Psyllid ID: psy5383

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140---
MLSMKYLNGNGAQPNDNFFRDRVLFRCKSTQKVHWRTHRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKILEFLSSVMSGEGSSSSIKKNKNY
cccccccccccccccccccccccccccccccccccccccccEEEEcHHHHHHHHHHccccEEEEcccccHHcccccccccEEEEEccccccccccccEEEEEEcccccEEEEEEccccccccccccccccccccccccccccc
ccHHHHccccccccccccHHHHHEccccccccccccccccccEEEcHHHHHHHHHHHcccEEEEccccccccEEEEccccEEEEEccccHHHcccccEEEEEEcccccEEEEEEccccccccccccccccccccccccccccc
mlsmkylngngaqpndnffrdRVLFRCKSTqkvhwrthrgvsytfgADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTlfsapnycgefdnagammivdenltcsfhimkpKKKILEFLSSvmsgegssssikknkny
mlsmkylngngaqpndnffrDRVLFRCKstqkvhwrthrgvSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKILEFLSsvmsgegssssikknkny
MLSMKYLNGNGAQPNDNFFRDRVLFRCKSTQKVHWRTHRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKILEFLssvmsgegssssIKKNKNY
****************NFFRDRVLFRCKSTQKVHWRTHRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKILEFL*******************
MLSMKYLNGNGAQPNDNFFRDRVLFRCKSTQKVHWRTHRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMK****************************
MLSMKYLNGNGAQPNDNFFRDRVLFRCKSTQKVHWRTHRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKILEFLSS*****************
ML**KYLNGNGAQPNDNFFRDRVLFRCKSTQKVHWRTHRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKK*************************
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
MLSMKYLNGNGAQPNDNFFRDRVLFRCKSTQKVHWRTHRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKILEFLSSVMSGEGSSSSIKKNKNY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query143 2.2.26 [Sep-21-2011]
P48484321 Serine/threonine-protein yes N/A 0.622 0.277 0.741 2e-34
P48489322 Serine/threonine-protein yes N/A 0.615 0.273 0.727 4e-34
P30366318 Serine/threonine-protein no N/A 0.643 0.289 0.698 3e-33
P23880322 Serine/threonine-protein yes N/A 0.727 0.322 0.619 3e-33
O04858304 Serine/threonine-protein N/A N/A 0.566 0.266 0.777 5e-33
P20654323 Serine/threonine-protein yes N/A 0.720 0.318 0.611 8e-33
O04857310 Serine/threonine-protein N/A N/A 0.601 0.277 0.732 8e-33
P22198316 Serine/threonine-protein N/A N/A 0.797 0.360 0.568 9e-33
P48482312 Serine/threonine-protein no N/A 0.601 0.275 0.732 1e-32
P48487316 Serine/threonine-protein N/A N/A 0.566 0.256 0.740 2e-32
>sp|P48484|PP14_ARATH Serine/threonine-protein phosphatase PP1 isozyme 4 OS=Arabidopsis thaliana GN=TOPP4 PE=2 SV=1 Back     alignment and function desciption
 Score =  144 bits (362), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 66/89 (74%), Positives = 76/89 (85%)

Query: 39  RGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAG 98
           RGVSYTFG D V EFL K ++DLVCRAHQVVE+GYEFFAD++LVT+FSAPNYCGEFDNAG
Sbjct: 231 RGVSYTFGPDKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAG 290

Query: 99  AMMIVDENLTCSFHIMKPKKKILEFLSSV 127
           AMM VDENL CSF I+KP +K  +F+ S 
Sbjct: 291 AMMSVDENLMCSFQILKPAEKKTKFMMST 319

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|P48489|PP1_ORYSJ Serine/threonine-protein phosphatase PP1 OS=Oryza sativa subsp. japonica GN=Os03g0268000 PE=2 SV=2 Back     alignment and function description
>sp|P30366|PP11_ARATH Serine/threonine-protein phosphatase PP1 isozyme 1 OS=Arabidopsis thaliana GN=TOPP1 PE=2 SV=1 Back     alignment and function description
>sp|P23880|PP12_SCHPO Serine/threonine-protein phosphatase PP1-2 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=sds21 PE=3 SV=1 Back     alignment and function description
>sp|O04858|PP13_TOBAC Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Nicotiana tabacum GN=NPP3 PE=2 SV=1 Back     alignment and function description
>sp|P20654|PP1_EMENI Serine/threonine-protein phosphatase PP1 OS=Emericella nidulans (strain FGSC A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=bimG PE=2 SV=1 Back     alignment and function description
>sp|O04857|PP12_TOBAC Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Nicotiana tabacum GN=NPP2 PE=2 SV=1 Back     alignment and function description
>sp|P22198|PP1_MAIZE Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1 Back     alignment and function description
>sp|P48482|PP12_ARATH Serine/threonine-protein phosphatase PP1 isozyme 2 OS=Arabidopsis thaliana GN=TOPP2 PE=2 SV=1 Back     alignment and function description
>sp|P48487|PP1_BRAOL Serine/threonine-protein phosphatase PP1 OS=Brassica oleracea GN=PP1 PE=2 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query143
359807053 315 uncharacterized protein LOC100807069 [Gl 0.615 0.279 0.772 2e-33
5917726 316 serine/threonine protein phosphatase 1 [ 0.622 0.281 0.752 3e-33
357137653 316 PREDICTED: serine/threonine-protein phos 0.860 0.389 0.576 3e-33
224109446 316 predicted protein [Populus trichocarpa] 0.615 0.278 0.75 7e-33
388495162113 unknown [Lotus japonicus] 0.685 0.867 0.68 9e-33
357512385 326 Serine/threonine protein phosphatase PP1 0.685 0.300 0.68 1e-32
114213458 326 catalytic subunit of protein phosphatase 0.685 0.300 0.69 1e-32
326493428 320 predicted protein [Hordeum vulgare subsp 0.860 0.384 0.576 1e-32
297823885 319 hypothetical protein ARALYDRAFT_483018 [ 0.622 0.278 0.741 1e-32
312282821 318 unnamed protein product [Thellungiella h 0.622 0.279 0.741 1e-32
>gi|359807053|ref|NP_001241084.1| uncharacterized protein LOC100807069 [Glycine max] gi|255637144|gb|ACU18903.1| unknown [Glycine max] Back     alignment and taxonomy information
 Score =  147 bits (370), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 68/88 (77%), Positives = 77/88 (87%)

Query: 39  RGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAG 98
           RGVSYTFG DMV EFL K ++DLVCRAHQVVE+GYEFFAD+KLVT+FSAPNYCGEFDNAG
Sbjct: 225 RGVSYTFGPDMVAEFLTKHDLDLVCRAHQVVEDGYEFFADRKLVTIFSAPNYCGEFDNAG 284

Query: 99  AMMIVDENLTCSFHIMKPKKKILEFLSS 126
           AMM VDENL CSF I+KP +K  +F+ S
Sbjct: 285 AMMSVDENLMCSFQILKPAEKKSKFVMS 312

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|5917726|gb|AAD56010.1|AF178530_1 serine/threonine protein phosphatase 1 [Malus x domestica] Back     alignment and taxonomy information
>gi|357137653|ref|XP_003570414.1| PREDICTED: serine/threonine-protein phosphatase PP1-like [Brachypodium distachyon] Back     alignment and taxonomy information
>gi|224109446|ref|XP_002315197.1| predicted protein [Populus trichocarpa] gi|222864237|gb|EEF01368.1| predicted protein [Populus trichocarpa] Back     alignment and taxonomy information
>gi|388495162|gb|AFK35647.1| unknown [Lotus japonicus] Back     alignment and taxonomy information
>gi|357512385|ref|XP_003626481.1| Serine/threonine protein phosphatase PP1 [Medicago truncatula] gi|355501496|gb|AES82699.1| Serine/threonine protein phosphatase PP1 [Medicago truncatula] Back     alignment and taxonomy information
>gi|114213458|dbj|BAF31132.1| catalytic subunit of protein phosphatase 1 [Vicia faba] Back     alignment and taxonomy information
>gi|326493428|dbj|BAJ85175.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326500666|dbj|BAJ94999.1| predicted protein [Hordeum vulgare subsp. vulgare] gi|326513058|dbj|BAK03436.1| predicted protein [Hordeum vulgare subsp. vulgare] Back     alignment and taxonomy information
>gi|297823885|ref|XP_002879825.1| hypothetical protein ARALYDRAFT_483018 [Arabidopsis lyrata subsp. lyrata] gi|297325664|gb|EFH56084.1| hypothetical protein ARALYDRAFT_483018 [Arabidopsis lyrata subsp. lyrata] Back     alignment and taxonomy information
>gi|312282821|dbj|BAJ34276.1| unnamed protein product [Thellungiella halophila] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query143
TAIR|locus:2063942321 TOPP4 "type one serine/threoni 0.601 0.267 0.755 2.9e-32
TAIR|locus:2043122318 TOPP1 "AT2G29400" [Arabidopsis 0.643 0.289 0.698 7.7e-32
GENEDB_PFALCIPARUM|PF14_0142304 PF14_0142 "serine/threonine pr 0.594 0.279 0.720 5.4e-31
UNIPROTKB|Q8ILV1304 PP1 "Serine/threonine-protein 0.594 0.279 0.720 5.4e-31
ZFIN|ZDB-GENE-030131-5512332 ppp1cab "protein phosphatase 1 0.622 0.268 0.692 8.8e-31
DICTYBASE|DDB_G0275619321 pppB "protein phosphatase 1, c 0.601 0.267 0.741 1.4e-30
UNIPROTKB|Q8MJ46323 PPP1CC "Serine/threonine-prote 0.594 0.263 0.720 1.4e-30
TAIR|locus:2024507322 TOPP3 "type one serine/threoni 0.594 0.263 0.709 1.4e-30
TAIR|locus:2168484312 TOPP2 "AT5G59160" [Arabidopsis 0.601 0.275 0.732 1.8e-30
TAIR|locus:2102762312 TOPP5 "type one serine/threoni 0.545 0.25 0.794 2.3e-30
TAIR|locus:2063942 TOPP4 "type one serine/threonine protein phosphatase 4" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
 Identities = 65/86 (75%), Positives = 75/86 (87%)

Query:    39 RGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAG 98
             RGVSYTFG D V EFL K ++DLVCRAHQVVE+GYEFFAD++LVT+FSAPNYCGEFDNAG
Sbjct:   231 RGVSYTFGPDKVSEFLTKHDLDLVCRAHQVVEDGYEFFADRQLVTVFSAPNYCGEFDNAG 290

Query:    99 AMMIVDENLTCSFHIMKPKKKILEFL 124
             AMM VDENL CSF I+KP +K  +F+
Sbjct:   291 AMMSVDENLMCSFQILKPAEKKTKFM 316
GO:0005737 "cytoplasm" evidence=ISM
GO:0016787 "hydrolase activity" evidence=IEA
GO:0004722 "protein serine/threonine phosphatase activity" evidence=ISS;IDA
GO:0006499 "N-terminal protein myristoylation" evidence=RCA
GO:0000164 "protein phosphatase type 1 complex" evidence=ISS
GO:0006470 "protein dephosphorylation" evidence=TAS
TAIR|locus:2043122 TOPP1 "AT2G29400" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
GENEDB_PFALCIPARUM|PF14_0142 PF14_0142 "serine/threonine protein phosphatase, putative" [Plasmodium falciparum (taxid:5833)] Back     alignment and assigned GO terms
UNIPROTKB|Q8ILV1 PP1 "Serine/threonine-protein phosphatase" [Plasmodium falciparum 3D7 (taxid:36329)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-030131-5512 ppp1cab "protein phosphatase 1, catalytic subunit, alpha isoform b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
DICTYBASE|DDB_G0275619 pppB "protein phosphatase 1, catalytic subunit" [Dictyostelium discoideum (taxid:44689)] Back     alignment and assigned GO terms
UNIPROTKB|Q8MJ46 PPP1CC "Serine/threonine-protein phosphatase PP1-gamma catalytic subunit" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
TAIR|locus:2024507 TOPP3 "type one serine/threonine protein phosphatase 3" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2168484 TOPP2 "AT5G59160" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2102762 TOPP5 "type one serine/threonine protein phosphatase 5" [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q8MJ46PP1G_CANFA3, ., 1, ., 3, ., 1, 60.73490.58040.2569yesN/A
P36873PP1G_HUMAN3, ., 1, ., 3, ., 1, 60.74070.56640.2507yesN/A
P20654PP1_EMENI3, ., 1, ., 3, ., 1, 60.61160.72020.3188yesN/A
O15757PP1_DICDI3, ., 1, ., 3, ., 1, 60.77770.56640.2523yesN/A
Q27497GLC7A_CAEEL3, ., 1, ., 3, ., 1, 60.71600.56640.2462yesN/A
P48484PP14_ARATH3, ., 1, ., 3, ., 1, 60.74150.62230.2772yesN/A
P48489PP1_ORYSJ3, ., 1, ., 3, ., 1, 60.72720.61530.2732yesN/A
P32598PP12_YEAST3, ., 1, ., 3, ., 1, 60.67770.62230.2852yesN/A
P61287PP1G_BOVIN3, ., 1, ., 3, ., 1, 60.74070.56640.2507yesN/A
P23880PP12_SCHPO3, ., 1, ., 3, ., 1, 60.61900.72720.3229yesN/A
P63087PP1G_MOUSE3, ., 1, ., 3, ., 1, 60.74070.56640.2507yesN/A
P63088PP1G_RAT3, ., 1, ., 3, ., 1, 60.74070.56640.2507yesN/A

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query143
cd07414293 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-li 7e-53
PTZ00480320 PTZ00480, PTZ00480, serine/threonine-protein phosp 4e-38
smart00156271 smart00156, PP2Ac, Protein phosphatase 2A homologu 2e-37
PTZ00244294 PTZ00244, PTZ00244, serine/threonine-protein phosp 8e-33
cd07415285 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phos 6e-27
PTZ00239303 PTZ00239, PTZ00239, serine/threonine protein phosp 2e-20
cd07419311 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 pho 7e-20
cd07417316 cd07417, MPP_PP5_C, PP5, C-terminal metallophospha 9e-19
cd00144225 cd00144, MPP_PPP_family, phosphoprotein phosphatas 2e-15
cd07420321 cd07420, MPP_RdgC, Drosophila melanogaster RdgC an 1e-12
cd07416305 cd07416, MPP_PP2B, PP2B, metallophosphatase domain 8e-12
COG0639155 COG0639, ApaH, Diadenosine tetraphosphatase and re 4e-10
cd07418377 cd07418, MPP_PP7, PP7, metallophosphatase domain 5e-06
>gnl|CDD|163657 cd07414, MPP_PP1_PPKL, PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain Back     alignment and domain information 
 Score =  168 bits (427), Expect = 7e-53
 Identities = 59/78 (75%), Positives = 69/78 (88%)

Query: 39  RGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAG 98
           RGVS+TFG D+V +FL K ++DL+CRAHQVVE+GYEFFA ++LVTLFSAPNYCGEFDNAG
Sbjct: 214 RGVSFTFGKDVVAKFLNKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 273

Query: 99  AMMIVDENLTCSFHIMKP 116
           AMM VDE L CSF I+KP
Sbjct: 274 AMMSVDETLMCSFQILKP 291

PP1 (protein phosphatase type 1) is a serine/threonine phosphatase that regulates many cellular processes including: cell-cycle progression, protein synthesis, muscle contraction, carbohydrate metabolism, transcription and neuronal signaling, through its interaction with at least 180 known targeting proteins. PP1 occurs in all tissues and regulates many pathways, ranging from cell-cycle progression to carbohydrate metabolism. Also included here are the PPKL (PP1 and kelch-like) enzymes including the PPQ, PPZ1, and PPZ2 fungal phosphatases. These PPKLs have a large N-terminal kelch repeat in addition to a C-terminal phosphoesterase domain. The PPP (phosphoprotein phosphatase) family, to which PP1 belongs, is one of two known protein phosphatase families specific for serine and threonine. The PPP family also includes: PP2A, PP2B (calcineurin), PP4, PP5, PP6, PP7, Bsu1, RdgC, PrpE, PrpA/PrpB, and ApA4 hydrolase. The PPP catalytic domain is defined by three conserved motifs (-GDXHG-, -GDXVDRG- and -GNHE-). The PPP enzyme family is ancient with members found in all eukaryotes, and in most bacterial and archeal genomes. Dephosphorylation of phosphoserines and phosphothreonines on target proteins plays a central role in the regulation of many cellular processes. PPPs belong to the metallophosphatase (MPP) superfamily. MPPs are functionally diverse, but all share a conserved domain with an active site consisting of two metal ions (usually manganese, iron, or zinc) coordinated with octahedral geometry by a cage of histidine, aspartate, and asparagine residues. The MPP superfamily includes: Mre11/SbcD-like exonucleases, Dbr1-like RNA lariat debranching enzymes, YfcE-like phosphodiesterases, purple acid phosphatases (PAPs), YbbF-like UDP-2,3-diacylglucosamine hydrolases, and acid sphingomyelinases (ASMases). The conserved domain is a double beta-sheet sandwich with a di-metal active site made up of residues located at the C-terminal side of the sheets. This domain is thought to allow for productive metal coordination. Length = 293
>gnl|CDD|185658 PTZ00480, PTZ00480, serine/threonine-protein phosphatase; Provisional Back     alignment and domain information
>gnl|CDD|197547 smart00156, PP2Ac, Protein phosphatase 2A homologues, catalytic domain Back     alignment and domain information
>gnl|CDD|140271 PTZ00244, PTZ00244, serine/threonine-protein phosphatase PP1; Provisional Back     alignment and domain information
>gnl|CDD|163658 cd07415, MPP_PP2A_PP4_PP6, PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|173488 PTZ00239, PTZ00239, serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information
>gnl|CDD|163662 cd07419, MPP_Bsu1_C, Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163660 cd07417, MPP_PP5_C, PP5, C-terminal metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163613 cd00144, MPP_PPP_family, phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163663 cd07420, MPP_RdgC, Drosophila melanogaster RdgC and related proteins, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|163659 cd07416, MPP_PP2B, PP2B, metallophosphatase domain Back     alignment and domain information
>gnl|CDD|223712 COG0639, ApaH, Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|163661 cd07418, MPP_PP7, PP7, metallophosphatase domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 143
PTZ00480320 serine/threonine-protein phosphatase; Provisional 100.0
cd07415285 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein 100.0
PTZ00244294 serine/threonine-protein phosphatase PP1; Provisio 100.0
KOG0372|consensus303 100.0
PTZ00239303 serine/threonine protein phosphatase 2A; Provision 100.0
cd07414293 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzyme 100.0
cd07417316 MPP_PP5_C PP5, C-terminal metallophosphatase domai 100.0
KOG0374|consensus331 100.0
smart00156271 PP2Ac Protein phosphatase 2A homologues, catalytic 100.0
cd07416305 MPP_PP2B PP2B, metallophosphatase domain. PP2B (ca 100.0
cd07420321 MPP_RdgC Drosophila melanogaster RdgC and related 100.0
cd07419311 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase a 100.0
cd07418377 MPP_PP7 PP7, metallophosphatase domain. PP7 is a p 99.97
KOG0373|consensus306 99.97
KOG0376|consensus476 99.94
KOG0371|consensus319 99.94
KOG0375|consensus 517 99.93
KOG0377|consensus 631 99.92
cd00144225 MPP_PPP_family phosphoprotein phosphatases of the 99.09
COG0639155 ApaH Diadenosine tetraphosphatase and related seri 97.84
cd07425208 MPP_Shelphs Shewanella-like phosphatases, metallop 94.86
>PTZ00480 serine/threonine-protein phosphatase; Provisional Back     alignment and domain information 
Probab=100.00  E-value=2.4e-36  Score=252.02  Aligned_cols=116  Identities=51%  Similarity=0.929  Sum_probs=107.8

Q ss_pred             cccccCCCCCCCCcceeeeeecCCCCCCCCCcc-ccCCceeEeChHHHHHHHHhcCCceEEeccceecCceEEeeCCeEE
Q psy5383           4 MKYLNGNGAQPNDNFFRDRVLFRCKSTQKVHWR-THRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLV   82 (143)
Q Consensus         4 i~~I~rp~~~~~~~~l~~DLLWsDP~~~~~~~~-~~RG~g~~FG~~~v~~fl~~~~l~~IIR~Hq~~~~G~~~~~~~~li   82 (143)
                      |++|+||...| ++.+++|||||||.....+|. ++||.|++||++++++||++||+++||||||++++||+++++++|+
T Consensus       188 i~~i~rp~~~~-~~~~~~dllWSDP~~~~~~~~~s~RG~g~~FG~~~~~~Fl~~n~l~~IiR~Hq~v~~G~~~~~~~~~i  266 (320)
T PTZ00480        188 IRRIMRPTDVP-DTGLLCDLLWSDPDKDVQGWADNERGVSYVFSQEIVQVFLKKHELDLICRAHQVVEDGYEFFSKRQLV  266 (320)
T ss_pred             HhcccCCCCCC-ccchhhheeecCcccccCCCccCCCCCccccCHHHHHHHHHhCCCcEEEEcCccccCceEEeCCCcEE
Confidence            67899997665 556679999999998788999 9999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccCcch
Q psy5383          83 TLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPKKKI  120 (143)
Q Consensus        83 TVFSa~nY~~~~~N~gAvl~i~~~~~~~~~~~~~~~~~  120 (143)
                      |||||||||+.++|.||+|.|+++++++|.+|+|.+.+
T Consensus       267 TvFSa~~Y~~~~~N~ga~l~i~~~~~~~~~~~~p~~~~  304 (320)
T PTZ00480        267 TLFSAPNYCGEFDNAGSMMTIDESLMCSFQILKPAEQG  304 (320)
T ss_pred             EEeCCcccCCCCCccEEEEEECCCCcEeEEEecCCccc
Confidence            99999999999999999999999999999999877653

>cd07415 MPP_PP2A_PP4_PP6 PP2A, PP4, and PP6 phosphoprotein phosphatases, metallophosphatase domain Back     alignment and domain information
>PTZ00244 serine/threonine-protein phosphatase PP1; Provisional Back     alignment and domain information
>KOG0372|consensus Back     alignment and domain information
>PTZ00239 serine/threonine protein phosphatase 2A; Provisional Back     alignment and domain information
>cd07414 MPP_PP1_PPKL PP1, PPKL (PP1 and kelch-like) enzymes, and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07417 MPP_PP5_C PP5, C-terminal metallophosphatase domain Back     alignment and domain information
>KOG0374|consensus Back     alignment and domain information
>smart00156 PP2Ac Protein phosphatase 2A homologues, catalytic domain Back     alignment and domain information
>cd07416 MPP_PP2B PP2B, metallophosphatase domain Back     alignment and domain information
>cd07420 MPP_RdgC Drosophila melanogaster RdgC and related proteins, metallophosphatase domain Back     alignment and domain information
>cd07419 MPP_Bsu1_C Arabidopsis thaliana Bsu1 phosphatase and related proteins, C-terminal metallophosphatase domain Back     alignment and domain information
>cd07418 MPP_PP7 PP7, metallophosphatase domain Back     alignment and domain information
>KOG0373|consensus Back     alignment and domain information
>KOG0376|consensus Back     alignment and domain information
>KOG0371|consensus Back     alignment and domain information
>KOG0375|consensus Back     alignment and domain information
>KOG0377|consensus Back     alignment and domain information
>cd00144 MPP_PPP_family phosphoprotein phosphatases of the metallophosphatase superfamily, metallophosphatase domain Back     alignment and domain information
>COG0639 ApaH Diadenosine tetraphosphatase and related serine/threonine protein phosphatases [Signal transduction mechanisms] Back     alignment and domain information
>cd07425 MPP_Shelphs Shewanella-like phosphatases, metallophosphatase domain Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query143
1s70_A330 Complex Between Protein Ser/thr Phosphatase-1 (delt 2e-32
1jk7_A323 Crystal Structure Of The Tumor-Promoter Okadaic Aci 2e-32
2o8a_A329 Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Leng 2e-32
1fjm_A330 Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isofor 4e-32
4g9j_A331 Protein SerTHR PHOSPHATASE-1 In Complex With Cell-P 4e-32
3egg_A329 Crystal Structure Of A Complex Between Protein Phos 4e-32
3v4y_A306 Crystal Structure Of The First Nuclear Pp1 Holoenzy 5e-32
3n5u_B300 Crystal Structure Of An Rb C-Terminal Peptide Bound 1e-31
3e7a_A299 Crystal Structure Of Protein Phosphatase-1 Bound To 1e-31
1u32_A293 Crystal Structure Of A Protein Phosphatase-1: Calci 7e-28
2iae_C309 Crystal Structure Of A Protein Phosphatase 2a (Pp2a 4e-14
3fga_C309 Structural Basis Of Pp2a And Sgo Interaction Length 4e-14
3c5w_C310 Complex Between Pp2a-Specific Methylesterase Pme-1 5e-14
2ie4_C309 Structure Of The Protein Phosphatase 2a Core Enzyme 5e-14
2nyl_C293 Crystal Structure Of Protein Phosphatase 2a (Pp2a) 5e-14
2ie3_C309 Structure Of The Protein Phosphatase 2a Core Enzyme 5e-14
3p71_C304 Crystal Structure Of The Complex Of Lcmt-1 And Pp2a 5e-14
1wao_1477 Pp5 Structure Length = 477 4e-12
1s95_A333 Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 4e-12
3h60_A315 Catalytic Domain Of Human SerineTHREONINE PHOSPHATA 4e-12
3icf_A335 Structure Of Protein SerineTHREONINE PHOSPHATASE FR 4e-08
2jog_A327 Structure Of The Calcineurin-Nfat Complex Length = 9e-07
1aui_A 521 Human Calcineurin Heterodimer Length = 521 9e-07
1m63_A372 Crystal Structure Of Calcineurin-Cyclophilin-Cyclos 9e-07
3ll8_A357 Crystal Structure Of Calcineurin In Complex With Ak 9e-07
2p6b_A383 Crystal Structure Of Human Calcineurin In Complex W 1e-06
1mf8_A373 Crystal Structure Of Human Calcineurin Complexed Wi 1e-06
1tco_A375 Ternary Complex Of A Calcineurin A Fragment, Calcin 1e-06
>pdb|1S70|A Chain A, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 330 Back     alignment and structure 
Iteration: 1

 Score =  134 bits (336), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 59/81 (72%), Positives = 71/81 (87%)
Query: 39  RGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAG 98
           RGVS+TFGAD+V +FL + ++DL+CRAHQVVE+GYEFFA ++LVTLFSAPNYCGEFDNAG
Sbjct: 223 RGVSFTFGADVVSKFLNRHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 282
Query: 99  AMMIVDENLTCSFHIMKPKKK 119
            MM VDE L CSF I+KP +K
Sbjct: 283 GMMSVDETLMCSFQILKPSEK 303
>pdb|1JK7|A Chain A, Crystal Structure Of The Tumor-Promoter Okadaic Acid Bound To Protein Phosphatase-1 Length = 323 Back     alignment and structure
>pdb|2O8A|A Chain A, Rat Pp1cgamma Complexed With Mouse Inhibitor-2 Length = 329 Back     alignment and structure
>pdb|1FJM|A Chain A, Protein SerineTHREONINE PHOSPHATASE-1 (Alpha Isoform, Type 1) Complexed With Microcystin-Lr Toxin Length = 330 Back     alignment and structure
>pdb|4G9J|A Chain A, Protein SerTHR PHOSPHATASE-1 In Complex With Cell-Permeable Peptide Length = 331 Back     alignment and structure
>pdb|3EGG|A Chain A, Crystal Structure Of A Complex Between Protein Phosphatase 1 Alpha (Pp1) And The Pp1 Binding And Pdz Domains Of Spinophilin Length = 329 Back     alignment and structure
>pdb|3V4Y|A Chain A, Crystal Structure Of The First Nuclear Pp1 Holoenzyme Length = 306 Back     alignment and structure
>pdb|3E7A|A Chain A, Crystal Structure Of Protein Phosphatase-1 Bound To The Natural Toxin Nodularin-R Length = 299 Back     alignment and structure
>pdb|1U32|A Chain A, Crystal Structure Of A Protein Phosphatase-1: Calcineurin Hybrid Bound To Okadaic Acid Length = 293 Back     alignment and structure
>pdb|2IAE|C Chain C, Crystal Structure Of A Protein Phosphatase 2a (Pp2a) Holoenzyme. Length = 309 Back     alignment and structure
>pdb|3FGA|C Chain C, Structural Basis Of Pp2a And Sgo Interaction Length = 309 Back     alignment and structure
>pdb|3C5W|C Chain C, Complex Between Pp2a-Specific Methylesterase Pme-1 And Pp2a Core Enzyme Length = 310 Back     alignment and structure
>pdb|2IE4|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Okadaic Acid Length = 309 Back     alignment and structure
>pdb|2NYL|C Chain C, Crystal Structure Of Protein Phosphatase 2a (Pp2a) Holoenzyme With The Catalytic Subunit Carboxyl Terminus Truncated Length = 293 Back     alignment and structure
>pdb|2IE3|C Chain C, Structure Of The Protein Phosphatase 2a Core Enzyme Bound To Tumor- Inducing Toxins Length = 309 Back     alignment and structure
>pdb|3P71|C Chain C, Crystal Structure Of The Complex Of Lcmt-1 And Pp2a Length = 304 Back     alignment and structure
>pdb|1WAO|1 Chain 1, Pp5 Structure Length = 477 Back     alignment and structure
>pdb|1S95|A Chain A, Structure Of SerineTHREONINE PROTEIN PHOSPHATASE 5 Length = 333 Back     alignment and structure
>pdb|3H60|A Chain A, Catalytic Domain Of Human SerineTHREONINE PHOSPHATASE 5 (Pp5c)with Two Mn2+ Atoms Length = 315 Back     alignment and structure
>pdb|3ICF|A Chain A, Structure Of Protein SerineTHREONINE PHOSPHATASE FROM SACCHAROMYCES Cerevisiae With Similarity To Human Phosphatase Pp5 Length = 335 Back     alignment and structure
>pdb|2JOG|A Chain A, Structure Of The Calcineurin-Nfat Complex Length = 327 Back     alignment and structure
>pdb|1AUI|A Chain A, Human Calcineurin Heterodimer Length = 521 Back     alignment and structure
>pdb|1M63|A Chain A, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin Shows Common But Distinct Recognition Of Immunophilin-Drug Complexes Length = 372 Back     alignment and structure
>pdb|3LL8|A Chain A, Crystal Structure Of Calcineurin In Complex With Akap79 Peptide Length = 357 Back     alignment and structure
>pdb|2P6B|A Chain A, Crystal Structure Of Human Calcineurin In Complex With Pvivit Peptide Length = 383 Back     alignment and structure
>pdb|1MF8|A Chain A, Crystal Structure Of Human Calcineurin Complexed With Cyclosporin A And Human Cyclophilin Length = 373 Back     alignment and structure
>pdb|1TCO|A Chain A, Ternary Complex Of A Calcineurin A Fragment, Calcineurin B, Fkbp12 And The Immunosuppressant Drug Fk506 (tacrolimus) Length = 375 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query143
2ie4_C309 PP2A-alpha;, serine/threonine-protein phosphatase 4e-52
3e7a_A299 PP-1A, serine/threonine-protein phosphatase PP1-al 9e-51
1fjm_A330 Protein serine/threonine phosphatase-1 (alpha ISO 2e-50
3h63_A315 Serine/threonine-protein phosphatase 5; metalloenz 3e-42
3icf_A335 PPT, serine/threonine-protein phosphatase T; IRO m 1e-41
1wao_1477 Serine/threonine protein phosphatase 5; hydrolase, 5e-40
1aui_A 521 Calcineurin, serine/threonine phosphatase 2B; hydr 1e-39
3ll8_A357 Serine/threonine-protein phosphatase 2B catalytic 2e-39
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Length = 309 Back     alignment and structure
 Score =  166 bits (423), Expect = 4e-52
 Identities = 36/78 (46%), Positives = 46/78 (58%)

Query: 39  RGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAG 98
           RG  YTFG D+   F     + LV RAHQ+V EGY +  D+ +VT+FSAPNYC    N  
Sbjct: 214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQA 273

Query: 99  AMMIVDENLTCSFHIMKP 116
           A+M +D+ L  SF    P
Sbjct: 274 AIMELDDTLKYSFLQFDP 291
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Length = 299 Back     alignment and structure
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Length = 330 Back     alignment and structure
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Length = 315 Back     alignment and structure
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Length = 335 Back     alignment and structure
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Length = 477 Back     alignment and structure
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Length = 521 Back     alignment and structure
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Length = 357 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query143
3e7a_A299 PP-1A, serine/threonine-protein phosphatase PP1-al 100.0
3icf_A335 PPT, serine/threonine-protein phosphatase T; IRO m 100.0
3h63_A315 Serine/threonine-protein phosphatase 5; metalloenz 100.0
3ll8_A357 Serine/threonine-protein phosphatase 2B catalytic 100.0
2ie4_C309 PP2A-alpha;, serine/threonine-protein phosphatase 100.0
1fjm_A330 Protein serine/threonine phosphatase-1 (alpha ISO 99.98
1aui_A 521 Calcineurin, serine/threonine phosphatase 2B; hydr 99.97
1wao_1477 Serine/threonine protein phosphatase 5; hydrolase, 99.97
2z72_A342 Protein-tyrosine-phosphatase; cold-active enzyme, 99.35
2dfj_A280 Diadenosinetetraphosphatase; helices and strands m 97.47
>3e7a_A PP-1A, serine/threonine-protein phosphatase PP1-alpha Ca subunit; carbohydrate metabolism, cell cycle, cell division; HET: 1ZN; 1.63A {Homo sapiens} SCOP: d.159.1.3 PDB: 3e7b_A* 3egg_A* 3egh_A* 3hvq_A 3v4y_A* 3n5u_A 1jk7_A* 1it6_A* 2bcd_A* 2bdx_A* 2o8g_A 2o8a_A 1u32_A* 1s70_A* Back     alignment and structure
Probab=100.00  E-value=1.6e-38  Score=261.92  Aligned_cols=114  Identities=55%  Similarity=0.977  Sum_probs=107.3

Q ss_pred             ccccccCCCCCCCCcceeeeeecCCCCCCCCCcc-ccCCceeEeChHHHHHHHHhcCCceEEeccceecCceEEeeCCeE
Q psy5383           3 SMKYLNGNGAQPNDNFFRDRVLFRCKSTQKVHWR-THRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKL   81 (143)
Q Consensus         3 ~i~~I~rp~~~~~~~~l~~DLLWsDP~~~~~~~~-~~RG~g~~FG~~~v~~fl~~~~l~~IIR~Hq~~~~G~~~~~~~~l   81 (143)
                      .|++|.||.+.| +..+++|||||||.....+|. |+||+|+.||++++++||++|++++||||||++++||+++++++|
T Consensus       184 ~i~~i~R~~~~p-~~~~~~dllWsDP~~~~~~~~~~~RG~~~~fG~~~~~~fl~~n~l~~IiR~Hq~v~~Gy~~~~~~~~  262 (299)
T 3e7a_A          184 QIRRIMRPTDVP-DQGLLCDLLWSDPDKDVQGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQL  262 (299)
T ss_dssp             HHHTCCSSCCCC-SSSHHHHHHHCEECTTCSSEEECTTSSSEEECHHHHHHHHHHHTCSEEEECCSCCTTSEEEETTTTE
T ss_pred             HHHhccCCCcCC-cchhhhhhhcCCccccccCcccCCCCcceeeCHHHHHHHHHHCCCeEEEEcCeeeecceEEecCCeE
Confidence            378999997666 455669999999998888999 999999999999999999999999999999999999999999999


Q ss_pred             EEEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccC
Q psy5383          82 VTLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPK  117 (143)
Q Consensus        82 iTVFSa~nY~~~~~N~gAvl~i~~~~~~~~~~~~~~  117 (143)
                      +|||||||||+.++|.||+|.|+++++++|++|+|.
T Consensus       263 iTvfSapnY~~~~~N~~a~l~~~~~~~~~~~~~~~~  298 (299)
T 3e7a_A          263 VTLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA  298 (299)
T ss_dssp             EEEBCCSSGGGTCCCCEEEEEECTTCCEEEEEECCC
T ss_pred             EEEECCcccCCCCCccEEEEEECCCCcEEEEEecCC
Confidence            999999999999999999999999999999999986
>3icf_A PPT, serine/threonine-protein phosphatase T; IRO metalloprotein, structural genomics, PSI-2, protein structu initiative; 2.30A {Saccharomyces cerevisiae} Back     alignment and structure
>3h63_A Serine/threonine-protein phosphatase 5; metalloenzyme, inhibitors, drug design, cytoplasm, hydrolase, iron, manganese, metal-binding, nucleus; HET: NHC; 1.30A {Homo sapiens} SCOP: d.159.1.3 PDB: 3h60_A* 3h61_A* 3h62_C* 3h64_A* 3h66_A 3h67_A* 3h68_A* 3h69_A* 1s95_A Back     alignment and structure
>3ll8_A Serine/threonine-protein phosphatase 2B catalytic alpha isoform; protein-peptide docking, protein targeting, AKA beta-augmentation, calmodulin-binding, membrane, hydrolase; 2.00A {Homo sapiens} PDB: 2p6b_A 1m63_A* 1tco_A* 1mf8_A* 2jog_A Back     alignment and structure
>2ie4_C PP2A-alpha;, serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform; protein-protein complex, heat repeat, signaling protein; HET: OKA; 2.60A {Homo sapiens} SCOP: d.159.1.3 PDB: 2npp_C* 3dw8_C* 3k7v_C* 3k7w_C* 3c5w_C 2ie3_C* 3fga_C* 2iae_C* 3p71_C* 2nym_C* 2nyl_C* Back     alignment and structure
>1fjm_A Protein serine/threonine phosphatase-1 (alpha ISO 1); hydrolase, toxin, hydrolase-hydrolase inhibitor complex; HET: 1ZN; 2.10A {Oryctolagus cuniculus} SCOP: d.159.1.3 Back     alignment and structure
>1aui_A Calcineurin, serine/threonine phosphatase 2B; hydrolase, immunosuppression; 2.10A {Homo sapiens} SCOP: d.159.1.3 Back     alignment and structure
>1wao_1 Serine/threonine protein phosphatase 5; hydrolase, protein-protein interactions, TPR, super-helix,; 2.9A {Homo sapiens} SCOP: a.118.8.1 d.159.1.3 Back     alignment and structure
>2z72_A Protein-tyrosine-phosphatase; cold-active enzyme, psychrophIle, hydrolase; 1.10A {Shewanella SP} PDB: 1v73_A 2zbm_A Back     alignment and structure
>2dfj_A Diadenosinetetraphosphatase; helices and strands mixture, hydrolase; 2.72A {Shigella flexneri 2A} Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 143
d1jk7a_294 d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human 3e-37
d3c5wc1288 d.159.1.3 (C:6-293) Protein phosphatase 2A catalyt 1e-35
d1s95a_324 d.159.1.3 (A:) Serine/threonine protein phosphatas 2e-34
d1auia_ 473 d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calc 9e-28
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Length = 294 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase-1 (PP-1)
species: Human (Homo sapiens), beta isoform [TaxId: 9606]

 Score =  126 bits (318), Expect = 3e-37
 Identities = 59/78 (75%), Positives = 70/78 (89%)

Query: 39  RGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLVTLFSAPNYCGEFDNAG 98
           RGVS+TFGA++V +FL K ++DL+CRAHQVVE+GYEFFA ++LVTLFSAPNYCGEFDNAG
Sbjct: 216 RGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLVTLFSAPNYCGEFDNAG 275

Query: 99  AMMIVDENLTCSFHIMKP 116
           AMM VDE L CSF I+KP
Sbjct: 276 AMMSVDETLMCSFQILKP 293
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 288 Back     information, alignment and structure
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Length = 324 Back     information, alignment and structure
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Length = 473 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query143
d1jk7a_294 Protein phosphatase-1 (PP-1) {Human (Homo sapiens) 100.0
d3c5wc1288 Protein phosphatase 2A catalytic subunit alpha iso 100.0
d1s95a_324 Serine/threonine protein phosphatase 5, PP5 {Human 100.0
d1auia_ 473 Protein phosphatase-2B (PP-2B, calcineurin A subun 99.97
>d1jk7a_ d.159.1.3 (A:) Protein phosphatase-1 (PP-1) {Human (Homo sapiens), beta isoform [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: Metallo-dependent phosphatases
superfamily: Metallo-dependent phosphatases
family: Protein serine/threonine phosphatase
domain: Protein phosphatase-1 (PP-1)
species: Human (Homo sapiens), beta isoform [TaxId: 9606]

Probab=100.00  E-value=3e-37  Score=251.82  Aligned_cols=113  Identities=56%  Similarity=0.994  Sum_probs=106.1

Q ss_pred             cccccCCCCCCCCcceeeeeecCCCCCCCCCcc-ccCCceeEeChHHHHHHHHhcCCceEEeccceecCceEEeeCCeEE
Q psy5383           4 MKYLNGNGAQPNDNFFRDRVLFRCKSTQKVHWR-THRGVSYTFGADMVHEFLKKFNIDLVCRAHQVVEEGYEFFADKKLV   82 (143)
Q Consensus         4 i~~I~rp~~~~~~~~l~~DLLWsDP~~~~~~~~-~~RG~g~~FG~~~v~~fl~~~~l~~IIR~Hq~~~~G~~~~~~~~li   82 (143)
                      |++|+||.+.+ ++.+++|||||||.....+|. ++||.|+.||++++++||++||+++||||||++++||++.++++|+
T Consensus       181 i~~i~r~~~~~-~~~~~~dllWsDP~~~~~~~~~~~RG~g~~fg~~~~~~Fl~~n~l~~IIR~He~~~~G~~~~~~~~vi  259 (294)
T d1jk7a_         181 IRRIMRPTDVP-DQGLLCDLLWSDPDKDVLGWGENDRGVSFTFGAEVVAKFLHKHDLDLICRAHQVVEDGYEFFAKRQLV  259 (294)
T ss_dssp             HHTCCSSCCCC-SSSHHHHHHHCEECSSCSSEEECTTSSSEEECHHHHHHHHHHTTCSEEEECCSCCTTSEEEETTTTEE
T ss_pred             hhhccCCCCCC-CcchhhhhhhcCCccccCCCCCCCCCCccccCHHHHHHHHHHCCCCEEEEcCccccCCcEEecCCcEE
Confidence            67899996555 455669999999998888999 9999999999999999999999999999999999999999999999


Q ss_pred             EEecCCCCCCCCCCeEEEEEEcCCCceEEEEEccC
Q psy5383          83 TLFSAPNYCGEFDNAGAMMIVDENLTCSFHIMKPK  117 (143)
Q Consensus        83 TVFSa~nY~~~~~N~gAvl~i~~~~~~~~~~~~~~  117 (143)
                      |||||||||+.++|.||+|.|+++++++|.+|+|+
T Consensus       260 TiFSa~nY~~~~~N~gail~i~~~~~~~~~~~~p~  294 (294)
T d1jk7a_         260 TLFSAPNYCGEFDNAGAMMSVDETLMCSFQILKPA  294 (294)
T ss_dssp             EEBCCTTGGGTCCCCEEEEEECTTSCEEEEEECCC
T ss_pred             EEecCCCcCCCCCccEEEEEECCCCcEeEEEecCC
Confidence            99999999999899999999999999999999985
>d3c5wc1 d.159.1.3 (C:6-293) Protein phosphatase 2A catalytic subunit alpha isoform, PP2A-alpha {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1s95a_ d.159.1.3 (A:) Serine/threonine protein phosphatase 5, PP5 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1auia_ d.159.1.3 (A:) Protein phosphatase-2B (PP-2B, calcineurin A subunit) {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure