence                  0          0 0000  0000000000  00001234578899999999999999999999887653     


Q ss_pred             HHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEE
Q psy5293         260 LKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVAL  339 (359)
Q Consensus       260 ~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (359)
                      .+.+.+.++...-.+......+||+.+|+=...+.++   ++++.+                        .+   .+.++
T Consensus       263 ~~~i~~~l~l~~e~~~~~~~~~Gn~~sas~~~~L~~~---~~~g~~------------------------~~---Gd~vl  312 (329)
T PRK07204        263 MRLIRKKLGVDEERFVTIFEDHGNMIAASIPVALFEA---IKQKKV------------------------QR---GNKIL  312 (329)
T ss_pred             HHHHHHHcCCCHHHhhhhHhhhCcHHHHHHHHHHHHH---HHcCCC------------------------CC---CCEEE
Confidence            3355555552111122444567999988755554443   342221                        11   47888


Q ss_pred             EeCcCcCcceeeEEEe
Q psy5293         340 KNSFGFGGTNACLCIA  355 (359)
Q Consensus       340 ~~~~g~gG~~~~~il~  355 (359)
                      ..++|.|-+-++++|+
T Consensus       313 l~~~G~G~s~~~~ll~  328 (329)
T PRK07204        313 LLGTSAGLSIGGILLE  328 (329)
T ss_pred             EEEEchhhhheeeEEe
Confidence            9999999888888886

>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.34  E-value=4e-11  Score=113.11  Aligned_cols=224  Identities=18%  Similarity=0.174  Sum_probs=131.3

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      .+.+|+..+|+++ |.++|+++| ||+.||..|+++|++|++|.+||+|+|.+....           .           
T Consensus        91 ~~~~i~~~lG~~~~~~~~v~~~Casg~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-----------~-----------  148 (319)
T PRK09352         91 TACLVQARLGAKNAAAFDLSAACSGFVYALSTADQFIRSGAYKNVLVIGAEKLSRIV-----------D-----------  148 (319)
T ss_pred             HHHHHHHHhCCCCCcEeeccccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc-----------C-----------
Confidence            3788999999987 999999999 999999999999999999999999999733211           0           


Q ss_pred             CCccCCCCCceecceeeEEeecchHHHHhcCCcEEEE-EeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhh
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAE-IIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQ  180 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~  180 (359)
                        +++....+++|||++++++++....     .+... +...+     +..+... . .......|.. ..+        
T Consensus       149 --~~~~~~~~~~gDGaaA~ll~~~~~~-----~~~~~~~~~~~-----~~~~~~~-~-~~~~~~~~~~-~~~--------  205 (319)
T PRK09352        149 --WTDRSTCVLFGDGAGAVVLGASEEP-----GILSTHLGSDG-----SYGDLLY-L-PGGGSRGPAS-PGY--------  205 (319)
T ss_pred             --cccCCceEEEeccceEEEEEEcCCC-----CeEEEEEEEcC-----CCCCeEE-e-CCCCCCCCCC-CCc--------
Confidence              1122346789999999999875321     12111 11111     0000000 0 0000000000 000        


Q ss_pred             hHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHH
Q psy5293         181 ISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIEL  260 (359)
Q Consensus       181 ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~  260 (359)
                                                ...++...  +........++++++|++++++++||+++..|..+..     -.
T Consensus       206 --------------------------~~~~~~~~--~~~~~~~~~~~i~~~l~~~g~~~~di~~~~~h~~~~~-----~~  252 (319)
T PRK09352        206 --------------------------LRMEGREV--FKFAVRELAKVAREALEAAGLTPEDIDWLVPHQANLR-----II  252 (319)
T ss_pred             --------------------------eEECCHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HH
Confidence                                      00000000  0000123456889999999999999999999965443     22


Q ss_pred             HHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEE
Q psy5293         261 KAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALK  340 (359)
Q Consensus       261 ~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  340 (359)
                      ..+...++...-.+...-..+||..+|+=++.+..++   +++.+                         +  ..+..+.
T Consensus       253 ~~~~~~lg~~~~~~~~~~~~~Gn~~~a~~~~~L~~~~---~~g~~-------------------------~--~Gd~vll  302 (319)
T PRK09352        253 DATAKKLGLPMEKVVVTVDKYGNTSAASIPLALDEAV---RDGRI-------------------------K--RGDLVLL  302 (319)
T ss_pred             HHHHHHhCCCHHHhhhhHHhhCCHHHHHHHHHHHHHH---HcCCC-------------------------C--CCCEEEE
Confidence            3344444311101122234579999998666665443   32211                         1  1467888


Q ss_pred             eCcCcCcceeeEEEe
Q psy5293         341 NSFGFGGTNACLCIA  355 (359)
Q Consensus       341 ~~~g~gG~~~~~il~  355 (359)
                      .++|.|-+-.+++|+
T Consensus       303 ~s~G~G~~~~~~ll~  317 (319)
T PRK09352        303 EGFGGGLTWGAALVR  317 (319)
T ss_pred             EEEchhheeEEEEEE
Confidence            899988888888876

>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=99.34  E-value=1.1e-12  Score=105.15  Aligned_cols=108  Identities=25%  Similarity=0.312  Sum_probs=79.1

Q ss_pred             CCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHH
Q psy5293         216 SPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAF  295 (359)
Q Consensus       216 ~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~  295 (359)
                      .|..+..++..+++++|++++++++|||++|.|..++. ....-.+.+...  ..++++++....+|||.||||++++++
T Consensus        16 ~P~~~~~~p~~A~~~al~~ag~~~~did~~Ei~EaFA~-~~l~~~~~lg~~--~~~vN~~GG~la~GHP~gasG~r~~~~   92 (123)
T PF02803_consen   16 DPEDMGLGPVPAARKALERAGLTPDDIDVIEINEAFAA-QVLAFLEALGLD--PEKVNPNGGALALGHPLGASGARLVVE   92 (123)
T ss_dssp             -GGGGGGTHHHHHHHHHHHHT--GGGESEEEE--SBHH-HHHHHHHHHTTG--GGGBSTT--HHHH-BHTTTHHHHHHHH
T ss_pred             CHHHhCchHHHHHHHHHHHhCCCccccchhhccchhhh-HHHHhhcccccc--ccccCcccccccccccccccccchhhh
Confidence            34445567789999999999999999999999988874 223344444332  346777777777899999999999999


Q ss_pred             HHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         296 TILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       296 ~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                      ++++|++                       +       +.++++.+..+-+|...++||||
T Consensus        93 l~~~L~~-----------------------~-------~~~~gla~~~~ggG~g~a~ller  123 (123)
T PF02803_consen   93 LAHQLRR-----------------------R-------GGRYGLAAICAGGGQGSAVLLER  123 (123)
T ss_dssp             HHHHHHH-----------------------H-------TTSEEEEEEEETTTEEEEEEEEE
T ss_pred             hHHHHHH-----------------------h-------chhhhhHHhcccceeeEEEEEEC
Confidence            9999982                       1       25789999998999999999997

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 2WUA_B 4E1L_B 3SVK_A 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2IB8_B 2IBU_A 2IB9_C ....

>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein]

Probab=99.30  E-value=3.3e-11  Score=112.05  Aligned_cols=84  Identities=20%  Similarity=0.242  Sum_probs=72.5

Q ss_pred             ccCCChHHHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          17 PFFPNMVPAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        17 ~~~~~~~~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      ..+|++  |..|...||+++ +++.+..+| +.++||..|..+|++|.++.+||+|.|.++..                 
T Consensus        86 ~~~Ps~--A~~vq~~LG~~~~~afDl~aaCsgf~yaL~~A~~~i~sG~~k~vLVVg~e~~S~~-----------------  146 (323)
T COG0332          86 HLFPST--ACLVQARLGLGGAPAFDLQAACSGFLYALSVADGLIRSGGYKNVLVVGAETLSRI-----------------  146 (323)
T ss_pred             cCCChH--HHHHHHHhCCCCcceeechhhhHHHHHHHHHHHHHHHcCCCCEEEEEehhHhhcc-----------------
Confidence            337887  999999999988 999999999 99999999999999999999999999983211                 


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecchH
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEELD  126 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~  126 (359)
                             ..|+++.+.+++|||+++++++..+
T Consensus       147 -------ld~~dR~t~vlFgDGAgAvvl~~~~  171 (323)
T COG0332         147 -------LDWTDRDTCVLFGDGAGAVVLEATE  171 (323)
T ss_pred             -------CCHhhccceEEEcCCceEEEEecCC
Confidence                   1245567889999999999999875

>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III

Probab=99.25  E-value=3.1e-10  Score=107.01  Aligned_cols=224  Identities=18%  Similarity=0.185  Sum_probs=131.2

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      .+.+++..+|+++ |.++|+.+| |++.||..|+++|++|.++.+||+++|.+....           .           
T Consensus        90 ~a~~l~~~lGl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~~Lvv~~e~~~~~~-----------~-----------  147 (318)
T TIGR00747        90 AACMVQAYLGIKGIPAFDLSAACAGFIYALSVAKQYIESGKYKTVLVVGAEKLSSTL-----------D-----------  147 (318)
T ss_pred             HHHHHHHHhCCCCCcEeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-----------C-----------
Confidence            3788999999998 999999999 999999999999999999999999999733221           0           


Q ss_pred             CCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhh
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQI  181 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i  181 (359)
                        +......+++|||+++++|++.+...    .+........    ..+.+....-.......+...             
T Consensus       148 --~~~~~~~~~~GDGAaA~lL~~~~~~~----~i~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~-------------  204 (318)
T TIGR00747       148 --WTDRGTCVLFGDGAGAVVLGESEDPG----GIISTHLGAD----GTQGEALYLPAGGRPTSGPSP-------------  204 (318)
T ss_pred             --cCCCCeEEEEecceeEEEEeecCCCC----cEEEEEEEEc----CCCcceEEECCCCcCCCCCCC-------------
Confidence              01122346789999999998643221    1211111110    000000000000000000000             


Q ss_pred             HHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHH
Q psy5293         182 SIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELK  261 (359)
Q Consensus       182 a~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~  261 (359)
                                            -  ...++...  .........+++++++++++++++||+++..|..+..     -..
T Consensus       205 ----------------------~--~~~~~~~~--~~~~~~~~~~~~~~~l~~~g~~~~di~~~~~h~~~~~-----~~~  253 (318)
T TIGR00747       205 ----------------------F--ITMEGNEV--FKHAVRKMGDVVEETLEANGLDPEDIDWFVPHQANLR-----IIE  253 (318)
T ss_pred             ----------------------c--eEECCHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHH
Confidence                                  0  00000000  0000133456788999999999999999999977654     223


Q ss_pred             HHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEE
Q psy5293         262 AIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVAL  339 (359)
Q Consensus       262 al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (359)
                      .+.+.++  ..++. .... .+||..+|+=...+..++   +++.+                         +  ..+..+
T Consensus       254 ~~~~~lgi~~~k~~-~~~~-~~Gn~~sas~~~~L~~~~---~~~~~-------------------------~--~Gd~vl  301 (318)
T TIGR00747       254 ALAKRLELDMSQVV-KTVH-KYGNTSAASIPLALDELL---RTGRI-------------------------K--PGDLLL  301 (318)
T ss_pred             HHHHHcCCCHHHee-ehHh-hhCCHHHHHHHHHHHHHH---HcCCC-------------------------C--CCCEEE
Confidence            3444444  12232 2232 379999998666655433   32221                         1  146788


Q ss_pred             EeCcCcCcceeeEEEe
Q psy5293         340 KNSFGFGGTNACLCIA  355 (359)
Q Consensus       340 ~~~~g~gG~~~~~il~  355 (359)
                      ..++|.|-+..+++|+
T Consensus       302 l~~~G~G~t~~~~~l~  317 (318)
T TIGR00747       302 LVAFGGGLTWGAALVR  317 (318)
T ss_pred             EEEEehhheeeEEEEE
Confidence            8888988888888875

Active site residues include Cys112, His244 and Asn274 of E. coli FabH. Cys-112 is the site of acyl group attachment.

>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.23  E-value=4.6e-10  Score=108.37  Aligned_cols=97  Identities=18%  Similarity=0.255  Sum_probs=76.2

Q ss_pred             HHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHh-hccccccCCCCCCCCC
Q psy5293          25 AGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCR-VRALATQFNNEPAQAS  101 (359)
Q Consensus        25 a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~-~~~l~~~~~~~~~~~~  101 (359)
                      +.++...+|++. |.+.|+.+| |++.||..|.++|++|.++.+||+|+|.++.......+.. .+.+..    .+...+
T Consensus       103 a~~v~~~Lgl~~~~~~~v~~~Cas~~~al~~A~~~i~sg~~~~vLvv~~E~~s~~~~~~~~~~~~~~~~~----~~~~~~  178 (378)
T PRK06816        103 ASMVHGELGAPPIEVVSSAGVCAAGMMALKYAYLSVKAGESRNAVATASELASRWFRASRFEAEEEKLAE----LEENPE  178 (378)
T ss_pred             HHHHHhhCCCCCCceeeecCcCHHHHHHHHHHHHHHHCCCCCEEEEEeEccchhhhhhhhhhhHHHHhhc----CcccCC
Confidence            567888999876 999999999 9999999999999999999999999998665543322211 222221    123456


Q ss_pred             CCccCCCCCceecceeeEEeecch
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                      ++|+.+..++++|||++|+++++.
T Consensus       179 ~~~~~~~~~~~fGDGA~A~vl~~~  202 (378)
T PRK06816        179 IAFEKDFLRWMLSDGAGAVLLENK  202 (378)
T ss_pred             CCCCCCCCCEeeecccEEEEEEec
Confidence            889999999999999999999764

>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.23  E-value=1.1e-09  Score=103.64  Aligned_cols=228  Identities=17%  Similarity=0.190  Sum_probs=132.4

Q ss_pred             HHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      .+.+++..+|++ .+.+.|+.+| +++.||..|.++|++|.++.+||+++|.+....           .           
T Consensus        92 ~a~~l~~~lg~~~~~~~~v~~~C~~~~~al~~A~~~l~~g~~~~~Lvv~~e~~s~~~-----------~-----------  149 (325)
T PRK12879         92 TASQVQARLGIPNAAAFDINAACAGFLYGLETANGLITSGLYKKVLVIGAERLSKVT-----------D-----------  149 (325)
T ss_pred             HHHHHHHHhCCCCCcEEEECccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcCcC-----------C-----------
Confidence            478999999997 4999999999 999999999999999999999999999732110           0           


Q ss_pred             CCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhh
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQI  181 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i  181 (359)
                        ++......++|||++++++++...    +..+.....+......+.+.             .+...... +.      
T Consensus       150 --~~~~~~~~~~GDgAaA~ll~~~~~----~~~~~~~~~~~~~~~~~~~~-------------~~~~~~~~-~~------  203 (325)
T PRK12879        150 --YTDRTTCILFGDGAGAVVLEATEN----EPGFIDYVLGTDGDGGDILY-------------RTGLGTTM-DR------  203 (325)
T ss_pred             --ccccCceEEEeecceEEEEEecCC----CCCeEEEEEEEcCCCCCeEE-------------EcCCCCCC-Cc------
Confidence              111234578999999999986432    11221111111000000000             00000000 00      


Q ss_pred             HHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHH
Q psy5293         182 SIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELK  261 (359)
Q Consensus       182 a~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~  261 (359)
                                     ........+..  ++...  +........++++++|++++++++||+++..|-.+..     -.+
T Consensus       204 ---------------~~~~~~~~~~~--~~~~~--~~~~~~~~~~~i~~~L~~~g~~~~did~~~~h~~~~~-----~~~  259 (325)
T PRK12879        204 ---------------DALSGDGYIVQ--NGREV--FKWAVRTMPKGARQVLEKAGLTKDDIDWVIPHQANLR-----IIE  259 (325)
T ss_pred             ---------------cccccCccEEE--cCHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH-----HHH
Confidence                           00000000000  00000  0000123456789999999999999999999965433     234


Q ss_pred             HHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEE
Q psy5293         262 AIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVAL  339 (359)
Q Consensus       262 al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (359)
                      .+...++  ..++..  ....+||+.+|+=...+..+   ++++.+                         +  ..+..+
T Consensus       260 ~~~~~lg~~~~~~~~--~~~~~Gn~~sas~~~~L~~~---~~~g~~-------------------------~--~Gd~vl  307 (325)
T PRK12879        260 SLCEKLGIPMEKTLV--SVEYYGNTSAATIPLALDLA---LEQGKI-------------------------K--PGDTLL  307 (325)
T ss_pred             HHHHHcCCCHHHhhh--hHhhhCchHHHHHHHHHHHH---HHcCCC-------------------------C--CCCEEE
Confidence            4555554  222322  23567999999866655444   342221                         1  146788


Q ss_pred             EeCcCcCcceeeEEEe
Q psy5293         340 KNSFGFGGTNACLCIA  355 (359)
Q Consensus       340 ~~~~g~gG~~~~~il~  355 (359)
                      ..++|.|-+-++++++
T Consensus       308 l~~~G~G~~~~~~l~~  323 (325)
T PRK12879        308 LYGFGAGLTWAALLVK  323 (325)
T ss_pred             EEEEchhhhhEEEEEE
Confidence            8899998888888876

>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems

Probab=99.14  E-value=1.5e-09  Score=102.40  Aligned_cols=79  Identities=20%  Similarity=0.303  Sum_probs=65.5

Q ss_pred             HHHHHHHHcCC-Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDS-KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~-~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      .+.+++..+|+ +.|.++|+.+| |++.||..|.++|++|.++.+||+++|.+....                       
T Consensus        89 ~~~~l~~~lg~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvv~~e~~s~~~-----------------------  145 (320)
T cd00830          89 TACLVQARLGAKNAAAFDINAACSGFLYGLSTAAGLIRSGGAKNVLVVGAETLSRIL-----------------------  145 (320)
T ss_pred             HHHHHHHHhCCCCCcEeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEehhhcccc-----------------------
Confidence            47899999999 45999999999 999999999999999999999999999733211                       


Q ss_pred             CCccCCCCCceecceeeEEeecchH
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEELD  126 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~~  126 (359)
                       .|+....+.++|||++++++++.+
T Consensus       146 -~~~~~~~~~~~GDgAaA~ll~~~~  169 (320)
T cd00830         146 -DWTDRSTAVLFGDGAGAVVLEATE  169 (320)
T ss_pred             -CcccCCceEEEeccceEEEEEecC
Confidence             023344678899999999998753

It is found in bacteria and plants. Elongation of fatty acids in the type II systems occurs by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP. KASIII initiates this process by specifically using acetyl-CoA over acyl-CoA.

>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=99.14  E-value=1.7e-09  Score=102.91  Aligned_cols=233  Identities=17%  Similarity=0.144  Sum_probs=134.4

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCC
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQA  100 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~  100 (359)
                      .+.+++..+|++  .+.+.|+++| |++.||..|.++|++|.++.+||+++|.+..... ..+..  ...      +...
T Consensus       100 ~a~~v~~~lgl~~~~~~~~v~~~C~~~~~al~~A~~~i~~g~~~~~Lvv~~e~~s~~~~-~~~~~--~~~------~~~~  170 (338)
T PRK09258        100 TACRVHHNLGLPKSCANFDVSNACLGFLNGMLDAANMIELGQIDYALVVSGESAREIVE-ATIDR--LLA------PETT  170 (338)
T ss_pred             HHHHHHHHcCCCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEecccchhcc-chhhh--hcc------Cccc
Confidence            488999999996  3899999999 9999999999999999999999999998433211 11110  001      1111


Q ss_pred             CCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhh
Q psy5293         101 SRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQ  180 (359)
Q Consensus       101 ~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~  180 (359)
                      ..+|+.....+++|||++++++++.... ..+.++.......-   . +..       +.... .+    . .       
T Consensus       171 ~~~~~~~~~~~~~GDGA~A~ll~~~~~~-~~~~~~~~~~~~~~---~-~~~-------~~~~~-~~----~-~-------  225 (338)
T PRK09258        171 REDFAQSFATLTLGSGAAAAVLTRGSLH-PRGHRLLGGVTRAA---T-EHH-------ELCQG-GR----D-G-------  225 (338)
T ss_pred             hhhhhhccceEEecccceEEEEecCCCC-CCcceeeeeeeecC---C-Ccc-------ccccc-Cc----c-c-------
Confidence            2356666667889999999999864321 11122211111000   0 000       00000 00    0 0       


Q ss_pred             hHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHH
Q psy5293         181 ISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIEL  260 (359)
Q Consensus       181 ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~  260 (359)
                                                ...++.....  .......++++++|++++++++|||++..|-.+....     
T Consensus       226 --------------------------~~~~~~~~~~--~~~~~~~~~~~~~L~~~g~~~~did~~i~H~~~~~~~-----  272 (338)
T PRK09258        226 --------------------------MRTDAVGLLK--EGVELAVDTWEAFLAQLGWAVEQVDRVICHQVGAAHT-----  272 (338)
T ss_pred             --------------------------eEEcHHHHHH--HHHHHHHHHHHHHHHHcCCCHHHCCEEecCCCCHHHH-----
Confidence                                      0000000000  0002334678899999999999999999997665433     


Q ss_pred             HHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEE
Q psy5293         261 KAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVA  338 (359)
Q Consensus       261 ~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (359)
                      +.+.+.++  ..+++. ..+ .+||+.+|+=...+..+   ++++.+                        .+   .+.+
T Consensus       273 ~~~~~~lgl~~~k~~~-~~~-~~GN~~sas~~~~L~~~---~~~g~~------------------------~~---Gd~v  320 (338)
T PRK09258        273 RAILKALGIDPEKVFT-TFP-TLGNMGPASLPITLAMA---AEEGFL------------------------KP---GDRV  320 (338)
T ss_pred             HHHHHHhCCCHHHcee-hHh-hhCCcHHhHHHHHHHHH---HHhCCC------------------------CC---CCEE
Confidence            23444443  223333 233 57999999755555544   332211                        11   4678


Q ss_pred             EEeCcCcCcceeeEEEe
Q psy5293         339 LKNSFGFGGTNACLCIA  355 (359)
Q Consensus       339 ~~~~~g~gG~~~~~il~  355 (359)
                      +..++|.|-+...++++
T Consensus       321 ll~~~G~G~s~~~~~~~  337 (338)
T PRK09258        321 ALLGIGSGLNCSMLEVK  337 (338)
T ss_pred             EEEEechhHhhHhHeee
Confidence            88888887666655554

>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional

Probab=99.08  E-value=8.1e-09  Score=97.75  Aligned_cols=78  Identities=14%  Similarity=0.247  Sum_probs=62.7

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      .+.+++..+|++. +.+.|+++| |++.||..|.++|++|.++.+||+|+|.+....                       
T Consensus        89 ~~~~v~~~Lg~~~~~~~~v~~~Casg~~al~~A~~~i~sg~~~~~Lvv~~e~~s~~~-----------------------  145 (326)
T CHL00203         89 SASQLQAEIGATRAVAFDITAACSGFILALVTATQFIQNGSYKNILVVGADTLSKWI-----------------------  145 (326)
T ss_pred             hHHHHHHHhCCCCCceeeecccchhHHHHHHHHHHHHHcCCCCEEEEEEehhhhCcC-----------------------
Confidence            3567888999976 889999999 999999999999999999999999999732211                       


Q ss_pred             CCccCCCCCceecceeeEEeecch
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                       .+++....+++|||++++++++.
T Consensus       146 -~~~~~~~~~~fgDga~A~ll~~~  168 (326)
T CHL00203        146 -DWSDRKTCILFGDGAGAAIIGAS  168 (326)
T ss_pred             -CcccCCceEEEcceeeEEEEEEc
Confidence             01222346789999999999763

>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III

Probab=99.02  E-value=2e-08  Score=97.01  Aligned_cols=78  Identities=17%  Similarity=0.247  Sum_probs=63.5

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      .+.+++..+|++. |++.|+.+| +++.||..|.++|++|.++.+||+|+|.+....                       
T Consensus       134 ~a~~v~~~LG~~~~~~~dv~~~Ca~~~~aL~~A~~~l~~g~~~~vLVv~~e~~s~~~-----------------------  190 (379)
T PLN02326        134 SAPQVQAALGCTNALAFDLTAACSGFVLGLVTAARFIRGGGYKNVLVIGADALSRYV-----------------------  190 (379)
T ss_pred             HHHHHHHHhCCCCCceeeccccchHHHHHHHHHHHHHHcCCCCEEEEEEechhcCCC-----------------------
Confidence            4678999999976 889999999 999999999999999999999999999732111                       


Q ss_pred             CCccCCCCCceecceeeEEeecch
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                       .|++....+++|||+++++|++.
T Consensus       191 -~~~d~~~~~lfGDGAaAvlL~~~  213 (379)
T PLN02326        191 -DWTDRGTCILFGDGAGAVVLQAC  213 (379)
T ss_pred             -CccccCceEEEcceeEEEEEEEc
Confidence             11223445689999999999864

>PRK06840 hypothetical protein; Validated

Probab=98.91  E-value=5.3e-08  Score=92.69  Aligned_cols=49  Identities=14%  Similarity=0.095  Sum_probs=45.8

Q ss_pred             HHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHc-CCCCEEEEeeeCC
Q psy5293          25 AGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQG-GHADVMIAGAAES   73 (359)
Q Consensus        25 a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~-G~~d~~lvgg~e~   73 (359)
                      +.+|+..+|++. +.+.|+.+| +++.||..|.++|++ |.++.+||++.|.
T Consensus        94 a~~l~~~lGl~~~~~~~v~~~C~~~~~al~~A~~~l~~~g~~~~~Lvv~~~~  145 (339)
T PRK06840         94 APKIQHEIGAKNAWAFDIMAVCASFPIALKVAKDLLYSDPSIENVLLVGGYR  145 (339)
T ss_pred             HHHHHHHhCCCCcccccccccchHHHHHHHHHHHHHhcCCCccEEEEEeecc
Confidence            788999999976 899999999 999999999999999 9999999999986

>TIGR02845 spore_V_AD stage V sporulation protein AD

Probab=98.87  E-value=1.9e-08  Score=92.78  Aligned_cols=85  Identities=18%  Similarity=0.208  Sum_probs=64.3

Q ss_pred             HHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCCC
Q psy5293          24 PAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASR  102 (359)
Q Consensus        24 ~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  102 (359)
                      ++..++..+|+  |.+.|+++| |++.||..|..+|++|.+|.+||+++|...+....     .+...      .++.  
T Consensus        86 ~As~vA~~LGI--P~fdV~~ACSTf~~AL~lAa~lI~SG~ad~VLVV~Ssh~S~AErq-----fr~p~------eyg~--  150 (327)
T TIGR02845        86 TANFVARDLGI--PFLGLYGACSTSMETLALGAMLVDGGFADRVLAATSSHYATAERQ-----FRYPT------EYGV--  150 (327)
T ss_pred             HHHHHHHHhCC--CEEEEeccCHHHHHHHHHHHHHHhCCCCCEEEEEEecccchhhhh-----ccccc------cccc--
Confidence            67889999986  889999999 99999999999999999999999999974433211     11110      0111  


Q ss_pred             CccCCCCCceecceeeEEeecch
Q psy5293         103 PFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus       103 ~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                        .+.......++|++++++++.
T Consensus       151 --q~~~ta~~tgdGAGA~vl~~~  171 (327)
T TIGR02845       151 --QKPPTAQWTVTGAGAVLLAST  171 (327)
T ss_pred             --CCCCeeeEEEcccEEEEEeec
Confidence              233456678999999999865

Bacillus and Clostridium species contain about 10 % dipicolinic acid (pyridine-2,6-dicarboxylic acid) by weight. This protein family, SpoVAD, belongs to the spoVA operon that is suggested to act in the transport of dipicolinic acid (DPA) from the mother cell, where DPA is synthesized, to the forespore, a process essential to sporulation. Members of this protein family are found, so far, in exactly those species believed capable of endospore formation.

>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative

Probab=98.83  E-value=1.6e-07  Score=89.67  Aligned_cols=212  Identities=15%  Similarity=0.146  Sum_probs=124.5

Q ss_pred             HHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          25 AGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        25 a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      +..+...+|++  .+.+.|..+| +++.||..|..+|++|.++.+||++.|.+..                   +|..  
T Consensus        90 a~~v~~~LGl~~~~~~~dv~~aC~g~~~al~~A~~~i~sg~~~~vLVv~~d~~~~-------------------~~~~--  148 (345)
T TIGR00748        90 ATIVAEAIGATPDLTAADLEFACKAGTAGIQACMGLVASGMIKYGLAIGADTAQG-------------------APGD--  148 (345)
T ss_pred             HHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEeeccc-------------------CCCc--
Confidence            67899999986  3899999999 9999999999999999999999999997320                   0111  


Q ss_pred             CCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhh
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQI  181 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i  181 (359)
                            ..-+..|+|++++++++...        ...+.+....           ..+.+...++.              
T Consensus       149 ------~~~~~~GDGAaA~vl~~~~~--------~~~~~~~~~~-----------~~d~~~~~~~~--------------  189 (345)
T TIGR00748       149 ------ALEYTAGAGGAAYIIGEKNT--------VAYFEGTYSY-----------TTDTPDFWRRE--------------  189 (345)
T ss_pred             ------cCcccCCCceEEEEEccCCc--------ceEeecccce-----------ecccccccccC--------------
Confidence                  11245699999999975321        1122111100           00000000000              


Q ss_pred             HHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHH
Q psy5293         182 SIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELK  261 (359)
Q Consensus       182 a~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~  261 (359)
                             +.....            .   .........-.....++++++|++++++++|||++..|-.+..     -.+
T Consensus       190 -------~~~~~~------------~---~~~~~~~~~~~~~~~~~~~~~L~~~gl~~~did~~i~Hq~~~~-----~~~  242 (345)
T TIGR00748       190 -------GEPYPR------------H---GGRFTGEPAYFHHVVTAAKGLMEKLGLTPEDFDYAVFHQPNGK-----FYL  242 (345)
T ss_pred             -------CCcCCC------------c---CCeecChHHHHHHHHHHHHHHHHHcCCCHHHcCEEEeCCCChH-----HHH
Confidence                   000000            0   0000000000123347788999999999999999998855443     222


Q ss_pred             HHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEE
Q psy5293         262 AIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVAL  339 (359)
Q Consensus       262 al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  339 (359)
                      .+.+.++  ..+++.+-.-..+||+.+||=.+.+..++..++                             +   .+.++
T Consensus       243 ~~~~~lgl~~ek~~~~~~~~~~GNt~sAsipl~L~~~~~~~~-----------------------------~---Gd~vl  290 (345)
T TIGR00748       243 VAARMLGFPKEQVKPGLLTPRIGNTYSGATPVGLSAVLDIAE-----------------------------P---GDRIL  290 (345)
T ss_pred             HHHHHcCCCHHHeeccccccccCchhhhHHHHHHHHHHHhcC-----------------------------C---CCEEE
Confidence            2334333  122332211245799999986666655532111                             1   35788


Q ss_pred             EeCcCcCcceeeEEEe
Q psy5293         340 KNSFGFGGTNACLCIA  355 (359)
Q Consensus       340 ~~~~g~gG~~~~~il~  355 (359)
                      ..+||.|-+.++++++
T Consensus       291 l~~~G~G~s~~~~~~~  306 (345)
T TIGR00748       291 AVSYGSGAGSDAFSIV  306 (345)
T ss_pred             EEEecCCcceeEEEEE
Confidence            8999988887777774

Thus, although there is no experimental evidence supporting this name, the bioinformatics-based conclusion appears to be sound.

>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes

Probab=98.81  E-value=2.1e-07  Score=87.87  Aligned_cols=78  Identities=15%  Similarity=0.158  Sum_probs=65.5

Q ss_pred             HHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      .+.+++..+|++ .|.++|+.+| |++.||..|.++|++|.++.+||+++|.+....                   .   
T Consensus        87 ~~~~i~~~lg~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlvv~~e~~~~~~-------------------~---  144 (324)
T cd00827          87 AATYLAELLGLTNAEAFDLKQACYGGTAALQLAANLVESGPWRYALVVASDIASYLL-------------------D---  144 (324)
T ss_pred             HHHHHHHHcCCCCCceeehhhhhHHHHHHHHHHHHHHHcCCCCEEEEEEEHHhhhcc-------------------c---
Confidence            478899999995 6999999999 999999999999999999999999999733221                   0   


Q ss_pred             CCccCCCCCceecceeeEEeecchH
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEELD  126 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~~  126 (359)
                         .....++++|||++++++++.+
T Consensus       145 ---~~~~~~~~~gdgaaA~ll~~~~  166 (324)
T cd00827         145 ---EGSALEPTLGDGAAAMLVSRNP  166 (324)
T ss_pred             ---CCCCccccccCceEEEEEecCc
Confidence               2334678899999999998754

They are characterized by the utlization of CoA substrate primers, as well as the nature of their active site residues.

>PRK04262 hypothetical protein; Provisional

Probab=98.77  E-value=4e-07  Score=87.01  Aligned_cols=49  Identities=18%  Similarity=0.262  Sum_probs=45.3

Q ss_pred             HHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCC
Q psy5293          25 AGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAES   73 (359)
Q Consensus        25 a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~   73 (359)
                      +.++...+|++.  +.+.++.+| +++.+|..|.++|++|.++.+||++.|.
T Consensus        91 a~~v~~~Lgl~~~~~~~dv~~~C~~~~~aL~~A~~~i~sg~~~~aLVv~~e~  142 (347)
T PRK04262         91 ATIVAEALGATPDLTAADLEFACKAGTAALQAAMGLVKSGMIKYALAIGADT  142 (347)
T ss_pred             HHHHHHHcCCCCCceEEEHHHhHHHHHHHHHHHHHHHHcCCCCEEEEEEEee
Confidence            668889999964  778999999 9999999999999999999999999996

>KOG1394|consensus

Probab=98.76  E-value=3.4e-10  Score=103.60  Aligned_cols=113  Identities=39%  Similarity=0.625  Sum_probs=87.3

Q ss_pred             EEEeecccccchhhhhhh-hhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCC
Q psy5293         137 AEIIGYGMIDLSDVLSSN-NALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLT  215 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~  215 (359)
                      ++.+|.++.....+.+.. ...++..+++.||++++.+.||++..++.+||++||++.+++|||+|+++||.   +..++
T Consensus       125 GV~iGtgmg~l~~i~e~a~~~~~~g~rrvsPffVPkil~NM~ag~vsm~~gl~GpnhsvSTACATg~h~igd---a~n~I  201 (440)
T KOG1394|consen  125 GVLIGTGMGDLEDIYETAQNLSEKGYRRVSPFFVPKILTNMAAGYVSMKYGLRGPNHSVSTACATGNHCIGD---AFNFI  201 (440)
T ss_pred             ceEeccccccHHHHHHHHHHHHHhcccccCccccchhhcccccchhhhhhcCcCCchhhHhhhhhccchHHH---HHHHH
Confidence            678888888887777644 44477799999999999999999999999999999999999999999999998   44444


Q ss_pred             CCCcChHHHHHHHHHHHHHcCCCCCCcc-EEEeccCCCCcccH
Q psy5293         216 SPREDGRGALLAMTRALIDANLSPGDIS-YINAHATSTPLGDV  257 (359)
Q Consensus       216 ~p~~~~~~~~~a~~~al~~agl~~~dI~-~ie~h~~~t~~~d~  257 (359)
                      +     .|..+.|.++..++-|.|-.+. |+-+.+.+|+..|+
T Consensus       202 r-----~GdaDvmlAGgsE~~I~PlslaGF~r~RALSt~nd~P  239 (440)
T KOG1394|consen  202 R-----LGDADVMLAGGSEACINPLSLAGFSRARALSTRNDNP  239 (440)
T ss_pred             H-----hCccceeeccCcceeecchhhhhHHHHHHhhhcCCCc
Confidence            4     3445666666666666666555 66666665554444

>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=98.75  E-value=2.7e-07  Score=87.32  Aligned_cols=81  Identities=12%  Similarity=0.100  Sum_probs=62.6

Q ss_pred             cCCChHHHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCC
Q psy5293          18 FFPNMVPAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNN   95 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~   95 (359)
                      .+|.+  +.+|+..+|++. +.+.|+.+| +++.||..|.++|++|. +.+||+++|.+...           +.     
T Consensus        87 ~~p~~--a~~v~~~Lg~~~~~~~di~~~C~g~~~aL~~A~~~l~~~~-~~aLVv~~d~~s~~-----------~~-----  147 (326)
T PRK05963         87 LLPPS--APLLAHRLGLQNSGAIDLAGACAGFLYALVLADGFVRAQG-KPVLVVAANILSRR-----------IN-----  147 (326)
T ss_pred             CCCcH--HHHHHHHhCCCCCceeeccchhhHHHHHHHHHHHHHHcCC-CeEEEEEechhhcc-----------CC-----
Confidence            34454  789999999965 899999999 99999999999999985 89999999962211           11     


Q ss_pred             CCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          96 EPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        96 ~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                       +       +.....+++|||++++++++.
T Consensus       148 -~-------~~~~~~~lfGDgA~A~ll~~~  169 (326)
T PRK05963        148 -M-------AERASAVLFADAAGAVVLAPS  169 (326)
T ss_pred             -c-------cccCceEEEeecceEEEEEec
Confidence             1       112346789999999999853

>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed

Probab=98.62  E-value=6.9e-07  Score=85.43  Aligned_cols=80  Identities=16%  Similarity=0.191  Sum_probs=62.6

Q ss_pred             cCCChHHHHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          18 FFPNMVPAGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      .+|.+  +.++...||++.  +.+.|+.+| +++.+|..|..+|++|..+ +||+++|.....           +.    
T Consensus        95 ~~P~~--a~~v~~~Lg~~~~~~~~di~~~C~g~~~aL~~A~~~i~~~~~~-~LVv~~e~~S~~-----------~~----  156 (353)
T PRK12880         95 FMPST--ACYLHQLLNLSSKTIAFDLGQACAGYLYGLFVAHSLIQSGLGK-ILLICGDTLSKF-----------IH----  156 (353)
T ss_pred             CCCcH--HHHHHHHhCCCCCceEEehhhhhHHHHHHHHHHHHHHHcCCCC-EEEEEehhhhcc-----------CC----
Confidence            45665  999999999963  789999999 9999999999999999999 888888862111           10    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecc
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEE  124 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~  124 (359)
                        +       ++.....++|||++|+++++
T Consensus       157 --~-------~d~~~~~lFGDGAaA~vl~~  177 (353)
T PRK12880        157 --P-------KNMNLAPIFGDGVSATLIEK  177 (353)
T ss_pred             --c-------ccCCceeeecccceEEEEEe
Confidence              1       11233567899999999975

>PRK08304 stage V sporulation protein AD; Validated

Probab=98.59  E-value=2.8e-07  Score=85.32  Aligned_cols=83  Identities=19%  Similarity=0.230  Sum_probs=61.2

Q ss_pred             HHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCC--CC
Q psy5293          24 PAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPA--QA  100 (359)
Q Consensus        24 ~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~--~~  100 (359)
                      .+..++..+|+  |.+.|+++| |+..||..|..+|++|.+|.+||++++.+.+....        +.     .|.  +.
T Consensus        92 sAs~vA~~LGI--Pa~dV~gACST~~~AL~lAa~lI~SG~ad~VLVV~Ssh~s~aerq--------fr-----~P~eyg~  156 (337)
T PRK08304         92 SANFAARELGI--PFLGLYGACSTMMESLALGSMLIDGGFADRVLAATSSHFATAERQ--------FR-----FPTEYGG  156 (337)
T ss_pred             hHHHHHHHhCC--cEEEEeccCHHHHHHHHHHHHHHhcCCCCEEEEEEcchhhhhhhh--------cc-----Cchhccc
Confidence            57778888876  999999999 99999999999999999999999999974444321        11     121  22


Q ss_pred             CCCccCCCCCceecceeeEEeecch
Q psy5293         101 SRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus       101 ~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                      -+|..    -....+|+++.++.+.
T Consensus       157 qrp~t----aqwtvtGAGA~i~~~~  177 (337)
T PRK08304        157 QRPPT----AQWTVTGAGAVLLSRE  177 (337)
T ss_pred             cCCCc----ceEEeeccEEEEEecC
Confidence            23322    2336778999988754

>PLN03172 chalcone synthase family protein; Provisional

Probab=98.52  E-value=1.5e-06  Score=84.06  Aligned_cols=244  Identities=14%  Similarity=0.118  Sum_probs=132.2

Q ss_pred             CCChHHHHHHHHHcCCCcc---ceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQ---TLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp---~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|++  +.+++..||++.-   .+.++.+| +++.+|..|.++++++..+.+||+++|.++..+          ..    
T Consensus       137 ~P~~--a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~----  200 (393)
T PLN03172        137 MPGA--DYQLTKLLGLKPSVKRFMMYQQGCFAGGTVLRLAKDLAENNAGSRVLVVCSEITAVTF----------RG----  200 (393)
T ss_pred             CchH--HHHHHHHhCCCCCceEEeeeCCchHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhhh----------cc----
Confidence            5655  8899999999863   35678999 999999999999999999999999999733111          00    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                        ++.  +..+.-....++|||+++++++......  ..++.-.+.+......       ...++.+.+           
T Consensus       201 --~~d--~~~~~~v~~~LFGDGAaAvVl~~~~~~~--~~~~~~~i~~~~~~~~-------~~t~~~~~~-----------  256 (393)
T PLN03172        201 --PSD--THLDSLVGQALFGDGAAAVIIGADPDTK--IERPLFEIVSAAQTIL-------PDSDGAIDG-----------  256 (393)
T ss_pred             --ccc--ccHHhhhccchhcCceEEEEEecCCCCc--ccCceeEEeeeccEEe-------cCCcccccc-----------
Confidence              000  0001112356789999999998632210  0111112332210000       000000000           


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCc
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPL  254 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~  254 (359)
                               ...-.|..             +..     ....|........+.+.+.|++.+++..||+++..|=-+   
T Consensus       257 ---------~i~~~G~~-------------~~l-----~~~vp~~~~~~i~~~~~~~L~~~gl~~~di~~~~~Hqgg---  306 (393)
T PLN03172        257 ---------HLREVGLT-------------FHL-----LKDVPGLISKNIEKSLVEAFAPIGINDWNSIFWIAHPGG---  306 (393)
T ss_pred             ---------eEEcCCcE-------------EEE-----echHHHHHHHHHHHHHHHHhhhcCCCccccceEEecCCc---
Confidence                     00000000             000     011121222455667788999999999999998888544   


Q ss_pred             ccHHHHHHHHhhcC--CCCceec-ccccccchHHHhHHHHHHHHHHHH-HhcCCCCCCCCCCCCCccCCCCCCCCccccc
Q psy5293         255 GDVIELKAIGSLFP--AQRLMVS-STKGAHGHLLGAAGNLESAFTILA-VHEGLVPPNVNLEDPCEEAGGYECPTAVTEW  330 (359)
Q Consensus       255 ~d~~E~~al~~~~~--~~~~~v~-~~k~~~Gh~~~AsG~~~~~~~~~~-l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~  330 (359)
                        ..-++++.+.++  ..++..+ ..-...|++-+||=+.-+-++... ++++.                      ..  
T Consensus       307 --~~Il~~v~~~Lgl~~~~~~~s~~vl~~yGNtSSaSv~~vL~~~~~~~~~~g~----------------------~~--  360 (393)
T PLN03172        307 --PAILDQVEIKLDLKEEKLRATRHVLSDYGNMSSACVLFILDEMRKKSIEEGK----------------------GS--  360 (393)
T ss_pred             --HHHHHHHHHHcCCCHHHHHHHHHHHHHhCccHHhHHHHHHHHHHhhhhhcCC----------------------CC--
Confidence              445555666655  1222111 112234888777633333222110 11111                      00  


Q ss_pred             ccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         331 KTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       331 ~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      +.++...++..+||.|=+...++|+..+
T Consensus       361 ~G~~~~~~ll~afGpG~t~~~~ll~~~~  388 (393)
T PLN03172        361 TGEGLEWGVLFGFGPGLTVETVVLHSVP  388 (393)
T ss_pred             CCCCcceEEEEEeCCcceeeeeeeEecc
Confidence            0012368899999998888888888753

>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs

Probab=98.52  E-value=1.5e-06  Score=83.44  Aligned_cols=87  Identities=14%  Similarity=0.156  Sum_probs=64.5

Q ss_pred             cCCChHHHHHHHHHcCCCc--cceecc-ccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccC
Q psy5293          18 FFPNMVPAGAISIDMDSKV--QTLCVY-CLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQF   93 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~g--p~~~v~-~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~   93 (359)
                      ..|+.  +.+|...+|++.  +.+.|. .+| +++.||..|..+|++|..+.+||+++|.+....           .   
T Consensus       119 ~~P~~--a~~i~~~lgl~~~~~~~dv~~~~C~~~~~al~~A~~~~~~~~~~~aLvv~~e~~s~~~-----------~---  182 (361)
T cd00831         119 PTPSL--DAMLINRLGLRPDVKRYNLGGMGCSAGAIALDLAKDLLEANPGARVLVVSTELCSLWY-----------R---  182 (361)
T ss_pred             CCCCH--HHHHHHHhCCCcccchhccccccchhHHHHHHHHHHHHHHCCCCEEEEEEeeccccee-----------C---
Confidence            34555  789999999973  788998 899 999999999999999999999999999733211           0   


Q ss_pred             CCCCCCCCCCccCCCCCceecceeeEEeecchH
Q psy5293          94 NNEPAQASRPFDKRRDGFVMGEGSAILVLEELD  126 (359)
Q Consensus        94 ~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~  126 (359)
                         ++.   ..+..-...++|||++|+++++..
T Consensus       183 ---~~d---~~~~~~~~~lfGDgaaA~ll~~~~  209 (361)
T cd00831         183 ---GPD---HRSMLVGNALFGDGAAAVLLSNDP  209 (361)
T ss_pred             ---CCC---cHHHhhhhhhccCCceEEEEEcCC
Confidence               000   000001356789999999998643

PKS generate an array of different products, dependent on the nature of the starter molecule. They share a common chemical strategy, after the starter molecule is loaded onto the active site cysteine, a carboxylative condensation reation extends the polyketide chain. Plant-specific PKS are dimeric iterative PKSs, using coenzyme A esters to deliver substrate to the active site, but they differ in the choice of starter molecule and the number of condensation reactions.

>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade

Probab=98.46  E-value=1.7e-05  Score=76.59  Aligned_cols=50  Identities=10%  Similarity=-0.040  Sum_probs=46.8

Q ss_pred             HHHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCC
Q psy5293          24 PAGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAES   73 (359)
Q Consensus        24 ~a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~   73 (359)
                      .+.+|...||+++  +.+.+.++| +++.||..|.++|++|..+.+||+++|.
T Consensus        86 ~a~~v~~~Lgl~~~~~~~dv~~aC~gg~~aL~~A~~~i~s~~~~~aLVv~~D~  138 (379)
T TIGR01835        86 AAVYVHGLLGLQPFCRSFELKQACYGATAALQMAKGHVALSPDRKVLVIASDI  138 (379)
T ss_pred             HHHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCeEEEEEeeh
Confidence            4889999999974  889999999 9999999999999999999999999995

This clade of hydroxymethylglutaryl-CoA (HMG-CoA) synthases is found in a limited spectrum of mostly gram-positive bacteria which make isopentenyl pyrophosphate (IPP) via the mevalonate pathway. This pathway is found primarily in eukaryotes and archaea, but the bacterial homologs are distinct, having aparrently diverged after being laterally transferred from an early eukaryote. HMG-CoA synthase is the first step in the pathway and joins acetyl-CoA with acetoacetyl-CoA with the release of one molecule of CoA. The Borellia sequence may have resulted from a separate lateral transfer event.

>PLN03170 chalcone synthase; Provisional

Probab=98.41  E-value=2.7e-06  Score=82.57  Aligned_cols=242  Identities=13%  Similarity=0.142  Sum_probs=133.9

Q ss_pred             CCChHHHHHHHHHcCCCcc---ceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQ---TLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp---~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|++  +.+|...||++.-   .+.+..+| +++.+|..|.++++++..+.|||+++|.+...+           .    
T Consensus       141 ~Ps~--a~~l~~~LGl~~~~~r~~d~~~gC~G~~~aL~~A~~l~~~~~~~~vLVV~~E~~S~~~-----------~----  203 (401)
T PLN03170        141 MPGA--DYQLTKMLGLRPSVNRLMMYQQGCFAGGTVLRVAKDLAENNRGARVLVVCSEITAVTF-----------R----  203 (401)
T ss_pred             CChH--HHHHHHHhCcCcccHHHHhhcChhHHHHHHHHHHHHHHHcCCCCeEEEEEEehhhhcc-----------C----
Confidence            5665  8899999999763   68899999 999999999999999999999999999733111           0    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                       +|+.  ..++......++|||++|++++.....  .......++.....                  .+-|... ..+.
T Consensus       204 -~~~~--~~~~~~~~~~LFGDGAaAvVl~~~~~~--~~~~~~~~l~~~~~------------------~~~p~~~-~~~~  259 (401)
T PLN03170        204 -GPSE--SHLDSMVGQALFGDGAAAVIVGADPDE--RVERPLFQLVSASQ------------------TILPDSE-GAID  259 (401)
T ss_pred             -Cccc--chhhhhhhhhhhhceeEEEEEecCCcc--cccCCceEEeeccc------------------eEecCCc-cccc
Confidence             0110  001222234678999999999863211  00011112222110                  0000000 0000


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCcc--CCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCC
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHH--LTSPREDGRGALLAMTRALIDANLSPGDISYINAHATST  252 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~--~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t  252 (359)
                          ..                        +...+-...  ...|........+.+.+.|++++++++||+++..|=-+.
T Consensus       260 ----~~------------------------i~~~G~~~~l~~~vp~~~~~~i~~~v~~~L~~~gl~~~di~~~v~Hqgg~  311 (401)
T PLN03170        260 ----GH------------------------LREVGLTFHLLKDVPGLISKNIERSLEEAFKPLGITDYNSIFWVAHPGGP  311 (401)
T ss_pred             ----ce------------------------EEcCCeEEEEehHHHHHHHHHHHHHHHHHHHhcCCCccccCeEEecCCcH
Confidence                00                        000000000  001112224556678899999999999999888885443


Q ss_pred             CcccHHHHHHHHhhcC--CCCcee-cccccccchHHHhHHHHHHHHHHHH-HhcCCCCCCCCCCCCCccCCCCCCCCccc
Q psy5293         253 PLGDVIELKAIGSLFP--AQRLMV-SSTKGAHGHLLGAAGNLESAFTILA-VHEGLVPPNVNLEDPCEEAGGYECPTAVT  328 (359)
Q Consensus       253 ~~~d~~E~~al~~~~~--~~~~~v-~~~k~~~Gh~~~AsG~~~~~~~~~~-l~~~~ip~~~~~~~~~~~~~~~~~~~~~~  328 (359)
                           .-++++.+.++  ..++.. ...-..+||+-+|+=+.-+-++... +++|.+.                      
T Consensus       312 -----~il~~v~~~Lgl~~~~~~~s~~~l~~~GNtsSasv~~vL~~~~~~~~~~g~~~----------------------  364 (401)
T PLN03170        312 -----AILDQVEAKVGLEKERMRATRHVLSEYGNMSSACVLFILDEMRKRSAEDGQAT----------------------  364 (401)
T ss_pred             -----HHHHHHHHHcCCChHHHHHHHHHHHHhCccHHhHHHHHHHHHHHhHhhcCCCC----------------------
Confidence                 34455555554  122211 0112245888888744444443221 1211110                      


Q ss_pred             ccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         329 EWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       329 ~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                        +.++.+.++..+||.|=+-..++|++.+
T Consensus       365 --~G~~~~~~ll~afGpG~t~~~~ll~~~~  392 (401)
T PLN03170        365 --TGEGFDWGVLFGFGPGLTVETVVLHSVP  392 (401)
T ss_pred             --CCCCccEEEEEEeCchHhHHhHHheecc
Confidence              1011367899999988888888888754

>PLN02854 3-ketoacyl-CoA synthase

Probab=98.40  E-value=1.2e-05  Score=79.79  Aligned_cols=83  Identities=14%  Similarity=0.091  Sum_probs=65.0

Q ss_pred             cCCChHHHHHHHHHcCCC-c-cceecc-ccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccC
Q psy5293          18 FFPNMVPAGAISIDMDSK-V-QTLCVY-CLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQF   93 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~-g-p~~~v~-~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~   93 (359)
                      .+|++  +..|...+|++ . .++.++ .+| +++.+|..|.++|+++....+||+++|.++ .. ++            
T Consensus       222 p~PSl--Aa~I~n~LGlr~~i~afdLsgmGCSggl~aL~lA~~lL~~~~~~~aLVVstE~~S-~~-~y------------  285 (521)
T PLN02854        222 PTPSL--SAMIVNHYKLRTDIKSYNLGGMGCSAGLISIDLANDLLKANPNSYAVVVSTENIT-LN-WY------------  285 (521)
T ss_pred             CCCCH--HHHHHHHhCCCCCceEEecccchhhhHHHHHHHHHHHHHhCCCCeEEEEEEeeee-cC-CC------------
Confidence            46676  99999999997 3 789998 899 999999999999999999999999999743 11 00            


Q ss_pred             CCCCCCCCCCccCCCC---CceecceeeEEeecch
Q psy5293          94 NNEPAQASRPFDKRRD---GFVMGEGSAILVLEEL  125 (359)
Q Consensus        94 ~~~~~~~~~~fd~~~~---G~~~geGa~a~~l~~~  125 (359)
                         +      -+++..   ..++++|++|++|++.
T Consensus       286 ---~------g~Drs~lv~~~LFgDGAAAvlLs~~  311 (521)
T PLN02854        286 ---F------GNDRSMLLCNCIFRMGGAAVLLSNK  311 (521)
T ss_pred             ---C------CCchhhhcceeeeccceeEEEEecc
Confidence               0      011222   4678999999999863

>PLN03169 chalcone synthase family protein; Provisional

Probab=98.35  E-value=3.9e-06  Score=81.39  Aligned_cols=88  Identities=13%  Similarity=0.178  Sum_probs=64.8

Q ss_pred             cCCChHHHHHHHHHcCCCc---cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccC
Q psy5293          18 FFPNMVPAGAISIDMDSKV---QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQF   93 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~g---p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~   93 (359)
                      .+|.+  +.+|...||++.   ..+.+..+| +++.+|..|.++|++|..+.+||+++|.....+           .   
T Consensus       140 ~~P~~--a~~l~~~LGl~~~~~~~~d~~~gC~g~~~aL~~A~~~~~~~~~~~vLvv~~e~~s~~~-----------~---  203 (391)
T PLN03169        140 RLPGG--DLYLAKQLGLSPDVQRVMLYFLGCSGGVAGLRVAKDIAENNPGSRVLLTTSETTILGF-----------R---  203 (391)
T ss_pred             CCCcH--HHHHHHHhCcCCcceeeecccChhHHHHHHHHHHHHHHHhCCCCeEEEEEEEcChhhc-----------c---
Confidence            35555  889999999975   357899999 999999999999999999999999999721111           0   


Q ss_pred             CCCCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          94 NNEPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        94 ~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                        .+.. .+ +++.....++|||++|++++..
T Consensus       204 --~~~~-~~-~~d~~~~~lFGDGAaA~vl~~~  231 (391)
T PLN03169        204 --PPSP-DR-PYDLVGAALFGDGAAAVIIGAD  231 (391)
T ss_pred             --CCCc-cc-hhhhhhhhhccCceEEEEEecC
Confidence              0000 01 2233345679999999999863

>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2

Probab=98.35  E-value=6.7e-07  Score=82.02  Aligned_cols=54  Identities=30%  Similarity=0.286  Sum_probs=46.5

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCH
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQ   77 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~   77 (359)
                      ++.+++...|+.  .|.++|+++| ||++||.+|++.|++|++|++|+||+|+|+..
T Consensus        65 ~ar~~~l~aGl~~~vp~~~V~~~CaSG~~Av~~a~~~I~sG~~dvvlagGvE~mS~~  121 (264)
T PF00108_consen   65 IARQAALAAGLPESVPATTVNRACASGLQAVHLAAMAIASGEADVVLAGGVESMSRV  121 (264)
T ss_dssp             HHHHHHHHTTS-TTSEEEEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEETTTS
T ss_pred             hhhhhhhhcccccccceeeehhhhhHHHHHHHHhhhhhcCCCccEEEEecccccccc
Confidence            678888888884  4999999999 99999999999999999999999999996654

3.1.9 from EC) and 3-ketoacyl-CoA thiolase (2.3.1.16 from EC). 3-ketoacyl-CoA thiolase (also called thiolase I) has a broad chain-length specificity for its substrates and is involved in degradative pathways such as fatty acid beta-oxidation. Acetoacetyl-CoA thiolase (also called thiolase II) is specific for the thiolysis of acetoacetyl-CoA and involved in biosynthetic pathways such as poly beta-hydroxybutyrate synthesis or steroid biogenesis. In eukaryotes, there are two forms of 3-ketoacyl-CoA thiolase: one located in the mitochondrion and the other in peroxisomes. There are two conserved cysteine residues important for thiolase activity. The first located in the N-terminal section of the enzymes is involved in the formation of an acyl-enzyme intermediate; the second located at the C-terminal extremity is the active site base involved in deprotonation in the condensation reaction. Mammalian nonspecific lipid-transfer protein (nsL-TP) (also known as sterol carrier protein 2) is a protein which seems to exist in two different forms: a 14 Kd protein (SCP-2) and a larger 58 Kd protein (SCP-x). The former is found in the cytoplasm or the mitochondria and is involved in lipid transport; the latter is found in peroxisomes. The C-terminal part of SCP-x is identical to SCP-2 while the N-terminal portion is evolutionary related to thiolases [].; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008152 metabolic process; PDB: 1PXT_B 1AFW_B 1WL4_A 1WL5_A 4E1L_B 1WDK_D 1WDM_D 2D3T_D 1WDL_C 2WUA_B ....

>PLN03171 chalcone synthase-like protein; Provisional

Probab=98.35  E-value=7e-06  Score=79.79  Aligned_cols=87  Identities=17%  Similarity=0.207  Sum_probs=63.5

Q ss_pred             CCChHHHHHHHHHcCCCcc---ceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQ---TLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp---~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|++  +.++...||++.-   .+.+.++| +++.+|..|.++|++|.++.+||+++|.+....           .    
T Consensus       143 ~P~~--a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~li~~~~~~~vLVv~~e~~s~~~-----------~----  205 (399)
T PLN03171        143 IPGV--DFRLVPLLGLRPSVRRTMLHLNGCFAGAAALRLAKDLAENNRGARVLVVAAEITLLLF-----------N----  205 (399)
T ss_pred             CCch--HHHHHHHhCCCcccceeeccCCccHHHHHHHHHHHHHHHhCCCCeEEEEEEecccccc-----------C----
Confidence            5665  8899999999752   45677799 999999999999999999999999999722111           0    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                       .++..  .++..-.+.++|||++++++++.
T Consensus       206 -~~d~~--~~~~~v~~~LFGDGAaA~vl~~~  233 (399)
T PLN03171        206 -GPDEG--CFQTLLNQGLFGDGAAAVIVGAD  233 (399)
T ss_pred             -CCCcc--cHHhhhccccccCccEEEEEecC
Confidence             01110  01111236789999999999864

>PRK12404 stage V sporulation protein AD; Provisional

Probab=98.31  E-value=4.7e-06  Score=76.84  Aligned_cols=52  Identities=15%  Similarity=0.287  Sum_probs=45.3

Q ss_pred             HHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCH
Q psy5293          24 PAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQ   77 (359)
Q Consensus        24 ~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~   77 (359)
                      ++..++..+|  -|.+.|+++| |+..||..|..+|++|.+|.+||+-+....+.
T Consensus        90 pssfvar~LG--IP~~gV~gACSTg~eAL~lAa~~VaSG~Ad~VLavtsSH~~~a  142 (334)
T PRK12404         90 PTSFAARTLG--IPYLGLFGACSTSMEGLALAALIVNSGGAKYVLTGASSHNAAV  142 (334)
T ss_pred             cHHHHHHHhC--CCccceeecCHHHHHHHHHHHHHHHcCCCCEEEEEeCcccchh
Confidence            6667888887  6789999999 99999999999999999999999987764433

>PLN03173 chalcone synthase; Provisional

Probab=98.31  E-value=8.5e-06  Score=78.87  Aligned_cols=86  Identities=14%  Similarity=0.231  Sum_probs=62.8

Q ss_pred             CCChHHHHHHHHHcCCCcc---ceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQ---TLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp---~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|+.  +.+|+..||++.-   .+.+..+| +++.+|..|.++++++..+.+||+++|.++..+          ..    
T Consensus       137 ~P~~--a~~l~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~~~~~~~~~vLVV~~E~~S~~~----------~~----  200 (391)
T PLN03173        137 MPGA--DYQLTKLLGLRSSVKRFMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEITAVTF----------RG----  200 (391)
T ss_pred             ccHH--HHHHHHHhCCCccceeeehhcCccHHHHHHHHHHHHHHHhCCCCeEEEEEEehhhhhh----------CC----
Confidence            4554  8899999999863   56789999 999999999999999999999999999732111          00    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecc
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEE  124 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~  124 (359)
                        ++.  +..+......++|||+++++++.
T Consensus       201 --~~d--~~~~~~v~~~LFGDGAaAvvl~~  226 (391)
T PLN03173        201 --PSD--THLDSLVGQALFGDGAAAIIIGS  226 (391)
T ss_pred             --ccc--cchhhhhhhhhhcCceEEEEEeC
Confidence              100  00111123467899999999975

>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism]

Probab=98.30  E-value=6.4e-05  Score=70.90  Aligned_cols=189  Identities=19%  Similarity=0.164  Sum_probs=114.4

Q ss_pred             HHHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCC
Q psy5293          24 PAGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQA  100 (359)
Q Consensus        24 ~a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~  100 (359)
                      .+..|+..+|++-  -++.+..+| +|..||.+|..+|.+|..+.+||+|.|....           .        |.  
T Consensus        90 ~at~v~~~lg~~~~~~~~d~~~AC~agT~aL~~a~~~v~s~~~~~~LvI~sD~a~~-----------~--------~~--  148 (377)
T COG3425          90 TATIVAEALGLNPSARAADVEFACYAGTAALQAAIGWVESGMISYGLVIGADTAQY-----------A--------PG--  148 (377)
T ss_pred             hHHHHHHHhCCCCceehhhHHHHHHHHHHHHHHHHHHHHcCCccceEEEeehhhcc-----------C--------CC--
Confidence            5788999999975  566678899 9999999999999999999999999995110           0        10  


Q ss_pred             CCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhh
Q psy5293         101 SRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQ  180 (359)
Q Consensus       101 ~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~  180 (359)
                            +..-+..|.|+.|+++..-       ..+.+.+.+.+           .+.++.++.++|..-+ +-.      
T Consensus       149 ------~~~E~t~GAGavA~lIg~n-------~~~~a~~~~~~-----------syt~d~~DFwRp~~~~-yp~------  197 (377)
T COG3425         149 ------DALEYTAGAGAVAFLIGKN-------PPIVAEFEGTG-----------SYTTDTPDFWRPDGQP-YPY------  197 (377)
T ss_pred             ------cccCccCCCceEEEEEccC-------CCeEEEecCce-----------EEecCCCcccccCCCc-ccc------
Confidence                  0122446888888888652       22223332222           1112333444442210 000      


Q ss_pred             hHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHH
Q psy5293         181 ISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIEL  260 (359)
Q Consensus       181 ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~  260 (359)
                                                +  ++ +...|. =......+++..+++.+++++|+|++..|-..+.+.    .
T Consensus       198 --------------------------~--dg-~~s~~~-Y~~~~~~a~~~~~~k~gls~~dfdy~vfH~P~~k~~----~  243 (377)
T COG3425         198 --------------------------V--DG-RFSEPA-YFKHVENAAKGYMEKTGLSPDDFDYIVFHQPNGKFP----K  243 (377)
T ss_pred             --------------------------c--Cc-eecHHH-HHHHHHHHHHHHHHHhCCChhhhCeEEecCCCCchH----H
Confidence                                      0  00 000000 014556788888999999999999999999887632    2


Q ss_pred             HHHHhhcC-CCCceecccc-cccchHHHhHHHHHHHHHHH
Q psy5293         261 KAIGSLFP-AQRLMVSSTK-GAHGHLLGAAGNLESAFTIL  298 (359)
Q Consensus       261 ~al~~~~~-~~~~~v~~~k-~~~Gh~~~AsG~~~~~~~~~  298 (359)
                      .++....- ..++.-+-.- ..+|.+..+|..+.++.++.
T Consensus       244 ka~k~l~~~~e~v~~~l~~~~~vGN~YtgS~~L~Las~L~  283 (377)
T COG3425         244 KAAKSLGFKEEQVKPGLVYPQRIGNTYTGSLLLGLASLLD  283 (377)
T ss_pred             HHHHHhCccHhhcCccchhhhhcCcccchhHHHHHHHHHh
Confidence            23322221 1222112222 25799999998888877655

>PLN03168 chalcone synthase; Provisional

Probab=98.22  E-value=1.9e-05  Score=76.42  Aligned_cols=87  Identities=17%  Similarity=0.241  Sum_probs=65.5

Q ss_pred             CCChHHHHHHHHHcCCCc---cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKV---QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~g---p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|++  +.+|+..||++.   ..+.++.+| +++.+|..|.++|++|....|||+++|.++..+           .    
T Consensus       136 ~Ps~--a~~l~~~LGl~~~~~r~~d~~~gC~g~~~aL~~A~~~i~~~~~~~VLVV~~E~~S~~~-----------~----  198 (389)
T PLN03168        136 MPGA--DHALAKLLGLKPTVKRVMMYQTGCFGGASVLRVAKDLAENNKGARVLAVASEVTAVTY-----------R----  198 (389)
T ss_pred             CccH--HHHHHHHhCcCCcceeeeeeCCccHHHHHHHHHHHHHHHhCCCCEEEEEEEehhhhhc-----------c----
Confidence            5676  899999999976   368899999 999999999999999999999999999733211           0    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                       .++.  ...+......++|||++|++++..
T Consensus       199 -~~~~--~~~~~~~~~~LFGDGAaAvvl~~~  226 (389)
T PLN03168        199 -APSE--NHLDGLVGSALFGDGAGVYVVGSD  226 (389)
T ss_pred             -Cccc--ccHHHHhccccccCccEEEEEecC
Confidence             0100  001112345778999999999863

>PLN02377 3-ketoacyl-CoA synthase

Probab=98.01  E-value=0.00035  Score=69.31  Aligned_cols=82  Identities=13%  Similarity=0.179  Sum_probs=65.0

Q ss_pred             cCCChHHHHHHHHHcCCCc--cceecc-ccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccC
Q psy5293          18 FFPNMVPAGAISIDMDSKV--QTLCVY-CLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQF   93 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~g--p~~~v~-~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~   93 (359)
                      .+|++  +..|...+|++.  +++.++ .+| +++.+|..|.++|+++....+||+++|.++..+.              
T Consensus       206 ~~PSl--aa~V~~~LGlr~~v~afdL~gmGCsggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~--------------  269 (502)
T PLN02377        206 PTPSL--SAMIVNKYKLRGNIRSFNLGGMGCSAGVIAVDLAKDMLQVHRNTYAVVVSTENITQNWY--------------  269 (502)
T ss_pred             CCCcH--HHHHHHHhCCCCCCeEEecccchhhHHHHHHHHHHHHHHcCCCCEEEEEEEeccccccC--------------
Confidence            45666  999999999974  899999 699 9999999999999999999999999997332110              


Q ss_pred             CCCCCCCCCCccCCCC----CceecceeeEEeecch
Q psy5293          94 NNEPAQASRPFDKRRD----GFVMGEGSAILVLEEL  125 (359)
Q Consensus        94 ~~~~~~~~~~fd~~~~----G~~~geGa~a~~l~~~  125 (359)
                                +++++.    ..++++|++|++|+..
T Consensus       270 ----------~~d~~s~lv~n~LFgDGAaAvlLs~~  295 (502)
T PLN02377        270 ----------FGNKKSMLIPNCLFRVGGSAVLLSNK  295 (502)
T ss_pred             ----------CCCCccccccceeeccccEEEEEecc
Confidence                      111222    3668999999999863

>PLN02577 hydroxymethylglutaryl-CoA synthase

Probab=97.84  E-value=0.00083  Score=66.08  Aligned_cols=55  Identities=11%  Similarity=0.035  Sum_probs=45.5

Q ss_pred             ccCCChHHHHHHH---HHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCC--CEEEEeeeCC
Q psy5293          17 PFFPNMVPAGAIS---IDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHA--DVMIAGAAES   73 (359)
Q Consensus        17 ~~~~~~~~a~~ia---~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~--d~~lvgg~e~   73 (359)
                      ..++++  +.+|.   ..+|.+. +++.+..+| +++.||..|.++|++|..  +.+||+|+|.
T Consensus        87 d~~ps~--A~~v~~ll~~LG~~~~~afDi~~AC~G~~~AL~~A~~~i~sg~~~~~~aLVV~aD~  148 (459)
T PLN02577         87 DKSKSI--KTFLMQLFEESGNTDIEGVDSTNACYGGTAALLNCVNWVESSSWDGRYGLVVAADS  148 (459)
T ss_pred             CCCCch--HHHHHHHHHHhCCCCcEEeehhhhhHHHHHHHHHHHHHHHcCCCCCCeEEEEEech
Confidence            345665  66665   4566654 889999999 999999999999999985  9999999996

>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways

Probab=97.78  E-value=1.3e-05  Score=59.54  Aligned_cols=63  Identities=22%  Similarity=0.266  Sum_probs=46.2

Q ss_pred             eeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCCCCccCCCCCceeccee
Q psy5293          39 LCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGS  117 (359)
Q Consensus        39 ~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa  117 (359)
                      +.|+++| +.+.||..|..+|++|+++.+||++.|.......                        +.+....+++|+|+
T Consensus         1 fDi~~~C~g~~~al~~A~~~i~~g~~~~~Lvv~~d~~s~~~~------------------------~~~~~~~~~~gDgA   56 (80)
T PF08545_consen    1 FDINQACAGFLYALDVAAALIASGRAKNALVVGGDRLSRIVD------------------------RTDRQTAFIFGDGA   56 (80)
T ss_dssp             EEEE-GGGHHHHHHHHHHHHHHTTS-SEEEEEEEEEGGGGSH------------------------TTHHHHHTTB-EEE
T ss_pred             CcccccchHHHHHHHHHHHHHhhccCCEEEEEeecccccccc------------------------ccccCcceeecchh
Confidence            4678999 9999999999999999999999999997322110                        01122345689999


Q ss_pred             eEEeecch
Q psy5293         118 AILVLEEL  125 (359)
Q Consensus       118 ~a~~l~~~  125 (359)
                      +++++++.
T Consensus        57 aA~vl~~~   64 (80)
T PF08545_consen   57 AAVVLSRD   64 (80)
T ss_dssp             EEEEEEEE
T ss_pred             eEEEEEec
Confidence            99999875

The FAS I pathway, which generally only produces palmitate, is found in eukaryotes and is performed either by a single polypeptide which contains all the reaction centres needed to form a fatty acid, or by two polypeptides which interact to form a multifunctional complex. The FAS II pathway, which is capable of producing many different fatty acids, is found in mitochondria, bacteria, plants and parasites, and is performed by many distinct proteins, each of which catalyses a single step within the pathway. The large diversity of products generated by this pathway is possible because the acyl carrier protein (ACP) intermediates are diffusible entities that can be diverted into other biosynthetic pathways []. 3-Oxoacyl-[acyl carrier protein (ACP)] synthase III catalyses the first condensation step within the FAS II pathway, using acetyl-CoA as the primer and malonyl-ACP as the acceptor, as shown below. Acyl-[ACP] + malonyl-[ACP] = 3-oxoacyl-[ACP] + CO(2) + [ACP] The oxoacyl-ACP formed by this reaction subsequently enters the elongation cycle, where the acyl chain is progressively lengthened by the combined activities of several enzymes. The enzymes studied so far are homodimers, where each monomer consists of two domains (N-terminal and C-terminal) which are similar in structure, but not in sequence [, ]. This entry represents a conserved region within the N-terminal domain.; GO: 0004315 3-oxoacyl-[acyl-carrier-protein] synthase activity, 0006633 fatty acid biosynthetic process; PDB: 1ZOW_C 1UB7_B 3IL7_A 3IL3_A 2X3E_B 4DFE_C 3LED_B 3ROW_B 3S23_A 3S1Z_A ....

>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism]

Probab=97.64  E-value=1.2e-06  Score=84.60  Aligned_cols=73  Identities=42%  Similarity=0.704  Sum_probs=60.1

Q ss_pred             EEEEeecccccchhhhh-hhhhhcccccc-cCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccccccc
Q psy5293         136 YAEIIGYGMIDLSDVLS-SNNALQGSYNK-LSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS  208 (359)
Q Consensus       136 ~~~i~g~~~~~~~~~~~-~~~~~~~~~~~-~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~  208 (359)
                      .+++.|.+....+.... .....++.... ++|+..++.++++.+..+++++|++||+++++++|++|+++|+..
T Consensus        98 ~gv~iGsg~gg~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~vs~~~g~~G~~~~~~tACatg~~AIg~A  172 (412)
T COG0304          98 VGVAIGSGIGGLEDIEFDLDALLLEGLRKRISPFLVPKMLPNLAAGNVAIVFGLKGPNYTPVTACATGAHAIGDA  172 (412)
T ss_pred             EEEEEeccCCCcchhhhHHHHHHhcCCccCcCchhhhhhccchHHHHHHHHhCCCCCcCChhhhHHhHHHHHHHH
Confidence            47888888777766543 33333444444 899999999999999999999999999999999999999999983

>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade

Probab=97.63  E-value=0.0046  Score=60.86  Aligned_cols=54  Identities=11%  Similarity=0.058  Sum_probs=44.3

Q ss_pred             cCCChHHHHHHHHHcC---CCc-cceeccccc-HHHHHHHHHHHHHHcCCC--CEEEEeeeCC
Q psy5293          18 FFPNMVPAGAISIDMD---SKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHA--DVMIAGAAES   73 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g---~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~--d~~lvgg~e~   73 (359)
                      ..+++  +..|...|+   .+. .++.+.++| ++..||..|..+|++|..  +.+||++.|.
T Consensus        85 ~sps~--a~~v~~lL~~lG~~~~~~fDi~~AC~G~t~AL~~A~~~i~s~~~~~~~aLVV~sDi  145 (454)
T TIGR01833        85 KSKSV--KTVLMQLFEESGNTDVEGIDTTNACYGGTAALFNAINWIESSSWDGRYALVVAGDI  145 (454)
T ss_pred             CCCch--HHHHHHHHHhcCCCCceEEeccccchhHHHHHHHHHHHHHcCCcCCCeEEEEEecc
Confidence            34554  777777554   443 788999999 999999999999999974  8999999996

Hydroxymethylglutaryl(HMG)-CoA synthase is the first step of isopentenyl pyrophosphate (IPP) biosynthesis via the mevalonate pathway. This pathway is found mainly in eukaryotes, but also in archaea and some bacteria. This model is specific for eukaryotes.

>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain

Probab=97.57  E-value=0.00018  Score=63.63  Aligned_cols=67  Identities=18%  Similarity=0.082  Sum_probs=62.6

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCC
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCIS   76 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~   76 (359)
                      +.++|..|..++.|+ ++|++++..+.++|+++|..+- |...||..|+..+..| ++-||++.+|....
T Consensus        78 ~~lSPT~Fs~SVHNA-~aG~~sI~~~~~~~~tal~a~~~sf~~aLleA~~~l~~~-~~~VLlv~~De~~p  145 (218)
T PF13723_consen   78 EELSPTAFSQSVHNA-AAGYWSIATKNTGPNTALAAGEDSFEAALLEAAAQLAEG-AEPVLLVCYDEPLP  145 (218)
T ss_pred             CCcCccchhhhhhhH-HHHHHHHHhCCCCceEEEecCcchHHHHHHHHHHHHHcC-CCCEEEEEeCCCCC
Confidence            359999999999999 9999999999999999999999 9999999999999999 89999999998443

>PLN02932 3-ketoacyl-CoA synthase

Probab=97.45  E-value=0.00048  Score=68.01  Aligned_cols=86  Identities=16%  Similarity=0.187  Sum_probs=66.2

Q ss_pred             cCCChHHHHHHHHHcCCC--ccceecc-ccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccC
Q psy5293          18 FFPNMVPAGAISIDMDSK--VQTLCVY-CLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQF   93 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~--gp~~~v~-~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~   93 (359)
                      .+|++  +.+|...+|++  .+++.++ .+| +++.+|..|.++|+++....+||+++|.++..+.              
T Consensus       182 ~~Psl--aa~V~~~lGlr~~i~~fdL~gmGCSggl~aL~lA~~ll~~~~~~~aLVVstE~~S~~~~--------------  245 (478)
T PLN02932        182 PTPSL--SSILVNKFKLRDNIKSLNLGGMGCSAGVIAIDAAKSLLQVHRNTYALVVSTENITQNLY--------------  245 (478)
T ss_pred             CCCcH--HHHHHHHhCCCCCceEEEeccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEeecccccC--------------
Confidence            56666  89999999996  3899999 899 9999999999999999999999999998332220              


Q ss_pred             CCCCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          94 NNEPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        94 ~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                         +.. .+  +..-...++++|++|++++..
T Consensus       246 ---~~d-~r--~~l~t~~LFgDGAAAvlLs~~  271 (478)
T PLN02932        246 ---LGN-NK--SMLVTNCLFRIGGAAILLSNR  271 (478)
T ss_pred             ---CCc-ch--hhhccceeecccceEEEEecc
Confidence               000 00  001235678999999999864

>PLN02192 3-ketoacyl-CoA synthase

Probab=97.33  E-value=0.00026  Score=70.25  Aligned_cols=55  Identities=15%  Similarity=0.069  Sum_probs=49.3

Q ss_pred             CCChHHHHHHHHHcCCCc--cceecc-ccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCC
Q psy5293          19 FPNMVPAGAISIDMDSKV--QTLCVY-CLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCI   75 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~g--p~~~v~-~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~   75 (359)
                      +|++  +..|.+.+|++.  +++.++ .+| +++.||..|.++|+++....+||+++|.++
T Consensus       211 ~PSl--aa~I~n~lGlr~~i~afdLsgmGCSggl~aLdlA~~lL~a~~~~~aLVVstE~~S  269 (511)
T PLN02192        211 TPSL--SAMVINHYKLRGNILSYNLGGMGCSAGLISIDLAKHLLQVHPNSYALVISMENIT  269 (511)
T ss_pred             CchH--HHHHHHHhCCCCCceEEEcccchhhhHHHHHHHHHHHHHcCCCCeEEEEEEEecc
Confidence            4555  889999999973  899999 699 999999999999999999999999999743

>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional

Probab=97.23  E-value=1.9e-05  Score=75.13  Aligned_cols=73  Identities=37%  Similarity=0.580  Sum_probs=55.1

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccC
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSG  209 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~  209 (359)
                      +++.|.+........+.+. ..++....++|++.+.+++|+.+.++++.+|++||+++++++|+||..+|+...
T Consensus        29 Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~~l~Gp~~ti~~aCaSg~~Al~~A~  102 (342)
T PRK14691         29 ATIIGAGIGGFPAIAHAVRTSDSRGPKRLSPFTVPSFLVNLAAGHVSIKHHFKGPIGAPVTACAAGVQAIGDAV  102 (342)
T ss_pred             EEEEecCcccHHHHHHHHHHHHhcCccccChhHHhhhhhhHHHHHHHHHhCCCCCccccccHhHHHHHHHHHHH
Confidence            4555554444333333222 223455678999999999999999999999999999999999999999988743

>PLN00415 3-ketoacyl-CoA synthase

Probab=96.56  E-value=0.0041  Score=60.96  Aligned_cols=83  Identities=17%  Similarity=0.213  Sum_probs=62.2

Q ss_pred             CCChHHHHHHHHHcCCC--ccceeccc-cc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSK--VQTLCVYC-LC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~--gp~~~v~~-ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|..  +.++...+|++  ...+.++. +| +++.+|..|.++++++....+||+++|.++..+ +              
T Consensus       169 ~Psl--aa~l~~~LGLr~~v~~~dL~gmGCsggv~aL~lA~~ll~a~~~~~aLVVs~E~~S~~~-~--------------  231 (466)
T PLN00415        169 NPSL--SSMIVNRYKLKTDVKTYNLSGMGCSAGAISVDLATNLLKANPNTYAVIVSTENMTLSM-Y--------------  231 (466)
T ss_pred             CchH--HHHHHHHhCCCCCceEEEeccccchHHHHHHHHHHHHHHhCCCCEEEEEEEecccccc-c--------------
Confidence            4554  88899999997  37888997 99 999999999999999999999999999733211 0              


Q ss_pred             CCCCCCCCCccCCC--CCceecceeeEEeecch
Q psy5293          95 NEPAQASRPFDKRR--DGFVMGEGSAILVLEEL  125 (359)
Q Consensus        95 ~~~~~~~~~fd~~~--~G~~~geGa~a~~l~~~  125 (359)
                      +.+       |...  ...++++|++|+++...
T Consensus       232 ~~~-------dr~~lv~n~LFgDGAAAvlLs~~  257 (466)
T PLN00415        232 RGN-------DRSMLVPNCLFRVGGAAVMLSNR  257 (466)
T ss_pred             CCC-------cHhHhccceeecccceEEEEecC
Confidence            000       1100  13568999999999863

>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long

Probab=96.40  E-value=0.0027  Score=58.06  Aligned_cols=52  Identities=21%  Similarity=0.326  Sum_probs=37.0

Q ss_pred             HHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCH
Q psy5293          24 PAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQ   77 (359)
Q Consensus        24 ~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~   77 (359)
                      .+...+..|  .-|-+-+..+| +...+|.+|..+|..|-+|.+|++.+....+.
T Consensus        87 ~s~f~ar~l--~iPf~GlygACST~~e~l~laa~~vdgg~a~~vla~tSSH~~tA  139 (329)
T PF07451_consen   87 SSSFAARDL--GIPFLGLYGACSTMMESLALAAMLVDGGFADYVLAATSSHFATA  139 (329)
T ss_dssp             HHHHHHHHH--T--EEEB--CCCHHHHHHHHHHHHHHTTS-SEEEEEEEE-CCHH
T ss_pred             HHHHHHHhc--CCCccchhhHHHHHHHHHHHHHHHHhCCCcceEEEEeccccchh
Confidence            444455544  45999999999 99999999999999999999999988764333

This is one of six proteins encoded by the spoVA operon, which is transcribed exclusively in the forespore at about the time of dipicolinic acid (DPA) synthesis in the mother cell. The functions of the proteins encoded by the spoVA operon are unknown, but it has been suggested they are involved in DPA transport during sporulation [].; PDB: 3LMA_D 3LM6_A.

>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II

Probab=96.30  E-value=0.00013  Score=73.46  Aligned_cols=72  Identities=32%  Similarity=0.487  Sum_probs=55.5

Q ss_pred             EEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS  208 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~  208 (359)
                      +++.|.+......+.+...........+.|+..+..+.++.+..++..+|++||+++++++|+|+..+|+..
T Consensus       230 GV~vGt~~g~~~~~~~~~~~l~~~~~~~~p~~~~~~~~n~~a~~ia~~~gl~Gp~~tistACASs~~Ai~~A  301 (540)
T PLN02787        230 GVLIGSAMGGMKVFNDAIEALRISYRKMNPFCVPFATTNMGSAMLAMDLGWMGPNYSISTACATSNFCILNA  301 (540)
T ss_pred             EEEEEeccchHHHHHHHHHHHhhccccCCcchhhhhcccHHHHHHHHHhCCCCCccccccccccHHHHHHHH
Confidence            777887755544433333222334556788888888899999999999999999999999999999988873

>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2

Probab=96.20  E-value=0.015  Score=43.86  Aligned_cols=87  Identities=26%  Similarity=0.264  Sum_probs=51.6

Q ss_pred             HHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCC
Q psy5293         232 LIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNV  309 (359)
Q Consensus       232 l~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~  309 (359)
                      |+++|++++|||++..|-.+..     -.+.+.+.++  ..+.+ ... ..+||+.+|+-...+..   .++++.+    
T Consensus         1 L~~~g~~~~did~~i~hq~~~~-----~~~~~~~~lgi~~~~~~-~~~-~~~Gn~~sa~~~~~L~~---~~~~g~~----   66 (90)
T PF08541_consen    1 LERAGLSPDDIDHFIPHQASKK-----ILDSIAKRLGIPPERFP-DNL-AEYGNTGSASIPINLAD---ALEEGRI----   66 (90)
T ss_dssp             HHHTT--GGGESEEEE-SSSHH-----HHHHHHHHHTS-GGGBE--TH-HHH-B-GGGHHHHHHHH---HHHTTSS----
T ss_pred             CccccCCHHHCCEEEeCCCCHH-----HHHHHHHHcCCcHHHHH-HHH-hccCcchhhhHHHHHHH---HHHcCCC----
Confidence            6889999999999998866543     2233444444  12222 233 55699999986555544   4443222    


Q ss_pred             CCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEe
Q psy5293         310 NLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~  355 (359)
                                           +  ..+..++.++|.|.+.++++++
T Consensus        67 ---------------------~--~Gd~vl~~~~G~G~~~~~~~~~   89 (90)
T PF08541_consen   67 ---------------------K--PGDRVLLVGFGAGFSWGAAVLR   89 (90)
T ss_dssp             ---------------------C--TTEEEEEEEEETTTEEEEEEEE
T ss_pred             ---------------------C--CCCEEEEEEEEhhheeEEEEEE
Confidence                                 1  1578888899999888888875

3.1.41 from EC, the enzyme responsible for initiating the chain of reactions of the fatty acid synthase in plants and bacteria. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0008610 lipid biosynthetic process; PDB: 3IL3_A 1ZOW_C 3GWE_B 3GWA_B 1UB7_B 3LED_B 2EBD_A 1HNJ_A 2EFT_B 1HN9_B ....

>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=96.18  E-value=0.0027  Score=61.76  Aligned_cols=51  Identities=27%  Similarity=0.392  Sum_probs=46.7

Q ss_pred             cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccccccc
Q psy5293         158 QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS  208 (359)
Q Consensus       158 ~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~  208 (359)
                      +..+..+.|++.+++++|..+.++++.+|++||+++++++|+||..+|++.
T Consensus       135 ~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~Gp~~ti~~acaSg~~Ai~~A  185 (398)
T PRK06519        135 ERLMTELRPTLFLAQLSNLLAGNISIVHKVTGSSRTFMGEESAGVSAIEIA  185 (398)
T ss_pred             hcCCCccChhhhhhhhhhHHHHHHHHHhCCCCccccccCCccHHHHHHHHH
Confidence            445667899999999999999999999999999999999999999999884

>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=96.06  E-value=0.004  Score=60.97  Aligned_cols=73  Identities=40%  Similarity=0.663  Sum_probs=57.0

Q ss_pred             EEEeecccccchhhhhhhhh-hcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccC
Q psy5293         137 AEIIGYGMIDLSDVLSSNNA-LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSG  209 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~  209 (359)
                      +++.|.+........+.... .++.+..+.|++.+.++++..+.+++..+|++||.++++++|+|+..+|+...
T Consensus       102 Gv~vGt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~gl~Gp~~ti~~aCas~~~Al~~A~  175 (414)
T PRK08722        102 GVAIGSGIGGLGLIEAGHQALVEKGPRKVSPFFVPSTIVNMIAGNLSIMRGLRGPNIAISTACTTGLHNIGHAA  175 (414)
T ss_pred             EEEEeeCCCcchhHHHHHHHHHhcCcccCCchhcccccccHHHHHHHHHhCCCCCccccccccHHHHHHHHHHH
Confidence            77777765544443333322 24556678899999999999999999999999999999999999998887733

>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=96.01  E-value=0.0045  Score=60.46  Aligned_cols=73  Identities=21%  Similarity=0.333  Sum_probs=55.3

Q ss_pred             EEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccC
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSG  209 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~  209 (359)
                      +++.|.+........+..... ++.+..++|..+.+++++..+.++++.++++||+.+++++|+|+..++....
T Consensus       102 Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~Gp~~ti~~acas~~~Al~~A~  175 (405)
T PRK09116        102 GIAYGSSTGSTDPIGAFGTMLLEGSMSGITATTYVRMMPHTTAVNVGLFFGLKGRVIPTSSACTSGSQGIGYAY  175 (405)
T ss_pred             EEEEeecccchHHHHHHHHHHhhcCccccChhhhhhhcccHHHHHHHHHhCCCCCcccccchhhhHHHHHHHHH
Confidence            666776544443333322222 3445667888999999999999999999999999999999999998888743

>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=95.99  E-value=0.0044  Score=60.46  Aligned_cols=74  Identities=24%  Similarity=0.379  Sum_probs=55.1

Q ss_pred             EEEeecccccchhhhhhhh-hhc-ccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCC
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQ-GSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGD  210 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~-~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~  210 (359)
                      +++.|.+........+... +.+ +.+..+.|++.+++++++.+..++++++++||+++++++|++|..+|+...+
T Consensus        99 Gv~~gs~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~~~l~Gp~~tvs~aCas~~~Ai~~A~~  174 (406)
T PRK07967         99 GLIAGSGGGSTRNQVEAADAMRGPRGPKRVGPYAVTKAMASTVSACLATPFKIKGVNYSISSACATSAHCIGNAVE  174 (406)
T ss_pred             EEEEecCCccHHHHHHHHHHHHhccCcccCCchhhcccccchHHHHHHHHHCCCCCccccccHhHHHHHHHHHHHH
Confidence            6666665443322222111 222 4556788999999999999999999999999999999999999988887433

>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase

Probab=95.67  E-value=0.0063  Score=60.02  Aligned_cols=73  Identities=49%  Similarity=0.812  Sum_probs=57.0

Q ss_pred             EEEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccccccc
Q psy5293         136 YAEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS  208 (359)
Q Consensus       136 ~~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~  208 (359)
                      .+++.|.+......+.+... ..++....+.|++.++.+.++.+.+++..++++||+.++.++|+||..++...
T Consensus       121 ~Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~n~~a~~is~~~gl~Gp~~tv~~acaSg~~Al~~A  194 (437)
T PLN02836        121 TGVSIGGGIGSITDILEAAQLICEKRLRRLSPFFVPRILINMAAGHVSIRYGFQGPNHAAVTACATGAHSIGDA  194 (437)
T ss_pred             EEEEEeeccCcHHHHHHHHHHHHhcCCCCCChhhhhhhcccHHHHHHHHHhCCCCceeceeChhHHHHHHHHHH
Confidence            47778876554444433222 23455667889999999999999999999999999999999999998887763

>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species

Probab=95.64  E-value=0.024  Score=52.05  Aligned_cols=87  Identities=16%  Similarity=0.135  Sum_probs=62.1

Q ss_pred             CCChHHHHHHHHHcCCCc--cceec-cccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKV--QTLCV-YCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~g--p~~~v-~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      .|+.  +..|.+.+|++.  -++.+ ..+| +|+.+|..|.++++.-....+||+.+|.....+ +.+..+.-.+     
T Consensus       118 tPSL--samIvnr~~mr~di~~~nLsGMGCsAgliai~lA~~lL~~~p~~~ALVVstE~~s~~~-Y~G~~rsmlv-----  189 (290)
T PF08392_consen  118 TPSL--SAMIVNRYGMRSDIKSYNLSGMGCSAGLIAIDLAKDLLQAHPNSYALVVSTENISANW-YRGNDRSMLV-----  189 (290)
T ss_pred             CCcH--HHHHHHHhCCCcCeeeecccCCcchhhHHHHHHHHHHHHhCCCcEEEEEEEeeccccc-ccCCcHHHhh-----
Confidence            3554  888999999986  55554 4689 999999999999999998999999999844332 2211111111     


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecchHH
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEELDH  127 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~  127 (359)
                                    ...++..|++|++|.+...
T Consensus       190 --------------~NcLFr~GgAAvLLSn~~~  208 (290)
T PF08392_consen  190 --------------SNCLFRMGGAAVLLSNKPS  208 (290)
T ss_pred             --------------ccccccCCceeEEeecCcc
Confidence                          2345778889998876543

The region contains the active site residues, as well as motifs involved in substrate binding []. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006633 fatty acid biosynthetic process, 0016020 membrane

>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=95.51  E-value=0.0091  Score=58.55  Aligned_cols=76  Identities=21%  Similarity=0.319  Sum_probs=59.4

Q ss_pred             CcEEEEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccC
Q psy5293         133 ANIYAEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSG  209 (359)
Q Consensus       133 ~~i~~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~  209 (359)
                      .++ +++.|.+......+.+.+... ++.+..++|+..++++++..+..+++.++++||..+++++|+|+..+|++..
T Consensus       106 ~r~-Gv~~G~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~~~G~~~ti~taCaS~~~Al~~A~  182 (418)
T PRK07910        106 NRL-MVSIGTGLGSAEELVFAYDDMRARGLRAVSPLAVQMYMPNGPAAAVGLERHAKAGVITPVSACASGSEAIAQAW  182 (418)
T ss_pred             ccE-EEEEEEccCccHhHHHHHHHHHhcCcccCChhHHHHhccccHHHHHHHHhCCCCCcccccchhHHHHHHHHHHH
Confidence            344 777787765555544433333 4456678899999999999999999999999999999999999999988743

>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=95.30  E-value=0.0082  Score=58.10  Aligned_cols=72  Identities=26%  Similarity=0.232  Sum_probs=54.9

Q ss_pred             EEEeecccccchhhhhhhhhh-ccc---ccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL-QGS---YNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS  208 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~-~~~---~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~  208 (359)
                      +++.|++......+.+..... ++.   ...+.|.+++++++|+.+.++++.++++||+++++++|+||..+|+..
T Consensus        81 Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~ia~~~~~~Gp~~ti~~aCasg~~Ai~~A  156 (381)
T PRK05952         81 GVVIGSSRGCQGQWEKLARQMYQGDDSPDEELDLENWLDTLPHQAAIAAARQIGTQGPVLAPMAACATGLWAIAQG  156 (381)
T ss_pred             EEEEeeCcchHHHHHHHHHHHhhcCCccccccCHHHHHHhcccHHHHHHHHHhCCCCccccccchhHHHHHHHHHH
Confidence            777777655544444433322 222   135678888999999999999999999999999999999999888874

>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria

Probab=95.13  E-value=0.012  Score=57.42  Aligned_cols=71  Identities=21%  Similarity=0.229  Sum_probs=53.6

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|.+....+....... ..++.+..+.|+..+.++.+..+..+++.+|++||+++++++|+||..+|..
T Consensus        99 Gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~ti~~acaS~~~Al~~  170 (399)
T cd00832          99 GVVTASAAGGFEFGQRELQKLWSKGPRHVSAYQSFAWFYAVNTGQISIRHGMRGPSGVVVAEQAGGLDALAQ  170 (399)
T ss_pred             EEEEccCCccHHHHHHHHHHHHhcCccccChhhhhhhhhhHHHHHHHHHhCCCCCcccccchhHHHHHHHHH
Confidence            6777766544433332222 2234456678888888889999999999999999999999999999988876

CLFs have been shown to have decarboxylase activity towards malonyl-acyl carrier protein (ACP). CLFs are similar to other elongation ketosynthase domains, but their active site cysteine is replaced by a conserved glutamine.

>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase

Probab=95.10  E-value=0.099  Score=44.39  Aligned_cols=50  Identities=12%  Similarity=0.075  Sum_probs=43.1

Q ss_pred             HHHHHHHHcCCCc----cceeccccc-HHHHHHHHHHHHHHcCCCC--EEEEeeeCC
Q psy5293          24 PAGAISIDMDSKV----QTLCVYCLC-YGGHAIGDAFRLIQGGHAD--VMIAGAAES   73 (359)
Q Consensus        24 ~a~~ia~~~g~~g----p~~~v~~ac-sgl~Al~~A~~~I~~G~~d--~~lvgg~e~   73 (359)
                      ++.++...||+.+    -.+-+-.+| +|..||..|+++|+++..|  .+||+++|.
T Consensus        92 ~~t~v~~ll~~s~~~~~~~~e~k~ACygGTaAL~~a~~~v~s~~~~g~~aLVVasDi  148 (174)
T PF01154_consen   92 ISTYVHQLLGLSGNPDCRGVEMKQACYGGTAALQNAVNWVASSPWDGRKALVVASDI  148 (174)
T ss_dssp             HHHHHHHHTTTTT-SSSEEEEEESGGGHHHHHHHHHHHHHCSTTSTTEEEEEEEEEE
T ss_pred             HHHHHHHHhCcCCCCceeeeehhhhhHHHHHHHHHHHHHHhcCCCCCCeEEEEeccc
Confidence            5788999999955    245678999 9999999999999999765  999999995

Hydroxymethylglutaryl-CoA synthase (2.3.3.10 from EC) catalyses the condensation of acetyl-CoA with acetoacetyl-CoA to produce HMG-CoA and CoA, the second reaction in the mevalonate-dependent isoprenoid biosynthesis pathway. HMG-CoA synthase contains an important catalytic cysteine residue that acts as a nucleophile in the first step of the reaction: the acetylation of the enzyme by acetyl-CoA (its first substrate) to produce an acetyl-enzyme thioester, releasing the reduced coenzyme A. The subsequent nucleophilic attack on acetoacetyl-CoA (its second substrate) leads to the formation of HMG-CoA []. HMG-CoA synthase occurs in eukaryotes, archaea and certain bacteria []. In vertebrates, there are two isozymes located in different subcellular compartments: a cytosolic form that is the starting point of the mevalonate pathway (leads to cholesterol and other sterolic and isoprenoid compounds), and a mitochondrial form responsible for ketone body biosynthesis. HMG-CoA is also found in other eukaryotes such as insects, plants and fungi []. In bacteria, isoprenoid precursors are generally synthesised via an alternative, non-mevalonate pathway, however a number of Gram-positive pathogens utilise a mevalonate pathway involving HMG-CoA synthase that is parallel to that found in eukaryotes [, ]. This entry represents the N-terminal domain of HMG-CoA synthase enzymes from both eukaryotes and prokaryotes.; GO: 0004421 hydroxymethylglutaryl-CoA synthase activity, 0008299 isoprenoid biosynthetic process; PDB: 1X9E_B 2HDB_B 2WYA_C 2P8U_A 3V4X_A 3V4N_C 3LEH_A 1TXT_D 1TVZ_A 2FA0_A ....

>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional

Probab=94.83  E-value=0.015  Score=57.16  Aligned_cols=72  Identities=40%  Similarity=0.707  Sum_probs=53.9

Q ss_pred             EEEeecccccchhhhhhh-hhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSN-NALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS  208 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~  208 (359)
                      +.+.|.+........+.. ...++....++|+..+.++.+..+.++++.+|++||++++.++|+||..+|.+.
T Consensus       106 Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~a~~is~~~~l~Gp~~ti~~aCaSg~~Al~~A  178 (421)
T PTZ00050        106 GVNIGSGIGSLADLTDEMKTLYEKGHSRVSPYFIPKILGNMAAGLVAIKHKLKGPSGSAVTACATGAHCIGEA  178 (421)
T ss_pred             EEEEccCcccHHHHHHHHHHHHhcCcCcCCHHHHHhhhhhHHHHHHHHHhCCCCcccccccHhHHHHHHHHHH
Confidence            555655543333222222 222445667889999999999999999999999999999999999999888773

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=94.18  E-value=0.24  Score=45.59  Aligned_cols=52  Identities=12%  Similarity=0.086  Sum_probs=42.5

Q ss_pred             HHHHHHHHcCCCcc--cee-ccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCC
Q psy5293          24 PAGAISIDMDSKVQ--TLC-VYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCI   75 (359)
Q Consensus        24 ~a~~ia~~~g~~gp--~~~-v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~   75 (359)
                      +=.+|...||+.--  -+. -.-+| .|..++..|.+..|..--..+||+.+|.++
T Consensus       114 ~dari~~~Lgl~p~~~Rvpv~glGCaaga~glara~~y~ra~P~~~vlvV~vELCS  169 (356)
T COG3424         114 LDARIVGELGLSPDTRRVPVWGLGCAAGAAGLARARDYCRAAPDANVLVVCVELCS  169 (356)
T ss_pred             hhHHHHhhcCCCCccceeeeecchhhhhhhHHHHHHHHHhhCccceEEEEEeeeee
Confidence            36688999999642  222 35689 999999999999999999999999999743

>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated

Probab=94.13  E-value=0.03  Score=54.80  Aligned_cols=74  Identities=18%  Similarity=0.213  Sum_probs=53.4

Q ss_pred             CcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         133 ANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       133 ~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      .++ +++.|.+....+...............+.|++..+.+++..+..++..+|++||.++++++|+++..+|..
T Consensus       103 ~ri-GvivG~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~G~~~tv~~acas~~~Al~~  176 (410)
T PRK07103        103 DRI-GLVVGGSNLQQREQALVHETYRDRPAFLRPSYGLSFMDTDLVGLCSEQFGIRGEGFTVGGASASGQLAVIQ  176 (410)
T ss_pred             CCE-EEEEccCCcchHHHHHHHHHhccCccccChhhhhhhcchHHHHHHHHHhCCCCCcccccchhHHHHHHHHH
Confidence            344 66777654433333332222223445677888888999999999999999999999999999999877766

>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2

Probab=94.07  E-value=0.017  Score=52.37  Aligned_cols=70  Identities=36%  Similarity=0.577  Sum_probs=46.2

Q ss_pred             EEEEeecccccchhhhhhhhhhcc-cccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         136 YAEIIGYGMIDLSDVLSSNNALQG-SYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       136 ~~~i~g~~~~~~~~~~~~~~~~~~-~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      .+++.|.......++.....  ++ ......|.++..++++..+.++++.+|++||++++.++|+||..+|..
T Consensus       115 ~gv~~G~~~~~~~~~~~l~~--~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~G~~~tv~~acaSgl~Al~~  185 (254)
T PF00109_consen  115 VGVFVGSSSGDYEFYRALDE--DGETPRDVSPWFVPNTLPNSAAGRIAILFGLRGPSYTVSTACASGLAALEA  185 (254)
T ss_dssp             EEEEEEESSSHHHHHHHHHH--HTTCGGGSHTTHHHHHSTTHHHHHHHHHHTB-SSEEEEE-GGGHHHHHHHH
T ss_pred             eeeccccccccccccccccc--cccccccccccccCcccccccccchhhhcCCCCccccccccccccccccch
Confidence            47888877552211111111  11 134556666777899999999999999999999999999999544443

3.1.41 from EC (KAS) [] is the enzyme that catalyzes the condensation of malonyl-ACP with the growing fatty acid chain. It is found as a component of a number of enzymatic systems, including fatty acid synthetase (FAS), which catalyzes the formation of long-chain fatty acids from acetyl-CoA, malonyl-CoA and NADPH; the multi-functional 6-methysalicylic acid synthase (MSAS) from Penicillium patulum [], which is involved in the biosynthesis of a polyketide antibiotic; polyketide antibiotic synthase enzyme systems; Emericella nidulans multifunctional protein Wa, which is involved in the biosynthesis of conidial green pigment; Rhizobium nodulation protein nodE, which probably acts as a beta-ketoacyl synthase in the synthesis of the nodulation Nod factor fatty acyl chain; and yeast mitochondrial protein CEM1. The condensation reaction is a two step process, first the acyl component of an activated acyl primer is transferred to a cysteine residue of the enzyme and is then condensed with an activated malonyl donor with the concomitant release of carbon dioxide. This entry represents the N-terminal domain of beta-ketoacyl-ACP synthases. ; PDB: 1J3N_B 3KZU_C 1W0I_A 2IX4_A 1F91_B 2BYZ_D 2AQB_C 2BZ3_C 1H4F_C 2VB9_B ....

>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=94.04  E-value=0.026  Score=55.47  Aligned_cols=71  Identities=39%  Similarity=0.648  Sum_probs=54.7

Q ss_pred             EEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|.+........+..... ++....+.|++.+.++.+..+.+++..+|++||+.++.++|+||..++..
T Consensus       111 Gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~~v~~aCaSg~~Al~~  182 (424)
T PRK06333        111 ATIIGSGVGGFPAIAEAVRTLDSRGPRRLSPFTIPSFLTNMAAGHVSIRYGFKGPLGAPVTACAAGVQAIGD  182 (424)
T ss_pred             EEEEecCcccHHHHHHHHHHHHhcCCcccChhHHhhhhhhHHHHHHHHHhCCCCCCccccchhHHHHHHHHH
Confidence            667776544443333322222 44566788999999999999999999999999999999999999888776

>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=93.86  E-value=0.039  Score=53.88  Aligned_cols=72  Identities=38%  Similarity=0.564  Sum_probs=53.9

Q ss_pred             EEEeecccccchhhhhh-hhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccccccc
Q psy5293         137 AEIIGYGMIDLSDVLSS-NNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS  208 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~-~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~  208 (359)
                      +.+.|.+........+. ....++.+..+.|++.+.+++++.+..++..+|++||..++.++|+++..++...
T Consensus       100 Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~~~~~acas~~~Al~~A  172 (406)
T PRK08439        100 GVSSASGIGGLPNIEKNSIICFEKGPRKISPFFIPSALVNMLGGFISIEHGLKGPNLSSVTACAAGTHAIIEA  172 (406)
T ss_pred             EEEEecCCccHHHHHHHHHHHHhcCccccCchhcccccccHHHHHHHHHhCCCCCccccccHhHHHHHHHHHH
Confidence            55555543333222221 1122455677889999999999999999999999999999999999999888774

>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed

Probab=92.58  E-value=0.075  Score=51.90  Aligned_cols=71  Identities=45%  Similarity=0.727  Sum_probs=54.3

Q ss_pred             EEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.+.+......+.+..... +..+..+.|+..+..+.+..+..++..+|++||.+++.++|+|+..++..
T Consensus       100 gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~tv~~acaSgl~Al~~  171 (411)
T PRK07314        100 GVIIGSGIGGLETIEEQHITLLEKGPRRVSPFFVPMAIINMAAGHVSIRYGAKGPNHSIVTACATGAHAIGD  171 (411)
T ss_pred             EEEEecCcCChHHHHHHHHHHHhcCccccChhhhhhhcchHHHHHHHHHhCCCCccccchhhhHHHHHHHHH
Confidence            677776654444444433333 44566778888888899999999999999999999999999999777665

>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2

Probab=91.78  E-value=0.24  Score=44.14  Aligned_cols=52  Identities=12%  Similarity=0.114  Sum_probs=40.5

Q ss_pred             HHHHHHHHcCCCc---cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCC
Q psy5293          24 PAGAISIDMDSKV---QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCI   75 (359)
Q Consensus        24 ~a~~ia~~~g~~g---p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~   75 (359)
                      +-.++...|||+.   .......+| .|..+|..|.+..++..-..|||+.+|.++
T Consensus       138 lD~~l~~~LgL~~~v~R~~i~~~GC~gg~~~L~~A~~~~~~~p~a~VLvv~vElcs  193 (226)
T PF00195_consen  138 LDARLINRLGLRPDVQRTPIFGMGCAGGAAGLRRAKDIARANPGARVLVVCVELCS  193 (226)
T ss_dssp             HHHHHHHHHT--TTSEEEEEES-GGGHHHHHHHHHHHHHHHSTT-EEEEEEEEEGG
T ss_pred             hhHHHHhcCCCCCCcEEEEEeccchhhHHHHHHHHHHHHhCCccceEEEEEEEeeE
Confidence            3678999999976   333457899 999999999999999999999999999743

3.1.74 from EC) and stilbene synthases (STS) (formerly known as resveratrol synthases) are related plant enzymes. CHS is an important enzyme in flavanoid biosynthesis and STS is a key enzyme in stilbene-type phyloalexin biosynthesis. Both enzymes catalyse the addition of three molecules of malonyl-CoA to a starter CoA ester (a typical example is 4-coumaroyl-CoA), producing either a chalcone (with CHS) or stilbene (with STS) []. These enzymes have a conserved cysteine residue, located in the central section of the protein sequence, which is essential for the catalytic activity of both enzymes and probably represents the binding site for the 4-coumaryl-CoA group [].; GO: 0016746 transferase activity, transferring acyl groups, 0009058 biosynthetic process; PDB: 3EUO_B 3EUT_C 3EUQ_D 3E1H_A 3AWK_A 3AWJ_A 2H84_A 3A5S_A 3A5Q_B 3A5R_A ....

>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed

Probab=90.65  E-value=0.18  Score=49.05  Aligned_cols=72  Identities=15%  Similarity=0.161  Sum_probs=51.9

Q ss_pred             EEEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         136 YAEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       136 ~~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      .+++.|.+....++..+.+... ++......++.++++++++.+..++.++|++||.+++.++|+++..+|..
T Consensus        97 ~gv~~Gt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~i~~acas~~~Al~~  169 (392)
T PRK09185         97 IGVVLGTSTSGILEGELAYRRRDPAHGALPADYHYAQQELGSLADFLRAYLGLSGPAYTISTACSSSAKVFAS  169 (392)
T ss_pred             EEEEEeeCCccHHHHHHHHHHHhhccCCCCCchhhhhhcccHHHHHHHHHhCCCCCcccccChhHHHHHHHHH
Confidence            3777887765555544332221 11112234677788889999999999999999999999999999877776

>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II

Probab=89.49  E-value=0.27  Score=47.84  Aligned_cols=71  Identities=46%  Similarity=0.719  Sum_probs=52.3

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.+.+........+... ..++.+..+.|++.+..+.+..+..++..+|++||..++.++|+||..++..
T Consensus        99 gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~g~~~~v~~acaSg~~Al~~  170 (407)
T TIGR03150        99 GVIIGSGIGGLETIEEQHIVLLEKGPRRVSPFFIPMSIINMAAGQISIRYGAKGPNHAVVTACATGTHAIGD  170 (407)
T ss_pred             EEEEecCCCchHHHHHHHHHHHhcCccccChhhhhcccccHHHHHHHHHhCCCCcccccccHHHHHHHHHHH
Confidence            5666655433333332222 2244556688888888999999999999999999999999999999877665

FabB sequences should fall well below the noise cutoff of this model.

>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases

Probab=88.90  E-value=0.25  Score=48.07  Aligned_cols=46  Identities=28%  Similarity=0.432  Sum_probs=40.3

Q ss_pred             ccCcchhhcccC--CcchhhhHHHhcc-CCCCcccccccccCccccccc
Q psy5293         163 KLSPYFVTRILP--NMSAGQISIEHGF-QGPNHCVSTACATGAHAIGMS  208 (359)
Q Consensus       163 ~~~p~~~~~~~~--~~~a~~ia~~~g~-~gp~~~~~~acAsg~~aig~~  208 (359)
                      ...|+..+.++.  +..+.+++..+++ +||..++.++|+|+..+|...
T Consensus       124 ~~~~~~~~~~~~~~~~~a~~is~~~gl~~Gp~~tv~~aCaS~~~Al~~A  172 (407)
T cd00828         124 AVNPYVSPKWMLSPNTVAGWVNILLLSSHGPIKTPVGACATALEALDLA  172 (407)
T ss_pred             ccCCcccchhccccchHHHHHHHHhCcCCCCCcCcccHHHHHHHHHHHH
Confidence            355777777887  9999999999999 999999999999999888763

They are characterized by the utlization of acyl carrier protein (ACP) thioesters as primer substrates, as well as the nature of their active site residues.

>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II

Probab=88.46  E-value=0.33  Score=47.11  Aligned_cols=71  Identities=48%  Similarity=0.789  Sum_probs=53.5

Q ss_pred             EEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.+.+........+.+... ++....++|+..+..+.+..+..++.++|++||.+++.++|+++..++..
T Consensus        99 gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~g~~~~v~~acas~~~Al~~  170 (406)
T cd00834          99 GVVIGSGIGGLATIEEAYRALLEKGPRRVSPFFVPMALPNMAAGQVAIRLGLRGPNYTVSTACASGAHAIGD  170 (406)
T ss_pred             EEEEccCCcchHHHHHHHHHHHhcCCcccChhHHhhhcccHHHHHHHHHhCCCCcccccchHHHHHHHHHHH
Confidence            666776655444444333322 45556788888888888999999999999999999999999998766554

KASs are responsible for the elongation steps in fatty acid biosynthesis. KASIII catalyses the initial condensation and KAS I and II catalyze further elongation steps by Claisen condensation of malonyl-acyl carrier protein (ACP) with acyl-ACP.

>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=86.35  E-value=1.1  Score=41.40  Aligned_cols=73  Identities=27%  Similarity=0.248  Sum_probs=53.2

Q ss_pred             HHHHHHHHHHHcCCCCCCcc---EEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHH
Q psy5293         224 ALLAMTRALIDANLSPGDIS---YINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAV  300 (359)
Q Consensus       224 ~~~a~~~al~~agl~~~dI~---~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l  300 (359)
                      .+++.+++|...++.|+|||   ++..-|..|+.-|..-+.+|..-...+++||.+.    |=..||+|+.....-+.+-
T Consensus        80 ~v~a~r~aL~~~~l~pedId~vv~vtsTG~~~Ps~dari~~~Lgl~p~~~Rvpv~gl----GCaaga~glara~~y~ra~  155 (356)
T COG3424          80 GVDALRRALDGSPLRPEDIDAVVTVTSTGLATPSLDARIVGELGLSPDTRRVPVWGL----GCAAGAAGLARARDYCRAA  155 (356)
T ss_pred             HHHHHHHHhccCCCCHHHCcEEEEEeeccccCCChhHHHHhhcCCCCccceeeeecc----hhhhhhhHHHHHHHHHhhC
Confidence            36889999999999999999   4556777888777766666655444667888775    5556777777666665543

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	359
2iwy_A	438	Human Mitochondrial Beta-ketoacyl Acp Synthase Leng		1e-33
2iwy_A	438	Human Mitochondrial Beta-ketoacyl Acp Synthase Leng		7e-32
3kzu_A	428	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		2e-33
3kzu_A	428	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		7e-22
1w0i_A	431	Arabidopsis Thaliana Mitochondrial Kas Length = 431		6e-33
1w0i_A	431	Arabidopsis Thaliana Mitochondrial Kas Length = 431		1e-29
2c9h_A	444	Structure Of Mitochondrial Beta-Ketoacyl Synthase L		1e-32
2c9h_A	444	Structure Of Mitochondrial Beta-Ketoacyl Synthase L		6e-32
4ddo_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		1e-31
4ddo_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		1e-21
3e60_A	424	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		2e-31
3e60_A	424	Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei		1e-20
4f32_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		4e-31
4f32_A	451	Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei		9e-22
1e5m_A	416	Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas		9e-31
1e5m_A	416	Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas		2e-23
2gqd_A	437	The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii		2e-28
2gqd_A	437	The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii		1e-20
1j3n_A	408	Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei		4e-28
1b3n_A	412	Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta		4e-28
1b3n_A	412	Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta		5e-20
2gfy_A	427	Structure Of E. Coli Fabf(K335a) Mutant With Covale		5e-28
2gfy_A	427	Structure Of E. Coli Fabf(K335a) Mutant With Covale		3e-19
2gfw_A	427	Structure Of Wild Type E. Coli Fabf (Kasii) Length		5e-28
2gfw_A	427	Structure Of Wild Type E. Coli Fabf (Kasii) Length		5e-20
1tqy_A	424	The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le		5e-28
3hnz_A	427	Structure Of E. Coli Fabf(C163a) In Complex With Pl		5e-27
3hnz_A	427	Structure Of E. Coli Fabf(C163a) In Complex With Pl		5e-20
2gfv_A	427	Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng		8e-27
2gfv_A	427	Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng		5e-20
3o04_A	413	Crystal Structure Of The Beta-Keto-Acyl Carrier Pro		1e-25
3o04_A	413	Crystal Structure Of The Beta-Keto-Acyl Carrier Pro		1e-20
1ox0_A	430	The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie		2e-22
1ox0_A	430	The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie		3e-13
2alm_A	431	Crystal Structure Analysis Of A Mutant Beta-Ketoacy		2e-22
2alm_A	431	Crystal Structure Analysis Of A Mutant Beta-Ketoacy		2e-12
2rjt_A	428	Crystal Structure Analysis Of A Surface Entropy Red		2e-22
2rjt_A	428	Crystal Structure Analysis Of A Surface Entropy Red		5e-13
2wgd_A	416	Crystal Structure Of Kasa Of Mycobacterium Tubercul		5e-21
2wgd_A	416	Crystal Structure Of Kasa Of Mycobacterium Tubercul		9e-20
2gp6_A	434	X-Ray Crystal Structure Of Mycobacterium Tuberculos		9e-21
2gp6_A	434	X-Ray Crystal Structure Of Mycobacterium Tuberculos		1e-18
2wgf_A	416	Crystal Structure Of Mycobacterium Tuberculosis C17		1e-20
2wgf_A	416	Crystal Structure Of Mycobacterium Tuberculosis C17		7e-20
3lrf_A	428	Crystal Structure Of Beta-Ketoacyl Synthase From Br		1e-19
3lrf_A	428	Crystal Structure Of Beta-Ketoacyl Synthase From Br		1e-10
3u0f_A	411	The Structure Of Beta-Ketoacyl Synthase From Brucel		1e-19
3u0f_A	411	The Structure Of Beta-Ketoacyl Synthase From Brucel		1e-10
1f91_A	406	Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In		3e-19
1f91_A	406	Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In		2e-17
2byw_A	418	Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C		3e-19
2byw_A	418	Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C		1e-16
1dd8_A	406	Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr		3e-19
1dd8_A	406	Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr		2e-17
1fj4_A	406	The Structure Of Beta-Ketoacyl-[acyl Carrier Protei		3e-19
1fj4_A	406	The Structure Of Beta-Ketoacyl-[acyl Carrier Protei		2e-17
2byy_A	418	E. Coli Kas I H298e Mutation Length = 418		3e-19
2byy_A	418	E. Coli Kas I H298e Mutation Length = 418		2e-16
2byz_A	418	Structure Of E. Coli Kas I H298q Mutant In Complex		3e-19
2byz_A	418	Structure Of E. Coli Kas I H298q Mutant In Complex		2e-16
1ek4_A	418	Beta-Ketoacyl [acyl Carrier Protein] Synthase I In		3e-19
1ek4_A	418	Beta-Ketoacyl [acyl Carrier Protein] Synthase I In		2e-17
1h4f_A	406	E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha		3e-19
1h4f_A	406	E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha		5e-17
2vb7_C	406	Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap		3e-19
2vb7_C	406	Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap		2e-17
4ewg_A	412	Crystal Structure Of A Beta-Ketoacyl Synthase From		3e-18
4ewg_A	412	Crystal Structure Of A Beta-Ketoacyl Synthase From		2e-09
3oyt_A	410	1.84 Angstrom Resolution Crystal Structure Of 3-Oxo		1e-17
3oyt_A	410	1.84 Angstrom Resolution Crystal Structure Of 3-Oxo		2e-15
2hg4_A	917	Structure Of The Ketosynthase-acyltransferase Didom		1e-08
2qo3_A	915	Crystal Structure Of [ks3][at3] Didomain From Modul		1e-06
1tqy_B	415	The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le		7e-05
3hhd_A	965	Structure Of The Human Fatty Acid Synthase Ks-Mat D		1e-04

>pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438

Iteration: 1
 Score =  140 bits (352), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 73/136 (53%), Positives = 92/136 (67%), Gaps = 4/136 (2%)
Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIA 68
           +SP+FV     NM  AG +SI    K     V   C  G HA+GD+FR I  G ADVM+A
Sbjct: 154 VSPFFVPKILVNMA-AGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVA 212
Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  +SCIS LS+A F R RAL+T  N++P  A RPF  +RDGFVMGEG+A+LVLEE +HA
Sbjct: 213 GGTDSCISPLSLAGFSRARALST--NSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHA 270
Query: 129 LARSANIYAEIIGYGM 144
           + R A IYAE++GYG+
Sbjct: 271 VQRRARIYAEVLGYGL 286

>pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438

Iteration: 1
 Score =  134 bits (337), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 77/152 (50%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G+SGD  H+T+P  +G GAL  M  AL DA + P +ISYINAHATSTPLGD  E KAI  
Sbjct: 285 GLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKH 344
Query: 266 LFP--AQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           LF   A  L VSSTK            +E+AFT LA +   +PP +NL+    E      
Sbjct: 345 LFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYV 404
Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
           P    EWKT+ R + L NSFGFGGTNA LCIA
Sbjct: 405 PLKAQEWKTEKRFIGLTNSFGFGGTNATLCIA 436

>pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428

Iteration: 1
 Score =  139 bits (350), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 95/136 (69%), Gaps = 2/136 (1%)
Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           +SP+F+     N+  +G +SI    +     V   C  G HAIGDA RLI  G ADVM+A
Sbjct: 144 ISPFFIPGRLINLA-SGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVA 202
Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  ES +S++S+A F   +AL+T+ N++P  ASRP+D+ RDGFVMGEG+ I+VLEEL+HA
Sbjct: 203 GGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDGFVMGEGAGIVVLEELEHA 262
Query: 129 LARSANIYAEIIGYGM 144
           LAR A IYAE+IGYGM
Sbjct: 263 LARGAKIYAEVIGYGM 278

>pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 63/156 (40%), Positives = 84/156 (53%), Gaps = 6/156 (3%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GMSGD  H+T+P E G GA   M  AL  A + P +I YINAH TST + D IEL A+  
Sbjct: 277 GMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTST-MADTIELGAVER 335
Query: 266 LF--PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +    A ++ +SSTK             E+ F+ LA+ + + P  +NL++P  +      
Sbjct: 336 VVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLV 395
Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS 359
           P    E K D   VAL NSFGFGGTNA L +  Y +
Sbjct: 396 PHKPRERKID---VALSNSFGFGGTNASLVLRRYTA 428

>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431

Iteration: 1
 Score =  138 bits (347), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 71/136 (52%), Positives = 90/136 (66%), Gaps = 2/136 (1%)
Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           LSP+F+     NM  +G +S+    +         C  G H+IGDA R+IQ G ADVM+A
Sbjct: 145 LSPFFIPKILVNMA-SGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVA 203
Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  ES I  LS+A F R RAL+T+FN+ P +ASRPFD  RDGFV+GEGS ++VLEE +HA
Sbjct: 204 GGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHA 263
Query: 129 LARSANIYAEIIGYGM 144
             R A IYAE+ GYGM
Sbjct: 264 KRRGAKIYAELCGYGM 279

>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431

Iteration: 1
 Score =  127 bits (318), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 71/154 (46%), Positives = 92/154 (59%), Gaps = 6/154 (3%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GMSGD HH+T P EDG+GA+LAMTRAL  + L P  I Y+NAHATSTP+GD +E +AI +
Sbjct: 278 GMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKT 337
Query: 266 LFPAQ----RLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY 321
           +F        L  SSTK            +E+ F+ILA+H G+ P  +N+++P       
Sbjct: 338 VFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKR 397
Query: 322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
             P  +T  K    R A+ NSFGFGGTNA L  A
Sbjct: 398 FMP--LTTSKKMLVRTAMSNSFGFGGTNASLLFA 429

>pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444

Iteration: 1
 Score =  137 bits (344), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 91/136 (66%), Gaps = 4/136 (2%)
Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCV-YCLCYGGHAIGDAFRLIQGGHADVMIA 68
           +SP+FV     NM  AG +SI    K     V      G HA+GD+FR I  G ADVM+A
Sbjct: 160 VSPFFVPKILVNMA-AGQVSIRYKLKGPNHAVSTAXTTGAHAVGDSFRFIAHGDADVMVA 218
Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  +SCIS LS+A F R RAL+T  N++P  A RPF  +RDGFVMGEG+A+LVLEE +HA
Sbjct: 219 GGTDSCISPLSLAGFSRARALST--NSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHA 276
Query: 129 LARSANIYAEIIGYGM 144
           + R A IYAE++GYG+
Sbjct: 277 VQRRARIYAEVLGYGL 292

>pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444

Iteration: 1
 Score =  134 bits (338), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 77/152 (50%), Positives = 91/152 (59%), Gaps = 2/152 (1%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G+SGD  H+T+P  +G GAL  M  AL DA + P +ISYINAHATSTPLGD  E KAI  
Sbjct: 291 GLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKH 350
Query: 266 LFP--AQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           LF   A  L VSSTK            +E+AFT LA +   +PP +NL+    E      
Sbjct: 351 LFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYV 410
Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
           P    EWKT+ R + L NSFGFGGTNA LCIA
Sbjct: 411 PLKAQEWKTEKRFIGLTNSFGFGGTNATLCIA 442

>pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451

Iteration: 1
 Score =  134 bits (336), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 91/135 (67%), Gaps = 2/135 (1%)
Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIA 68
           LSP+ + PFF + + AG ISI    +    C    C     AIGDA R+I+ G ADV++A
Sbjct: 159 LSPFTI-PFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLA 217
Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G AE+   ++S+  F   RAL+T F+ EP +ASRPFD+ RDGFVMGEG+A++V+E LDHA
Sbjct: 218 GGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDGFVMGEGAAMVVVESLDHA 277
Query: 129 LARSANIYAEIIGYG 143
           LAR A   AEIIGYG
Sbjct: 278 LARGARPIAEIIGYG 292

>pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451

Iteration: 1
 Score =  100 bits (250), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 96/176 (54%), Gaps = 21/176 (11%)
Query: 197 ACATGAHAI------GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GA  I      G + D +H+T+  +DG GA+ AM  AL   +++P  + Y+NAHAT
Sbjct: 277 ALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHAT 336
Query: 251 STPLGDVIELKAIGSLF-----PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLV 305
           STP+GD  E++A+ ++F     PA    +SSTK            +E+AF+ILA+ +G++
Sbjct: 337 STPVGDAGEIEALKTVFGVGAGPA----ISSTKSATGHLLGAAGAIEAAFSILALRDGVL 392
Query: 306 PPNVNLEDPCEEAGGYEC--PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS 359
           P  +NLE P   A G +   P A    +     +AL N FGFGG NA +    Y S
Sbjct: 393 PGTLNLEHPDPAADGLDLIGPAA----RHVPVEIALSNGFGFGGVNASVLFRRYPS 444

>pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424

Iteration: 1
 Score =  132 bits (333), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 72/136 (52%), Positives = 93/136 (68%), Gaps = 2/136 (1%)
Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           +SP+F+     N+  +G +SI    +     V   C  G HAIGDA RLI  G ADVM+A
Sbjct: 140 ISPFFIPGRLINLA-SGYVSIKYGLRGPNHSVVTACSTGAHAIGDAARLIALGDADVMLA 198
Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  ES I+++S+A F   RAL+T  N++P +ASRP+D  RDGFVMGEG+AI+VLEEL+HA
Sbjct: 199 GGTESPINRISLAGFSACRALSTCRNDDPERASRPYDVDRDGFVMGEGAAIVVLEELEHA 258
Query: 129 LARSANIYAEIIGYGM 144
             R A IYAEIIGYG+
Sbjct: 259 KKRGARIYAEIIGYGL 274

>pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 60/154 (38%), Positives = 85/154 (55%), Gaps = 6/154 (3%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G+SGD +H+T+P E G GA  +M  AL  A ++  ++ YINAH TST + DVIEL A+  
Sbjct: 273 GLSGDAYHITAPSESGEGAQRSMMAALKRAQVNVSELDYINAHGTST-MADVIELAAVER 331
Query: 266 L--FPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +  + A ++ +SSTK             E+ F +LA+ + + P  +NLE+P  E      
Sbjct: 332 VLGYYAPQVSMSSTKSSIGHLLGAAGAAEAIFCVLAIRDNIAPATLNLENPSIETKIDLV 391
Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
           P    E K D     L NSFGFGGTNA L +  +
Sbjct: 392 PHKPRERKID---TVLSNSFGFGGTNASLVMRRF 422

>pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451

Iteration: 1
 Score =  132 bits (331), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 70/135 (51%), Positives = 91/135 (67%), Gaps = 2/135 (1%)
Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLC-VYCLCYGGHAIGDAFRLIQGGHADVMIA 68
           LSP+ + PFF + + AG ISI    +    C V        AIGDA R+I+ G ADV++A
Sbjct: 159 LSPFTI-PFFLSNLAAGQISIKHRFRGPLGCPVTAXAASVQAIGDAMRMIRTGEADVVLA 217
Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G AE+   ++S+  F   RAL+T F+ EP +ASRPFD+ RDGFVMGEG+A++V+E LDHA
Sbjct: 218 GGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDGFVMGEGAAMVVVESLDHA 277
Query: 129 LARSANIYAEIIGYG 143
           LAR A   AEIIGYG
Sbjct: 278 LARGARPIAEIIGYG 292

>pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451

Iteration: 1
 Score =  100 bits (250), Expect = 9e-22,   Method: Compositional matrix adjust.
 Identities = 66/176 (37%), Positives = 96/176 (54%), Gaps = 21/176 (11%)
Query: 197 ACATGAHAI------GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GA  I      G + D +H+T+  +DG GA+ AM  AL   +++P  + Y+NAHAT
Sbjct: 277 ALARGARPIAEIIGYGTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHAT 336
Query: 251 STPLGDVIELKAIGSLF-----PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLV 305
           STP+GD  E++A+ ++F     PA    +SSTK            +E+AF+ILA+ +G++
Sbjct: 337 STPVGDAGEIEALKTVFGVGAGPA----ISSTKSATGHLLGAAGAIEAAFSILALRDGVL 392
Query: 306 PPNVNLEDPCEEAGGYEC--PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS 359
           P  +NLE P   A G +   P A    +     +AL N FGFGG NA +    Y S
Sbjct: 393 PGTLNLEHPDPAADGLDLIGPAA----RHVPVEIALSNGFGFGGVNASVLFRRYPS 444

>pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416

Iteration: 1
 Score =  130 bits (328), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 69/135 (51%), Positives = 89/135 (65%), Gaps = 3/135 (2%)
Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIAG 69
           SP+ +     NM  +G  +I++ +K    C    C  G +AIGDAFRL+Q G+A  MI G
Sbjct: 134 SPFMIPMMIANMA-SGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICG 192
Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
             E+ I+ LS A F   RAL+ + N++P  ASRPFDK RDGFVMGEGS IL+LEEL+ AL
Sbjct: 193 GTEAAITPLSYAGFASARALSFR-NDDPLHASRPFDKDRDGFVMGEGSGILILEELESAL 251
Query: 130 ARSANIYAEIIGYGM 144
           AR A IY E++GY M
Sbjct: 252 ARGAKIYGEMVGYAM 266

>pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416

Iteration: 1
 Score =  106 bits (265), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 69/173 (39%), Positives = 89/173 (51%), Gaps = 11/173 (6%)
Query: 194 VSTACATGAHAIG------MSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA 247
           + +A A GA   G      M+ D +H+T+P  DGRGA  A+  AL D+ L P  +SYINA
Sbjct: 247 LESALARGAKIYGEMVGYAMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINA 306
Query: 248 HATSTPLGDVIELKAIGSLFP--AQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLV 305
           H TSTP  DV E +AI       A  + VSSTK            +E+  T++A+ E  V
Sbjct: 307 HGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKV 366
Query: 306 PPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           PP +NLE+P  E      P        D   VAL NSFGFGG N  L   +Y+
Sbjct: 367 PPTINLENPDPECDLDYVPGQSRALIVD---VALSNSFGFGGHNVTLAFKKYQ 416

>pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437

Iteration: 1
 Score =  123 bits (308), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 65/135 (48%), Positives = 89/135 (65%), Gaps = 4/135 (2%)
Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           +SP+FV    P+M   G +SID+ +K         C  G ++IG+AF+++Q G AD MI 
Sbjct: 154 VSPFFVPMLIPDMA-TGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMIT 212
Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  E+ I+ ++IA F   RAL+T  N++   A RPF + RDGFVMGEG+ ILV+E L+ A
Sbjct: 213 GGTEAPITHMAIAGFSASRALST--NDDIETACRPFQEGRDGFVMGEGAGILVIESLESA 270
Query: 129 LARSANIYAEIIGYG 143
            AR ANIYAEI+GYG
Sbjct: 271 QARGANIYAEIVGYG 285

>pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/156 (35%), Positives = 83/156 (53%), Gaps = 5/156 (3%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G +GD +H+T+P  +G G   AM  A+ DA + P D+ Y+NAH TSTP+GD+ E+KAI +
Sbjct: 285 GTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKN 344
Query: 266 LF--PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
            F   A+ L VSSTK            +E+ F+ L++ +  V P ++   P  E      
Sbjct: 345 TFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIV 404
Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS 359
           P    +        A+ NS GFGG NA L   ++++
Sbjct: 405 PNEAQDLDI---TYAMSNSLGFGGHNAVLVFKKFEA 437

>pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 70/150 (46%), Positives = 88/150 (58%), Gaps = 6/150 (4%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G S D HH+T P  +G+GA LAM RAL DA ++P  + YINAH TSTP+GD  E+ AI  
Sbjct: 259 GRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKR 318
Query: 266 LF--PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +F   A+RLMVSSTK            +E+  T+ A++ G++PP +NLEDP  E      
Sbjct: 319 VFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFV 378
Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLC 353
           P    E K D    AL NSF FGG NA L 
Sbjct: 379 PEP-REAKVD---YALSNSFAFGGHNAVLA 404

>pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412

Iteration: 1
 Score =  122 bits (305), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 90/144 (62%), Gaps = 3/144 (2%)
Query: 2   LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQG 60
           L  G    +SP+FV     NMV AG ++I    +  ++ +   C  G H IG A R+I  
Sbjct: 121 LMNGGPRKISPFFVPSTIVNMV-AGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAY 179
Query: 61  GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
           G ADVM+AG AE   + L +  F   RAL+T+ N+ P  ASRP+DK RDGFV+G+G+ +L
Sbjct: 180 GDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGML 238
Query: 121 VLEELDHALARSANIYAEIIGYGM 144
           VLEE +HA  R A IYAE++G+GM
Sbjct: 239 VLEEYEHAKKRGAKIYAELVGFGM 262

>pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Query: 205 IGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG 264
            GMS D +H+TSP E+G GA LAM  AL DA +    I Y+NAH TSTP GD  E +A+ 
Sbjct: 260 FGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVK 319
Query: 265 SLF--PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE 322
           ++F   A R++VSSTK            +ES ++ILA+ +  VPP +NL++P E      
Sbjct: 320 TIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDF 379
Query: 323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE 356
            P    +    G    L NSFGFGGTN  L   +
Sbjct: 380 VPHEARQ--VSGMEYTLCNSFGFGGTNGSLIFKK 411

>pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 90/144 (62%), Gaps = 3/144 (2%)
Query: 2   LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQG 60
           L  G    +SP+FV     NMV AG ++I    +  ++ +   C  G H IG A R+I  
Sbjct: 136 LMNGGPRKISPFFVPSTIVNMV-AGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAY 194
Query: 61  GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
           G ADVM+AG AE   + L +  F   RAL+T+ N+ P  ASRP+DK RDGFV+G+G+ +L
Sbjct: 195 GDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGML 253
Query: 121 VLEELDHALARSANIYAEIIGYGM 144
           VLEE +HA  R A IYAE++G+GM
Sbjct: 254 VLEEYEHAKKRGAKIYAELVGFGM 277

>pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 64/154 (41%), Positives = 85/154 (55%), Gaps = 4/154 (2%)
Query: 205 IGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG 264
            GMS D +H+TSP E+G GA LAM  AL DA +    I Y+NAH TSTP GD  E +A+ 
Sbjct: 275 FGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVK 334
Query: 265 SLF--PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE 322
           ++F   A R++VSST             +ES ++ILA+ +  VPP +NL++P E      
Sbjct: 335 TIFGEAASRVLVSSTASMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDF 394
Query: 323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE 356
            P    +    G    L NSFGFGGTN  L   +
Sbjct: 395 VPHEARQ--VSGMEYTLCNSFGFGGTNGSLIFKK 426

>pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 66/144 (45%), Positives = 90/144 (62%), Gaps = 3/144 (2%)
Query: 2   LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQG 60
           L  G    +SP+FV     NMV AG ++I    +  ++ +   C  G H IG A R+I  
Sbjct: 136 LMNGGPRKISPFFVPSTIVNMV-AGHLTIMYGLRGPSISIATACTSGVHNIGHAARIIAY 194
Query: 61  GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
           G ADVM+AG AE   + L +  F   RAL+T+ N+ P  ASRP+DK RDGFV+G+G+ +L
Sbjct: 195 GDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGML 253
Query: 121 VLEELDHALARSANIYAEIIGYGM 144
           VLEE +HA  R A IYAE++G+GM
Sbjct: 254 VLEEYEHAKKRGAKIYAELVGFGM 277

>pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Query: 205 IGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG 264
            GMS D +H+TSP E+G GA LAM  AL DA +    I Y+NAH TSTP GD  E +A+ 
Sbjct: 275 FGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVK 334
Query: 265 SLF--PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE 322
           ++F   A R++VSSTK            +ES ++ILA+ +  VPP +NL++P E      
Sbjct: 335 TIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDF 394
Query: 323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE 356
            P    +    G    L NSFGFGGTN  L   +
Sbjct: 395 VPHEARQ--VSGMEYTLCNSFGFGGTNGSLIFKK 426

>pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424

Iteration: 1
 Score =  121 bits (304), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 107/353 (30%), Positives = 152/353 (43%), Gaps = 71/353 (20%)
Query: 10  LSPYFVNPFFPNMVPAG-AISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIA 68
           LS +  +   P+++PA  A ++  +  V  +   C   G  ++G+A R I+ G ADVM A
Sbjct: 135 LSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTS-GLDSVGNAVRAIEEGSADVMFA 193
Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           GAA++ I+ + +A F  +RA  T  N++P  ASRPFD  RDGFV+ EG+A+ VLE+ D A
Sbjct: 194 GAADTPITPIVVACFDAIRA-TTARNDDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSA 252
Query: 129 LARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQ 188
           LAR A I+AEI GY                    + + Y +T                  
Sbjct: 253 LARGARIHAEISGYA------------------TRCNAYHMT------------------ 276
Query: 189 GPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAH 248
                            G+  DG      RE      +A+  +  DA     DI YINAH
Sbjct: 277 -----------------GLKADG------REMAETIRVALDESRTDAT----DIDYINAH 309
Query: 249 ATSTPLGDVIELKAIGSLF--PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVP 306
            + T   D  E  A        A+R  VSS K           +LE A  +LA+  G+VP
Sbjct: 310 GSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVP 369
Query: 307 PNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS 359
           P  NL     E      P    E K    R  L    GFGG  + + + + ++
Sbjct: 370 PTANLRTSDPECDLDYVPLEARERKL---RSVLTVGSGFGGFQSAMVLRDAET 419

>pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 89/144 (61%), Gaps = 3/144 (2%)
Query: 2   LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQG 60
           L  G    +SP+FV     NMV AG ++I    +  ++ +      G H IG A R+I  
Sbjct: 136 LMNGGPRKISPFFVPSTIVNMV-AGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAY 194
Query: 61  GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
           G ADVM+AG AE   + L +  F   RAL+T+ N+ P  ASRP+DK RDGFV+G+G+ +L
Sbjct: 195 GDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGML 253
Query: 121 VLEELDHALARSANIYAEIIGYGM 144
           VLEE +HA  R A IYAE++G+GM
Sbjct: 254 VLEEYEHAKKRGAKIYAELVGFGM 277

>pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Query: 205 IGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG 264
            GMS D +H+TSP E+G GA LAM  AL DA +    I Y+NAH TSTP GD  E +A+ 
Sbjct: 275 FGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVK 334
Query: 265 SLF--PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE 322
           ++F   A R++VSSTK            +ES ++ILA+ +  VPP +NL++P E      
Sbjct: 335 TIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDF 394
Query: 323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE 356
            P    +    G    L NSFGFGGTN  L   +
Sbjct: 395 VPHEARQ--VSGMEYTLCNSFGFGGTNGSLIFKK 426

>pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427

Iteration: 1
 Score =  117 bits (294), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 65/144 (45%), Positives = 89/144 (61%), Gaps = 3/144 (2%)
Query: 2   LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQG 60
           L  G    +SP+FV     NMV AG ++I    +  ++ +      G H IG A R+I  
Sbjct: 136 LMNGGPRKISPFFVPSTIVNMV-AGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIAY 194
Query: 61  GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
           G ADVM+AG AE   + L +  F   RAL+T+ N+ P  ASRP+DK RDGFV+G+G+ +L
Sbjct: 195 GDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGML 253
Query: 121 VLEELDHALARSANIYAEIIGYGM 144
           VLEE +HA  R A IYAE++G+GM
Sbjct: 254 VLEEYEHAKKRGAKIYAELVGFGM 277

>pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427

Iteration: 1
 Score = 95.1 bits (235), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 65/154 (42%), Positives = 86/154 (55%), Gaps = 4/154 (2%)
Query: 205 IGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG 264
            GMS D +H+TSP E+G GA LAM  AL DA +    I Y+NAH TSTP GD  E +A+ 
Sbjct: 275 FGMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVK 334
Query: 265 SLF--PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE 322
           ++F   A R++VSSTK            +ES ++ILA+ +  VPP +NL++P E      
Sbjct: 335 TIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDF 394
Query: 323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE 356
            P    +    G    L NSFGFGGTN  L   +
Sbjct: 395 VPHEARQ--VSGMEYTLCNSFGFGGTNGSLIFKK 426

>pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 62/134 (46%), Positives = 88/134 (65%), Gaps = 7/134 (5%)
Query: 15  VNPFF-PNMVP---AGAISIDMDSK-VQTLCVYCLCYGGHAIGDAFRLIQGGHADVMIAG 69
           V+PFF P  +P   +G +SI   +K + +  V       ++IGDAF++I+ G AD  I G
Sbjct: 130 VSPFFVPXXIPDXGSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAXITG 189
Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
            AE+ I++ S+A F   +AL+   N +P  A RPFDK RDGF++GEG+ I++LEE +HA 
Sbjct: 190 GAEAPITKXSLAGFTANKALS--LNPDPETACRPFDKDRDGFIIGEGAGIVILEEYEHAK 247
Query: 130 ARSANIYAEIIGYG 143
           AR A IYAEI+GYG
Sbjct: 248 ARGAKIYAEIVGYG 261

>pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413

Iteration: 1
 Score = 97.1 bits (240), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 55/150 (36%), Positives = 82/150 (54%), Gaps = 5/150 (3%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G +GD +H+T+P  +G GA  A   A+ DA L+P  + YINAH TSTP  D  E +AI +
Sbjct: 261 GATGDAYHITAPAPNGEGAARAXKXAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKT 320
Query: 266 LF--PAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +F   A++L +SSTK            +E+ F +L + + ++ P ++L++  E       
Sbjct: 321 VFGEHAKKLAISSTKSXTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYV 380
Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLC 353
           P    E   +   V + NSFGFGG NA L 
Sbjct: 381 PNEAREANVN---VVISNSFGFGGHNATLV 407

>pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
Query: 2   LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGH-AIGDAFRLIQG 60
           L+      + P  +    PNM  +G +++   +      +   C   + AIGDAFR I+ 
Sbjct: 141 LHEKGPKRVKPMTLPKALPNMA-SGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKF 199
Query: 61  GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
           G  DVM+ G  E+ I+  +IA F  + AL+T    +P +AS PFDK R+GFVMGEGS +L
Sbjct: 200 GFQDVMLVGGTEASITPFAIAGFQALTALST--TEDPTRASIPFDKDRNGFVMGEGSGML 257
Query: 121 VLEELDHALARSANIYAEIIGYG 143
           VLE L+HA  R A I AE++GYG
Sbjct: 258 VLESLEHAEKRGATILAEVVGYG 280

>pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430

Iteration: 1
 Score = 72.8 bits (177), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/155 (32%), Positives = 77/155 (49%), Gaps = 6/155 (3%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G + D +H+TSP  +G+GA+ A+  AL +A +SP  ++Y+NAH TSTP  +  E  AI +
Sbjct: 280 GNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVA 339
Query: 266 LFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY-ECP 324
           +   + + VSSTK            +E+  TI A+    VP    +     E   Y E  
Sbjct: 340 VL-GKEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVP----MTAGTSEVSDYIEAN 394
Query: 325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS 359
               +        A+ N+FGFGG NA L    +++
Sbjct: 395 VVYGQGLEKEIPYAISNTFGFGGHNAVLAFKRWEN 429

>pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
Query: 2   LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGH-AIGDAFRLIQG 60
           L+      + P  +    PNM  +G +++   +      +   C   + AIGDAFR I+ 
Sbjct: 142 LHEKGPKRVKPMTLPKALPNMA-SGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKF 200
Query: 61  GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
           G  DVM+ G  E+ I+  +IA F  + AL+T    +P +AS PFDK R+GFVMGEGS +L
Sbjct: 201 GFQDVMLVGGTEASITPFAIAGFQALTALST--TEDPTRASIPFDKDRNGFVMGEGSGML 258
Query: 121 VLEELDHALARSANIYAEIIGYG 143
           VLE L+HA  R A I AE++GYG
Sbjct: 259 VLESLEHAEKRGATILAEVVGYG 281

>pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431

Iteration: 1
 Score = 69.7 bits (169), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/155 (31%), Positives = 76/155 (49%), Gaps = 6/155 (3%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G + D +H+TSP  +G+GA+ A+  AL +A +SP  ++Y+NA  TSTP  +  E  AI +
Sbjct: 281 GNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAAGTSTPANEKGESGAIVA 340
Query: 266 LFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY-ECP 324
           +   + + VSSTK            +E+  TI A+    VP    +     E   Y E  
Sbjct: 341 VL-GKEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVP----MTAGTSEVSDYIEAN 395
Query: 325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS 359
               +        A+ N+FGFGG NA L    +++
Sbjct: 396 VVYAQGLEKEIPYAISNTFGFGGHNAVLAFKRWEN 430

>pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428

Iteration: 1
 Score =  103 bits (257), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 59/143 (41%), Positives = 83/143 (58%), Gaps = 4/143 (2%)
Query: 2   LYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGH-AIGDAFRLIQG 60
           L+      + P  +    PNM  +G +++   +      +   C   + AIGDAFR I+ 
Sbjct: 141 LHEKGPKRVKPMTLPKALPNMA-SGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKF 199
Query: 61  GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
           G  DVM+ G  E+ I+  +IA F  + AL+T    +P +AS PFDK R+GFVMGEGS +L
Sbjct: 200 GFQDVMLVGGTEASITPFAIAGFQALTALST--TEDPTRASIPFDKDRNGFVMGEGSGML 257
Query: 121 VLEELDHALARSANIYAEIIGYG 143
           VLE L+HA  R A I AE++GYG
Sbjct: 258 VLESLEHAEKRGATILAEVVGYG 280

>pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428

Iteration: 1
 Score = 72.0 bits (175), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 50/153 (32%), Positives = 75/153 (49%), Gaps = 6/153 (3%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G + D +H+TSP  +G+GA+ A+  AL +A +SP  ++Y+NAH TSTP  +  E  AI +
Sbjct: 280 GNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVA 339
Query: 266 LFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY-ECP 324
           +   + + VSSTK            +E+  TI A+    VP    +     E   Y E  
Sbjct: 340 VL-GKAVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVP----MTAGTSEVSDYIEAN 394
Query: 325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
               +        A+ N+FGFGG NA L    +
Sbjct: 395 VVYGQGLAKEIPYAISNTFGFGGHNAVLAFKRW 427

>pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416

Iteration: 1
 Score = 98.6 bits (244), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQ 59
           ++  G    +SP  V    PN   A  I + + ++   +     C  G  AI  A+R I 
Sbjct: 128 LMNAGGPRKVSPLAVQMIMPNGA-AAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIV 186
Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G ADV + G  E  I  L IAAF  +RA++T+ N+EP +ASRPFDK RDGFV GE  A+
Sbjct: 187 MGDADVAVCGGVEGPIEALPIAAFSMMRAMSTR-NDEPERASRPFDKDRDGFVFGEAGAL 245
Query: 120 LVLEELDHALARSANIYAEIIGYGM 144
           +++E  +HA AR A   A ++G G+
Sbjct: 246 MLIETEEHAKARGAKPLARLLGAGI 270

>pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416

Iteration: 1
 Score = 94.4 bits (233), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G++ D  H+ +P  DG  A  AMTR+L  A LSP DI ++NAH T+TP+GD  E  AI  
Sbjct: 269 GITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAI-R 327
Query: 266 LFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
           +    +  V + K            LES  T+L + +G++PP +N E P  E    +   
Sbjct: 328 VAGCDQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPE---IDLDV 384
Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
              E +    R A+ NSFGFGG N  L    Y
Sbjct: 385 VAGEPRYGDYRYAVNNSFGFGGHNVALAFGRY 416

>pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434

Iteration: 1
 Score = 97.4 bits (241), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 57/142 (40%), Positives = 80/142 (56%), Gaps = 3/142 (2%)
Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQ 59
           M  RG    +SP  V  + PN   A A+ ++  +K   +     C  G  AI  A++ I 
Sbjct: 145 MRARG-MKAVSPLTVQKYMPNGA-AAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIV 202
Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G AD  I G  E+ I  + IA F ++R + +  N++PA A RPFD+ RDGFV GEG A+
Sbjct: 203 LGEADAAICGGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGGAL 262
Query: 120 LVLEELDHALARSANIYAEIIG 141
           L++E  +HA AR ANI A I+G
Sbjct: 263 LLIETEEHAKARGANILARIMG 284

>pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434

Iteration: 1
 Score = 90.9 bits (224), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 79/151 (52%), Gaps = 3/151 (1%)
Query: 207 MSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSL 266
           ++ DG H+ +P  +G  A  A+TRA+  A L+PGDI ++NAHAT T +GD+ E +AI + 
Sbjct: 287 ITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINNA 346
Query: 267 FPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTA 326
               R  V + K            +ES  T+LA+ + ++PP +NL +   E    +    
Sbjct: 347 LGGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPE---IDLDVV 403
Query: 327 VTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
             E +    R A+ NSFGFGG N  +    Y
Sbjct: 404 AGEPRPGNYRYAINNSFGFGGHNVAIAFGRY 434

>pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416

Iteration: 1
 Score = 97.4 bits (241), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 57/145 (39%), Positives = 81/145 (55%), Gaps = 3/145 (2%)
Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLC-VYCLCYGGHAIGDAFRLIQ 59
           ++  G    +SP  V    PN   A  I + + ++   +  V     G  AI  A+R I 
Sbjct: 128 LMNAGGPRKVSPLAVQMIMPNGA-AAVIGLQLGARAGVMTPVSAQSSGSEAIAHAWRQIV 186
Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G ADV + G  E  I  L IAAF  +RA++T+ N+EP +ASRPFDK RDGFV GE  A+
Sbjct: 187 MGDADVAVCGGVEGPIEALPIAAFSMMRAMSTR-NDEPERASRPFDKDRDGFVFGEAGAL 245
Query: 120 LVLEELDHALARSANIYAEIIGYGM 144
           +++E  +HA AR A   A ++G G+
Sbjct: 246 MLIETEEHAKARGAKPLARLLGAGI 270

>pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416

Iteration: 1
 Score = 94.7 bits (234), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 56/152 (36%), Positives = 77/152 (50%), Gaps = 4/152 (2%)
Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G++ D  H+ +P  DG  A  AMTR+L  A LSP DI ++NAH T+TP+GD  E  AI  
Sbjct: 269 GITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAI-R 327
Query: 266 LFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
           +    +  V + K            LES  T+L + +G++PP +N E P  E    +   
Sbjct: 328 VAGCDQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPE---IDLDV 384
Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
              E +    R A+ NSFGFGG N  L    Y
Sbjct: 385 VAGEPRYGDYRYAVNNSFGFGGHNVALAFGRY 416

>pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A+ +IQ G  D M AG  E     LS+  F  + A+++++N+ P+ ASR +DK R
Sbjct: 187 HCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVL-FDAMGAMSSKYNDTPSTASRAYDKNR 245
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G+ +LVLE+L+ ALAR A IY EI+GYG
Sbjct: 246 DGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYG 280

>pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428

Iteration: 1
 Score = 64.3 bits (155), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 79/180 (43%), Gaps = 29/180 (16%)
Query: 194 VSTACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA 247
           + TA A GA         G + DG+ + +P   G GA+  M  AL   +     I YIN 
Sbjct: 262 LETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMAL---STVTSKIDYINP 316
Query: 248 HATSTPLGDVIELKAIGSLFPAQRLM--VSSTKXXXXXXXXXXXNLESAFTILAVHEGLV 305
           HATSTP GD  E++AI  +F A  +   +++TK             E+ +++L +    +
Sbjct: 317 HATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFI 376
Query: 306 PPNVNLEDPCEEAGGYECPTAVTEWKTDGRRV-------ALKNSFGFGGTNACLCIAEYK 358
                    CE A   E   A  +     +R+        L NSFGFGGTNA L    Y+
Sbjct: 377 ---------CESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRYQ 427

>pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411

Iteration: 1
 Score = 94.0 bits (232), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 46/95 (48%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A+ +IQ G  D M AG  E     LS+  F  + A+++++N+ P+ ASR +DK R
Sbjct: 170 HCIGNAYEMIQYGKQDRMFAGGCEDLDWTLSVL-FDAMGAMSSKYNDTPSTASRAYDKNR 228
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G+ +LVLE+L+ ALAR A IY EI+GYG
Sbjct: 229 DGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYG 263

>pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/180 (30%), Positives = 79/180 (43%), Gaps = 29/180 (16%)
Query: 194 VSTACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA 247
           + TA A GA         G + DG+ + +P   G GA+  M  AL   +     I YIN 
Sbjct: 245 LETALARGAKIYGEIVGYGATSDGYDMVAP--SGEGAIRCMKMAL---STVTSKIDYINP 299
Query: 248 HATSTPLGDVIELKAIGSLFPAQRLM--VSSTKXXXXXXXXXXXNLESAFTILAVHEGLV 305
           HATSTP GD  E++AI  +F A  +   +++TK             E+ +++L +    +
Sbjct: 300 HATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFI 359
Query: 306 PPNVNLEDPCEEAGGYECPTAVTEWKTDGRRV-------ALKNSFGFGGTNACLCIAEYK 358
                    CE A   E   A  +     +R+        L NSFGFGGTNA L    Y+
Sbjct: 360 ---------CESAHIEELDPAFADMPIVRKRIDNVQLNTVLSNSFGFGGTNATLVFQRYQ 410

>pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A   IQ G  D++ AG  E    +++   F  + AL+T++N+ P +ASR +D  R
Sbjct: 168 HCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHR 226
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G  ++V+EEL+HALAR A+IYAEI+GYG
Sbjct: 227 DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYG 261

>pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 14/168 (8%)
Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GAH        G + DG  + +P   G GA+  M  A+   + +P  I Y+N+H T
Sbjct: 246 ALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVD-TP--IDYLNSHGT 300
Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F  +   +S+TK             E+ +++L +  G + P++N
Sbjct: 301 STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 360
Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           +E+  E+A G    T  T+ +       + NSFGFGGTNA L + + K
Sbjct: 361 IEELDEQAAGLNIVTETTDREL---TTVMSNSFGFGGTNATLVMRKLK 405

>pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A   IQ G  D++ AG  E    +++   F  + AL+T++N+ P +ASR +D  R
Sbjct: 180 HCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHR 238
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G  ++V+EEL+HALAR A+IYAEI+GYG
Sbjct: 239 DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYG 273

>pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418

Iteration: 1
 Score = 84.0 bits (206), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GAH        G + DG  + +P   G GA+  M  A+   + +P  I Y+N+H T
Sbjct: 258 ALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVD-TP--IDYLNSHGT 312
Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F  +   +S+T              E+ +++L +  G + P++N
Sbjct: 313 STPVGDVKELAAIREVFGDKSPAISATAAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 372
Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           +E+  E+A G    T  T+ +       + NSFGFGGTNA L + + K
Sbjct: 373 IEELDEQAAGLNIVTETTDREL---TTVMSNSFGFGGTNATLVMRKLK 417

>pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A   IQ G  D++ AG  E    +++   F  + AL+T++N+ P +ASR +D  R
Sbjct: 168 HCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHR 226
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G  ++V+EEL+HALAR A+IYAEI+GYG
Sbjct: 227 DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYG 261

>pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 14/168 (8%)
Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GAH        G + DG  + +P   G GA+  M  A+   + +P  I Y+N+H T
Sbjct: 246 ALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVD-TP--IDYLNSHGT 300
Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F  +   +S+TK             E+ +++L +  G + P++N
Sbjct: 301 STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 360
Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           +E+  E+A G    T  T+ +       + NSFGFGGTNA L + + K
Sbjct: 361 IEELDEQAAGLNIVTETTDREL---TTVMSNSFGFGGTNATLVMRKLK 405

>pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A   IQ G  D++ AG  E    +++   F  + AL+T++N+ P +ASR +D  R
Sbjct: 168 HCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHR 226
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G  ++V+EEL+HALAR A+IYAEI+GYG
Sbjct: 227 DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYG 261

>pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 14/168 (8%)
Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GAH        G + DG  + +P   G GA+  M  A+   + +P  I Y+N+H T
Sbjct: 246 ALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVD-TP--IDYLNSHGT 300
Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F  +   +S+TK             E+ +++L +  G + P++N
Sbjct: 301 STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 360
Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           +E+  E+A G    T  T+ +       + NSFGFGGTNA L + + K
Sbjct: 361 IEELDEQAAGLNIVTETTDREL---TTVMSNSFGFGGTNATLVMRKLK 405

>pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A   IQ G  D++ AG  E    +++   F  + AL+T++N+ P +ASR +D  R
Sbjct: 180 HCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHR 238
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G  ++V+EEL+HALAR A+IYAEI+GYG
Sbjct: 239 DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYG 273

>pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418

Iteration: 1
 Score = 83.2 bits (204), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GAH        G + DG  + +P   G GA+  M  A+   + +P  I Y+N+  T
Sbjct: 258 ALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVD-TP--IDYLNSEGT 312
Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F  +   +S+TK             E+ +++L +  G + P++N
Sbjct: 313 STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 372
Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           +E+  E+A G    T  T+ +       + NSFGFGGTNA L + + K
Sbjct: 373 IEELDEQAAGLNIVTETTDREL---TTVMSNSFGFGGTNATLVMRKLK 417

>pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A   IQ G  D++ AG  E    +++   F  + AL+T++N+ P +ASR +D  R
Sbjct: 180 HCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHR 238
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G  ++V+EEL+HALAR A+IYAEI+GYG
Sbjct: 239 DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYG 273

>pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418

Iteration: 1
 Score = 83.6 bits (205), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 86/168 (51%), Gaps = 14/168 (8%)
Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GAH        G + DG  + +P   G GA+  M  A+   + +P  I Y+N+  T
Sbjct: 258 ALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVD-TP--IDYLNSQGT 312
Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F  +   +S+TK             E+ +++L +  G + P++N
Sbjct: 313 STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 372
Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           +E+  E+A G    T  T+ +       + NSFGFGGTNA L + + K
Sbjct: 373 IEELDEQAAGLNIVTETTDREL---TTVMSNSFGFGGTNATLVMRKLK 417

>pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418

Iteration: 1
 Score = 92.8 bits (229), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A   IQ G  D++ AG  E    +++   F  + AL+T++N+ P +ASR +D  R
Sbjct: 180 HCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHR 238
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G  ++V+EEL+HALAR A+IYAEI+GYG
Sbjct: 239 DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYG 273

>pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418

Iteration: 1
 Score = 86.7 bits (213), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 14/168 (8%)
Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GAH        G + DG  + +P   G GA+  M  A+   + +P  I Y+N+H T
Sbjct: 258 ALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVD-TP--IDYLNSHGT 312
Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F  +   +S+TK             E+ +++L +  G + P++N
Sbjct: 313 STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 372
Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           +E+  E+A G    T  T+ +       + NSFGFGGTNA L + + K
Sbjct: 373 IEELDEQAAGLNIVTETTDREL---TTVMSNSFGFGGTNATLVMRKLK 417

>pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A   IQ G  D++ AG  E    +++   F  + AL+T++N+ P +ASR +D  R
Sbjct: 168 HCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHR 226
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G  ++V+EEL+HALAR A+IYAEI+GYG
Sbjct: 227 DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYG 261

>pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 56/168 (33%), Positives = 87/168 (51%), Gaps = 14/168 (8%)
Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GAH        G + DG  + +P   G GA+  M  A+   + +P  I Y+N+H T
Sbjct: 246 ALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVD-TP--IDYLNSHGT 300
Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F  +   +S+T+             E+ +++L +  G + P++N
Sbjct: 301 STPVGDVKELAAIREVFGDKSPAISATRAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 360
Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           +E+  E+A G    T  T+ +       + NSFGFGGTNA L + + K
Sbjct: 361 IEELDEQAAGLNIVTETTDREL---TTVMSNSFGFGGTNATLVMRKLK 405

>pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406

Iteration: 1
 Score = 92.4 bits (228), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 45/95 (47%), Positives = 65/95 (68%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG+A   IQ G  D++ AG  E    +++   F  + AL+T++N+ P +ASR +D  R
Sbjct: 168 HCIGNAVEQIQLGKQDIVFAGGGEELCWEMA-CEFDAMGALSTKYNDTPEKASRTYDAHR 226
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G  ++V+EEL+HALAR A+IYAEI+GYG
Sbjct: 227 DGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYG 261

>pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406

Iteration: 1
 Score = 86.3 bits (212), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 57/168 (33%), Positives = 87/168 (51%), Gaps = 14/168 (8%)
Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GAH        G + DG  + +P   G GA+  M  A+   + +P  I Y+N+H T
Sbjct: 246 ALARGAHIYAEIVGYGATSDGADMVAP--SGEGAVRCMKMAMHGVD-TP--IDYLNSHGT 300
Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F  +   +S+TK             E+ +++L +  G + P++N
Sbjct: 301 STPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSIN 360
Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           +E+  E+A G    T  T+ +       + NSFGFGGTNA L + + K
Sbjct: 361 IEELDEQAAGLNIVTETTDREL---TTVMSNSFGFGGTNATLVMRKLK 405

>pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412

Iteration: 1
 Score = 89.4 bits (220), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/144 (40%), Positives = 83/144 (57%), Gaps = 4/144 (2%)
Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQ 59
           ML  G+ T ++        P+   A  +S+  D K + +     C  G  AIG A+  I 
Sbjct: 125 MLESGSMTDVTSNSYVQMMPHTT-AVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIA 183
Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G   +M+AG AE  +S  ++A F  + A +T+ N+EP    RPFD +RDG V+GEG+A 
Sbjct: 184 MGKQTLMLAGGAEE-LSGPAVAVFDTLYATSTR-NDEPHLTPRPFDAKRDGLVVGEGAAT 241
Query: 120 LVLEELDHALARSANIYAEIIGYG 143
           LVLEE +HA AR A I+AEI+G+G
Sbjct: 242 LVLEEYEHAKARGATIHAEIVGFG 265

>pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412

Iteration: 1
 Score = 59.7 bits (143), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 48/160 (30%), Positives = 66/160 (41%), Gaps = 17/160 (10%)
Query: 205 IGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG 264
            G + DG H+T P         AM  AL DA L    I+Y+NAH TST  GDV E +A  
Sbjct: 264 FGCNSDGAHMTQPTASTMA--RAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATA 321
Query: 265 SLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLED------PCEEA 318
             F  +R+ +SS K            LE+ +TI  +      P +NL +      P +  
Sbjct: 322 RTF-GERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDYI 380
Query: 319 GGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
            G        E +       + N+F FGG N  L     +
Sbjct: 381 RG--------EARAIDAEYVMSNNFAFGGINTSLIFRRVR 412

>pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410

Iteration: 1
 Score = 87.4 bits (215), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 47/95 (49%), Positives = 64/95 (67%), Gaps = 1/95 (1%)
Query: 49  HAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRR 108
           H IG A  LIQ G  D++ AG  E    + +   F    AL+T++N+ PA+ASR +D+ R
Sbjct: 172 HCIGHALELIQLGKQDIVFAGGGEELCWEXA-CEFDAXGALSTKYNDTPAKASRTYDQDR 230
Query: 109 DGFVMGEGSAILVLEELDHALARSANIYAEIIGYG 143
           DGFV+  G   +V+EEL+HALAR A+IYAEI+GYG
Sbjct: 231 DGFVIAGGGGXVVVEELEHALARGAHIYAEIVGYG 265

>pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410

Iteration: 1
 Score = 79.7 bits (195), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 58/168 (34%), Positives = 80/168 (47%), Gaps = 14/168 (8%)
Query: 197 ACATGAH------AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           A A GAH        G + DG    +P  +G         A +D   +P  I Y N H T
Sbjct: 250 ALARGAHIYAEIVGYGATSDGADXVAPSGEGAVRCXQXAXAGVD---TP--IDYXNVHGT 304
Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVN 310
           STP+GDV EL AI  +F      +SSTK             E+ F++L V  G + P++N
Sbjct: 305 STPVGDVKELGAIREVFGNNTPAISSTKAXTGHSLGAAGVHEAIFSLLXVEHGFIAPSIN 364
Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           +++  E+A G    T  T+ +         NSFGFGGTNA L   +Y+
Sbjct: 365 IDNLDEQAQGXNIITETTQREL---TTVXSNSFGFGGTNATLVXRKYQ 409

>pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 70/161 (43%), Gaps = 12/161 (7%)
Query: 204 AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAI 263
           A+   G  + LT+P   G      + RAL +A +  GD+ Y+ AH T T LGD IE+ A+
Sbjct: 292 AVNQDGASNGLTAP--SGPAQQRVIRRALENAGVRAGDVDYVEAHGTGTRLGDPIEVHAL 349
Query: 264 GSLFPAQR-----LMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEEA 318
            S + A+R     L + S K                  +LA+  G  P  ++ ++P  + 
Sbjct: 350 LSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVXKAVLALRHGEXPRTLHFDEPSPQI 409
Query: 319 ----GGYECPTAVTEWKTDGR-RVALKNSFGFGGTNACLCI 354
               G     +    W    R R A  +SFG  GTNA + +
Sbjct: 410 EWDLGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIV 450

>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 44/163 (26%), Positives = 68/163 (41%), Gaps = 12/163 (7%)
Query: 204 AIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAI 263
           A+   G  + L++P   G      + +AL    L PGD+  + AH T T LGD IE  A+
Sbjct: 270 ALNQDGASNGLSAP--SGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDPIEANAL 327
Query: 264 GSLFPAQR-----LMVSSTKXXXXXXXXXXXNLESAFTILAVHEGLVPPNVNLEDPCEE- 317
              +   R     L + S K                  +LA+  G +P  +++E+P    
Sbjct: 328 LDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHV 387
Query: 318 ---AGGYECPTAVTEWKTDGR-RVALKNSFGFGGTNACLCIAE 356
              +GG         W+   R R A  ++FG  GTNA + + E
Sbjct: 388 DWSSGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEE 430

>pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 60/121 (49%), Gaps = 5/121 (4%)
Query: 23  VPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIAGAAESCISQLSIA 81
           V  G ISI    +  +  +     GG  A+G A R I+ G   ++++G  +S +      
Sbjct: 147 VNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRGTP-LVVSGGVDSALDPWGWV 205
Query: 82  AFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSA-NIYAEII 140
           +      ++T    +P +A  PFD+R  G+V GEG AILVLE+   A AR   + Y E+ 
Sbjct: 206 SQIASGRISTA--TDPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELA 263
Query: 141 G 141
           G
Sbjct: 264 G 264

>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965

Iteration: 1
 Score = 43.9 bits (102), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 37/126 (29%), Positives = 51/126 (40%), Gaps = 7/126 (5%)
Query: 235 ANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQR---LMVSSTKXXXXXXXXXXXNL 291
           A ++P    YI AH T T +GD  EL  I     A R   L++ STK             
Sbjct: 282 AGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLA 341
Query: 292 ESAFTILAVHEGLVPPNVNLEDPCEEAGGY---ECPTAVTEWKTDGRRVALKNSFGFGGT 348
             A  +L++  GL  PN++   P  E                   G  V + NSFGFGG+
Sbjct: 342 ALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVRGGNVGI-NSFGFGGS 400
Query: 349 NACLCI 354
           N  + +
Sbjct: 401 NVHIIL 406

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	359
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	1e-114
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	2e-19
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	2e-88
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	5e-14
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	9e-86
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	4e-15
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	5e-67
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	3e-59
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	2e-20
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	3e-64
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	3e-61
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	2e-20
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	1e-63
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	1e-58
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	7e-18
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	2e-62
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	1e-60
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	1e-18
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	7e-62
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	4e-61
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	2e-19
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	4e-61
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	5e-58
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	6e-18
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	6e-61
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	1e-57
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	2e-17
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	1e-60
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	5e-57
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	2e-17
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	3e-60
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	7e-57
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	2e-17
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	5e-60
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	1e-56
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	3e-17
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	7e-60
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	1e-56
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	2e-17
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	1e-59
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	2e-56
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	2e-17
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	2e-59
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	1e-53
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	2e-18
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	9e-59
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	1e-58
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	1e-16
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	4e-58
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	2e-53
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	9e-19
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	1e-56
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	3e-54
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	5e-18
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	2e-56
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	8e-55
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	3e-17
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	2e-24
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	2e-07
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	1e-19
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	3e-18
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	4e-18
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-05
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-04

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score =  362 bits (931), Expect = e-114
 Identities = 67/387 (17%), Positives = 116/387 (29%), Gaps = 44/387 (11%)

Query: 11   SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIAG 69
            +       F N + A    + + S          C     ++      I  G A + I G
Sbjct: 1073 NDILQ-ESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVG 1131

Query: 70   AAESCISQLSIAAFCRVRALATQFN-----NEPAQASRPFDKRRDGFVMGEGSAILVLEE 124
              +          F  ++A +           PA+ SRP    R+GF+  +G+ I ++ +
Sbjct: 1132 GYDDFQE-EGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQ 1190

Query: 125  LDHALARSANIYAEIIGYGMID---------------------LSDVLSSNNALQGSYNK 163
             D AL     IY  +                             S V  ++  L   Y K
Sbjct: 1191 ADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRK 1250

Query: 164  LSPYFVTRILPNMSAGQISI--EHGFQGPNHCVS------TACATGAHAIGMSGDGHHLT 215
                     + +    ++        + P+   +      T          +        
Sbjct: 1251 RQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWG 1310

Query: 216  SPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLF------PA 269
            +        +  +  AL    L+  D+   + H TST   D  E   I  +         
Sbjct: 1311 NDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEG 1370

Query: 270  QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE-CPTAVT 328
              ++    K   GH  GAAG       +  ++ G++P N N ++  +    +E       
Sbjct: 1371 NPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSK 1430

Query: 329  EWKTDGRRVALKNSFGFGGTNACLCIA 355
              KTDG R     SFGFG       + 
Sbjct: 1431 TLKTDGVRAVSITSFGFGQKGGQAIVV 1457

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688

 Score = 89.2 bits (221), Expect = 2e-19
 Identities = 24/144 (16%), Positives = 40/144 (27%), Gaps = 39/144 (27%)

Query: 123  EELDHALA-RSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKL-------SPYFVTRILP 174
            E   +       N     +G G+          +AL+G +          +       + 
Sbjct: 1034 EMYKYVHVSEVGNCSGSGMG-GV----------SALRGMFKDRFKDEPVQNDILQESFIN 1082

Query: 175  NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALI- 233
             MSA    +     GP      ACAT   ++ +  +               +   +A I 
Sbjct: 1083 TMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVE--------------TILSGKARIC 1128

Query: 234  -----DANLSPGDISYINAHATST 252
                 D     G   + N  ATS 
Sbjct: 1129 IVGGYDDFQEEGSFEFGNMKATSN 1152

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887

 Score =  289 bits (742), Expect = 2e-88
 Identities = 68/387 (17%), Positives = 114/387 (29%), Gaps = 44/387 (11%)

Query: 11   SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG 69
            +       F N + A    + + S          C     ++      I  G A + I G
Sbjct: 1272 NDILQ-ESFINTMSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVG 1330

Query: 70   AAESCISQLSIAAFCRVRALATQFN-----NEPAQASRPFDKRRDGFVMGEGSAILVLEE 124
              +          F  ++A +           PA+ SRP    R+GF+  +G+ I ++ +
Sbjct: 1331 GYDDFQE-EGSFEFGNMKATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQ 1389

Query: 125  LDHALARSANIYAEIIGYGMID---------------------LSDVLSSNNALQGSYNK 163
             D AL     IY  +                             S V  ++  L   Y K
Sbjct: 1390 ADLALKMGVPIYGIVAMAATATDKIGRSVPAPGKGILTTAREHHSSVKYASPNLNMKYRK 1449

Query: 164  LSPYFVTRILPNMSAGQI--------SIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLT 215
                     + +    ++         I    Q       T          +        
Sbjct: 1450 RQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWG 1509

Query: 216  SPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLF------PA 269
            +        +  +  AL    L+  D+   + H TST   D  E   I  +         
Sbjct: 1510 NDFYKRDPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEG 1569

Query: 270  QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE-CPTAVT 328
              ++    K   GH  GAAG       +  ++ G++P N N ++  +    +E       
Sbjct: 1570 NPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSK 1629

Query: 329  EWKTDGRRVALKNSFGFGGTNACLCIA 355
              KTDG R     SFGFG       + 
Sbjct: 1630 TLKTDGVRAVSITSFGFGQKGGQAIVV 1656

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887

 Score = 72.7 bits (178), Expect = 5e-14
 Identities = 13/68 (19%), Positives = 20/68 (29%)

Query: 139  IIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTAC 198
              G GM  +S +              +       +  MSA    +     GP      AC
Sbjct: 1246 CSGSGMGGVSALRGMFKDRFKDEPVQNDILQESFINTMSAWVNMLLISSSGPIKTPVGAC 1305

Query: 199  ATGAHAIG 206
            AT   ++ 
Sbjct: 1306 ATSVESVD 1313

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878

 Score =  282 bits (722), Expect = 9e-86
 Identities = 71/393 (18%), Positives = 113/393 (28%), Gaps = 50/393 (12%)

Query: 11   SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG 69
                    F N + A    + + S          C     ++   +  I  G A V + G
Sbjct: 1247 KDILQ-ESFVNTMAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVG 1305

Query: 70   AA-----ESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEE 124
                   E      ++ A    +        EP + SRP    R+GF+  +G  + V+  
Sbjct: 1306 GFDDFQEEGSYEFANMGATSNAKEEFA-RGREPGEMSRPTSTTRNGFMESQGCGVQVIMT 1364

Query: 125  LDHALARSANIYAEII-------GYGM---------------------IDLSDVLSSNNA 156
               AL     IY  +          G                        L D+      
Sbjct: 1365 AQLALEMGVPIYGIVAMTSTATDKIGRSVPAPGQGVLTTAREKSGNFPSPLLDIKYRRRQ 1424

Query: 157  LQGSYNKLSPYFVT--RILPNMSAGQISIEHGFQGPNHCVSTACATGAH----AIGMSGD 210
            L+    ++  +  +    L    A   S      GP    +       H    A     +
Sbjct: 1425 LELRRQQIKQWKESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAE 1484

Query: 211  GHHLTSPREDGR-GALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLF-- 267
                       R   +  +  AL    L+  D+   + H TST   D  E   I      
Sbjct: 1485 AQTSFGNEFWRRDSRIAPLRGALATWGLTIDDLGVASFHGTSTVANDKNESDVICQQLKH 1544

Query: 268  ----PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE- 322
                    ++    K   GH  GAAG       +  ++ G+VP N N ++  +    ++ 
Sbjct: 1545 LGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNVDKVMEQFDY 1604

Query: 323  CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
                    KTDG +     SFGFG   A     
Sbjct: 1605 IVYPSRSIKTDGIKAFSVTSFGFGQKGAQAIGV 1637

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878

 Score = 76.1 bits (187), Expect = 4e-15
 Identities = 12/68 (17%), Positives = 19/68 (27%)

Query: 139  IIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTAC 198
             IG G+   S +                      +  M+A    +     GP      AC
Sbjct: 1221 CIGSGVGGTSALRGMYKDRYLDKPVQKDILQESFVNTMAAWVNMLLLSSTGPIKTPVGAC 1280

Query: 199  ATGAHAIG 206
            AT   ++ 
Sbjct: 1281 ATAVESLD 1288

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438

 Score =  217 bits (554), Expect = 5e-67
 Identities = 86/151 (56%), Positives = 100/151 (66%), Gaps = 2/151 (1%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G+SGD  H+T+P  +G GAL  M  AL DA + P +ISYINAHATSTPLGD  E KAI  
Sbjct: 285 GLSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYINAHATSTPLGDAAENKAIKH 344

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           LF   A  L VSSTKGA GHLLGAAG +E+AFT LA +   +PP +NL+    E      
Sbjct: 345 LFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYV 404

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCI 354
           P    EWKT+ R + L NSFGFGGTNA LCI
Sbjct: 405 PLKAQEWKTEKRFIGLTNSFGFGGTNATLCI 435

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438

 Score =  196 bits (501), Expect = 3e-59
 Identities = 73/136 (53%), Positives = 92/136 (67%), Gaps = 4/136 (2%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           +SP+FV     NM  AG +SI    K     V   C  G HA+GD+FR I  G ADVM+A
Sbjct: 154 VSPFFVPKILVNMA-AGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVA 212

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  +SCIS LS+A F R RAL+T  N++P  A RPF  +RDGFVMGEG+A+LVLEE +HA
Sbjct: 213 GGTDSCISPLSLAGFSRARALST--NSDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHA 270

Query: 129 LARSANIYAEIIGYGM 144
           + R A IYAE++GYG+
Sbjct: 271 VQRRARIYAEVLGYGL 286

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438

 Score = 90.7 bits (226), Expect = 2e-20
 Identities = 39/71 (54%), Positives = 48/71 (67%), Gaps = 1/71 (1%)

Query: 139 IIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTA 197
            IG GMI L  V  +        YNK+SP+FV +IL NM+AGQ+SI +  +GPNH VSTA
Sbjct: 128 AIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTA 187

Query: 198 CATGAHAIGMS 208
           C TGAHA+G S
Sbjct: 188 CTTGAHAVGDS 198

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431

 Score =  209 bits (534), Expect = 3e-64
 Identities = 78/153 (50%), Positives = 101/153 (66%), Gaps = 6/153 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GMSGD HH+T P EDG+GA+LAMTRAL  + L P  I Y+NAHATSTP+GD +E +AI +
Sbjct: 278 GMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKT 337

Query: 266 LF----PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY 321
           +F     +  L  SSTKGA GHLLGAAG +E+ F+ILA+H G+ P  +N+++P       
Sbjct: 338 VFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKR 397

Query: 322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCI 354
             P   ++      R A+ NSFGFGGTNA L  
Sbjct: 398 FMPLTTSKKML--VRTAMSNSFGFGGTNASLLF 428

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431

 Score =  201 bits (513), Expect = 3e-61
 Identities = 71/136 (52%), Positives = 90/136 (66%), Gaps = 2/136 (1%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           LSP+F+     NM  +G +S+    +         C  G H+IGDA R+IQ G ADVM+A
Sbjct: 145 LSPFFIPKILVNMA-SGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVA 203

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  ES I  LS+A F R RAL+T+FN+ P +ASRPFD  RDGFV+GEGS ++VLEE +HA
Sbjct: 204 GGTESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHA 263

Query: 129 LARSANIYAEIIGYGM 144
             R A IYAE+ GYGM
Sbjct: 264 KRRGAKIYAELCGYGM 279

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431

 Score = 90.7 bits (226), Expect = 2e-20
 Identities = 31/69 (44%), Positives = 49/69 (71%), Gaps = 1/69 (1%)

Query: 139 IIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTA 197
            IG G+  + D++ +   + +    +LSP+F+ +IL NM++G +S+++GFQGPNH   TA
Sbjct: 119 SIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTA 178

Query: 198 CATGAHAIG 206
           CATGAH+IG
Sbjct: 179 CATGAHSIG 187

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434

 Score =  207 bits (530), Expect = 1e-63
 Identities = 56/152 (36%), Positives = 82/152 (53%), Gaps = 3/152 (1%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
            ++ DG H+ +P  +G  A  A+TRA+  A L+PGDI ++NAHAT T +GD+ E +AI +
Sbjct: 286 SITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGDIDHVNAHATGTQVGDLAEGRAINN 345

Query: 266 LFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
                R  V + K A GH +GA G +ES  T+LA+ + ++PP +NL +   E        
Sbjct: 346 ALGGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLDVVAG 405

Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
                       A+ NSFGFGG N  +    Y
Sbjct: 406 EPRPGNYR---YAINNSFGFGGHNVAIAFGRY 434

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434

 Score =  195 bits (497), Expect = 1e-58
 Identities = 54/136 (39%), Positives = 78/136 (57%), Gaps = 2/136 (1%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           +SP  V  + PN   A A+ ++  +K   +     C  G  AI  A++ I  G AD  I 
Sbjct: 153 VSPLTVQKYMPNG-AAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAIC 211

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  E+ I  + IA F ++R + +  N++PA A RPFD+ RDGFV GEG A+L++E  +HA
Sbjct: 212 GGVETRIEAVPIAGFAQMRIVMSTNNDDPAGACRPFDRDRDGFVFGEGGALLLIETEEHA 271

Query: 129 LARSANIYAEIIGYGM 144
            AR ANI A I+G  +
Sbjct: 272 KARGANILARIMGASI 287

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434

 Score = 83.3 bits (207), Expect = 7e-18
 Identities = 14/50 (28%), Positives = 23/50 (46%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
                  +SP  V + +PN +A  + +E   +       +ACA+GA AI 
Sbjct: 146 RARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIA 195

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451

 Score =  205 bits (523), Expect = 2e-62
 Identities = 66/155 (42%), Positives = 96/155 (61%), Gaps = 5/155 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G + D +H+T+  +DG GA+ AM  AL   +++P  + Y+NAHATSTP+GD  E++A+ +
Sbjct: 292 GTTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVNAHATSTPVGDAGEIEALKT 351

Query: 266 LF-PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE-C 323
           +F       +SSTK A GHLLGAAG +E+AF+ILA+ +G++P  +NLE P   A G +  
Sbjct: 352 VFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLI 411

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
             A      +   +AL N FGFGG NA +    Y 
Sbjct: 412 GPAARHVPVE---IALSNGFGFGGVNASVLFRRYP 443

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451

 Score =  200 bits (510), Expect = 1e-60
 Identities = 69/136 (50%), Positives = 89/136 (65%), Gaps = 2/136 (1%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           LSP+ +  F  N+  AG ISI    +    C    C     AIGDA R+I+ G ADV++A
Sbjct: 159 LSPFTIPFFLSNLA-AGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLA 217

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G AE+   ++S+  F   RAL+T F+ EP +ASRPFD+ RDGFVMGEG+A++V+E LDHA
Sbjct: 218 GGAEAAFDKVSLGGFAAARALSTGFSEEPVRASRPFDRDRDGFVMGEGAAMVVVESLDHA 277

Query: 129 LARSANIYAEIIGYGM 144
           LAR A   AEIIGYG 
Sbjct: 278 LARGARPIAEIIGYGT 293

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451

 Score = 85.7 bits (213), Expect = 1e-18
 Identities = 23/50 (46%), Positives = 30/50 (60%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
                 +LSP+ +   L N++AGQISI+H F+GP  C  TACA    AIG
Sbjct: 152 ETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQAIG 201

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428

 Score =  203 bits (518), Expect = 7e-62
 Identities = 71/156 (45%), Positives = 92/156 (58%), Gaps = 6/156 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GMSGD  H+T+P E G GA   M  AL  A + P +I YINAH TST   D IEL A+  
Sbjct: 277 GMSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYINAHGTSTM-ADTIELGAVER 335

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +    A ++ +SSTK + GHLLGAAG  E+ F+ LA+ + + P  +NL++P  +      
Sbjct: 336 VVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLV 395

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS 359
           P    E K D   VAL NSFGFGGTNA L +  Y +
Sbjct: 396 PHKPRERKID---VALSNSFGFGGTNASLVLRRYTA 428

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428

 Score =  201 bits (513), Expect = 4e-61
 Identities = 72/136 (52%), Positives = 95/136 (69%), Gaps = 2/136 (1%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           +SP+F+     N+  +G +SI    +     V   C  G HAIGDA RLI  G ADVM+A
Sbjct: 144 ISPFFIPGRLINLA-SGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVA 202

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  ES +S++S+A F   +AL+T+ N++P  ASRP+D+ RDGFVMGEG+ I+VLEEL+HA
Sbjct: 203 GGTESPVSRISLAGFAACKALSTERNDDPTAASRPYDEDRDGFVMGEGAGIVVLEELEHA 262

Query: 129 LARSANIYAEIIGYGM 144
           LAR A IYAE+IGYGM
Sbjct: 263 LARGAKIYAEVIGYGM 278

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428

 Score = 87.6 bits (218), Expect = 2e-19
 Identities = 28/71 (39%), Positives = 45/71 (63%), Gaps = 1/71 (1%)

Query: 139 IIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTA 197
           +IG G+  +  ++ +   L      ++SP+F+   L N+++G +SI+H  +GPNH V TA
Sbjct: 118 LIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTA 177

Query: 198 CATGAHAIGMS 208
           CATG HAIG +
Sbjct: 178 CATGTHAIGDA 188

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416

 Score =  200 bits (512), Expect = 4e-61
 Identities = 60/152 (39%), Positives = 79/152 (51%), Gaps = 4/152 (2%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G++ D  H+ +P  DG  A  AMTR+L  A LSP DI ++NAH T+TP+GD  E  AI  
Sbjct: 269 GITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVNAHGTATPIGDAAEANAIRV 328

Query: 266 LFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
                +  V + K A GH +GA G LES  T+L + +G++PP +N E P  E        
Sbjct: 329 AG-CDQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAG 387

Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
                       A+ NSFGFGG N  L    Y
Sbjct: 388 EPRYGDYR---YAVNNSFGFGGHNVALAFGRY 416

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416

 Score =  192 bits (491), Expect = 5e-58
 Identities = 56/135 (41%), Positives = 77/135 (57%), Gaps = 3/135 (2%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG 69
           SP  V    PN   A  I + + ++   +     C  G  AI  A+R I  G ADV + G
Sbjct: 138 SPLAVQMIMPNG-AAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCG 196

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
             E  I  L IAAF  +RA++T+ N+EP +ASRPFDK RDGFV GE  A++++E  +HA 
Sbjct: 197 GVEGPIEALPIAAFSMMRAMSTR-NDEPERASRPFDKDRDGFVFGEAGALMLIETEEHAK 255

Query: 130 ARSANIYAEIIGYGM 144
           AR A   A ++G G+
Sbjct: 256 ARGAKPLARLLGAGI 270

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416

 Score = 83.3 bits (207), Expect = 6e-18
 Identities = 16/50 (32%), Positives = 26/50 (52%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
             G   K+SP  V  I+PN +A  I ++ G +       +AC++G+ AI 
Sbjct: 130 NAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIA 179

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430

 Score =  200 bits (511), Expect = 6e-61
 Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 4/153 (2%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G + D +H+TSP  +G+GA+ A+  AL +A +SP  ++Y+NAH TSTP  +  E  AI +
Sbjct: 280 GNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVA 339

Query: 266 LFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
           +   + + VSSTK   GHLLGAAG +E+  TI A+    VP      +  +         
Sbjct: 340 VL-GKEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYG 398

Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
              E +      A+ N+FGFGG NA L    ++
Sbjct: 399 QGLEKEIP---YAISNTFGFGGHNAVLAFKRWE 428

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430

 Score =  192 bits (490), Expect = 1e-57
 Identities = 59/136 (43%), Positives = 79/136 (58%), Gaps = 9/136 (6%)

Query: 15  VNPFF-----PNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIA 68
           V P       PNM  +G +++   +      +   C     AIGDAFR I+ G  DVM+ 
Sbjct: 149 VKPMTLPKALPNMA-SGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLV 207

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  E+ I+  +IA F  + AL+T    +P +AS PFDK R+GFVMGEGS +LVLE L+HA
Sbjct: 208 GGTEASITPFAIAGFQALTALST--TEDPTRASIPFDKDRNGFVMGEGSGMLVLESLEHA 265

Query: 129 LARSANIYAEIIGYGM 144
             R A I AE++GYG 
Sbjct: 266 EKRGATILAEVVGYGN 281

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430

 Score = 81.8 bits (203), Expect = 2e-17
 Identities = 14/50 (28%), Positives = 28/50 (56%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
            +    ++ P  + + LPNM++G +++  G  G    ++TAC++   AIG
Sbjct: 142 HEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIG 191

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416

 Score =  199 bits (509), Expect = 1e-60
 Identities = 70/155 (45%), Positives = 89/155 (57%), Gaps = 5/155 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
            M+ D +H+T+P  DGRGA  A+  AL D+ L P  +SYINAH TSTP  DV E +AI  
Sbjct: 265 AMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQ 324

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
                A  + VSSTK   GHLLG +G +E+  T++A+ E  VPP +NLE+P  E      
Sbjct: 325 ALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYV 384

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           P        D   VAL NSFGFGG N  L   +Y+
Sbjct: 385 PGQSRALIVD---VALSNSFGFGGHNVTLAFKKYQ 416

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416

 Score =  190 bits (484), Expect = 5e-57
 Identities = 69/135 (51%), Positives = 89/135 (65%), Gaps = 3/135 (2%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG 69
           SP+ +     NM  +G  +I++ +K    C    C  G +AIGDAFRL+Q G+A  MI G
Sbjct: 134 SPFMIPMMIANMA-SGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICG 192

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
             E+ I+ LS A F   RAL+ + N++P  ASRPFDK RDGFVMGEGS IL+LEEL+ AL
Sbjct: 193 GTEAAITPLSYAGFASARALSFR-NDDPLHASRPFDKDRDGFVMGEGSGILILEELESAL 251

Query: 130 ARSANIYAEIIGYGM 144
           AR A IY E++GY M
Sbjct: 252 ARGAKIYGEMVGYAM 266

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416

 Score = 81.4 bits (202), Expect = 2e-17
 Identities = 20/50 (40%), Positives = 33/50 (66%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
           L    ++ SP+ +  ++ NM++G  +I  G +GPN+C  TACA G++AIG
Sbjct: 126 LDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIG 175

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413

 Score =  198 bits (506), Expect = 3e-60
 Identities = 61/155 (39%), Positives = 90/155 (58%), Gaps = 5/155 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G +GD +H+T+P  +G GA  AM  A+ DA L+P  + YINAH TSTP  D  E +AI +
Sbjct: 261 GATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKT 320

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +F   A++L +SSTK   GH LGA+G +E+ F +L + + ++ P ++L++  E       
Sbjct: 321 VFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYV 380

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           P    E   +   V + NSFGFGG NA L     +
Sbjct: 381 PNEAREANVN---VVISNSFGFGGHNATLVFKRIE 412

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413

 Score =  189 bits (483), Expect = 7e-57
 Identities = 63/135 (46%), Positives = 88/135 (65%), Gaps = 4/135 (2%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG 69
           SP+FV    P+M  +G +SI   +K         C    ++IGDAF++I+ G AD MI G
Sbjct: 131 SPFFVPMMIPDMG-SGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAMITG 189

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
            AE+ I+++S+A F   +AL+   N +P  A RPFDK RDGF++GEG+ I++LEE +HA 
Sbjct: 190 GAEAPITKMSLAGFTANKALSL--NPDPETACRPFDKDRDGFIIGEGAGIVILEEYEHAK 247

Query: 130 ARSANIYAEIIGYGM 144
           AR A IYAEI+GYG 
Sbjct: 248 ARGAKIYAEIVGYGA 262

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413

 Score = 81.4 bits (202), Expect = 2e-17
 Identities = 21/50 (42%), Positives = 33/50 (66%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
           L   + ++SP+FV  ++P+M +GQ+SI  G +G N    TACAT  ++IG
Sbjct: 123 LNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIG 172

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437

 Score =  198 bits (506), Expect = 5e-60
 Identities = 62/155 (40%), Positives = 89/155 (57%), Gaps = 5/155 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G +GD +H+T+P  +G G   AM  A+ DA + P D+ Y+NAH TSTP+GD+ E+KAI +
Sbjct: 285 GTTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLNAHGTSTPVGDLNEVKAIKN 344

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
            F   A+ L VSSTK   GHLLGA G +E+ F+ L++ +  V P ++   P  E      
Sbjct: 345 TFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIV 404

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           P    +        A+ NS GFGG NA L   +++
Sbjct: 405 PNEAQDLDIT---YAMSNSLGFGGHNAVLVFKKFE 436

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437

 Score =  189 bits (483), Expect = 1e-56
 Identities = 65/135 (48%), Positives = 88/135 (65%), Gaps = 4/135 (2%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG 69
           SP+FV    P+M   G +SID+ +K         C  G ++IG+AF+++Q G AD MI G
Sbjct: 155 SPFFVPMLIPDMA-TGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITG 213

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
             E+ I+ ++IA F   RAL+T  N++   A RPF + RDGFVMGEG+ ILV+E L+ A 
Sbjct: 214 GTEAPITHMAIAGFSASRALST--NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQ 271

Query: 130 ARSANIYAEIIGYGM 144
           AR ANIYAEI+GYG 
Sbjct: 272 ARGANIYAEIVGYGT 286

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437

 Score = 81.5 bits (202), Expect = 3e-17
 Identities = 22/50 (44%), Positives = 35/50 (70%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
           +     ++SP+FV  ++P+M+ GQ+SI+ G +GPN    TACATG ++IG
Sbjct: 147 MDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIG 196

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408

 Score =  197 bits (503), Expect = 7e-60
 Identities = 78/151 (51%), Positives = 96/151 (63%), Gaps = 6/151 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G S D HH+T P  +G+GA LAM RAL DA ++P  + YINAH TSTP+GD  E+ AI  
Sbjct: 259 GRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKR 318

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +F   A+RLMVSSTK   GHLLGAAG +E+  T+ A++ G++PP +NLEDP  E      
Sbjct: 319 VFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFV 378

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCI 354
           P    E K D    AL NSF FGG NA L  
Sbjct: 379 PEPR-EAKVD---YALSNSFAFGGHNAVLAF 405

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408

 Score =  188 bits (481), Expect = 1e-56
 Identities = 60/135 (44%), Positives = 85/135 (62%), Gaps = 3/135 (2%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG 69
           SP+F+     NM  +  I++       +  V   C  G  A+G A R+IQ G AD+++AG
Sbjct: 128 SPFFIPMMIANMA-SAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAG 186

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
             E+ I+ ++I AF  +RAL+T+ N EP +ASRPF   RDGFVMGEG+ +LVLE  +HA 
Sbjct: 187 GTEAAITPMAIGAFAVMRALSTR-NEEPEKASRPFTLSRDGFVMGEGAGVLVLEAYEHAK 245

Query: 130 ARSANIYAEIIGYGM 144
            R A IYAE++G+G 
Sbjct: 246 KRGARIYAELVGFGR 260

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408

 Score = 81.8 bits (203), Expect = 2e-17
 Identities = 22/50 (44%), Positives = 36/50 (72%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
           L+   N++SP+F+  ++ NM++  I++ +GF GP+  V TACATGA A+G
Sbjct: 120 LERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALG 169

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427

 Score =  197 bits (503), Expect = 1e-59
 Identities = 72/151 (47%), Positives = 92/151 (60%), Gaps = 4/151 (2%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GMS D +H+TSP E+G GA LAM  AL DA +    I Y+NAH TSTP GD  E +A+ +
Sbjct: 276 GMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKT 335

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +F   A R++VSSTK   GHLLGAAG +ES ++ILA+ +  VPP +NL++P E       
Sbjct: 336 IFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFV 395

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCI 354
           P    +         L NSFGFGGTN  L  
Sbjct: 396 PHEARQVSG--MEYTLCNSFGFGGTNGSLIF 424

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427

 Score =  188 bits (480), Expect = 2e-56
 Identities = 63/135 (46%), Positives = 86/135 (63%), Gaps = 3/135 (2%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG 69
           SP+FV     NMV AG ++I    +  ++ +      G H IG A R+I  G ADVM+AG
Sbjct: 145 SPFFVPSTIVNMV-AGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAG 203

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
            AE   + L +  F   RAL+T+ N+ P  ASRP+DK RDGFV+G+G+ +LVLEE +HA 
Sbjct: 204 GAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAK 262

Query: 130 ARSANIYAEIIGYGM 144
            R A IYAE++G+GM
Sbjct: 263 KRGAKIYAELVGFGM 277

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427

 Score = 81.8 bits (203), Expect = 2e-17
 Identities = 20/50 (40%), Positives = 32/50 (64%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
           + G   K+SP+FV   + NM AG ++I +G +GP+  ++TA  +G H IG
Sbjct: 137 MNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIG 186

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412

 Score =  196 bits (500), Expect = 2e-59
 Identities = 52/155 (33%), Positives = 69/155 (44%), Gaps = 9/155 (5%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G + DG H+T P         AM  AL DA L    I+Y+NAH TST  GDV E +A   
Sbjct: 265 GCNSDGAHMTQP--TASTMARAMQLALEDAKLDANAIAYVNAHGTSTDRGDVAESQATAR 322

Query: 266 LFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGG--YEC 323
            F  +R+ +SS K   GH LGA G LE+ +TI  +      P +NL +         Y  
Sbjct: 323 TF-GERMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLDY-I 380

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
                    +     + N+F FGG N  L     +
Sbjct: 381 RGEARAIDAE---YVMSNNFAFGGINTSLIFRRVR 412

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412

 Score =  181 bits (461), Expect = 1e-53
 Identities = 53/135 (39%), Positives = 75/135 (55%), Gaps = 4/135 (2%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAG 69
           +        P+   A  +S+  D K + +     C  G  AIG A+  I  G   +M+AG
Sbjct: 135 TSNSYVQMMPHTT-AVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAG 193

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
            AE      ++A F  + A +T+ N+EP    RPFD +RDG V+GEG+A LVLEE +HA 
Sbjct: 194 GAEELSG-PAVAVFDTLYATSTR-NDEPHLTPRPFDAKRDGLVVGEGAATLVLEEYEHAK 251

Query: 130 ARSANIYAEIIGYGM 144
           AR A I+AEI+G+G 
Sbjct: 252 ARGATIHAEIVGFGC 266

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412

 Score = 84.5 bits (210), Expect = 2e-18
 Identities = 14/50 (28%), Positives = 27/50 (54%)

Query: 157 LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
             GS   ++     +++P+ +A  +S+    +G     S+ACA+G+ AIG
Sbjct: 127 ESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIG 176

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424

 Score =  195 bits (497), Expect = 9e-59
 Identities = 55/149 (36%), Positives = 83/149 (55%), Gaps = 6/149 (4%)

Query: 1   MLYRGATTTLSPYFVNPFF-PNMVP---AGAISIDMDSKVQTLCVYCLC-YGGHAIGDAF 55
           +   G    +   +++      +VP      ++  + ++     V   C  G  ++G+A 
Sbjct: 121 LSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAV 180

Query: 56  RLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGE 115
           R I+ G ADVM AGAA++ I+ + +A F  +RA     N++P  ASRPFD  RDGFV+ E
Sbjct: 181 RAIEEGSADVMFAGAADTPITPIVVACFDAIRATTA-RNDDPEHASRPFDGTRDGFVLAE 239

Query: 116 GSAILVLEELDHALARSANIYAEIIGYGM 144
           G+A+ VLE+ D ALAR A I+AEI GY  
Sbjct: 240 GAAMFVLEDYDSALARGARIHAEISGYAT 268

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424

 Score =  194 bits (496), Expect = 1e-58
 Identities = 51/159 (32%), Positives = 68/159 (42%), Gaps = 15/159 (9%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
               + +H+T  + DGR     +  AL ++     DI YINAH + T   D  E  A   
Sbjct: 267 ATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQNDRHETAAYKR 326

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
                A+R  VSS K   GH LGA G+LE A  +LA+  G+VPP  NL          EC
Sbjct: 327 ALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDP-----EC 381

Query: 324 -----PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
                P    E K       L    GFGG  + + + + 
Sbjct: 382 DLDYVPLEARERKLR---SVLTVGSGFGGFQSAMVLRDA 417

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424

 Score = 79.8 bits (198), Expect = 1e-16
 Identities = 12/45 (26%), Positives = 24/45 (53%)

Query: 162 NKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
             LS +    ++P++   +++   G +GP   VST C +G  ++G
Sbjct: 133 AWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVG 177

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406

 Score =  192 bits (491), Expect = 4e-58
 Identities = 58/153 (37%), Positives = 87/153 (56%), Gaps = 8/153 (5%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G + DG  + +P   G GA+  M  A+   +     I Y+N+H TSTP+GDV EL AI  
Sbjct: 261 GATSDGADMVAP--SGEGAVRCMKMAMHGVD---TPIDYLNSHGTSTPVGDVKELAAIRE 315

Query: 266 LFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
           +F  +   +S+TK   GH LGAAG  E+ +++L +  G + P++N+E+  E+A G    T
Sbjct: 316 VFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVT 375

Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
             T+ +       + NSFGFGGTNA L + + K
Sbjct: 376 ETTDRELT---TVMSNSFGFGGTNATLVMRKLK 405

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406

 Score =  180 bits (458), Expect = 2e-53
 Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 3/135 (2%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIAG 69
            PY V     + V +  ++           +   C    H IG+A   IQ G  D++ AG
Sbjct: 130 GPYVVTKAMASGV-SACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAG 188

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
             E    +++   F  + AL+T++N+ P +ASR +D  RDGFV+  G  ++V+EEL+HAL
Sbjct: 189 GGEELCWEMACE-FDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHAL 247

Query: 130 ARSANIYAEIIGYGM 144
           AR A+IYAEI+GYG 
Sbjct: 248 ARGAHIYAEIVGYGA 262

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406

 Score = 85.6 bits (213), Expect = 9e-19
 Identities = 19/70 (27%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 139 IIGYGMIDLSDVLSSNNAL--QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVST 196
           I G G       +   +A+        + PY VT+ + +  +  ++      G N+ +S+
Sbjct: 102 IAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISS 161

Query: 197 ACATGAHAIG 206
           ACAT AH IG
Sbjct: 162 ACATSAHCIG 171

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428

 Score =  189 bits (482), Expect = 1e-56
 Identities = 50/156 (32%), Positives = 75/156 (48%), Gaps = 11/156 (7%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G + DG+ + +P   G GA+  M  AL         I YIN HATSTP GD  E++AI  
Sbjct: 280 GATSDGYDMVAP--SGEGAIRCMKMALSTV---TSKIDYINPHATSTPAGDAPEIEAIRQ 334

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE- 322
           +F        +++TK   GH LGA G  E+ +++L +    +  + ++E+          
Sbjct: 335 IFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPI 394

Query: 323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
               +   + +     L NSFGFGGTNA L    Y+
Sbjct: 395 VRKRIDNVQLN---TVLSNSFGFGGTNATLVFQRYQ 427

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428

 Score =  183 bits (466), Expect = 3e-54
 Identities = 50/135 (37%), Positives = 75/135 (55%), Gaps = 3/135 (2%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCY-GGHAIGDAFRLIQGGHADVMIAG 69
            P+ V     +   +  ++     K     +   C    H IG+A+ +IQ G  D M AG
Sbjct: 149 GPFAVPKAMSSTA-SATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAG 207

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
             E     LS+  F  + A+++++N+ P+ ASR +DK RDGFV+  G+ +LVLE+L+ AL
Sbjct: 208 GCEDLDWTLSVL-FDAMGAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLEDLETAL 266

Query: 130 ARSANIYAEIIGYGM 144
           AR A IY EI+GYG 
Sbjct: 267 ARGAKIYGEIVGYGA 281

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428

 Score = 83.7 bits (208), Expect = 5e-18
 Identities = 16/69 (23%), Positives = 35/69 (50%), Gaps = 1/69 (1%)

Query: 139 IIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTA 197
           I+G G      ++ S +   +    ++ P+ V + + + ++  ++     +G N+ +S+A
Sbjct: 122 IMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSA 181

Query: 198 CATGAHAIG 206
           CAT  H IG
Sbjct: 182 CATSNHCIG 190

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415

 Score =  188 bits (481), Expect = 2e-56
 Identities = 38/168 (22%), Positives = 60/168 (35%), Gaps = 13/168 (7%)

Query: 197 ACATGAHAI-------GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHA 249
           A A G H           + D    +       G   A+  AL DA   P D+  + A  
Sbjct: 250 AEARGRHDAYGELAGCASTFDPAPGS---GRPAGLERAIRLALNDAGTGPEDVDVVFADG 306

Query: 250 TSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNV 309
              P  D  E +AIG +F  + + V+  K   G L    G L+    ++++ EG++ P  
Sbjct: 307 AGVPELDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTA 366

Query: 310 NLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
            +     E G                R AL  + G  G N+   +  +
Sbjct: 367 GVTSVPREYGIDLVLGEPRSTAP---RTALVLARGRWGFNSAAVLRRF 411

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415

 Score =  184 bits (469), Expect = 8e-55
 Identities = 41/136 (30%), Positives = 64/136 (47%), Gaps = 6/136 (4%)

Query: 11  SPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIAG 69
           S Y    +F  +   G ISI    +  +  +     GG  A+G A R I+ G   ++++G
Sbjct: 136 SVYESFAWFYAVN-TGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSG 193

Query: 70  AAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHAL 129
             +S +      +      ++T    +P +A  PFD+R  G+V GEG AILVLE+   A 
Sbjct: 194 GVDSALDPWGWVSQIASGRIST--ATDPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAE 251

Query: 130 ARSA-NIYAEIIGYGM 144
           AR   + Y E+ G   
Sbjct: 252 ARGRHDAYGELAGCAS 267

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415

 Score = 81.4 bits (202), Expect = 3e-17
 Identities = 15/45 (33%), Positives = 22/45 (48%)

Query: 162 NKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIG 206
             +S Y        ++ GQISI HG +GP+  +    A G  A+G
Sbjct: 133 KSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALG 177

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score =  104 bits (261), Expect = 2e-24
 Identities = 45/152 (29%), Positives = 65/152 (42%), Gaps = 16/152 (10%)

Query: 210 DGHH---LTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSL 266
           DG     +T P  D +  L+        A   P  + YI AH T T +GD  EL  I + 
Sbjct: 254 DGSKEQGVTFPSGDVQEQLI--RSLYAPAGPDPESLEYIEAHGTGTKVGDPQELNGIVNA 311

Query: 267 FPAQR---LMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDP-----CEEA 318
             A R   L++ STK   GH   A+G       +L++  G+  PN++   P       + 
Sbjct: 312 LCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPALQD 371

Query: 319 GGYECPTAVTEWKTDGRRVALKNSFGFGGTNA 350
           G  +        +  G  V + NSFGFGG+N 
Sbjct: 372 GRLQVVDRPLPIR--GGNVGI-NSFGFGGSNV 400

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 51.8 bits (124), Expect = 2e-07
 Identities = 19/92 (20%), Positives = 34/92 (36%), Gaps = 10/92 (10%)

Query: 50  AIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRD 109
           A+  A++ I+GG     + G     +   S   F ++  L+           R FD    
Sbjct: 167 ALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKLGMLS------QDGTCRSFDAEGT 220

Query: 110 GFVMGEGSAILVLEELDHALARSANIYAEIIG 141
           G+   E    ++L +   A      +YA I+ 
Sbjct: 221 GYCRAEAVVAVLLTKKSLAR----RVYATILN 248

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965

 Score = 89.2 bits (222), Expect = 1e-19
 Identities = 41/129 (31%), Positives = 56/129 (43%), Gaps = 11/129 (8%)

Query: 230 RALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQR---LMVSSTKGAHGHLLG 286
                A ++P    YI AH T T +GD  EL  I     A R   L++ STK   GH   
Sbjct: 277 SLYQSAGVAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEP 336

Query: 287 AAGNLESAFTILAVHEGLVPPNVNLEDP-----CEEAGGYECPTAVTEWKTDGRRVALKN 341
           A+G    A  +L++  GL  PN++   P         G  +        +  G  V + N
Sbjct: 337 ASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPVR--GGNVGI-N 393

Query: 342 SFGFGGTNA 350
           SFGFGG+N 
Sbjct: 394 SFGFGGSNV 402

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915

 Score = 85.0 bits (211), Expect = 3e-18
 Identities = 42/131 (32%), Positives = 60/131 (45%), Gaps = 10/131 (7%)

Query: 230 RALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLF-----PAQRLMVSSTKGAHGHL 284
           +AL    L PGD+  + AH T T LGD IE  A+   +       + L + S K   GH 
Sbjct: 294 QALESCGLEPGDVDAVEAHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHT 353

Query: 285 LGAAGNLESAFTILAVHEGLVPPNVNLEDPCE----EAGGYECPTAVTEWKTDGR-RVAL 339
             AAG       +LA+  G +P  +++E+P       +GG         W+   R R A 
Sbjct: 354 QAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVALLAGNQPWRRGERTRRAA 413

Query: 340 KNSFGFGGTNA 350
            ++FG  GTNA
Sbjct: 414 VSAFGISGTNA 424

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917

 Score = 85.0 bits (211), Expect = 4e-18
 Identities = 44/131 (33%), Positives = 62/131 (47%), Gaps = 10/131 (7%)

Query: 230 RALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLF-----PAQRLMVSSTKGAHGHL 284
           RAL +A +  GD+ Y+ AH T T LGD IE+ A+ S +     P   L + S K   GH 
Sbjct: 316 RALENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHT 375

Query: 285 LGAAGNLESAFTILAVHEGLVPPNVNLEDPCE----EAGGYECPTAVTEWKTDGR-RVAL 339
             AAG       +LA+  G +P  ++ ++P      + G     +    W    R R A 
Sbjct: 376 QAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGERPRRAG 435

Query: 340 KNSFGFGGTNA 350
            +SFG  GTNA
Sbjct: 436 VSSFGISGTNA 446

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 38/275 (13%), Positives = 75/275 (27%), Gaps = 94/275 (34%)

Query: 118 AILVLEELDHAL-----------------ARSANIYAEIIG------YGMI--------- 145
           +IL  EE+DH +                 ++   +  + +       Y  +         
Sbjct: 44  SILSKEEIDHIIMSKDAVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQR 103

Query: 146 ----DLSDVLSSNNALQGSYNKLSPYFVTRI---------LPNMSAGQISIEHGFQGPNH 192
                    +   + L       + Y V+R+         L  +   +  +  G  G   
Sbjct: 104 QPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLG--- 160

Query: 193 C-----VSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRAL---IDANLSPGDISY 244
                     C +      M      L     +    +L M + L   ID N +      
Sbjct: 161 SGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSR---- 216

Query: 245 INAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGL 304
            + H+++  L        I S+    R ++ S    +  LL           +L      
Sbjct: 217 -SDHSSNIKLR-------IHSIQAELRRLLKSKPYENC-LL-----------VLL----- 251

Query: 305 VPPNVNLEDP-CEEAGGYECPTAVTEWKTDGRRVA 338
                N+++     A    C   +T   T  ++V 
Sbjct: 252 -----NVQNAKAWNAFNLSCKILLT---TRFKQVT 278

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 42.1 bits (98), Expect = 3e-04
 Identities = 45/316 (14%), Positives = 88/316 (27%), Gaps = 108/316 (34%)

Query: 80  IAAF---CRVRALAT-------QFNNEPAQASRPFDKRRDGFVMGEGSAIL--VLEELDH 127
             AF   C++  L T        F +         D         E  ++L   L+    
Sbjct: 259 WNAFNLSCKI--LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQ 316

Query: 128 ALARSA--------NIYAEII--------GYGMIDLSDVLSSNNALQGSYNKLSP----- 166
            L R          +I AE I         +  ++   +      ++ S N L P     
Sbjct: 317 DLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKL---TTIIESSLNVLEPAEYRK 373

Query: 167 -YFVTRILP---NMSAGQISI---EHGFQGP----NHCVSTACA-----TGAHAIGMSGD 210
            +    + P   ++    +S+   +          N     +           +I     
Sbjct: 374 MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISI----- 428

Query: 211 GHHL----TSPREDGRGALLAMTRALIDA----------NLSPGDI-----SYINAHATS 251
              +        E+      A+ R+++D           +L P  +     S+I  H  +
Sbjct: 429 -PSIYLELKVKLEN----EYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKN 483

Query: 252 TPLGDVIELKAIGSLFPA---------QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHE 302
               + +       LF           Q++   ST         A+G++ +    L  ++
Sbjct: 484 IEHPERMT------LFRMVFLDFRFLEQKIRHDST------AWNASGSILNTLQQLKFYK 531

Query: 303 GLVPPNVNLEDPCEEA 318
             +  N    DP  E 
Sbjct: 532 PYICDN----DPKYER 543

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	359
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	100.0
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	100.0
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	100.0
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	100.0
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	100.0
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	100.0
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	100.0
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	100.0
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	100.0
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	100.0
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	100.0
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	100.0
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	100.0
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	100.0
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	100.0
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	100.0
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	100.0
3hhd_A	965	Fatty acid synthase; transferase, multienzyme, meg	100.0
2hg4_A	917	DEBS, 6-deoxyerythronolide B synthase; ketosynthas	100.0
2qo3_A	915	Eryaii erythromycin polyketide synthase modules 3;	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	100.0
2uv9_A	1878	Fatty acid synthase alpha subunits; fungal, dehydr	100.0
2uv8_A	1887	Fatty acid synthase subunit alpha (FAS2); fatty ac	100.0
2pff_A	1688	Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl	100.0
3zen_D	3089	Fatty acid synthase; transferase, mycolic acid bio	100.0
1wl4_A	397	Acetyl-coenzyme A acetyltransferase 2; thiolase fo	99.96
1ulq_A	401	Putative acetyl-COA acetyltransferase; structural	99.96
1wdk_C	390	3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame	99.96
2wu9_A	442	3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o	99.95
2iik_A	418	3-ketoacyl-COA thiolase, peroxisomal; fatty acid m	99.95
2vu1_A	392	Acetyl-COA acetyltransferase; acyltransferase, PHB	99.95
1afw_A	393	3-ketoacetyl-COA thiolase; fatty acid metabolism;	99.95
2ib8_A	395	Acetyl-COA acetyltransferase; thiolase fold, potas	99.95
4dd5_A	396	Acetyl-COA acetyltransferase; structural genomics,	99.94
3ss6_A	394	Acetyl-COA acetyltransferase; structural genomics,	99.94
3goa_A	387	3-ketoacyl-COA thiolase; metabolism, fatty acid, p	99.94
4e1l_A	395	Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich,	99.93
3svk_A	407	Acetyl-COA acetyltransferase; ssgcid, NIH, niaid,	99.93
1ub7_A	322	3-oxoacyl-[acyl-carrier protein] synthase; fatty a	99.88
4egv_A	520	Acetyl-COA acetyltransferase; NEW SUB-family, thio	99.88
2ebd_A	309	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.85
1hnj_A	317	Beta-ketoacyl-acyl carrier protein synthase III; F	99.84
1zow_A	313	3-oxoacyl-[acyl-carrier-protein] synthase III; FAB	99.82
1mzj_A	339	Beta-ketoacylsynthase III; beta-ketosynthase, arom	99.78
2x3e_A	331	3-oxoacyl-[acyl-carrier-protein] synthase 3; HED,	99.76
1u6e_A	335	3-oxoacyl-[acyl-carrier-protein] synthase III; tra	99.74
1u0m_A	382	Putative polyketide synthase; type III polyketide	99.69
1ted_A	393	PKS18; thiolase fold, substrate binding tunnel, tr	99.6
3s21_A	345	3-oxoacyl-[ACP] synthase III; non-decarboxylative	99.58
2h84_A	374	Steely1; thiolase-fold, type III polyketide syntha	99.56
4dfe_A	333	3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci	99.54
3tsy_A	979	Fusion protein 4-coumarate--COA ligase 1, resvera	99.53
1xpm_A	396	3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s	99.45
3il3_A	323	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.44
2d3m_A	406	Pentaketide chromone synthase; chalcone synthase,	99.37
3gwa_A	365	3-oxoacyl-(acyl-carrier-protein) synthase III; str	99.32
3h78_A	359	PQS biosynthetic enzyme; PQSD, anthranilic acid, a	99.3
3led_A	392	3-oxoacyl-acyl carrier protein synthase III; struc	99.28
4efi_A	354	3-oxoacyl-(acyl-carrier protein) synthase; structu	99.26
1xes_A	413	Dihydropinosylvin synthase; native structure, tran	99.23
3il6_A	321	3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH,	99.19
3a5r_A	387	Benzalacetone synthase; chalcone synthase, type II	99.18
3s3l_A	357	CERJ; acyltransferase, FABH homologue, KS III homo	99.17
2p0u_A	413	Stilbenecarboxylate synthase 2; polyketide synthas	99.15
1i88_A	389	CHS2, chalcone synthase 2; polyketide synthase, tr	99.13
3awk_A	402	Chalcone synthase-like polyketide synthase; type I	99.09
1ee0_A	402	2-pyrone synthase; polyketide synthase, thiolase f	99.09
3ov2_A	393	Curcumin synthase; type III polyketide synthase, t	99.08
4ewp_A	350	3-oxoacyl-[acyl-carrier-protein] synthase 3; trans	99.05
3oit_A	387	OS07G0271500 protein; type III polyketide synthase	99.05
2f82_A	450	HMG-COA synthase; HMGS1, transferase; 2.10A {Brass	99.01
3v4n_A	388	HMG-COA synthase; hydroxymethylglutaryl-COA syntha	98.92
3euo_A	379	Type III pentaketide synthase; alpha helix, acyltr	98.9
3lma_A	347	Stage V sporulation protein AD (spovad); NESG, str	98.84
3e1h_A	465	PKSIIINC, putative uncharacterized protein; resorc	98.83
3sqz_A	425	Putative hydroxymethylglutaryl-COA synthase; thiol	98.82
3v7i_A	413	Putative polyketide synthase; type III polyketide	98.76
2p8u_A	478	Hydroxymethylglutaryl-COA synthase, cytoplasmic; h	98.48
2v4w_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	98.35
2wya_A	460	Hydroxymethylglutaryl-COA synthase, mitochondrial;	97.53
4ewg_A	412	Beta-ketoacyl synthase; ssgcid, structural genomic	94.6
2gp6_A	434	3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol	94.25
3o04_A	413	LMO2201 protein, beta-keto-acyl carrier protein sy	93.77
3mqd_A	428	Beta-ketoacyl synthase; ssgcid, ALS collaborative	93.71
2wge_A	416	3-oxoacyl-[acyl-carrier-protein] synthase 1; beta	93.45
3ho9_A	427	3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF,	93.02
2ix4_A	431	3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke	92.94
1ox0_A	430	Beta ketoacyl-acyl carrier protein synthase; trans	92.85
3kzu_A	428	3-oxoacyl-(acyl-carrier-protein) synthase II; seat	92.79
2iwz_A	438	3-oxoacyl-[acyl-carrier-protein] synthase; mitocho	92.78
2vba_A	406	3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop	92.76
1e5m_A	416	KAS II, beta ketoacyl acyl carrier protein synthas	92.64
1j3n_A	408	3-oxoacyl-(acyl-carrier protein) synthase II; cond	92.63
4ddo_A	451	3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci	92.31
1tqy_B	415	Actinorhodin polyketide putative beta-ketoacyl SY;	92.29
2gqd_A	437	3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli	91.88
1tqy_A	424	Beta-ketoacyl synthase/acyl transferase; alpha-bet	87.79
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	85.97

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=100.00  E-value=1.4e-53  Score=416.93  Aligned_cols=284  Identities=56%  Similarity=0.874  Sum_probs=264.3

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++..++|+ ++++|++.||++||+++|+++| |++.||..|+++|++|+||++||||+|.++++..+..+..+
T Consensus       152 ~~~~p~~~~~~~~~~-~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~  230 (438)
T 2iwz_A          152 NKVSPFFVPKILVNM-AAGQVSIRYKLKGPNHAVSTACTTGAHAVGDSFRFIAHGDADVMVAGGTDSCISPLSLAGFSRA  230 (438)
T ss_dssp             GGSCTTHHHHTCTTH-HHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccChhhhhhhhhhH-HHHHHHHHhCCCCceeeecCchhHHHHHHHHHHHHHHcCCCCEEEEEeeehhcCHHHHHHHHhc
Confidence            578999999999999 9999999999999999999999 99999999999999999999999999998889888889999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.+++.  .+|++.|+|||.+++|+++|||+++++|++.+++.++|++|+++|+|++                       
T Consensus       231 ~~ls~~--~~p~~~~~pfd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~-----------------------  285 (438)
T 2iwz_A          231 RALSTN--SDPKLACRPFHPKRDGFVMGEGAAVLVLEEYEHAVQRRARIYAEVLGYG-----------------------  285 (438)
T ss_dssp             TCBCCC--SCTTTSCCTTCTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             CCcCCC--CCCCcccccCCCCCCCEEeeceEEEEEeccHHHHHhCCCceEEEEecce-----------------------
Confidence            988752  4578899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.....|.+.+.+..++++++|++++++|+||||+|
T Consensus       286 ----------------------------------------~~~d~~~~t~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve  325 (438)
T 2iwz_A          286 ----------------------------------------LSGDAGHITAPDPEGEGALRCMAAALKDAGVQPEEISYIN  325 (438)
T ss_dssp             ----------------------------------------EEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ----------------------------------------ecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence                                                    4455556677777888999999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  324 (359)
                      .|+++|..+|+.|.++|..+|+  ..+++|++.|+++||+++|||++++++++++|+++.|||++|+++|+|.+++.+++
T Consensus       326 ~HgtgT~~gD~~E~~al~~~fg~~~~~~~v~s~K~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~  405 (438)
T 2iwz_A          326 AHATSTPLGDAAENKAIKHLFKDHAYALAVSSTKGATGHLLGAAGAVEAAFTTLACYYQKLPPTLNLDCSEPEFDLNYVP  405 (438)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECCHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSCCCTTCCSBCCB
T ss_pred             ecCCCCcccCHHHHHHHHHHHhccCCCcceecchhhhcCCHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCccccC
Confidence            9999999999999999999997  34799999999999999999999999999999999999999999999999998999


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      .+.++|+.++.|++++|||||||+|+|+||+++
T Consensus       406 ~~~~~~~~~~~~~a~~~sfGfGG~na~~vl~~~  438 (438)
T 2iwz_A          406 LKAQEWKTEKRFIGLTNSFGFGGTNATLCIAGL  438 (438)
T ss_dssp             SSCEECCCSSSCEEEEEEEETTTEEEEEEEECC
T ss_pred             CCcccCCCCCccEEEEecCcCCCeeEEEEEeeC
Confidence            888888866689999999999999999999985

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=100.00  E-value=1.1e-53  Score=414.92  Aligned_cols=282  Identities=37%  Similarity=0.530  Sum_probs=261.2

Q ss_pred             CCCCCCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH
Q psy5293           4 RGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA   82 (359)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~   82 (359)
                      ++. +.++|+.++..++|. ++++|++.||++||+++|+++| |++.||..|+++|++|+||++||||+|. +++.....
T Consensus       129 ~~~-~~~~~~~~~~~~~~~-~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~-~s~~~~~~  205 (412)
T 4ewg_A          129 GSM-TDVTSNSYVQMMPHT-TAVNVSLFWDLKGRIVPTSSACASGSQAIGYAYENIAMGKQTLMLAGGAEE-LSGPAVAV  205 (412)
T ss_dssp             CCC-TTCCTTHHHHHSTTH-HHHHHHHHTTCCSCEEECCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHH
T ss_pred             cCc-ccCChhhhhhhcccH-HHHHHHHHhCCCCCcccccchhHHHHHHHHHHHHHHHcCCCCEEEEecccc-CCHHHHHH
Confidence            344 779999999999999 9999999999999999999999 9999999999999999999999999999 88888888


Q ss_pred             HHhhccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhccccc
Q psy5293          83 FCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYN  162 (359)
Q Consensus        83 ~~~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~  162 (359)
                      +...+.++.. .++|++.|+|||.+++|+++|||+++++|++.+++.++|++|+++|.|++                   
T Consensus       206 ~~~~~~l~~~-~~~p~~~~rpfd~~~~G~~~geGAaavvL~~~~~A~~~g~~i~a~i~g~~-------------------  265 (412)
T 4ewg_A          206 FDTLYATSTR-NDEPHLTPRPFDAKRDGLVVGEGAATLVLEEYEHAKARGATIHAEIVGFG-------------------  265 (412)
T ss_dssp             HHTTTCBCCC-TTCGGGCCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-------------------
T ss_pred             HHHhhccccC-CCCCCCCCCCCCCCCCCCceECeEEEEEEccHHHHhhCCCcEEEEEEEEE-------------------
Confidence            9999988854 55678999999999999999999999999999999999999999999987                   


Q ss_pred             ccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCc
Q psy5293         163 KLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDI  242 (359)
Q Consensus       163 ~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI  242 (359)
                                                                  ...|+.+...|  .+.++.++++++|++++++|+||
T Consensus       266 --------------------------------------------~~~dg~~~~~p--~~~~~~~ai~~Al~~Agl~~~dI  299 (412)
T 4ewg_A          266 --------------------------------------------CNSDGAHMTQP--TASTMARAMQLALEDAKLDANAI  299 (412)
T ss_dssp             --------------------------------------------EEECSSCSSSC--CHHHHHHHHHHHHHHTTCCGGGE
T ss_pred             --------------------------------------------EcCCCCCCCCC--CHHHHHHHHHHHHHHcCCCHHHC
Confidence                                                        55556666666  56888999999999999999999


Q ss_pred             cEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccC-CCC
Q psy5293         243 SYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEA-GGY  321 (359)
Q Consensus       243 ~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~-~~~  321 (359)
                      ||+|.|+++|..+|+.|.+++..+|+. .++|++.|+++||++||||++++++++++|++++|||++|+++|+|++ +..
T Consensus       300 d~ve~Hgtgt~~~D~~E~~al~~~~~~-~~~v~s~K~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~  378 (412)
T 4ewg_A          300 AYVNAHGTSTDRGDVAESQATARTFGE-RMPISSLKSYVGHTLGACGALEAWWTIEMMKRNWYAPTLNLTEVDPACAPLD  378 (412)
T ss_dssp             EEEECCCCCCHHHHHHHHHHHHHHHCT-TCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTSCCCE
T ss_pred             CEEEccCCCCccccHHHHHHHHHHcCC-CCeeeCccccccccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCcccccc
Confidence            999999999999999999999999974 599999999999999999999999999999999999999999999999 777


Q ss_pred             CCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      +++.+.++++   .|++++|||||||+|+|+||++|+
T Consensus       379 ~v~~~~~~~~---~~~~~~~sfgfGG~na~~vl~~~~  412 (412)
T 4ewg_A          379 YIRGEARAID---AEYVMSNNFAFGGINTSLIFRRVR  412 (412)
T ss_dssp             ECCSSCEECC---CSEEEEEEEEGGGEEEEEEEECCC
T ss_pred             cccCcccCCC---CCEEEEeeecCCcceEEEEEeeCC
Confidence            7887777766   899999999999999999999984

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=6.8e-54  Score=416.91  Aligned_cols=283  Identities=48%  Similarity=0.772  Sum_probs=262.7

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++.+++|. ++.+|++.||++||+++|+++| |++.||..|+++|++|+||++||||+|.++++..+..+..+
T Consensus       131 ~~~~p~~~~~~~~~~-~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~  209 (416)
T 1e5m_A          131 SRCSPFMIPMMIANM-ASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASA  209 (416)
T ss_dssp             GGSCTTHHHHHSTTH-HHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             ccCChhHhhhhhhHH-HHHHHHHHhCCCCceeCccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHHc
Confidence            568899999999999 9999999999999999999999 99999999999999999999999999998899888889999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.. +++|++.|+|||.+++|+++|||+++++|++.+++.++|++|+++|.|++                       
T Consensus       210 ~~ls~~-~~~p~~~~rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~-----------------------  265 (416)
T 1e5m_A          210 RALSFR-NDDPLHASRPFDKDRDGFVMGEGSGILILEELESALARGAKIYGEMVGYA-----------------------  265 (416)
T ss_dssp             TCBCCC-TTCGGGTCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             CCccCC-CCCCccccccCccCCCCceeeeeEEEEEECcHHHHHHCCCeEEEEEEEEE-----------------------
Confidence            888753 44578899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.+...|.+.+.++.++++++|++++++|+||||+|
T Consensus       266 ----------------------------------------~~~d~~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve  305 (416)
T 1e5m_A          266 ----------------------------------------MTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYIN  305 (416)
T ss_dssp             ----------------------------------------EEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ----------------------------------------EccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhHCCEEE
Confidence                                                    4455556677777888999999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  324 (359)
                      .|+++|+.+|+.|.++|..+|+  ..+++|++.|+++||+++|||++++++++++|+++.|||++|+++|+|.++..+++
T Consensus       306 ~Hgtgt~~~D~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~  385 (416)
T 1e5m_A          306 AHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVP  385 (416)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCB
T ss_pred             EECCCCcCcCHHHHHHHHHHHcccCCCCeeeCcchhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccC
Confidence            9999999999999999999997  34689999999999999999999999999999999999999999999999988888


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .+.++|+   .|++++|||||||+|+|+||++|+
T Consensus       386 ~~~~~~~---~~~a~~~sfGfGG~n~~~vl~~~~  416 (416)
T 1e5m_A          386 GQSRALI---VDVALSNSFGFGGHNVTLAFKKYQ  416 (416)
T ss_dssp             SSCEECC---CSEEEEEEEETTTEEEEEEEECCC
T ss_pred             CccccCC---CCEEEEccccCCCeeEEEEEEeCC
Confidence            8887776   899999999999999999999974

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=100.00  E-value=3.5e-53  Score=411.60  Aligned_cols=284  Identities=44%  Similarity=0.750  Sum_probs=265.2

Q ss_pred             CCCCCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHH
Q psy5293           5 GATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAF   83 (359)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~   83 (359)
                      +. ..++|+.++.+++|+ ++++|++.||++||+++|+++| |++.||..|+++|++|++|++||||+|.++++.....+
T Consensus       126 ~~-~~~~p~~~~~~~~~~-~a~~ia~~lgl~gp~~~v~~aCss~~~Al~~A~~~I~~G~~d~~lvgG~e~~~~~~~~~~~  203 (413)
T 3o04_A          126 GH-RRVSPFFVPMMIPDM-GSGQVSIRFGAKGINSTTVTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGF  203 (413)
T ss_dssp             CT-TTSCTTHHHHHSTTH-HHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHH
T ss_pred             CC-CccCchhhhcccccH-HHHHHHHHhCCCCcceeecchhHHHHHHHHHHHHHHHcCCCCEEEEeEEcccCCHHHHHHH
Confidence            44 778999999999999 9999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             HhhccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccc
Q psy5293          84 CRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNK  163 (359)
Q Consensus        84 ~~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~  163 (359)
                      ...+.++.  ..+|++.++|||.+++|++++||+++++|++.+++.+++++++++|.|++                    
T Consensus       204 ~~~~~ls~--~~~p~~~~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~--------------------  261 (413)
T 3o04_A          204 TANKALSL--NPDPETACRPFDKDRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYG--------------------  261 (413)
T ss_dssp             HHTTCBCC--CCCTTTSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEE--------------------
T ss_pred             HhcccccC--CCCCCCCcCCCcCCCCCceEeccEEEEEEeeHHHHHhCCCeEEEEEEEEE--------------------
Confidence            99999885  45578899999999999999999999999999999999999999999987                    


Q ss_pred             cCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCcc
Q psy5293         164 LSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDIS  243 (359)
Q Consensus       164 ~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~  243 (359)
                                                                 ...|+.+...|.+.+.++.++++++|+++|++|+|||
T Consensus       262 -------------------------------------------~~~dg~~~~~~~~~~~~~~~a~~~al~~agl~~~dId  298 (413)
T 3o04_A          262 -------------------------------------------ATGDAYHITAPAPNGEGAARAMKMAIDDAGLTPDKVD  298 (413)
T ss_dssp             -------------------------------------------EEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCC
T ss_pred             -------------------------------------------EcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcC
Confidence                                                       5555666777888888999999999999999999999


Q ss_pred             EEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCC
Q psy5293         244 YINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY  321 (359)
Q Consensus       244 ~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~  321 (359)
                      |+|.|+|||..+|+.|.++|..+|+  ..+++|++.|.++||+++|||++++++++++|++++|||++|+++|+|.+++.
T Consensus       299 ~ve~HgtgT~~~d~~e~~al~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~~~~~~~~l~~~~ipp~~~~~~~~~~~~~~  378 (413)
T 3o04_A          299 YINAHGTSTPYNDEYETQAIKTVFGEHAKKLAISSTKSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLD  378 (413)
T ss_dssp             EEECCCCCCHHHHHHHHHHHHHHHGGGTTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSBCSSCCSC
T ss_pred             EEEEeCCcCcccCHHHHHHHHHHhcccCCCCceecccccccccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCcc
Confidence            9999999999999999999999997  35799999999999999999999999999999999999999999999999988


Q ss_pred             CCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      +++.+.+.+.   .|++++|+|||||+|+|+||++|+
T Consensus       379 ~~~~~~~~~~---~~~~~~~sfgfgG~na~~vl~~~~  412 (413)
T 3o04_A          379 YVPNEAREAN---VNVVISNSFGFGGHNATLVFKRIE  412 (413)
T ss_dssp             CCBSSCEECC---CCEEEEEEEETTTEEEEEEEECCC
T ss_pred             cCCCcccCCC---CCEEEEeCccCCceEEEEEEEeCC
Confidence            8887776554   899999999999999999999986

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=100.00  E-value=3e-53  Score=414.42  Aligned_cols=282  Identities=45%  Similarity=0.761  Sum_probs=262.9

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++.+++|. ++++|++.||++||+++|+++| |++.||..|+++|++|+||++||||+|.++++..+..+..+
T Consensus       152 ~~~~p~~~~~~~~~~-~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~  230 (437)
T 2gqd_A          152 RRVSPFFVPMLIPDM-ATGQVSIDLGAKGPNGATVTACATGTNSIGEAFKIVQRGDADAMITGGTEAPITHMAIAGFSAS  230 (437)
T ss_dssp             GGSCTTHHHHHSTTH-HHHHHHHHHTCCSSEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             ccCChHHhhhcchhH-HHHHHHHHhCCCCceEEecCCccHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhc
Confidence            568899999999999 9999999999999999999999 99999999999999999999999999998899888889999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.  +++|++.|+|||.+++|+++|||+++++|++.+++.++|++++++|+|++                       
T Consensus       231 ~~ls~--~~~p~~~~~pfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~-----------------------  285 (437)
T 2gqd_A          231 RALST--NDDIETACRPFQEGRDGFVMGEGAGILVIESLESAQARGANIYAEIVGYG-----------------------  285 (437)
T ss_dssp             TCBCC--CCCTTTSSCTTCTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEE-----------------------
T ss_pred             cCccC--CCCCccccCCCCCCCCCceeeceEEEEEECcHHHHHhCCCceEEEEEEEE-----------------------
Confidence            99885  44588899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.....|.+.+.+..++++++|++++++|+||||+|
T Consensus       286 ----------------------------------------~~~dg~~~~~p~~~~~~~~~ai~~Al~~Agl~p~dId~ve  325 (437)
T 2gqd_A          286 ----------------------------------------TTGDAYHITAPAPEGEGGSRAMQAAMDDAGIEPKDVQYLN  325 (437)
T ss_dssp             ----------------------------------------EEECCSCSSSCCGGGHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ----------------------------------------ecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHhhCCEEE
Confidence                                                    4455556667777888999999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  324 (359)
                      .|+++|..+|+.|++++..+|+  ..+++|++.|+++||+++|+|++++++++++|+++.|||++|+++|+|.++..+++
T Consensus       326 ~HgtgT~~~D~~E~~al~~~fg~~~~~~~v~s~k~~~GH~~gAaG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~  405 (437)
T 2gqd_A          326 AHGTSTPVGDLNEVKAIKNTFGEAAKHLKVSSTKSMTGHLLGATGGIEAIFSALSIKDSKVAPTIHAVTPDPECDLDIVP  405 (437)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHGGGGTSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCCSCCSSCCSBCCB
T ss_pred             EECCCCcCcCHHHHHHHHHHHhccCCCceeecchhhhcCChhhhhHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC
Confidence            9999999999999999999997  35799999999999999999999999999999999999999999999999988888


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .+.++|+   .|++++|+|||||+|+|+||++|+
T Consensus       406 ~~~~~~~---~~~a~~~sfGfGG~na~~vl~~~~  436 (437)
T 2gqd_A          406 NEAQDLD---ITYAMSNSLGFGGHNAVLVFKKFE  436 (437)
T ss_dssp             SSCEECC---CSEEEEEEECGGGEEEEEEEECCC
T ss_pred             CccccCC---CCEEEEccCcCCCeeEEEEEEecc
Confidence            8777776   899999999999999999999985

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=100.00  E-value=8.1e-53  Score=410.48  Aligned_cols=279  Identities=35%  Similarity=0.590  Sum_probs=252.3

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++..++|+ ++++|++.||++||+++|+++| ||+.||.+|+++|++|+||++||||+|. .++.....+..+
T Consensus       146 ~~~~~~~~~~~~~~~-~a~~ia~~lgl~gp~~tv~~aCsSgl~Ai~~A~~~I~~G~~d~alvgG~e~-~s~~~~~~~~~~  223 (428)
T 3mqd_A          146 KRVGPFAVPKAMSST-ASATLATFFKIKGINYSISSACATSNHCIGNAYEMIQYGKQDRMFAGGCED-LDWTLSVLFDAM  223 (428)
T ss_dssp             GGGCTTCHHHHSTTH-HHHHHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHT
T ss_pred             cccCchhhccccccH-HHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHcCCCCEEEEEeecc-cchHHHHHHHHh
Confidence            678999999999999 9999999999999999999999 9999999999999999999999999999 455556668899


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++....++|++.|+|||.+++|++++||+++++|++.+++.++|++|+++|+|++                       
T Consensus       224 ~~ls~~~~~~p~~~~rpfd~~~~G~v~gEGAaavvL~~~~~A~~~g~~i~a~I~g~~-----------------------  280 (428)
T 3mqd_A          224 GAMSSKYNDTPSTASRAYDKNRDGFVIAGGAGVLVLEDLETALARGAKIYGEIVGYG-----------------------  280 (428)
T ss_dssp             TCBCCTTTTSGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             hhhcccccCCcccccCcccCCCCCcccccceEEEEEccHHHHHhCCCcEEEEEEEEE-----------------------
Confidence            998876566788999999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.+.+.|  ++.++.++++++|+  +++ +||||+|
T Consensus       281 ----------------------------------------~~~dg~~~~~P--~~~~~~~ai~~Al~--gl~-~dId~ve  315 (428)
T 3mqd_A          281 ----------------------------------------ATSDGYDMVAP--SGEGAIRCMKMALS--TVT-SKIDYIN  315 (428)
T ss_dssp             ----------------------------------------EEECCSCSSSC--CSHHHHHHHHHHHT--TCC-SCCCEEE
T ss_pred             ----------------------------------------EcCCCCCCCCC--CHHHHHHHHHHHHh--CCc-cccCEEE
Confidence                                                    55556666666  66888999999999  999 9999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  324 (359)
                      .|+|||+.+|+.|.+++..+|+  .+.++|++.|+++||++||||++++++++++|++++|||++|+++|+|.+....++
T Consensus       316 ~HgtgT~~~D~~E~~al~~~~~~~~~~~~v~s~K~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~~~  395 (428)
T 3mqd_A          316 PHATSTPAGDAPEIEAIRQIFGAGDVCPPIAATKSLTGHSLGATGVQEAIYSLLMMQNNFICESAHIEELDPAFADMPIV  395 (428)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHCSGGGSCCBCCTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSCBC
T ss_pred             EeCCCCCCcCHHHHHHHHHHhcccCCCceeecchhhhcccHHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCcccccCCcc
Confidence            9999999999999999999998  55689999999999999999999999999999999999999999999998633333


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .+..++  ...|++++|||||||+|+|+||++|+
T Consensus       396 ~~~~~~--~~~~~~~~~sfGfGG~Na~~vl~~~~  427 (428)
T 3mqd_A          396 RKRIDN--VQLNTVLSNSFGFGGTNATLVFQRYQ  427 (428)
T ss_dssp             SSCEES--CCCCEEEEEEEETTTEEEEEEEECCC
T ss_pred             CCcccc--CCCCEEEEecCcCCcceEEEEEeecC
Confidence            333332  24799999999999999999999986

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=100.00  E-value=9.6e-53  Score=410.33  Aligned_cols=284  Identities=52%  Similarity=0.837  Sum_probs=263.7

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++.+++|+ ++++|++.||++||+++|+++| |++.||..|+++|++|++|++||||+|.++++..+..+..+
T Consensus       143 ~~~~p~~~~~~~~~~-~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~  221 (431)
T 2ix4_A          143 RRLSPFFIPKILVNM-ASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRS  221 (431)
T ss_dssp             GGCCTTHHHHHCTTH-HHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             ccCChhhhhcchhHH-HHHHHHHHHCCCCceeCccChhHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhc
Confidence            678999999999999 9999999999999999999999 99999999999999999999999999999999888888999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++..++.+|++.++|||.+++|++++||+++++|++.+.+.+++++++++|.+++                       
T Consensus       222 ~~ls~~~~~~~~~~~~pfd~~~~g~~~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~-----------------------  278 (431)
T 2ix4_A          222 RALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKIYAELCGYG-----------------------  278 (431)
T ss_dssp             TCBCCTTTTCGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             cccCccccCCcccccccCCCCCCCceeecceEEEEEccHHHHHhCCCceEEEEeeee-----------------------
Confidence            998865566788899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.....|.+.+.+..++++++|+++|++|+||||+|
T Consensus       279 ----------------------------------------~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve  318 (431)
T 2ix4_A          279 ----------------------------------------MSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVN  318 (431)
T ss_dssp             ----------------------------------------EEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ----------------------------------------ecCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence                                                    4455556667777778999999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC----CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP----AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE  322 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~----~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~  322 (359)
                      .|+|||..+|+.|.+++..+|+    ..+++|++.|+++||+++|||++++++++++|+++.|||++|+++|+|.++..+
T Consensus       319 ~HgtgT~~~D~~E~~al~~~~~~~~~~~~~~v~s~k~~~GH~~gAsG~~~li~~~l~l~~~~ipp~~~~~~~~p~~~~~~  398 (431)
T 2ix4_A          319 AHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRF  398 (431)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSS
T ss_pred             EeCCcCcccCHHHHHHHHHHHcccccCCCceeecchhhhcccHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccc
Confidence            9999999999999999999997    257999999999999999999999999999999999999999999999999888


Q ss_pred             CCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      ++.+.++|+  +.|++++|||||||+|+|+||++|
T Consensus       399 v~~~~~~~~--~~~~a~~~sfGfGG~na~~il~~~  431 (431)
T 2ix4_A          399 MPLTTSKKM--LVRTAMSNSFGFGGTNASLLFASI  431 (431)
T ss_dssp             CCCSSCEEC--CCSEEEEEEEETTTEEEEEEEECC
T ss_pred             CCccccccC--CCCEEEEecccCCCeeEEEEEeeC
Confidence            888887773  379999999999999999999986

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=100.00  E-value=3e-53  Score=413.55  Aligned_cols=283  Identities=47%  Similarity=0.754  Sum_probs=263.9

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++.++.|. ++++|++.||++||+++|+++| |++.||..|+++|++|+||++||||+|.++++..+..+...
T Consensus       142 ~~~~~~~~~~~~~~~-~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~  220 (427)
T 3ho9_A          142 RKISPFFVPSTIVNM-VAGHLTIMYGLRGPSISIATAATSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAA  220 (427)
T ss_dssp             GGSCTTHHHHHSTTH-HHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccCcceeccccchH-HHHHHHHHhCCCCCeecccchhHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhc
Confidence            678999999999999 9999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.. ++.|++.++|||.+++|++++||+++++|++.+++.+++++++++|.|++                       
T Consensus       221 ~~ls~~-~~~~~~~~~pfd~~~~G~v~geGAaavvL~~~~~A~~~g~~i~a~i~g~~-----------------------  276 (427)
T 3ho9_A          221 RALSTR-NDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGAKIYAELVGFG-----------------------  276 (427)
T ss_dssp             TCBCCC-TTCHHHHCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             cCcccC-CCCCCcccCCccCCCCCceeeeeEEEEEEccHHHHHHCCCcEEEEEEEEe-----------------------
Confidence            998853 34466789999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.+...|.+.+.+..++++++|+++|++|+||||+|
T Consensus       277 ----------------------------------------~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve  316 (427)
T 3ho9_A          277 ----------------------------------------MSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVN  316 (427)
T ss_dssp             ----------------------------------------EEECCSBTTBCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ----------------------------------------ecCCCCCcCCCCCCHHHHHHHHHHHHHHcCCCHHHccEEE
Confidence                                                    5555666677777889999999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  324 (359)
                      .|+|||+.+|+.|..++.++|+  ..++++++.|.++||+++|||++++++++++|++++|||++|+++|+|.+++.+++
T Consensus       317 ~HgtgT~~~d~~e~~a~~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~  396 (427)
T 3ho9_A          317 AHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVP  396 (427)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHGGGGGTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCCBCCB
T ss_pred             ecCCcCCCcCHHHHHHHHHHhcccCCCeEEecchHhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCccccc
Confidence            9999999999999999999997  35799999999999999999999999999999999999999999999999998898


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      .+.++|+  +.|++++|+|||||+|+|+||++|
T Consensus       397 ~~~~~~~--~~~~a~~~sfGfgG~na~~vl~~~  427 (427)
T 3ho9_A          397 HEARQVS--GMEYTLCNSFGFGGTNGSLIFKKI  427 (427)
T ss_dssp             SSCEECS--SCCEEEEEEEETTTEEEEEEEECC
T ss_pred             cccccCC--CCCEEEEeCccCCceeEEEEEEeC
Confidence            8888874  389999999999999999999986

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=100.00  E-value=1.6e-52  Score=408.28  Aligned_cols=283  Identities=49%  Similarity=0.791  Sum_probs=265.5

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++..+.|+ ++++|++.||++||+++|+++| |++.||.+|+++|++|+||++||||+|.++++..+..+...
T Consensus       142 ~~~~~~~~~~~~~~~-~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~  220 (428)
T 3kzu_A          142 RRISPFFIPGRLINL-ASGHVSIKHKLRGPNHSVVTACATGTHAIGDAARLIAFGDADVMVAGGTESPVSRISLAGFAAC  220 (428)
T ss_dssp             GGSCTTTTTTTCTTH-HHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccCchhcccchhhh-HHHHHHHHcCCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeeecCcCCHHHHHHHHHc
Confidence            678999999999999 9999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++....++|...++|||.+++|++++||+++++|++.+.+.+++++|+++|.+++                       
T Consensus       221 ~~ls~~~~~~~~~~~~pfd~~~~G~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~-----------------------  277 (428)
T 3kzu_A          221 KALSTERNDDPTAASRPYDEDRDGFVMGEGAGIVVLEELEHALARGAKIYAEVIGYG-----------------------  277 (428)
T ss_dssp             TCBCCSCTTSGGGTCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEE-----------------------
T ss_pred             cccccCccCCcccccCCcccCCCceeecCceEEEEEccHHHHHhCCCceEEEEEEEE-----------------------
Confidence            999876666778899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...++.+...|.+.+.+..++++++|+++|++|+||||+|
T Consensus       278 ----------------------------------------~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve  317 (428)
T 3kzu_A          278 ----------------------------------------MSGDAFHITAPTESGEGAQRCMVAALKRAGIVPDEIDYIN  317 (428)
T ss_dssp             ----------------------------------------EEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ----------------------------------------EccCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHeeEEE
Confidence                                                    5555666777888888999999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  324 (359)
                      .|+++| .+|+.|++++.+.|+  ..++++++.|.++||++||+|++++++++++|++++|||++|+++|+|.+++.+++
T Consensus       318 ~HgtgT-~~d~~e~~al~~~~g~~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~  396 (428)
T 3kzu_A          318 AHGTST-MADTIELGAVERVVGEAAAKISMSSTKSSIGHLLGAAGAAEAVFSTLAIRDNIAPATLNLDNPAAQTRIDLVP  396 (428)
T ss_dssp             CCCCSS-TTHHHHHHHHHHHHGGGGGGCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBTTCSSBSSCCSSBCCB
T ss_pred             ecCCcc-hhhHHHHHHHHHHhccCCCceeeCCchhhhCCCchhhHHHHHHHHHHHhccCccCCCCCCCCCCCCCCcccCC
Confidence            999999 899999999999987  34789999999999999999999999999999999999999999999999988888


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .+.++++   .|++++|+|||||+|+|+||++|+
T Consensus       397 ~~~~~~~---~~~a~~~sfGfgG~na~~vl~~~~  427 (428)
T 3kzu_A          397 HKPRERK---IDVALSNSFGFGGTNASLVLRRYT  427 (428)
T ss_dssp             SSCEECC---CSEEEEEEEETTTEEEEEEEECCC
T ss_pred             CCCcCCC---CCEEEEeCcccChhhEEEEEeecC
Confidence            8777766   899999999999999999999986

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=1.1e-52  Score=408.36  Aligned_cols=278  Identities=27%  Similarity=0.362  Sum_probs=258.9

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.+..++.+. ++++|++.||++||+++|+++| |++.||..|+++|++| +|++||||+|.++++..+..+..+
T Consensus       133 ~~~~~~~~~~~~~~~-~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G-~d~~LvgG~e~~~~~~~~~~~~~~  210 (415)
T 1tqy_B          133 KSVSVYESFAWFYAV-NTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIAS  210 (415)
T ss_dssp             GGSCTTHHHHSSTTH-HHHHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTT
T ss_pred             ccCChhhhhcccchH-HHHHHHHHhCCCCceEeecCCccHHHHHHHHHHHHHHcC-CCEEEEeeecCcCCHHHHHHHHhc
Confidence            678999999999999 9999999999999999999999 9999999999999999 999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCC-cEEEEEeecccccchhhhhhhhhhcccccccC
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSA-NIYAEIIGYGMIDLSDVLSSNNALQGSYNKLS  165 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~-~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~  165 (359)
                      +.++.  +++|++.++|||.+++|++++||+++++|++.+++.++|+ +++++|.|++                      
T Consensus       211 ~~ls~--~~~~~~~~~pfd~~~~G~~~geGaaavvL~~~~~A~~~g~~~i~a~I~g~~----------------------  266 (415)
T 1tqy_B          211 GRIST--ATDPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCA----------------------  266 (415)
T ss_dssp             SCBCC--CSCGGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEE----------------------
T ss_pred             cCccC--CCCCCCCcCCCCCCCCCcceeeeEEEEEECcHHHHHHCCCCceEEEEEEEE----------------------
Confidence            99885  4457789999999999999999999999999999999999 9999999987                      


Q ss_pred             cchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEE
Q psy5293         166 PYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYI  245 (359)
Q Consensus       166 p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~i  245 (359)
                                                               ...|+.+...|++   ++.++++++|++++++|+||||+
T Consensus       267 -----------------------------------------~~~dg~~~~~p~~---~~~~ai~~al~~Agl~~~dId~v  302 (415)
T 1tqy_B          267 -----------------------------------------STFDPAPGSGRPA---GLERAIRLALNDAGTGPEDVDVV  302 (415)
T ss_dssp             -----------------------------------------EEECCCTTCCCCC---SHHHHHHHHHHHHTCCGGGCCEE
T ss_pred             -----------------------------------------EccCCCCCCCCCH---HHHHHHHHHHHHcCCCHhHCCEE
Confidence                                                     4555666666665   67899999999999999999999


Q ss_pred             EeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCC
Q psy5293         246 NAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT  325 (359)
Q Consensus       246 e~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~  325 (359)
                      |.|+++|+.+|+.|++++..+|+...++|++.|+++||+++|||++++++++++|+++.|||++|+++|+|.++..+++.
T Consensus       303 e~Hgtgt~~~D~~E~~al~~~~g~~~~~v~s~K~~~GH~~gAaG~~~~~~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~  382 (415)
T 1tqy_B          303 FADGAGVPELDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLG  382 (415)
T ss_dssp             ECCCCCSHHHHHHHHHHHHHHHCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECBS
T ss_pred             EEeCCCCcCcCHHHHHHHHHHhCCCCceEeccchhhccChHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCccccCC
Confidence            99999999999999999999998767999999999999999999999999999999999999999999999998888888


Q ss_pred             cccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      +.++|.   +|++++|+|||||+|+|+||++++
T Consensus       383 ~~~~~~---~~~a~~~sfGfgG~n~~~vl~~~~  412 (415)
T 1tqy_B          383 EPRSTA---PRTALVLARGRWGFNSAAVLRRFA  412 (415)
T ss_dssp             SCBCCC---CSEEEEEEEETTTEEEEEEEEEC-
T ss_pred             CCccCC---CCEEEEecCcCCCeEEEEEEecCC
Confidence            887775   899999999999999999999985

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=100.00  E-value=3.8e-52  Score=405.89  Aligned_cols=285  Identities=40%  Similarity=0.648  Sum_probs=262.8

Q ss_pred             CCCCCCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH
Q psy5293           4 RGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA   82 (359)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~   82 (359)
                      ++. +.++|+.++.+++|+ ++++|++.||++||+++|+++| |++.||..|+++|++|++|++||||+|.++.+..+..
T Consensus       148 ~~~-~~~~p~~~~~~~~~~-~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~  225 (434)
T 2gp6_A          148 RGM-KAVSPLTVQKYMPNG-AAAAVGLERHAKAGVMTPVSACASGAEAIARAWQQIVLGEADAAICGGVETRIEAVPIAG  225 (434)
T ss_dssp             SCS-SSSCTTHHHHHSTTH-HHHHHHHHSCCCSCEECEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEECCCCCHHHHHH
T ss_pred             cCc-cccChhhhhccchhh-HHHHHhhhhcCCCCeEEeCCCCcHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHH
Confidence            455 779999999999999 9999999999999999999999 9999999999999999999999999999999988888


Q ss_pred             HHhhc-cccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccc
Q psy5293          83 FCRVR-ALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSY  161 (359)
Q Consensus        83 ~~~~~-~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~  161 (359)
                      +..++ .++.. +..|++.|+|||.+++|++++||+++++|++.+.+.++|++++++|.|++                  
T Consensus       226 ~~~~~~~ls~~-~~~p~~~~~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~I~g~~------------------  286 (434)
T 2gp6_A          226 FAQMRIVMSTN-NDDPAGACRPFDRDRDGFVFGEGGALLLIETEEHAKARGANILARIMGAS------------------  286 (434)
T ss_dssp             HHTTTSSCCCC-TTCTTTSCCSSBTTCCCCCBBCCEEEEEEEEHHHHHTTTCCCCEEEEEEE------------------
T ss_pred             HHHHHHHhcCC-CCCCCCceecccccCCCcceecceEEEEeCcHHHHHHCCCceEEEEEEEE------------------
Confidence            88888 66532 44578899999999999999999999999999999999999999999987                  


Q ss_pred             cccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCC
Q psy5293         162 NKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGD  241 (359)
Q Consensus       162 ~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~d  241 (359)
                                                                   ...|+.....|.+.+.++.++++++|++++++|+|
T Consensus       287 ---------------------------------------------~~~Dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~d  321 (434)
T 2gp6_A          287 ---------------------------------------------ITSDGFHMVAPDPNGERAGHAITRAIQLAGLAPGD  321 (434)
T ss_dssp             ---------------------------------------------EEECCSCSSSCCTTCHHHHHHHHHHHHHTTCCTTT
T ss_pred             ---------------------------------------------EecCCCCCCCCCCChHHHHHHHHHHHHHcCCCHHH
Confidence                                                         44555666677777789999999999999999999


Q ss_pred             ccEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCC
Q psy5293         242 ISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY  321 (359)
Q Consensus       242 I~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~  321 (359)
                      |||+|.|+++|..+|+.|.++|..+|+..++++++.|.++||+++|+|++++++++++|+++.|||++|+++|+|.++..
T Consensus       322 Id~ve~Hgtgt~~~D~~E~~al~~~fg~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~  401 (434)
T 2gp6_A          322 IDHVNAHATGTQVGDLAEGRAINNALGGNRPAVYAPKSALGHSVGAVGAVESILTVLALRDQVIPPTLNLVNLDPEIDLD  401 (434)
T ss_dssp             EEEEECCCCSCHHHHHHHHHHHHHHHTTCCCEECCTHHHHCBCTTTHHHHHHHHHHHHHHHSCCCCCSSCSSBCTTCCCE
T ss_pred             cCEEEEeCCcCccchHHHHHHHHHHhccCCCCcccchhhhcCchhhhHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcc
Confidence            99999999999999999999999999866899999999999999999999999999999999999999999999999888


Q ss_pred             CCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       322 ~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      +++.+.++|.   .|++++|||||||+|+|+||++|
T Consensus       402 ~v~~~~~~~~---~~~a~~~sfGfGG~na~~vl~~~  434 (434)
T 2gp6_A          402 VVAGEPRPGN---YRYAINNSFGFGGHNVAIAFGRY  434 (434)
T ss_dssp             ECCSSCCCSC---CCEEEEEEEETTTEEEEEEEECC
T ss_pred             ccCCCccCCC---CCEEEEeCCcCCCeeEEEEEEeC
Confidence            8888777765   89999999999999999999986

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=100.00  E-value=1.6e-52  Score=410.79  Aligned_cols=285  Identities=47%  Similarity=0.754  Sum_probs=264.9

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++..+.|+ ++++|++.||++||+++|+++| |++.||..|+++|++|+||++||||+|.++.+..+..+...
T Consensus       157 ~~~~~~~~~~~~~~~-~a~~ia~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~vLvgG~e~~~~~~~~~~~~~~  235 (451)
T 4ddo_A          157 RRLSPFTIPFFLSNL-AAGQISIKHRFRGPLGCPVTACAASVQAIGDAMRMIRTGEADVVLAGGAEAAFDKVSLGGFAAA  235 (451)
T ss_dssp             GGCCTTHHHHHCTTH-HHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccCcchhhccccch-HHHHHHHHhcCCCceeeecCccHHHHHHHHHHHHHHHCCCCCEEEEeccccccCHHHHHHHHHH
Confidence            678999999999999 9999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      ++++..++++|.+.++|||.+++|++++||+++++|++.+.+.+++++++++|.|++                       
T Consensus       236 ~~ls~~~~~~~~~~~~pfd~~~~g~v~gdGAaavvL~~~~~A~~~g~~i~a~i~g~~-----------------------  292 (451)
T 4ddo_A          236 RALSTGFSEEPVRASRPFDRDRDGFVMGEGAAMVVVESLDHALARGARPIAEIIGYG-----------------------  292 (451)
T ss_dssp             TCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEE-----------------------
T ss_pred             hhhccCCCcCccccccccccCCCCcEEeceEEEEEEeeHHHHHhCCCceEEEEEEEE-----------------------
Confidence            999877677788999999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.....|.+.+.+..++++++|+++|++|+||||+|
T Consensus       293 ----------------------------------------~~~d~~~~~~~~~~~~~~~~ai~~al~~Agl~~~dId~ve  332 (451)
T 4ddo_A          293 ----------------------------------------TTADAYHMTAGPDDGSGAMRAMKLALRMGDVAPEQVDYVN  332 (451)
T ss_dssp             ----------------------------------------EEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ----------------------------------------EecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence                                                    3445556666767778899999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC-CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccC-CCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP-AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEA-GGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~-~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~-~~~~~~  324 (359)
                      .|+++|..+|+.|.+++..+|+ ..+++|++.|+++||++||||++++++++++|++++|||++|+++|+|.+ +..+++
T Consensus       333 ~Hgtgt~~~d~~E~~al~~~~~~~~~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~  412 (451)
T 4ddo_A          333 AHATSTPVGDAGEIEALKTVFGVGAGPAISSTKSATGHLLGAAGAIEAAFSILALRDGVLPGTLNLEHPDPAADGLDLIG  412 (451)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHCSSSSCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCGGGTTSEECC
T ss_pred             ecCCcCcccCHHHHHHHHHHhCCCCCCcccCchhhhccCHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCcccccccccC
Confidence            9999999999999999999997 35799999999999999999999999999999999999999999999998 677777


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEeecCC
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS  359 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~~  359 (359)
                      .+.++++   .|++++|+|||||+|+|+||++|++
T Consensus       413 ~~~~~~~---~~~a~~~sfgfgG~na~~vl~~~~~  444 (451)
T 4ddo_A          413 PAARHVP---VEIALSNGFGFGGVNASVLFRRYPS  444 (451)
T ss_dssp             SSCEECC---CSEEEEEEEETTTEEEEEEEEESCC
T ss_pred             CCCCCCC---cCEEEEeeEcCCCceEEEEEeeCCC
Confidence            7777666   8999999999999999999999864

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=100.00  E-value=2.7e-52  Score=407.20  Aligned_cols=281  Identities=40%  Similarity=0.631  Sum_probs=260.9

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++.+++|+ ++++|++.||++||+++|+++| |++.||.+|+++|++|++|++||||+|.++++..+..+..+
T Consensus       147 ~~~~~~~~~~~~~~~-~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~p~~~~~~~~~  225 (430)
T 1ox0_A          147 KRVKPMTLPKALPNM-ASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLVGGTEASITPFAIAGFQAL  225 (430)
T ss_dssp             GGSCTTHHHHHSTTH-HHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             ccCChhhhhccchhH-HHHHHHHHhcCCCceEeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhC
Confidence            678999999999999 9999999999999999999999 99999999999999999999999999998899888888888


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.  +++|++.|+|||.+++|+++|||+++++|++.+++.++|++|+++|.|++                       
T Consensus       226 ~~ls~--~~~p~~~~~pFd~~~~g~~~geGAaavvL~~~~~A~~~g~~i~a~I~g~~-----------------------  280 (430)
T 1ox0_A          226 TALST--TEDPTRASIPFDKDRNGFVMGEGSGMLVLESLEHAEKRGATILAEVVGYG-----------------------  280 (430)
T ss_dssp             TCBCC--CSSTTSSSCTTBTTCCSBCBCCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             CCccC--CCCCCCCCCCCCCCCCCccccceEEEEEECcHHHHHhCCCceEEEEEEEE-----------------------
Confidence            88875  45578899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.....|.+.+.+..++++++|++++++|+||||+|
T Consensus       281 ----------------------------------------~~~dg~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve  320 (430)
T 1ox0_A          281 ----------------------------------------NTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVN  320 (430)
T ss_dssp             ----------------------------------------EEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEE
T ss_pred             ----------------------------------------EecCCCCCCCCCCChHHHHHHHHHHHHHhCcCHHHcCEEE
Confidence                                                    4445556667777788999999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTA  326 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~  326 (359)
                      .|+++|..+|+.|..++..+|+. +++|++.|+++||+++|+|++++++++++|+++.|||++|+++|+|.++..+++.+
T Consensus       321 ~Hgtgt~~~D~~E~~al~~~~g~-~~~v~s~k~~~GH~~gAaG~~~~i~~~~~l~~~~ipp~~~~~~~~p~~~~~~v~~~  399 (430)
T 1ox0_A          321 AHGTSTPANEKGESGAIVAVLGK-EVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQ  399 (430)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHCS-SSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSS
T ss_pred             EeCCcCcccCHHHHHHHHHHhCC-CceecccccccccchhhHHHHHHHHHHHHHhcCccCCCCCCCCCCCCCCcccCCCC
Confidence            99999999999999999999974 79999999999999999999999999999999999999999999999988888777


Q ss_pred             ccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         327 VTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .+++.   .|++++|+|||||+|+|+||++|+
T Consensus       400 ~~~~~---~~~a~~~sfGfGG~na~~vl~~~~  428 (430)
T 1ox0_A          400 GLEKE---IPYAISNTFGFGGHNAVLAFKRWE  428 (430)
T ss_dssp             CEECC---CSEEEEEEEETTTEEEEEEEECCC
T ss_pred             CcCCC---CCEEEEeCccCCCceEEEEEeecC
Confidence            76655   799999999999999999999986

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=1.1e-52  Score=407.62  Aligned_cols=281  Identities=48%  Similarity=0.775  Sum_probs=260.4

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++.+++|+ ++.+|++.||++||+++|+++| |++.||..|+++|++|++|++||||+|.++++.....+...
T Consensus       125 ~~~~~~~~~~~~~~~-~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~~~~~  203 (408)
T 1j3n_A          125 NRISPFFIPMMIANM-ASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVM  203 (408)
T ss_dssp             GGSCTTHHHHHSTTH-HHHHHHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             ccCChhhhhhhhhhH-HHHHHHHHhCCCCceeCccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecccCCHHHHHHHHhc
Confidence            568899999999999 9999999999999999999999 99999999999999999999999999998999988899999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.. ++.|++.|+|||.+++|+++|||+++++|++.+++.++|++++++|.|++                       
T Consensus       204 ~~ls~~-~~~p~~~~~pfd~~~dg~v~geGaaavvL~~~~~A~~~g~~i~a~i~g~~-----------------------  259 (408)
T 1j3n_A          204 RALSTR-NEEPEKASRPFTLSRDGFVMGEGAGVLVLEAYEHAKKRGARIYAELVGFG-----------------------  259 (408)
T ss_dssp             TCBCCC-TTCHHHHCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             ccccCC-CCCCCcCcccCcCCCCceEEeeeEEEEEEeeHHHHHhCCCcEEEEEEEEE-----------------------
Confidence            988742 44567889999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.+...|.+.+.+..++++++|++++++|+||||+|
T Consensus       260 ----------------------------------------~~~d~~~~~~p~~~~~~~~~ai~~al~~Agl~~~dId~ve  299 (408)
T 1j3n_A          260 ----------------------------------------RSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYIN  299 (408)
T ss_dssp             ----------------------------------------EEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ----------------------------------------EcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHcCEEE
Confidence                                                    4555666677777888999999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECP  324 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~  324 (359)
                      .|+++|..+|+.|.+++.++|+  ..++++++.|.++||+.+|||++++++++++|++++|||++|+++|+|.++..+++
T Consensus       300 ~Hgtgt~~gD~~E~~al~~~~g~~~~~~~v~s~k~~~GH~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~v~  379 (408)
T 1j3n_A          300 AHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVP  379 (408)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCS
T ss_pred             EeCCcCcccCHHHHHHHHHHhcCcCCCceEECchhhhccCHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCcccCC
Confidence            9999999999999999999987  35799999999999999999999999999999999999999999999999888887


Q ss_pred             CcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         325 TAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       325 ~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                       +.++|+   .|++++|||||||+|+|+||++|
T Consensus       380 -~~~~~~---~~~a~~~sfGfGG~na~~vl~~~  408 (408)
T 1j3n_A          380 -EPREAK---VDYALSNSFAFGGHNAVLAFKRV  408 (408)
T ss_dssp             -SCEECC---CSEEEEEEECTTSEEEEEEEECC
T ss_pred             -CCcCCC---CCEEEEecccCCcceEEEEEecC
Confidence             677776   79999999999999999999986

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=100.00  E-value=2.1e-52  Score=407.48  Aligned_cols=283  Identities=37%  Similarity=0.540  Sum_probs=259.4

Q ss_pred             CCCCcccccccCCChHHHH----HHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH
Q psy5293           8 TTLSPYFVNPFFPNMVPAG----AISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA   82 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~----~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~   82 (359)
                      +.++|+.+...++|+ +++    +|++.||++||+++|+++| |++.||..|+++|++|+||++||||+|.++++..+..
T Consensus       129 ~~~~~~~~~~~~~~~-~a~~~~~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~aLvgG~e~~~~~~~~~~  207 (424)
T 1tqy_A          129 EVDAAWLSRHMFDYL-VPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVAC  207 (424)
T ss_dssp             SCCGGGCCTTTHHHH-STTHHHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHH
T ss_pred             cccChhhhccccccc-ccchhHhHHHHhcCCCCceEeecCcccHHHHHHHHHHHHHHCCCCCEEEEeeecccCCHHHHHH
Confidence            667888887777766 555    9999999999999999999 9999999999999999999999999999889988888


Q ss_pred             HHhhccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhccccc
Q psy5293          83 FCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYN  162 (359)
Q Consensus        83 ~~~~~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~  162 (359)
                      +..++.++.. +.+|++.|+|||.+++|+++|||+++++|++.+++.++|++|+++|.|++                   
T Consensus       208 ~~~~~~ls~~-~~~p~~~~rpfd~~~~G~v~geGaaavvL~~~~~A~~~g~~i~a~I~g~~-------------------  267 (424)
T 1tqy_A          208 FDAIRATTAR-NDDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYA-------------------  267 (424)
T ss_dssp             HHHTTCBCCC-CSCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEE-------------------
T ss_pred             HHhhccccCC-CCCCCCCccCCCCCCCceeeecceeEEEeccHHHHHhCCCcEEEEEeeeE-------------------
Confidence            9999888743 44578899999999999999999999999999999999999999999987                   


Q ss_pred             ccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCc
Q psy5293         163 KLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDI  242 (359)
Q Consensus       163 ~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI  242 (359)
                                                                  ...|+.+...|.+.+.+..++++++|++++++|+||
T Consensus       268 --------------------------------------------~~~dg~~~~~p~~~g~~~~~ai~~al~~agl~~~dI  303 (424)
T 1tqy_A          268 --------------------------------------------TRCNAYHMTGLKADGREMAETIRVALDESRTDATDI  303 (424)
T ss_dssp             --------------------------------------------EEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGC
T ss_pred             --------------------------------------------EcCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCHHHC
Confidence                                                        445566666777778889999999999999999999


Q ss_pred             cEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCC
Q psy5293         243 SYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGG  320 (359)
Q Consensus       243 ~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~  320 (359)
                      ||+|.|+++|..+|+.|.+++..+|+  ..+++|++.|+++||+++|+|++++++++++|+++.|||++|+++|+|.++.
T Consensus       304 d~ve~Hgtgt~~gD~~E~~al~~~f~~~~~~~~v~s~k~~~GH~~~AaG~~~l~~~~l~l~~~~ipp~~~~~~~~p~~~~  383 (424)
T 1tqy_A          304 DYINAHGSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDL  383 (424)
T ss_dssp             CEEECCCCCCHHHHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCS
T ss_pred             CEEEecCccCcCcCHHHHHHHHHHhcccCCCCeeeccccccccChhhhHHHHHHHHHHHHHcCCcCCCCCCCCCCCCCCc
Confidence            99999999999999999999999997  3468999999999999999999999999999999999999999999999998


Q ss_pred             CCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         321 YECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       321 ~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .+++.+.++|+   .|++++++|||||+|+|+||++++
T Consensus       384 ~~v~~~~~~~~---~~~a~~~sfG~GG~n~~~vl~~~~  418 (424)
T 1tqy_A          384 DYVPLEARERK---LRSVLTVGSGFGGFQSAMVLRDAE  418 (424)
T ss_dssp             CCCBSSCEECC---CSEEEEEEEETTTEEEEEEEECHH
T ss_pred             ccCCCcccCCC---CCEEEEccccCCceEEEEEEccCC
Confidence            88888888776   799999999999999999999874

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=100.00  E-value=4.6e-52  Score=403.64  Aligned_cols=281  Identities=41%  Similarity=0.646  Sum_probs=258.5

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.+.|+.++..++|. ++++|++.||++||+++|+++| |++.||..|+++|++|++|++||||+|.++.+.....+...
T Consensus       135 ~~~~p~~~~~~~~~~-~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~A~~~I~~G~~d~~LvgG~e~~~~~~~~~~~~~~  213 (416)
T 2wge_A          135 RKVSPLAVQMIMPNG-AAAVIGLQLGARAGVMTPVSACSSGSEAIAHAWRQIVMGDADVAVCGGVEGPIEALPIAAFSMM  213 (416)
T ss_dssp             GGSCTTHHHHHSTTH-HHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEECCCCCCHHHHHHHHTT
T ss_pred             ccCCchhhccccchh-HHHHHHHHhccCCCcccccCchHHHHHHHHHHHHHHHcCCCCEEEEeeecCccchHHHHHHHhc
Confidence            568999999999999 9999999999999999999999 99999999999999999999999999999998888888888


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++.. +++|+..|+|||.+++|++++||+++++|++.+.+.++|++++++|.|++                       
T Consensus       214 ~~l~~~-~~~~~~~~~pfd~~~dg~v~geGaaavvL~~~~~A~~~g~~~~a~i~g~~-----------------------  269 (416)
T 2wge_A          214 RAMSTR-NDEPERASRPFDKDRDGFVFGEAGALMLIETEEHAKARGAKPLARLLGAG-----------------------  269 (416)
T ss_dssp             TCBCCC-TTSGGGSCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCSEEEEEEE-----------------------
T ss_pred             chhhcc-ccCCcccccccccCCCCccccCceEEEEECcHHHHHHCCCceEEEEEEEE-----------------------
Confidence            888742 34577899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.....|++.+.++.++++++|++++++|+||||+|
T Consensus       270 ----------------------------------------~~~dg~~~~~p~~~~~~~~~ai~~al~~agl~~~dId~ve  309 (416)
T 2wge_A          270 ----------------------------------------ITSDAFHMVAPAADGVRAGRAMTRSLELAGLSPADIDHVN  309 (416)
T ss_dssp             ----------------------------------------EEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ----------------------------------------EecCCCCccCCCCChHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence                                                    4455556667777788999999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTA  326 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~  326 (359)
                      .|+|||..+|+.|.+++..+ +..++++++.|.++||+++|||++++++++++|+++.|||++|+++|+|.++..+++.+
T Consensus       310 ~HgtgT~~gD~~E~~al~~~-~~~~~~v~s~k~~~GH~~gAsG~~~~i~~~l~l~~~~ipp~~~~~~~~p~~~~~~v~~~  388 (416)
T 2wge_A          310 AHGTATPIGDAAEANAIRVA-GCDQAAVYAPKSALGHSIGAVGALESVLTVLTLRDGVIPPTLNYETPDPEIDLDVVAGE  388 (416)
T ss_dssp             CCCCCCHHHHHHHHHHHHHT-TCTTSEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCTTCCSBCTTTCCEECCSS
T ss_pred             ECCCCCcCCCHHHHHHHHHh-ccCCCCccCCcccccCcHHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCCcccCCCC
Confidence            99999999999999999998 54579999999999999999999999999999999999999999999999988888776


Q ss_pred             ccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         327 VTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      .+++.   .|++++|||||||+|+|+||++|
T Consensus       389 ~~~~~---~~~a~~~sfGfGG~na~~vl~~~  416 (416)
T 2wge_A          389 PRYGD---YRYAVNNSFGFGGHNVALAFGRY  416 (416)
T ss_dssp             CEECC---CCEEEEEEEETTTEEEEEEEECC
T ss_pred             CccCC---CCEEEEeCcccCceeEEEEEEeC
Confidence            65544   79999999999999999999986

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=100.00  E-value=2.4e-52  Score=404.68  Aligned_cols=277  Identities=37%  Similarity=0.643  Sum_probs=250.7

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++.+++|+ ++++|++.||++||+++|+++| |++.||.+|+++|++|+||++||||+|.++.+..+. |..+
T Consensus       127 ~~~~~~~~~~~~~~~-~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~A~~~I~~G~~d~alvgG~e~~~~~~~~~-~~~~  204 (406)
T 2vba_A          127 KAVGPYVVTKAMASG-VSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEELCWEMACE-FDAM  204 (406)
T ss_dssp             HHHCTTHHHHHSTTH-HHHHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCHHHHHH-HHHT
T ss_pred             cccChhhhhhhhhHH-HHHHHHHhccCCCceeeeccchhHHHHHHHHHHHHHHcCCCCEEEEeeeccccChHHHH-Hhhc
Confidence            457899999999999 9999999999999999999999 999999999999999999999999999988887776 8889


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++...+++|++.|+|||.+++|+++|||+++++|++.+++.++|++||++|+|++                       
T Consensus       205 ~~ls~~~~~~p~~~~~pfd~~~~G~v~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~-----------------------  261 (406)
T 2vba_A          205 GALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHIYAEIVGYG-----------------------  261 (406)
T ss_dssp             TCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             cccccccCCCCccccCcCcCCCCceEeeceEEEEEeCcHHHHHHCCCeEEEEEEEEE-----------------------
Confidence            988753344578899999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...|+.+.+.|+  +.++.++++++|++++   +||||+|
T Consensus       262 ----------------------------------------~~~dg~~~t~p~--~~~~~~ai~~al~~ag---~dId~ve  296 (406)
T 2vba_A          262 ----------------------------------------ATSDGADMVAPS--GEGAVRCMKMAMHGVD---TPIDYLN  296 (406)
T ss_dssp             ----------------------------------------EEECCSCTTSCC--SHHHHHHHHHHHTTCC---SCCCEEE
T ss_pred             ----------------------------------------EcCCCCCCCCCC--HHHHHHHHHHHHhhCC---CCccEEE
Confidence                                                    444555555554  6788999999999999   8999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-CCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG-GYECPT  325 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~-~~~~~~  325 (359)
                      .|+++|..+|+.|.++|..+|+...++|++.|+++||+++|||++++++++++|+++.|||++|+++|+|.++ ..+++.
T Consensus       297 ~HgtgT~~gD~~E~~al~~~fg~~~~~v~s~K~~~GH~~gAaG~~~~i~~~l~l~~~~ipp~~~~~~~~~~~~~~~~v~~  376 (406)
T 2vba_A          297 SHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTE  376 (406)
T ss_dssp             CCCCSCHHHHHHHHHHHHHHHTTCCCEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCS
T ss_pred             eeCccCcccCHHHHHHHHHHhCcCCCceeCchhhhcccHHHHHHHHHHHHHHHHhcCccCCCCCCCCCCCCccccccCCc
Confidence            9999999999999999999998666899999999999999999999999999999999999999999999987 666665


Q ss_pred             cccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      +.++    +.|++++|||||||+|+|+||++|+
T Consensus       377 ~~~~----~~~~a~~~sfGfgG~na~~vl~~~~  405 (406)
T 2vba_A          377 TTDR----ELTTVMSNSFGFGGTNATLVMRKLK  405 (406)
T ss_dssp             CEEC----CCCEEEEEEEETTTEEEEEEEECC-
T ss_pred             ccCC----CCCEEEEcCCCCCCeEEEEEEEeCC
Confidence            4432    4799999999999999999999985

>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A

Probab=100.00  E-value=5e-50  Score=422.75  Aligned_cols=274  Identities=25%  Similarity=0.363  Sum_probs=249.6

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..+.+|.+.+...++ ++++|++.||++||+++|+++| ||+.||.+|+++|++|+||++||||+|.++++..+..+...
T Consensus       127 ~~~~~~~~~g~~~~~-~a~ris~~lgl~GPs~tvdtACSSsl~Al~~A~~~I~~G~~d~aLagGv~~~~~p~~~~~~~~~  205 (965)
T 3hhd_A          127 ETLVGYSMVGCQRAM-MANRLSFFFDFRGPSIALDTACSSSLMALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRL  205 (965)
T ss_dssp             TTCCTHHHHHHSTTH-HHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCCHHHHHHHHHH
T ss_pred             cccCcccccccccch-HHHHHHHHhCCCCCeeeecCchHHHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHhc
Confidence            678889999999999 9999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      ++++      |++.|++||.+++|+++|||+++++|++.++|.    +|+++|+|++                       
T Consensus       206 ~~ls------~~g~~~~Fd~~adG~~~gEGagavvL~~l~~A~----~i~a~I~g~~-----------------------  252 (965)
T 3hhd_A          206 GMLS------PEGTCKAFDTAGNGYCRSEGVVAVLLTKKSLAR----RVYATILNAG-----------------------  252 (965)
T ss_dssp             TCBC------TTCCCCTTBTTCCSBCBBCEEEEEEEEEGGGCS----SCSEEEEEEE-----------------------
T ss_pred             cCcC------CCCccccchhccCCccccceEEEEEEecHHHcC----cccEEEEeee-----------------------
Confidence            9998      789999999999999999999999999998774    5899999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCcc-CCCCCcChHHHHHHHHHHHHHcCCCCCCccEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHH-LTSPREDGRGALLAMTRALIDANLSPGDISYI  245 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~-~~~p~~~~~~~~~a~~~al~~agl~~~dI~~i  245 (359)
                                                              .+.|+.. .....|.+.++.++++++|+++|++|+||||+
T Consensus       253 ----------------------------------------~n~dg~~~~~~t~P~~~~q~~~i~~Al~~Agl~p~dIdyv  292 (965)
T 3hhd_A          253 ----------------------------------------TNTDGFKEQGVTFPSGDIQEQLIRSLYQSAGVAPESFEYI  292 (965)
T ss_dssp             ----------------------------------------EEECCCCTTCTTSCCHHHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred             ----------------------------------------ccCCCCCCCCCcCCCHHHHHHHHHHHHHHhCCCHHHhccc
Confidence                                                    3334433 11223456788999999999999999999999


Q ss_pred             EeccCCCCcccHHHHHHHHhhcC---CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC---
Q psy5293         246 NAHATSTPLGDVIELKAIGSLFP---AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG---  319 (359)
Q Consensus       246 e~h~~~t~~~d~~E~~al~~~~~---~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~---  319 (359)
                      |.|||||..+|+.|+++|..+|+   .++++|++.|+++||+++|||++++++++++|++++|||++|+++|+|+++   
T Consensus       293 EaHgTgT~~gD~~E~~Al~~~f~~~~~~~~~vgs~Ks~iGH~~~AaG~~~lik~~l~l~~~~ipp~~~~~~~np~i~~~~  372 (965)
T 3hhd_A          293 EAHGTGTKVGDPQELNGITRALCATRQEPLLIGSTKSNMGHPEPASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALL  372 (965)
T ss_dssp             ECCCCCCTTHHHHHHHHHHHHHCSSCSSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCCSBCTTCHHHH
T ss_pred             cccCCCCCCCCHHHHHHHHHHhcccCCCceeeeccccccccchhhhhHHHHHHHHHHHhcCCcCCccCCCCCCccCcccc
Confidence            99999999999999999999997   346899999999999999999999999999999999999999999999985   


Q ss_pred             --CCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         320 --GYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       320 --~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                        ...++.+..+|+   .+++++|||||||+|+|+||++++
T Consensus       373 ~~~~~v~~~~~~~~---~~~a~v~sfG~gG~Nah~il~~~~  410 (965)
T 3hhd_A          373 DGRLQVVDQPLPVR---GGNVGINSFGFGGSNVHIILRPNT  410 (965)
T ss_dssp             HTSEEECCSCEECC---SCEEEEEEECTTSEEEEEEEEECC
T ss_pred             cCceeecCCCccCC---CCeEEEecccCCCceEEEEeccCC
Confidence              345778888888   568999999999999999999875

>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea}

Probab=100.00  E-value=7.5e-50  Score=419.90  Aligned_cols=281  Identities=26%  Similarity=0.388  Sum_probs=255.6

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.+.||.+++...|+ ++++|++.||++||+++|+++| |++.||.+|+++|++|+||++||||+|.++.+.....+...
T Consensus       163 ~~~~~~~~~g~~~~~-~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGv~~~~~p~~~~~~~~~  241 (917)
T 2hg4_A          163 DEVLGYVGTGTASSV-ASGRVAYCLGLEGPAMTVDTACSSGLTALHLAMESLRRDECGLALAGGVTVMSSPGAFTEFRSQ  241 (917)
T ss_dssp             GGGGGGHHHHHCHHH-HHHHHHHHHTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSTHHHHHHTTS
T ss_pred             cccCcccccccccch-HHHHHHHhcCCCCCeEeecCCcHHHHHHHHHHHHHHHcCCCCEEEEeEeccccChhhhHhhhhc
Confidence            456778788888888 9999999999999999999999 99999999999999999999999999999999888888888


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++      |++.|+|||.+++|+++|||+++++|++.+++.++|++|+++|+|++                       
T Consensus       242 ~~ls------~~g~~~pFd~~adG~~~gEGagavVL~~l~~A~~~g~~i~a~I~G~~-----------------------  292 (917)
T 2hg4_A          242 GGLA------ADGRCKPFSKAADGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSA-----------------------  292 (917)
T ss_dssp             SCBC------TTSCCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             cCcC------CccccCcccccccCCCCcceEEEEEEeeHHHHHhCCCCeEEEEEEEE-----------------------
Confidence            8888      78999999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              .+.|+.....+.|.+.+..++++++|+++|++|+||||+|
T Consensus       293 ----------------------------------------~~~dg~~~~~~~P~~~~q~~ai~~Al~~Agl~p~dId~ve  332 (917)
T 2hg4_A          293 ----------------------------------------VNQDGASNGLTAPSGPAQQRVIRRALENAGVRAGDVDYVE  332 (917)
T ss_dssp             ----------------------------------------EEECCSCSSSSCCCHHHHHHHHHHHHHHHTCCGGGCCEEE
T ss_pred             ----------------------------------------EecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCCEEe
Confidence                                                    3333443334455678889999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcCC-----CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCC-
Q psy5293         247 AHATSTPLGDVIELKAIGSLFPA-----QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGG-  320 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~~-----~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~-  320 (359)
                      .|++||..+|+.|.++|..+|+.     .+++|++.|.++||+++|+|++++++++++|++++|||++|+++|+|.+++ 
T Consensus       333 aHgtgT~~gD~~E~~al~~~fg~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~vl~L~~~~ipp~~~~~~~~p~i~~~  412 (917)
T 2hg4_A          333 AHGTGTRLGDPIEVHALLSTYGAERDPDDPLWIGSVKSNIGHTQAAAGVAGVMKAVLALRHGEMPRTLHFDEPSPQIEWD  412 (917)
T ss_dssp             CCCCCCTTHHHHHHHHHHTTTTTSSCTTSCCEEECTHHHHCBCGGGTTHHHHHHHHHHHHHTEECCCTTCCSBCTTSCC-
T ss_pred             eccCCCccCcHHHHHHHHHHhccccCCCCceeccCcccceecchhhhHHHHHHHHHHHHhcCCcCCCCCCCCCCccCCcc
Confidence            99999999999999999999872     358899999999999999999999999999999999999999999999864 


Q ss_pred             ---CCCCCcccccccC-CccEEEEeCcCcCcceeeEEEeecC
Q psy5293         321 ---YECPTAVTEWKTD-GRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       321 ---~~~~~~~~~~~~~-~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                         ++++.+.++|+.. ++|++++|||||||+|+|+||++++
T Consensus       413 ~~~~~v~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~  454 (917)
T 2hg4_A          413 LGAVSVVSQARSWPAGERPRRAGVSSFGISGTNAHVIVEEAP  454 (917)
T ss_dssp             --CCEECCSCEECCCCSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred             ccceeecCCcccCCCCCCCCEEEEeeecCCCceEEEEeccCC
Confidence               4478889999753 5799999999999999999999975

>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea}

Probab=100.00  E-value=2.5e-49  Score=415.86  Aligned_cols=281  Identities=27%  Similarity=0.401  Sum_probs=255.8

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..+.++.+++..+|+ ++++|++.||++||+++|+++| |++.||.+|+++|++|+||++||||+|.++++..+..+...
T Consensus       141 ~~~~~~~~~g~~~~~-~a~ris~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~  219 (915)
T 2qo3_A          141 EDVEGYSVTGVAPAV-ASGRISYTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQ  219 (915)
T ss_dssp             -CTTCHHHHTTCHHH-HHHHHHHHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTT
T ss_pred             ccccccccccccccH-HHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhh
Confidence            456788888888888 9999999999999999999999 99999999999999999999999999999999888889999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      +.++      |++.|++||.+++|+++|||+++++|++.+++.++|++|+++|+|++                       
T Consensus       220 ~~ls------~~g~~~~Fd~~adG~v~gEGagavVL~~~~~A~~~g~~i~a~I~G~~-----------------------  270 (915)
T 2qo3_A          220 RALA------ADGRSKAFGAGADGFGFSEGVTLVLLERLSEARRNGHEVLAVVRGSA-----------------------  270 (915)
T ss_dssp             TCBC------SSCCCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             cccC------CCCCcccccCCCCceeecCceEEEEEeEhHHhhhCCCCeEEEEEEEE-----------------------
Confidence            9988      77999999999999999999999999999999999999999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              .+.|+.....+.|.+.++.++++++|+++|++|+||||+|
T Consensus       271 ----------------------------------------~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve  310 (915)
T 2qo3_A          271 ----------------------------------------LNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVE  310 (915)
T ss_dssp             ----------------------------------------EEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEE
T ss_pred             ----------------------------------------EecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEE
Confidence                                                    3334444444556678899999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC-----CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCC-
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP-----AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGG-  320 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~-----~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~-  320 (359)
                      .|+|||..+|+.|..+|..+|+     ..++++++.|.++||+++|+|++++++++++|+++.|||++|+++|+|.+++ 
T Consensus       311 ~HgtgT~~gD~~E~~al~~~f~~~~~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~  390 (915)
T 2qo3_A          311 AHGTGTALGDPIEANALLDTYGRDRDADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWS  390 (915)
T ss_dssp             CCCCCCTTTHHHHHHHHHHHTSSSCCTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCS
T ss_pred             ecCCCCccCCHHHHHHHHHHhccccCCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccc
Confidence            9999999999999999999997     2468999999999999999999999999999999999999999999998864 


Q ss_pred             ---CCCCCccccccc-CCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         321 ---YECPTAVTEWKT-DGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       321 ---~~~~~~~~~~~~-~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                         ++++.+..+|+. +++|++++|||||||+|+|+||++++
T Consensus       391 ~~~~~~~~~~~~w~~~~~~r~a~v~sfG~gG~Nah~vl~~~~  432 (915)
T 2qo3_A          391 SGGVALLAGNQPWRRGERTRRAAVSAFGISGTNAHVIVEEAP  432 (915)
T ss_dssp             SSSEEECSSCEECCSSSSCCEEEEEEECTTSEEEEEEEEECC
T ss_pred             cCceeeecCCcccccCCCCcEEEEeeecCCCceEEEEEeecc
Confidence               456788888864 35799999999999999999999975

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=100.00  E-value=4.3e-49  Score=447.64  Aligned_cols=272  Identities=25%  Similarity=0.352  Sum_probs=252.3

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..+.+|.+++...|+ ++++||+.||++||+++|+++| |++.||++||+.|++|+||++||||++.++++..+..|..+
T Consensus       125 ~~~~~~~~~g~~~~~-~a~ris~~~~l~Gps~tv~tACsSsl~Al~~A~~~l~~g~~d~al~gG~~~~~~p~~~~~~~~~  203 (2512)
T 2vz8_A          125 ETLVGYSMIGCQRAM-MANRLSFFFDFKGPSITIDTACSSSLLALQSAYQAIRGGECSAAVVGGLNVLLKPNSSLQFMKL  203 (2512)
T ss_dssp             TTSCGGGGGGTSTTH-HHHHHHHHHTCCSCEEEEECTTSTHHHHHHHHHHHHHTSSCSEEEEEEEECCCCHHHHHHHHHT
T ss_pred             cccCcceecccchhH-HHHHHHHHhCCCCCceeeccHhHHHHHHHHHHHHHHHcCCCCeeEEeEeccccCHHHHHHHccC
Confidence            678999999999999 9999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                      ++++      |++.|+|||.+++|+++|||+++++||+.++|.    +||++|+|++                       
T Consensus       204 ~~ls------~~g~c~~Fd~~adG~~~gEG~~~~vLk~l~~A~----~i~a~i~g~~-----------------------  250 (2512)
T 2vz8_A          204 GMLS------QDGTCRSFDAEGTGYCRAEAVVAVLLTKKSLAR----RVYATILNAG-----------------------  250 (2512)
T ss_dssp             TCBC------TTCSCCSSSTTCCCBCBBCEEEEEEEEEGGGCS----CCSEEEEEEE-----------------------
T ss_pred             CCCC------CCCCCCCCCCCCCCcceeeeEEEEEEEEHHHCC----cccEEEEEEE-----------------------
Confidence            9999      789999999999999999999999999998885    6999999987                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCcc---CCCCCcChHHHHHHHHHHHHHcCCCCCCcc
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHH---LTSPREDGRGALLAMTRALIDANLSPGDIS  243 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~---~~~p~~~~~~~~~a~~~al~~agl~~~dI~  243 (359)
                                                              .+.|+.+   .+.  |++.++.++++++|+++|++|+||+
T Consensus       251 ----------------------------------------~n~dg~~~~~~t~--P~~~~q~~~i~~al~~ag~~p~~i~  288 (2512)
T 2vz8_A          251 ----------------------------------------TNTDGSKEQGVTF--PSGDVQEQLIRSLYAPAGPDPESLE  288 (2512)
T ss_dssp             ----------------------------------------EEECCCCTTCSSS--CCHHHHHHHHHTTSGGGSSCTTSCC
T ss_pred             ----------------------------------------EcCCCCCCCCCCC--CCHHHHHHHHHHHHHHcCCCHHHCC
Confidence                                                    4555542   344  4678889999999999999999999


Q ss_pred             EEEeccCCCCcccHHHHHHHHhhcCC---CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-
Q psy5293         244 YINAHATSTPLGDVIELKAIGSLFPA---QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG-  319 (359)
Q Consensus       244 ~ie~h~~~t~~~d~~E~~al~~~~~~---~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~-  319 (359)
                      |+|+|||||+.+|+.|+++|..+|+.   .+++|++.|+++||+++|||++++++++++|++|+|||++|+++|+|.++ 
T Consensus       289 yveaHGTgT~~gD~~E~~al~~~f~~~~~~~~~igS~Ks~iGH~~~AaG~~~~ik~~l~l~~~~ipp~~~~~~~~p~~~~  368 (2512)
T 2vz8_A          289 YIEAHGTGTKVGDPQELNGIVNALCATRREPLLIGSTKSNMGHPEPASGVAALIKVLLSLEHGVWAPNLHYHTPNPEIPA  368 (2512)
T ss_dssp             EEECCCCCCTTHHHHHHHHHHHHHCSCSSSCCEEECHHHHHCBCGGGHHHHHHHHHHHHHTTTBCCCCSSCCSCCTTSSS
T ss_pred             EEEeecCCCCCCCHHHHHHHHHHhcccCCCCceeecccccccccccccchhHHHHHHHHHHCCCcCCCCCCCCCCccccc
Confidence            99999999999999999999999972   46899999999999999999999999999999999999999999999985 


Q ss_pred             ----CCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         320 ----GYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       320 ----~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                          ...++.+..+|+   .+++++|||||||+|+|+||++++
T Consensus       369 ~~~~~~~~~~~~~~~~---~~~a~vnsfG~gG~Nah~il~~~~  408 (2512)
T 2vz8_A          369 LQDGRLQVVDRPLPIR---GGNVGINSFGFGGSNVHVILQPNS  408 (2512)
T ss_dssp             SSSSSCEECCSCCBCC---SCCEEEEEEETTTEEEEEEEEECC
T ss_pred             cccCceEecCCCccCC---CCeEEEeccCCCCceeEEEEccCC
Confidence                245778888887   568999999999999999999875

>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A*

Probab=100.00  E-value=3.9e-47  Score=411.75  Aligned_cols=299  Identities=21%  Similarity=0.221  Sum_probs=245.7

Q ss_pred             CCCcccccccCCChHHHHHHHHH-cCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           9 TLSPYFVNPFFPNMVPAGAISID-MDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         9 ~~~~~~~~~~~~~~~~a~~ia~~-~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      .++++.+..+++|+ ++++|++. ||++||+++++++| |++.||..|++.|++|+||++||||+|. +++.....|..+
T Consensus      1244 ~v~~~~~~~~~~n~-~aa~vs~~~lg~~GP~~tv~tACASsl~Al~~A~~~I~sG~advalvGGvd~-~~~~~~~~f~~m 1321 (1878)
T 2uv9_A         1244 PVQKDILQESFVNT-MAAWVNMLLLSSTGPIKTPVGACATAVESLDVGYDTIMQGKARVCLVGGFDD-FQEEGSYEFANM 1321 (1878)
T ss_dssp             CCCSCTTGGGSHHH-HHHHHHHHTCCCCCCBCCBCCGGGHHHHHHHHHHHHHTTTSCSEEEEEEEEC-CCHHHHHHHHHH
T ss_pred             CCCchhhhcchHHH-HHHHHHHHhcCCCCCeEEEcCcchHHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHh
Confidence            48899999999999 99999995 99999999999999 9999999999999999999999999999 778888899999


Q ss_pred             cccccc-----CCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccc
Q psy5293          87 RALATQ-----FNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSY  161 (359)
Q Consensus        87 ~~l~~~-----~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~  161 (359)
                      +++++.     ...+|++.|+||+..++|++.+||+++++|++.+.|.++|++||++|.+++...           ++..
T Consensus      1322 ~als~~~de~a~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~-----------Dg~~ 1390 (1878)
T 2uv9_A         1322 GATSNAKEEFARGREPGEMSRPTSTTRNGFMESQGCGVQVIMTAQLALEMGVPIYGIVAMTSTAT-----------DKIG 1390 (1878)
T ss_dssp             TCBCCHHHHHTTTCCTTSSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEC-----------CCSC
T ss_pred             hhhccchhhhhcCCCcccCcCCCccCCCCCcccceeEEEEEeeHHHHHHCCCceEEEEEEEEEec-----------CCCc
Confidence            999852     134689999999999999999999999999999999999999999999987211           0000


Q ss_pred             cccCcchhhcccCCcchhhhHHHhccCCCCc-ccccccccCcccccccCCCccCCCCCc---------------------
Q psy5293         162 NKLSPYFVTRILPNMSAGQISIEHGFQGPNH-CVSTACATGAHAIGMSGDGHHLTSPRE---------------------  219 (359)
Q Consensus       162 ~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~-~~~~acAsg~~aig~~~~~~~~~~p~~---------------------  219 (359)
                      ..                       +..|.. ..+.++...            ...|++                     
T Consensus      1391 ~s-----------------------~paPg~G~~t~ar~~~------------~~~ps~~~~~~~r~~~~~~~~~~i~~~ 1435 (1878)
T 2uv9_A         1391 RS-----------------------VPAPGQGVLTTAREKS------------GNFPSPLLDIKYRRRQLELRRQQIKQW 1435 (1878)
T ss_dssp             SC-----------------------SSCCCSCGGGGGCCCC------------CSSCCGGGSHHHHHHHHHHHHHHHHHH
T ss_pred             cC-----------------------CCCCCcchhhhhhhcc------------ccCCCcccchHHHHHHHHHHHHHHHHh
Confidence            00                       001100 000011000            001111                     


Q ss_pred             ----------------------------ChHHH-------------------------------HHHHHHHHHHcCCCCC
Q psy5293         220 ----------------------------DGRGA-------------------------------LLAMTRALIDANLSPG  240 (359)
Q Consensus       220 ----------------------------~~~~~-------------------------------~~a~~~al~~agl~~~  240 (359)
                                                  .....                               ..+++.+|+++|++++
T Consensus      1436 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~Q~~~~~i~~~~~~q~~~a~~~~g~~~~~~~~~~~~ir~ALa~aGl~~~ 1515 (1878)
T 2uv9_A         1436 KESEYLYLQEEVAAIKSQRSEEDGPFDETAYLRERTEHIEREARRQEAEAQTSFGNEFWRRDSRIAPLRGALATWGLTID 1515 (1878)
T ss_dssp             HHHHHHHHHHHHHHTTTTCCSSSCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSTTTTCTTSCHHHHHHHTTTCCGG
T ss_pred             hhhhhhhhhHHHHhhhhcccccccccchhHHHHHHHHHHHHHHHHHHHHHHHhhcccccccChHHHHHHHHHHHcCCCHH
Confidence                                        00011                               2689999999999999


Q ss_pred             CccEEEeccCCCCcccHHHHHHHHhhcC------CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCC
Q psy5293         241 DISYINAHATSTPLGDVIELKAIGSLFP------AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDP  314 (359)
Q Consensus       241 dI~~ie~h~~~t~~~d~~E~~al~~~~~------~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~  314 (359)
                      ||+|+|.|||||+.+|++|.++|..+|+      .+++++++.|+++||+.||+|++++++++++|++|+|||++|+++|
T Consensus      1516 DId~veaHGTgT~~gD~~E~~al~~~f~~~~r~~~~pl~v~s~KsliGH~~gAAGa~~li~~l~~L~~g~iPp~~n~d~~ 1595 (1878)
T 2uv9_A         1516 DLGVASFHGTSTVANDKNESDVICQQLKHLGRTKGNAVLGIFQKYLTGHPKGAAGAWMLNGCLQVLNTGIVPGNRNADNV 1595 (1878)
T ss_dssp             GEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTTCCEEEECTHHHHCBCTTCHHHHHHHHHHHHHTTCEECCCTTCCSB
T ss_pred             HeeEEEEcCCCCcccCHHHHHHHHHHHhhcCCCCCCceeEEecccccCChHhHhhHHHHHHHHHHHhcCCCCCCCCCCCC
Confidence            9999999999999999999999999986      2469999999999999999999999999999999999999999999


Q ss_pred             CccCC-CCCC--CCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         315 CEEAG-GYEC--PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       315 ~~~~~-~~~~--~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      +|.+. +.++  +.+..+|  +++|++++|||||||+|+|+|+++.
T Consensus      1596 dp~i~~~~~v~~~~~~~~~--~~~r~a~v~SFGFGG~NahvIle~p 1639 (1878)
T 2uv9_A         1596 DKVMEQFDYIVYPSRSIKT--DGIKAFSVTSFGFGQKGAQAIGVHP 1639 (1878)
T ss_dssp             CGGGGGCTTEECCSSCEEC--SCCCEEEEEEEETTTEEEEEEEECT
T ss_pred             CCccccccccccccccccC--CCCCEEEEccCCCCCeeEEEEEecC
Confidence            99984 4444  4444443  4689999999999999999999975

>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A*

Probab=100.00  E-value=1.9e-46  Score=407.13  Aligned_cols=329  Identities=19%  Similarity=0.189  Sum_probs=246.3

Q ss_pred             CCCcccccccCCChHHHHHHHHH-cCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           9 TLSPYFVNPFFPNMVPAGAISID-MDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         9 ~~~~~~~~~~~~~~~~a~~ia~~-~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      .++++.+..+++|+ ++++|++. ||++||+++|+++| ||+.||..|++.|++|+||++||||+|. +++.....|..+
T Consensus      1269 ~v~~~~~~~~~~n~-~aa~is~~~lgl~GP~~tv~tACASsl~Al~~A~~~I~sG~advaLvGGvd~-~~~~~~~~f~~m 1346 (1887)
T 2uv8_A         1269 PVQNDILQESFINT-MSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNM 1346 (1887)
T ss_dssp             CCCTTHHHHHSTTH-HHHHHHHHTTCCCSCCCCCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHT
T ss_pred             CCCcchhhcchhhH-HHHHHHHHHcCCccceEEeecccccHHHHHHHHHHHHHcCCCCEEEEeeecc-CChHHHHHHHHh
Confidence            47889999999999 99999995 99999999999999 9999999999999999999999999999 678888889999


Q ss_pred             cccccc-----CCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccc
Q psy5293          87 RALATQ-----FNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSY  161 (359)
Q Consensus        87 ~~l~~~-----~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~  161 (359)
                      +++++.     ...+|++.|+||+..++|++++||+++++|++.+.|.++|++||++|.|++...           ++..
T Consensus      1347 ~als~~~~e~~~g~~p~~~~RPfd~~r~Gfv~gEGag~vVL~~~~~A~~~G~~I~avI~g~a~~~-----------Dg~~ 1415 (1887)
T 2uv8_A         1347 KATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATAT-----------DKIG 1415 (1887)
T ss_dssp             TCBCCHHHHHHTTCCGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEEEEC-----------CCSC
T ss_pred             hhhccchhhhcccCCCccCcCCCcccCCCcccccceEEEEEccHHHHHHCCCceEEEEeeeEEec-----------CCcc
Confidence            999842     134588999999999999999999999999999999999999999999987211           0000


Q ss_pred             cccC-cchh-h---cccC---Ccchhhh-----HHHhc--------------------cCCCCc-c---cccc-------
Q psy5293         162 NKLS-PYFV-T---RILP---NMSAGQI-----SIEHG--------------------FQGPNH-C---VSTA-------  197 (359)
Q Consensus       162 ~~~~-p~~~-~---~~~~---~~~a~~i-----a~~~g--------------------~~gp~~-~---~~~a-------  197 (359)
                      ..+. |... .   +-..   ..++..+     ..++.                    ..+..- .   .++.       
T Consensus      1416 ~s~paPg~G~lt~ar~~~G~gt~ps~~ld~~~r~~ql~~~~~~i~~~~~~~~~~l~~~~~~~g~~~~~~~~Qe~~~~i~~ 1495 (1887)
T 2uv8_A         1416 RSVPAPGKGILTTAREHHSSVKYASPNLNMKYRKRQLVTREAQIKDWVENELEALKLEAEEIPSEDQNEFLLERTREIHN 1495 (1887)
T ss_dssp             SCTTCCCSGGGGGGCCCCSCCSSCCGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCSCCHHHHHHHHHHHHH
T ss_pred             ccCCCCCccccccccccccccCCCCcccchHHHHHHHHHHHHHHHHHhhhhhhhhhhhhhhhcccchhhHHHHHHHHHHH
Confidence            0000 0000 0   0000   0000000     00000                    000000 0   0000       


Q ss_pred             --cccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC------C
Q psy5293         198 --CATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP------A  269 (359)
Q Consensus       198 --cAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~------~  269 (359)
                        ..--..+...-  +..+...    .+...+++.+|+++|++|+||+|+|.|||||..+|++|.++|..+|+      .
T Consensus      1496 ~~~~~~~~~~~~~--~~~~~~~----d~~~~air~ALa~AGl~p~DId~veaHGTgT~~gD~~E~~Al~~~f~~~gr~~~ 1569 (1887)
T 2uv8_A         1496 EAESQLRAAQQQW--GNDFYKR----DPRIAPLRGALATYGLTIDDLGVASFHGTSTKANDKNESATINEMMKHLGRSEG 1569 (1887)
T ss_dssp             HHHHHHHHHHHHH--TTSTTTT----CSSSCHHHHHHHTTTCCGGGEEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCTT
T ss_pred             HHHHHHHHHHHhh--ccchhhc----hHHHHHHHHHHHHcCCCHHHceEEEecCCCCcccCHHHHHHHHHHHhhhccCCC
Confidence              00000000000  0000000    01146899999999999999999999999999999999999999995      2


Q ss_pred             CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-CCC--CCCcccccccCCccEEEEeCcCcC
Q psy5293         270 QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG-GYE--CPTAVTEWKTDGRRVALKNSFGFG  346 (359)
Q Consensus       270 ~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~-~~~--~~~~~~~~~~~~~~~~~~~~~g~g  346 (359)
                      ++++|++.|+++||+.||+|++++++++++|++|+|||++|+++|+|.+. ..+  ++.+..+|  +++|++++||||||
T Consensus      1570 ~pl~v~s~KsliGH~~gAAGa~~li~~ll~L~~g~iPpt~n~d~~dp~l~~~~~l~~~~~~~~~--~~~r~a~v~SFGFG 1647 (1887)
T 2uv8_A         1570 NPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFEYVLYPSKTLKT--DGVRAVSITSFGFG 1647 (1887)
T ss_dssp             CCEEEECTHHHHCBCGGGHHHHHHHHHHHHHTTCEECCCTTCSSBCGGGGGCTTEECCSSCEEC--SCCCEEEEEEEETT
T ss_pred             CcEEEEecccceechHHHHhHHHHHHHHHHHHhCCcCCcCCCCCCCCccccccccccccccccC--CCCCEEEEccCCCC
Confidence            46999999999999999999999999999999999999999999999984 444  36666666  35899999999999


Q ss_pred             cceeeEEEeecC
Q psy5293         347 GTNACLCIAEYK  358 (359)
Q Consensus       347 G~~~~~il~~~~  358 (359)
                      |+|+|+|+++.+
T Consensus      1648 G~NahvIle~p~ 1659 (1887)
T 2uv8_A         1648 QKGGQAIVVHPD 1659 (1887)
T ss_dssp             TEEEEEEEECTH
T ss_pred             CccEEEEEecCC
Confidence            999999999863

>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}

Probab=100.00  E-value=7.6e-48  Score=405.64  Aligned_cols=302  Identities=20%  Similarity=0.240  Sum_probs=244.2

Q ss_pred             CCCcccccccCCChHHHHHHHH-HcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           9 TLSPYFVNPFFPNMVPAGAISI-DMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         9 ~~~~~~~~~~~~~~~~a~~ia~-~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      .++|+.+..+++|+ +++++++ .||++||+++|+++| |++.||..|++.|++|+||++||||+|. +++.....|..+
T Consensus      1070 ~v~~~~l~~~~~nt-~Aa~Vs~~~LGl~GPs~TVdtACASSL~AL~lA~~aIrsGeaDvaLVGGvE~-msp~~~~~Fa~m 1147 (1688)
T 2pff_A         1070 PVQNDILQESFINT-MSAWVNMLLISSSGPIKTPVGACATSVESVDIGVETILSGKARICIVGGYDD-FQEEGSFEFGNM 1147 (1688)
T ss_dssp             CCCSTTHHHHCTHH-HHHHHHHSSCCCCCCCCCCCCTTTTTHHHHHHHHHHHHTTTCSCBCCCCCCC-CCTTTTTTTTTT
T ss_pred             CCCcchhccccHHH-HHHHHHHHHcCCcCCeEEecCCCchHHHHHHHHHHHHHCCCCCEEEEeeecc-CCHHHHHHHHhc
Confidence            47888888999999 9999999 799999999999999 9999999999999999999999999999 466666778888


Q ss_pred             ccccccC-----CCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccc
Q psy5293          87 RALATQF-----NNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSY  161 (359)
Q Consensus        87 ~~l~~~~-----~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~  161 (359)
                      +++++..     ..+|++.|+|||.+++|++++||+++++|++.+.|.++|++|+++|.+++...           ++..
T Consensus      1148 gaLS~~~~e~a~G~~Pd~~cRPFd~~rdGfv~GEGAGavVLesle~Al~~G~~IyAvI~Gsavns-----------Dg~~ 1216 (1688)
T 2pff_A         1148 KATSNTLEEFEHGRTPAEMSRPATTTRNGFMEAQGAGIQIIMQADLALKMGVPIYGIVAMAATAT-----------DKIG 1216 (1688)
T ss_dssp             SCSCCTTTTTTSSCCSSSSCCSSSSSCCCCCCCSCCEEEEEECSHHHHSSSCCCCCEECCCCCCC-----------CCCC
T ss_pred             cccccChhhhhcCCChhhccCcCccCCCCCccccceEEEEeCcHHHHHHCCCceEEEEEEEEEEC-----------CCCc
Confidence            8888532     23588999999999999999999999999999999999999999999886221           0000


Q ss_pred             cccCcchhhcccCCcchhhhHHHhccCCCCccc-ccccccCcccccccCCCccCCCCCcC--------------------
Q psy5293         162 NKLSPYFVTRILPNMSAGQISIEHGFQGPNHCV-STACATGAHAIGMSGDGHHLTSPRED--------------------  220 (359)
Q Consensus       162 ~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~-~~acAsg~~aig~~~~~~~~~~p~~~--------------------  220 (359)
                      ..+                       ..|...+ +.+....         + ..+.|++.                    
T Consensus      1217 ~Si-----------------------pAPg~GiLt~Ar~~~---------G-~~taPSp~ld~~~R~rql~~~~~~i~~~ 1263 (1688)
T 2pff_A         1217 RSV-----------------------PAPGKGILTTAREHH---------S-SVKYASPNLNMKYRKRQLVTREAQIKDW 1263 (1688)
T ss_dssp             SSS-----------------------CCCCSSSSSSSSSCC---------C-CSSCSSCCSCTTCCHHHHSHHHHHHHHH
T ss_pred             cCC-----------------------CCCCCCccchhhhcc---------c-ccCCCCcccChHHHHHHHHHHHHHHHHH
Confidence            000                       0000000 0000000         0 00011111                    


Q ss_pred             -----------------------h-----------------------------HHHHHHHHHHHHHcCCCCCCccEEEec
Q psy5293         221 -----------------------G-----------------------------RGALLAMTRALIDANLSPGDISYINAH  248 (359)
Q Consensus       221 -----------------------~-----------------------------~~~~~a~~~al~~agl~~~dI~~ie~h  248 (359)
                                             .                             .+..++++++|+++|++|+||||+|.|
T Consensus      1264 ~~~e~~~l~~e~~~~g~~~~~~~aQer~~~i~~~~~r~~~~~~~~~Gn~f~~~d~~~~aIr~ALa~AGLtpdDIdyVEaH 1343 (1688)
T 2pff_A         1264 VENELEALKLEAEEIPSEDQNEFLLERTREIHNEAESQLRAAQQQWGNDFYKRDPRIAPLRGALATYGLTIDDLGVASFH 1343 (1688)
T ss_dssp             HHHHHHHHHHHSSSSCSSHHHHHHHHHHHHTHHHHHHHHHHHHHTTTTSSSSSCTTCCSHHHHTTSSCSSTTCCCCCCCC
T ss_pred             HHhhHHHHHHHHhhhcccchhhHHHHHHHHHHHHHHHHHHHHHhccCCceecchHHHHHHHHHHHHcCCCHHHeeEEEEe
Confidence                                   0                             012467999999999999999999999


Q ss_pred             cCCCCcccHHHHHHHHhhcC------CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC-CC
Q psy5293         249 ATSTPLGDVIELKAIGSLFP------AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG-GY  321 (359)
Q Consensus       249 ~~~t~~~d~~E~~al~~~~~------~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~-~~  321 (359)
                      ||||+.+|++|.++|..+|+      .+++++++.|+++|||.||||++++++++++|++|+|||++|+++|+|.++ ..
T Consensus      1344 GTGT~lgD~iE~~AL~~af~~~gr~~g~pl~V~S~KsliGHp~GAAGa~~Lik~llaL~~G~IPptln~d~pdp~l~~~d 1423 (1688)
T 2pff_A         1344 GTSTKANDKNESATINEMMKHLGRSEGNPVIGVFQKFLTGHPKGAAGAWMMNGALQILNSGIIPGNRNADNVDKILEQFE 1423 (1688)
T ss_dssp             CCSCSSSSTTTTTTTGGGTGGGCCCTTCCCCCCCCTTTTCCCSSTHHHHHHHHHHHHSTTCCCCCCSCCSCCCTTCCSSC
T ss_pred             CCCCccccHHHHHHHHHHHhhhCcCCCCeEEEEeChhhhcchHHHhhHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCcCC
Confidence            99999999999999999996      235899999999999999999999999999999999999999999999984 34


Q ss_pred             CC--CCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         322 EC--PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       322 ~~--~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      ++  +.+..+|+  ++|++++|||||||+|+|+|+++.+
T Consensus      1424 ~v~~p~~~~~~~--~~r~AlVnSFGFGGtNAhvILe~p~ 1460 (1688)
T 2pff_A         1424 YVLYPSKTLKTD--GVRAVSITSFGFGQKGGQAIVVHPD 1460 (1688)
T ss_dssp             CCCSCTTCCSSS--SSSCCCCCCCCSTTCCCCCCEECSS
T ss_pred             ceeecCccccCC--CCcEEEEeeECCCCeeEEEEEeCCC
Confidence            44  66666663  5899999999999999999999864

>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*

Probab=100.00  E-value=3.4e-44  Score=406.19  Aligned_cols=280  Identities=23%  Similarity=0.297  Sum_probs=242.3

Q ss_pred             cccccCCChHHHHHHHHH-cCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccc
Q psy5293          14 FVNPFFPNMVPAGAISID-MDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALAT   91 (359)
Q Consensus        14 ~~~~~~~~~~~a~~ia~~-~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~   91 (359)
                      .++..++|+ +++++++. +|++||+++|+++| ||+.||..|+++|++|+||++||||+|. +++..+..|..+++++.
T Consensus      2709 ~~~~~~~~~-~aa~is~~~lGl~GPs~tV~tACSSsl~Al~~A~~~IrsG~~d~aLaGGve~-ls~~~~~~f~~~~als~ 2786 (3089)
T 3zen_D         2709 ILQEVLPNV-VAAHVMQSYVGGYGAMVHPVGACATAAVSVEEGVDKIKLGKADLVIAGGFDD-LTLEAIIGFGDMAATAD 2786 (3089)
T ss_dssp             HHHHTSTTH-HHHHHHHHTTCCCSCEECCBCTTCHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHHTCBCC
T ss_pred             hhccccccH-HHHHHHHHHcCCCCCceeeccchhhHHHHHHHHHHHHHCCCCCeeEEeeecc-cCHHHHHHHHHhhhhhc
Confidence            456778898 99999875 59999999999999 9999999999999999999999999999 78888888999988763


Q ss_pred             -----cCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293          92 -----QFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus        92 -----~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                           ..+.+|++.|+|||.+++|+++|||+++++|++.++|.++|++||++|.+.+                       
T Consensus      2787 ~~~~~~~~~sp~~~crpFd~~~dG~v~GEGAgavVL~~~e~A~~~G~~I~avI~g~~----------------------- 2843 (3089)
T 3zen_D         2787 TEMMRAKGISDSKFSRANDRRRLGFLEAQGGGTILLARGDLALKMGLPVLAVVGYAQ----------------------- 2843 (3089)
T ss_dssp             HHHHHHTTCCTTTSCCSSBTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCEEEEEEE-----------------------
T ss_pred             chhhhhccCCcccccCccccCCCCEEEeccceEEEEeeHHHHHhCCCceEEEEEEEE-----------------------
Confidence                 1245688999999999999999999999999999999999999999887765                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcC-------hHHHHHHHHHHHHHcCCCC
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPRED-------GRGALLAMTRALIDANLSP  239 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~-------~~~~~~a~~~al~~agl~~  239 (359)
                                                              .+.|+.....|.|.       ..+..++++++|+++|++|
T Consensus      2844 ----------------------------------------~n~Dg~~~~~~aP~~g~~~a~~~~q~~ai~~AL~~AGl~p 2883 (3089)
T 3zen_D         2844 ----------------------------------------SFADGVHTSIPAPGLGALGAARGGRESTLARSLAQLGVGA 2883 (3089)
T ss_dssp             ----------------------------------------EECCCCCCCSSCCCCGGGGGSTTGGGSHHHHHHHTTTCCG
T ss_pred             ----------------------------------------EecCCcccCccCCchhHHhHhhhhHHHHHHHHHHHcCCCH
Confidence                                                    22222222222221       1244578999999999999


Q ss_pred             CCccEEEeccCCCCcccHHHHH---HHHhhcCC---CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCC
Q psy5293         240 GDISYINAHATSTPLGDVIELK---AIGSLFPA---QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLED  313 (359)
Q Consensus       240 ~dI~~ie~h~~~t~~~d~~E~~---al~~~~~~---~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~  313 (359)
                      +||||+|.|||||..+|++|.+   ++..+|+.   .+++|++.|+++||++||||++++++++++|++++|||++|+++
T Consensus      2884 ~DIdyVEaHGTGT~lgD~~E~~al~al~~~fg~~~~~~~~v~s~Ks~iGH~~gAAG~~~lik~ll~L~~g~iPpt~~~~~ 2963 (3089)
T 3zen_D         2884 DDIAVISKHDTSTLANDPNETELHERIADSMGRAPGNPLFIVSQKTLTGHAKGGAAVFQMMGLCQILRDGVIPPNRSLDC 2963 (3089)
T ss_dssp             GGEEEEECCCCCCTTHHHHHHHHHHHHHHHTTCCTTCCEEEECSHHHHCBCSTTHHHHHHHHHHHHHHHCCBCCCTTCSS
T ss_pred             HHeeEEEEecCCcccccHHHHHHHHHHHHHhCccCCCcceecccccccCCchhhhhHHHHHHHHHHHhcCccCCCCCCCC
Confidence            9999999999999999999999   67778872   46999999999999999999999999999999999999999999


Q ss_pred             CCccCC---CCCCCCccccccc-CCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         314 PCEEAG---GYECPTAVTEWKT-DGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       314 ~~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      |+|.+.   .++++.+..+|+. ..+|++++|||||||+|+|+||++++
T Consensus      2964 ~np~i~~~~~~~~~~~~~~w~~~~~~r~a~vnSfGfGG~NahvVle~~~ 3012 (3089)
T 3zen_D         2964 VDDELATSGHFVWVREPLDLRGKFPLKAGLVTSLGFGHVSGLVALVHPE 3012 (3089)
T ss_dssp             BCGGGGGCSSEEECSSCBCCCTTSCCCEEEEEEEETTTEEEEEEEECGG
T ss_pred             CCCCccccCCeeecCCCccCCCCCCCCEEEEccccCCCCeEEEEEecCc
Confidence            999986   3456778888853 35799999999999999999999975

>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A

Probab=99.96  E-value=1.9e-29  Score=243.33  Aligned_cols=230  Identities=22%  Similarity=0.319  Sum_probs=179.9

Q ss_pred             HHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH-H--------------H----
Q psy5293          24 PAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS-I--------------A----   81 (359)
Q Consensus        24 ~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~-~--------------~----   81 (359)
                      ++.++++.+|+  ++|+++|+++| |++.||..|+++|++|++|++||||+|+++.... .              .    
T Consensus        69 ~a~~ia~~lgl~~~~p~~~v~~aCaSg~~Ai~~A~~~I~~G~~d~vlagG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~  148 (397)
T 1wl4_A           69 PVRQASVGAGIPYSVPAWSCQMICGSGLKAVCLAVQSIGIGDSSIVVAGGMENMSKAPHLAYLRTGVKIGEMPLTDSILC  148 (397)
T ss_dssp             HHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESTTCCEECCCSSCCSSSCCCCEEHHHH
T ss_pred             HHHHHHHHcCCCCCccEEEecCcChhHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccccccCcccccchhcc
Confidence            69999999999  79999999999 9999999999999999999999999998763210 0              0    


Q ss_pred             -H----H--Hhhcccc---------------------------c----cCC----------------CCCCC--------
Q psy5293          82 -A----F--CRVRALA---------------------------T----QFN----------------NEPAQ--------   99 (359)
Q Consensus        82 -~----~--~~~~~l~---------------------------~----~~~----------------~~~~~--------   99 (359)
                       .    +  ..++.++                           +    .+.                -++++        
T Consensus       149 ~g~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~d~~~r~~~t~  228 (397)
T 1wl4_A          149 DGLTDAFHNCHMGITAENVAKKWQVSREDQDKVAVLSQNRTENAQKAGHFDKEIVPVLVSTRKGLIEVKTDEFPRHGSNI  228 (397)
T ss_dssp             HTTBCTTTCCBHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSCSCCCTTCCH
T ss_pred             ccccCccccchHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCcccceeeeeeccCCCceeeccccccCCCCCH
Confidence             0    0  0011110                           0    000                00221        


Q ss_pred             ----CCCC-ccCCCCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293         100 ----ASRP-FDKRRDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus       100 ----~~~~-fd~~~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                          .++| ||++++|++       ++||+++++|++.+.+.+++++++++|.|++                        
T Consensus       229 e~~~~~rpvfd~~~~G~vt~~~~s~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~------------------------  284 (397)
T 1wl4_A          229 EAMSKLKPYFLTDGTGTVTPANASGINDGAAAVVLMKKSEADKRGLTPLARIVSWS------------------------  284 (397)
T ss_dssp             HHHHTSCCSSCCSSCCCCCTTSBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEE------------------------
T ss_pred             HHHhcCCCccCCCCCCCEechhcCCccchhheeeEecHHHHHHcCCCccEEEEEEE------------------------
Confidence                4788 999999999       9999999999999999999999999999986                        


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA  247 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~  247 (359)
                                                             ...     ..|++.+.++..+++++|+++|++|+||||+|.
T Consensus       285 ---------------------------------------~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie~  320 (397)
T 1wl4_A          285 ---------------------------------------QVG-----VEPSIMGIGPIPAIKQAVTKAGWSLEDVDIFEI  320 (397)
T ss_dssp             ---------------------------------------EEE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEE
T ss_pred             ---------------------------------------Eee-----cChhhccchHHHHHHHHHHHcCCCHHHCCEEEE
Confidence                                                   111     123334456789999999999999999999998


Q ss_pred             ccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCC
Q psy5293         248 HATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT  325 (359)
Q Consensus       248 h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~  325 (359)
                      |+.++.     ...++.+.|+  ..++++++.|.++|||+||+|+.++++++++|+++                      
T Consensus       321 ~d~f~~-----~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~----------------------  373 (397)
T 1wl4_A          321 NEAFAA-----VSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERM----------------------  373 (397)
T ss_dssp             CCSBHH-----HHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH----------------------
T ss_pred             ecccHH-----HHHHHHHHcCCCCcCcCCCcCccccCCChhhhHHHHHHHHHHHHhhc----------------------
Confidence            876542     2223444455  34789999999999999999999999999999931                      


Q ss_pred             cccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                              +.|+++++..+.||.+.++|||+
T Consensus       374 --------~~~~gl~~~~~ggG~~~a~~~e~  396 (397)
T 1wl4_A          374 --------GRSRGVAALCIGGGMGIAMCVQR  396 (397)
T ss_dssp             --------TCCEEEEEEEETTTEEEEEEEEE
T ss_pred             --------CCCEEEEEEecccchheEEEEEe
Confidence                    25899999887789999999987

>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=99.96  E-value=2.9e-29  Score=242.38  Aligned_cols=235  Identities=24%  Similarity=0.253  Sum_probs=178.5

Q ss_pred             ChHHHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCC-HHH--------------H--
Q psy5293          21 NMVPAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCIS-QLS--------------I--   80 (359)
Q Consensus        21 ~~~~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~~--------------~--   80 (359)
                      +. ++.+++..+|+  ++|+++|+++| |++.||..|+++|++|++|++||+|+|.++. +..              +  
T Consensus        64 ~~-~a~~va~~lGl~~~~p~~~v~~aCas~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~  142 (401)
T 1ulq_A           64 RN-VARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRAPYAVPKPERGFPTGNLVMYD  142 (401)
T ss_dssp             TT-HHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSCCEEECCCCSSSCCSCEEEEE
T ss_pred             Ch-HHHHHHHHhCCCCCccEeeccccchHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCcccccccccccccCcccccc
Confidence            45 69999999999  78999999999 9999999999999999999999999998654 210              0  


Q ss_pred             --------HHHH--h-----hccc---------------------------cc----cCCC----------------CCC
Q psy5293          81 --------AAFC--R-----VRAL---------------------------AT----QFNN----------------EPA   98 (359)
Q Consensus        81 --------~~~~--~-----~~~l---------------------------~~----~~~~----------------~~~   98 (359)
                              ..+.  .     ++..                           .+    .+.+                +++
T Consensus       143 ~~~~~~~~~g~~p~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~~~~ei~P~~~~~~~~~~~~~~d  222 (401)
T 1ulq_A          143 TTLGWRFVNPKMQALYGTESMGETAENLAEMYGIRREEQDRFALLSHQKAVRAWEEGRFQDEVVPVPVKRGKEEILVEQD  222 (401)
T ss_dssp             TTSSCCSCCHHHHHHSCCCCHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEETTEEEEECSC
T ss_pred             hhhhccccccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhhhhcCCcccceeceeecCCCCceeeccc
Confidence                    0110  0     0110                           00    0000                011


Q ss_pred             C------------CCCC-ccCCCCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhc
Q psy5293          99 Q------------ASRP-FDKRRDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQ  158 (359)
Q Consensus        99 ~------------~~~~-fd~~~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~  158 (359)
                      +            .++| |+.  +|++       ++||+++++|++.+.+.++|++++++|+|++               
T Consensus       223 ~~~r~~~t~e~~~~~rpif~~--~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~---------------  285 (401)
T 1ulq_A          223 EGPRRDTSLEKLAALRPVFRE--GGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIA---------------  285 (401)
T ss_dssp             SCCCTTCCHHHHHHSCBSSST--TCSCBGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEE---------------
T ss_pred             cccCCCCCHHHHhhCCCccCC--CCCeechhcCCccchheEEEEecHHHHHHcCCCceEEEEEEE---------------
Confidence            1            2356 664  5766       7999999999999999999999999999987               


Q ss_pred             ccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCC
Q psy5293         159 GSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLS  238 (359)
Q Consensus       159 ~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~  238 (359)
                                                                      ...+     .|+..+.++..+++++|+++|++
T Consensus       286 ------------------------------------------------~~~~-----~p~~~~~~~~~a~~~al~~Agl~  312 (401)
T 1ulq_A          286 ------------------------------------------------VAGV-----PPRIMGIGPVPATRKALERAGLS  312 (401)
T ss_dssp             ------------------------------------------------EEEC-----CGGGGGGTHHHHHHHHHHHTTCC
T ss_pred             ------------------------------------------------EecC-----CccccchhHHHHHHHHHHHcCCC
Confidence                                                            2111     12222346688999999999999


Q ss_pred             CCCccEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccC
Q psy5293         239 PGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEA  318 (359)
Q Consensus       239 ~~dI~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~  318 (359)
                      |+|||++|.|++++. .+...++.++.+....++++++.+..+|||+||+|+.+++++++||+++               
T Consensus       313 ~~dId~ie~heafa~-~~l~~~~~lg~~~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~~---------------  376 (401)
T 1ulq_A          313 FSDLGLIELNEAFAA-QALAVLREWSLSMEDQRLNPNGGAIALGHPLGASGARILTTLVHEMRRR---------------  376 (401)
T ss_dssp             GGGCSEEEECCSBHH-HHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT---------------
T ss_pred             HHHcCEEEEecchHH-HHHHHHHHcCCCCCCCccCCCCcccccCCCcchHHHHHHHHHHHHHhhc---------------
Confidence            999999999999884 3333334433322345788889998999999999999999999999943               


Q ss_pred             CCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         319 GGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       319 ~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                                     +.++++++++++||++.++||+++
T Consensus       377 ---------------~~~~gl~~~~~ggG~~~a~v~~~~  400 (401)
T 1ulq_A          377 ---------------KVQFGLATMCIGVGQGIAVVVEGM  400 (401)
T ss_dssp             ---------------TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred             ---------------CCCEEEEEeecCCcccEEEEEEeC
Confidence                           268999999999999999999985

>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C*

Probab=99.96  E-value=9.9e-29  Score=237.80  Aligned_cols=233  Identities=19%  Similarity=0.233  Sum_probs=180.4

Q ss_pred             ChHHHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCC-HHHHH-----HHH-------
Q psy5293          21 NMVPAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCIS-QLSIA-----AFC-------   84 (359)
Q Consensus        21 ~~~~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~-~~~~~-----~~~-------   84 (359)
                      +. ++.++++.+|+  ++|+++|+++| |++.||..|+++|++|++|++||+|+|.++. +....     .+.       
T Consensus        69 ~~-~a~~ia~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~  147 (390)
T 1wdk_C           69 WN-IARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHVSMMHGVDPNPHMSLYAAKAS  147 (390)
T ss_dssp             TT-HHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCTTTTBCCCGGGGGTSCGGG
T ss_pred             Cc-HHHHHHHHcCCCCCccEEEEcccchhHHHHHHHHHHHHHcCCCCEEEEeeeeccccCCcccccccCccccccCCcch
Confidence            55 79999999999  89999999999 9999999999999999999999999998643 21000     000       


Q ss_pred             -hhcc----------cccc---------------------CCCC--CC------CCCCCccCC-----------------
Q psy5293          85 -RVRA----------LATQ---------------------FNNE--PA------QASRPFDKR-----------------  107 (359)
Q Consensus        85 -~~~~----------l~~~---------------------~~~~--~~------~~~~~fd~~-----------------  107 (359)
                       .++.          +++.                     +.++  |.      +.+++||.+                 
T Consensus       148 ~~~g~~a~~~~~~~g~s~e~~~~~a~~s~~~a~~a~~~g~~~~ei~p~~~~~~~~~~~~fd~d~~~r~~~t~e~~~~~~~  227 (390)
T 1wdk_C          148 GMMGLTAEMLGKMHGISREQQDAFAVRSHQLAHKATVEGKFKDEIIPMQGYDENGFLKIFDYDETIRPDTTLESLAALKP  227 (390)
T ss_dssp             GSHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEECTTCCEEEECSCTTCCTTCCHHHHHTSCC
T ss_pred             hHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhcCCcccceeeeeeccCCCcceeeccccccCCCCCHHHHhcCCC
Confidence             0111          1110                     0111  21      112688887                 


Q ss_pred             ----CCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCc
Q psy5293         108 ----RDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNM  176 (359)
Q Consensus       108 ----~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  176 (359)
                          ++|++       ++||+++++|++.+.+.+++++++++|+|++                                 
T Consensus       228 i~~p~~G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~---------------------------------  274 (390)
T 1wdk_C          228 AFNPKGGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAVIRSMA---------------------------------  274 (390)
T ss_dssp             SSCTTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCSEEEEEEE---------------------------------
T ss_pred             cccCCCCcEechhcCcccchhheeEEecHHHHHHcCCCccEEEEEEE---------------------------------
Confidence                79999       9999999999999999999999999999986                                 


Q ss_pred             chhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCccc
Q psy5293         177 SAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGD  256 (359)
Q Consensus       177 ~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d  256 (359)
                                                    ..+     ..|.+.+.++..+++++|+++|++|+||||+|.|++++.   
T Consensus       275 ------------------------------~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~d~f~~---  316 (390)
T 1wdk_C          275 ------------------------------VAG-----VDPAIMGYGPVPATQKALKRAGLNMADIDFIELNEAFAA---  316 (390)
T ss_dssp             ------------------------------EEE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEECCSBHH---
T ss_pred             ------------------------------Eec-----cChhhcchhHHHHHHHHHHHcCCChhhCcEEEeccCCHH---
Confidence                                          111     122333456688999999999999999999999999874   


Q ss_pred             HHHHHHHHhhcCC-----CCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccc
Q psy5293         257 VIELKAIGSLFPA-----QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWK  331 (359)
Q Consensus       257 ~~E~~al~~~~~~-----~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~  331 (359)
                        |..++.+.|+.     .++++++.|.++|||+||+|++++++++++|+++                            
T Consensus       317 --~~~~~~~~lg~~~~~~~~vn~~gg~~~~GHp~gasG~~~~~~~~~~L~~~----------------------------  366 (390)
T 1wdk_C          317 --QALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGCSGARISGTLLNVMKQN----------------------------  366 (390)
T ss_dssp             --HHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHT----------------------------
T ss_pred             --HHHHHHHHcCCCCCCCCcCCCCcCcccccCCcchhHHHHHHHHHHHHhhc----------------------------
Confidence              44444455542     3578899999999999999999999999999932                            


Q ss_pred             cCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         332 TDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       332 ~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                        +.++++++..+.||.+.++||++.
T Consensus       367 --~~~~gl~~~~~ggG~~~a~~~~~~  390 (390)
T 1wdk_C          367 --GGTFGLSTMCIGLGQGIATVFERV  390 (390)
T ss_dssp             --TCSEEEEEEEETTTEEEEEEEECC
T ss_pred             --CCCEEEEEecccchheEEEEEEeC
Confidence              257889988888899999999873

>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A

Probab=99.95  E-value=3.2e-28  Score=237.02  Aligned_cols=231  Identities=19%  Similarity=0.233  Sum_probs=175.0

Q ss_pred             HHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHH--------------HH------
Q psy5293          24 PAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQL--------------SI------   80 (359)
Q Consensus        24 ~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~--------------~~------   80 (359)
                      ++.+++..+|+  ++|+++|+++| |++.||..|+++|++|++|++||+|+|.++...              .+      
T Consensus        95 ~a~~va~~lGl~~~~p~~~v~~aCaSg~~Al~~A~~~I~sG~~d~vLvgG~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~  174 (442)
T 2wu9_A           95 ECRMAAFYAGFPETVAVRTVNRQCSSGLQAVADVAAAIKAGFYDIGIGAGLESMTTNPMAWEGSVNPAVKKFAQAQNCLL  174 (442)
T ss_dssp             HHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTSCCCCCSCCCGGGGGCHHHHHTTS
T ss_pred             HHHHHHHHcCCCCCceEEEeCCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEeecCCCccccccccchhhhhccccccchh
Confidence            68899999999  78999999999 999999999999999999999999999865411              00      


Q ss_pred             -HHH----------------------Hh--------hccccccC--------C----------CCCCC------------
Q psy5293          81 -AAF----------------------CR--------VRALATQF--------N----------NEPAQ------------   99 (359)
Q Consensus        81 -~~~----------------------~~--------~~~l~~~~--------~----------~~~~~------------   99 (359)
                       ...                      ..        .|.+....        .          -+.++            
T Consensus       175 ~mg~~A~~~~~~~gisre~~~~~A~~s~~~A~~~p~ag~~~~ei~pv~~~~~~~~~~~~~~~~~~~De~~r~~~t~e~~~  254 (442)
T 2wu9_A          175 PMGVTSENVAQRFGVSRQEQDQAAVDSHRKAAAATAAGKFKDEIIPVKTKLVDPKTGDEKPITVSVDDGIRPTTTLASLG  254 (442)
T ss_dssp             CHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEECTTTCCEEEEEECSCTTCCTTCCHHHHH
T ss_pred             HHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcccccccccceeeccccccccccCceeeecccCcCCCCCHHHHh
Confidence             000                      00        01111000        0          00111            


Q ss_pred             CCCC-ccCCCCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhc
Q psy5293         100 ASRP-FDKRRDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTR  171 (359)
Q Consensus       100 ~~~~-fd~~~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~  171 (359)
                      .++| |++  +|++       ++||+++++|++.+.+.++|++++++|+|++                            
T Consensus       255 ~~rpvfd~--~G~vt~~n~s~~~DGAaavvL~s~e~A~~~g~~~~a~I~g~~----------------------------  304 (442)
T 2wu9_A          255 KLKPVFKK--DGTTTAGNSSQVSDGAGAVLLMKRSVAMQKGLPVLGVFRTFA----------------------------  304 (442)
T ss_dssp             TSCCSSCT--TCCCCGGGBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEE----------------------------
T ss_pred             cCCCccCC--CCCeechhcCCCCCceEEEEEeeHHHHHHcCCCceEEEEEEE----------------------------
Confidence            2345 664  5776       6999999999999999999999999999987                            


Q ss_pred             ccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCC
Q psy5293         172 ILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATS  251 (359)
Q Consensus       172 ~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~  251 (359)
                                                         ...+     .|...+.++..+++++|+++|++|+||||+|.|+++
T Consensus       305 -----------------------------------~~~~-----~p~~~~~~~~~A~~~Al~~AGl~~~DId~iE~h~af  344 (442)
T 2wu9_A          305 -----------------------------------AVGV-----DPAIMGIGPAVAIPAAVKAAGLELDDIDLFEINEAF  344 (442)
T ss_dssp             -----------------------------------EEEC-----CGGGGGGHHHHHHHHHHHHTTCCGGGCCEEEECCSB
T ss_pred             -----------------------------------EecC-----CchhcchHHHHHHHHHHHHcCCCHHHCCEEEEeCCC
Confidence                                               2111     233334577899999999999999999999999999


Q ss_pred             CCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccc
Q psy5293         252 TPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTE  329 (359)
Q Consensus       252 t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~  329 (359)
                      |.    .|+..+.. ++  ..++++++.+..+|||+||+|+.++++++++|+++.                         
T Consensus       345 t~----~~l~~~~~-lG~~~~~vN~~GG~~a~GHp~GAsG~~~~~~~v~~Lr~~~-------------------------  394 (442)
T 2wu9_A          345 AS----QFVYCRNK-LGLDPEKINVNGGAMAIGHPLGATGARCVATLLHEMKRRG-------------------------  394 (442)
T ss_dssp             HH----HHHHHHHH-HTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHHC-------------------------
T ss_pred             hH----HHHHHHHH-hCCCCCCcCCCccHhhcCCchhHHHHHHHHHHHHHHhccC-------------------------
Confidence            95    45555533 33  346777888888999999999999999999999532                         


Q ss_pred             cccCCccEEEE-eCcCcCcceeeEEEeecC
Q psy5293         330 WKTDGRRVALK-NSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       330 ~~~~~~~~~~~-~~~g~gG~~~~~il~~~~  358 (359)
                         ++.+++++ +++| ||.++++||++++
T Consensus       395 ---~~~~~glas~~~G-GG~~~a~v~~~~~  420 (442)
T 2wu9_A          395 ---KDCRFGVVSMCIG-TGMGAAAVFERGD  420 (442)
T ss_dssp             ---TTCCEEEEEEEET-TTEEEEEEEEECS
T ss_pred             ---CCCCEEEEEeecc-cchheEEEEEecc
Confidence               02689996 5577 8999999999874

>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens}

Probab=99.95  E-value=1e-27  Score=232.46  Aligned_cols=231  Identities=19%  Similarity=0.189  Sum_probs=180.3

Q ss_pred             HHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH---------H-----------
Q psy5293          24 PAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS---------I-----------   80 (359)
Q Consensus        24 ~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~---------~-----------   80 (359)
                      ++.+++..+|+  ++|+++|+++| |++.||..|+++|++|++|++||+|+|.++....         +           
T Consensus        94 ~a~~~a~~lGl~~~~p~~~v~~aCss~~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~  173 (418)
T 2iik_A           94 MARIAQFLSDIPETVPLSTVNRQCSSGLQAVASIAGGIRNGSYDIGMACGVESMSLADRGNPGNITSRLMEKEKARDCLI  173 (418)
T ss_dssp             HHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTCC-----CCCTTGGGCHHHHGGGS
T ss_pred             HHHHHHHHcCCCCCceEEEeCCCCHHHHHHHHHHHHHHHCCCCCEEEEeccccCccCCccCCcccchhhhcccccccccc
Confidence            57778899999  78999999999 9999999999999999999999999998765210         0           


Q ss_pred             -HHH---H-------------------------h--hccccccC-----------------CCCCCCCCCC---------
Q psy5293          81 -AAF---C-------------------------R--VRALATQF-----------------NNEPAQASRP---------  103 (359)
Q Consensus        81 -~~~---~-------------------------~--~~~l~~~~-----------------~~~~~~~~~~---------  103 (359)
                       ..+   .                         .  .+.+....                 .-++++.+||         
T Consensus       174 ~~g~~a~~~a~~~gitre~~~~~a~~s~~~A~~a~~~g~~~~ei~pv~~~~~~~~~~~~~~~~~~d~~~rp~~t~e~l~~  253 (418)
T 2iik_A          174 PMGITSENVAERFGISREKQDTFALASQQKAARAQSKGCFQAEIVPVTTTVHDDKGTKRSITVTQDEGIRPSTTMEGLAK  253 (418)
T ss_dssp             CHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEEEECTTSCEEEEEECSCTTCCTTCCHHHHHH
T ss_pred             cHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHhChhcCccccceeeeeeccccccCcccceeeecccCcCCCCCHHHHhh
Confidence             000   0                         0  11111100                 0113567787         


Q ss_pred             ----ccCCC-----CCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293         104 ----FDKRR-----DGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus       104 ----fd~~~-----~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                          |+.++     +++.++||+++++|++.+.+.++|.+|+++|.+++                               
T Consensus       254 ~~~vfd~~~~~t~~d~~~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~-------------------------------  302 (418)
T 2iik_A          254 LKPAFKKDGSTTAGNSSQVSDGAAAILLARRSKAEELGLPILGVLRSYA-------------------------------  302 (418)
T ss_dssp             CCCSSSTTCCCCSTTBCCCEEEEEEEEEEEHHHHHHHTCCCCEEEEEEE-------------------------------
T ss_pred             CCCcccCCCceeeccccCCCCCceEEEEecHHHHHhcCCCceEEEEEEE-------------------------------
Confidence                98775     89999999999999999999999999999999876                               


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCc
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPL  254 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~  254 (359)
                                                      ..+     ..|+..+.++..+++++|+++|++|+||||+|.|++++ .
T Consensus       303 --------------------------------~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~dId~vE~h~af~-~  344 (418)
T 2iik_A          303 --------------------------------VVG-----VPPDIMGIGPAYAIPVALQKAGLTVSDVDIFEINEAFA-S  344 (418)
T ss_dssp             --------------------------------EEE-----CCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEEECCSBH-H
T ss_pred             --------------------------------ecc-----CCchhcchhHHHHHHHHHHHcCCCHHHCCeeeeeccch-H
Confidence                                            111     12333445778899999999999999999999999877 5


Q ss_pred             ccHHHHHHHHhhcCCCCceecccc--cccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCccccccc
Q psy5293         255 GDVIELKAIGSLFPAQRLMVSSTK--GAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKT  332 (359)
Q Consensus       255 ~d~~E~~al~~~~~~~~~~v~~~k--~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (359)
                      .|..|+++|+..    ..+|+..+  ..+|||+||+|+.++++++++|++                       +      
T Consensus       345 ~~~~~~~~lg~~----~~~vN~~GG~~a~GHp~GAsG~~~~~~~~~~L~~-----------------------~------  391 (418)
T 2iik_A          345 QAAYCVEKLRLP----PEKVNPLGGAVALGHPLGCTGARQVITLLNELKR-----------------------R------  391 (418)
T ss_dssp             HHHHHHHHHTCC----GGGBCTTCCHHHHCCCHHHHHHHHHHHHHHHHHH-----------------------H------
T ss_pred             HHHHHHHHcCCC----ccccCCCCCeeeecCChhhhHHHHHHHHHHHHHh-----------------------c------
Confidence            788898888653    23555555  568999999999999999999982                       1      


Q ss_pred             CCcc-EEEEeCcCcCcceeeEEEeec
Q psy5293         333 DGRR-VALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       333 ~~~~-~~~~~~~g~gG~~~~~il~~~  357 (359)
                       +.| +++++..+.||...++|||++
T Consensus       392 -~~~~~gl~~~c~ggG~g~a~~~e~~  416 (418)
T 2iik_A          392 -GKRAYGVVSMCIGTGMGAAAVFEYP  416 (418)
T ss_dssp             -TSCEEEEEEEEETTTEEEEEEEEEC
T ss_pred             -CCCeeeEEEEeeccchhheEEEecc
Confidence             135 889998888899999999986

>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ...

Probab=99.95  E-value=4e-28  Score=233.82  Aligned_cols=228  Identities=22%  Similarity=0.339  Sum_probs=175.1

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH----H--------HHH----
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI----A--------AFC----   84 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~----~--------~~~----   84 (359)
                      ++.++++.+|++  +|+++|+++| |++.||..|+++|++|++|++||+|+|++......    .        .+.    
T Consensus        66 ~a~~ia~~lgl~~~~p~~~v~~aCaSgl~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~  145 (392)
T 2vu1_A           66 PARQAAMKAGVPQEATAWGMNQLCGSGLRAVALGMQQIATGDASIIVAGGMESMSMAPHCAHLRGGVKMGDFKMIDTMIK  145 (392)
T ss_dssp             HHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTCCEEECCTTCCCSSCEEEEEHHHH
T ss_pred             HHHHHHHHcCCCCCceEEEecccchHHHHHHHHHHHHHHCCCCCEEEEEEEeccCCCccccccccccccCcccccchhhh
Confidence            699999999998  8999999999 99999999999999999999999999986541110    0        000    


Q ss_pred             ----------hhccc----------cc---------------------cCCCC--CC-----CCCCCccCC---------
Q psy5293          85 ----------RVRAL----------AT---------------------QFNNE--PA-----QASRPFDKR---------  107 (359)
Q Consensus        85 ----------~~~~l----------~~---------------------~~~~~--~~-----~~~~~fd~~---------  107 (359)
                                .++.+          ++                     .+.++  |.     ..++|||.+         
T Consensus       146 ~~~~~~~~~~~~~~~a~~~~~~~g~s~e~~~~~a~~s~~~A~~~~~ag~~~~ei~p~~~~~~~~~~~f~~d~~~r~~~t~  225 (392)
T 2vu1_A          146 DGLTDAFYGYHMGTTAENVAKQWQLSRDEQDAFAVASQNKAEAAQKDGRFKDEIVPFIVKGRKGDITVDADEYIRHGATL  225 (392)
T ss_dssp             HHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEECCTTCCEEECSCSSCCTTCCH
T ss_pred             cccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeeeeeeccCCCceeeccccccCCCCCH
Confidence                      01111          10                     00110  10     125778877         


Q ss_pred             -----------CCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchh
Q psy5293         108 -----------RDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFV  169 (359)
Q Consensus       108 -----------~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~  169 (359)
                                 ++|++       ++||+++++|++.+.+.+++++++++|.+++                          
T Consensus       226 e~~~~~~~v~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~--------------------------  279 (392)
T 2vu1_A          226 DSMAKLRPAFDKEGTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLGRIVSWA--------------------------  279 (392)
T ss_dssp             HHHHTCCCSSCTTCCCCSSSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEE--------------------------
T ss_pred             HHHhcCCCccCCCCCeeCcccCCccChhheeeEecHHHHHhcCCCccEEEEEEE--------------------------
Confidence                       67999       9999999999999999999999999999986                          


Q ss_pred             hcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q psy5293         170 TRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHA  249 (359)
Q Consensus       170 ~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~  249 (359)
                                                           ...     ..|.+.+.++.++++++|+++|++|+|||++|.|+
T Consensus       280 -------------------------------------~~~-----~~p~~~~~~~~~a~~~al~~agl~~~dId~ie~~d  317 (392)
T 2vu1_A          280 -------------------------------------TVG-----VDPKVMGTGPIPASRKALERAGWKIGDLDLVEANE  317 (392)
T ss_dssp             -------------------------------------EEE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred             -------------------------------------Eee-----cChhhcchhHHHHHHHHHHHcCCCHHHcCEEEecc
Confidence                                                 111     12333345678899999999999999999999886


Q ss_pred             CCCCcccHHHHHH--HHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCC
Q psy5293         250 TSTPLGDVIELKA--IGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT  325 (359)
Q Consensus       250 ~~t~~~d~~E~~a--l~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~  325 (359)
                      .++       ..+  +.+.|+  ..++++++.|.++|||+||+|+.++++++++|+++                      
T Consensus       318 ~f~-------~~~l~~~~~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~~~----------------------  368 (392)
T 2vu1_A          318 AFA-------AQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGARILNTLLFEMKRR----------------------  368 (392)
T ss_dssp             SBH-------HHHHHHHHHHCCCGGGBSTTCCHHHHCCCGGGHHHHHHHHHHHHHHHH----------------------
T ss_pred             ccH-------HHHHHHHHHcCCCcccCCCCccHhhhCCChhhHHHHHHHHHHHHHhcc----------------------
Confidence            544       333  233444  34789999999999999999999999999999831                      


Q ss_pred             cccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                              +.++++++....||++.++||++
T Consensus       369 --------~~~~gl~~~~~ggG~~~a~~~e~  391 (392)
T 2vu1_A          369 --------GARKGLATLCIGGGMGVAMCIES  391 (392)
T ss_dssp             --------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred             --------CCCEEEEEEecccchheEEEEEe
Confidence                    25789987765589999999987

>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A

Probab=99.95  E-value=2.8e-27  Score=227.67  Aligned_cols=230  Identities=19%  Similarity=0.199  Sum_probs=170.3

Q ss_pred             ChHHHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH------------HH--HH
Q psy5293          21 NMVPAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS------------IA--AF   83 (359)
Q Consensus        21 ~~~~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~------------~~--~~   83 (359)
                      +. ++.+++..+|+  ++|+++|+++| |++.||..|+++|++|++|++||+|+|.++....            +.  .+
T Consensus        76 ~~-~a~~va~~lGl~~~~p~~~v~~aCasg~~Al~~A~~~I~~G~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~g~  154 (393)
T 1afw_A           76 AT-EHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTNNYKNVNPLGMISSEELQKNRE  154 (393)
T ss_dssp             HH-HHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHHHGGGSCTTCSCCCHHHHHCTT
T ss_pred             Ch-HHHHHHHHcCCCCCceEEEEcCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEEecCCCcccccccccccchhhhhccc
Confidence            44 69999999999  78999999999 9999999999999999999999999997543111            00  00


Q ss_pred             -----Hhhcccc---------------------------c----cCC-------------CCCCCC------------CC
Q psy5293          84 -----CRVRALA---------------------------T----QFN-------------NEPAQA------------SR  102 (359)
Q Consensus        84 -----~~~~~l~---------------------------~----~~~-------------~~~~~~------------~~  102 (359)
                           ..++.++                           +    .+.             -++++.            ++
T Consensus       155 ~~~~~~~~~~~a~~~~~~~g~sre~~~~~a~~s~~~A~~~~~ag~f~~ei~P~~~~~~~~~~~d~~~r~~~t~e~~~~~r  234 (393)
T 1afw_A          155 AKKCLIPMGITNENVAANFKISRKDQDEFAANSYQKAYKAKNEGLFEDEILPIKLPDGSICQSDEGPRPNVTAESLSSIR  234 (393)
T ss_dssp             GGGGGSCHHHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHTTSSTTTBCCEECTTSCEECSCSSCCSCCCHHHHHHCC
T ss_pred             ccccchhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHhhHhcCCccceeeeeeccCCceeccccccCCCCCHHHHhcCC
Confidence                 0011110                           0    000             012222            34


Q ss_pred             C-ccCCCCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293         103 P-FDKRRDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus       103 ~-fd~~~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                      | ||.++ |++       ++||+++++|++.+.+.++|++++++|+|++                               
T Consensus       235 pvf~~~~-G~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~i~g~~-------------------------------  282 (393)
T 1afw_A          235 PAFIKDR-GTTTAGNASQVSDGVAGVLLARRSVANQLNLPVLGRYIDFQ-------------------------------  282 (393)
T ss_dssp             BSCC----CCCBTTTBCCBEEEEEEEEEEEHHHHHHTTCCCCEEEEEEE-------------------------------
T ss_pred             CcccCCC-CCeechhcCcccchhheeeEecHHHHHHcCCCccEEEEEEE-------------------------------
Confidence            5 77655 766       7999999999999999999999999999987                               


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCc
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPL  254 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~  254 (359)
                                                      ...+     .|+..+.++.++++++|+++|++|+||||+|.|++++. 
T Consensus       283 --------------------------------~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~h~~ft~-  324 (393)
T 1afw_A          283 --------------------------------TVGV-----PPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFAA-  324 (393)
T ss_dssp             --------------------------------EEEC-----CGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-
T ss_pred             --------------------------------Eecc-----ChhhcchhHHHHHHHHHHHcCCCHHHCCEEEEeccCHH-
Confidence                                            2222     12333457789999999999999999999999999984 


Q ss_pred             ccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCccccccc
Q psy5293         255 GDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKT  332 (359)
Q Consensus       255 ~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (359)
                         .|+..+.. ++  ..++++++.+..+|||+||+|+.+++++++||++                       +.     
T Consensus       325 ---~~l~~~~~-lg~~~~~vn~~Gg~~a~GHp~gAsG~~~~~~~~~~L~~-----------------------~~-----  372 (393)
T 1afw_A          325 ---QALYCIHK-LGIDLNKVNPRGGAIALGHPLGCTGARQVATILRELKK-----------------------DQ-----  372 (393)
T ss_dssp             ---HHHHHHHH-HTCCGGGBSTTCCHHHHCBCTTTHHHHHHHHHHHHSCT-----------------------TC-----
T ss_pred             ---HHHHHHHH-hCCCCcCcCCCCChhhcCCchhhHHHHHHHHHHHHHhh-----------------------cC-----
Confidence               44444433 33  3467788888889999999999999999999982                       11     


Q ss_pred             CCccEEEEeCcCcCcceeeEEEeec
Q psy5293         333 DGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       333 ~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                        .  ++++..+-||...++||+++
T Consensus       373 --~--gl~~~c~ggg~g~a~~~~~~  393 (393)
T 1afw_A          373 --I--GVVSMCIGTGMGAAAIFIKE  393 (393)
T ss_dssp             --E--EEEEEEETTTEEEEEEEEEC
T ss_pred             --C--cEEEEeecccceEEEEEEeC
Confidence              1  66666666788889999874

>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A*

Probab=99.95  E-value=3.2e-27  Score=227.69  Aligned_cols=229  Identities=21%  Similarity=0.289  Sum_probs=169.8

Q ss_pred             ChHHHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHH------------------
Q psy5293          21 NMVPAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLS------------------   79 (359)
Q Consensus        21 ~~~~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~------------------   79 (359)
                      .. ++.++++.+|+  ++|+++|+++| |++.||..|+++|++|++|++||+|+|.+.....                  
T Consensus        69 ~~-~a~~va~~lgl~~~~p~~~v~~aCaS~~~Al~~A~~~I~~G~~d~vlvgG~e~~s~~~~~~~~~~~~~~~~~~~~~~  147 (395)
T 2ib8_A           69 QA-PTRQAVLGAGLPISTPCTTINKVCASGMKAIMMASQSLMCGHQDVMVAGGMESMSNVPYVMNRGSTPYGGVKLEDLI  147 (395)
T ss_dssp             SC-HHHHHHHHTTCCTTCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGCCEEECSSBCCTTCEEEEEHH
T ss_pred             ch-HHHHHHHHcCCCCCceEEEecccccHHHHHHHHHHHHHHCCCCCEEEEEeeecccCCcccccccccccccccccccc
Confidence            34 69999999999  79999999999 9999999999999999999999999997543110                  


Q ss_pred             -HHH-----------------HHhhccccc--------------------cCCC-----------------CCCCCCCC-
Q psy5293          80 -IAA-----------------FCRVRALAT--------------------QFNN-----------------EPAQASRP-  103 (359)
Q Consensus        80 -~~~-----------------~~~~~~l~~--------------------~~~~-----------------~~~~~~~~-  103 (359)
                       +..                 ....+....                    .+.+                 +.++.+++ 
T Consensus       148 ~~~~~~~~~~~~~m~~~a~~~~~~~g~sre~~~~~A~~s~~~a~~a~~~~~f~~ei~p~~~~~~~~p~~~~~~D~~~r~~  227 (395)
T 2ib8_A          148 VKDGLTDVYNKIHMGSCAENTAKKLNIARNEQDAYAINSYTRSKAAWEAGKFGNEVIPVTVTVKGQPDVVVKEDEEYKRV  227 (395)
T ss_dssp             HHHTTEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEECCTTSCCEEECSCSGGGSC
T ss_pred             cccccccccccchHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHhcccccCcccceeeeeecccCCcceeeccccccccC
Confidence             000                 011110000                    0000                 01112222 


Q ss_pred             -ccC---------CCCCce-------ecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCc
Q psy5293         104 -FDK---------RRDGFV-------MGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSP  166 (359)
Q Consensus       104 -fd~---------~~~G~~-------~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p  166 (359)
                       |+.         +++|++       ++||+++++|++.+.+.+++++++++|+|++                       
T Consensus       228 ~~~~l~~l~~~f~~~~g~vt~~~~~~~~dGAaavvL~s~~~A~~~g~~~~a~I~g~~-----------------------  284 (395)
T 2ib8_A          228 DFSKVPKLKTVFQKENGTVTAANASTLNDGAAALVLMTADAAKRLNVTPLARIVAFA-----------------------  284 (395)
T ss_dssp             CTTTGGGSCCTTCSSSCCCCTTTBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEE-----------------------
T ss_pred             CHHHHhcCCccccCCCCCcccccCCccccceeEEEEecHHHHHhcCCCccEEEEEEE-----------------------
Confidence             444         557999       9999999999999999999999999999986                       


Q ss_pred             chhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         167 YFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       167 ~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                              ...     ..|...+.++..+++++|+++|++|+||||+|
T Consensus       285 ----------------------------------------~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~dId~ie  319 (395)
T 2ib8_A          285 ----------------------------------------DAA-----VEPIDFPIAPVYAASMVLKDVGLKKEDIAMWE  319 (395)
T ss_dssp             ----------------------------------------EEE-----CCGGGGGGHHHHHHHHHHHHHTCCGGGEEEEE
T ss_pred             ----------------------------------------Eec-----cChhhccccHHHHHHHHHHHcCCCHHHcCEEE
Confidence                                                    110     22333345678999999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhh--cC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCC
Q psy5293         247 AHATSTPLGDVIELKAIGSL--FP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYE  322 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~--~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~  322 (359)
                      .|+.+       |..++..+  |+  ..++++++.|.++|||+||||+.+++++++||+                     
T Consensus       320 ~~D~f-------~~~~l~~~e~lg~~~~~vn~~gg~~~~GHp~gAsG~~~~~~~~~~L~---------------------  371 (395)
T 2ib8_A          320 VNEAF-------SLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTHALK---------------------  371 (395)
T ss_dssp             ECCSB-------HHHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHSC---------------------
T ss_pred             Ecccc-------HHHHHHHHHHcCCCccccCCCcchhhcCCChhHHHHHHHHHHHHHHh---------------------
Confidence            77554       44444443  44  347899999999999999999999999999998                     


Q ss_pred             CCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         323 CPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       323 ~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                        .         .++++++...-||...++|||+.
T Consensus       372 --~---------~~~gl~~~~~ggG~g~a~~~~~~  395 (395)
T 2ib8_A          372 --Q---------GEYGLASICNGGGGASAMLIQKL  395 (395)
T ss_dssp             --T---------TCEEEEEEEETTTEEEEEEEEEC
T ss_pred             --h---------CCceEEEEecccCHhheEEEEcC
Confidence              2         14566655555678889999873

>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile}

Probab=99.94  E-value=1.6e-26  Score=222.68  Aligned_cols=230  Identities=22%  Similarity=0.298  Sum_probs=175.9

Q ss_pred             HHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH--------------------
Q psy5293          24 PAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI--------------------   80 (359)
Q Consensus        24 ~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~--------------------   80 (359)
                      ++.+++..+|+  ++|+++|+++| |++.||..|+++|++|++|.+||+|+|.+......                    
T Consensus        70 ~a~~v~~~lGl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vLv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~  149 (396)
T 4dd5_A           70 IARQIALGAGIPVEKPAMTINIVCGSGLRSVSMASQLIALGDADIMLVGGAENMSMSPYLVPSARYGARMGDAAFVDSMI  149 (396)
T ss_dssp             HHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEESTTCCEECTTTTTCCCSSCCCCEEHHH
T ss_pred             HHHHHHHHcCCCCCceEEEeccccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccCCcccccccccccccCcccccchhh
Confidence            59999999999  47999999999 99999999999999999999999999987652100                    


Q ss_pred             ----------------------------------HHHHh--------hccccccC------------CCCCCCCCCC---
Q psy5293          81 ----------------------------------AAFCR--------VRALATQF------------NNEPAQASRP---  103 (359)
Q Consensus        81 ----------------------------------~~~~~--------~~~l~~~~------------~~~~~~~~~~---  103 (359)
                                                        .....        .|.+....            .-++++..|+   
T Consensus       150 ~~~~~~~~~~~~~~~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~f~~ei~pv~~~~~~~~~~~~~d~~~r~~~t  229 (396)
T 4dd5_A          150 KDGLSDIFNNYHMGITAENIAEQWNITREEQDELALASQNKAEKAQAEGKFDEEIVPVVIKGRKGDTVVDKDEYIKPGTT  229 (396)
T ss_dssp             HHTSEETTTTEEHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEC----CEEECSCSCCCTTCC
T ss_pred             hcccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHHcCCcccceeeeeeccCCCceeecCcccccCCCC
Confidence                                              00000        00010000            0013333322   


Q ss_pred             ----------ccC-----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcch
Q psy5293         104 ----------FDK-----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYF  168 (359)
Q Consensus       104 ----------fd~-----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~  168 (359)
                                |++     ..+...++||+++++|++.+.+.+++++++++|++++                         
T Consensus       230 ~e~l~~~~~v~~p~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~I~g~~-------------------------  284 (396)
T 4dd5_A          230 MEKLAKLRPAFKKDGTVTAGNASGINDGAAMLVVMAKEKAEELGIEPLATIVSYG-------------------------  284 (396)
T ss_dssp             HHHHHHCCBSSSTTCSCBTTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEE-------------------------
T ss_pred             HHHHhhCCCccCCCCCeecCCCCCcCcceeEEEEeeHHHHHHCCCCceEEEEEEE-------------------------
Confidence                      432     2345568999999999999999999999999999886                         


Q ss_pred             hhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEec
Q psy5293         169 VTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAH  248 (359)
Q Consensus       169 ~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h  248 (359)
                                                            ...     ..|++.+.++..+++++|+++|++|+||||+|.|
T Consensus       285 --------------------------------------~~~-----~~p~~~~~~~~~a~~~al~~Agl~~~dId~ve~~  321 (396)
T 4dd5_A          285 --------------------------------------TAG-----VDPKIMGYGPVPATKKALEAANMTIEDIDLVEAN  321 (396)
T ss_dssp             --------------------------------------EEE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred             --------------------------------------Eec-----CCCCcccHHHHHHHHHHHHHcCCCHHHcCEEEec
Confidence                                                  111     1233444567889999999999999999999999


Q ss_pred             cCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc
Q psy5293         249 ATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTA  326 (359)
Q Consensus       249 ~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~  326 (359)
                      ++++     .|..++.+.++  ..++++++.|.++|||++|||+.++++++++|+++                       
T Consensus       322 d~f~-----~~~~~~~~~lg~~~~~~n~~gg~~~~GH~~gasG~~~~~~~~~~L~~~-----------------------  373 (396)
T 4dd5_A          322 EAFA-----AQSVAVIRDLNIDMNKVNVNGGAIAIGHPIGCSGARILTTLLYEMKRR-----------------------  373 (396)
T ss_dssp             CSBH-----HHHHHHHHHHTCCTTSBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHHH-----------------------
T ss_pred             ChHH-----HHHHHHHHHhCCCCCccCCCCchhhccCcHHHHHHHHHHHHHHHHHhc-----------------------
Confidence            8864     35555555555  45789999999999999999999999999999931                       


Q ss_pred             ccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         327 VTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                             +.|+++++..+.||+..++|||+
T Consensus       374 -------~~~~gl~~~c~ggG~g~a~~~e~  396 (396)
T 4dd5_A          374 -------DAKTGLATLCIGGGMGTTLIVKR  396 (396)
T ss_dssp             -------TCSEEEEEEEETTTEEEEEEEEC
T ss_pred             -------CCCeEEEEEcccCCceeEEEEeC
Confidence                   26899999999999999999985

>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis}

Probab=99.94  E-value=5e-27  Score=226.20  Aligned_cols=231  Identities=22%  Similarity=0.275  Sum_probs=177.7

Q ss_pred             HHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH--------------------
Q psy5293          24 PAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI--------------------   80 (359)
Q Consensus        24 ~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~--------------------   80 (359)
                      ++.+++..+|+  ++|+++|+++| |++.||..|+++|++|++|++||+|+|.+......                    
T Consensus        68 ~a~~i~~~lGl~~~~p~~~v~~aCss~~~al~~A~~~I~~G~~~~vlv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~  147 (394)
T 3ss6_A           68 TARTAALAAGFPDTVTGYTIQRQCSSGMQAIMSAAMQIQLGVSEVVVAGGVEAMSSSPYALKQHRWGQRLQHGEIRDTVW  147 (394)
T ss_dssp             HHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHHHHTSCSEEEEEEEEECTTCCEEESSTTTCCCSSCCCCEEHHH
T ss_pred             HHHHHHHHcCCCCCceEEEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEhhccCCcccccccccccccCCcccccccc
Confidence            58999999999  57999999999 99999999999999999999999999987642110                    


Q ss_pred             ---------------------------------HHHHhh--------cccccc------------CCCCCCCCCCC----
Q psy5293          81 ---------------------------------AAFCRV--------RALATQ------------FNNEPAQASRP----  103 (359)
Q Consensus        81 ---------------------------------~~~~~~--------~~l~~~------------~~~~~~~~~~~----  103 (359)
                                                       ......        |.+...            ...+|++.+|+    
T Consensus       148 ~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~ag~f~~ei~p~~~~~~~~~~~~~~d~~~R~~~t~  227 (394)
T 3ss6_A          148 EVLEDPIHHIMMGETAENLVEQYEITREEQDEVALRSHTLALKAIESGYFDDQIVPITIKERRKEVVFSKDEHPRADITA  227 (394)
T ss_dssp             HHTBCTTTCCBHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECSSCEEEECSCCCCCTTCCH
T ss_pred             cccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCccceeEeEEeccCCCceeecccccccCCCCH
Confidence                                             000000        000000            00124444443    


Q ss_pred             ---------ccCC-----CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchh
Q psy5293         104 ---------FDKR-----RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFV  169 (359)
Q Consensus       104 ---------fd~~-----~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~  169 (359)
                               |+++     .++..++||+++++|++.+.+.+++++++++|.+++.                         
T Consensus       228 e~~~~~~pvf~~~g~~t~~~~~~~~dGaaavvL~~~~~A~~~g~~~~a~I~g~~~-------------------------  282 (394)
T 3ss6_A          228 EKLAGLKPAFRKDGSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLARIVGYSV-------------------------  282 (394)
T ss_dssp             HHHHTCCBSSSTTCCCBSTTBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEE-------------------------
T ss_pred             HHHhhCCCccCCCCceecCccCCcccceeEEEeccHHHHHHCCCCceEEEEEEEE-------------------------
Confidence                     5532     4556688999999999999999999999999999861                         


Q ss_pred             hcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q psy5293         170 TRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHA  249 (359)
Q Consensus       170 ~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~  249 (359)
                                                            ..     ..|.+.+.++.++++++|+++|++|+||||+|.|+
T Consensus       283 --------------------------------------~~-----~~p~~~~~~~~~a~~~al~~agl~~~dId~ve~~d  319 (394)
T 3ss6_A          283 --------------------------------------AG-----VDPKIMGIGPAPAIRKGLEKVDWSLEDADLLEINE  319 (394)
T ss_dssp             --------------------------------------EE-----CCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECC
T ss_pred             --------------------------------------ec-----CCCccchHHHHHHHHHHHHHcCCCHHHcCEEEeCC
Confidence                                                  10     12333345568899999999999999999999998


Q ss_pred             CCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc
Q psy5293         250 TSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAV  327 (359)
Q Consensus       250 ~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~  327 (359)
                      .++     .|..++.+.++  ..++++++.|.++|||.||||+.++++++++|++                       + 
T Consensus       320 ~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~GH~~gasG~~~~~~~~~~L~~-----------------------~-  370 (394)
T 3ss6_A          320 AFA-----AQYLAVEKELDLDREKVNVNGSGVGLGHPIGCTGARITVSLIHELKR-----------------------R-  370 (394)
T ss_dssp             SBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH-----------------------H-
T ss_pred             chH-----HHHHHHHHHhCCCCCCCCCCcchHhhCCcHHHHHHHHHHHHHHHHHh-----------------------c-
Confidence            764     46666666665  3468899999999999999999999999999983                       1 


Q ss_pred             cccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         328 TEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                            +.|+++++..+.||...++|||+.
T Consensus       371 ------~~~~gl~~~c~ggG~g~a~~~e~~  394 (394)
T 3ss6_A          371 ------GLEKGIASLCVGGGIGVALFIEAL  394 (394)
T ss_dssp             ------TCCEEEEEEEETTTEEEEEEEEEC
T ss_pred             ------CCCEEEEEEccCcCceeEEEEEcC
Confidence                  268999998888999999999974

>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium}

Probab=99.94  E-value=2e-26  Score=221.33  Aligned_cols=235  Identities=22%  Similarity=0.217  Sum_probs=173.0

Q ss_pred             HHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHH--------------------
Q psy5293          24 PAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSI--------------------   80 (359)
Q Consensus        24 ~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~--------------------   80 (359)
                      ++.+++..+|+  ++|+++|+++| |++.||..|+++|++|++|++||+|+|+++.....                    
T Consensus        68 ~a~~~~~~~Gl~~~~p~~~v~~aCss~l~Al~~A~~~I~sG~~d~vLv~G~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~  147 (387)
T 3goa_A           68 IARNAALLAEIPHSVPAVTVNRLCGSSMQALHDAARMIMTGDAQVCLVGGVEHMGHVPMSHGVDFHPGLSRNVAKAAGMM  147 (387)
T ss_dssp             HHHHHHHHTTCCTTSCCEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECTTTSCTTTTBCCCTTCC-------CCC
T ss_pred             HHHHHHHHcCCCCCCcEeEecCcchHHHHHHHHHHHHHhCCCCCEEEEEEEecCCCCccccccCcCcccccccccccccH
Confidence            58899999999  57999999999 99999999999999999999999999987643110                    


Q ss_pred             ---------------------HHHH--------hhccccccC-------------CCCCCCCCCC-------------cc
Q psy5293          81 ---------------------AAFC--------RVRALATQF-------------NNEPAQASRP-------------FD  105 (359)
Q Consensus        81 ---------------------~~~~--------~~~~l~~~~-------------~~~~~~~~~~-------------fd  105 (359)
                                           ....        ..|.+....             .-++++.+|+             |+
T Consensus       148 g~~a~~~~~~~g~tre~~~~~a~~s~~~A~~a~~~g~f~~ei~p~~~~~~~~~~~~~~~d~~~r~~~t~e~l~~~~p~f~  227 (387)
T 3goa_A          148 GLTAEMLSRLHGISREMQDQFAARSHARAWAATQSGAFKTEIIPTGGHDADGVLKQFNYDEVIRPETTVEALSTLRPAFD  227 (387)
T ss_dssp             HHHHHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTTTTBCCEEEECTTSCEEEECSCTTCCTTCCHHHHTTSCCSSC
T ss_pred             HHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHhHhcCCcccceeeeeeccccCcccccccccccCCCCCHHHHhcCCCccc
Confidence                                 0000        000111000             0012333332             55


Q ss_pred             C------CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchh
Q psy5293         106 K------RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAG  179 (359)
Q Consensus       106 ~------~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~  179 (359)
                      +      ..++..++||+++++|++.+.+.+++++++++|++++                                    
T Consensus       228 ~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~------------------------------------  271 (387)
T 3goa_A          228 PVSGTVTAGTSSALSDGAAAMLVMSESRARELGLKPRARIRSMA------------------------------------  271 (387)
T ss_dssp             TTTCCCCGGGBCCCEEEEEEEEEEEHHHHHHTTCCCCEEEEEEE------------------------------------
T ss_pred             CCCCceecccCCCcCccEEEEEEecHHHHHHcCCCccEEEEEEE------------------------------------
Confidence            4      1355668999999999999999999999999999886                                    


Q ss_pred             hhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHH
Q psy5293         180 QISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIE  259 (359)
Q Consensus       180 ~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E  259 (359)
                                                 ...+     .|...+.++.++++++|+++|++|+||||+|.|++++. .+...
T Consensus       272 ---------------------------~~~~-----~~~~~~~~~~~a~~~al~~agl~~~did~ve~h~~f~~-~~~~~  318 (387)
T 3goa_A          272 ---------------------------VVGC-----DPSIMGYGPVPASKLALKKAGLSASDIDVFEMNEAFAA-QILPC  318 (387)
T ss_dssp             ---------------------------EEEC-----CTTSTTCTHHHHHHHHHHHHTCCGGGCSEEEECCSBHH-HHHHH
T ss_pred             ---------------------------EcCC-----CCCcchHHHHHHHHHHHHHcCCCHHHcCEEEEeCcchH-HHHHH
Confidence                                       2111     12223345688999999999999999999999999884 22223


Q ss_pred             HHHHHhhc-CCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEE
Q psy5293         260 LKAIGSLF-PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVA  338 (359)
Q Consensus       260 ~~al~~~~-~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (359)
                      .+.++.+. +..++++++.+..+|||+||+|+.+++++++||++                              .+.|++
T Consensus       319 ~~~lg~~~~~~~~vn~~gg~~~~GH~~gasG~~~~~~~~~~L~~------------------------------~~~~~g  368 (387)
T 3goa_A          319 IKDLGLMEQIDEKINLNGGAIALGHPLGCSGARISTTLINLMER------------------------------KDAQFG  368 (387)
T ss_dssp             HHHTTCGGGHHHHBSTTCCHHHHCCCHHHHHHHHHHHHHHHHHH------------------------------TTCSEE
T ss_pred             HHHhCCCcCCCccCCCCCchhcccCCHHHHHHHHHHHHHHHHHh------------------------------cCCCEE
Confidence            33332221 12357788888899999999999999999999993                              126899


Q ss_pred             EEeCcCcCcceeeEEEeec
Q psy5293         339 LKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       339 ~~~~~g~gG~~~~~il~~~  357 (359)
                      +++....||...++|||+.
T Consensus       369 l~~~c~ggG~g~a~~~e~~  387 (387)
T 3goa_A          369 LATMCIGLGQGIATVFERV  387 (387)
T ss_dssp             EEEEEETTTEEEEEEEECC
T ss_pred             EEEeccCcCceEEEEEEeC
Confidence            9988777889999999873

>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile}

Probab=99.93  E-value=6.1e-26  Score=218.76  Aligned_cols=230  Identities=24%  Similarity=0.287  Sum_probs=175.4

Q ss_pred             HHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHH------------------
Q psy5293          24 PAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAA------------------   82 (359)
Q Consensus        24 ~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~------------------   82 (359)
                      ++.+++..+|+  ++|+++|+++| |++.||..|+++|++|++|++||+|+|.+........                  
T Consensus        68 ~a~~~~~~lGl~~~~p~~~v~~~Css~~~al~~A~~~I~~G~~~~vlv~g~e~~s~~~~~~~~~~~~~~~~~~~~~~~~~  147 (395)
T 4e1l_A           68 VARQIAINAGIPNSVPSYTVNKLCGSGLKSVQLAAQSITSGENDVVIAGGTENMSQAPYIVPTARFGSKMGNITMVDSML  147 (395)
T ss_dssp             HHHHHHHHTTCCTTSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTHHHHSBHHHHEEESCCC------C
T ss_pred             HHHHHHHHcCCCCCceEEEccccchHHHHHHHHHHHHHhCCCCCEEEEEEEecccCCcccccccccccccCccccchhhc
Confidence            58999999999  57999999999 9999999999999999999999999999876432110                  


Q ss_pred             ------------------------------------HHhh--------cccccc-------------CCCCCCCCCCC--
Q psy5293          83 ------------------------------------FCRV--------RALATQ-------------FNNEPAQASRP--  103 (359)
Q Consensus        83 ------------------------------------~~~~--------~~l~~~-------------~~~~~~~~~~~--  103 (359)
                                                          ....        |.+...             ..-+|++..|+  
T Consensus       148 ~~~~~~~~~~~~~g~~a~~~~~~~g~tre~~~~~a~~s~~~a~~a~~~g~~~~ei~pv~~~~~~g~~~~~~~d~~~r~~~  227 (395)
T 4e1l_A          148 TDGLIDAFNQYHMGITAENIATKFEFTREMQDKLALESQNKAENAIKNNRFKEEIVPVDVLIRRGKIETIDKDEYPKLGM  227 (395)
T ss_dssp             CTTEEEETTHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEEEEEETTEEEEECSCSCCCTTC
T ss_pred             ccccccccccchHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeEeccCCCcceEECCccccCCCC
Confidence                                                0000        000000             00023333332  


Q ss_pred             -----------ccC-----CCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcc
Q psy5293         104 -----------FDK-----RRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPY  167 (359)
Q Consensus       104 -----------fd~-----~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~  167 (359)
                                 |++     ..+...++||+++++|++.+.+.+++++++++|.+++.                       
T Consensus       228 t~e~l~~~~~v~~~~g~~t~~~~~~~~dGaaavvL~s~~~A~~~g~~~~a~i~g~~~-----------------------  284 (395)
T 4e1l_A          228 TFEGLSKLKPAFKKDGTVTAGNASGINDGAAMLILMSQQKADELGIRPLAKIKSYAS-----------------------  284 (395)
T ss_dssp             CHHHHHHCCBSSSTTCSCBTTSBCCCEEEEEEEEEEEHHHHHHHTCCCSEEEEEEEE-----------------------
T ss_pred             CHHHHhhCCCccCCCCCeeCCcCCCccceEEEEEEecHHHHHHCCCCeEEEEEEEEE-----------------------
Confidence                       332     23456689999999999999999999999999998861                       


Q ss_pred             hhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEe
Q psy5293         168 FVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINA  247 (359)
Q Consensus       168 ~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~  247 (359)
                                                              ..     ..|++.+.++.++++++|+++|++|+||||+|+
T Consensus       285 ----------------------------------------~~-----~~p~~~~~~~~~ai~~al~~agl~~~dId~ve~  319 (395)
T 4e1l_A          285 ----------------------------------------AG-----VEPEVMGTGPIPATRKALKKAGLSINDIDLIEA  319 (395)
T ss_dssp             ----------------------------------------EE-----CCGGGTTCTHHHHHHHHHHHTTCCGGGCSEEEE
T ss_pred             ----------------------------------------cc-----CCCCcchHHHHHHHHHHHHHcCCCHHHcCEEEe
Confidence                                                    11     122333345678999999999999999999999


Q ss_pred             ccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCC
Q psy5293         248 HATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT  325 (359)
Q Consensus       248 h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~  325 (359)
                      |+.++     .|..++.+.++  ..++++++.|.++|||+||||+.++++++++|+++                      
T Consensus       320 ~d~fa-----~~~~~~~~~lg~~~~~v~~~gg~~~~Gh~~gasG~~~~~~~~~~L~~~----------------------  372 (395)
T 4e1l_A          320 NEAFA-----AQALAVKNELQIDSSKLNVNGGAIALGHPIGASGARILVTLIYEMQKR----------------------  372 (395)
T ss_dssp             CCSBH-----HHHHHHHHHHTCCGGGBSTTCCHHHHCCCTTTHHHHHHHHHHHHHHHH----------------------
T ss_pred             cChhH-----HHHHHHHHHhCCCCCCCCcCCchhhcCCcHHHHHHHHHHHHHHHHHhc----------------------
Confidence            87754     45555666665  35688999999999999999999999999999831                      


Q ss_pred             cccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       326 ~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                              +.|+++++..+.||...++|||+
T Consensus       373 --------~~~~gl~~~c~ggG~g~a~~~e~  395 (395)
T 4e1l_A          373 --------KVETGLATLCIGGGQGISMVVSR  395 (395)
T ss_dssp             --------TCSEEEEEEESSTTEEEEEEEEC
T ss_pred             --------CCCEEEEEEccCCCceEEEEEeC
Confidence                    25899999888899999999985

>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium}

Probab=99.93  E-value=2.9e-25  Score=214.36  Aligned_cols=231  Identities=21%  Similarity=0.210  Sum_probs=166.8

Q ss_pred             HHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHH-------------------
Q psy5293          24 PAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIA-------------------   81 (359)
Q Consensus        24 ~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~-------------------   81 (359)
                      ++.+++..+|+  ++|+++|+++| |++.||..|+++|++|++|++||+|+|++.......                   
T Consensus        73 ~a~~va~~lGlp~~~pa~~v~~~Css~~~Al~~A~~~I~sG~~d~vLv~G~e~~s~~p~~~~~~~~~~~~~~~~~~~~~~  152 (407)
T 3svk_A           73 IARTAVLAAGLPETTGGVQLNRFCASGLEAVNTAAQKVRSGWDDLVLAGGVESMSRVPMGSDGGAWATDPETNYRIGFVP  152 (407)
T ss_dssp             HHHHHHHHTTCCTTCEEEEEC---CBSCCHHHHHHHHHHHTSCCEEEEEEEECC-----------CCCCTTTCCCCCCHH
T ss_pred             HHHHHHHHcCCCCCCceEEecCcChhHHHHHHHHHHHHHcCCCCEEEEEEEcccccCcccccccccccCchhhccccccC
Confidence            58899999999  57999999999 999999999999999999999999999977521100                   


Q ss_pred             -HH----------------Hh--------------hccccc-------cC---CCCCCCCCCC-------------ccCC
Q psy5293          82 -AF----------------CR--------------VRALAT-------QF---NNEPAQASRP-------------FDKR  107 (359)
Q Consensus        82 -~~----------------~~--------------~~~l~~-------~~---~~~~~~~~~~-------------fd~~  107 (359)
                       ..                ..              .+.+..       ..   ..+|++..|+             |++.
T Consensus       153 ~g~~Ae~~a~~~~i~re~~d~~a~~s~~~A~~A~~~g~~~~ei~pv~~~~g~~~~~pd~~~r~~~t~e~l~~~~~vf~~~  232 (407)
T 3svk_A          153 QGIGADLIATLEGFSREDVDAYALRSQQKAAAAWSGGYFAKSVVPVRDQNGLVILDHDEHMRPDTTMEGLAKLKTAFDGV  232 (407)
T ss_dssp             HHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHTTTTTTTBCCEECTTSCEEECSCTTCCTTCCHHHHHTSCBSCC--
T ss_pred             HHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHHHcCCcccceeeeecCCCceeeCCccccCCCCCHHHHhhCCCeecCC
Confidence             00                00              000000       00   0124444332             4432


Q ss_pred             --------------------------CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccc
Q psy5293         108 --------------------------RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSY  161 (359)
Q Consensus       108 --------------------------~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~  161 (359)
                                                .+...++||+++++|++.+.+.+++++++++|.+++                  
T Consensus       233 g~v~~~~~~~~~~~~~~~~i~~~~t~~~~s~~~DGAaavvL~s~~~A~~~g~~~~a~i~g~~------------------  294 (407)
T 3svk_A          233 GEMGGFDDVALQKYHWVEKINHVHTGGNSSGIVDGAALVLVGSEKAGKSQGLTPRARIVATA------------------  294 (407)
T ss_dssp             -----------CTTTTCSSCCCCCBTTTBCCBEEEEEEEEEECHHHHHHTTCCCCEEEEEEE------------------
T ss_pred             CccccccccccccccccccccccccccccCcccCceeEEEEeeHHHHHHcCCCCcEEEEEEE------------------
Confidence                                      244558999999999999999999999999999886                  


Q ss_pred             cccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCC
Q psy5293         162 NKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGD  241 (359)
Q Consensus       162 ~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~d  241 (359)
                                                                   ...+     .|.....++..+++++|+++|++|+|
T Consensus       295 ---------------------------------------------~~~~-----~p~~~~~~~~~a~~~al~~Agl~~~d  324 (407)
T 3svk_A          295 ---------------------------------------------TSGS-----DPVIMLTGPTPATRKVLDRAGLTIDD  324 (407)
T ss_dssp             ---------------------------------------------EC-----------CCCTHHHHHHHHHHHHTCCGGG
T ss_pred             ---------------------------------------------Eecc-----CCccccHHHHHHHHHHHHHcCCCHHH
Confidence                                                         2111     11112234578999999999999999


Q ss_pred             ccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC
Q psy5293         242 ISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG  319 (359)
Q Consensus       242 I~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~  319 (359)
                      |||+|.|++++.    .|+..+.. ++  ..++++++.+..+|||+||+|+.+++++++||++                 
T Consensus       325 Id~~e~hdaf~~----~~l~~~~~-lg~~~~~vn~~Gg~~~~GHp~gasG~~~~~~~~~~L~~-----------------  382 (407)
T 3svk_A          325 IDLFELNEAFAS----VVLKFQKD-LNIPDEKLNVNGGAIAMGHPLGATGAMITGTMVDELER-----------------  382 (407)
T ss_dssp             CSEEEECCSBHH----HHHHHHHH-HTCCGGGBSTTCCHHHHCBCGGGHHHHHHHHHHHHHHH-----------------
T ss_pred             CCEEEEeChhHH----HHHHHHHH-hCCCCCCCCCCCcHhheeCcHHHHHHHHHHHHHHHHHh-----------------
Confidence            999999999885    23332222 23  3478889999999999999999999999999982                 


Q ss_pred             CCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         320 GYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                            +       +.|+++++..+.||...++|||+.
T Consensus       383 ------~-------~~~~gl~~~c~ggG~g~a~~~e~~  407 (407)
T 3svk_A          383 ------R-------NARRALITLCIGGGMGVATIIERV  407 (407)
T ss_dssp             ------H-------TCCEEEEEEECSSSCEEEEEEEEC
T ss_pred             ------c-------CCCEEEEEeeccCcceEEEEEEcC
Confidence                  1       368999999999999999999973

>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2

Probab=99.88  E-value=2.1e-22  Score=188.81  Aligned_cols=221  Identities=20%  Similarity=0.175  Sum_probs=152.8

Q ss_pred             HHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCCC
Q psy5293          24 PAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASR  102 (359)
Q Consensus        24 ~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~  102 (359)
                      ++.+++..+|+++|+++|+++| |++.||..|+++|++|++|.+||+|+|.+. +.          +            .
T Consensus        89 ~a~~v~~~lgl~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~~----------~------------~  145 (322)
T 1ub7_A           89 TAALVQARFGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALS-KI----------I------------D  145 (322)
T ss_dssp             HHHHHHHHTTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GT----------S------------C
T ss_pred             HHHHHHHHhCCCCEEEeeCccchHHHHHHHHHHHHHHcCCCCEEEEEEechhc-cc----------c------------C
Confidence            4899999999999999999999 999999999999999999999999999732 11          0            1


Q ss_pred             CccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEee-cccccchhhhhhhhhhcccccccCcchhhcccCCcchhhh
Q psy5293         103 PFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIG-YGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQI  181 (359)
Q Consensus       103 ~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g-~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i  181 (359)
                      ++| +++++++|||+++++|++.+.    +.++++.... .+. ..+.+..     ...... .|..             
T Consensus       146 ~~d-~~~~~~~GdGA~A~vL~~~~~----~~~i~~~~~~~~g~-~~~~~~~-----~~~~~~-~p~~-------------  200 (322)
T 1ub7_A          146 WND-RATAVLFGDGGGAAVVGKVRE----GYGFRSFVLGADGT-GAKELYH-----ACVAPR-LPDG-------------  200 (322)
T ss_dssp             TTC-HHHHTTBCCEEEEEEEECCCT----TCEEEEEEEEECGG-GCTTEEE-----ESSCSB-CTTS-------------
T ss_pred             hhh-cccceeeccccEEEEEEecCC----CCceeEEEEEEecC-CCCeEEe-----CCCCCC-CCcc-------------
Confidence            233 557899999999999987543    3456655422 210 0000000     000000 0000             


Q ss_pred             HHHhccCCCCcccccccccCcccccccCCCccCCCCCcCh--------HHHHHHHHHHHHHcCCCCCCccEEEeccCCCC
Q psy5293         182 SIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDG--------RGALLAMTRALIDANLSPGDISYINAHATSTP  253 (359)
Q Consensus       182 a~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~--------~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~  253 (359)
                                               .  +  ........+        ....++++++|++++++++|||+++.|+++++
T Consensus       201 -------------------------~--~--~~~~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~  251 (322)
T 1ub7_A          201 -------------------------T--S--MKNRLYMNGREVFKFAVRVMNTATLEAIEKAGLTPEDIRLFVPHQANLR  251 (322)
T ss_dssp             -------------------------C--B--CCSSCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCSCHH
T ss_pred             -------------------------c--c--ccceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH
Confidence                                     0  0  000011122        46778999999999999999999999999987


Q ss_pred             cccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccC
Q psy5293         254 LGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTD  333 (359)
Q Consensus       254 ~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (359)
                      ..|     ++.+.++...-.+...|..+||+.+||+.+.+.++   ++++.+.                        +  
T Consensus       252 ~~d-----~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~l~~~---l~~g~~~------------------------~--  297 (322)
T 1ub7_A          252 IID-----AARERLGLPWERVAVNVDRYGNTSTASIPLALKEA---VDAGRIR------------------------E--  297 (322)
T ss_dssp             HHH-----HHHHTTTCCGGGBCCCHHHHCBCGGGHHHHHHHHH---HHHTSSC------------------------T--
T ss_pred             HHH-----HHHHHcCCCHHHHHHHHHhhCcHHHHHHHHHHHHH---HHhCCCC------------------------C--
Confidence            655     35556652222234668889999999999977664   4544431                        1  


Q ss_pred             CccEEEEeCcCcCcceeeEEEee
Q psy5293         334 GRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       334 ~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                       .+++++++||+|++++++||+.
T Consensus       298 -g~~~l~~~~G~G~~~~~~vl~~  319 (322)
T 1ub7_A          298 -GDHVLLVSFGAGLTWAAAVLTW  319 (322)
T ss_dssp             -TCEEEEEEEETTTEEEEEEEEC
T ss_pred             -CCEEEEEEEChhheeEEEEEEe
Confidence             4789999999999999999975

>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis}

Probab=99.88  E-value=9.7e-24  Score=209.26  Aligned_cols=265  Identities=11%  Similarity=0.027  Sum_probs=178.3

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHh----------------
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCR----------------   85 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~----------------   85 (359)
                      ++.+++..+|++. |.++++.+| |++++|..|++.|++|++|++|+||+|+|.+.........                
T Consensus        93 ~~~~va~~lGl~~~~~~~~~~~caSg~~av~~AA~aI~aG~advvlAgG~EsMS~~p~~~~~~~~~~~~~~~~~~~~~~~  172 (520)
T 4egv_A           93 YPRSVARNIGADPAHAVLEVIGGQSPQHLATEFGGKIAAGENDVVLIFGSENTSTLRHFSKAENKPDHSETVDGQLEDRG  172 (520)
T ss_dssp             HHHHHHHHHTCCCSEEEECCSSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECCC--------------------------
T ss_pred             HHHHHHHHcCCCCceEEEecCCCHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccccccccccccCccccccccccccc
Confidence            5888999999987 888899999 9999999999999999999999999999865422110000                


Q ss_pred             ---------------------------------hccccc---------------cCCCCCCCCC----------------
Q psy5293          86 ---------------------------------VRALAT---------------QFNNEPAQAS----------------  101 (359)
Q Consensus        86 ---------------------------------~~~l~~---------------~~~~~~~~~~----------------  101 (359)
                                                       .+....               ....+|+...                
T Consensus       173 ~~~~~~a~~~~~~~g~~~~~~~~~~~~s~~~a~~g~~~~~f~~eia~v~v~~~~~a~~np~a~~r~~~t~E~l~~l~p~~  252 (520)
T 4egv_A          173 YGYDGIFDEYTIRHGLIGAPVQYGLLENARRARLGLSVADYRLAMAELFAPFSKVAAKNPYSSAPTERSVEELLTVTASN  252 (520)
T ss_dssp             --------CTTGGGTCCSHHHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHHHHHHHHHCTTSSSCCCCCHHHHHSCCSSS
T ss_pred             cccchhHHHHHHHhCCCcHHHHHHHHHHHHHHHHccccchhhhheeEEEEecccccccCccccccCCCCHHHhcccCccc
Confidence                                             000000               0000111111                


Q ss_pred             ----CCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcc
Q psy5293         102 ----RPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMS  177 (359)
Q Consensus       102 ----~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~  177 (359)
                          .|+....+.....||+++++|.+.+.+.+.|.++.++|.+.+...                               
T Consensus       253 r~i~~p~~ta~nas~isDGAAAvVL~S~e~A~~lGl~p~a~I~~~a~a~-------------------------------  301 (520)
T 4egv_A          253 RMIVDPYPRLMVARDQVNQGAALLMMSVESARKLGVPEEKWVYLRGHAD-------------------------------  301 (520)
T ss_dssp             CEEETTEEGGGCC--CCCEEEEEEEEEHHHHHHHTCCGGGCEEEEEEEE-------------------------------
T ss_pred             ccccCCcccccccCCCCcceEEEEEeeHHHHHHcCCCCceEEEEEEEec-------------------------------
Confidence                111112234457899999999999999999887766665554110                               


Q ss_pred             hhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCC-cChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCccc
Q psy5293         178 AGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPR-EDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGD  256 (359)
Q Consensus       178 a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~-~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d  256 (359)
                                                    ..+......|+ ....++..+++++|+++|++++|||++|+|+.++. ..
T Consensus       302 ------------------------------~~~~~~~~~~~~~~~~~~~~a~~~al~~agl~~~did~~E~~dAF~~-~~  350 (520)
T 4egv_A          302 ------------------------------MKEPKLLERADIGASPASVTAVNEALRVAGIGLDDVAAFDLYSCFPF-PV  350 (520)
T ss_dssp             ------------------------------EECCCGGGCSCTTCCHHHHHHHHHHHHHHTCCGGGEEEEEECCSSSH-HH
T ss_pred             ------------------------------cCCcccccccccccChHHHHHHHHHHHHhCCCHHHCCEEEEeCCcHH-HH
Confidence                                          00000011111 11357788999999999999999999999998884 33


Q ss_pred             HHHHHHHHhhcC-CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC----CCCCCCcccccc
Q psy5293         257 VIELKAIGSLFP-AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG----GYECPTAVTEWK  331 (359)
Q Consensus       257 ~~E~~al~~~~~-~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~----~~~~~~~~~~~~  331 (359)
                      ...++.|+.+.. ..++++++.+.++|||.+++|+..++++++|||++..+..++  .+++.+.    ...+..++.+|+
T Consensus       351 l~~~~~lG~~~~~~~~~n~~Gg~~~~Ghp~~a~g~~~~~~~v~~lr~~~~~~~L~--~~~gg~~~~~~~~~l~~~~~~w~  428 (520)
T 4egv_A          351 FNICDGTGLATDDPRGLTLTGGLPFFGGLGNNYSMHGIAEAVNEMRDKPGQFALV--GANGGIASKYSVGIYSTEPADWV  428 (520)
T ss_dssp             HHHHHHHCCCTTCTTCSCSSCCHHHHCSCSSSHHHHHHHHHHHHHHHSTTCEEEE--EEEETTTTEEEEEEEESSCCCCC
T ss_pred             HHHHHHhCCCCCCCCCcCCCcccccCCChHHHHHHHHHHHHHHHHhcCCCCceEE--eCCCCeeeeeeEEEEcCCCCCCC
Confidence            444455544332 457899999999999999999999999999999998876665  3555544    233567888898


Q ss_pred             cCC-ccEEEEeCcCcCcceeeEEEeec
Q psy5293         332 TDG-RRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       332 ~~~-~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      ..+ ++++.+++     +|+|+++++.
T Consensus       429 ~~~~~~~~~~~~-----~~~~~~~~~~  450 (520)
T 4egv_A          429 ADNSAQLQAEHD-----AQPKVAITEK  450 (520)
T ss_dssp             CCCHHHHHHHHH-----TSCCCCBCSS
T ss_pred             CCCCCccccccc-----CCCCcccccC
Confidence            643 45665555     7788887764

>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus}

Probab=99.85  E-value=6.1e-21  Score=177.71  Aligned_cols=213  Identities=19%  Similarity=0.191  Sum_probs=150.1

Q ss_pred             CCChHHHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCC
Q psy5293          19 FPNMVPAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNE   96 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~   96 (359)
                      +++.  +.+++..+|+++ |+++|+++| |++.||..|+++|++|++|.+||+|+|.+...           +       
T Consensus        86 ~~~~--a~~v~~~lgl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vlv~g~e~~s~~-----------~-------  145 (309)
T 2ebd_A           86 FPST--ACLVQAQLKAKGVYAFDISAACSGFIYALDIADSFIKSGKAKNVLVIGAEKLSEA-----------V-------  145 (309)
T ss_dssp             SSCH--HHHHHHHHTCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGT-----------C-------
T ss_pred             CCcH--HHHHHHHhCCCCceEEecCccchHHHHHHHHHHHHHHCCCCCEEEEEEecccccc-----------c-------
Confidence            4554  899999999998 999999999 99999999999999999999999999974210           1       


Q ss_pred             CCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCc
Q psy5293          97 PAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNM  176 (359)
Q Consensus        97 ~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  176 (359)
                            .|+++.+++++|||+++++|++.+.+    .++++...+.....    .      +    .+            
T Consensus       146 ------~~~~~~~~~~~gdGaaA~vL~~~~~~----~~i~~~~~~~~g~~----~------~----~~------------  189 (309)
T 2ebd_A          146 ------DWEDRSTCVLFGDGAGAVVVTRSEDK----SDILATRMYAEGSL----E------E----LL------------  189 (309)
T ss_dssp             ------CTTCTTTTTTBCEEEEEEEEEECSSS----CEEEEEEEEECGGG----G------G----GE------------
T ss_pred             ------CccchhhccccccccEEEEEEecCCC----CceeEEEEEecCCc----c------c----ee------------
Confidence                  12345678999999999999876432    23555443311000    0      0    00            


Q ss_pred             chhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcCh--------HHHHHHHHHHHHHcCCCCCCccEEEec
Q psy5293         177 SAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDG--------RGALLAMTRALIDANLSPGDISYINAH  248 (359)
Q Consensus       177 ~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~--------~~~~~a~~~al~~agl~~~dI~~ie~h  248 (359)
                                                   ......    .+...+        ....++++++|++++++++|||+++.|
T Consensus       190 -----------------------------~~p~~~----~~~~~g~~~~~~~~~~~~~~i~~al~~agl~~~did~~~~H  236 (309)
T 2ebd_A          190 -----------------------------HADNCG----YIRMKGRELFKVAVRSMEEVCREVLEKAGVKPEEVSLVIPH  236 (309)
T ss_dssp             -----------------------------EECTTC----CEEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred             -----------------------------EeCCCC----eEEEccHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence                                         000000    001111        266789999999999999999999999


Q ss_pred             cCCCCcccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCccc
Q psy5293         249 ATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVT  328 (359)
Q Consensus       249 ~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~  328 (359)
                      ++++...|     ++.+.++...-.+...|..+||+.+||+++.+.+++.+   +.+                       
T Consensus       237 ~~~~~~~~-----~~~~~lg~~~~~~~~~~~~~Gh~~~As~~~~L~~~~~~---g~~-----------------------  285 (309)
T 2ebd_A          237 QANVRIIN-----ALAEKLNIPKEKVFVNIQKYGNTSAASIPIALHEAIKE---GKV-----------------------  285 (309)
T ss_dssp             CSCHHHHH-----HHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHHHT---TCC-----------------------
T ss_pred             CCCHHHHH-----HHHHHhCCCHHHhhhhHhhhcchHHHHHHHHHHHHHHc---CCC-----------------------
Confidence            99987544     34555552211233557889999999999988877542   211                       


Q ss_pred             ccccCCccEEEEeCcCcCcceeeEEEe
Q psy5293         329 EWKTDGRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       329 ~~~~~~~~~~~~~~~g~gG~~~~~il~  355 (359)
                        +  ..+.+++.++|.|.+.++++++
T Consensus       286 --~--~G~~~l~~~~G~G~~~~~~~l~  308 (309)
T 2ebd_A          286 --K--RGDLILMTAMGGGLTWGAVLLR  308 (309)
T ss_dssp             --C--TTCEEEEEEEETTTEEEEEEEE
T ss_pred             --C--CCCEEEEEEEchhhhhEEEEEE
Confidence              0  1468899999999999999886

>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A*

Probab=99.84  E-value=2.8e-20  Score=173.88  Aligned_cols=217  Identities=15%  Similarity=0.106  Sum_probs=149.9

Q ss_pred             HHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      ++.+++..+|++ +|+++|+++| |++.||..|+++|++|++|.+||+|+|.+. ..          +.           
T Consensus        90 ~a~~v~~~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vlv~g~e~~s-~~----------~~-----------  147 (317)
T 1hnj_A           90 AACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLA-RT----------CD-----------  147 (317)
T ss_dssp             HHHHHHHHHTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHH-HH----------SC-----------
T ss_pred             HHHHHHHHhCCCCCeEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhc-cc----------CC-----------
Confidence            599999999998 8999999999 999999999999999999999999999722 11          00           


Q ss_pred             CCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhh
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQI  181 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i  181 (359)
                        |+++.+|+++|||+++++|++.+.     .++++.+.+......+.+.        .+.   |....           
T Consensus       148 --~~d~~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~~~~~~~--------~~~---~~~~~-----------  198 (317)
T 1hnj_A          148 --PTDRGTIIIFGDGAGAAVLAASEE-----PGIISTHLHADGSYGELLT--------LPN---ADRVN-----------  198 (317)
T ss_dssp             --TTCHHHHTTBCCEEEEEEEEEESS-----CSEEEEEEEECGGGGGGEE--------CCC---CCSSC-----------
T ss_pred             --chhcccceeeccccEEEEEEecCC-----CceeeEEEEEcCCCCCeEE--------ECC---CCCCC-----------
Confidence              123345899999999999987542     3577665442100000000        000   00000           


Q ss_pred             HHHhccCCCCcccccccccCcccccccCCCccCCCCCcChH--------HHHHHHHHHHHHcCCCCCCccEEEeccCCCC
Q psy5293         182 SIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGR--------GALLAMTRALIDANLSPGDISYINAHATSTP  253 (359)
Q Consensus       182 a~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~--------~~~~a~~~al~~agl~~~dI~~ie~h~~~t~  253 (359)
                                               .  .  ....+.+.+.        ...++++++|++++++++||||++.|+++++
T Consensus       199 -------------------------~--~--~~~~~~~~g~~~~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~  249 (317)
T 1hnj_A          199 -------------------------P--E--NSIHLTMAGNEVFKVAVTELAHIVDETLAANNLDRSQLDWLVPHQANLR  249 (317)
T ss_dssp             -------------------------T--T--SCCSCEECHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEEECCSCHH
T ss_pred             -------------------------C--C--CCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH
Confidence                                     0  0  0000112223        6678999999999999999999999999998


Q ss_pred             cccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccC
Q psy5293         254 LGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTD  333 (359)
Q Consensus       254 ~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (359)
                      ..|     ++.+.++...-.+...|..+||+.+||..+.+.+++   +++.+.                        +  
T Consensus       250 ~~d-----~i~~~lg~~~~~~~~~~~~~Gn~~~As~~~~L~~~~---~~~~~~------------------------~--  295 (317)
T 1hnj_A          250 IIS-----ATAKKLGMSMDNVVVTLDRHGNTSAASVPCALDEAV---RDGRIK------------------------P--  295 (317)
T ss_dssp             HHH-----HHHHHTTCCGGGBCCCHHHHCBCGGGHHHHHHHHHH---HTTCSC------------------------T--
T ss_pred             HHH-----HHHHHcCCCHHHhHhhHhhhCcHHHHHHHHHHHHHH---HhCCCC------------------------C--
Confidence            655     355566532223457788999999999988776653   422210                        1  


Q ss_pred             CccEEEEeCcCcCcceeeEEEe
Q psy5293         334 GRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       334 ~~~~~~~~~~g~gG~~~~~il~  355 (359)
                       .+..+..+||.|.+.++++|+
T Consensus       296 -G~~vll~~~G~G~t~~~~~l~  316 (317)
T 1hnj_A          296 -GQLVLLEAFGGGFTWGSALVR  316 (317)
T ss_dssp             -TCEEEEEEEETTTEEEEEEEE
T ss_pred             -CCEEEEEEEchhheeEEEEEE
Confidence             368889999998888888875

>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A

Probab=99.82  E-value=3.6e-20  Score=172.78  Aligned_cols=216  Identities=17%  Similarity=0.177  Sum_probs=146.9

Q ss_pred             HHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      ++.+++..+|++ +|+++|+++| |++.||..|+++|++|++|.+||+|+|.+...                       .
T Consensus        90 ~a~~v~~~lgl~~~~~~~v~~aCas~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------------------~  146 (313)
T 1zow_A           90 VANMLQERLGTGKVASMDQLAACSGFMYSMITAKQYVQSGDYHNILVVGADKLSKI-----------------------T  146 (313)
T ss_dssp             HHHHHHHHHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEEGGGT-----------------------C
T ss_pred             HHHHHHHHhCCCCCcEEEECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccccc-----------------------c
Confidence            489999999998 5999999999 99999999999999999999999999973211                       1


Q ss_pred             CCccCCCCCceecceeeEEeecchHHHHhcCCcEEEE-EeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhh
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAE-IIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQ  180 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~-i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~  180 (359)
                      +|++ ..+++++|||+++++|++.+.    +.++++. +.+.+. ..+.+.        .+.   |   ..         
T Consensus       147 ~~~d-~~~~~~~gdGa~A~vl~~~~~----~~~i~~~~~~~~g~-~~~~~~--------~~~---~---~~---------  197 (313)
T 1zow_A          147 DLTD-RSTAVLFGDGAGAVIIGEVSE----GRGIISYEMGSDGT-GGKHLY--------LDK---D---TG---------  197 (313)
T ss_dssp             CTTC-HHHHTTBCEEEEEEEEEECST----TCEEEEEEEEECGG-GGGGEE--------ECT---T---TC---------
T ss_pred             Cccc-ccceeeeccceEEEEEEecCC----CCceeEEEEEEcCC-CcCeEE--------ecC---C---CC---------
Confidence            2233 235889999999999987543    3455543 222220 000000        000   0   00         


Q ss_pred             hHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHH
Q psy5293         181 ISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIEL  260 (359)
Q Consensus       181 ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~  260 (359)
                                             .+.+  ++...  +........++++++|++++++++|||+++.|++++...|..  
T Consensus       198 -----------------------~~~~--~g~~~--~~~~~~~~~~~i~~al~~agl~~~did~~~~H~~~~~~~d~~--  248 (313)
T 1zow_A          198 -----------------------KLKM--NGREV--FKFAVRIMGDASTRVVEKANLTSDDIDLFIPHQANIRIMESA--  248 (313)
T ss_dssp             -----------------------CEEE--CHHHH--HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHHHHHH--
T ss_pred             -----------------------eeEe--ccHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHHHHHH--
Confidence                                   0000  00000  000113667899999999999999999999999999866653  


Q ss_pred             HHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEE
Q psy5293         261 KAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVA  338 (359)
Q Consensus       261 ~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (359)
                         .+.++  ..+++  ..|..+||+.+|+++..+.+++   +++.+                         +  ..+.+
T Consensus       249 ---~~~lg~~~~~~~--~~~~~~Gh~~~as~~~~L~~~~---~~~~~-------------------------~--~g~~v  293 (313)
T 1zow_A          249 ---RERLGISKDKMS--VSVNKYGNTSAASIPLSIDQEL---KNGKL-------------------------K--DDDTI  293 (313)
T ss_dssp             ---HHHHTCCGGGBC--CCHHHHCBCGGGHHHHHHHHHH---HTTCC-------------------------C--TTCEE
T ss_pred             ---HHHhCCCHHHHH--HhHhhhCchHHHHHHHHHHHHH---HcCCC-------------------------C--CCCEE
Confidence               33344  22344  3588899999999999887754   32211                         1  14789


Q ss_pred             EEeCcCcCcceeeEEEe
Q psy5293         339 LKNSFGFGGTNACLCIA  355 (359)
Q Consensus       339 ~~~~~g~gG~~~~~il~  355 (359)
                      ++.+||.|.+.++++++
T Consensus       294 l~~~~G~G~t~~~~~l~  310 (313)
T 1zow_A          294 VLVGFGGGLTWGAMTIK  310 (313)
T ss_dssp             EEEEEETTTEEEEEEEE
T ss_pred             EEEEEchhhhheEEEEE
Confidence            99999999999999886

>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2

Probab=99.78  E-value=3.8e-19  Score=167.85  Aligned_cols=230  Identities=20%  Similarity=0.203  Sum_probs=147.2

Q ss_pred             CCChHHHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCC
Q psy5293          19 FPNMVPAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNE   96 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~   96 (359)
                      ++++  +.+++..+|++ +|+++|+++| |++.||..|+++|++|++|.+||+|+|.+. +.          +.      
T Consensus        96 ~p~~--a~~v~~~lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s-~~----------~~------  156 (339)
T 1mzj_A           96 TPPL--SVAIAHELGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-DV----------ID------  156 (339)
T ss_dssp             SSCH--HHHHHHHHTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-GG----------SC------
T ss_pred             CChH--HHHHHHHhCCCCccEEEccccchHHHHHHHHHHHHHHCCCCCEEEEEEEcccc-cc----------cC------
Confidence            4555  89999999998 7999999999 999999999999999999999999999732 21          11      


Q ss_pred             CCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEe-ecccccchhhhhhhhhhcccccccCcchhhcccCC
Q psy5293          97 PAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEII-GYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPN  175 (359)
Q Consensus        97 ~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~-g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  175 (359)
                             ++++.+++++|||+++++|++.+.     .++++... +.+. ..+.+.        .+.. .|..... +  
T Consensus       157 -------~~d~~~~~~~GdGA~A~vL~~~~~-----~~i~~~~~~~~g~-~~~~~~--------~~g~-~p~~~~~-~--  211 (339)
T 1mzj_A          157 -------LADRSLSFLFGDGAGAAVVGPSDV-----PGIGPVVRGIDGT-GLGSLH--------MSSS-WDQYVED-P--  211 (339)
T ss_dssp             -------SSCTTTTTTBCEEEEEEEEEEESS-----CCBCCCEEEECGG-GGGGEE--------ESCC-HHHHTTC-S--
T ss_pred             -------ccccccceEeccCceEEEEEecCC-----CCeEEEEEEEcCC-CCCeEE--------ecCC-CCCcccc-c--
Confidence                   123467899999999999987532     33433221 1110 000000        0000 0000000 0  


Q ss_pred             cchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcc
Q psy5293         176 MSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLG  255 (359)
Q Consensus       176 ~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~  255 (359)
                                .             .....+.+  ++...  +........++++++|++++++++||||++.|.++++..
T Consensus       212 ----------~-------------~~~~~~~~--~g~~v--~~~~~~~~~~~i~~aL~~agl~~~did~v~~H~~~~~~~  264 (339)
T 1mzj_A          212 ----------S-------------VGRPALVM--DGKRV--FRWAVADVVPAAREALEVAGLTVGDLVAFVPHQANLRII  264 (339)
T ss_dssp             ----------S-------------SCSCCEEE--CHHHH--HHHHHHHHHHHHHHHHHTTTCCGGGCSEEEECCSCHHHH
T ss_pred             ----------c-------------cccceEEe--eCHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHH
Confidence                      0             00000000  00000  000014667899999999999999999999999999866


Q ss_pred             cHHHHHHHHhhcC--CC-CceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCccccccc
Q psy5293         256 DVIELKAIGSLFP--AQ-RLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKT  332 (359)
Q Consensus       256 d~~E~~al~~~~~--~~-~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (359)
                      |.     +.+.++  .. +++  .....+||+.+||..+.+.+++   +++.+                        .+ 
T Consensus       265 d~-----i~~~lg~~~~~~~~--~~~~~~Gn~~sAs~~~~L~~~~---~~g~~------------------------~~-  309 (339)
T 1mzj_A          265 DV-----LVDRLGVPEHVVVS--RDAEDTGNTSSASVALALDRLV---RSGAV------------------------PG-  309 (339)
T ss_dssp             HH-----HHHHHTCCTTSEEC--CTHHHHCBCTTHHHHHHHHHHH---HHTSS------------------------CT-
T ss_pred             HH-----HHHHhCCCccceee--ehhhhcCchHHHHHHHHHHHHH---HcCCC------------------------CC-
Confidence            64     334444  22 333  2245789999999888776554   32221                        01 


Q ss_pred             CCccEEEEeCcCcCcceeeEEEee
Q psy5293         333 DGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       333 ~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                        .+.++..+||.|.+.++++|+-
T Consensus       310 --G~~vll~~~G~G~t~~~~~l~~  331 (339)
T 1mzj_A          310 --GGPALMIGFGAGLSYAGQALLL  331 (339)
T ss_dssp             --TCEEEEEEEETTTEEEEEEEEC
T ss_pred             --CCEEEEEEEchhheeEEEEEEe
Confidence              4688999999999999999864

>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa}

Probab=99.76  E-value=2.4e-18  Score=161.76  Aligned_cols=225  Identities=16%  Similarity=0.161  Sum_probs=148.7

Q ss_pred             CCChHHHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCC
Q psy5293          19 FPNMVPAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNE   96 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~   96 (359)
                      +|++  +.+++..+|++ +|+++|+++| |++.||..|+++|++|++|.+||+|+|.+. +.          +.      
T Consensus        87 ~p~~--a~~v~~~lgl~~~~~~~v~~aCas~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~----------~~------  147 (331)
T 2x3e_A           87 CPAT--APRVAARLGLVGALAFDLSAAATGFVYGLASVGSLISAGLADSALLVGVDTFS-HT----------LD------  147 (331)
T ss_dssp             ESCS--HHHHHHHTTCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECGG-GG----------SC------
T ss_pred             CChH--HHHHHHHhCCCCCcEEEEcCcChHHHHHHHHHHHHHHcCCCCEEEEEEeeccc-cC----------CC------
Confidence            4555  88999999998 7999999999 999999999999999999999999999732 21          00      


Q ss_pred             CCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCc
Q psy5293          97 PAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNM  176 (359)
Q Consensus        97 ~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  176 (359)
                             ++++.+++++|||+++++|++.+.+  ++.++++..........+.+.                     .+..
T Consensus       148 -------~~d~~~~~~~GdGA~A~vL~~~~~a--~~~~i~~~~~~~dg~~~~~~~---------------------~p~~  197 (331)
T 2x3e_A          148 -------PADRSTRALFGDGAGAVVLRAGDAE--EEGALLAFDLGSDGHQFDLLM---------------------TPAV  197 (331)
T ss_dssp             -------TTCHHHHHHBCCEEEEEEEEEECTT--STTBEEEEEEEECGGGTTSEE---------------------EECC
T ss_pred             -------ccccccceeeccccEEEEEEecCCC--CCCceEEEEEEEcCCCCCeEE---------------------ecCC
Confidence                   1223468999999999999876533  344565543221100000000                     0000


Q ss_pred             chhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcCh--------HHHHHHHHHHHHHcCCCCCCccEEEec
Q psy5293         177 SAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDG--------RGALLAMTRALIDANLSPGDISYINAH  248 (359)
Q Consensus       177 ~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~--------~~~~~a~~~al~~agl~~~dI~~ie~h  248 (359)
                      ... .-..                      ..    ........+        ....++++++|++++++++|||++..|
T Consensus       198 ~~~-~p~~----------------------~~----~~~~~~~~g~~v~~~~~~~~~~~i~~aL~~agl~~~did~~~~H  250 (331)
T 2x3e_A          198 SRA-ERSS----------------------GQ----ASNYFRMDGKAVFGQAVTQMSDSVRRVLDRVGWQASDLHHLVPH  250 (331)
T ss_dssp             CHH-HHHH----------------------TC----CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEEEC
T ss_pred             CCC-CCCc----------------------cC----cCceEEecCHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEc
Confidence            000 0000                      00    000001111        466789999999999999999999999


Q ss_pred             cCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc
Q psy5293         249 ATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTA  326 (359)
Q Consensus       249 ~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~  326 (359)
                      .++++..|.     +.+.++  ..+++.  ....+||+.+||....+.++   ++++.+                     
T Consensus       251 ~~~~~~~d~-----~~~~lg~~~~~~~~--~~~~~Gnt~sAs~~~~L~~~---~~~~~~---------------------  299 (331)
T 2x3e_A          251 QANTRILAA-----VADQLDLPVERVVS--NIAEVGNTVAASIPLALAHG---LRQGIL---------------------  299 (331)
T ss_dssp             CCCHHHHHH-----HHHHHTCCGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTCS---------------------
T ss_pred             CCCHHHHHH-----HHHHcCCCHHHHhh--hHhhhCcHHHHHHHHHHHHH---HHhCCC---------------------
Confidence            999986654     333444  223443  24678999999987766554   332221                     


Q ss_pred             ccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         327 VTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                         .+   .+.++..+||.|.+.++++++-
T Consensus       300 ---~~---G~~vll~~~G~G~~~~~~~l~~  323 (331)
T 2x3e_A          300 ---RD---GGNMVLTGFGAGLTWGSVALRW  323 (331)
T ss_dssp             ---CT---TCEEEEEEEETTTEEEEEEEEC
T ss_pred             ---CC---CCEEEEEEEeHHhhheeeEEEE
Confidence               11   4789999999999999999864

>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A

Probab=99.74  E-value=1.3e-17  Score=156.94  Aligned_cols=227  Identities=18%  Similarity=0.214  Sum_probs=140.9

Q ss_pred             HHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      ++.+++..+|++ +|+++|+++| |++.||..|+++|++|++|.+||+|+|.+...           +            
T Consensus       100 ~a~~v~~~lgl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------~------------  156 (335)
T 1u6e_A          100 AAPMVAASLGAKGILGFDLSAGAAGFGYALGAAADMIRGGGAATMLVVGTEKLSPT-----------I------------  156 (335)
T ss_dssp             HHHHHHHHHTCTTSEEEEEECGGGHHHHHHHHHHHHHHHTSCSSEEEEEEEECGGG-----------C------------
T ss_pred             HHHHHHHHhCCCCCcEeeeccccHHHHHHHHHHHHHHHcCCCCEEEEEEEcccccc-----------c------------
Confidence            489999999998 5999999999 99999999999999999999999999984310           1            


Q ss_pred             CCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhh
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQI  181 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~i  181 (359)
                      ++++ ..+++++|||+++++|++.+.   ++  ++..+.+......+.+..        +   .+ + ..+..       
T Consensus       157 ~~~d-~~~~~~~gDGA~A~vl~~~~~---~~--i~~~~~~~~g~~~~~~~~--------~---~~-~-~~~~~-------  210 (335)
T 1u6e_A          157 DMYD-RGNCFIFADGAAAVVVGETPF---QG--IGPTVAGSDGEQADAIRQ--------D---ID-W-ITFAQ-------  210 (335)
T ss_dssp             CTTC-TTTTTTBCEEEEEEEEEECSS---CC--BCCCEEEECGGGGGGEEE--------S---SC-H-HHHHT-------
T ss_pred             Cccc-cccceEeccccEEEEEEecCC---CC--eeEEEEEEcCCcccceee--------c---CC-c-cCcCC-------
Confidence            2222 347899999999999987542   11  222222211000000000        0   00 0 00000       


Q ss_pred             HHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHH
Q psy5293         182 SIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELK  261 (359)
Q Consensus       182 a~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~  261 (359)
                             .|..        ....+.+  ++...  +........++++++|++++++++|||+++.|++++...|..   
T Consensus       211 -------~~~~--------~~~~~~~--~g~~~--~~~~~~~~~~~i~~al~~agl~~~dId~~~~H~~~~~~~~~~---  268 (335)
T 1u6e_A          211 -------NPSG--------PRPFVRL--EGPAV--FRWAAFKMGDVGRRAMDAAGVRPDQIDVFVPHQANSRINELL---  268 (335)
T ss_dssp             -------STTS--------CCCCEEE--CHHHH--HHHHHHHHHHHHHHHHHHHTCCGGGCCEEEECCSCHHHHHHH---
T ss_pred             -------CccC--------ccceEEE--cCHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHHHHHHH---
Confidence                   0000        0000000  00000  000124667889999999999999999999999999866553   


Q ss_pred             HHHhhcC--CC-CceecccccccchHHHhHHHHHHHHHHHHHh-cCCCCCCCCCCCCCccCCCCCCCCcccccccCCccE
Q psy5293         262 AIGSLFP--AQ-RLMVSSTKGAHGHLLGAAGNLESAFTILAVH-EGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRV  337 (359)
Q Consensus       262 al~~~~~--~~-~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~-~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  337 (359)
                        .+.++  .. ++.  ..+..+||+.+|+...    ++.++. ++.                         .+  ..+.
T Consensus       269 --~~~lg~~~~~~~~--~~~~~~Gnt~sAs~~~----~L~~~~~~~~-------------------------~~--~g~~  313 (335)
T 1u6e_A          269 --VKNLQLRPDAVVA--NDIEHTGNTSAASIPL----AMAELLTTGA-------------------------AK--PGDL  313 (335)
T ss_dssp             --HHHHTCCTTCEEC--CTHHHHCBCGGGHHHH----HHHHHHHHTS-------------------------SC--TTCE
T ss_pred             --HHHcCCCchhhhh--hhhhhhCcHHHHHHHH----HHHHHHHcCC-------------------------CC--CCCE
Confidence              23333  22 232  2356789999999543    333332 111                         01  1478


Q ss_pred             EEEeCcCcCcceeeEEEee
Q psy5293         338 ALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       338 ~~~~~~g~gG~~~~~il~~  356 (359)
                      +++++||+|.++++++|+.
T Consensus       314 ~l~~~~G~G~t~~~~vl~~  332 (335)
T 1u6e_A          314 ALLIGYGAGLSYAAQVVRM  332 (335)
T ss_dssp             EEEEEEETTTEEEEEEEEC
T ss_pred             EEEEEEehhheeEEEEEEe
Confidence            9999999999999999975

>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2

Probab=99.69  E-value=2.1e-17  Score=158.33  Aligned_cols=225  Identities=18%  Similarity=0.130  Sum_probs=144.9

Q ss_pred             CCChHHHHHHHHHcCCCc--cceec-cccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKV--QTLCV-YCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~g--p~~~v-~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      ++++  +.+|+..+|+++  |.++| +++| |++.||..|+++|++|.+|.+||+|+|.+. +.                
T Consensus       119 ~p~~--a~~v~~~lGl~~~~~~~~v~~~aCss~~~Al~~A~~~i~~g~~~~vLv~g~e~~s-~~----------------  179 (382)
T 1u0m_A          119 MPSL--TAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEFCS-LC----------------  179 (382)
T ss_dssp             SSCH--HHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEEGG-GG----------------
T ss_pred             CCcH--HHHHHHHhCCCCCcceEEccCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEeccc-hh----------------
Confidence            4555  899999999998  89999 9999 999999999999999999999999999732 11                


Q ss_pred             CCCCCCCCCccCCCC----CceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhh
Q psy5293          95 NEPAQASRPFDKRRD----GFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVT  170 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~----G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~  170 (359)
                            .+++|..++    ++++|||+++++|++.+.   ++.++.+.......... ...           .+      
T Consensus       180 ------~~~~d~~~~~~~~~~lfGDGA~A~vL~~~~~---~g~~i~~~~~~~~~~~~-~~~-----------~~------  232 (382)
T 1u0m_A          180 ------YQPTDLGVGSLLCNGLFGDGIAAAVVRGRGG---TGVRLERNGSYLIPKTE-DWI-----------MY------  232 (382)
T ss_dssp             ------CCTTCCSHHHHHHHHHBCEEEEEEEEETTTC---SEEEEEEEEEEECSSCT-TTE-----------EE------
T ss_pred             ------cCcccCCHHHhhccchhcCCcEEEEEeccCC---CCcEEEEeeeEecCChH-Hhc-----------Cc------
Confidence                  122333222    789999999999986532   23333332221100000 000           00      


Q ss_pred             cccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccC
Q psy5293         171 RILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT  250 (359)
Q Consensus       171 ~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~  250 (359)
                                     ...          ..|.. +-..     ...|........ +++++|+++|++++|||+++.|.+
T Consensus       233 ---------------~~~----------~~g~~-~~~~-----~~v~~~~~~~~~-~i~~aL~~agl~~~dId~v~~H~~  280 (382)
T 1u0m_A          233 ---------------DVK----------ATGFH-FLLD-----KRVPATMEPLAP-ALKELAGEHGWDASDLDFYIVHAG  280 (382)
T ss_dssp             ---------------EEE----------TTEEE-EEEC-----TTTGGGHHHHHH-HHHHHHHTTSCCSSCCSCCEEECS
T ss_pred             ---------------eec----------CCceE-EEeC-----cHHHHHHHHHHH-HHHHHHHHcCCCHHHCCEEEECCC
Confidence                           000          00000 0000     011222235667 899999999999999999999999


Q ss_pred             CCCcccHHHHHHHHhhcC--CCCcee-cccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcc
Q psy5293         251 STPLGDVIELKAIGSLFP--AQRLMV-SSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAV  327 (359)
Q Consensus       251 ~t~~~d~~E~~al~~~~~--~~~~~v-~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~  327 (359)
                      +++..|.     +.+.++  ..++++ ...+..+||+.+||....+.+++   +++.+.                     
T Consensus       281 ~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sAsi~~~L~~~~---~~g~~~---------------------  331 (382)
T 1u0m_A          281 GPRILDD-----LSTFLEVDPHAFRFSRATLTEYGNIASAVVLDALRRLF---DEGGVE---------------------  331 (382)
T ss_dssp             HHHHHHH-----HHHHSCSCGGGGHHHHHHHHHTCBCTTHHHHHHHHHHH---HSCCCC---------------------
T ss_pred             CHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---HhcCCC---------------------
Confidence            9875553     344444  223433 23456789999999777766654   322210                     


Q ss_pred             cccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         328 TEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       328 ~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                         +   .+.++..+||.|.+.++++|+-
T Consensus       332 ---~---Gd~vll~~~G~G~t~~~~vl~~  354 (382)
T 1u0m_A          332 ---E---GARGLLAGFGPGITAEMSLGCW  354 (382)
T ss_dssp             ---S---SCCCEEEEEETTTEEEEEEEEE
T ss_pred             ---C---CCEEEEEEEcccceeEEEEEEE
Confidence               1   3577888999988888888864

>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A

Probab=99.60  E-value=1.3e-15  Score=146.36  Aligned_cols=234  Identities=16%  Similarity=0.093  Sum_probs=146.5

Q ss_pred             CCChHHHHHHHHHcCCCcc--ceec-cccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQ--TLCV-YCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp--~~~v-~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      ++++  +.+++..+|++++  .+++ +++| |++.||..|+++|++|.+|.+||+|+|.+....           .    
T Consensus       148 ~p~~--a~~v~~~lGl~~~~~~~~v~~~aCas~~~Al~~A~~~i~~G~~~~vLv~g~e~~s~~~-----------~----  210 (393)
T 1ted_A          148 APGV--DVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA-----------V----  210 (393)
T ss_dssp             SSCH--HHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC-----------C----
T ss_pred             cChH--HHHHHHHcCcCCCcceeEeccchhHHHHHHHHHHHHHHHcCCCCEEEEEEEEeccccC-----------C----
Confidence            4555  8999999999984  5887 9999 999999999999999999999999999743210           0    


Q ss_pred             CCCCCCCCCccCCC----CCceecceeeEEeecchHHHHhcCCcEEEEEeecccc-cchhhhhhhhhhcccccccCcchh
Q psy5293          95 NEPAQASRPFDKRR----DGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMI-DLSDVLSSNNALQGSYNKLSPYFV  169 (359)
Q Consensus        95 ~~~~~~~~~fd~~~----~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~-~~~~~~~~~~~~~~~~~~~~p~~~  169 (359)
                               |+.++    .++++|||+++++|++.+.+..++. .++++.+.+.. ..+..        ... .+..   
T Consensus       211 ---------~~~~r~~~~~~~lfGDGA~A~vL~~~~~~~~~~~-~~~~i~~~~~~~~~d~~--------~~~-~~~~---  268 (393)
T 1ted_A          211 ---------FADDINDVVIHSLFGDGCAALVIGASQVQEKLEP-GKVVVRSSFSQLLDNTE--------DGI-VLGV---  268 (393)
T ss_dssp             ---------CCSSHHHHHHHHHBCEEEEEEEEEEECTTSCCCT-TCEEEEEEEEEECTTCT--------TSE-EEEE---
T ss_pred             ---------CCCCHHHhhhhhhhcCccEEEEEecCCCccccCc-ceeeeeccceEEcCCch--------hhc-ccee---
Confidence                     22233    3789999999999987543312222 23445543200 00000        000 0000   


Q ss_pred             hcccCCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEecc
Q psy5293         170 TRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHA  249 (359)
Q Consensus       170 ~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~  249 (359)
                      .                            ..|..   .. ++.  ..|........++++++|+++|++++|||++..|.
T Consensus       269 ~----------------------------~~g~~---~~-~g~--~v~~~~~~~~~~~i~~aL~~agl~~~dId~~~~H~  314 (393)
T 1ted_A          269 N----------------------------HNGIT---CE-LSE--NLPGYIFSGVAPVVTEMLWDNGLQISDIDLWAIHP  314 (393)
T ss_dssp             E----------------------------TTEEE---EE-ECT--THHHHHHHHHHHHHHHHHHHTTCCGGGCSCEEECC
T ss_pred             c----------------------------CCCeE---Ee-cCc--hHHHHHHHHHHHHHHHHHHHcCCCHhHCCEEEECC
Confidence            0                            00000   00 000  00111225667889999999999999999999999


Q ss_pred             CCCCcccHHHHHHHHhhcC--CCCceec-ccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc
Q psy5293         250 TSTPLGDVIELKAIGSLFP--AQRLMVS-STKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTA  326 (359)
Q Consensus       250 ~~t~~~d~~E~~al~~~~~--~~~~~v~-~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~  326 (359)
                      .++...|..+     +.++  ..+++++ .....+||+.+||-...+.++   ++++.+                     
T Consensus       315 ~~~~i~d~~~-----~~lgl~~~k~~~s~~~~~~~GNt~sAsi~~~L~~~---~~~g~~---------------------  365 (393)
T 1ted_A          315 GGPKIIEQSV-----RSLGISAELAAQSWDVLARFGNMLSVSLIFVLETM---VQQAES---------------------  365 (393)
T ss_dssp             SCHHHHHHHH-----HHHTCCGGGGHHHHHHHHHHCBCTHHHHHHHHHHH---HHSCSS---------------------
T ss_pred             CcHHHHHHHH-----HHcCCCHHHHHHHHHHHHhhCCchHhHHHHHHHHH---HhcCcc---------------------
Confidence            9988665433     2333  2233331 234557999999865544333   332211                     


Q ss_pred             ccccccCCccEEEEeCcCcCcceeeEEEeecCC
Q psy5293         327 VTEWKTDGRRVALKNSFGFGGTNACLCIAEYKS  359 (359)
Q Consensus       327 ~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~~  359 (359)
                       . .+   .+.++..+||.|.+.++++|+..++
T Consensus       366 -~-~~---Gd~vll~~~G~G~t~~~~~l~~~~~  393 (393)
T 1ted_A          366 -A-KA---ISTGVAFAFGPGVTVEGMLFDIIRR  393 (393)
T ss_dssp             -S-SS---SEEEEEEEEETTTEEEEEEEEECCC
T ss_pred             -C-CC---CCeEEEEEeccchhhhhhheeeccC
Confidence             0 01   4789999999999999999987654

>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A

Probab=99.58  E-value=3.2e-14  Score=134.35  Aligned_cols=233  Identities=15%  Similarity=0.113  Sum_probs=146.0

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCC
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQA  100 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~  100 (359)
                      .+.+++..+|++  .|.++|+.+| |++.||..|+++|++|.++.+||+|+|.+.....   +...+.++      +.+.
T Consensus       107 ~a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~~---~~~~~~~~------~~~~  177 (345)
T 3s21_A          107 TASIVSGNLGVSDHCMTFDVANACLAFINGMDIAARMLERGEIDYALVVDGETANLVYE---KTLERMTS------PDVT  177 (345)
T ss_dssp             HHHHHHHHHTCCTTCEEEECCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCHHHHH---HHHHHHTC------TTCC
T ss_pred             HHHHHHHHhCCCCCceEEeECCcCHHHHHHHHHHHHHHHCCCCCEEEEEEEcccchhhc---cccccccC------Cccc
Confidence            489999999996  6999999999 9999999999999999999999999998654321   12222232      3356


Q ss_pred             CCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhh
Q psy5293         101 SRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQ  180 (359)
Q Consensus       101 ~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~  180 (359)
                      +++|+....++++|||++++++++.+.. ..+.++.+......    .+....          ..+..  .         
T Consensus       178 ~~~f~~~~~~~~~GdGA~A~vl~~~~~~-~~~~~i~~~~~~~~----~~~~~~----------~~~~~--~---------  231 (345)
T 3s21_A          178 EEEFRNELAALTLGCGAAAMVMARSELV-PDAPRYKGGVTRSA----TEWNKL----------CRGNL--D---------  231 (345)
T ss_dssp             HHHHHHHHGGGGBCCEEEEEEEEEGGGS-TTSCEEEEEEEEEC----GGGTTC---------------------------
T ss_pred             hhhhhhhccceeeccceeEEEEecCCCC-CCCcceeeeccccC----cchhhh----------ccccC--c---------
Confidence            6788888889999999999999875431 11223322211110    000000          00000  0         


Q ss_pred             hHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHH
Q psy5293         181 ISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIEL  260 (359)
Q Consensus       181 ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~  260 (359)
                                             .+-+  ++....  ........++++++|++++++++|||++..|-.+...     .
T Consensus       232 -----------------------~~~~--~g~~v~--~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~i-----~  279 (345)
T 3s21_A          232 -----------------------RMVT--DTRLLL--IEGIKLAQKTFVAAKQVLGWAVEELDQFVIHQVSRPH-----T  279 (345)
T ss_dssp             ------------------------------CHHHH--HHHHHHHHHHHHHHHHHHCCCGGGCSEEEECCSCHHH-----H
T ss_pred             -----------------------ceEE--cHHHHH--HHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHHH-----H
Confidence                                   0000  000000  0001234567889999999999999999999776543     3


Q ss_pred             HHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEE
Q psy5293         261 KAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVA  338 (359)
Q Consensus       261 ~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  338 (359)
                      +.+.+.++  ..+++ ... ..+||+.+||-.+.+.+++   ++|.+.                        +   .+..
T Consensus       280 ~~~~~~lgl~~ek~~-~~l-~~~GNt~sasi~~~L~~~~---~~g~~~------------------------~---Gd~v  327 (345)
T 3s21_A          280 AAFVKSFGIDPAKVM-TIF-GEHGNIGPASVPIVLSKLK---ELGRLK------------------------K---GDRI  327 (345)
T ss_dssp             HHHHHHHTCCGGGBC-CCH-HHHCBCGGGHHHHHHHHHH---HHTCCC------------------------T---TCEE
T ss_pred             HHHHHHcCcCHHHce-eeH-hhcCchHHHHHHHHHHHHH---HcCCCC------------------------C---CCEE
Confidence            34444444  22332 122 3569999998666665543   322210                        1   3678


Q ss_pred             EEeCcCcCcceeeEEEe
Q psy5293         339 LKNSFGFGGTNACLCIA  355 (359)
Q Consensus       339 ~~~~~g~gG~~~~~il~  355 (359)
                      +..+||.|-+..+++|+
T Consensus       328 ll~~~G~G~t~~~~~l~  344 (345)
T 3s21_A          328 ALLGIGSGLNCSMAEVV  344 (345)
T ss_dssp             EEEEEETTTEEEEEEEE
T ss_pred             EEEEEChhhhheEEEEE
Confidence            89999998888888875

>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum}

Probab=99.56  E-value=4.1e-15  Score=141.98  Aligned_cols=225  Identities=13%  Similarity=0.132  Sum_probs=143.1

Q ss_pred             CCChHHHHHHHHHcCCCc--cceecc-ccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKV--QTLCVY-CLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~g--p~~~v~-~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|++  +.+++..+|+++  |+++|+ ++| |++.||..|+++|++|.+|.+||+|+|.+...           +.    
T Consensus       130 ~p~~--a~~v~~~lGl~~~~~~~~v~~~aCss~~~al~~A~~~i~~g~~~~vLv~g~e~~s~~-----------~~----  192 (374)
T 2h84_A          130 IPDV--NFKLIDLLGLNKDVERVSLNLMGCLAGLSSLRTAASLAKASPRNRILVVCTEVCSLH-----------FS----  192 (374)
T ss_dssp             SSCH--HHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHTTCTTCEEEEEEEECCGGG-----------CC----
T ss_pred             CCcH--HHHHHHHcCcCCCCceEEecCCcCHHHHHHHHHHHHHHHcCCCCEEEEEEEEecchh-----------hc----
Confidence            4555  899999999997  899997 899 99999999999999999999999999984211           00    


Q ss_pred             CCCCCCCCCccCC--CCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcc
Q psy5293          95 NEPAQASRPFDKR--RDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRI  172 (359)
Q Consensus        95 ~~~~~~~~~fd~~--~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~  172 (359)
                             .+.+..  ..++++|||+++++|++.+.+..+  .++ ++.+.+.....         + .....      .+
T Consensus       193 -------~~~dr~~~~~~~lfGDGA~A~vL~~~~~~~~~--~~~-~l~~~g~~~~~---------~-~~~~~------~~  246 (374)
T 2h84_A          193 -------NTDGGDQMVASSIFADGSAAYIIGCNPRIEET--PLY-EVMCSINRSFP---------N-TENAM------VW  246 (374)
T ss_dssp             -------CSSSHHHHHHHHHBCCEEEEEEEESSCCTTCC--CCE-EEEEEEEEECS---------S-CTTSE------EE
T ss_pred             -------CCCCHHHHhhhhhhccCcEEEEEecCCCcccC--Cce-eEEeeeeEEeC---------C-Ccccc------ee
Confidence                   011111  147899999999999876543212  233 44443310000         0 00000      00


Q ss_pred             cCCcchhhhHHHhccCCCCcccccccccCcccccccCCCcc----CCCCCcChHHHHHHHHHHHHHcC------CCCCCc
Q psy5293         173 LPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHH----LTSPREDGRGALLAMTRALIDAN------LSPGDI  242 (359)
Q Consensus       173 ~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~----~~~p~~~~~~~~~a~~~al~~ag------l~~~dI  242 (359)
                      .                                 ...++..    ...|......+.++++++|+++|      ++++||
T Consensus       247 ~---------------------------------~~~~g~~~~~~~~v~~~~~~~~~~~i~~~L~~ag~~~~~~l~~~di  293 (374)
T 2h84_A          247 D---------------------------------LEKEGWNLGLDASIPIVIGSGIEAFVDTLLDKAKLQTSTAISAKDC  293 (374)
T ss_dssp             E---------------------------------EETTEEEEEECTTHHHHHHHHHHHHHHHHHHHHTTTSCSCCCSSSS
T ss_pred             E---------------------------------EecCcEEEEeCchHHHHHHHHHHHHHHHHHHhcCCccccCCChhhc
Confidence            0                                 0000000    00011112466788999999999      999999


Q ss_pred             cEEEeccCCCCcccHHHHHHHHhhcC--CCCceec-ccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC
Q psy5293         243 SYINAHATSTPLGDVIELKAIGSLFP--AQRLMVS-STKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG  319 (359)
Q Consensus       243 ~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~-~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~  319 (359)
                      |++ .|..+++..|.     +.+.++  ..+++++ .....+||+.+||-...+.+++   ++                 
T Consensus       294 d~~-~H~~~~~i~d~-----~~~~lgl~~~k~~~s~~~~~~~Gnt~sasi~~~L~~~~---~~-----------------  347 (374)
T 2h84_A          294 EFL-IHTGGKSILMN-----IENSLGIDPKQTKNTWDVYHAYGNMSSASVIFVMDHAR---KS-----------------  347 (374)
T ss_dssp             EEE-ECCCCHHHHHH-----HHHHTTCCGGGGHHHHHHHHHHCBCTTHHHHHHHHHHH---TC-----------------
T ss_pred             CEe-ECCCCHHHHHH-----HHHHcCCCHHHHHHHHHHHHHhCCchhhHHHHHHHHHH---hh-----------------
Confidence            999 99999876554     333444  2344432 3345579999888665555443   21                 


Q ss_pred             CCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         320 GYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                           +.    +   .+.++..+||.|-+.++++++.+
T Consensus       348 -----~~----~---Gd~vll~~~G~G~t~~~~ll~~~  373 (374)
T 2h84_A          348 -----KS----L---PTYSISLAFGPGLAFEGCFLKNV  373 (374)
T ss_dssp             -----SC----C---CSEEEEEEEETTTEEEEEEEEEC
T ss_pred             -----cC----C---CCeEEEEEeccchhhhhhhheec
Confidence                 11    2   46788899999888888888865

>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans}

Probab=99.54  E-value=1.5e-13  Score=129.19  Aligned_cols=227  Identities=22%  Similarity=0.272  Sum_probs=137.7

Q ss_pred             CCChHHHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCC
Q psy5293          19 FPNMVPAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNN   95 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~   95 (359)
                      .|++  +.+++..+|+  ++|+++|+++| |++.||..|+++|++|.+|.+||+|+|.+....                 
T Consensus       101 ~p~~--a~~v~~~lgl~~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------------  161 (333)
T 4dfe_A          101 FPST--ACLLQNKLGIRNHGAAFDVQAVCSGFAYAVATADSFIRSGQHRTALVIGAETFSRIL-----------------  161 (333)
T ss_dssp             BSCH--HHHHHHHTTCCSCCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------------
T ss_pred             CCcH--HHHHHHHhCCCCCCcEEEeCcccHHHHHHHHHHHHHHHcCCCCEEEEEEeecccccc-----------------
Confidence            3554  8999999999  57999999999 999999999999999999999999999833211                 


Q ss_pred             CCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCC
Q psy5293          96 EPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPN  175 (359)
Q Consensus        96 ~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  175 (359)
                             .|+++..++++|||++++++++.+     +..+.........    +..+.          +.       .+.
T Consensus       162 -------~~~d~~~~~lfGDGA~A~vl~~~~-----~~~i~~~~~~~~g----~~~~~----------~~-------~~~  208 (333)
T 4dfe_A          162 -------DFKDRTTCVLFGDGAGAVILQASD-----EPGVLASALHADG----SHSNI----------LC-------TPG  208 (333)
T ss_dssp             -------CTTCTTTTTTBCEEEEEEEEEEES-----SCSEEEEEEEECG----GGGGG----------EE-------BCE
T ss_pred             -------CcccccceeeeccccEEEEEEEcC-----CCCeEEEEEEEcc----CCcCe----------EE-------ECC
Confidence                   123344678899999999998753     2233322111110    00000          00       000


Q ss_pred             cchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcc
Q psy5293         176 MSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLG  255 (359)
Q Consensus       176 ~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~  255 (359)
                      .+...     ..          ...+  .+-+  ++...  +........++++++|++++++++|||++..|-.+... 
T Consensus       209 ~~~~~-----~~----------~~~~--~~~~--~g~~v--~~~~~~~~~~~i~~~l~~~gl~~~did~~~~Hq~~~~i-  266 (333)
T 4dfe_A          209 NVNGG-----VV----------SGSA--FLHM--DGQAV--FKLAVNVLEKVAVEALEKANLSAEQIDWLIPHQANIRI-  266 (333)
T ss_dssp             EEETT-----EE----------EECC--SCEE--CHHHH--HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHHH-
T ss_pred             CCCCc-----cc----------ccCc--ceee--ccHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHHH-
Confidence            00000     00          0000  0000  00000  00111455678899999999999999999999776653 


Q ss_pred             cHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccC
Q psy5293         256 DVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTD  333 (359)
Q Consensus       256 d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (359)
                          .+.+.+.++  ..++..  ....+||+.+||=.+.+.++   ++++.+                         +  
T Consensus       267 ----~~~~~~~lgl~~~~~~~--~l~~~GNt~sasi~~~L~~~---~~~g~~-------------------------~--  310 (333)
T 4dfe_A          267 ----MQSTCRKLGLPQERMIV--TVGEHGNTSAASIPLALDVA---VRDGRI-------------------------K--  310 (333)
T ss_dssp             ----HHHHHHHTTCCGGGBCC--CHHHHCBCGGGHHHHHHHHH---HHTTCS-------------------------C--
T ss_pred             ----HHHHHHHhCCCHHHhhh--hHHhcCchHHHHHHHHHHHH---HHcCCC-------------------------C--
Confidence                344444454  223333  23356999999855544443   443221                         1  


Q ss_pred             CccEEEEeCcCcCcceeeEEEe
Q psy5293         334 GRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       334 ~~~~~~~~~~g~gG~~~~~il~  355 (359)
                      ..+..+..+||.|-+-++++++
T Consensus       311 ~Gd~vll~~~G~G~t~~~~ll~  332 (333)
T 4dfe_A          311 RGQNVLIEGVGGGFTWGASVIR  332 (333)
T ss_dssp             TTCEEEEEEEETTTEEEEEEEE
T ss_pred             CCCEEEEEEEchhheeEEEEEE
Confidence            1357788889998888888875

>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana}

Probab=99.53  E-value=2.2e-14  Score=153.08  Aligned_cols=244  Identities=13%  Similarity=0.084  Sum_probs=150.3

Q ss_pred             cCCChHHHHHHHHHcCCCcc---ceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccC
Q psy5293          18 FFPNMVPAGAISIDMDSKVQ---TLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQF   93 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~gp---~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~   93 (359)
                      .+|++  +.+|+..||++++   ++.++++| +++.||..|.++|++|.+|.+||+|+|.+...+               
T Consensus       723 ~~p~~--a~~v~~~lGl~~~~~~~~~v~~aCsg~~~Al~~A~~~i~sG~~~~vLvvg~e~~~~~~---------------  785 (979)
T 3tsy_A          723 EMPGA--DYKLANLLGLEPSVRRVMLYHQGCYAGGTVLRTAKDLAENNAGARVLVVCSEITVVTF---------------  785 (979)
T ss_dssp             CSSCH--HHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEECTTTTC---------------
T ss_pred             CCCcH--HHHHHHHcCCCcccEEEeeeccccHhHHHHHHHHHHHHHhCCCCEEEEEEEEecchhe---------------
Confidence            34554  9999999999874   59999999 999999999999999999999999999732111               


Q ss_pred             CCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhccc
Q psy5293          94 NNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRIL  173 (359)
Q Consensus        94 ~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  173 (359)
                         .+.....++...+++++|||+++++|++.+.+..++..++....+...... .        .   ....+..     
T Consensus       786 ---~~~~~~~~~~~~~~~lfGDGA~A~vL~~~~~~~~~~~~~~~~~~~~~~~~~-~--------~---~~~~~~~-----  845 (979)
T 3tsy_A          786 ---RGPSEDALDSLVGQALFGDGSAAVIVGSDPDISIERPLFQLVSAAQTFIPN-S--------A---GAIAGNL-----  845 (979)
T ss_dssp             ---CCCCSSCHHHHHHHHHBCCEEEEEEEESSCCSSSCCCCEEEEEEEEEECTT-C--------T---TSEEEEE-----
T ss_pred             ---eCCCccCHHHHhhhhhccCceEEEEEecCCCccccCcceEEEeeeeEEecC-c--------h---hheEEEE-----
Confidence               001112222223457899999999998865543344555544443321000 0        0   0000000     


Q ss_pred             CCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCC
Q psy5293         174 PNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTP  253 (359)
Q Consensus       174 ~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~  253 (359)
                                              ...+.  ..+    .....+........++++++|+++|++++|||+++.|..++.
T Consensus       846 ------------------------~~~~~--~~~----~~~~v~~~~~~~~~~~~~~al~~agl~~~did~~~~Hq~~~~  895 (979)
T 3tsy_A          846 ------------------------REVGL--TFH----LWPNVPTLISENVEKCLTQAFDPLGISDWNSLFWIAHPGGPA  895 (979)
T ss_dssp             ------------------------ETTEE--EEE----ECTTHHHHHHHHHHHHHHHHHGGGTCCCGGGSEEEECCSCHH
T ss_pred             ------------------------ecCce--EEE----EchHHHHHHHHHHHHHHHHHHhhcCCCCcccceEEECCCChH
Confidence                                    00000  000    000001111244678899999999999999999999998876


Q ss_pred             cccHHHHHHHHhhcC--CCCceec-ccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCccccc
Q psy5293         254 LGDVIELKAIGSLFP--AQRLMVS-STKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEW  330 (359)
Q Consensus       254 ~~d~~E~~al~~~~~--~~~~~v~-~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~  330 (359)
                      ..|..+     +.++  ..++..+ ..-..+||+.+||=.+.+.++...++.|..                      - .
T Consensus       896 i~~~~~-----~~lgl~~~k~~~~~~~l~~~GNtssasi~~~L~~~~~~~~~G~~----------------------v-~  947 (979)
T 3tsy_A          896 ILDAVE-----AKLNLDKKKLEATRHVLSEYGNMSSACVLFILDEMRKKSLKGER----------------------A-T  947 (979)
T ss_dssp             HHHHHH-----HHHTCCTTTTHHHHHHHHHHCBCTTHHHHHHHHHHHHHHHHTTC----------------------S-B
T ss_pred             HHHHHH-----HHcCCChHHHHHHHHHHHHcCCcchhhHHHHHHHHHhhhccccc----------------------c-c
Confidence            544433     3333  3333332 112346999999988777777665543211                      0 0


Q ss_pred             ccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         331 KTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       331 ~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                      ...+...++..+||.|-+.++++++-
T Consensus       948 ~g~~~~~~ll~~~G~G~t~~~~~l~~  973 (979)
T 3tsy_A          948 TGEGLDWGVLFGFGPGLTIETVVLHS  973 (979)
T ss_dssp             TTTTCSEEEEEEECGGGEEEEEEEEC
T ss_pred             CCCCcceeEEEEeCCchHHHHHHHHh
Confidence            11234678999999988888888874

>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A*

Probab=99.45  E-value=2.6e-13  Score=130.38  Aligned_cols=216  Identities=14%  Similarity=0.039  Sum_probs=134.6

Q ss_pred             cCCChHHHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          18 FFPNMVPAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      ..+++  +.+++..+|++  .|+++|+++| ||+.||..|.++|++|.+|.+||+|+|. ....                
T Consensus        84 ~~p~~--a~~v~~~lGl~~~~~~~~v~~aC~sg~~Al~~A~~~I~sg~~~~vLvvg~e~-s~~~----------------  144 (396)
T 1xpm_A           84 AAKAA--AVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDT-ARYG----------------  144 (396)
T ss_dssp             SSSCH--HHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEE-ECCC----------------
T ss_pred             CCCCH--HHHHHHHhCCCCCceEEEeccccHHHHHHHHHHHHHHHcCCCCEEEEEeehh-hccc----------------
Confidence            34555  89999999997  4999999999 9999999999999999999999999995 1110                


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                               ++ .+.++++|||++++++++.       ..++....+.+..           .+.......|..      
T Consensus       145 ---------~~-~~~~~~~GdGA~A~vl~~~-------~~i~~~~~~~g~~-----------~~d~~~~~~p~~------  190 (396)
T 1xpm_A          145 ---------LN-SGGEPTQGAGAVAMVIAHN-------PSILALNEDAVAY-----------TEDVYDFWRPTG------  190 (396)
T ss_dssp             ---------TT-CSSGGGCEEEEEEEEEEES-------CSSEEECSCCEEE-----------ECCCCSEECBTT------
T ss_pred             ---------cC-CCCCcccccceEEEEeccC-------CceEEEEeccccc-----------cceEEEeeccCC------
Confidence                     11 1358899999999999753       2343333321100           000000000000      


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChH--------HHHHHHHHHHHHcCCCCCCccEEE
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGR--------GALLAMTRALIDANLSPGDISYIN  246 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~--------~~~~a~~~al~~agl~~~dI~~ie  246 (359)
                                                         ..    .+...+.        ...+++++++++++++++|||++.
T Consensus       191 -----------------------------------~~----~~~~~G~~~~~~~~~~~~~~~~~~L~~agl~~~did~~~  231 (396)
T 1xpm_A          191 -----------------------------------HK----YPLVDGALSKDAYIRSFQQSWNEYAKRQGKSLADFASLC  231 (396)
T ss_dssp             -----------------------------------CS----SCEECHHHHHHHHHHHHHHHHHHHHHHHTCCGGGCSEEE
T ss_pred             -----------------------------------CC----CeEEEcHHHHHHHHHHHHHHHHHHHHHcCCCHHHCCEEE
Confidence                                               00    0111222        267789999999999999999999


Q ss_pred             eccCCCCcccHHHHHHHHhhcC--CCCce--e---cccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCC
Q psy5293         247 AHATSTPLGDVIELKAIGSLFP--AQRLM--V---SSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAG  319 (359)
Q Consensus       247 ~h~~~t~~~d~~E~~al~~~~~--~~~~~--v---~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~  319 (359)
                      .|..+++..+......+....+  ..++.  +   ......+||+.+||-...+..++..   +.+              
T Consensus       232 ~H~~~~~~~~~~~~~l~~~~~~~~~e~~~~~~~~s~~~~~~~GN~~saSi~l~L~~~l~~---~~l--------------  294 (396)
T 1xpm_A          232 FHVPFTKMGKKALESIIDNADETTQERLRSGYEDAVDYNRYVGNIYTGSLYLSLISLLEN---RDL--------------  294 (396)
T ss_dssp             ECCSSHHHHHHHHHTTGGGSCHHHHHHHHHHHHHHTTGGGGTCCCGGGHHHHHHHHHHHH---SCC--------------
T ss_pred             ecCCchHHHHHHHHHHHhhcccCCHHHHHHHhhhhhhhhhhcCchHHHHHHHHHHHHHHc---CCC--------------
Confidence            9999987655443221111000  00110  0   1112457999999877766665432   221              


Q ss_pred             CCCCCCcccccccCCccEEEEeCcCcCcceeeEEEe
Q psy5293         320 GYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       320 ~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~  355 (359)
                                .+   .+.++..+||.|-+...++++
T Consensus       295 ----------~~---Gd~ill~s~GsG~~~~~~~~~  317 (396)
T 1xpm_A          295 ----------QA---GETIGLFSYGSGSVGEFYSAT  317 (396)
T ss_dssp             ----------CT---TCEEEEEEEETTTEEEEEEEE
T ss_pred             ----------CC---CCEEEEEEECcchhheEEEEE
Confidence                      01   367888899876555555554

>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae}

Probab=99.44  E-value=7.4e-12  Score=116.98  Aligned_cols=225  Identities=16%  Similarity=0.190  Sum_probs=134.9

Q ss_pred             CCChHHHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCC
Q psy5293          19 FPNMVPAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNE   96 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~   96 (359)
                      .|++  +.+++..+|++ .|+++|+.+| |++.||..|.++|++|.++.+||+|+|.+....           .      
T Consensus        94 ~p~~--a~~v~~~lGl~~~~~~~v~~~C~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~------  154 (323)
T 3il3_A           94 YPSA--ACQVQGLLNIDDAISFDLAAACTGFVYALSVADQFIRAGKVKKALVIGSDLNSRKL-----------D------  154 (323)
T ss_dssp             SSCH--HHHHHHHTTCSSCEEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGSC-----------C------
T ss_pred             CccH--HHHHHHHhCCCCccEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEEeecccccc-----------C------
Confidence            4555  89999999996 5999999999 999999999999999999999999999833110           0      


Q ss_pred             CCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCc
Q psy5293          97 PAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNM  176 (359)
Q Consensus        97 ~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  176 (359)
                             +.++...+++|||++|+++++.+     ...+.........    ++.          ..+   .    .+..
T Consensus       155 -------~~d~~~~~lfGDGA~A~vl~~~~-----~~~i~~~~~~s~g----~~~----------~~~---~----~~g~  201 (323)
T 3il3_A          155 -------ETDRSTVVLFGDGAGAVILEASE-----QEGIISTHLHASA----DKN----------NAL---V----LAQP  201 (323)
T ss_dssp             -------TTCTTTTTTBCEEEEEEEEEEES-----SCCEEEEEEEECC----CCS----------CSE---E----CCCC
T ss_pred             -------ccccccccccccceEEEEEEEcC-----CCCeEEEEEEEcC----CCc----------ceE---E----ECCC
Confidence                   12223567899999999998643     2233222211110    000          000   0    0000


Q ss_pred             chhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCccc
Q psy5293         177 SAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGD  256 (359)
Q Consensus       177 ~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d  256 (359)
                      .          . |.        .....+-+  ++...  +........++++++|++++++++|||++..|-.+..   
T Consensus       202 ~----------~-~~--------~~~~~~~~--~g~~v--~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~---  255 (323)
T 3il3_A          202 E----------R-GI--------EKSGYIEM--QGNET--FKLAVRELSNVVEETLLANNLDKKDLDWLVPHQANLR---  255 (323)
T ss_dssp             C----------T-TC--------SSCSCCEE--CHHHH--HHHHHHHHHHHHHHHHHTTTCCTTTCCEEEECCSCHH---
T ss_pred             C----------C-CC--------CCCCcEEE--cCHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEEcCCCHH---
Confidence            0          0 00        00000000  00000  0000133456788999999999999999988866543   


Q ss_pred             HHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCC
Q psy5293         257 VIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDG  334 (359)
Q Consensus       257 ~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (359)
                        -.+.+.+.++  ..++.. .. ..+||+.+||=.+.+.++   +++|.+                        .+   
T Consensus       256 --i~~~~~~~lgl~~ek~~~-~l-~~~GNt~sasi~~~L~~~---~~~g~~------------------------~~---  301 (323)
T 3il3_A          256 --IITATAKKLEMDMSQVVV-TL-DKYANNSAATVPVALDEA---IRDGRI------------------------QR---  301 (323)
T ss_dssp             --HHHHHHHHTTCCGGGBCC-CH-HHHCBCGGGHHHHHHHHH---HHTTSS------------------------CT---
T ss_pred             --HHHHHHHHcCcCHHHhhc-cH-hhcCchHHHHHHHHHHHH---HHcCCC------------------------CC---
Confidence              3345555554  223332 22 345999999855554443   443222                        01   


Q ss_pred             ccEEEEeCcCcCcceeeEEEe
Q psy5293         335 RRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       335 ~~~~~~~~~g~gG~~~~~il~  355 (359)
                      .+..+..+||.|-+-++++++
T Consensus       302 Gd~vll~~~G~G~t~~~~~l~  322 (323)
T 3il3_A          302 GQLLLLEAFGGGWTWGSALVR  322 (323)
T ss_dssp             TCEEEEEEEETTTEEEEEEEE
T ss_pred             CCEEEEEEEehhheeEEEEEE
Confidence            367888899999888888876

>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A

Probab=99.32  E-value=5e-11  Score=113.20  Aligned_cols=81  Identities=17%  Similarity=0.162  Sum_probs=65.7

Q ss_pred             CCChHHHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCC
Q psy5293          19 FPNMVPAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNN   95 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~   95 (359)
                      .|++  +.+++..+|++  .|.+.|+.+| |++.||..|.++|++|.++.+||+|+|.++...           .     
T Consensus       116 ~p~~--a~~v~~~lGl~~~~~~~~v~~~C~s~~~Al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~-----  177 (365)
T 3gwa_A          116 LPTS--ACMLQHRLGIPTHAGALDVNLGCSGYVYGLSLAKGLVETGAARCVLLLTADTYSKYL-----------H-----  177 (365)
T ss_dssp             BSCH--HHHHHHHTTCCTTSEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGS-----------C-----
T ss_pred             CCcH--HHHHHHHcCCCCCceEEEecccChHHHHHHHHHHHHHHcCCCCEEEEEEEchhhccC-----------C-----
Confidence            4555  88999999997  5999999999 999999999999999999999999999843221           0     


Q ss_pred             CCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          96 EPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        96 ~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                       +       .++....++|||++|+++++.
T Consensus       178 -~-------~dr~~~~lfGDGAaA~vl~~~  199 (365)
T 3gwa_A          178 -P-------LDKSVRTLFGDGASATAVIAE  199 (365)
T ss_dssp             -T-------TCHHHHTTBCCEEEEEEEEEE
T ss_pred             -c-------ccccccccccceeEEEEEEec
Confidence             1       111234679999999999864

>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A*

Probab=99.30  E-value=5.9e-11  Score=112.43  Aligned_cols=238  Identities=13%  Similarity=0.118  Sum_probs=134.1

Q ss_pred             CCChHHHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCC
Q psy5293          19 FPNMVPAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNE   96 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~   96 (359)
                      .|++  +.+++..+|++. |.+.|+.+| |++.||..|.++|++|.++.+||+|+|.+....           .      
T Consensus       110 ~p~~--a~~v~~~lGl~~~~~~~v~~aC~s~~~Al~~A~~~i~sG~~~~vLvvg~e~~S~~~-----------~------  170 (359)
T 3h78_A          110 DPSQ--ACLIQPLLGLRHIPVLDIRAQASGLLYGLQMARGQILAGLARHVLVVCGEVLSKRM-----------D------  170 (359)
T ss_dssp             BSCH--HHHHHHHHTCCSCCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEECGGGC-----------C------
T ss_pred             CCcH--HHHHHHHcCCCCCcEEEECCHhHHHHHHHHHHHHHHHCCCcCEEEEEEEchhcccC-----------C------
Confidence            4554  899999999975 999999999 999999999999999999999999999843221           0      


Q ss_pred             CCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCc
Q psy5293          97 PAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNM  176 (359)
Q Consensus        97 ~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~  176 (359)
                      +...     .+...+++|||++|+++++.+.   .+..+.........    ++.+....-...... .|+.        
T Consensus       171 ~~d~-----~~~t~~lfGDGAaA~vl~~~~~---~~~~i~~~~~~s~g----~~~~~~~~~~~g~~~-~~~~--------  229 (359)
T 3h78_A          171 CSDR-----GRNLSILLGDGAGAVVVSAGES---LEDGLLDLRLGADG----NYFDLLMTAAPGSAS-PTFL--------  229 (359)
T ss_dssp             CSTT-----THHHHTTBCEEEEEEEEECCSC---SSSEEEEEEEEECG----GGGGGEEBCCSSTTS-SSTT--------
T ss_pred             cccc-----cccccceecceeEEEEEEecCC---CCCceEEEEEEEcc----CccceEEeCCCCCcc-CCcc--------
Confidence            0000     0123467999999999986431   12233322222110    000000000000000 0000        


Q ss_pred             chhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCccc
Q psy5293         177 SAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGD  256 (359)
Q Consensus       177 ~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d  256 (359)
                      . +....  .            ..+  .+-+  ++...  +........++++++|++++++++|||++..|-.+..   
T Consensus       230 ~-~~~~~--~------------~~~--~~~m--~g~~v--~~~~~~~~~~~i~~~L~~~gl~~~did~~v~Hq~n~~---  285 (359)
T 3h78_A          230 D-ENVLR--E------------GGG--EFLM--RGRPM--FEHASQTLVRIAGEMLAAHELTLDDIDHVICHQPNLR---  285 (359)
T ss_dssp             C-HHHHH--T------------TTT--SCEE--CHHHH--HHHHHHHHHHHHHHHHHHTTCCGGGCSEEEECCSCHH---
T ss_pred             c-ccccc--c------------cCC--ceEe--ccHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEECCCCHH---
Confidence            0 00000  0            000  0000  00000  0000134557889999999999999999888866544   


Q ss_pred             HHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCC
Q psy5293         257 VIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDG  334 (359)
Q Consensus       257 ~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (359)
                        -.+.+.+.++  ..+++.+ . ..+||+.+||=.+.+.++   +++                           .+  .
T Consensus       286 --i~~~~~~~lgl~~ek~~~~-l-~~~GNt~sAsi~l~L~~~---~~~---------------------------l~--~  329 (359)
T 3h78_A          286 --ILDAVQEQLGIPQHKFAVT-V-DRLGNMASASTPVTLAMF---WPD---------------------------IQ--P  329 (359)
T ss_dssp             --HHHHHHHHHTCCGGGBCCC-H-HHHCBCGGGHHHHHHHHH---GGG---------------------------SC--T
T ss_pred             --HHHHHHHHhCcCHHHhhhh-h-hcccchHHHHHHHHHHHH---HHh---------------------------CC--C
Confidence              2344444444  2233332 2 345999999855554443   221                           01  1


Q ss_pred             ccEEEEeCcCcCcceeeEEEee
Q psy5293         335 RRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       335 ~~~~~~~~~g~gG~~~~~il~~  356 (359)
                      .+..+..+||.|-+-++++|+-
T Consensus       330 Gd~vll~~fG~G~t~~~~ll~~  351 (359)
T 3h78_A          330 GQRVLVLTYGSGATWGAALYRK  351 (359)
T ss_dssp             TCEEEEEEEETTTEEEEEEEEC
T ss_pred             CCEEEEEEEchhhhheeeeEEe
Confidence            3578888899988888888873

>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris}

Probab=99.28  E-value=2.7e-11  Score=116.05  Aligned_cols=83  Identities=20%  Similarity=0.384  Sum_probs=68.1

Q ss_pred             cCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCC
Q psy5293          18 FFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNE   96 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~   96 (359)
                      .+|++  +.+++..+|++.|+++|+.+| +++.||..|.++|++|.++.+||+|+|.+....           .      
T Consensus       152 ~~p~~--a~~v~~~LGl~~~~~dv~~aC~g~~~aL~~A~~~i~~g~~~~vLvvg~E~~S~~~-----------d------  212 (392)
T 3led_A          152 AYPAM--AIEVQNALGLGGFAFDMNVACSSATFGLKTAADFVGGGSVDAVLMVNPEICSGHL-----------N------  212 (392)
T ss_dssp             SBSCH--HHHHHHHTTCCSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGGC-----------C------
T ss_pred             CccHH--HHHHHHHhCCCCeEEEECCccHHHHHHHHHHHHHHHCCCCCEEEEEeehhcCCcC-----------C------
Confidence            34655  899999999988999999999 999999999999999999999999999732111           0      


Q ss_pred             CCCCCCCccCCCCCceecceeeEEeecchH
Q psy5293          97 PAQASRPFDKRRDGFVMGEGSAILVLEELD  126 (359)
Q Consensus        97 ~~~~~~~fd~~~~G~~~geGa~a~~l~~~~  126 (359)
                             +.++...+++|||++|+++++.+
T Consensus       213 -------~~dr~t~~lFGDGA~A~vl~~~~  235 (392)
T 3led_A          213 -------FRDRDSHFIFGDVATAAIVERAD  235 (392)
T ss_dssp             -------TTCTTTTTTBCEEEEEEEEEEGG
T ss_pred             -------cCcccCCcccccccEEEEEEecC
Confidence                   12223578899999999998653

>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans}

Probab=99.26  E-value=1.1e-10  Score=110.42  Aligned_cols=237  Identities=18%  Similarity=0.122  Sum_probs=134.5

Q ss_pred             CCChHHHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCC
Q psy5293          19 FPNMVPAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNN   95 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~   95 (359)
                      .|++  +.+++..+|++  .|.++|+.+| |++.||..|.++|++|.++.+||+|+|.+....           .     
T Consensus       102 ~p~~--a~~v~~~lGl~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~-----  163 (354)
T 4efi_A          102 LPAT--AFVLQAELDLPASCLALDINLGCSGYPQALWLGMNLIQTGAAKRVLLAVGDTISKMI-----------D-----  163 (354)
T ss_dssp             SSCH--HHHHHHHTTCCTTSEEEEECCCTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGGC-----------C-----
T ss_pred             CCcH--HHHHHHHcCcCCCccEEeeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEechhcccC-----------C-----
Confidence            4555  89999999993  5999999999 999999999999999999999999999833211           0     


Q ss_pred             CCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCC
Q psy5293          96 EPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPN  175 (359)
Q Consensus        96 ~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~  175 (359)
                              ++++....++|||++|+++++...    ...+...+...+     +..+. .......  .+|.....    
T Consensus       164 --------~~d~~~~~lfGDGA~A~vl~~~~~----~~~~~~~~~s~g-----~~~~~-~~~~~~g--~~p~~~~~----  219 (354)
T 4efi_A          164 --------PTDRSTSLLFGDAGTMTALETSNG----DAAAHFIIGADG-----KGARN-LIVPSGG--FKPYDAAA----  219 (354)
T ss_dssp             --------TTCHHHHTTBCCEEEEEEEEECCS----CCEEEEEEEECG-----GGGGG-EECCSSS--SSCCCGGG----
T ss_pred             --------ccccccccccccceeEEEEeecCC----CCceEEEEEEcC-----CCcce-EEecCCC--CCCCcccc----
Confidence                    111223577999999999986421    111111111111     00000 0000000  00000000    


Q ss_pred             cchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcc
Q psy5293         176 MSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLG  255 (359)
Q Consensus       176 ~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~  255 (359)
                             ...+.           ......+-+  ++...  +........++++++|++++++++|||++..|-.+..  
T Consensus       220 -------~~~~~-----------~~~~~~~~~--~g~~v--~~~~~~~~~~~i~~~l~~~gl~~~did~~v~Hq~~~~--  275 (354)
T 4efi_A          220 -------DERMA-----------GKSPECLFM--DGGEI--FNFTLNAVPKLVSRTLDIAGRDKDSYDAFLFHQANLF--  275 (354)
T ss_dssp             -------CGGGT-----------TCCTTSCEE--CHHHH--HHHHHHHHHHHHHHHHHHHTCCGGGCSEEEECCCCHH--
T ss_pred             -------ccccc-----------cccccceEE--ccHHH--HHHHHHHHHHHHHHHHHHcCCCHHHCCEEEeCCCCHH--
Confidence                   00000           000000000  00000  0000134456788999999999999999998865543  


Q ss_pred             cHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccC
Q psy5293         256 DVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTD  333 (359)
Q Consensus       256 d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~  333 (359)
                         -.+.+.+.++  ..+++. . -..+||+.+||=.+.+.+++..   +.+                         +  
T Consensus       276 ---i~~~~~~~Lgl~~ek~~~-~-l~~~GNt~sasi~~~L~~~~~~---g~~-------------------------~--  320 (354)
T 4efi_A          276 ---MLKHLAKKAGLPAERVPV-N-IGEYGNTSCASIPLLITTELKD---RLK-------------------------E--  320 (354)
T ss_dssp             ---HHHHHHHHTTCCGGGSCC-C-HHHHCBCGGGHHHHHHHHHSHH---HHH-------------------------H--
T ss_pred             ---HHHHHHHHhCcCHHHHHH-H-HhhhCcHHHHHHHHHHHHHHHh---CCC-------------------------C--
Confidence               3444555554  223322 2 2456999999866555544332   111                         1  


Q ss_pred             CccEEEEeCcCcCcceeeEEEee
Q psy5293         334 GRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       334 ~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                      ..+..+..+||.|-+-++++++-
T Consensus       321 ~Gd~vll~~fG~G~t~~~~ll~~  343 (354)
T 4efi_A          321 ETLQLGMFGFGVGYSWASAALAV  343 (354)
T ss_dssp             SCEEEEEEEEETTTEEEEEEEEE
T ss_pred             CCCEEEEEEEchhhhheeeEEEE
Confidence            13678889999998988888874

>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A

Probab=99.23  E-value=5.6e-11  Score=114.69  Aligned_cols=242  Identities=14%  Similarity=0.181  Sum_probs=143.7

Q ss_pred             CCChHHHHHHHHHcCCCcc---ceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQ---TLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp---~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|++  +.+++..+|++++   .++|+++| |++.||..|.++|++|.+|.+||+|+|.+...+          ..    
T Consensus       160 ~p~~--a~~v~~~lGl~~~~~~~~~v~~aCas~~~AL~~A~~~i~~G~~~~vLvvg~E~~s~~~----------~~----  223 (413)
T 1xes_A          160 LPGA--DFEVAKLLGLHPSVKRVGVFQHGCFAGGTVLRMAKDLAENNRGARVLVICSETTAVTF----------RG----  223 (413)
T ss_dssp             ESCH--HHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCCEEEEEEECTTTTC----------CC----
T ss_pred             cchH--HHHHHHHcCcCCccchhceecCccHHHHHHHHHHHHHHHcCCCCEEEEEEehhhhhhh----------cC----
Confidence            4555  8899999999874   88999999 999999999999999999999999999844311          01    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcC-CcEEEEEeecccccchhhhhhhhhhcccccccCcchhhccc
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARS-ANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRIL  173 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g-~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~  173 (359)
                        |..  ++|+....++++|||+++++|++.+..   + ......+...+.......       ++   ...      + 
T Consensus       224 --~~d--~~~~~~~~~~lfGDGA~A~vl~~~~~~---~~~~~~~~l~~~~~~~~p~~-------~~---~~~------~-  279 (413)
T 1xes_A          224 --PSE--THLDSLVGQALFGDGASALIVGADPIP---QVEKACFEIVWTAQTVVPNS-------EG---AIG------G-  279 (413)
T ss_dssp             --CCT--TCHHHHHHHHHBCCEEEEEEEESSCCT---TTSCCSEEEEEEEEEECTTC-------TT---TEE------E-
T ss_pred             --CCc--cchhhcccceeEecccEEEEEecCCCc---cccCCceEEEeeeeEEcCCC-------hh---hcC------c-
Confidence              111  345556678999999999999864321   1 000122222220000000       00   000      0 


Q ss_pred             CCcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCC-CCCccEEEeccCCC
Q psy5293         174 PNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLS-PGDISYINAHATST  252 (359)
Q Consensus       174 ~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~-~~dI~~ie~h~~~t  252 (359)
                            .+    .            ..|. .+-+..     ..+........++++++|++++++ .+|| ++..|-.+.
T Consensus       280 ------~~----~------------~~g~-~~~~~~-----~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~  330 (413)
T 1xes_A          280 ------KV----R------------EVGL-TFQLKG-----AVPDLISANIENCMVEAFSQFKISDWNKL-FWVVHPGGR  330 (413)
T ss_dssp             ------EE----E------------TTEE-EEEECT-----THHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCH
T ss_pred             ------EE----e------------cCce-EEEecc-----cHHHHHHHHHHHHHHHHHHhcCCCCccce-eEEECCCCH
Confidence                  00    0            0000 000000     001111245567888999999998 7777 788886654


Q ss_pred             CcccHHHHHHHHhhcC--CCCceec-ccccccchHHHhHHHHHHHHHHHHH-hcCCCCCCCCCCCCCccCCCCCCCCccc
Q psy5293         253 PLGDVIELKAIGSLFP--AQRLMVS-STKGAHGHLLGAAGNLESAFTILAV-HEGLVPPNVNLEDPCEEAGGYECPTAVT  328 (359)
Q Consensus       253 ~~~d~~E~~al~~~~~--~~~~~v~-~~k~~~Gh~~~AsG~~~~~~~~~~l-~~~~ip~~~~~~~~~~~~~~~~~~~~~~  328 (359)
                      .     -.+.+.+.++  ..++..+ .....+||+.+||-.+.+.+++..= +.|.+                      .
T Consensus       331 ~-----i~~~~~~~Lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~----------------------~  383 (413)
T 1xes_A          331 A-----ILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRKASLQNGCS----------------------T  383 (413)
T ss_dssp             H-----HHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCS----------------------B
T ss_pred             H-----HHHHHHHHcCCChHHhHHHHHHHHhcCcCchhhHHHHHHHHHHhccccCCC----------------------C
Confidence            3     3334445554  2334332 2334579999999777777665432 11100                      0


Q ss_pred             ccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         329 EWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       329 ~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                        +.++...++..+||.|-+..+++|+..+
T Consensus       384 --~G~~~d~vll~~fG~G~t~~~~ll~~~~  411 (413)
T 1xes_A          384 --TGEGLEMGVLFGFGPGLTIETVVLKSVP  411 (413)
T ss_dssp             --TTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred             --CCCCcceEEEEEecCCcEEeEEEEEecc
Confidence              0011368899999999888899988654

>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A*

Probab=99.19  E-value=8.6e-10  Score=102.85  Aligned_cols=81  Identities=17%  Similarity=0.255  Sum_probs=66.5

Q ss_pred             CCChHHHHHHHHHcCCC-ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCC
Q psy5293          19 FPNMVPAGAISIDMDSK-VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNE   96 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~   96 (359)
                      .|++  +.+++..+|++ .|.++|+.+| |++.||..|.++|++|.++.+||+|+|.+....           .      
T Consensus        88 ~p~~--a~~v~~~lGl~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~-----------~------  148 (321)
T 3il6_A           88 MPSV--ACQVQGAIGATEAFAFDISAACSGFVYALSMAEKLVLSGRYQTGLVIGGETFSKML-----------D------  148 (321)
T ss_dssp             SSCH--HHHHHHHTTCTTCEEEEECCGGGHHHHHHHHHHHHHHTSSCCCEEEEEEECGGGGS-----------C------
T ss_pred             CCcH--HHHHHHHcCCCCceEEEeCcccHHHHHHHHHHHHHHHCCCCCEEEEEEEccccccC-----------C------
Confidence            4554  89999999997 5999999999 999999999999999999999999999843111           0      


Q ss_pred             CCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          97 PAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        97 ~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                             +.++...+++|||++|+++++.
T Consensus       149 -------~~dr~~~~lfGDGA~A~vl~~~  170 (321)
T 3il6_A          149 -------WTDRSTAVLFGDGAAGVLIEAA  170 (321)
T ss_dssp             -------TTCTTTGGGBCCEEEEEEEEEE
T ss_pred             -------ccccccceeeccccEEEEEEEc
Confidence                   1223356789999999999864

>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A

Probab=99.18  E-value=2.4e-10  Score=109.32  Aligned_cols=243  Identities=14%  Similarity=0.153  Sum_probs=140.1

Q ss_pred             CCChHHHHHHHHHcCCCcc---ceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQ---TLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp---~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|++  +.+++..+|++++   .++++++| |++.||..|.++|++|.++.+||+|+|.+...+          ..    
T Consensus       133 ~p~~--a~~v~~~lGl~~~~~~~~~v~~aC~s~~~al~~A~~~i~~g~~~~vLvvg~e~~s~~~----------~~----  196 (387)
T 3a5r_A          133 MPGA--DYQLTKLLDLDPSVKRFMFYHLGCYAGGTVLRLAKDIAENNKGARVLIVCSEMTTTCF----------RG----  196 (387)
T ss_dssp             ESCH--HHHHHHHTTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECCTTTC----------CC----
T ss_pred             CCcH--HHHHHHHcCcCCCcceeeeEccccHHHHHHHHHHHHHHHhCCCCEEEEEEEeccchhh----------cC----
Confidence            4554  8999999999874   88999999 999999999999999999999999999843211          00    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                        |..  ..++....++++|||+++++|++.+..  .......++...+.......       +   ....      +  
T Consensus       197 --~~d--~~~~~~~~~~lfGDGA~A~vl~~~~~~--~~~~~~~~l~~~~~~~~p~~-------~---~~~~------~--  252 (387)
T 3a5r_A          197 --PSE--THLDSMIGQAILGDGAAAVIVGADPDL--TVERPIFELVSTAQTIVPES-------H---GAIE------G--  252 (387)
T ss_dssp             --CCS--SCCSSTTHHHHBCCEEEEEEEESSCCT--TTCCCCEEEEEEEEEECTTC-------T---TSEE------E--
T ss_pred             --CCc--cchhhccccceeccceeEEEEecCCCc--cccCCceEEEeeeEEEeCCC-------h---HhcC------c--
Confidence              111  111223457899999999999764321  00110122322210000000       0   0000      0  


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCC-CCCccEEEeccCCCC
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLS-PGDISYINAHATSTP  253 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~-~~dI~~ie~h~~~t~  253 (359)
                           .    +.            ..|. .+-+..     ..+........++++++|++++++ .+|| ++..|-.+..
T Consensus       253 -----~----~~------------~~g~-~~~~~~-----~v~~~~~~~~~~~i~~~L~~~gl~d~~di-~~v~Hq~~~~  304 (387)
T 3a5r_A          253 -----H----LL------------ESGL-SFHLYK-----TVPTLISNNIKTCLSDAFTPLNISDWNSL-FWIAHPGGPA  304 (387)
T ss_dssp             -----E----EE------------TTEE-EEEECT-----THHHHHHHHHHHHHHHHHGGGTCCCGGGS-EEEECCSCHH
T ss_pred             -----e----Ec------------CCCe-EEEecc-----hHHHHHHHHHHHHHHHHHHhcCCCChhhe-eEEECCCCHH
Confidence                 0    00            0000 000000     001111245567888999999998 8888 7888876554


Q ss_pred             cccHHHHHHHHhhcC--CCCceec-ccccccchHHHhHHHHHHHHHHHHH-hcCCCCCCCCCCCCCccCCCCCCCCcccc
Q psy5293         254 LGDVIELKAIGSLFP--AQRLMVS-STKGAHGHLLGAAGNLESAFTILAV-HEGLVPPNVNLEDPCEEAGGYECPTAVTE  329 (359)
Q Consensus       254 ~~d~~E~~al~~~~~--~~~~~v~-~~k~~~Gh~~~AsG~~~~~~~~~~l-~~~~ip~~~~~~~~~~~~~~~~~~~~~~~  329 (359)
                      .     .+.+.+.++  ..++..+ .....+||+.+||-.+.+.+++..= +.|.+                      . 
T Consensus       305 i-----~~~~~~~lgl~~ek~~~s~~~l~~~GNtssAsi~~~L~~~~~~g~~~G~~----------------------~-  356 (387)
T 3a5r_A          305 I-----LDQVTAKVGLEKEKLKVTRQVLKDYGNMSSATVFFIMDEMRKKSLENGQA----------------------T-  356 (387)
T ss_dssp             H-----HHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCS----------------------B-
T ss_pred             H-----HHHHHHHcCCChHHhHHHHHHHHhcCCcchhHHHHHHHHHHHhccccCCC----------------------C-
Confidence            3     333444444  2233332 2345579999999777776665432 11100                      0 


Q ss_pred             cccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         330 WKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       330 ~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                       +.++...++..+||.|-+.++++|+-.+
T Consensus       357 -~G~~~d~vll~~fG~G~t~~~~ll~~~~  384 (387)
T 3a5r_A          357 -TGEGLEWGVLFGFGPGITVETVVLRSVP  384 (387)
T ss_dssp             -TTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred             -CCCCcceEEEEEecCcceeeehhheecc
Confidence             0011268899999998888888887643

>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B*

Probab=99.17  E-value=7.9e-10  Score=104.57  Aligned_cols=79  Identities=18%  Similarity=0.199  Sum_probs=65.0

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCC--EEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCC
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHAD--VMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQ   99 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d--~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~   99 (359)
                      ++.+++..+|++. |.+.|+.+| |++.||..|.++|++|.++  .+||+|+|.+..+.          +.         
T Consensus        94 ~a~~v~~~lG~~~~~~~~v~~aC~~~~~al~~A~~~i~sg~~~~~~vLvvg~e~~s~~~----------~~---------  154 (357)
T 3s3l_A           94 AASYVAHEAVGRHVPAFGLAQRCNGGMGAIELAGAYLGSGIGAGHAALLTTGDRFAGPR----------ID---------  154 (357)
T ss_dssp             HHHHHHHHHTCSSSCEEEEECGGGHHHHHHHHHHHHHHTTSSSSSEEEEEEEECCCTTT----------CC---------
T ss_pred             HHHHHHHHhCCCCCcEEEEcCccHHHHHHHHHHHHHHHcCCCCCCEEEEEEEecccccc----------cc---------
Confidence            5889999999975 999999999 9999999999999999999  99999999844211          10         


Q ss_pred             CCCCccCCCCCceecceeeEEeecch
Q psy5293         100 ASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus       100 ~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                         .+++ +..+++|||++|+++++.
T Consensus       155 ---~~~~-~~~~lfGDGA~A~vl~~~  176 (357)
T 3s3l_A          155 ---RWNS-VDVTMYGDGAAALVLSTR  176 (357)
T ss_dssp             ---TTTS-SSSCCBCCEEEEEEEESS
T ss_pred             ---cccc-cCCcccccccEEEEEecC
Confidence               1222 257889999999999864

>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A

Probab=99.08  E-value=4.4e-10  Score=107.68  Aligned_cols=243  Identities=15%  Similarity=0.112  Sum_probs=137.6

Q ss_pred             CCChHHHHHHHHHcCCCcc---ceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQ---TLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp---~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|++  +.+++..+|++..   ++.++.+| +++.||..|.++|++|.++.+||+|+|.++..+          ..    
T Consensus       137 ~p~~--a~~v~~~LGl~~~~~~~~~v~~~C~g~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~----------~~----  200 (393)
T 3ov2_A          137 MPGA--DYRLATLLGLPLTVNRLMIYSQACHMGAAMLRIAKDLAENNRGARVLVVACEITVLSF----------RG----  200 (393)
T ss_dssp             BSCH--HHHHHHHHTCCTTSEEEEEESCCTTHHHHHHHHHHHHHHHSTTCEEEEEEEECGGGTC----------CC----
T ss_pred             CCCH--HHHHHHHcCCCCCcceeeEEcCccHHHHHHHHHHHHHHHcCCCCEEEEEEEeccchhc----------cC----
Confidence            4665  9999999999873   79999999 999999999999999999999999999842110          00    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                        |..  +.++.....+++|||++|++++..+... -...++ .+...+..                  ..|..... + 
T Consensus       201 --~~d--~~~~~~~~~~lFGDGAaA~vl~~~~~~~-~~~~~~-~~~~~~~~------------------~~p~~~~~-~-  254 (393)
T 3ov2_A          201 --PNE--GDFEALAGQAGFGDGAGAVVVGADPLEG-IEKPIY-EIAAAMQE------------------TVAESQGA-V-  254 (393)
T ss_dssp             --CCT--TCHHHHHHHHHBCCEEEEEEEESSCCTT-TCCCSE-EEEEEEEE------------------ECTTCTTS-E-
T ss_pred             --Ccc--cchhhhcccccccCccEEEEEEecCCCc-ccCcee-EEEecCcE------------------EecCCccc-C-
Confidence              110  1111123467899999999998643210 001111 22211100                  00000000 0 


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCC-CCccEEEeccCCCC
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSP-GDISYINAHATSTP  253 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~-~dI~~ie~h~~~t~  253 (359)
                             ....            ...|. .+.+..+.....     .....+++.++|+++|+++ +|| ++..|--+  
T Consensus       255 -------~~~~------------~~~g~-~~~~~~~v~~~~-----~~~~~~~i~~~L~~~gl~~~~di-~~v~Hq~n--  306 (393)
T 3ov2_A          255 -------GGHL------------RAFGW-TFYFLNQLPAII-----ADNLGRSLERALAPLGVREWNDV-FWVAHPGN--  306 (393)
T ss_dssp             -------EEEE------------ETTEE-EEEECTTHHHHH-----HTTSHHHHHHHHGGGTCCSGGGS-EEEECCCC--
T ss_pred             -------ceee------------eCCce-EEEECcHHHHHH-----HHHHHHHHHHHHHHcCCCcccCc-EEEECCCC--
Confidence                   0000            00000 000000000000     0122467899999999997 888 77888444  


Q ss_pred             cccHHHHHHHHhhcC--CCCceec-ccccccchHHHhHHHHHHHHHHHH-HhcCCCCCCCCCCCCCccCCCCCCCCcccc
Q psy5293         254 LGDVIELKAIGSLFP--AQRLMVS-STKGAHGHLLGAAGNLESAFTILA-VHEGLVPPNVNLEDPCEEAGGYECPTAVTE  329 (359)
Q Consensus       254 ~~d~~E~~al~~~~~--~~~~~v~-~~k~~~Gh~~~AsG~~~~~~~~~~-l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~  329 (359)
                         ..-.+++.+.++  ..+++.+ ..-..+||+.+||=.+.+.++... ++.|.+.                       
T Consensus       307 ---~~i~~~v~~~Lgl~~ek~~~s~~~l~~~GNtssAsip~~L~~~~~~~~~~g~~~-----------------------  360 (393)
T 3ov2_A          307 ---WAIIDAIEAKLQLSPDKLSTARHVFTEYGNMQSATVYFVMDELRKRSAVEGRST-----------------------  360 (393)
T ss_dssp             ---HHHHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHHHHHHTTCSB-----------------------
T ss_pred             ---hHHHHHHHHHcCCCHHHHHHHHHHHHHhCChHHhHHHHHHHHHHHhhhhcCCcC-----------------------
Confidence               334455555554  3333332 112335999999876666665543 2222221                       


Q ss_pred             cccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         330 WKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       330 ~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                       +.++...++..+||.|-+-.+++|++.+
T Consensus       361 -~G~~~d~vll~~fG~G~t~~~~ll~~~~  388 (393)
T 3ov2_A          361 -TGDGLQWGVLLGFGPGLSIETVVLRSMP  388 (393)
T ss_dssp             -TTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred             -CCCCCCeEEEEEECccceeeeeeeEEcc
Confidence             1011368899999999999999998754

>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665}

Probab=99.05  E-value=3.5e-09  Score=99.81  Aligned_cols=83  Identities=16%  Similarity=0.237  Sum_probs=67.2

Q ss_pred             ccCCChHHHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          17 PFFPNMVPAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        17 ~~~~~~~~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      ..+|++  +.+|...||++. +++.|+.+| +++.||..|.++|++|.++.+||+++|.+...           +.    
T Consensus        96 ~~~P~~--a~~v~~~LGl~~~~a~di~~~C~g~~~aL~~A~~~i~~g~~~~~Lvv~~E~~s~~-----------~d----  158 (350)
T 4ewp_A           96 HATPSA--AALVAHEIGATPAPAYDVSAACAGYCYGVAQADALVRSGTARHVLVVGVERLSDV-----------VD----  158 (350)
T ss_dssp             CSSSCH--HHHHHHHTTCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEGGGG-----------CC----
T ss_pred             CCCCch--HHHHHHHhCCCCceEEEeecchhhHHHHHHHhhhhhhCCCccceeEeeeeeceec-----------cc----
Confidence            345666  899999999976 899999999 99999999999999999999999999973211           10    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                               +.++...+++|+|+++++++..
T Consensus       159 ---------~~~~~~~~lfgDGA~A~vl~~~  180 (350)
T 4ewp_A          159 ---------PTDRSISFLLGDGAGAVIVAAS  180 (350)
T ss_dssp             ---------TTCTTTGGGBCEEEEEEEEEEE
T ss_pred             ---------ccccccccccccchheeeeecc
Confidence                     1233456789999999999764

>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A

Probab=99.05  E-value=1.5e-09  Score=103.75  Aligned_cols=87  Identities=17%  Similarity=0.169  Sum_probs=66.4

Q ss_pred             CCChHHHHHHHHHcCCCcc---ceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQ---TLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp---~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|++  +.+++..+|+++.   .+.++.+| +++.||..|.++|++|.++.+||+|+|.+...+           .    
T Consensus       131 ~p~~--a~~v~~~LGl~~~~~~~~~~~~~C~~~~~al~~A~~~i~sg~~~~vLvvg~E~~s~~~-----------~----  193 (387)
T 3oit_A          131 VPGV--DFRLVPLLGLRPSVRRTMLHLNGCFAGCAALRLAKDLAENSRGARVLVVAAELTLMYF-----------T----  193 (387)
T ss_dssp             ESCH--HHHHHHHHTCCTTCEEEEEECCGGGHHHHHHHHHHHHHHSSTTCEEEEEEEECGGGTC-----------C----
T ss_pred             cccH--HHHHHHHhCCCCCcceeeEECchhHHHHHHHHHHHHHHhcCCCCEEEEEEEeccchhc-----------c----
Confidence            4555  8999999999873   79999999 999999999999999999999999999843110           0    


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                       +|..  +.++.....+++|||++|++++..
T Consensus       194 -~~~d--~~~~~~~~~~lFGDGAaA~vl~~~  221 (387)
T 3oit_A          194 -GPDE--GCFRTLLVQGLFGDGAAAVIVGAD  221 (387)
T ss_dssp             -CCCS--SSCHHHHHHHHBCCEEEEEEEESS
T ss_pred             -Cccc--cchHhhhcccccccceEEEEEecC
Confidence             0110  111222346789999999999864

>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A*

Probab=99.01  E-value=2.2e-09  Score=104.67  Aligned_cols=77  Identities=8%  Similarity=0.078  Sum_probs=64.0

Q ss_pred             CCChHHHHHHHHHcCC---C-ccceeccccc-HHHHHHHHHHHHHHcCCC--CEEEEeeeCCCCCHHHHHHHHhhccccc
Q psy5293          19 FPNMVPAGAISIDMDS---K-VQTLCVYCLC-YGGHAIGDAFRLIQGGHA--DVMIAGAAESCISQLSIAAFCRVRALAT   91 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~---~-gp~~~v~~ac-sgl~Al~~A~~~I~~G~~--d~~lvgg~e~~~~~~~~~~~~~~~~l~~   91 (359)
                      .+++  +.+++..+|+   + .+++.|+++| +|+.||..|.++|++|.+  +.+||+|+|.+.                
T Consensus        88 ~p~~--a~~v~~~lgl~g~~~~~~~~v~~aC~gg~~AL~~A~~~I~sg~~~~~~vLVvg~e~~~----------------  149 (450)
T 2f82_A           88 SKSI--KTFLMQLFEKCGNTDVEGVDSTNACYGGTAALLNCVNWVESNSWDGRYGLVICTDSAV----------------  149 (450)
T ss_dssp             SSCH--HHHHTHHHHTTTCCCCBCCEECSGGGHHHHHHHHHHHHHHSTTCCSCEEEEEEEEEEC----------------
T ss_pred             CCcH--HHHHHHHhCCcCCCCceEEEhhhhhHHHHHHHHHHHHHHHcCCCcCCeEEEEEeeecc----------------
Confidence            4554  8999999998   3 5899999999 999999999999999998  999999999731                


Q ss_pred             cCCCCCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          92 QFNNEPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        92 ~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                                  +++.....++|||++|+++++.
T Consensus       150 ------------~~~~~~~~~fGDGA~A~ll~~~  171 (450)
T 2f82_A          150 ------------YAEGPARPTGGAAAIAMLIGPD  171 (450)
T ss_dssp             ------------CSSSTTGGGCEEEEEEEEEESS
T ss_pred             ------------ccCCCCCcccccceEEEEeccC
Confidence                        1112356789999999999754

>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A*

Probab=98.92  E-value=7.7e-09  Score=98.74  Aligned_cols=77  Identities=9%  Similarity=-0.010  Sum_probs=64.0

Q ss_pred             CCChHHHHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCC
Q psy5293          19 FPNMVPAGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNN   95 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~   95 (359)
                      +|++  +.+|+..||++.  +++.++++| +++.||..|.++|++|.++.+||+|+|.+...                  
T Consensus        90 ~ps~--a~~v~~~LGl~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~vLVvg~e~~s~~------------------  149 (388)
T 3v4n_A           90 SKAA--AVVLHRLMGIQPFARSFEIKEAXYGATAGLQLAKNHVALHPDKKVLVVAADIAKYG------------------  149 (388)
T ss_dssp             SSCH--HHHHHHHTTCCSSCEEEEEESGGGHHHHHHHHHHHHHHHCTTCEEEEEEEEEECCC------------------
T ss_pred             CccH--HHHHHHHcCCCCCceEeehhhhhhHHHHHHHHHHHHHhcCCCCEEEEEEehhhccc------------------
Confidence            5665  999999999975  899999999 99999999999999999999999999973211                  


Q ss_pred             CCCCCCCCccCCCCCceecceeeEEeecc
Q psy5293          96 EPAQASRPFDKRRDGFVMGEGSAILVLEE  124 (359)
Q Consensus        96 ~~~~~~~~fd~~~~G~~~geGa~a~~l~~  124 (359)
                              ++ ..+.+++|+|++|+++++
T Consensus       150 --------~~-~~~~~lfGDGA~A~ll~~  169 (388)
T 3v4n_A          150 --------LN-SGGEPTQGAGAVAMLVSS  169 (388)
T ss_dssp             --------TT-CTTGGGCEEEEEEEEEEE
T ss_pred             --------CC-CCCCCccccceeEEEeec
Confidence                    01 012477999999999976

>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A

Probab=98.84  E-value=4e-08  Score=91.05  Aligned_cols=51  Identities=22%  Similarity=0.400  Sum_probs=45.2

Q ss_pred             HHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCC
Q psy5293          24 PAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCIS   76 (359)
Q Consensus        24 ~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~   76 (359)
                      .+..++..++  .|.+.|+++| |++.||..|..+|++|.+|.+||+|+|.+.+
T Consensus        91 ~A~~va~~Lg--ipafdV~~ACsg~~~AL~~Aa~~I~sG~~~~VLVVGaE~~S~  142 (347)
T 3lma_A           91 TANYVARHLK--IPFLCLFGACSTSMESIAISSALIDGGFAKRALAATSSHNAT  142 (347)
T ss_dssp             THHHHHHHHC--CCEEEBCCSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGG
T ss_pred             HHHHHHHHhC--CCEEEecChhHHHHHHHHHHHHHHhcCCCCEEEEEEeccccc
Confidence            4677777773  4899999999 9999999999999999999999999998543

>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa}

Probab=98.83  E-value=5.2e-08  Score=94.91  Aligned_cols=91  Identities=13%  Similarity=0.115  Sum_probs=67.9

Q ss_pred             cCCChHHHHHHHHHcCCCc-c-ceec-cccc-HHHHHHHHHHHHHHc----CCCCEEEEeeeCCCCCHHHHHHHHhhccc
Q psy5293          18 FFPNMVPAGAISIDMDSKV-Q-TLCV-YCLC-YGGHAIGDAFRLIQG----GHADVMIAGAAESCISQLSIAAFCRVRAL   89 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~g-p-~~~v-~~ac-sgl~Al~~A~~~I~~----G~~d~~lvgg~e~~~~~~~~~~~~~~~~l   89 (359)
                      .+|++  +.+|+..||++. + .+.| +.+| +++.||..|.++|++    |.++.+||+|+|.++....+ ......  
T Consensus       144 ~~P~~--a~~v~~~LGl~~~~~~~dv~~~~Csgg~~AL~~A~~~i~a~~~~G~~~~vLVvg~E~~S~~~~~-~~~~~~--  218 (465)
T 3e1h_A          144 ANPGY--DHYVAKELGLSDRLEKVLLHGIGCSGGLAALRTAANLCLGHTARGKPARILVLALEVSTTMVRS-ELESID--  218 (465)
T ss_dssp             CSSCH--HHHHHHHHTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHHHHTTCCCEEEEEEEECCGGGHHH-HHHHHH--
T ss_pred             CCCcH--HHHHHHHhCCCCCeeEEEecCCcchHHHHHHHHHHHHHhcccccCCCCEEEEEEEeecchhcCc-cccccc--
Confidence            45665  999999999986 4 6888 7999 999999999999997    99999999999985433321 110000  


Q ss_pred             cccCCCCCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          90 ATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        90 ~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                       +           ..++....+++|||++|++++..
T Consensus       219 -~-----------~~~d~~t~~LFGDGAaAvVl~~~  242 (465)
T 3e1h_A          219 -A-----------LQETRIGIALFSDCASAVILSNG  242 (465)
T ss_dssp             -H-----------HTCCCCHHHHBCCEEEEEEEECC
T ss_pred             -c-----------cccccccccccccceeEEEEEcc
Confidence             0           01223456789999999999864

>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor}

Probab=98.76  E-value=9.1e-08  Score=91.91  Aligned_cols=82  Identities=12%  Similarity=0.143  Sum_probs=65.0

Q ss_pred             cCCChHHHHHHHHHcCCCc--cceec-cccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccC
Q psy5293          18 FFPNMVPAGAISIDMDSKV--QTLCV-YCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQF   93 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~g--p~~~v-~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~   93 (359)
                      .+|+.  +.+++..+|++.  +.+.| +.+| +++.||..|.++|++|.++.+||+|+|.++...               
T Consensus       171 ~~P~~--a~~v~~~LGl~~~~~~~~v~~~~Cagg~~AL~~A~~~i~ag~~~~vLvvg~E~~S~~~---------------  233 (413)
T 3v7i_A          171 ALPGL--DVALANRLPLRGDTMLLPATQWACVAGTRSLALAADLVAADPDRVVLVVISEALSTTY---------------  233 (413)
T ss_dssp             CSSCH--HHHHHHHTTCCTTCEEEEESSCGGGHHHHHHHHHHHHHHHCTTCEEEEEEEECGGGGC---------------
T ss_pred             CcCHH--HHHHHHHhCCCCCceEEEeeCCccHHHHHHHHHHHHHHhcCCCCEEEEEEEecccccc---------------
Confidence            35665  899999999986  56777 9999 999999999999999999999999999843211               


Q ss_pred             CCCCCCCCCCccCCCC-----CceecceeeEEeecch
Q psy5293          94 NNEPAQASRPFDKRRD-----GFVMGEGSAILVLEEL  125 (359)
Q Consensus        94 ~~~~~~~~~~fd~~~~-----G~~~geGa~a~~l~~~  125 (359)
                              . ++++..     ..++|||++|++++..
T Consensus       234 --------~-~~d~~~~~lv~~~LFGDGAaAvvl~~~  261 (413)
T 3v7i_A          234 --------Q-PADDTLESLIVRLLFADTAVAAVVTGR  261 (413)
T ss_dssp             --------C-SSCCSTTHHHHHHHBCCEEEEEEEESS
T ss_pred             --------C-ccccchhhhhcceeeccccEEEEEEec
Confidence                    0 112222     5679999999999864

>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens}

Probab=98.48  E-value=9.4e-07  Score=86.51  Aligned_cols=76  Identities=13%  Similarity=0.144  Sum_probs=59.7

Q ss_pred             CCChHHHHHHHHHcC---CCc-cceeccccc-HHHHHHHHHHHHHHcCC--CCEEEEeeeCCCCCHHHHHHHHhhccccc
Q psy5293          19 FPNMVPAGAISIDMD---SKV-QTLCVYCLC-YGGHAIGDAFRLIQGGH--ADVMIAGAAESCISQLSIAAFCRVRALAT   91 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g---~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~--~d~~lvgg~e~~~~~~~~~~~~~~~~l~~   91 (359)
                      .+++  +..|...|+   ++. +++.|.++| +|+.||..|.++|++|.  ++.+||+|+|.                ..
T Consensus       109 ~ps~--a~~v~~~L~~lG~~~~~~~dv~~aC~gg~~AL~~A~~~i~sg~~~~~~aLVV~~Ei----------------a~  170 (478)
T 2p8u_A          109 SKSV--KTNLMQLFEESGNTDIEGIDTTNACYGGTAAVFNAVNWIESSSWDGRYALVVAGDI----------------AV  170 (478)
T ss_dssp             SSCH--HHHHGGGTTTTTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE----------------EC
T ss_pred             CccH--HHHHHHHHhhcCCCCceEEEEcchhHHHHHHHHHHHHHHHcCCccCCEEEEEEeee----------------ec
Confidence            4554  788885444   444 889999999 99999999999999999  99999999994                11


Q ss_pred             cCCCCCCCCCCCccCCCCCceecceeeEEeecc
Q psy5293          92 QFNNEPAQASRPFDKRRDGFVMGEGSAILVLEE  124 (359)
Q Consensus        92 ~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~  124 (359)
                                  |.+.....+.|+|++|+++.+
T Consensus       171 ------------~~~~~~~~~fGdGA~A~Ll~~  191 (478)
T 2p8u_A          171 ------------YATGNARPTGGVGAVALLIGP  191 (478)
T ss_dssp             ------------CCSSTTGGGCEEEEEEEEEES
T ss_pred             ------------ccCCCCCCcccceeEEEEEec
Confidence                        122224578999999999975

>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens}

Probab=97.53  E-value=2.4e-05  Score=76.28  Aligned_cols=79  Identities=9%  Similarity=0.065  Sum_probs=57.3

Q ss_pred             cccCCChHHHHHHHHHcCCCc----cceeccccc-HHHHHHHHHHHHHHcCCCC--EEEEeeeCCCCCHHHHHHHHhhcc
Q psy5293          16 NPFFPNMVPAGAISIDMDSKV----QTLCVYCLC-YGGHAIGDAFRLIQGGHAD--VMIAGAAESCISQLSIAAFCRVRA   88 (359)
Q Consensus        16 ~~~~~~~~~a~~ia~~~g~~g----p~~~v~~ac-sgl~Al~~A~~~I~~G~~d--~~lvgg~e~~~~~~~~~~~~~~~~   88 (359)
                      ...+|++  +..|...||+.|    +++.+.++| +++.||..|.++|++|..+  .+|++..+.               
T Consensus        87 ~~~~ps~--a~~v~~~l~~~g~~~~~a~D~~~aC~g~~~al~~A~~~i~~g~~~~~lvvv~~s~~---------------  149 (460)
T 2wya_A           87 IDKSKAV--KTVLMELFQDSGNTDIEGIDTTNACYGGTASLFNAANWMESSSWDGRYAMVVCGDI---------------  149 (460)
T ss_dssp             SCSSSCH--HHHHGGGTGGGTCCCCBCCEEESGGGHHHHHHHHHHHHHTSTTCCSCEEEEEEEEE---------------
T ss_pred             CCCCCch--HHHHHHHHhccCCCCeeEechhhhhhhHHHHHHHHHHHHHhccccceEEEEEeccc---------------
Confidence            4456676  888888887654    568899999 9999999999999999876  444444442               


Q ss_pred             ccccCCCCCCCCCCCccCCCCCceecceeeEEeecc
Q psy5293          89 LATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEE  124 (359)
Q Consensus        89 l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~  124 (359)
                       +.            +.+.......|+|++++++..
T Consensus       150 -~~------------~~d~~~~~~~GdGA~A~l~~~  172 (460)
T 2wya_A          150 -AV------------YPSGNARPTGGAGAVAMLIGP  172 (460)
T ss_dssp             -EC------------CCSSTTGGGCEEEEEEEEEES
T ss_pred             -cc------------cccccccccCcchHHhhhccc
Confidence             11            223334566799999988765

>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum}

Probab=94.60  E-value=0.013  Score=55.83  Aligned_cols=71  Identities=23%  Similarity=0.349  Sum_probs=57.4

Q ss_pred             EEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.+.+....+...+..... ++....+.|+.++.++.++.+..++.++|++||.+++.++|+|+..+|..
T Consensus       106 gv~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~  177 (412)
T 4ewg_A          106 GVAYGSSSGSVEPIRAFGTMLESGSMTDVTSNSYVQMMPHTTAVNVSLFWDLKGRIVPTSSACASGSQAIGY  177 (412)
T ss_dssp             EEEEECSCCCHHHHHHHHHHHHHCCCTTCCTTHHHHHSTTHHHHHHHHHTTCCSCEEECCCGGGHHHHHHHH
T ss_pred             EEEEeccCCchHHHHHHHHHHHhcCcccCChhhhhhhcccHHHHHHHHHhCCCCCcccccchhHHHHHHHHH
Confidence            777887755544444433333 56677899999999999999999999999999999999999999877766

>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis}

Probab=94.25  E-value=0.023  Score=54.68  Aligned_cols=75  Identities=24%  Similarity=0.355  Sum_probs=57.2

Q ss_pred             CCcEEEEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         132 SANIYAEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       132 g~~i~~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +.++ +++.|..........+... +..+....+.|+.++.+++++.+..++.++|++||.+++.++|+++..+|..
T Consensus       121 ~~~i-gv~vgt~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~  196 (434)
T 2gp6_A          121 TNRL-MVSIGTGLGSAEELVFSYDDMRARGMKAVSPLTVQKYMPNGAAAAVGLERHAKAGVMTPVSACASGAEAIAR  196 (434)
T ss_dssp             TTSE-EEEEECSSCSCHHHHHHHHHHTTSCSSSSCTTHHHHHSTTHHHHHHHHHSCCCSCEECEECGGGHHHHHHHH
T ss_pred             CCce-EEEEccccccHHHHHHHHHHHHhcCccccChhhhhccchhhHHHHHhhhhcCCCCeEEeCCCCcHHHHHHHH
Confidence            3444 6778776554443333222 2345667889999999999999999999999999999999999999877665

>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes}

Probab=93.77  E-value=0.022  Score=54.36  Aligned_cols=71  Identities=34%  Similarity=0.582  Sum_probs=56.7

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|.+......+.+.+. ..++.+..+.|+..+..+.++.+..++.++|++||.+++.++|+++..++..
T Consensus       102 gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCss~~~Al~~  173 (413)
T 3o04_A          102 GVWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTTVTACATATNSIGD  173 (413)
T ss_dssp             EEEEECSSCCHHHHHHHHHHHHHHCTTTSCTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHH
T ss_pred             EEEEccccCcHHHHHHHHHHHHhcCCCccCchhhhcccccHHHHHHHHHhCCCCcceeecchhHHHHHHHHH
Confidence            7788877655544443333 3355677889999999999999999999999999999999999999776655

>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A*

Probab=93.71  E-value=0.022  Score=54.69  Aligned_cols=71  Identities=23%  Similarity=0.417  Sum_probs=55.6

Q ss_pred             EEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|.+........+..... ++.+..+.|+..+..+.++.+..++.++|++||.+++.++|+|+..+|..
T Consensus       120 Gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~tv~~aCsSgl~Ai~~  191 (428)
T 3mqd_A          120 GIIMGSGGPSTRTIVDSADITREKGPKRVGPFAVPKAMSSTASATLATFFKIKGINYSISSACATSNHCIGN  191 (428)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHHHCGGGGCTTCHHHHSTTHHHHHHHHHTTCCSCEECCCCGGGHHHHHHHH
T ss_pred             EEEEccCCCchHHHHHHHHHHHhcCccccCchhhccccccHHHHHHHHHcCCCCceeeecCccHHHHHHHHH
Confidence            777877644333233333222 45677889999999999999999999999999999999999999877766

>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A*

Probab=93.45  E-value=0.027  Score=53.78  Aligned_cols=71  Identities=28%  Similarity=0.431  Sum_probs=55.3

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.+..........+.+. +.++.+..+.|+.++..+.++.+..++.++|++||.+++.++|+|+..+|..
T Consensus       109 gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~  180 (416)
T 2wge_A          109 AVVVGTGLGGAERIVESYDLMNAGGPRKVSPLAVQMIMPNGAAAVIGLQLGARAGVMTPVSACSSGSEAIAH  180 (416)
T ss_dssp             EEEEECCSCCCTHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHH
T ss_pred             EEEEeecCCcHHHHHHHHHHHHhcCcccCCchhhccccchhHHHHHHHHhccCCCcccccCchHHHHHHHHH
Confidence            6778876554443333222 2245667789999999999999999999999999999999999999877665

>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A

Probab=93.02  E-value=0.032  Score=53.42  Aligned_cols=71  Identities=34%  Similarity=0.623  Sum_probs=55.9

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|.+........+... ...+.+..+.|+..+.++.++.+..++.++|++||++++.++|+|+..+|..
T Consensus       116 gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~  187 (427)
T 3ho9_A          116 GAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAATSGVHNIGH  187 (427)
T ss_dssp             EEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHH
T ss_pred             EEEEccccccHHHHHHHHHHHHhcCccccCcceeccccchHHHHHHHHHhCCCCCeecccchhHHHHHHHHH
Confidence            6777776554444443222 2355667789999999999999999999999999999999999999777665

>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A

Probab=92.94  E-value=0.04  Score=52.84  Aligned_cols=71  Identities=44%  Similarity=0.805  Sum_probs=54.4

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|.+......+.+.+. ..++....+.|+.++.++.++.+..++.++|++||.+++.++|+|+..++..
T Consensus       117 gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~  188 (431)
T 2ix4_A          117 GVSIGGGIGSICDIVEAAQLICEKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGD  188 (431)
T ss_dssp             EEEEEESSCCHHHHHHHHHHHHTTCGGGCCTTHHHHHCTTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHH
T ss_pred             EEEEeeccccHHHHHHHHHHHHhcCcccCChhhhhcchhHHHHHHHHHHHCCCCceeCccChhHHHHHHHHH
Confidence            6777766444333333222 2245567789999999999999999999999999999999999999877665

>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A

Probab=92.85  E-value=0.035  Score=53.20  Aligned_cols=71  Identities=23%  Similarity=0.461  Sum_probs=54.8

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.+.+........+... ..++.+..+.|+.++..++++.+..++.++|++||.+++.++|+|+..+|..
T Consensus       121 gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~~v~~aCsS~l~Al~~  192 (430)
T 1ox0_A          121 GVIVASGIGGIKEIEDQVLRLHEKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGD  192 (430)
T ss_dssp             EEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHH
T ss_pred             EEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhccchhHHHHHHHHHhcCCCceEeecCchHHHHHHHHH
Confidence            6777766444333332222 2245667789999999999999999999999999999999999999877766

>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A

Probab=92.79  E-value=0.047  Score=52.33  Aligned_cols=71  Identities=38%  Similarity=0.715  Sum_probs=55.4

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.+.+........+... ..++.+..+.|+..+..+.++.+..++.++|++||.+++.++|+|+..+|..
T Consensus       116 gv~vg~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~  187 (428)
T 3kzu_A          116 GVLIGSGIGGIEGIVEAGYTLRDKGPRRISPFFIPGRLINLASGHVSIKHKLRGPNHSVVTACATGTHAIGD  187 (428)
T ss_dssp             EEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTTTTTTCTTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHH
T ss_pred             EEEEcccCCcchhHHHHHHHHHhcCccccCchhcccchhhhHHHHHHHHcCCCCceeeecCccHHHHHHHHH
Confidence            6777776554444333222 3355677889999999999999999999999999999999999999777665

>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A

Probab=92.78  E-value=0.039  Score=53.05  Aligned_cols=71  Identities=54%  Similarity=0.818  Sum_probs=54.3

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|........+.+... +.++....+.|+.++..++++.+..++.++|++||.+++.++|+|+..+|..
T Consensus       126 gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~taCsS~l~Al~~  197 (438)
T 2iwz_A          126 GVAIGMGMIPLEVVSETALNFQTKGYNKVSPFFVPKILVNMAAGQVSIRYKLKGPNHAVSTACTTGAHAVGD  197 (438)
T ss_dssp             EEEEEESCCCHHHHHHHHHHHHHHCGGGSCTTHHHHTCTTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHH
T ss_pred             EEEEecccCcHHHHHHHHHHHHhcCCcccChhhhhhhhhhHHHHHHHHHhCCCCceeeecCchhHHHHHHHH
Confidence            5777766444333332222 2245567789999999999999999999999999999999999999877765

>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ...

Probab=92.76  E-value=0.02  Score=54.55  Aligned_cols=71  Identities=27%  Similarity=0.377  Sum_probs=54.5

Q ss_pred             EEEeecccccchhhhhhhhhh--cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL--QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|......+...+.+...  ++.+..++|+.++..+.++.+..++.++|++||.+++.++|+|+..+|..
T Consensus       100 gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~lgl~Gp~~~v~taCsS~l~Al~~  172 (406)
T 2vba_A          100 GLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGN  172 (406)
T ss_dssp             EEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEEEEECGGGHHHHHHHH
T ss_pred             EEEEEECCcchHHHHHHHHHHHhccCccccChhhhhhhhhHHHHHHHHHhccCCCceeeeccchhHHHHHHHH
Confidence            678887655443333322222  34455688999999999999999999999999999999999999887776

>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1

Probab=92.64  E-value=0.039  Score=52.62  Aligned_cols=71  Identities=34%  Similarity=0.635  Sum_probs=54.4

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|..........+.+. ..++.+..+.|+.++.++.++.+..++.++|++||.+++.++|+|+..+|..
T Consensus       105 gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~  176 (416)
T 1e5m_A          105 GVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGD  176 (416)
T ss_dssp             EEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHH
T ss_pred             EEEEeecCCcHHHHHHHHHHHHhcCcccCChhHhhhhhhHHHHHHHHHHhCCCCceeCccchhHHHHHHHHH
Confidence            6777766444333332222 2245566789999999999999999999999999999999999999877765

>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1

Probab=92.63  E-value=0.047  Score=51.89  Aligned_cols=71  Identities=34%  Similarity=0.660  Sum_probs=54.0

Q ss_pred             EEEeecccccchhhhhhh-hhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSN-NALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~-~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.+.+......+.+.. .+.++.+..+.|+.++..++++.+..++.++|++||.+++.++|+|+..+|..
T Consensus        99 gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~  170 (408)
T 1j3n_A           99 GTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGS  170 (408)
T ss_dssp             EEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCCBCCGGGHHHHHHHH
T ss_pred             EEEEEecCCcHHHHHHHHHHHHhcCcccCChhhhhhhhhhHHHHHHHHHhCCCCceeCccCchHHHHHHHHH
Confidence            566776544333333222 22345667789999999999999999999999999999999999999877765

>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A*

Probab=92.31  E-value=0.051  Score=52.42  Aligned_cols=71  Identities=35%  Similarity=0.601  Sum_probs=55.8

Q ss_pred             EEEeecccccchhhhhhhhh-hcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNA-LQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~-~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.+.+........+.... .++....+.|+..+.++.++.+..++.++|++||.+++.++|+|+..+|..
T Consensus       131 gv~vgt~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~Gp~~~v~~aCsS~l~Al~~  202 (451)
T 4ddo_A          131 ATVVASGIGGFPGLAEAVRIGETRGVRRLSPFTIPFFLSNLAAGQISIKHRFRGPLGCPVTACAASVQAIGD  202 (451)
T ss_dssp             EEEEECSSCSHHHHHHHHHHHHHTCGGGCCTTHHHHHCTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHH
T ss_pred             EEEEeecCCchHHHHHHHHHHHhcCccccCcchhhccccchHHHHHHHHhcCCCceeeecCccHHHHHHHHH
Confidence            67777765554444433332 245667789999999999999999999999999999999999999777655

>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=92.29  E-value=0.057  Score=51.47  Aligned_cols=71  Identities=21%  Similarity=0.256  Sum_probs=55.1

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.+.+........+.+. ..++....++|+..+.++.+..+..++.++|++||.+++.++|+|+..+|..
T Consensus       107 gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~  178 (415)
T 1tqy_B          107 GVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGH  178 (415)
T ss_dssp             EEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEEEECGGGHHHHHHHH
T ss_pred             EEEEeeCCccHHHHHHHHHHHHhcCcccCChhhhhcccchHHHHHHHHHhCCCCceEeecCCccHHHHHHHH
Confidence            7777776554443333222 2245567889999999999999999999999999999999999999877655

>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus}

Probab=91.88  E-value=0.055  Score=51.98  Aligned_cols=71  Identities=35%  Similarity=0.663  Sum_probs=54.5

Q ss_pred             EEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|........+.+.+. +.++....+.|+.++..++++.+..++.++|++||.+++.++|+|+..+|..
T Consensus       126 gv~vg~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~lgl~gp~~~v~~aCsS~l~Al~~  197 (437)
T 2gqd_A          126 GVWIGSGIGGMETFEIAHKQLMDKGPRRVSPFFVPMLIPDMATGQVSIDLGAKGPNGATVTACATGTNSIGE  197 (437)
T ss_dssp             EEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSSEECBCCGGGHHHHHHHH
T ss_pred             EEEEeecCCcHHHHHHHHHHHHhcCcccCChHHhhhcchhHHHHHHHHHhCCCCceEEecCCccHHHHHHHH
Confidence            7778776444333332222 2244566788999999999999999999999999999999999999877765

>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1

Probab=87.79  E-value=0.14  Score=48.77  Aligned_cols=71  Identities=15%  Similarity=0.324  Sum_probs=49.7

Q ss_pred             EEEeecccccchhhhhhhhhh---cccccccCcchhhcccCCcchh----hhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL---QGSYNKLSPYFVTRILPNMSAG----QISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~---~~~~~~~~p~~~~~~~~~~~a~----~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|..........+.....   .+....+.|+..+..+++..+.    .++.++|++||.+++.++|+|+..+|..
T Consensus       101 gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ia~~lgl~gp~~~v~~aCsS~l~Al~~  178 (424)
T 1tqy_A          101 GVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGN  178 (424)
T ss_dssp             EEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTCCSCEEEECCGGGHHHHHHHH
T ss_pred             EEEEEeCCccHHHHHHHHHHHhhhccCccccChhhhcccccccccchhHhHHHHhcCCCCceEeecCcccHHHHHHHH
Confidence            677776544332222221111   3345567777777777777777    9999999999999999999999877765

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=85.97  E-value=0.34  Score=56.35  Aligned_cols=70  Identities=23%  Similarity=0.344  Sum_probs=53.2

Q ss_pred             CCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCccccccc
Q psy5293         132 SANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS  208 (359)
Q Consensus       132 g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~  208 (359)
                      +.++ +++.|.....      ......+.+..+.++..+....++.+.+++..||++||.+++.+||+|+..+|...
T Consensus       102 ~~~~-gv~~G~~~~~------~~~~~~~~~~~~~~~~~~g~~~~~~a~ris~~~~l~Gps~tv~tACsSsl~Al~~A  171 (2512)
T 2vz8_A          102 GTST-GVWVGVSSSD------ASEALSRDPETLVGYSMIGCQRAMMANRLSFFFDFKGPSITIDTACSSSLLALQSA  171 (2512)
T ss_dssp             TCSC-EEEEEECCCH------HHHHTTSCTTTSCGGGGGGTSTTHHHHHHHHHHTCCSCEEEEECTTSTHHHHHHHH
T ss_pred             CCCe-EEEEEeccHH------HHHHHhcCccccCcceecccchhHHHHHHHHHhCCCCCceeeccHhHHHHHHHHHH
Confidence            4444 7788876321      11112234556788889999999999999999999999999999999998887763

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	359
d2ix4a2	161	c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II	1e-34
d2gfva2	161	c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II	4e-32
d1e5ma2	161	c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II	1e-31
d1j3na2	159	c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II	7e-31
d2vbaa2	151	c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I	8e-30
d1ox0a2	158	c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II	2e-26
d1j3na1	249	c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {	2e-26
d1j3na1	249	c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {	4e-06
d2ix4a1	270	c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II	3e-26
d2gfva1	250	c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {	3e-25
d2gfva1	250	c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {	2e-05
d1ox0a1	256	c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II	2e-23
d1ox0a1	256	c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II	4e-08
d2vbaa1	253	c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E	1e-22
d1e5ma1	250	c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {	1e-20
d1tqya2	205	c.95.1.1 (A:219-423) Actinorhodin polyketide putat	3e-18
d1tqya2	205	c.95.1.1 (A:219-423) Actinorhodin polyketide putat	3e-15
d1tqyb2	194	c.95.1.1 (B:210-403) Actinorhodin polyketide putat	5e-14
d1tqyb2	194	c.95.1.1 (B:210-403) Actinorhodin polyketide putat	1e-13
d1tqya1	216	c.95.1.1 (A:3-218) Actinorhodin polyketide putativ	1e-10
d1tqyb1	208	c.95.1.1 (B:2-209) Actinorhodin polyketide putativ	5e-08

>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

 Score =  122 bits (308), Expect = 1e-34
 Identities = 81/154 (52%), Positives = 103/154 (66%), Gaps = 6/154 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GMSGD HH+T P EDG+GA+LAMTRAL  + L P  I Y+NAHATSTP+GD +E +AI +
Sbjct: 8   GMSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKT 67

Query: 266 LF----PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGY 321
           +F     +  L  SSTKGA GHLLGAAG +E+ F+ILA+H G+ P  +N+++P       
Sbjct: 68  VFSEHATSGTLAFSSTKGATGHLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKR 127

Query: 322 ECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA 355
             P  +T  K    R A+ NSFGFGGTNA L  A
Sbjct: 128 FMP--LTTSKKMLVRTAMSNSFGFGGTNASLLFA 159

>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

 Score =  116 bits (291), Expect = 4e-32
 Identities = 73/153 (47%), Positives = 94/153 (61%), Gaps = 4/153 (2%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           GMS D +H+TSP E+G GA LAM  AL DA +    I Y+NAH TSTP GD  E +A+ +
Sbjct: 10  GMSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKT 69

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +F   A R++VSSTK   GHLLGAAG +ES ++ILA+ +  VPP +NL++P E       
Sbjct: 70  IFGEAASRVLVSSTKSMTGHLLGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFV 129

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE 356
           P    +    G    L NSFGFGGTN  L   +
Sbjct: 130 PHEARQV--SGMEYTLCNSFGFGGTNGSLIFKK 160

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

 Score =  114 bits (287), Expect = 1e-31
 Identities = 69/155 (44%), Positives = 88/155 (56%), Gaps = 5/155 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
            M+ D +H+T+P  DGRGA  A+  AL D+ L P  +SYINAH TSTP  DV E +AI  
Sbjct: 10  AMTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQ 69

Query: 266 LF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
                A  + VSSTK   GHLLG +G +E+  T++A+ E  VPP +NLE+P  E      
Sbjct: 70  ALGNHAYNIAVSSTKSMTGHLLGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYV 129

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
           P            VAL NSFGFGG N  L   +Y+
Sbjct: 130 PGQSRALIV---DVALSNSFGFGGHNVTLAFKKYQ 161

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score =  112 bits (282), Expect = 7e-31
 Identities = 70/151 (46%), Positives = 89/151 (58%), Gaps = 6/151 (3%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G S D HH+T P  +G+GA LAM RAL DA ++P  + YINAH TSTP+GD  E+ AI  
Sbjct: 10  GRSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKR 69

Query: 266 LFPA--QRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYEC 323
           +F    +RLMVSSTK   GHLLGAAG +E+  T+ A++ G++PP        E+      
Sbjct: 70  VFGDHAKRLMVSSTKSMIGHLLGAAGAVEAIATVQALYHGVIPPT----INLEDPDPELD 125

Query: 324 PTAVTEWKTDGRRVALKNSFGFGGTNACLCI 354
              V E +      AL NSF FGG NA L  
Sbjct: 126 LDFVPEPREAKVDYALSNSFAFGGHNAVLAF 156

>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

 Score =  109 bits (274), Expect = 8e-30
 Identities = 57/151 (37%), Positives = 85/151 (56%), Gaps = 8/151 (5%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G + DG  + +P   G GA+  M  A+         I Y+N+H TSTP+GDV EL AI  
Sbjct: 8   GATSDGADMVAP--SGEGAVRCMKMAMHG---VDTPIDYLNSHGTSTPVGDVKELAAIRE 62

Query: 266 LFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
           +F  +   +S+TK   GH LGAAG  E+ +++L +  G + P++N+E+  E+A G    T
Sbjct: 63  VFGDKSPAISATKAMTGHSLGAAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVT 122

Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAE 356
             T+ +       + NSFGFGGTNA L + +
Sbjct: 123 ETTDRE---LTTVMSNSFGFGGTNATLVMRK 150

>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

 Score =  100 bits (250), Expect = 2e-26
 Identities = 56/153 (36%), Positives = 83/153 (54%), Gaps = 4/153 (2%)

Query: 206 GMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS 265
           G + D +H+TSP  +G+GA+ A+  AL +A +SP  ++Y+NAH TSTP  +  E  AI +
Sbjct: 10  GNTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVA 69

Query: 266 LFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPT 325
           +   + + VSSTK   GHLLGAAG +E+  TI A+    VP      +  +         
Sbjct: 70  VL-GKEVPVSSTKSFTGHLLGAAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYG 128

Query: 326 AVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK 358
              E +      A+ N+FGFGG NA L    ++
Sbjct: 129 QGLEKE---IPYAISNTFGFGGHNAVLAFKRWE 158

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score =  103 bits (257), Expect = 2e-26
 Identities = 54/134 (40%), Positives = 77/134 (57%), Gaps = 3/134 (2%)

Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQ 59
           +        +SP+F+     NM     I++       +  V   C  G  A+G A R+IQ
Sbjct: 118 VFLERGPNRISPFFIPMMIANMAS-AHIAMRYGFTGPSSTVVTACATGADALGSALRMIQ 176

Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G AD+++AG  E+ I+ ++I AF  +RAL+T+ N EP +ASRPF   RDGFVMGEG+ +
Sbjct: 177 LGEADLVLAGGTEAAITPMAIGAFAVMRALSTR-NEEPEKASRPFTLSRDGFVMGEGAGV 235

Query: 120 LVLEELDHALARSA 133
           LVLE  +HA  R A
Sbjct: 236 LVLEAYEHAKKRGA 249

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score = 45.5 bits (107), Expect = 4e-06
 Identities = 21/47 (44%), Positives = 35/47 (74%)

Query: 162 NKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMS 208
           N++SP+F+  ++ NM++  I++ +GF GP+  V TACATGA A+G +
Sbjct: 125 NRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGSA 171

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

 Score =  103 bits (257), Expect = 3e-26
 Identities = 60/125 (48%), Positives = 77/125 (61%), Gaps = 1/125 (0%)

Query: 12  PYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIAGA 70
             F  P     + +G +S+    +         C  G H+IGDA R+IQ G ADVM+AG 
Sbjct: 146 SPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGG 205

Query: 71  AESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALA 130
            ES I  LS+A F R RAL+T+FN+ P +ASRPFD  RDGFV+GEGS ++VLEE +HA  
Sbjct: 206 TESSIDALSVAGFSRSRALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKR 265

Query: 131 RSANI 135
           R A I
Sbjct: 266 RGAKI 270

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

 Score =  100 bits (250), Expect = 3e-25
 Identities = 58/134 (43%), Positives = 79/134 (58%), Gaps = 3/134 (2%)

Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQ 59
            L  G    +SP+FV     NMV AG ++I    +  ++ +      G H IG A R+I 
Sbjct: 119 SLMNGGPRKISPFFVPSTIVNMV-AGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIA 177

Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G ADVM+AG AE   + L +  F   RAL+T+ N+ P  ASRP+DK RDGFV+G+G+ +
Sbjct: 178 YGDADVMVAGGAEKASTPLGVGGFGAARALSTR-NDNPQAASRPWDKERDGFVLGDGAGM 236

Query: 120 LVLEELDHALARSA 133
           LVLEE +HA  R A
Sbjct: 237 LVLEEYEHAKKRGA 250

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

 Score = 42.9 bits (100), Expect = 2e-05
 Identities = 18/50 (36%), Positives = 30/50 (60%)

Query: 164 LSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHH 213
           +SP+FV   + NM AG ++I +G +GP+  ++TA  +G H IG +     
Sbjct: 128 ISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIA 177

>d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 95.7 bits (237), Expect = 2e-23
 Identities = 52/125 (41%), Positives = 73/125 (58%), Gaps = 4/125 (3%)

Query: 10  LSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGH-AIGDAFRLIQGGHADVMIA 68
           + P  +    PNM  +G +++   +      +   C   + AIGDAFR I+ G  DVM+ 
Sbjct: 135 VKPMTLPKALPNMA-SGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIKFGFQDVMLV 193

Query: 69  GAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHA 128
           G  E+ I+  +IA F  + AL+T    +P +AS PFDK R+GFVMGEGS +LVLE L+HA
Sbjct: 194 GGTEASITPFAIAGFQALTALST--TEDPTRASIPFDKDRNGFVMGEGSGMLVLESLEHA 251

Query: 129 LARSA 133
             R A
Sbjct: 252 EKRGA 256

>d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

 Score = 51.4 bits (122), Expect = 4e-08
 Identities = 14/56 (25%), Positives = 29/56 (51%)

Query: 158 QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHH 213
           +    ++ P  + + LPNM++G +++  G  G    ++TAC++   AIG +     
Sbjct: 129 EKGPKRVKPMTLPKALPNMASGNVAMRFGANGVCKSINTACSSSNDAIGDAFRSIK 184

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

 Score = 93.5 bits (231), Expect = 1e-22
 Identities = 45/135 (33%), Positives = 64/135 (47%), Gaps = 1/135 (0%)

Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGHAIGDAFRLIQG 60
           M        + PY V     + V A   +      V            H IG+A   IQ 
Sbjct: 120 MRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQL 179

Query: 61  GHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAIL 120
           G  D++ AG  E          F  + AL+T++N+ P +ASR +D  RDGFV+  G  ++
Sbjct: 180 GKQDIVFAGGGEELC-WEMACEFDAMGALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMV 238

Query: 121 VLEELDHALARSANI 135
           V+EEL+HALAR A+I
Sbjct: 239 VVEELEHALARGAHI 253

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

 Score = 87.7 bits (216), Expect = 1e-20
 Identities = 64/134 (47%), Positives = 84/134 (62%), Gaps = 3/134 (2%)

Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQ 59
           +L     +  SP+ +     NM  +G  +I++ +K    C    C  G +AIGDAFRL+Q
Sbjct: 119 ILLDKGPSRCSPFMIPMMIANM-ASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQ 177

Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQASRPFDKRRDGFVMGEGSAI 119
            G+A  MI G  E+ I+ LS A F   RAL+ + N++P  ASRPFDK RDGFVMGEGS I
Sbjct: 178 NGYAKAMICGGTEAAITPLSYAGFASARALSFR-NDDPLHASRPFDKDRDGFVMGEGSGI 236

Query: 120 LVLEELDHALARSA 133
           L+LEEL+ ALAR A
Sbjct: 237 LILEELESALARGA 250

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 79.9 bits (196), Expect = 3e-18
 Identities = 55/171 (32%), Positives = 73/171 (42%), Gaps = 11/171 (6%)

Query: 195 STACATGAHAIG------MSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAH 248
            +A A GA             + +H+T  + DGR     +  AL ++     DI YINAH
Sbjct: 32  DSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAH 91

Query: 249 ATSTPLGDVIELKAIGSLF--PAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVP 306
            + T   D  E  A        A+R  VSS K   GH LGA G+LE A  +LA+  G+VP
Sbjct: 92  GSGTRQNDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVP 151

Query: 307 PNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
           P  NL     E      P    E K    R  L    GFGG  + + + + 
Sbjct: 152 PTANLRTSDPECDLDYVPLEARERKL---RSVLTVGSGFGGFQSAMVLRDA 199

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 71.4 bits (174), Expect = 3e-15
 Identities = 37/124 (29%), Positives = 55/124 (44%), Gaps = 1/124 (0%)

Query: 95  NEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSN 154
           ++P  ASRPFD  RDGFV+ EG+A+ VLE+ D ALAR A I+AEI GY     +  ++  
Sbjct: 1   DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGL 60

Query: 155 NALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHL 214
            A      +     +     + +       HG            A    A+G       +
Sbjct: 61  KADGREMAETIRVALDESRTDATDIDYINAHGSG-TRQNDRHETAAYKRALGEHARRTPV 119

Query: 215 TSPR 218
           +S +
Sbjct: 120 SSIK 123

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 67.7 bits (164), Expect = 5e-14
 Identities = 24/104 (23%), Positives = 34/104 (32%)

Query: 96  EPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNN 155
           +P +A  PFD+R  G+V GEG AILVLE+   A AR  +     +            S  
Sbjct: 1   DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCASTFDPAPGSGR 60

Query: 156 ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACA 199
                             P       +   G    +   + A  
Sbjct: 61  PAGLERAIRLALNDAGTGPEDVDVVFADGAGVPELDAAEARAIG 104

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 66.5 bits (161), Expect = 1e-13
 Identities = 37/167 (22%), Positives = 58/167 (34%), Gaps = 7/167 (4%)

Query: 195 STACATGAHAIGMS----GDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHAT 250
           + A A G H                       G   A+  AL DA   P D+  + A   
Sbjct: 31  AAAEARGRHDAYGELAGCASTFDPAPGSGRPAGLERAIRLALNDAGTGPEDVDVVFADGA 90

Query: 251 STPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVN 310
             P  D  E +AIG +F  + + V+  K   G L    G L+    ++++ EG++ P   
Sbjct: 91  GVPELDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAG 150

Query: 311 LEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY 357
           +     E G                R AL  + G  G N+   +  +
Sbjct: 151 VTSVPREYGIDLVLGEPRSTAP---RTALVLARGRWGFNSAAVLRRF 194

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 58.5 bits (140), Expect = 1e-10
 Identities = 24/92 (26%), Positives = 44/92 (47%), Gaps = 2/92 (2%)

Query: 1   MLYRGATTTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGGH-AIGDAFRLIQ 59
             +      LS +  +   P++     ++  + ++     V   C  G  ++G+A R I+
Sbjct: 124 RDWEVDAAWLSRHMFDYLVPSV-MPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIE 182

Query: 60  GGHADVMIAGAAESCISQLSIAAFCRVRALAT 91
            G ADVM AGAA++ I+ + +A F  +RA   
Sbjct: 183 EGSADVMFAGAADTPITPIVVACFDAIRATTA 214

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

 Score = 50.5 bits (119), Expect = 5e-08
 Identities = 16/81 (19%), Positives = 33/81 (40%), Gaps = 2/81 (2%)

Query: 12  PYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLCYGG-HAIGDAFRLIQGGHADVMIAGA 70
             + +  +   V  G ISI    +  +  +     GG  A+G A R I+ G   ++++G 
Sbjct: 127 SVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGG 185

Query: 71  AESCISQLSIAAFCRVRALAT 91
            +S +      +      ++T
Sbjct: 186 VDSALDPWGWVSQIASGRIST 206

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	359
d1tqya2	205	Actinorhodin polyketide putative beta-ketoacyl syn	100.0
d1tqyb2	194	Actinorhodin polyketide putative beta-ketoacyl syn	100.0
d1e5ma2	161	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	100.0
d1ox0a2	158	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	100.0
d2gfva2	161	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	100.0
d1j3na2	159	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	100.0
d2ix4a2	161	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	99.98
d2vbaa2	151	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	99.97
d2ix4a1	270	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	99.91
d1ox0a1	256	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	99.9
d2gfva1	250	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	99.9
d2vbaa1	253	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	99.9
d1j3na1	249	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	99.89
d1e5ma1	250	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	99.88
d1tqyb1	208	Actinorhodin polyketide putative beta-ketoacyl syn	99.54
d1tqya1	216	Actinorhodin polyketide putative beta-ketoacyl syn	99.48
d1ulqa2	125	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	99.39
d1wdkc2	128	Fatty oxidation complex beta subunit (3-ketoacyl-C	99.34
d1afwa2	124	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	99.33
d1m3ka2	124	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	99.32
d1teda_	372	Polyketide synthase PKS18 {Mycobacterium tuberculo	98.78
d1m3ka1	268	Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3	98.35
d1wdkc1	262	Fatty oxidation complex beta subunit (3-ketoacyl-C	98.35
d1ulqa1	273	Beta-ketoadipyl CoA thiolase {Thermus thermophilus	98.33
d1afwa1	269	Thiolase {Baker's yeast (Saccharomyces cerevisiae)	98.29
d1u6ea1	184	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	98.25
d1hnja1	174	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	98.25
d1ub7a1	172	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	98.13
d1mzja1	181	Priming beta-ketosynthase from the r1128 polyketid	98.12
d1xpma1	166	3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap	97.78
d1u0ma1	200	Putative polyketide synthase SCO1206 {Streptomyces	97.68
d1bi5a1	235	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	97.14
d1tqyb1	208	Actinorhodin polyketide putative beta-ketoacyl syn	97.13
d1ox0a1	256	Beta-ketoacyl-ACP synthase II {Streptococcus pneum	96.73
d1ub7a2	149	Ketoacyl-ACP synthase III (FabH) {Thermus thermoph	96.54
d2gfva1	250	Beta-ketoacyl-ACP synthase II {Escherichia coli [T	96.47
d1j3na1	249	Beta-ketoacyl-ACP synthase II {Thermus thermophilu	96.42
d1u6ea2	148	Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu	96.31
d2vbaa1	253	Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta	96.08
d1e5ma1	250	Beta-ketoacyl-ACP synthase II {Synechocystis sp. [	95.58
d1hnja2	143	Ketoacyl-ACP synthase III (FabH) {Escherichia coli	95.47
d2ix4a1	270	Beta-ketoacyl-ACP synthase II {Thale cress (Arabid	94.98
d1tqya1	216	Actinorhodin polyketide putative beta-ketoacyl syn	94.75
d1u0ma2	148	Putative polyketide synthase SCO1206 {Streptomyces	93.59
d1mzja2	153	Priming beta-ketosynthase from the r1128 polyketid	93.37
d1ee0a2	160	Pyrone synthase (PyS, chalcone synthase 2) {Gerber	93.07
d1bi5a2	154	Chalcone synthase {Alfalfa (Medicago sativa) [TaxI	92.18
d1u0ua2	156	Dihydropinosylvin synthase {Scots pine (Pinus sylv	90.13

>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=2.2e-42  Score=301.57  Aligned_cols=198  Identities=41%  Similarity=0.584  Sum_probs=184.5

Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                      ++|++.|||||.+++|+++|||+++++||+.+++.++|++||++|.|++                               
T Consensus         1 ~~P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~-------------------------------   49 (205)
T d1tqya2           1 DDPEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYA-------------------------------   49 (205)
T ss_dssp             SCGGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEE-------------------------------
T ss_pred             CCCCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeE-------------------------------
Confidence            4689999999999999999999999999999999999999999999987                               


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCc
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPL  254 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~  254 (359)
                                                      ...++.....+.+.+....++++++|++++++|+||+|||.|++||+.
T Consensus        50 --------------------------------~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~~~i~~ie~hgtGt~~   97 (205)
T d1tqya2          50 --------------------------------TRCNAYHMTGLKADGREMAETIRVALDESRTDATDIDYINAHGSGTRQ   97 (205)
T ss_dssp             --------------------------------EEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCCCHH
T ss_pred             --------------------------------ccccccccCcccccccccchhhhhHHhhhcCCccceeeeecccccccc
Confidence                                            555566666777788889999999999999999999999999999999


Q ss_pred             ccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCccccccc
Q psy5293         255 GDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKT  332 (359)
Q Consensus       255 ~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~  332 (359)
                      +|+.|++++..+|+  ..+++|++.|+++||+++|||++++++++++|++|+|||+.|++.++|+++.++++.+..+++ 
T Consensus        98 ~D~~E~~ai~~~~~~~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~p~~~~~~v~~~~~~~~-  176 (205)
T d1tqya2          98 NDRHETAAYKRALGEHARRTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPTANLRTSDPECDLDYVPLEARERK-  176 (205)
T ss_dssp             HHHHHHHHHHHHTGGGGGGSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCBTTCCSBBTTBCSCCCBSSCEECC-
T ss_pred             CchhHHHHHHHhhccccCCceeeeecccccccccccchhHHHHHHHHHhCCeEcccCCCCCCCCCCCcccCCCCCcCCC-
Confidence            99999999999997  457899999999999999999999999999999999999999999999999888888877776 


Q ss_pred             CCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         333 DGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       333 ~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                        .|++++++|||||+|+|+||++++
T Consensus       177 --~~~a~~~s~GfGG~na~~vl~~~~  200 (205)
T d1tqya2         177 --LRSVLTVGSGFGGFQSAMVLRDAE  200 (205)
T ss_dssp             --CSEEEEEEEETTTEEEEEEEECHH
T ss_pred             --CCEEEEeCCCCCceeEEEEEeeCC
Confidence              899999999999999999999874

>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=1.9e-41  Score=292.79  Aligned_cols=193  Identities=30%  Similarity=0.410  Sum_probs=173.5

Q ss_pred             CCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCC-cEEEEEeecccccchhhhhhhhhhcccccccCcchhhcccC
Q psy5293          96 EPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSA-NIYAEIIGYGMIDLSDVLSSNNALQGSYNKLSPYFVTRILP  174 (359)
Q Consensus        96 ~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~-~i~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~  174 (359)
                      +|++.|||||.+++|+++|||+++++||+.+++.++|+ +||++|.+++                               
T Consensus         1 ~p~~~~rPFD~~a~G~~~gEGa~~~vLe~~~~A~~rg~~~i~a~i~g~~-------------------------------   49 (194)
T d1tqyb2           1 DPDRAYLPFDERAAGYVPGEGGAILVLEDSAAAEARGRHDAYGELAGCA-------------------------------   49 (194)
T ss_dssp             CGGGSCCTTSTTCCCBCBBCEEEEEEEEEHHHHHHHTCCCCSEEEEEEE-------------------------------
T ss_pred             CCCCCcCcccCCCCCEeeEeeEEEEEEeEHHHHHhcCCceeeeeeeccc-------------------------------
Confidence            47889999999999999999999999999999999997 5999999876                               


Q ss_pred             CcchhhhHHHhccCCCCcccccccccCcccccccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCc
Q psy5293         175 NMSAGQISIEHGFQGPNHCVSTACATGAHAIGMSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPL  254 (359)
Q Consensus       175 ~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~  254 (359)
                                                      ...++.... +.+  .+.+++|+++|++++++|+||+|++.|++||+.
T Consensus        50 --------------------------------~~~d~~~~~-~~~--~g~~~~i~~aL~~a~i~~~di~~v~ahgtGt~~   94 (194)
T d1tqyb2          50 --------------------------------STFDPAPGS-GRP--AGLERAIRLALNDAGTGPEDVDVVFADGAGVPE   94 (194)
T ss_dssp             --------------------------------EEECCCTTC-CCC--CSHHHHHHHHHHHHTCCGGGCCEEECCCCCSHH
T ss_pred             --------------------------------ccccccccc-cch--hhhhhhhhhhcccccccccceeeeeccccCccc
Confidence                                            222232221 222  346789999999999999999999999999999


Q ss_pred             ccHHHHHHHHhhcCCCCceecccccccchHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCC
Q psy5293         255 GDVIELKAIGSLFPAQRLMVSSTKGAHGHLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDG  334 (359)
Q Consensus       255 ~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~  334 (359)
                      +|..|+++|.++|+...++|++.|+++||+++|||++++++++++|++|+|||++|+++++|+++.+.++.++.+++   
T Consensus        95 ~D~~E~~al~~~f~~~~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~~~~~~~~~~~~~~~v~~~~~~~~---  171 (194)
T d1tqyb2          95 LDAAEARAIGRVFGREGVPVTVPKTTTGRLYSGGGPLDVVTALMSLREGVIAPTAGVTSVPREYGIDLVLGEPRSTA---  171 (194)
T ss_dssp             HHHHHHHHHHHHHCTTCSEEECGGGGTCBCGGGHHHHHHHHHHHHHHHTSBCCBCSCCCCCGGGCCEECBSSCBCCC---
T ss_pred             ccHHHhhhhhhhhhccccccccccccccccccccccceehhhhhhhhhceeccccCCCCCCcccCccccCCCCccCC---
Confidence            99999999999998778999999999999999999999999999999999999999999999998888877776665   


Q ss_pred             ccEEEEeCcCcCcceeeEEEeec
Q psy5293         335 RRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       335 ~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      .|++++++|||||+|+|+||+||
T Consensus       172 ~~~a~v~s~GfgG~na~~vl~~~  194 (194)
T d1tqyb2         172 PRTALVLARGRWGFNSAAVLRRF  194 (194)
T ss_dssp             CSEEEEEEEETTTEEEEEEEEEC
T ss_pred             CCEEEEECcCCCceeEEEEEeeC
Confidence            79999999999999999999997

>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=100.00  E-value=1.4e-35  Score=248.20  Aligned_cols=149  Identities=46%  Similarity=0.679  Sum_probs=141.3

Q ss_pred             ccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchH
Q psy5293         207 MSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHL  284 (359)
Q Consensus       207 ~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~  284 (359)
                      .+.|+.+...|.|++.++.++++++|++++++|+||+|+|+|++||+.+|..|..++..+|+  ...++|++.|+++||+
T Consensus        11 ~~~Dg~~~~~~~p~g~~~~~~i~~Al~~a~i~~~~i~~v~~HgtGT~~~D~~E~~al~~vf~~~~~~~~v~s~K~~~GH~   90 (161)
T d1e5ma2          11 MTCDAYHITAPVPDGRGATRAIAWALKDSGLKPEMVSYINAHGTSTPANDVTETRAIKQALGNHAYNIAVSSTKSMTGHL   90 (161)
T ss_dssp             EEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGGGSEEECTHHHHCBC
T ss_pred             EeCCCCCCCCCCcCHHHHHHHHHHHHHHcCCChhhcceEEEeccCCcccchHHhhhhhhccccCCCcceEEecccccccc
Confidence            77788888889999999999999999999999999999999999999999999999999997  3468999999999999


Q ss_pred             HHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         285 LGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       285 ~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      ++|||++++++++++|++++|||++|+++|+|.+...+++.+..+|+   .+++++|+|||||+|+|+||+||+
T Consensus        91 ~~AsG~~~l~~~l~~~~~g~ipp~~~~~~~~~~~~~~~~~~~~~~~~---~~~a~~nsfGfGG~Na~lvl~~y~  161 (161)
T d1e5ma2          91 LGGSGGIEAVATVMAIAEDKVPPTINLENPDPECDLDYVPGQSRALI---VDVALSNSFGFGGHNVTLAFKKYQ  161 (161)
T ss_dssp             GGGHHHHHHHHHHHHHHHTEECCBTTCSSBCTTCCSCCCBSSCEECC---CSEEEEEEEETTTEEEEEEEECCC
T ss_pred             cccchhhHHHHhHHhcccCeeCCccCCCCCCCCCCcccCcCcccCCC---CCEEEEeCcCcCcEeEEEEEeeeC
Confidence            99999999999999999999999999999999999888888888777   799999999999999999999996

>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Streptococcus pneumoniae [TaxId: 1313]

Probab=100.00  E-value=4.6e-35  Score=244.23  Aligned_cols=148  Identities=37%  Similarity=0.528  Sum_probs=140.5

Q ss_pred             ccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHH
Q psy5293         207 MSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLG  286 (359)
Q Consensus       207 ~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~  286 (359)
                      .+.|+.+...|.+++.+..++++++|+++++.|+||+|++.|++||+.+|..|+.++.++|+ +.++|++.|+++||+++
T Consensus        11 ~~~Dg~~~~~p~p~g~~~~~~~~~al~~a~l~p~~i~~v~aHgtgT~~~D~~E~~ai~~~fg-~~~~v~s~Ks~iGH~~~   89 (158)
T d1ox0a2          11 NTCDAYHMTSPHPEGQGAIKAIKLALEEAEISPEQVAYVNAHGTSTPANEKGESGAIVAVLG-KEVPVSSTKSFTGHLLG   89 (158)
T ss_dssp             EEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCCEECCCCSCHHHHHHHHHHHHHHHC-SSSEEECTHHHHCBCGG
T ss_pred             EcCCCCCCcCCCCCHHHHHHHHHHhhccccccceeeeEEeeeccccccchhHHHHHHHHhcC-CcccCcCcccccccchh
Confidence            77788889999999999999999999999999999999999999999999999999999997 57999999999999999


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         287 AAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       287 AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      |||++++++++++|++++|||++|+++++|+++...++.+..+++   .|++++|||||||+|+|+||+||+
T Consensus        90 asG~~~l~~~l~~l~~g~iPp~~~~~~~~~~~~~~~~~~~~~~~~---~~~a~~nsfGfGG~Na~lvl~~~~  158 (158)
T d1ox0a2          90 AAGAVEAIVTIEAMRHNFVPMTAGTSEVSDYIEANVVYGQGLEKE---IPYAISNTFGFGGHNAVLAFKRWE  158 (158)
T ss_dssp             GHHHHHHHHHHHHHHHTEECCBSSCCSBCTTCCSEECBSSCEECC---CSEEEEEEEETTTEEEEEEEECCC
T ss_pred             hhhhhhhcccccccccceeccccCCCCCCcccCcccccCccccCC---CCEEEEeCcCCCcEeEEEEEEecC
Confidence            999999999999999999999999999999998888888777665   799999999999999999999996

>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=1e-33  Score=237.11  Aligned_cols=149  Identities=48%  Similarity=0.740  Sum_probs=135.5

Q ss_pred             ccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchH
Q psy5293         207 MSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHL  284 (359)
Q Consensus       207 ~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~  284 (359)
                      .+.|+.....|.+++.+..+++++++++++++|+||+|+|.|++||+.+|+.|+.+|..+|+  ...++|++.|+++||+
T Consensus        11 ~~~Dg~~~~~~~p~g~~~~~~~~~al~~a~i~p~~i~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~s~Ks~~GH~   90 (161)
T d2gfva2          11 MSSDAYHMTSPPENGAGAALAMANALRDAGIEASQIGYVNAHGTSTPAGDKAEAQAVKTIFGEAASRVLVSSTKSMTGHL   90 (161)
T ss_dssp             EEECCSCSSSCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHGGGGTTSEEECTHHHHCBC
T ss_pred             EeCCCCCCCCCCCCHHHHHHHHHHhHhhcccCcceEEEEEeecccCcccHHHHHHHHHHHhccccccceecccccccccc
Confidence            66677788888889999999999999999999999999999999999999999999999997  4578999999999999


Q ss_pred             HHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         285 LGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       285 ~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      ++|||++++++++++|++++|||++|+++|+|......++.+..++  .+.|++++|+|||||+|+|+||+|.
T Consensus        91 ~~AsG~~~li~~ll~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~--~~~~~a~vnsfGfgG~Na~lil~~~  161 (161)
T d2gfva2          91 LGAAGAVESIYSILALRDQAVPPTINLDNPDEGCDLDFVPHEARQV--SGMEYTLCNSFGFGGTNGSLIFKKI  161 (161)
T ss_dssp             GGGHHHHHHHHHHHHHHSCEECCBTTCSSBCTTCCSBCCBSSCEEC--SSCCEEEEEEEEGGGEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHhcCCEecccccccccccccccccccccCccC--CCCcEEEEeCcCccceeEEEEEEEC
Confidence            9999999999999999999999999999999988776665554433  3479999999999999999999984

>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=2.7e-33  Score=233.93  Aligned_cols=147  Identities=52%  Similarity=0.755  Sum_probs=134.4

Q ss_pred             ccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchH
Q psy5293         207 MSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHL  284 (359)
Q Consensus       207 ~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~  284 (359)
                      .+.|+.+...|.+++.+...+++++|++++++|+||+|+|+|++||+.+|+.|+.++..+|+  ..+++|++.|+++||+
T Consensus        11 ~~~Dg~~~~~~~p~g~~~~~~~~~al~~agi~p~~I~~ie~HgtGT~~gD~~E~~Al~~~f~~~~~~~~i~s~K~~~GH~   90 (159)
T d1j3na2          11 RSADAHHITEPHPEGKGAALAMARALKDAGIAPEQVGYINAHGTSTPVGDRAEVLAIKRVFGDHAKRLMVSSTKSMIGHL   90 (159)
T ss_dssp             EEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHHHHHTTCEEECTHHHHCBC
T ss_pred             EeCCCCCCCCCCcCHHHHHHHhhccHhhcCCCHHHcCeEeccccCCccchHHHHHHHHHHHHhcCCCceEeccccccccc
Confidence            66778888889999999999999999999999999999999999999999999999999996  4568999999999999


Q ss_pred             HHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         285 LGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       285 ~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      ++|||++++++++++|++++|||++|+++++|++....++. .++++   .+++++|+|||||+|+|+||+|.
T Consensus        91 ~~asG~~~li~~~~~l~~~~ipp~~~~~~~~~~~~~~~~~~-~~~~~---~~~a~v~sfGfgG~Na~~vl~kv  159 (159)
T d1j3na2          91 LGAAGAVEAIATVQALYHGVIPPTINLEDPDPELDLDFVPE-PREAK---VDYALSNSFAFGGHNAVLAFKRV  159 (159)
T ss_dssp             GGGHHHHHHHHHHHHHHHTEECCCTTTTSBCTTSCSBCCSS-CEECC---CSEEEEEEECTTSEEEEEEEECC
T ss_pred             ccccccchhhhhhhHhhCCEeccccccccccceeeeeccCc-ccCCC---CCEEEEeCCCCCceeEEEEEEEC
Confidence            99999999999999999999999999999999988765543 33333   79999999999999999999984

>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=99.98  E-value=5.5e-33  Score=232.50  Aligned_cols=148  Identities=53%  Similarity=0.829  Sum_probs=135.6

Q ss_pred             ccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC----CCCceecccccccc
Q psy5293         207 MSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP----AQRLMVSSTKGAHG  282 (359)
Q Consensus       207 ~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~----~~~~~v~~~k~~~G  282 (359)
                      .+.|+.+++.|++++++...++++++++++++|+||+|+|.|++||+.+|+.|+.++..+|+    ..+++|++.|+++|
T Consensus         9 ~~~Dg~~~t~p~~~g~~~~~~~~~al~~a~~~~~di~yveaHGtGT~~gD~~E~~al~~~~~~~~~~~~~~i~s~K~~~G   88 (161)
T d2ix4a2           9 MSGDAHHITQPPEDGKGAVLAMTRALRQSGLCPNQIDYVNAHATSTPIGDAVEARAIKTVFSEHATSGTLAFSSTKGATG   88 (161)
T ss_dssp             EEECCSCSSCCCTTCHHHHHHHHHHHHHHTCCGGGCCEEECCCCSCHHHHHHHHHHHHHHHTHHHHTSCSEEECTHHHHC
T ss_pred             EcCCCCCCcCCChhHHHHHHHHHHHHHhcCCCccccCEEEEeccCCCCCcHHHHhhhHhhhcccccccceeeeccccccC
Confidence            77788889999999999999999999999999999999999999999999999999999997    35689999999999


Q ss_pred             hHHHhHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCc-ccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         283 HLLGAAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTA-VTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       283 h~~~AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      |+++|||++++++++++|+++.|||++|+++|+|.++...++.. .+++.   .|++++|+|||||+|+|+||++.
T Consensus        89 H~~~AsG~~~li~~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~~---~~~a~~nsfGfgG~Na~lvl~~~  161 (161)
T d2ix4a2          89 HLLGAAGAVEAIFSILAIHHGVAPMTLNVKNPDPIFDKRFMPLTTSKKML---VRTAMSNSFGFGGTNASLLFASI  161 (161)
T ss_dssp             BCGGGHHHHHHHHHHHHHHHTEECCCTTCSSBCTTCCSSSCCCSSCEECC---CSEEEEEEEETTTEEEEEEEECC
T ss_pred             CccchHHHHHHHHHHHHHhcCCCCCccCCCCCCcccCcccCccccCCCCC---cCEEEEeCCcccceeEEEEEEeC
Confidence            99999999999999999999999999999999999987766533 33333   79999999999999999999974

>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=99.97  E-value=1.6e-31  Score=220.75  Aligned_cols=143  Identities=39%  Similarity=0.661  Sum_probs=130.9

Q ss_pred             ccCCCccCCCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcCCCCceecccccccchHHH
Q psy5293         207 MSGDGHHLTSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFPAQRLMVSSTKGAHGHLLG  286 (359)
Q Consensus       207 ~~~~~~~~~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~~~~~~v~~~k~~~Gh~~~  286 (359)
                      .+.|+.+++.|  ++.+..+++++++.++   ++||||++.|++||+.+|+.|+.++.++|+.+.++|++.|+++||+++
T Consensus         9 ~~~Dg~~~taP--~~~~~~~~~~~al~~a---~~~I~~v~aHgtGT~~gD~~E~~Al~~vfg~~~~~v~s~K~~~GH~~~   83 (151)
T d2vbaa2           9 ATSDGADMVAP--SGEGAVRCMKMAMHGV---DTPIDYLNSHGTSTPVGDVKELAAIREVFGDKSPAISATKAMTGHSLG   83 (151)
T ss_dssp             EEECCSCTTSC--CSHHHHHHHHHHHTTC---CSCCCEEECCCCSCHHHHHHHHHHHHHHHTTCCCEEECTHHHHCBCGG
T ss_pred             EecCCCCCCCc--CHHHHHHHHHHhhhcC---cccceeEEEeccCCccccHHHHHHHHHHhCCCCcccccchhhcccccc
Confidence            56667777776  4567789999999766   679999999999999999999999999999888899999999999999


Q ss_pred             hHHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         287 AAGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       287 AsG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      |||++++++++++|+++.|||++|+++++|+.....++.+..+|+   .+.+++++|||||+|+|+||+|.
T Consensus        84 asG~~~l~~~~~~l~~~~ipp~~~~~~~~~~~~~~~v~~~~~~~~---~~~a~~nsfGfGG~Na~~vl~~v  151 (151)
T d2vbaa2          84 AAGVQEAIYSLLMLEHGFIAPSINIEELDEQAAGLNIVTETTDRE---LTTVMSNSFGFGGTNATLVMRKL  151 (151)
T ss_dssp             GHHHHHHHHHHHHHHHTEECCCCCCSSBCTTCTTSEECCSCEECC---CCEEEEEEEETTTEEEEEEEECC
T ss_pred             chhhhhhhHHHHHHHcCCcccccCccccccccccccccCcCcCCC---CCEEEEeCCcccceeEEEEEEEC
Confidence            999999999999999999999999999999988888888888887   79999999999999999999984

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=99.91  E-value=5e-25  Score=198.91  Aligned_cols=127  Identities=50%  Similarity=0.819  Sum_probs=122.4

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.+.|+.++.+++|+ ++++|++.||++||+++|+++| |++.||.+|+++|++|+||++||||+|....+..+..+...
T Consensus       143 ~~~~~~~~~~~~~~~-~a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~A~~~l~~G~~d~aivgg~~~~~~p~~~~~~~~~  221 (270)
T d2ix4a1         143 RRLSPFFIPKILVNM-ASGHVSMKYGFQGPNHAAVTACATGAHSIGDATRMIQFGDADVMVAGGTESSIDALSVAGFSRS  221 (270)
T ss_dssp             GGCCTTHHHHHCTTH-HHHHHHHHHTCCSCEECBCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccCcccCcccccch-hHHHHHHHhCCCCCCcccccccchhhHHHHHHHHHHHcCCCCeeccccchhhhhhhhHHHHHhc
Confidence            678899999999999 9999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcE
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANI  135 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i  135 (359)
                      ++++...+++|++.|+|||.+++|+++|||+++++||+.++|+++|++|
T Consensus       222 ~~ls~~~~~~p~~~~rPFD~~a~G~v~gEGaa~~vLe~l~~A~~rG~~I  270 (270)
T d2ix4a1         222 RALSTKFNSSPQEASRPFDCDRDGFVIGEGSGVIVLEEYEHAKRRGAKI  270 (270)
T ss_dssp             TCBCCTTTTCGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred             ccccCCCCCCCCCccCCCCCCCCCEeeEeeEEEEEEeeHHHHHHccCCC
Confidence            9999876778899999999999999999999999999999999999986

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=1.7e-24  Score=193.80  Aligned_cols=124  Identities=44%  Similarity=0.711  Sum_probs=117.3

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..++|+.++.+++|+ ++++|++.||++||+++|+++| ||+.||.+|+++|++|++|++||||+|..+++..+..|..+
T Consensus       126 ~~~~~~~~~~~~~~~-~a~~ia~~~gl~Gp~~tv~~aCaSg~~Ai~~A~~~i~~G~~d~~lvgg~d~~~~~~~~~~f~~~  204 (250)
T d2gfva1         126 RKISPFFVPSTIVNM-VAGHLTIMYGLRGPSISIATAQTSGVHNIGHAARIIAYGDADVMVAGGAEKASTPLGVGGFGAA  204 (250)
T ss_dssp             GGSCTTHHHHHSTTH-HHHHHHHHTTCCSCEECCCCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccccchhhhhhhhH-HHHHHHHHhCCCCCccccccccchhhhhhHHHHHHHHcCCcchhhcccchhhcCcHHHHHHHhc
Confidence            678999999999999 9999999999999999999999 99999999999999999999999999998999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCC
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSA  133 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~  133 (359)
                      +.++.. +++|.+.|||||.+++|+++|||+++++||++++|.+||+
T Consensus       205 ~~ls~~-~~~p~~~~rPFD~~rdG~v~gEGaa~lVLE~~~~A~~rGA  250 (250)
T d2gfva1         205 RALSTR-NDNPQAASRPWDKERDGFVLGDGAGMLVLEEYEHAKKRGA  250 (250)
T ss_dssp             TCBCCC-TTCHHHHCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHHTC
T ss_pred             ccccCC-CCCCCCccCCCCCCCCCEeeeeEEEEEEECcHHHHHHCcC
Confidence            999864 4457788999999999999999999999999999999884

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=99.90  E-value=2.4e-24  Score=192.98  Aligned_cols=126  Identities=33%  Similarity=0.584  Sum_probs=117.6

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.++..++|. ++++|++.+|++||+++|+++| ||+.||.+|+++|++|++|++||||+|. ..+.....+..+
T Consensus       127 ~~~~~~~~~~~~~~~-~a~~is~~~g~~Gp~~~i~taCaSsl~Ai~~A~~~i~~G~~d~alvgg~~~-~~~~~~~~~~~~  204 (253)
T d2vbaa1         127 KAVGPYVVTKAMASG-VSACLATPFKIHGVNYSISSACATSAHCIGNAVEQIQLGKQDIVFAGGGEE-LCWEMACEFDAM  204 (253)
T ss_dssp             HHHCTTHHHHHSTTH-HHHHHHTTTTCCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEC-CCHHHHHHHHHT
T ss_pred             cccCchhhhcccccc-ccceeccccCcccceeeeeccchhHHHHHHHHHHhcchhccceeeecchhh-hhcchhhhHHHH
Confidence            567899999999999 9999999999999999999999 9999999999999999999999999998 555567788899


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCCcE
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSANI  135 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~~i  135 (359)
                      +.++...+++|++.|+|||.+++|+++|||+++++||++++|++||++|
T Consensus       205 ~~ls~~~~~~P~~~~rPFD~~~~G~v~gEGa~~lvLe~le~A~~rGa~I  253 (253)
T d2vbaa1         205 GALSTKYNDTPEKASRTYDAHRDGFVIAGGGGMVVVEELEHALARGAHI  253 (253)
T ss_dssp             TCBCCSCTTSGGGSCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTCCC
T ss_pred             HHHhcCCCCCCCCCCCCCCCCCCCEeeeeEEEEEEEccHHHHHHccCcC
Confidence            9998776778999999999999999999999999999999999999876

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=99.89  E-value=9.2e-24  Score=188.84  Aligned_cols=124  Identities=44%  Similarity=0.748  Sum_probs=116.9

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.+...++|+ ++++|++.||++||+++|+++| |++.||.+|+++|++|++|++||||+|....+..+..|..+
T Consensus       125 ~~~~~~~~~~~~~~~-~~~~is~~~gl~Gp~~tv~~aCaSsl~Ai~~A~~~i~~G~~d~alvgg~d~~~~p~~~~~f~~~  203 (249)
T d1j3na1         125 NRISPFFIPMMIANM-ASAHIAMRYGFTGPSSTVVTACATGADALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVM  203 (249)
T ss_dssp             GGSCTTHHHHHSTTH-HHHHHHHHHTCCSCBCCBCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccChhhhccccchh-hhhhhHhhcCCCCCccccccccchHHHHHHHHHHHHHcCCCCeeeecchHhhhCcHHHHHHHhC
Confidence            678999999999999 9999999999999999999999 99999999999999999999999999998999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCC
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSA  133 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~  133 (359)
                      +.++.. ++.|++.|+|||.+++|+++|||+++++||+.++|++||+
T Consensus       204 ~~ls~~-~~~p~~~~rPFd~~~dG~v~gEGa~~lvLe~~~~A~~rGA  249 (249)
T d1j3na1         204 RALSTR-NEEPEKASRPFTLSRDGFVMGEGAGVLVLEAYEHAKKRGA  249 (249)
T ss_dssp             TCBCCC-TTCHHHHCCTTBTTCCCBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred             CcccCC-CCCCCCCCCCccCCCCCEeeEeEEEEEEEccHHHHHHCcC
Confidence            999853 4456788999999999999999999999999999999884

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=99.88  E-value=3.2e-23  Score=185.15  Aligned_cols=124  Identities=51%  Similarity=0.846  Sum_probs=117.3

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..+.|+.+..++.|. +++++++.||++||+++|+++| ||+.||.+|+++|++|++|++||||+|..+++..+..|..+
T Consensus       126 ~~~~~~~~~~~~~~~-~a~~is~~~gl~Gp~~tv~~ACsS~l~Ai~~A~~~i~~G~~d~~lvGg~~~~~~~~~~~~f~~~  204 (250)
T d1e5ma1         126 SRCSPFMIPMMIANM-ASGLTAINLGAKGPNNCTVTACAAGSNAIGDAFRLVQNGYAKAMICGGTEAAITPLSYAGFASA  204 (250)
T ss_dssp             GGSCTTHHHHHSTTH-HHHHHHHHHTCCSCEECCCCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             cccCcccchhhhcch-hhhhHHHhccCCCCCccccccchhhhhhhHHHhhcccCCcccccccccchhhcCcHHHHHHHhc
Confidence            678899999999999 9999999999999999999999 99999999999999999999999999998999999999999


Q ss_pred             ccccccCCCCCCCCCCCccCCCCCceecceeeEEeecchHHHHhcCC
Q psy5293          87 RALATQFNNEPAQASRPFDKRRDGFVMGEGSAILVLEELDHALARSA  133 (359)
Q Consensus        87 ~~l~~~~~~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~~a~~~g~  133 (359)
                      +.++.. +++|.+.|+|||.+++|+++|||+++++||++++|++||+
T Consensus       205 ~~ls~~-~~~p~~~~rPFD~~~dG~~~gEGa~~~vLe~l~~A~~rGA  250 (250)
T d1e5ma1         205 RALSFR-NDDPLHASRPFDKDRDGFVMGEGSGILILEELESALARGA  250 (250)
T ss_dssp             TCBCCC-TTCGGGTCCTTBTTCCSBCBBCEEEEEEEEEHHHHHHTTC
T ss_pred             CCccCC-CCCCCCccCCCCCCCCCEeeEeeEEEEEEeeHHHHHHCcC
Confidence            999853 5567889999999999999999999999999999999884

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.54  E-value=2.4e-15  Score=129.66  Aligned_cols=82  Identities=21%  Similarity=0.276  Sum_probs=79.5

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      +.++|+.+..+++|+ ++++|++.||++||+++|+++| ||+.||.+|+++|++| +|++||||+|.+++|..+..|..+
T Consensus       124 ~~~~~~~~~~~~~~~-~a~~ia~~~gl~Gp~~tv~tACaS~l~Ai~~A~~~I~~G-~d~~lvGG~d~~l~p~~~~~f~~~  201 (208)
T d1tqyb1         124 KSVSVYESFAWFYAV-NTGQISIRHGMRGPSSALVAEQAGGLDALGHARRTIRRG-TPLVVSGGVDSALDPWGWVSQIAS  201 (208)
T ss_dssp             GGSCTTHHHHSSTTH-HHHHHHHHHTCCSSCEEEECGGGHHHHHHHHHHHHHHHT-CSEEEEEEEECCCSHHHHHHHHTT
T ss_pred             ccccccccccccccc-ccchhhhcccccceeeeccccccHHHHHHHHHHHHHHcC-CCEEEECccccccCHHHHHHHHHc
Confidence            678999999999999 9999999999999999999999 9999999999999999 999999999999999999999999


Q ss_pred             ccccc
Q psy5293          87 RALAT   91 (359)
Q Consensus        87 ~~l~~   91 (359)
                      ++|++
T Consensus       202 ~~lSt  206 (208)
T d1tqyb1         202 GRIST  206 (208)
T ss_dssp             SCBCC
T ss_pred             CCCCC
Confidence            99984

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=99.48  E-value=2.4e-14  Score=124.03  Aligned_cols=83  Identities=29%  Similarity=0.436  Sum_probs=79.3

Q ss_pred             CCCCcccccccCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhh
Q psy5293           8 TTLSPYFVNPFFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRV   86 (359)
Q Consensus         8 ~~~~~~~~~~~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~   86 (359)
                      ..+.++.++..++|+ ++.+|++.+|++||+++++++| ||+.||.+|+++|++|++|++||||+|..+++..+..|..+
T Consensus       131 ~~~~~~~~~~~~~~~-~a~~ia~~~g~~Gp~~tv~~ACaS~~~Ai~~A~~~i~~G~~d~~ivGG~d~~l~p~~~~~F~~~  209 (216)
T d1tqya1         131 AWLSRHMFDYLVPSV-MPAEVAWAVGAEGPVTMVSTGCTSGLDSVGNAVRAIEEGSADVMFAGAADTPITPIVVACFDAI  209 (216)
T ss_dssp             GGCCTTTHHHHSTTH-HHHHHHHHHTCCSCEEEECCGGGHHHHHHHHHHHHHHHTSCSEEEEEEEECCCSHHHHHHHHHT
T ss_pred             hhcccccccccCchH-HHHHHHHhcCccccceeeccccchHHHHHHHHHHHHHcCCCCEEEEeeeccccCHHHHHHHHHC
Confidence            467788899999999 9999999999999999999999 99999999999999999999999999999999999999999


Q ss_pred             ccccc
Q psy5293          87 RALAT   91 (359)
Q Consensus        87 ~~l~~   91 (359)
                      ++|+.
T Consensus       210 ~alS~  214 (216)
T d1tqya1         210 RATTA  214 (216)
T ss_dssp             TCBCC
T ss_pred             CCCCc
Confidence            99984

>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=99.39  E-value=2e-13  Score=105.74  Aligned_cols=106  Identities=24%  Similarity=0.242  Sum_probs=85.5

Q ss_pred             CCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHh--h--cC--CCCceecccccccchHHHhH
Q psy5293         215 TSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGS--L--FP--AQRLMVSSTKGAHGHLLGAA  288 (359)
Q Consensus       215 ~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~--~--~~--~~~~~v~~~k~~~Gh~~~As  288 (359)
                      ..|..++.++..+++++|++++++++|||++|.|       |++..+.+..  .  ++  ..++++++....+|||+|||
T Consensus        14 ~~P~~~~~~P~~A~~~~L~r~gl~~~Did~~Ein-------EAFAaq~l~~~~~~~l~~d~~kvN~~GGaIAlGHP~GAS   86 (125)
T d1ulqa2          14 VPPRIMGIGPVPATRKALERAGLSFSDLGLIELN-------EAFAAQALAVLREWSLSMEDQRLNPNGGAIALGHPLGAS   86 (125)
T ss_dssp             CCGGGGGGTHHHHHHHHHHHTTCCGGGCSEEEEC-------CSBHHHHHHHHHHHTCCTTCTTBSTTCCHHHHCCCHHHH
T ss_pred             cCHHHHhhccHHHHHhHhhccCcCccccchheec-------cccchhHHHHHHHhhccCchhhcCCCCCcccccCCcccc
Confidence            3455566788999999999999999999999955       4444444422  2  12  45789999999999999999


Q ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         289 GNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       289 G~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      |.+.++.++++|++                           .   +.++++++...-||...+++||+.
T Consensus        87 Gari~~tl~~~L~~---------------------------~---~~~~G~as~C~gGG~g~A~~iE~i  125 (125)
T d1ulqa2          87 GARILTTLVHEMRR---------------------------R---KVQFGLATMCIGVGQGIAVVVEGM  125 (125)
T ss_dssp             HHHHHHHHHHHHHH---------------------------T---TCSEEEEEEEETTTEEEEEEEEEC
T ss_pred             chhHHHHHHHHHHh---------------------------c---CCCEEEEEecccccceeEEEEEeC
Confidence            99999999999982                           1   258999998888999999999984

>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=99.34  E-value=2.3e-13  Score=105.99  Aligned_cols=106  Identities=21%  Similarity=0.272  Sum_probs=84.9

Q ss_pred             CCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhh--cC-----CCCceecccccccchHHHh
Q psy5293         215 TSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSL--FP-----AQRLMVSSTKGAHGHLLGA  287 (359)
Q Consensus       215 ~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~--~~-----~~~~~v~~~k~~~Gh~~~A  287 (359)
                      ..|..++.++..+++++|++++++.+|||++|.|       |++..+++...  +.     ..++++++....+|||+||
T Consensus        16 ~dP~~mg~~p~~A~~klL~ragl~~~did~~Ein-------EAFA~q~l~~~~~~~~~~~~~ekvN~~GGaiAlGHP~GA   88 (128)
T d1wdkc2          16 VDPAIMGYGPVPATQKALKRAGLNMADIDFIELN-------EAFAAQALPVLKDLKVLDKMNEKVNLHGGAIALGHPFGC   88 (128)
T ss_dssp             CCGGGGGGTHHHHHHHHHHHHTCCGGGCCEEEEC-------CSBHHHHHHHHHHTTCGGGHHHHBSTTCCHHHHCCCHHH
T ss_pred             cCHHHhccCcHHHHHHHhhhcCccccccceEEee-------cccchhhhhhhhhcccccCCcceecCCCCcccccccccc
Confidence            3455666788999999999999999999999955       44444444322  11     2468888888899999999


Q ss_pred             HHHHHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         288 AGNLESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       288 sG~~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      ||.+.++.++++|++                              .+.++++++...-||...+++||+.
T Consensus        89 SGaRlv~~l~~~L~~------------------------------~~~~~Glas~C~gGG~g~A~~iErv  128 (128)
T d1wdkc2          89 SGARISGTLLNVMKQ------------------------------NGGTFGLSTMCIGLGQGIATVFERV  128 (128)
T ss_dssp             HHHHHHHHHHHHHHH------------------------------TTCSEEEEEEEETTTEEEEEEEECC
T ss_pred             cchhHHHHHHHHHHh------------------------------cCCCEEEEEecccccceeEEEEEeC
Confidence            999999999999982                              1258999998888999999999974

>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=4.1e-13  Score=104.02  Aligned_cols=103  Identities=17%  Similarity=0.191  Sum_probs=82.5

Q ss_pred             CCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHH--hhcC--CCCceecccccccchHHHhHHH
Q psy5293         215 TSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG--SLFP--AQRLMVSSTKGAHGHLLGAAGN  290 (359)
Q Consensus       215 ~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~--~~~~--~~~~~v~~~k~~~Gh~~~AsG~  290 (359)
                      ..|..++.++..+++++|++++++.+|||++|.|..+.       .+.+.  +.++  ..++++++....+|||+||||.
T Consensus        17 ~~P~~m~~gPv~Ai~klL~r~gl~~~Did~~EinEAFA-------~q~l~~~~~l~id~~kvN~~GGaiAlGHP~GaSGa   89 (124)
T d1afwa2          17 VPPEIMGVGPAYAIPKVLEATGLQVQDIDIFEINEAFA-------AQALYCIHKLGIDLNKVNPRGGAIALGHPLGCTGA   89 (124)
T ss_dssp             CCGGGGGGHHHHHHHHHHHHHTCCGGGCSEEEECCSBH-------HHHHHHHHHHTCCGGGBSTTCCHHHHCBCTTTHHH
T ss_pred             cCHHHhhhChHHHHHHHHHHcCCCcccCcEEEeccchh-------HHHHHHHHHcCCChhhccccCccceecCCcCCchH
Confidence            34666778999999999999999999999999665543       33332  2233  4578888888899999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEee
Q psy5293         291 LESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAE  356 (359)
Q Consensus       291 ~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~  356 (359)
                      +.++.++++|+                       +         .++++++...-||...++|+||
T Consensus        90 rlv~~l~~~L~-----------------------~---------~~~glas~C~ggG~G~a~~ier  123 (124)
T d1afwa2          90 RQVATILRELK-----------------------K---------DQIGVVSMCIGTGMGAAAIFIK  123 (124)
T ss_dssp             HHHHHHHHHSC-----------------------T---------TCEEEEEEEETTTEEEEEEEEE
T ss_pred             HHHHHHHHHhc-----------------------c---------CCEEEEEEcccCCcEEEEEEEe
Confidence            99999999997                       1         2578888777788888999987

>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=99.32  E-value=3.8e-13  Score=104.08  Aligned_cols=106  Identities=24%  Similarity=0.327  Sum_probs=85.8

Q ss_pred             CCCCcChHHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHH--hhcC--CCCceecccccccchHHHhHHH
Q psy5293         215 TSPREDGRGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIG--SLFP--AQRLMVSSTKGAHGHLLGAAGN  290 (359)
Q Consensus       215 ~~p~~~~~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~--~~~~--~~~~~v~~~k~~~Gh~~~AsG~  290 (359)
                      ..|..++.+++.+++++|++++++.+|||++|.|-       ++..+.+.  +.++  ..++++++....+|||+||||.
T Consensus        15 ~dP~~mg~~Pv~A~~~lL~r~gl~~~Did~~EinE-------AFA~q~la~~~~l~id~~kvN~~GGaiAlGHP~GaSGa   87 (124)
T d1m3ka2          15 VDPKVMGTGPIPASRKALERAGWKIGDLDLVEANE-------AFAAQACAVNKDLGWDPSIVNVNGGAIAIGHPIGASGA   87 (124)
T ss_dssp             CCGGGGGGTHHHHHHHHHHHHTCCGGGCSEEEECC-------SBHHHHHHHHHHHCCCGGGBSTTCCHHHHCCCTTTHHH
T ss_pred             cChHHhccchHHHHHHHHHHcCCChhcccHHHhcc-------cchhheeeehHhhCCChhhcCCCCCccccccCcCccch
Confidence            34566667889999999999999999999999554       44444442  2333  4578899999999999999999


Q ss_pred             HHHHHHHHHHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeec
Q psy5293         291 LESAFTILAVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEY  357 (359)
Q Consensus       291 ~~~~~~~~~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~  357 (359)
                      +.++.++++|++                              .+.++++++...-||...+++||+.
T Consensus        88 rl~~tl~~~L~~------------------------------~~~~~Glas~C~gGG~g~A~liE~v  124 (124)
T d1m3ka2          88 RILNTLLFEMKR------------------------------RGARKGLATLCIGGGMGVAMCIESL  124 (124)
T ss_dssp             HHHHHHHHHHHH------------------------------HTCSEEEEEEEETTTEEEEEEEECC
T ss_pred             hHHHHHHHHHHh------------------------------cCCCEEEEEecccccceeEEEEEeC
Confidence            999999999982                              1258899998888999999999974

>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Polyketide synthase PKS18
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=98.78  E-value=1.3e-08  Score=94.41  Aligned_cols=86  Identities=19%  Similarity=0.209  Sum_probs=61.0

Q ss_pred             CCChHHHHHHHHHcCCCccc--eecc-ccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQT--LCVY-CLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFN   94 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp~--~~v~-~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~   94 (359)
                      +|++  +.+|+..||++...  +.++ .+| +++.||..|..+|++|..+.+||+++|.+....           ..   
T Consensus       127 ~P~~--a~~v~~~LGl~~~~~~~~~~~~gC~g~~~aL~~A~~~l~sg~~~~~LVV~~E~~s~~~-----------~~---  190 (372)
T d1teda_         127 APGV--DVAIVKELGLSPSISRVVVNFMGCAAAMNALGTATNYVRAHPAMKALVVCIELCSVNA-----------VF---  190 (372)
T ss_dssp             SSCH--HHHHHHHHTCCTTCEEEEEESCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEECGGGC-----------CC---
T ss_pred             CchH--HHHHHhhhccCCceeEeeccccCccHHHHHHHHHHHHHhcCCCccceeeeehhhcccc-----------cC---
Confidence            4655  89999999997633  4444 589 999999999999999999999999999622110           00   


Q ss_pred             CCCCCCCCCccCCCCCceecceeeEEeecchH
Q psy5293          95 NEPAQASRPFDKRRDGFVMGEGSAILVLEELD  126 (359)
Q Consensus        95 ~~~~~~~~~fd~~~~G~~~geGa~a~~l~~~~  126 (359)
                        .    ..++......++|||++|+++++..
T Consensus       191 --~----d~~~~~~~~~lfGDGAaA~ll~~~~  216 (372)
T d1teda_         191 --A----DDINDVVIHSLFGDGCAALVIGASQ  216 (372)
T ss_dssp             --C----SSHHHHHHHHHBCEEEEEEEEEEEC
T ss_pred             --C----CcchhhhhhhhhcccceeEEeccCC
Confidence              0    0011112345689999999997643

>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Biosynthetic thiolase
species: Zoogloea ramigera [TaxId: 350]

Probab=98.35  E-value=2e-07  Score=82.17  Aligned_cols=54  Identities=22%  Similarity=0.290  Sum_probs=49.3

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCH
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQ   77 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~   77 (359)
                      ++.+++...|+.  -|+++|+++| ||++||.+|+++|++|++|++|+||+|+|...
T Consensus        66 ~ar~~al~aglp~~vpa~tv~~~C~Sg~~Ai~~Aa~~I~~G~~dvvlagG~EsmS~~  122 (268)
T d1m3ka1          66 PARQAAMKAGVPQEATAWGMNQLAGSGLRAVALGMQQIATGDASIIVAGGMESMSMA  122 (268)
T ss_dssp             HHHHHHHHTTCCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSCEEEEEEEESTTC
T ss_pred             HHhHHHHHhCCcccccceeecccCcccchHHHHHHHHHhCCCceEEeeccccccccC
Confidence            588999999985  4999999999 99999999999999999999999999996543

>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase)
species: Pseudomonas fragi [TaxId: 296]

Probab=98.35  E-value=1.6e-07  Score=82.43  Aligned_cols=54  Identities=24%  Similarity=0.217  Sum_probs=48.6

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCH
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQ   77 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~   77 (359)
                      ++.+++...|+.  -|.++|+++| ||++||..|++.|++|++|++|+||+|+|...
T Consensus        71 ~aR~~al~ag~p~~vp~~tV~~~C~Sgl~Ai~~aa~~I~sG~~dvvlAgGvEsmS~~  127 (262)
T d1wdkc1          71 IARMASLMTQIPHTSAAQTVSRLCGSSMSALHTAAQAIMTGNGDVFVVGGVEHMGHV  127 (262)
T ss_dssp             HHHHHHTTSSSCTTSEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEETTTS
T ss_pred             chhhhHhhhhcccccchhhccccccHHHHHHHHHHHHHHhhcCCceeeecccccccc
Confidence            588888887774  4999999999 99999999999999999999999999997653

>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoadipyl CoA thiolase
species: Thermus thermophilus [TaxId: 274]

Probab=98.33  E-value=2.5e-07  Score=81.83  Aligned_cols=54  Identities=28%  Similarity=0.240  Sum_probs=49.5

Q ss_pred             HHHHHHHHcCCC--ccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCH
Q psy5293          24 PAGAISIDMDSK--VQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQ   77 (359)
Q Consensus        24 ~a~~ia~~~g~~--gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~   77 (359)
                      ++.+++...|+.  .|.++|+++| ||++||.+|++.|++|..|++|+||+|+|+..
T Consensus        64 ~aR~~al~aGlp~~vp~~tVn~~CaSg~~Ai~~a~~~I~~G~~d~~lagG~EsmS~~  120 (273)
T d1ulqa1          64 VARMALLLAGFPVEVAGCTVNRLCGSGLEAVAQAARAIWAGEGKVYIGSGVESMSRA  120 (273)
T ss_dssp             HHHHHHHHTTCCTTCEEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEESSSC
T ss_pred             HHHHHHHHcCCCCccceEEEecccchHHHHHHHHHHHHhcCCCccceeeeccccchh
Confidence            588899998984  4999999999 99999999999999999999999999996654

>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Thiolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.29  E-value=3.1e-07  Score=80.90  Aligned_cols=53  Identities=21%  Similarity=0.207  Sum_probs=48.3

Q ss_pred             HHHHHHHHcCC--Cccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCC
Q psy5293          24 PAGAISIDMDS--KVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCIS   76 (359)
Q Consensus        24 ~a~~ia~~~g~--~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~   76 (359)
                      ++.+++...|+  ..|.++|+++| ||++||..|++.|++|+.|++|+||+|+|+.
T Consensus        78 ~aR~~al~aglp~~vpa~tVnr~CaSg~~Ai~~Aa~~I~~G~~divlagG~EsmS~  133 (269)
T d1afwa1          78 EHRAACLASGIPYSTPFVALNRQCSSGLTAVNDIANKIKVGQIDIGLALGVESMTN  133 (269)
T ss_dssp             HHHHHHHHTTCCTTSCEEEEECGGGHHHHHHHHHHHHHHTTSCSEEEEEEEEEHHH
T ss_pred             cchhhhhhccccccccchhccccchHHHHHHHHHHHHHhhccccceeeeecccccc
Confidence            67888888887  35999999999 9999999999999999999999999998653

>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=98.25  E-value=5.5e-07  Score=74.10  Aligned_cols=82  Identities=18%  Similarity=0.184  Sum_probs=65.3

Q ss_pred             cCCChHHHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCC
Q psy5293          18 FFPNMVPAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNN   95 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~   95 (359)
                      .+|++  +.+|...||++. +++.|+.+| +++.||..|..+|++|.++.+|++++|..+ ..          +.     
T Consensus        86 ~~P~~--a~~v~~~Lgl~~~~~~di~~~C~g~~~al~~A~~~i~sg~~~~~Lvv~~e~~S-~~----------~~-----  147 (174)
T d1hnja1          86 AFPSA--ACQIQSMLGIKGCPAFDVAAACAGFTYALSVADQYVKSGAVKYALVVGSDVLA-RT----------CD-----  147 (174)
T ss_dssp             SSSCH--HHHHHHHHTCCSSCEEEECCGGGHHHHHHHHHHHHHHTTSCSEEEEEEEECHH-HH----------SC-----
T ss_pred             cccch--hhhhhhccCCCchhhhhhhhhhccHHHHHHHHHHHHhcCCcceeEEEeeehhh-cc----------cC-----
Confidence            35666  999999999986 899999999 999999999999999999999999999621 11          11     


Q ss_pred             CCCCCCCCccCCCCCceecceeeEEeecch
Q psy5293          96 EPAQASRPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus        96 ~~~~~~~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                              +.+....+++|||+++++|++.
T Consensus       148 --------~~d~~~~~lfGDgA~A~vl~~~  169 (174)
T d1hnja1         148 --------PTDRGTIIIFGDGAGAAVLAAS  169 (174)
T ss_dssp             --------TTCHHHHTTBCCEEEEEEEEEE
T ss_pred             --------CCCCCeEEEeceeeEEEEEEeC
Confidence                    1122234568999999999864

>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=98.13  E-value=1.4e-06  Score=71.50  Aligned_cols=83  Identities=20%  Similarity=0.334  Sum_probs=66.0

Q ss_pred             cCCChHHHHHHHHHcCCCccceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCC
Q psy5293          18 FFPNMVPAGAISIDMDSKVQTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNE   96 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~gp~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~   96 (359)
                      .+|..  +.+|+..||.+.+.+.|+.+| +++.+|..|..+|++|.++.+|++++|.+...           +       
T Consensus        84 ~~p~~--a~~v~~~Lg~~~~~~di~~~C~g~~~al~~a~~~~~~~~~~~~Lvv~~e~~S~~-----------~-------  143 (172)
T d1ub7a1          84 LFPDT--AALVQARFGLKAFAYDLLAGCPGWIYALAQAHALVEAGLAQKVLAVGAEALSKI-----------I-------  143 (172)
T ss_dssp             EESCH--HHHHHHHTTCCCEEEEEECSTTHHHHHHHHHHHHHHTTSCSEEEEEEEECGGGT-----------S-------
T ss_pred             cccch--HHHHHHHhccCccceeehhccccHHHHHHHHhhhhhcCCcceeEEecccccccc-----------c-------
Confidence            34555  889999999999999999999 99999999999999999999999999972211           0       


Q ss_pred             CCCCCCCccCCCCCceecceeeEEeecchH
Q psy5293          97 PAQASRPFDKRRDGFVMGEGSAILVLEELD  126 (359)
Q Consensus        97 ~~~~~~~fd~~~~G~~~geGa~a~~l~~~~  126 (359)
                            .+++....+++|||++++++++.+
T Consensus       144 ------~~~d~~~~~lfGDgAaA~ll~~~~  167 (172)
T d1ub7a1         144 ------DWNDRATAVLFGDGGGAAVVGKVR  167 (172)
T ss_dssp             ------CTTCHHHHTTBCCEEEEEEEECCC
T ss_pred             ------CCCCcCeEEEecceeEEEEEEEcC
Confidence                  112223456789999999997643

>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=98.12  E-value=2.2e-06  Score=70.79  Aligned_cols=78  Identities=18%  Similarity=0.255  Sum_probs=63.3

Q ss_pred             HHHHHHHHcCCCc-cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCCC
Q psy5293          24 PAGAISIDMDSKV-QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQAS  101 (359)
Q Consensus        24 ~a~~ia~~~g~~g-p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  101 (359)
                      .+..+...++.+. +++.++.+| +++.||..|..+|++|.++.+||+++|.+. ..          +            
T Consensus        97 ~a~~v~~~l~~~~~~~~Dv~~~C~g~~~aL~~A~~~i~~~~~~~~LvV~~e~~s-~~----------~------------  153 (181)
T d1mzja1          97 LSVAIAHELGADNAGGFDLSAACAGFCHALSIAADAVESGGSRHVLVVATERMT-DV----------I------------  153 (181)
T ss_dssp             HHHHHHHHHTCTTCEEEEEECGGGHHHHHHHHHHHHHHHSSCSCEEEEEEEEGG-GG----------S------------
T ss_pred             HHHHHHHhhcCCCccceeHHhhhccHHHHHHHHhCHhhcCCCceeEEeeecccc-cc----------C------------
Confidence            3888999999864 899999999 999999999999999999999999999621 10          1            


Q ss_pred             CCccCCCCCceecceeeEEeecch
Q psy5293         102 RPFDKRRDGFVMGEGSAILVLEEL  125 (359)
Q Consensus       102 ~~fd~~~~G~~~geGa~a~~l~~~  125 (359)
                       .+++....+++|||++++++++.
T Consensus       154 -~~~d~~~~~lfGDGAaA~ll~~~  176 (181)
T d1mzja1         154 -DLADRSLSFLFGDGAGAAVVGPS  176 (181)
T ss_dssp             -CSSCTTTTTTBCEEEEEEEEEEE
T ss_pred             -CCCCcceEEEeeeeeEEEEEEeC
Confidence             12333456789999999999753

>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: 3-hydroxy-3-methylglutaryl CoA synthase MvaS
species: Staphylococcus aureus [TaxId: 1280]

Probab=97.78  E-value=2.8e-05  Score=62.90  Aligned_cols=74  Identities=14%  Similarity=0.087  Sum_probs=59.7

Q ss_pred             HHHHHHHHcCCCc--cceeccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCCCCCHHHHHHHHhhccccccCCCCCCCC
Q psy5293          24 PAGAISIDMDSKV--QTLCVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAESCISQLSIAAFCRVRALATQFNNEPAQA  100 (359)
Q Consensus        24 ~a~~ia~~~g~~g--p~~~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~~~~~~~~~~~~~~~~l~~~~~~~~~~~  100 (359)
                      .+..+...+|++.  .++.++.+| +++.||..|.++|++|..+.+||++.|.....                   +   
T Consensus        87 ~a~~v~~~lg~~~~~~~~dv~~~C~g~~~al~~A~~~i~~~~~~~alvV~sd~~~~~-------------------~---  144 (166)
T d1xpma1          87 AAVQIHNLLGIQPFARCFEMKEACYAATPAIQLAKDYLATRPNEKVLVIATDTARYG-------------------L---  144 (166)
T ss_dssp             HHHHHHHHTTCCSSCEEEEEESTTTTHHHHHHHHHHHHTTCTTCEEEEEEEEEECCC-------------------T---
T ss_pred             hHHHHHHhhccccceEEeeecccHHHHHHHHHHHhhHHhcCCCCeEEEEEEceEecc-------------------C---
Confidence            4889999999964  789999999 99999999999999999999999999951110                   0   


Q ss_pred             CCCccCCCCCceecceeeEEeecc
Q psy5293         101 SRPFDKRRDGFVMGEGSAILVLEE  124 (359)
Q Consensus       101 ~~~fd~~~~G~~~geGa~a~~l~~  124 (359)
                          + ...-+.+|+|++++++++
T Consensus       145 ----~-~~~~~~fGDGA~A~ll~~  163 (166)
T d1xpma1         145 ----N-SGGEPTQGAGAVAMVIAH  163 (166)
T ss_dssp             ----T-CSSGGGCEEEEEEEEEEE
T ss_pred             ----C-CCCCccCCCeeEEEEEec
Confidence                0 112256899999999875

>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.68  E-value=1.1e-05  Score=67.50  Aligned_cols=54  Identities=19%  Similarity=0.226  Sum_probs=46.8

Q ss_pred             cCCChHHHHHHHHHcCCCc--cceec-cccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCC
Q psy5293          18 FFPNMVPAGAISIDMDSKV--QTLCV-YCLC-YGGHAIGDAFRLIQGGHADVMIAGAAES   73 (359)
Q Consensus        18 ~~~~~~~a~~ia~~~g~~g--p~~~v-~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~   73 (359)
                      .+|+.  +.++...+|+..  +.+.+ +.+| +++.+|..|.++|++|..+.+||+++|.
T Consensus       109 ~~P~~--aa~v~~~lg~~~~~~~~~i~~~gC~g~~~al~~A~~~l~~~~~~~vLvv~~e~  166 (200)
T d1u0ma1         109 MMPSL--TAWLINEMGFDSTTRQIPIAQLGCAAGGAAINRAHDFCTAYPEANALIVACEF  166 (200)
T ss_dssp             CSSCH--HHHHHHHTTCCTTCEEEEECSCGGGHHHHHHHHHHHHHHHSTTCEEEEEEEEE
T ss_pred             Ccchh--HHHHHHHHhcCCCeeEeccccchhhHHHHHHHHHHHHHHhCCCCEEEEEEEec
Confidence            35665  889999999976  55565 5799 9999999999999999999999999996

>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=97.14  E-value=0.00022  Score=60.84  Aligned_cols=53  Identities=13%  Similarity=0.132  Sum_probs=41.2

Q ss_pred             CCChHHHHHHHHHcCCCcc--ce-eccccc-HHHHHHHHHHHHHHcCCCCEEEEeeeCC
Q psy5293          19 FPNMVPAGAISIDMDSKVQ--TL-CVYCLC-YGGHAIGDAFRLIQGGHADVMIAGAAES   73 (359)
Q Consensus        19 ~~~~~~a~~ia~~~g~~gp--~~-~v~~ac-sgl~Al~~A~~~I~~G~~d~~lvgg~e~   73 (359)
                      +|..  ...+...+++...  .+ .++.+| +++.+|..|.++|++|..+.+||+++|.
T Consensus       137 ~p~~--~a~~~~~l~~~~~~~~~~~~~~~C~g~~~al~~A~~~i~~~~~~~vLvV~~E~  193 (235)
T d1bi5a1         137 MPGA--DYQLTKLLGLRPYVKRYMMYQQGCFAGGTVLRLAKDLAENNKGARVLVVCSEV  193 (235)
T ss_dssp             SSCH--HHHHHHHHTCCTTCEEEEEESCCTTHHHHHHHHHHHHHHTSTTCEEEEEEEEC
T ss_pred             cCcc--HHHHHHHHhcCCCceEEeeecCccchHHHHHHHHHHHHHcCCCCeEEEEEeee
Confidence            4454  4455566666443  33 347789 9999999999999999999999999996

>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.13  E-value=7.1e-05  Score=62.54  Aligned_cols=72  Identities=21%  Similarity=0.252  Sum_probs=58.9

Q ss_pred             EEEEeecccccchhhhhhhh-hhcccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         136 YAEIIGYGMIDLSDVLSSNN-ALQGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       136 ~~~i~g~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      .+.+.|.+....+...+... ..++.++.+.|+....+++++.+.+++..+|++||++++.++|+|+..+|+.
T Consensus        97 ~g~~~g~~~g~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~tv~tACaS~l~Ai~~  169 (208)
T d1tqyb1          97 MGVVTANACGGFDFTHREFRKLWSEGPKSVSVYESFAWFYAVNTGQISIRHGMRGPSSALVAEQAGGLDALGH  169 (208)
T ss_dssp             EEEEEECSSCSHHHHHHHHHHHHHTCGGGSCTTHHHHSSTTHHHHHHHHHHTCCSSCEEEECGGGHHHHHHHH
T ss_pred             cccccccccccccccchhhhhhccccccccccccccccccccccchhhhcccccceeeeccccccHHHHHHHH
Confidence            36778877666655554333 3366777899999999999999999999999999999999999999877665

>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Thermus thermophilus [TaxId: 274]

Probab=96.54  E-value=0.0064  Score=47.51  Aligned_cols=96  Identities=24%  Similarity=0.190  Sum_probs=61.5

Q ss_pred             HHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHH
Q psy5293         223 GALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAV  300 (359)
Q Consensus       223 ~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l  300 (359)
                      ...++++++|++++++++|||++..|-.+     ..-.+.+.+.++  ..+.+ ... ..+||+.+||=...+   .+.+
T Consensus        48 ~vp~~i~~~L~~~g~~~~dId~~i~Hqa~-----~~~~~~i~~~lgi~~~k~~-~~~-~~~Gn~~sasip~~L---~~~~  117 (149)
T d1ub7a2          48 VMNTATLEAIEKAGLTPEDIRLFVPHQAN-----LRIIDAARERLGLPWERVA-VNV-DRYGNTSTASIPLAL---KEAV  117 (149)
T ss_dssp             HHHHHHHHHHHHHTCCGGGCSEEEECCSC-----HHHHHHHHHTTTCCGGGBC-CCH-HHHCBCGGGHHHHHH---HHHH
T ss_pred             HHHHHHHHHHHhhccccccccEEEeeccc-----hHHHHHHHhhccchhhHHH-HHH-HHhcCCcchhHHHHH---HHHH
Confidence            34578899999999999999988888443     444455555554  22222 222 345999988744333   3444


Q ss_pred             hcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEe
Q psy5293         301 HEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       301 ~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~  355 (359)
                      +++.+.                        +   ....++.++|.|-+-++++++
T Consensus       118 ~~~~~~------------------------~---Gd~vll~g~G~G~s~ga~llr  145 (149)
T d1ub7a2         118 DAGRIR------------------------E---GDHVLLVSFGAGLTWAAAVLT  145 (149)
T ss_dssp             HHTSSC------------------------T---TCEEEEEEEETTTEEEEEEEE
T ss_pred             HcCCCC------------------------C---CCEEEEEEEchHhhhEEEEEE
Confidence            433221                        1   467888899987777777765

>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Escherichia coli [TaxId: 562]

Probab=96.47  E-value=0.00035  Score=59.95  Aligned_cols=71  Identities=35%  Similarity=0.626  Sum_probs=56.4

Q ss_pred             EEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +++.|................ .+.+..+.|...+..+++..+..++..+|++||++++.++|+||..+|++
T Consensus       100 gv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~gl~Gp~~tv~~aCaSg~~Ai~~  171 (250)
T d2gfva1         100 GAAIGSGIGGLGLIEENHTSLMNGGPRKISPFFVPSTIVNMVAGHLTIMYGLRGPSISIATAQTSGVHNIGH  171 (250)
T ss_dssp             EEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHTTCCSCEECCCCGGGHHHHHHHH
T ss_pred             EEEEeeccCCcchhhhhHHHHhhccccccccchhhhhhhhHHHHHHHHHhCCCCCccccccccchhhhhhHH
Confidence            777887655444444333322 45677789999999999999999999999999999999999999877666

>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

Probab=96.42  E-value=0.00047  Score=59.15  Aligned_cols=73  Identities=32%  Similarity=0.671  Sum_probs=59.2

Q ss_pred             cEEEEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         134 NIYAEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       134 ~i~~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      ++ +++.|.+....+......... ++....+.|+.....+.+..+..++..+|++||++++.++|+|+..+|.+
T Consensus        97 ~~-gv~~Gs~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~is~~~gl~Gp~~tv~~aCaSsl~Ai~~  170 (249)
T d1j3na1          97 RV-GTLVGTGIGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGADALGS  170 (249)
T ss_dssp             GE-EEEEECSSCCHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCBCCBCCGGGHHHHHHHH
T ss_pred             cE-EEEEEECCCcccccccccccccccCccccChhhhccccchhhhhhhHhhcCCCCCccccccccchHHHHHHH
Confidence            45 888888776665555433333 55677899999999999999999999999999999999999999766655

>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.31  E-value=0.0092  Score=46.54  Aligned_cols=98  Identities=16%  Similarity=0.099  Sum_probs=63.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHH
Q psy5293         222 RGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILA  299 (359)
Q Consensus       222 ~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~  299 (359)
                      ....++++++|++++++++|||++..|-.+     ..-.+++.+.++  ..+...+ .-..+||+.+||=...+.+   .
T Consensus        48 ~~v~~~i~~~L~~~gl~~~dId~~i~Hqa~-----~~i~~~v~~~lgl~~ek~~~~-~~~~~GNt~sasip~~L~~---a  118 (148)
T d1u6ea2          48 FKMGDVGRRAMDAAGVRPDQIDVFVPHQAN-----SRINELLVKNLQLRPDAVVAN-DIEHTGNTSAASIPLAMAE---L  118 (148)
T ss_dssp             HHHHHHHHHHHHHHTCCGGGCCEEEECCSC-----HHHHHHHHHHHTCCTTCEECC-THHHHCBCGGGHHHHHHHH---H
T ss_pred             HHHHHHHHHHHHHcCCCcccccEEEecccc-----HHHHHHHHHhcCCCchhhhhh-hHHhhCCCccchHHHHHHH---H
Confidence            344578899999999999999999999554     344555655555  2233333 2234599988875544444   4


Q ss_pred             HhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEe
Q psy5293         300 VHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       300 l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~  355 (359)
                      ++++.+.                        +   ....+..+||.|=+-+++|++
T Consensus       119 ~~~g~i~------------------------~---Gd~vll~gfG~G~s~~a~llr  147 (148)
T d1u6ea2         119 LTTGAAK------------------------P---GDLALLIGYGAGLSYAAQVVR  147 (148)
T ss_dssp             HHHTSSC------------------------T---TCEEEEEEEETTTEEEEEEEE
T ss_pred             HHcCCCC------------------------C---CCEEEEEEEchhhhheEEEEe
Confidence            4433221                        1   467778888876666677664

>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase I
species: Escherichia coli [TaxId: 562]

Probab=96.08  E-value=0.00069  Score=57.93  Aligned_cols=74  Identities=26%  Similarity=0.379  Sum_probs=57.5

Q ss_pred             CcEEEEEeecccccchhhhhhhhhh--cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         133 ANIYAEIIGYGMIDLSDVLSSNNAL--QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       133 ~~i~~~i~g~~~~~~~~~~~~~~~~--~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      .++ +++.+......+.........  ++....+.|+.++..+.++.+..++..+|++||.+++.++|+|+..+|..
T Consensus        97 ~r~-g~~~g~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~g~~Gp~~~i~taCaSsl~Ai~~  172 (253)
T d2vbaa1          97 PRV-GLIAGSGGGSPRFQVFGADAMRGPRGLKAVGPYVVTKAMASGVSACLATPFKIHGVNYSISSACATSAHCIGN  172 (253)
T ss_dssp             TTE-EEEEECSSCCHHHHHHHHHHHTSTTTHHHHCTTHHHHHSTTHHHHHHHTTTTCCSCEEEEECGGGHHHHHHHH
T ss_pred             CCE-EEEeccccccccccccccccccccCCccccCchhhhccccccccceeccccCcccceeeeeccchhHHHHHHH
Confidence            344 777877666555544333322  44566789999999999999999999999999999999999999766555

>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Synechocystis sp. [TaxId: 1143]

Probab=95.58  E-value=0.0016  Score=55.37  Aligned_cols=72  Identities=33%  Similarity=0.624  Sum_probs=57.2

Q ss_pred             EEEEeecccccchhhhhhhhhh-cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         136 YAEIIGYGMIDLSDVLSSNNAL-QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       136 ~~~i~g~~~~~~~~~~~~~~~~-~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      .+++.|.+.............. ++.+....|.....++.+..+..++..+|++||++++.++|+||..+|..
T Consensus        99 ~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~is~~~gl~Gp~~tv~~ACsS~l~Ai~~  171 (250)
T d1e5ma1          99 IGVLIGTGIGGLKVLEDQQTILLDKGPSRCSPFMIPMMIANMASGLTAINLGAKGPNNCTVTACAAGSNAIGD  171 (250)
T ss_dssp             EEEEEECSSCSHHHHHHHHHHHHHHCGGGSCTTHHHHHSTTHHHHHHHHHHTCCSCEECCCCGGGHHHHHHHH
T ss_pred             ceEEEEEeeccccchhhhhHHHhhcCccccCcccchhhhcchhhhhHHHhccCCCCCccccccchhhhhhhHH
Confidence            3777887766555555433333 55677888999999999999999999999999999999999999755554

>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Ketoacyl-ACP synthase III (FabH)
species: Escherichia coli [TaxId: 562]

Probab=95.47  E-value=0.036  Score=42.67  Aligned_cols=96  Identities=19%  Similarity=0.224  Sum_probs=60.8

Q ss_pred             HHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhHHHHHHHHHHHHH
Q psy5293         223 GALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAAGNLESAFTILAV  300 (359)
Q Consensus       223 ~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~AsG~~~~~~~~~~l  300 (359)
                      ...++++++|++++++++|||++..|-.+.     .-.+.+.+.++  ..+++.+  -..+||+.+||=...+.   +.+
T Consensus        45 ~~~~~i~~~L~~~g~~~~dId~~i~Hq~~~-----~~~~~~~~~l~l~~~k~~~~--~~~~GN~~sasip~~L~---~~~  114 (143)
T d1hnja2          45 ELAHIVDETLAANNLDRSQLDWLVPHQANL-----RIISATAKKLGMSMDNVVVT--LDRHGNTSAASVPCALD---EAV  114 (143)
T ss_dssp             HHHHHHHHHHHHTTCCGGGCCEEEECCSCH-----HHHHHHHHHTTCCGGGBCCC--HHHHCBCGGGHHHHHHH---HHH
T ss_pred             hhhHHHHHHHHHhhhcccccceEEeccCch-----HHHHHHHHhCccchhhhhhh--hhhhcccccchHHHHHH---HHH
Confidence            446788999999999999999888885543     34445555554  2233322  23569999887444433   344


Q ss_pred             hcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEe
Q psy5293         301 HEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIA  355 (359)
Q Consensus       301 ~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~  355 (359)
                      +++.+                         +  .....+..+||.|=+-++++++
T Consensus       115 ~~~~~-------------------------~--~Gd~vll~g~G~G~s~g~~llr  142 (143)
T d1hnja2         115 RDGRI-------------------------K--PGQLVLLEAFGGGFTWGSALVR  142 (143)
T ss_dssp             HTTCS-------------------------C--TTCEEEEEEEETTTEEEEEEEE
T ss_pred             HhCCC-------------------------C--CCCEEEEEEEehhhhhEEEEEE
Confidence            43221                         1  1467788888877666666664

>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]

Probab=94.98  E-value=0.0022  Score=54.97  Aligned_cols=50  Identities=54%  Similarity=1.007  Sum_probs=44.9

Q ss_pred             cccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         158 QGSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       158 ~~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      ........|+.++.++.++.+.+++..+|++||++++.++|+|+..+|.+
T Consensus       139 ~~~~~~~~~~~~~~~~~~~~a~~is~~~~l~Gp~~~v~~aCaSsl~Ai~~  188 (270)
T d2ix4a1         139 EKRLRRLSPFFIPKILVNMASGHVSMKYGFQGPNHAAVTACATGAHSIGD  188 (270)
T ss_dssp             TTCGGGCCTTHHHHHCTTHHHHHHHHHHTCCSCEECBCCGGGHHHHHHHH
T ss_pred             hccccccCcccCcccccchhHHHHHHHhCCCCCCcccccccchhhHHHHH
Confidence            55667789999999999999999999999999999999999999766555

>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=94.75  E-value=0.0026  Score=52.84  Aligned_cols=71  Identities=20%  Similarity=0.322  Sum_probs=51.5

Q ss_pred             EEEeecccccchhhhhhhhhh-c------ccccccCcchhhcccCCcchhhhHHHhccCCCCcccccccccCcccccc
Q psy5293         137 AEIIGYGMIDLSDVLSSNNAL-Q------GSYNKLSPYFVTRILPNMSAGQISIEHGFQGPNHCVSTACATGAHAIGM  207 (359)
Q Consensus       137 ~~i~g~~~~~~~~~~~~~~~~-~------~~~~~~~p~~~~~~~~~~~a~~ia~~~g~~gp~~~~~~acAsg~~aig~  207 (359)
                      +.+.+..........+..... +      .....+.++..+..++++.+.++++.+|++||++++.++|+|+..+|.+
T Consensus        99 ~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~ia~~~g~~Gp~~tv~~ACaS~~~Ai~~  176 (216)
T d1tqya1          99 GVSLGSAVAAATSLEREYLLLSDSGRDWEVDAAWLSRHMFDYLVPSVMPAEVAWAVGAEGPVTMVSTGCTSGLDSVGN  176 (216)
T ss_dssp             EEEEECSSTTHHHHHHHHHHHHTTTTCSSCCGGGCCTTTHHHHSTTHHHHHHHHHHTCCSCEEEECCGGGHHHHHHHH
T ss_pred             cccccccccccchhhHHHhhhhhcccccccchhhcccccccccCchHHHHHHHHhcCccccceeeccccchHHHHHHH
Confidence            556665555444433322222 1      1234567788888999999999999999999999999999999877766

>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Putative polyketide synthase SCO1206
species: Streptomyces coelicolor [TaxId: 1902]

Probab=93.59  E-value=0.072  Score=41.15  Aligned_cols=62  Identities=15%  Similarity=0.177  Sum_probs=41.0

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceec-ccccccchHHHhH
Q psy5293         222 RGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVS-STKGAHGHLLGAA  288 (359)
Q Consensus       222 ~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~-~~k~~~Gh~~~As  288 (359)
                      ....+++++++++++++++|||++..|-.+     ..-++.+.+.++  ..+++.. ..-..+||..+||
T Consensus        43 ~~~~~~i~~~l~~~g~~~~did~~~~Hq~~-----~~i~~~i~~~Lgl~~~k~~~s~~~l~~~GN~~sas  107 (148)
T d1u0ma2          43 EPLAPALKELAGEHGWDASDLDFYIVHAGG-----PRILDDLSTFLEVDPHAFRFSRATLTEYGNIASAV  107 (148)
T ss_dssp             HHHHHHHHHHHHTTSCCSSCCSCCEEECSH-----HHHHHHHHHHSCSCGGGGHHHHHHHHHTCBCTTHH
T ss_pred             HHHHHHHHHHHHHhCCCHHHCCEEEECCCC-----HHHHHHHHHHhCCChhhhhHHHHHHHhcCCCCcch
Confidence            456788999999999999999988888443     444555666655  1222211 0113349998887

>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway
species: Streptomyces sp. r1128 [TaxId: 140437]

Probab=93.37  E-value=0.21  Score=38.54  Aligned_cols=61  Identities=20%  Similarity=0.203  Sum_probs=40.3

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecccccccchHHHhH
Q psy5293         222 RGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSSTKGAHGHLLGAA  288 (359)
Q Consensus       222 ~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~~k~~~Gh~~~As  288 (359)
                      ....++++++|++++++++|||++..|-.+     ..-++.+.+.++  ..++ +...-..+|++.+||
T Consensus        48 ~~vp~~i~~~L~~~gl~~~dId~~i~Hq~~-----~~~~~~v~~~lgi~~ek~-~~~~~~~~GNt~Sas  110 (153)
T d1mzja2          48 ADVVPAAREALEVAGLTVGDLVAFVPHQAN-----LRIIDVLVDRLGVPEHVV-VSRDAEDTGNTSSAS  110 (153)
T ss_dssp             HHHHHHHHHHHHTTTCCGGGCSEEEECCSC-----HHHHHHHHHHHTCCTTSE-ECCTHHHHCBCTTHH
T ss_pred             HHHHHHHHHHHHHhCCCcccCCEEEEcCCc-----HHHHHHHHHHhCCCchhc-chhhhhhcCCcccch
Confidence            455678889999999999999998888554     344455555554  2232 222223458888775

>d1ee0a2 c.95.1.2 (A:236-395) Pyrone synthase (PyS, chalcone synthase 2) {Gerbera hybrid cultivar [TaxId: 18101]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Pyrone synthase (PyS, chalcone synthase 2)
species: Gerbera hybrid cultivar [TaxId: 18101]

Probab=93.07  E-value=0.25  Score=38.50  Aligned_cols=109  Identities=14%  Similarity=0.084  Sum_probs=69.4

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceec-ccccccchHHHhHHHHHHHHHHH
Q psy5293         222 RGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVS-STKGAHGHLLGAAGNLESAFTIL  298 (359)
Q Consensus       222 ~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~-~~k~~~Gh~~~AsG~~~~~~~~~  298 (359)
                      ....+.+.+.+++++++.+||+++..|--+     ..-++++.+.++  ..++..+ ..-...|.+-+||=..-+-++..
T Consensus        47 ~~v~~~v~~~l~~~gl~~~di~~~v~Hqgg-----~~Ild~i~~~L~L~~~~l~~s~~vl~~yGNtSSaSI~~vL~~~~~  121 (160)
T d1ee0a2          47 KNIENAAEKALSPLGITDWNSVFWMVHPGG-----RAILDQVERKLNLKEDKLRASRHVLSEYGNLISACVLFIIDEVRK  121 (160)
T ss_dssp             HHHHHHHHHHHGGGTCCCGGGSEEEECCSS-----HHHHHHHHHHTTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHhhccCCccccceEeecCCc-----HHHHHHHHHHcCCCHHHHHHHHHHHHHhCCCccchHHHHHHHHHh
Confidence            566788899999999999999999999444     445566666655  3333321 11223488888874444444433


Q ss_pred             HHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         299 AVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       299 ~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .-.   .                    +.+....++...++..+||.|=+-..++|++.+
T Consensus       122 ~~~---~--------------------~~~~~~g~~~d~~ll~afG~Glt~~~~llr~~~  158 (160)
T d1ee0a2         122 RSM---A--------------------EGKSTTGEGLDCGVLFGFGPGMTVETVVLRSVR  158 (160)
T ss_dssp             HHH---H--------------------TTCSBTBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred             hhh---h--------------------cCCCCcCCCcCEEEEEEEChHHHHHHHHHeecc
Confidence            221   1                    011111122468899999998888999998864

>d1bi5a2 c.95.1.2 (A:236-389) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Chalcone synthase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=92.18  E-value=0.3  Score=37.68  Aligned_cols=109  Identities=12%  Similarity=0.047  Sum_probs=67.8

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceec-ccccccchHHHhHHHHHHHHHHH
Q psy5293         222 RGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVS-STKGAHGHLLGAAGNLESAFTIL  298 (359)
Q Consensus       222 ~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~-~~k~~~Gh~~~AsG~~~~~~~~~  298 (359)
                      ......+.+.+++++++.+||+++..|--+     ..-++++.+.++  ..+++.+ ..-...|.+-+||=..-+-++..
T Consensus        42 ~~i~~~~~~~l~~~gl~~~di~~~v~Hqgg-----~~Ild~v~~~L~L~~~~~~~s~~vl~~yGN~SSasi~~vL~~~~~  116 (154)
T d1bi5a2          42 KNITKALVEAFEPLGISDYNSIFWIAHPGG-----PAILDQVEQKLALKPEKMNATREVLSEYGNMSSACVLFILDEMRK  116 (154)
T ss_dssp             HHHHHHHHHHHGGGTCCCTTSSEEEECCSS-----HHHHHHHHHHHTCCGGGGHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCCccccceEeecccc-----HHHHHHHHHHhCCCHHHHHHhHHHHHhcCCCCcccHHHHHHHHHH
Confidence            566678899999999999999999989544     445556666655  2233322 11223488888874444433333


Q ss_pred             HHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         299 AVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       299 ~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .-.   ..                    ......++...++..+||.|=+...++|++.+
T Consensus       117 ~~~---~~--------------------~~~~~g~~~~~~~~~aFG~Glt~~~~llr~~~  153 (154)
T d1bi5a2         117 KST---QN--------------------GLKTTGEGLEWGVLFGFGPGLTIETVVLRSVA  153 (154)
T ss_dssp             HHH---HT--------------------TCSBTTTTCSEEEEEEEETTTEEEEEEEEECB
T ss_pred             hhh---cc--------------------CCcccCCCcCEEEEEEEchHHhHHHHHHhcCc
Confidence            322   10                    00111122468899999998888889998753

>d1u0ua2 c.95.1.2 (A:238-393) Dihydropinosylvin synthase {Scots pine (Pinus sylvestris) [TaxId: 3349]}

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Chalcone synthase-like
domain: Dihydropinosylvin synthase
species: Scots pine (Pinus sylvestris) [TaxId: 3349]

Probab=90.13  E-value=0.74  Score=35.42  Aligned_cols=109  Identities=14%  Similarity=0.095  Sum_probs=67.2

Q ss_pred             HHHHHHHHHHHHHcCCCCCCccEEEeccCCCCcccHHHHHHHHhhcC--CCCceecc-cccccchHHHhHHHHHHHHHHH
Q psy5293         222 RGALLAMTRALIDANLSPGDISYINAHATSTPLGDVIELKAIGSLFP--AQRLMVSS-TKGAHGHLLGAAGNLESAFTIL  298 (359)
Q Consensus       222 ~~~~~a~~~al~~agl~~~dI~~ie~h~~~t~~~d~~E~~al~~~~~--~~~~~v~~-~k~~~Gh~~~AsG~~~~~~~~~  298 (359)
                      ......+++.+++++++.+|||++..|--+..     -++++.+.++  ..+++.+- .-...|.+-+||=..-+-.+..
T Consensus        43 ~~i~~~~~~~l~~~~~~~~did~~i~Hqgg~~-----Ild~v~~~L~L~~~k~~~s~~~l~~~GN~sSasip~~L~~~~~  117 (156)
T d1u0ua2          43 ANIENCMVEAFSQFKISDWNKLFWVVHPGGRA-----ILDRVEAKLNLDPTKLIPTRHVMSEYGNMSSACVHFILDQTRK  117 (156)
T ss_dssp             HHHHHHHHHHHGGGTCCCGGGSEEEECCSCHH-----HHHHHHHHHTCCTTTTHHHHHHHHHHCBCGGGHHHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHcCCChhhCceEeecCCcHH-----HHHHHHHHhCCCcccchhhHHHHhhcCCCCcccHHHHHHHHHH
Confidence            56667889999999999999999999955544     4444555544  22333211 1123477777764433333333


Q ss_pred             HHhcCCCCCCCCCCCCCccCCCCCCCCcccccccCCccEEEEeCcCcCcceeeEEEeecC
Q psy5293         299 AVHEGLVPPNVNLEDPCEEAGGYECPTAVTEWKTDGRRVALKNSFGFGGTNACLCIAEYK  358 (359)
Q Consensus       299 ~l~~~~ip~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~gG~~~~~il~~~~  358 (359)
                      .-..                       +......++...++..+||.|=+...++|++.+
T Consensus       118 ~~~~-----------------------~~~~~~~~~~~~~~~~gfG~Glt~~~~llr~~~  154 (156)
T d1u0ua2         118 ASLQ-----------------------NGCSTTGEGLEMGVLFGFGPGLTIETVVLKSVP  154 (156)
T ss_dssp             HHHH-----------------------HTCSBSBTTBSEEEEEEEETTTEEEEEEEEECB
T ss_pred             hhhh-----------------------ccCCCcCCCCCEEEEEEECHHHhHHHHHHeeCc
Confidence            2210                       011111123578999999988888889998864