Psyllid ID: psy5439
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
Close Homologs for Annotation Transfer
Close Homologs in the Non-Redundant Database Detected by BLAST 
Original result of BLAST against Nonredundant Database
GI ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 381 | ||||||
| 242020344 | 482 | glycoprotein 3-alpha-L-fucosyltransferas | 0.895 | 0.707 | 0.604 | 1e-126 | |
| 157130504 | 419 | alpha(1,3)fucosyltransferase [Aedes aegy | 0.900 | 0.818 | 0.574 | 1e-121 | |
| 170054871 | 454 | glycoprotein 3-alpha-L-fucosyltransferas | 0.897 | 0.753 | 0.570 | 1e-121 | |
| 347969435 | 379 | AGAP003191-PA [Anopheles gambiae str. PE | 0.863 | 0.868 | 0.596 | 1e-120 | |
| 312384756 | 498 | hypothetical protein AND_01582 [Anophele | 0.881 | 0.674 | 0.571 | 1e-119 | |
| 328704169 | 501 | PREDICTED: glycoprotein 3-alpha-L-fucosy | 0.887 | 0.674 | 0.577 | 1e-118 | |
| 350399733 | 451 | PREDICTED: glycoprotein 3-alpha-L-fucosy | 0.876 | 0.740 | 0.591 | 1e-118 | |
| 340712422 | 451 | PREDICTED: glycoprotein 3-alpha-L-fucosy | 0.876 | 0.740 | 0.585 | 1e-117 | |
| 380021469 | 452 | PREDICTED: glycoprotein 3-alpha-L-fucosy | 0.876 | 0.738 | 0.574 | 1e-116 | |
| 383862329 | 452 | PREDICTED: glycoprotein 3-alpha-L-fucosy | 0.876 | 0.738 | 0.577 | 1e-116 |
| >gi|242020344|ref|XP_002430615.1| glycoprotein 3-alpha-L-fucosyltransferase A, putative [Pediculus humanus corporis] gi|212515787|gb|EEB17877.1| glycoprotein 3-alpha-L-fucosyltransferase A, putative [Pediculus humanus corporis] | Back alignment and taxonomy information |
|---|
Score = 457 bits (1176), Expect = e-126, Method: Compositional matrix adjust.
Identities = 229/379 (60%), Positives = 269/379 (70%), Gaps = 38/379 (10%)
Query: 38 EKYWFMKNGTRKPTPAQINPRTNRRDSKLWPKEDPGQDRIVNQLMYVPNNYDS------- 90
E+ WF GTR+P P ++N +T R+ +KLWP ED G DRI+NQLM+VP
Sbjct: 104 ERPWFFNGGTRRPLPTRVNRKTGRKLAKLWPHEDWGDDRIINQLMFVPPPSPPPRPVEKK 163
Query: 91 -KNVKKILLFNALTSWNVKLGSSMF--SNCPVNACALTTNKAE----------------- 130
+ +KKIL + L SWN+K G +F S CPV+ C +T +++E
Sbjct: 164 PEKLKKILFYFGLGSWNLKPGRDIFIESKCPVDTCTVTASQSEAQNADAILFKDRFVHPG 223
Query: 131 ----SPFVWALYFLECPYHTQHVAHNDVFNWTATYRSDSDIVTPYEKWVYYDDRHKQMPL 186
S VW LYFLECPYHTQH+ NDV NWTATYR DSDIV PYE+WVYYD + KQ +
Sbjct: 224 HIRHSRQVWILYFLECPYHTQHIKFNDVINWTATYRRDSDIVAPYERWVYYDPKTKQKTI 283
Query: 187 DKMKNYAANKTHKVAWFVSNCGAKNNRLQYAHELGKYIEVDIYGSCGSKKCPRI-----S 241
KNYAANKT VAWFVSNC A+NNRLQYA+EL KYI VDIYG+CGSKKCPR
Sbjct: 284 PD-KNYAANKTKTVAWFVSNCAARNNRLQYANELKKYIGVDIYGACGSKKCPRFPVDSKE 342
Query: 242 KCFRLLDTKYKFYLAFENSNCVDYITEKLYINGLSHNVLPIVMGARPEDYKKAAPMNSYI 301
CF++LD YKFYLAFENSNC DYITEKL++NGL +VLPIVMGA PEDY K+AP +SYI
Sbjct: 343 MCFQMLDKDYKFYLAFENSNCRDYITEKLFVNGLGRDVLPIVMGAHPEDYAKSAPEHSYI 402
Query: 302 HVDDFPSAKHLAEYLNKLDANDTLYNSYFRWKGTGEFVNTFFWCRLCAMLHDSFPIKSYS 361
HVDDF S K LA YL+ LD ND LYNSYF WKGTGEF+NT+F+CRLCAMLHD++P KSY
Sbjct: 403 HVDDFESPKALANYLHALDKNDDLYNSYFLWKGTGEFINTYFFCRLCAMLHDNYPAKSYK 462
Query: 362 DINEWWRG-GTCTTGSWRK 379
DINEWWRG G CT SWR+
Sbjct: 463 DINEWWRGPGVCTQRSWRE 481
|
Source: Pediculus humanus corporis Species: Pediculus humanus Genus: Pediculus Family: Pediculidae Order: Phthiraptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|157130504|ref|XP_001661902.1| alpha(1,3)fucosyltransferase [Aedes aegypti] gi|108871886|gb|EAT36111.1| AAEL011784-PA [Aedes aegypti] | Back alignment and taxonomy information |
|---|
| >gi|170054871|ref|XP_001863326.1| glycoprotein 3-alpha-L-fucosyltransferase A [Culex quinquefasciatus] gi|167875013|gb|EDS38396.1| glycoprotein 3-alpha-L-fucosyltransferase A [Culex quinquefasciatus] | Back alignment and taxonomy information |
|---|
| >gi|347969435|ref|XP_312888.5| AGAP003191-PA [Anopheles gambiae str. PEST] gi|333468523|gb|EAA08406.5| AGAP003191-PA [Anopheles gambiae str. PEST] | Back alignment and taxonomy information |
|---|
| >gi|312384756|gb|EFR29408.1| hypothetical protein AND_01582 [Anopheles darlingi] | Back alignment and taxonomy information |
|---|
| >gi|328704169|ref|XP_001947151.2| PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
| >gi|350399733|ref|XP_003485621.1| PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Bombus impatiens] | Back alignment and taxonomy information |
|---|
| >gi|340712422|ref|XP_003394759.1| PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
| >gi|380021469|ref|XP_003694587.1| PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Apis florea] | Back alignment and taxonomy information |
|---|
| >gi|383862329|ref|XP_003706636.1| PREDICTED: glycoprotein 3-alpha-L-fucosyltransferase A-like [Megachile rotundata] | Back alignment and taxonomy information |
|---|
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST 
Original result of BLAST against Gene Ontology (AMIGO)
ID ![]() |
Alignment graph ![]() |
Length ![]() |
Definition ![]() |
Q cover ![]() |
H cover ![]() |
Identity ![]() |
E-value ![]() |
| Query | 381 | ||||||
| FB|FBgn0036485 | 503 | FucTA "FucTA" [Drosophila mela | 0.650 | 0.493 | 0.652 | 3.3e-115 | |
| FB|FBgn0044872 | 425 | FucTC "FucTC" [Drosophila mela | 0.603 | 0.541 | 0.384 | 8.3e-39 | |
| MGI|MGI:95594 | 433 | Fut4 "fucosyltransferase 4" [M | 0.598 | 0.526 | 0.381 | 1.3e-38 | |
| UNIPROTKB|P22083 | 530 | FUT4 "Alpha-(1,3)-fucosyltrans | 0.682 | 0.490 | 0.362 | 4.3e-38 | |
| UNIPROTKB|G3V757 | 433 | Fut4 "Alpha-(1,3)-fucosyltrans | 0.629 | 0.554 | 0.373 | 4.3e-38 | |
| UNIPROTKB|Q8HZR3 | 398 | FUT4 "Alpha-(1,3)-fucosyltrans | 0.632 | 0.605 | 0.373 | 7e-38 | |
| UNIPROTKB|F1MDG4 | 398 | FUT4 "Alpha-(1,3)-fucosyltrans | 0.601 | 0.575 | 0.378 | 1.9e-37 | |
| RGD|619954 | 433 | Fut4 "fucosyltransferase 4 (al | 0.629 | 0.554 | 0.365 | 1.3e-36 | |
| UNIPROTKB|F1PRB6 | 246 | FUT4 "Uncharacterized protein" | 0.553 | 0.857 | 0.381 | 1.7e-36 | |
| UNIPROTKB|J9P0K8 | 383 | FUT5 "Uncharacterized protein" | 0.587 | 0.584 | 0.390 | 2.1e-36 |
| FB|FBgn0036485 FucTA "FucTA" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 920 (328.9 bits), Expect = 3.3e-115, Sum P(2) = 3.3e-115
Identities = 167/256 (65%), Positives = 196/256 (76%)
Query: 129 AESPFVWALYFLECPYHTQHVAHNDVFNWTATYRSDSDIVTPYEKWVYYDDRHKQMPLDK 188
+ S V LY+LECPYHTQ+V D NWTATYR DS IV PYEKW YYD + +Q D
Sbjct: 235 SNSKQVSMLYYLECPYHTQNVKVPDAINWTATYRRDSTIVAPYEKWQYYDTKVQQQEQDI 294
Query: 189 MKNYAANKTHKVAWFVSNCGAKNNRLQYAHELGKYIEVDIYGSCGSKKCPRIS--KCFRL 246
NY+ NKT KVAWFVSNCGA+N RLQYAHEL KYIEVDIYG+CG+ KC R + KCF +
Sbjct: 295 --NYSVNKTKKVAWFVSNCGARNGRLQYAHELQKYIEVDIYGACGNFKCSRSTADKCFEI 352
Query: 247 LDTKYKFYLAFENSNCVDYITEKLYINGLSHNVLPIVMGARPEDYKKAAPMNSYIHVDDF 306
LD YKFYLAFENSNC DYITEK ++N L+ VLPIVMGARPEDY+ +AP SYIHVD+F
Sbjct: 353 LDNDYKFYLAFENSNCKDYITEKFFVNALNRRVLPIVMGARPEDYEVSAPRRSYIHVDEF 412
Query: 307 PSAKHLAEYLNKLDANDTLYNSYFRWKGTGEFVNTFFWCRLCAMLHDSFPIKS---YSDI 363
S K LAEYL LD +D LYNSYF+WKGTGEF+NT++WCR+CA LH+ ++ Y+D+
Sbjct: 413 SSPKELAEYLRILDHDDELYNSYFKWKGTGEFINTYYWCRVCATLHNEEQLRKPRWYTDL 472
Query: 364 NEWWRG-GTCTTGSWR 378
N+WWRG G CTT SWR
Sbjct: 473 NDWWRGPGVCTTRSWR 488
|
|
| FB|FBgn0044872 FucTC "FucTC" [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
| MGI|MGI:95594 Fut4 "fucosyltransferase 4" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|P22083 FUT4 "Alpha-(1,3)-fucosyltransferase" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|G3V757 Fut4 "Alpha-(1,3)-fucosyltransferase" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|Q8HZR3 FUT4 "Alpha-(1,3)-fucosyltransferase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1MDG4 FUT4 "Alpha-(1,3)-fucosyltransferase" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
| RGD|619954 Fut4 "fucosyltransferase 4 (alpha (1,3) fucosyltransferase, myeloid-specific)" [Rattus norvegicus (taxid:10116)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|F1PRB6 FUT4 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
| UNIPROTKB|J9P0K8 FUT5 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Prediction of Enzyme Commission (EC) Number
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 381 | |||
| pfam00852 | 353 | pfam00852, Glyco_transf_10, Glycosyltransferase fa | 2e-78 |
| >gnl|CDD|216152 pfam00852, Glyco_transf_10, Glycosyltransferase family 10 (fucosyltransferase) | Back alignment and domain information |
|---|
Score = 244 bits (626), Expect = 2e-78
Identities = 96/242 (39%), Positives = 132/242 (54%), Gaps = 15/242 (6%)
Query: 135 WALYFLECPYHTQHVAH-NDVFNWTATYRSDSDIVTPYEKWVYYDDRHKQMPLDKMKNYA 193
W + +E P ++ + +FNWT TYR DSDI PY Y + +
Sbjct: 117 WVWFNMESPSNSPRLPGLEGLFNWTMTYRRDSDIFVPYG---YLVPLEGPEEVRVLPEIL 173
Query: 194 ANKTHKVAWFVSNCGAKNNRLQYAHELGKYIEVDIYGSCGSKKCPRISKCFRLLDTKYKF 253
K+ VAW VSNC + R++Y EL K+IEVD+YG C P C+ ++YKF
Sbjct: 174 EKKSKLVAWVVSNCNEPSKRVKYYRELSKHIEVDVYGKCFGDPLPD--GCYLPTLSQYKF 231
Query: 254 YLAFENSNCVDYITEKLYINGLSHNVLPIVMGARPEDYKKAAPMNSYIHVDDFPSAKHLA 313
YLAFENS C DYITEKL+ N L+ +P+V+G +Y+ P +S+IHVDDF S K LA
Sbjct: 232 YLAFENSLCKDYITEKLW-NALAAGAVPVVLGPPRANYENFVPPDSFIHVDDFASPKELA 290
Query: 314 EYLNKLDANDTLYNSYFRW----KGTGEFVNTFF---WCRLCAMLHDSFPI-KSYSDINE 365
EYL LD ND Y YF W + + + +F+ +C+ C L + P K Y D+N
Sbjct: 291 EYLKSLDKNDDEYRRYFEWRKKYRVANQRLLSFWREPYCQACDRLQRAEPRYKVYKDLNG 350
Query: 366 WW 367
W+
Sbjct: 351 WF 352
|
This family of Fucosyltransferases are the enzymes transferring fucose from GDP-Fucose to GlcNAc in an alpha1,3 linkage. This family is know as glycosyltransferase family 10. Length = 353 |
Conserved Domains Detected by HHsearch 
Original result of HHsearch against CDD database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 381 | |||
| PF00852 | 349 | Glyco_transf_10: Glycosyltransferase family 10 (fu | 100.0 | |
| KOG2619|consensus | 372 | 100.0 | ||
| PF03016 | 302 | Exostosin: Exostosin family; InterPro: IPR004263 H | 96.78 | |
| KOG1021|consensus | 464 | 92.97 | ||
| PF13524 | 92 | Glyco_trans_1_2: Glycosyl transferases group 1 | 92.48 |
| >PF00852 Glyco_transf_10: Glycosyltransferase family 10 (fucosyltransferase); InterPro: IPR001503 The biosynthesis of disaccharides, oligosaccharides and polysaccharides involves the action of hundreds of different glycosyltransferases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-71 Score=551.26 Aligned_cols=268 Identities=44% Similarity=0.774 Sum_probs=100.6
Q ss_pred CCCeEEEEeccCCCCccccCCCCCCCCCC----CCcEEEecCCCCCc---------------------------eEEEEe
Q psy5439 91 KNVKKILLFNALTSWNVKLGSSMFSNCPV----NACALTTNKAESPF---------------------------VWALYF 139 (381)
Q Consensus 91 ~~~k~ILlw~~~~~w~~~~g~~~f~~C~v----~~C~iT~dr~~~~~---------------------------~wv~~s 139 (381)
.+.+.||+|++...+... +.+|+. ++|.+|+||+++.+ +||+|+
T Consensus 45 ~~~~~IL~W~~~f~~~~~-----~~~C~~~~~~~~C~lT~dr~~~~~aDAVVFh~~~~~~~~~~lP~~~R~~~Q~wV~~s 119 (349)
T PF00852_consen 45 KKKKLILLWTWPFGVPFD-----LSKCPDNFGIGNCELTNDRSLLSEADAVVFHGRDFSESLSDLPKKRRPPHQRWVFWS 119 (349)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred cccccccccccccccccc-----ccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 556789999865333222 468865 47999999997543 899999
Q ss_pred cCCCcCCC-CCCccccccceeeeccCCCccCCcccceeccccccCCChhhhccccccCcceEEEEEeccCCcchHHHHHH
Q psy5439 140 LECPYHTQ-HVAHNDVFNWTATYRSDSDIVTPYEKWVYYDDRHKQMPLDKMKNYAANKTHKVAWFVSNCGAKNNRLQYAH 218 (381)
Q Consensus 140 ~EsP~~~~-~~~~~~~FNwTMTYR~DSDI~~pYg~~~~~~~~~~~~~~~~~~~~~~~K~k~vaw~vSnC~~~~~R~~yv~ 218 (381)
+|||.++. ...+.++||||||||+||||++|||.+......... ....+...+|+++|+||+|||++.++|++|++
T Consensus 120 ~ESP~~~~~~~~~~~~FN~TMTYr~dSDi~~py~~~~~~~~~~~~---~~~~~~~~~K~~~~~w~~Snc~~~~~R~~~~~ 196 (349)
T PF00852_consen 120 MESPSNTPRLKDFDNFFNWTMTYRRDSDIPLPYGYFSPRESPSEK---DDLPNILKKKTKLAAWIVSNCNPHSGREEYVR 196 (349)
T ss_dssp --------------------------------------------------------TSSEEEEE--S-S--H-HHHHHHH
T ss_pred ccccccccccccccccccccccccccccccccccccccccccccc---ccccccccCCCceEEEEeeCcCCcccHHHHHH
Confidence 99999963 346788999999999999999999976532221111 12244567899999999999999989999999
Q ss_pred HHhcCCeEeEcCCCCCCCCCCchhHHHhhcccceEEEeeccCCCCccchHHHHHhhhcCCcceEEEcCCccccccCCCCC
Q psy5439 219 ELGKYIEVDIYGSCGSKKCPRISKCFRLLDTKYKFYLAFENSNCVDYITEKLYINGLSHNVLPIVMGARPEDYKKAAPMN 298 (381)
Q Consensus 219 eL~k~i~VD~yG~C~~~~c~~~~~c~~~l~~~YKFyLAfENS~c~DYVTEKl~~~al~~g~VPIv~G~~~~dy~~~~Pp~ 298 (381)
+|+++++||+||+|+++.+... +|...++++||||||||||+|+|||||||| +||.+|+||||+|++..+|++++|||
T Consensus 197 ~L~~~~~vd~yG~c~~~~~~~~-~~~~~~~~~ykF~lafENs~c~dYiTEK~~-~al~~g~VPI~~G~~~~~~~~~~P~~ 274 (349)
T PF00852_consen 197 ELSKYIPVDSYGKCGNNNPCPR-DCKLELLSKYKFYLAFENSNCPDYITEKFW-NALLAGTVPIYWGPPRPNYEEFAPPN 274 (349)
T ss_dssp HHHTTS-EEE-SSTT--SSS---S-HHHHHHTEEEEEEE-SS--TT---HHHH-HHHHTTSEEEEES---TTHHHHS-GG
T ss_pred HHHhhcCeEccCCCCCCCCccc-ccccccccCcEEEEEecCCCCCCCCCHHHH-HHHHCCeEEEEECCEecccccCCCCC
Confidence 9999999999999954433222 344556799999999999999999999999 89999999999997778999999999
Q ss_pred CccccCCCCCHHHHHHHHHHHccCHHHHHHHhhhhccCcccc----cccchHHhHHhhhC-CCCceecchhhhcC
Q psy5439 299 SYIHVDDFPSAKHLAEYLNKLDANDTLYNSYFRWKGTGEFVN----TFFWCRLCAMLHDS-FPIKSYSDINEWWR 368 (381)
Q Consensus 299 SfI~v~dF~S~~eLA~yL~~L~~n~~~Y~~Yf~Wr~~~~~~~----~~~~C~LC~~L~~~-~~~k~y~dl~~Ww~ 368 (381)
||||++||+|+++||+||+.|++|+++|++||+||+++++.. ..++|+||++|++. .+.++|+||.+||.
T Consensus 275 SfI~~~df~s~~~La~yl~~l~~n~~~Y~~yf~Wr~~~~~~~~~~~~~~~C~lC~~l~~~~~~~~~~~~l~~W~~ 349 (349)
T PF00852_consen 275 SFIHVDDFKSPKELADYLKYLDKNDELYNKYFEWRKRYEVKRFDSWSEGFCRLCKKLHENRRKPKVYPDLNDWWW 349 (349)
T ss_dssp GSEEGGGSSSHHHHHHHHHHHHT-HHHHH----------------------------------------------
T ss_pred CccchhcCCCHHHHHHHHHHHhcCHHHHhhhccccccccccccccccccccccccccccccccccccccccccCC
Confidence 999999999999999999999999999999999999998753 36899999999998 67799999999994
|
These enzymes catalyse the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. A classification of glycosyltransferases using nucleotide diphospho-sugar, nucleotide monophospho-sugar and sugar phosphates (2.4.1.- from EC) and related proteins into distinct sequence based families has been described []. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. The same three-dimensional fold is expected to occur within each of the families. Because 3-D structures are better conserved than sequences, several of the families defined on the basis of sequence similarities may have similar 3-D structures and therefore form 'clans'. Glycosyltransferase family 10 GT10 from CAZY comprises enzymes with two known activities; galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) and galactoside 3-fucosyltransferase (2.4.1.152 from EC). The galactoside 3-fucosyltransferases display similarities with the alpha-2 and alpha-6-fucosyltranferases []. The biosynthesis of the carbohydrate antigen sialyl Lewis X (sLe(x)) is dependent on the activity of an galactoside 3-fucosyltransferase. This enzyme catalyses the transfer of fucose from GDP-beta-fucose to the 3-OH of N-acetylglucosamine present in lactosamine acceptors []. Some of the proteins in this group are responsible for the molecular basis of the blood group antigens, surface markers on the outside of the red blood cell membrane. Most of these markers are proteins, but some are carbohydrates attached to lipids or proteins [Reid M.E., Lomas-Francis C. The Blood Group Antigen FactsBook Academic Press, London / San Diego, (1997)]. Galactoside 3(4)-L-fucosyltransferase (2.4.1.65 from EC) belongs to the Lewis blood group system and is associated with Le(a/b) antigen. ; GO: 0008417 fucosyltransferase activity, 0006486 protein glycosylation, 0016020 membrane; PDB: 2NZX_B 2NZW_C 2NZY_C. |
| >KOG2619|consensus | Back alignment and domain information |
|---|
| >PF03016 Exostosin: Exostosin family; InterPro: IPR004263 Hereditary multiple exostoses (EXT) is an autosomal dominant disorder that is characterised by the appearance of multiple outgrowths of the long bones (exostoses) at their epiphyses [] | Back alignment and domain information |
|---|
| >KOG1021|consensus | Back alignment and domain information |
|---|
| >PF13524 Glyco_trans_1_2: Glycosyl transferases group 1 | Back alignment and domain information |
|---|
Homologous Structure Templates
Structure Templates Detected by BLAST 
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST 
Original result of RPS-BLAST against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| Query | 381 | |||
| 2nzw_A | 371 | Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H | 4e-37 |
| >2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* Length = 371 | Back alignment and structure |
|---|
Score = 137 bits (345), Expect = 4e-37
Identities = 37/241 (15%), Positives = 73/241 (30%), Gaps = 14/241 (5%)
Query: 133 FVWALYFLECPYHTQHVAHNDVFNWTATYRSDSDIVTPYEKWVYYDDRHKQMPLDKMKNY 192
++ + + +H ++ + S + P + H +
Sbjct: 119 YLRMPLYYDRLHHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEK---HPNLCAVVNDES 175
Query: 193 AANKTHKVAWFVSNCGAKNNRLQYAHELGKYIEVDIYGSCGSKKCPRISKCFRLLDTKYK 252
K ++ SN A R + L V G K ++YK
Sbjct: 176 DPLKRGFASFVASNPNA-PIRNAFYDALNSIEPVT-GGGSVRNTLGYNVKNKNEFLSQYK 233
Query: 253 FYLAFENSNCVDYITEKLYINGLSHNVLPIVMGARPEDYKKAAPMNSYIHVDDFPSAKHL 312
F L FEN+ Y+TEK+ + + +PI G+ K S+++V DF +
Sbjct: 234 FNLCFENTQGYGYVTEKII-DAYFSHTIPIYWGS--PSVAKDFNPKSFVNVHDFKNFDEA 290
Query: 313 AEYLNKLDANDTLYNSYFRWKGTGEFVNTFFW------CRLCAMLHDSFPIKSYSDINEW 366
+Y+ L + Y ++ ++ A + N +
Sbjct: 291 IDYIKYLHTHKNAYLDMLYENPLNTLDGKAYFYQNLSFKKILAFFKTILENDTIYHDNPF 350
Query: 367 W 367
Sbjct: 351 I 351
|
Structure Templates Detected by HHsearch 
Original result of HHsearch against PDB70 database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 381 | |||
| 2nzw_A | 371 | Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {H | 100.0 | |
| 3qhp_A | 166 | Type 1 capsular polysaccharide biosynthesis prote | 91.96 |
| >2nzw_A Alpha1,3-fucosyltransferase; FUCT, GT 10; 1.90A {Helicobacter pylori} SCOP: c.87.1.11 PDB: 2nzx_A* 2nzy_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-62 Score=492.17 Aligned_cols=272 Identities=17% Similarity=0.186 Sum_probs=206.8
Q ss_pred CCCeEEEEeccCCCCcc----ccCCCCCCCCCCCCcEEEecCCCCCc-----------------------eEEEEecCCC
Q psy5439 91 KNVKKILLFNALTSWNV----KLGSSMFSNCPVNACALTTNKAESPF-----------------------VWALYFLECP 143 (381)
Q Consensus 91 ~~~k~ILlw~~~~~w~~----~~g~~~f~~C~v~~C~iT~dr~~~~~-----------------------~wv~~s~EsP 143 (381)
.+.+.||+|+. .|+. +.|...|..|++.+|.||.||+.+.+ +||++++|||
T Consensus 22 ~k~~~iL~w~~--~wg~~~~~~~~~~~~~~c~~~~C~iT~dr~~~~~aDvVFh~~~~~~~~lp~~R~~~Q~fv~~~~EsP 99 (371)
T 2nzw_A 22 SPPPLKIAVAN--WWGDEEIKEFKNSVLYFILSQRYTITLHQNPNEFSDLVFGNPLGSARKILSYQNAKRVFYTGENESP 99 (371)
T ss_dssp CCCEEEEECCT--TCCHHHHHHHHTSHHHHHHHTTSEEEEECCTTBCCSEEEECCCTHHHHHHHHHCSEEEECCSSSCCC
T ss_pred CCCCEEEEEEC--CCCCCcccccccccccccCCCCeEEeeCCCccccccEEEcCCCcccccCCCCCCCCCEEEEEeecCC
Confidence 46678888874 3442 34666678899999999999986432 8999999999
Q ss_pred cCCCC--------CCc-cccccceeeeccC-------CCccCCccccee--c-cccccCCChhh-------h-ccccccC
Q psy5439 144 YHTQH--------VAH-NDVFNWTATYRSD-------SDIVTPYEKWVY--Y-DDRHKQMPLDK-------M-KNYAANK 196 (381)
Q Consensus 144 ~~~~~--------~~~-~~~FNwTMTYR~D-------SDI~~pYg~~~~--~-~~~~~~~~~~~-------~-~~~~~~K 196 (381)
.++.. ..+ +++||||||||+| |||+.|||.... + ........... + ......|
T Consensus 100 ~~~~~d~~ig~d~~~~~~~~FN~TmtYr~d~~~~~~~SDi~~pYg~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~K 179 (371)
T 2nzw_A 100 NFNLFDYAIGFDELDFNDRYLRMPLYYDRLHHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLK 179 (371)
T ss_dssp CTTTCSEEEESSCCBCGGGEEECCHHHHHHHHHHHHTCBTTCSSCCCTTSGGGSSCCBSCHHHHCHHHHHHHTTSSCTTS
T ss_pred ccccccccccccccccCCCeEEEEEEeeeccccccccCceeccCccccccchhcccccccccccchhhhhhhhccccCCC
Confidence 87652 234 6899999999999 999999995210 0 00000000000 0 1123579
Q ss_pred cceEEEEEeccCCcchHHHHHHHHhcCCeEeEcCCCCCCCCCCchhHHHhhcccceEEEeeccCCCCccchHHHHHhhhc
Q psy5439 197 THKVAWFVSNCGAKNNRLQYAHELGKYIEVDIYGSCGSKKCPRISKCFRLLDTKYKFYLAFENSNCVDYITEKLYINGLS 276 (381)
Q Consensus 197 ~k~vaw~vSnC~~~~~R~~yv~eL~k~i~VD~yG~C~~~~c~~~~~c~~~l~~~YKFyLAfENS~c~DYVTEKl~~~al~ 276 (381)
+++|+||+|||.+ ..|.+|+++|+++++||+||+|+++.|... .|...++++||||||||||+|+|||||||| +||.
T Consensus 180 ~k~v~wvvSnc~~-~~R~~~~~~L~k~i~Vd~~G~c~~~~~~~~-~~~~~~l~~YKFyLafENs~c~dYvTEK~~-~al~ 256 (371)
T 2nzw_A 180 RGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLGYNV-KNKNEFLSQYKFNLCFENTQGYGYVTEKII-DAYF 256 (371)
T ss_dssp SEEEEECCSCCCC-HHHHHHHHHHTTTSCCEECSSTTCCSSSCC-SCHHHHHTTEEEEEEECSSCCTTCCCTHHH-HHHH
T ss_pred ceEEEEEEeCCCc-HHHHHHHHHHhCcCCEeeCCCccCCCCCcc-ccHHHHHhcCcEEEEEeccCCCCcccHHHH-HHHh
Confidence 9999999999987 589999999999999999999998754322 334455699999999999999999999999 8999
Q ss_pred CCcceEEEcCCccccccCCCCCCccccCCCCCHHHHHHHHHHHccCHHHHHHHhhhhccCcccc------cccchHHhHH
Q psy5439 277 HNVLPIVMGARPEDYKKAAPMNSYIHVDDFPSAKHLAEYLNKLDANDTLYNSYFRWKGTGEFVN------TFFWCRLCAM 350 (381)
Q Consensus 277 ~g~VPIv~G~~~~dy~~~~Pp~SfI~v~dF~S~~eLA~yL~~L~~n~~~Y~~Yf~Wr~~~~~~~------~~~~C~LC~~ 350 (381)
+|+||||+|++ ++.+++||+|||+++||+||++||+||+.|++|+++|++||+||....+.. ..++|.||+.
T Consensus 257 ~g~VPI~~G~~--~~~~~~Pp~SfI~~~dF~s~~~La~yL~~L~~n~~~Y~~y~~w~~~~~i~~~~~~y~~~~~c~lc~~ 334 (371)
T 2nzw_A 257 SHTIPIYWGSP--SVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPLNTLDGKAYFYQNLSFKKILAF 334 (371)
T ss_dssp TTCEEEEESCT--TGGGTSCGGGSEEGGGSSSHHHHHHHHHHHHTCHHHHHHHHHSCSSCEETTEECCGGGCCHHHHHHH
T ss_pred CCeEEEEECCC--chhhhCCCCceEEcccCCCHHHHHHHHHHHhcCHHHHHHHHhcCCccccccccccccccchhHHHHH
Confidence 99999999997 678999999999999999999999999999999999999999997653321 2357999987
Q ss_pred hhh---C-CCCceecchhhhcCC
Q psy5439 351 LHD---S-FPIKSYSDINEWWRG 369 (381)
Q Consensus 351 L~~---~-~~~k~y~dl~~Ww~~ 369 (381)
+.. + ...++++++..||.+
T Consensus 335 l~~~~~~~~~~~~~p~~~~~~~~ 357 (371)
T 2nzw_A 335 FKTILENDTIYHDNPFIFCRDLN 357 (371)
T ss_dssp HHHHHHCCBCCSCCC--------
T ss_pred HHHHhcCCceEeecCccccccCC
Confidence 644 2 344678888888766
|
| >3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori} | Back alignment and structure |
|---|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST 
Original result of RPS-BLAST against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
E-value ![]() |
| 381 | ||||
| d2nzwa1 | 349 | c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase Fu | 4e-34 |
| >d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} Length = 349 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: FucT-like domain: Alpha1,3-fucosyltransferase FucT species: Helicobacter pylori [TaxId: 210]
Score = 127 bits (320), Expect = 4e-34
Identities = 43/223 (19%), Positives = 75/223 (33%), Gaps = 9/223 (4%)
Query: 144 YHTQHVAHNDVFNWTATYRSDSDIVTPYEKWVY-YDDRHKQMPLDKMKNYAANKTHKVAW 202
Y H V + TA Y+ + + +K + + ++H + K ++
Sbjct: 126 YDRLHHKAESVNDTTAPYKLKDNSLYALKKPSHCFKEKHPNLCAVVNDESDPLKRGFASF 185
Query: 203 FVSNCGAKNNRLQYAHELGKYIEVDIYGSCGSKKCPRISKCFRLLDTKYKFYLAFENSNC 262
SN A R + L V GS + + L +YKF L FEN+
Sbjct: 186 VASNPNAPI-RNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNEFLS-QYKFNLCFENTQG 243
Query: 263 VDYITEKLYINGLSHNVLPIVMGARPEDYKKAAPMNSYIHVDDFPSAKHLAEYLNKLDAN 322
Y+TEK+ + + +PI G+ K S+++V DF + +Y+ L +
Sbjct: 244 YGYVTEKII-DAYFSHTIPIYWGS--PSVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHTH 300
Query: 323 DTLYNSYFRWKGTGEFVNTFFWCRLCAMLHDSFPIKSYSDINE 365
Y L + + I E
Sbjct: 301 KNAYLDMLYEN---PLNTLDGKAYFYQNLSFKKILAFFKTILE 340
|
Homologous Domains Detected by HHsearch 
Original result of HHsearch against SCOP70(version1.75) database
ID ![]() | Alignment Graph ![]() | Length ![]() |
Definition ![]() |
Probability ![]() |
| Query | 381 | |||
| d2nzwa1 | 349 | Alpha1,3-fucosyltransferase FucT {Helicobacter pyl | 100.0 |
| >d2nzwa1 c.87.1.11 (A:1-349) Alpha1,3-fucosyltransferase FucT {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: UDP-Glycosyltransferase/glycogen phosphorylase superfamily: UDP-Glycosyltransferase/glycogen phosphorylase family: FucT-like domain: Alpha1,3-fucosyltransferase FucT species: Helicobacter pylori [TaxId: 210]
Probab=100.00 E-value=2e-34 Score=284.02 Aligned_cols=138 Identities=22% Similarity=0.289 Sum_probs=125.2
Q ss_pred cccCcceEEEEEeccCCcchHHHHHHHHhcCCeEeEcCCCCCCCCCCchhHHHhhcccceEEEeeccCCCCccchHHHHH
Q psy5439 193 AANKTHKVAWFVSNCGAKNNRLQYAHELGKYIEVDIYGSCGSKKCPRISKCFRLLDTKYKFYLAFENSNCVDYITEKLYI 272 (381)
Q Consensus 193 ~~~K~k~vaw~vSnC~~~~~R~~yv~eL~k~i~VD~yG~C~~~~c~~~~~c~~~l~~~YKFyLAfENS~c~DYVTEKl~~ 272 (381)
...|+++++||+|||.. ..|.+++++|++|.+||++|+|+++.+.....+.+ ++++|||+|||||+.|+||||||+|
T Consensus 176 ~~~K~kFcs~v~Sn~~~-~~R~~~~~~L~k~~~Vd~~G~~~nn~~~~~~~K~~-~l~~ykF~l~~EN~~~~~YvTEKi~- 252 (349)
T d2nzwa1 176 DPLKRGFASFVASNPNA-PIRNAFYDALNSIEPVTGGGSVRNTLGYNVKNKNE-FLSQYKFNLCFENTQGYGYVTEKII- 252 (349)
T ss_dssp CTTSSEEEEECCSCCCC-HHHHHHHHHHTTTSCCEECSSTTCCSSSCCSCHHH-HHTTEEEEEEECSSCCTTCCCTHHH-
T ss_pred ccccCceEEEEEcCCCC-chHHHHHHHHhccCeecccCccccCCCCchhhHHH-HHhCCCeEEEECCcCCCCCcchHHH-
Confidence 35689999999999965 47999999999999999999999987654434444 4599999999999999999999999
Q ss_pred hhhcCCcceEEEcCCccccccCCCCCCccccCCCCCHHHHHHHHHHHccCHHHHHHHhhhhcc
Q psy5439 273 NGLSHNVLPIVMGARPEDYKKAAPMNSYIHVDDFPSAKHLAEYLNKLDANDTLYNSYFRWKGT 335 (381)
Q Consensus 273 ~al~~g~VPIv~G~~~~dy~~~~Pp~SfI~v~dF~S~~eLA~yL~~L~~n~~~Y~~Yf~Wr~~ 335 (381)
+||.+|+||||||++ ++.+++||+|||++.||+|+++||++|+.|++|+++|++|+.|+..
T Consensus 253 da~~~g~iPIy~G~~--~i~~~f~~~sfI~~~df~s~~el~~~i~~l~~n~~~Y~~~~~~~~~ 313 (349)
T d2nzwa1 253 DAYFSHTIPIYWGSP--SVAKDFNPKSFVNVHDFKNFDEAIDYIKYLHTHKNAYLDMLYENPL 313 (349)
T ss_dssp HHHHTTCEEEEESCT--TGGGTSCGGGSEEGGGSSSHHHHHHHHHHHHTCHHHHHHHHHSCSS
T ss_pred HHHhCCeEEEEECCC--cHHHcCCCccEEEhhhCCCHHHHHHHHHHHhcCHHHHHHHHhcccc
Confidence 899999999999996 5789999999999999999999999999999999999999999864
|