Psyllid ID: psy553

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------13
Protein Sequence
MHKSAMQMQMQRAGSVGGASSLSGGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDEPRNRNYVVRFSWWDDLRPLLGASK
Secondary Structure (PSIPRED)
cccccccccccccccccccccccccccccccccccccccccccccHHHHHHccccccccccccccccccccccHHHHHHccccccccccccccccHHHccccccccccccccccEEEccccHHHHHccc
Secondary Structure Prediction (SSPRO)
cccccccccccEcccccccEccEEcccccccEEccccccEEccHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccHHcHcHHHccccccccccccccccccccHHHHHHHccc
Coil and Loop (DISEMBL)
MHKSAMQMQMQRagsvggasslsggleankphqcqqCLKSFSSNHQLVQHIRVhtgekpykctycerRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQldlkdeprnrnyvvrfswwddlrpllgask
Flexible Loop (DISEMBL)
MHKSAMQMQMQRAGSVGGASSLSGGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIqldlkdeprnrnyvvrfswwddlrpllgask
Low Complexity Region (SEG)
MHKSAMQMQMQRagsvggasslsgglEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDEPRNRNYVVRFSWWDDLRPLLGASK
Disordered region (IsUnstruct)
************************************CLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDEPRNRNYVVRFSWWDDLRPLL****
Disordered Region (DISOPRED)
MHKSAMQMQMQRAG************EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDEPRNRNYVVRFSWWDD**PLL****
Disordered Region (DISEMBL)
*******************SSLSGGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDEPRNRNYVVRFSWWDDLRPLLGASK
Disordered Region (DISPRO)
*****MQMQMQRAGSVGGASSLSGGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDEPRNRNYVVRFSWWDDL*P******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MHKSAMQMQMQRAGSVGGASSLSGGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDEPRNRNYVVRFSWWDDLRPLLGASK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	129	2.2.26 [Sep-21-2011]
Q9EQJ4	579	Zinc finger protein 384 O	no	N/A	0.480	0.107	0.515	7e-16
Q8TF68	577	Zinc finger protein 384 O	no	N/A	0.480	0.107	0.515	7e-16
Q5T0B9	420	Zinc finger protein 362 O	no	N/A	0.457	0.140	0.540	2e-15
O75626	825	PR domain zinc finger pro	no	N/A	0.550	0.086	0.478	8e-15
Q96NI8	536	Zinc finger protein 570 O	no	N/A	0.480	0.115	0.492	2e-14
Q3V080	568	Zinc finger protein 583 O	no	N/A	0.503	0.114	0.492	5e-14
Q96ND8	569	Zinc finger protein 583 O	no	N/A	0.503	0.114	0.492	6e-14
Q5TEC3	545	Zinc finger protein 697 O	no	N/A	0.558	0.132	0.444	7e-14
Q569E7	569	Zinc finger protein 697 O	no	N/A	0.558	0.126	0.458	7e-14
Q6ECI4	717	Zinc finger protein 470 O	no	N/A	0.496	0.089	0.523	7e-14

>sp|Q9EQJ4|ZN384_RAT Zinc finger protein 384 OS=Rattus norvegicus GN=Znf384 PE=1 SV=1

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 47/64 (73%)

Query: 27  EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG 86
           E  KPH+C  C K+F++   L QH+R+H+G KPY C+YC++ F+QLSH+QQHTR+HT + 
Sbjct: 313 ETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDR 372

Query: 87  VNSC 90
              C
Sbjct: 373 PYKC 376

Transcription factor that binds the consensus DNA sequence [GC]AAAAA. Seems to bind and regulate the promoters of MMP1, MMP3, MMP7 and COL1A1.
Rattus norvegicus (taxid: 10116)

>sp|Q8TF68|ZN384_HUMAN Zinc finger protein 384 OS=Homo sapiens GN=ZNF384 PE=1 SV=2

 Score = 82.4 bits (202), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 33/64 (51%), Positives = 47/64 (73%)

Query: 27  EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG 86
           E  KPH+C  C K+F++   L QH+R+H+G KPY C+YC++ F+QLSH+QQHTR+HT + 
Sbjct: 312 ETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDR 371

Query: 87  VNSC 90
              C
Sbjct: 372 PYKC 375

Transcription factor that binds the consensus DNA sequence [GC]AAAAA. Seems to bind and regulate the promoters of MMP1, MMP3, MMP7 and COL1A1.

Homo sapiens (taxid: 9606)

>sp|Q5T0B9|ZN362_HUMAN Zinc finger protein 362 OS=Homo sapiens GN=ZNF362 PE=1 SV=1

 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 33/61 (54%), Positives = 45/61 (73%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
           KPH+C  C KSF++   L QH+R+H G KPY C+YC++ F+QLSH+QQHTR+HT +    
Sbjct: 253 KPHKCPHCSKSFANASYLAQHLRIHLGVKPYHCSYCDKSFRQLSHLQQHTRIHTGDRPYK 312

Query: 90  C 90
           C
Sbjct: 313 C 313

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|O75626|PRDM1_HUMAN PR domain zinc finger protein 1 OS=Homo sapiens GN=PRDM1 PE=1 SV=2

 Score = 79.0 bits (193), Expect = 8e-15,   Method: Composition-based stats.
 Identities = 34/71 (47%), Positives = 44/71 (61%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
           KPH+CQ C K FSS   L  H+R+H+GEKPY+C  C  +F Q  H++ H RLHT E  + 
Sbjct: 629 KPHECQVCHKRFSSTSNLKTHLRLHSGEKPYQCKVCPAKFTQFVHLKLHKRLHTRERPHK 688

Query: 90  CLQILSLWIQL 100
           C Q    +I L
Sbjct: 689 CSQCHKNYIHL 699

Transcriptional repressor that binds specifically to the PRDI element in the promoter of the beta-interferon gene. Drives the maturation of B-lymphocytes into Ig secreting cells.

Homo sapiens (taxid: 9606)

>sp|Q96NI8|ZN570_HUMAN Zinc finger protein 570 OS=Homo sapiens GN=ZNF570 PE=2 SV=1

 Score = 77.4 bits (189), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 46/65 (70%)

Query: 28  ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV 87
             KP++C++C K+FS N  LVQH+RVHTGEKPY+C  C + F Q +++ QH R+HT E  
Sbjct: 270 GEKPYECKECRKAFSQNAHLVQHLRVHTGEKPYECKVCRKAFSQFAYLAQHQRVHTGEKP 329

Query: 88  NSCLQ 92
             C++
Sbjct: 330 YECIE 334

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q3V080|ZN583_MOUSE Zinc finger protein 583 OS=Mus musculus GN=Znf583 PE=2 SV=1

 Score = 76.3 bits (186), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 46/65 (70%)

Query: 28  ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV 87
             KP++C++C K+FS N  L QH RVHTGEKPY+C  C++ F Q++H+ QH R+HT E  
Sbjct: 263 GEKPYECKECRKAFSQNAHLAQHQRVHTGEKPYQCKECKKAFSQIAHLTQHQRIHTGERP 322

Query: 88  NSCLQ 92
             C++
Sbjct: 323 FECIE 327

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q96ND8|ZN583_HUMAN Zinc finger protein 583 OS=Homo sapiens GN=ZNF583 PE=2 SV=2

 Score = 75.9 bits (185), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 32/65 (49%), Positives = 46/65 (70%)

Query: 28  ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV 87
             KP++C++C K+FS N  L QH RVHTGEKPY+C  C++ F Q++H+ QH R+HT E  
Sbjct: 264 GEKPYECKECRKAFSQNAHLAQHQRVHTGEKPYQCKECKKAFSQIAHLTQHQRVHTGERP 323

Query: 88  NSCLQ 92
             C++
Sbjct: 324 FECIE 328

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5TEC3|ZN697_HUMAN Zinc finger protein 697 OS=Homo sapiens GN=ZNF697 PE=2 SV=2

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 45/72 (62%)

Query: 28  ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV 87
             +P+ C++C K F  N  LV H+RVHTGEKP++C  CE+RF   S + QH R HT E  
Sbjct: 433 GERPYVCRECGKGFGRNSHLVNHLRVHTGEKPFRCGQCEKRFSDFSTLTQHQRTHTGEKP 492

Query: 88  NSCLQILSLWIQ 99
            +C++    +IQ
Sbjct: 493 YTCIECGKSFIQ 504

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q569E7|ZN697_MOUSE Zinc finger protein 697 OS=Mus musculus GN=Znf697 PE=2 SV=1

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 33/72 (45%), Positives = 44/72 (61%)

Query: 28  ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV 87
             +P+ C++C K F  N  LV H+RVHTGEKP+ C  CE+RF   S + QH R HT E  
Sbjct: 457 GERPYVCRECGKGFGRNSHLVNHLRVHTGEKPFGCGQCEKRFSDFSTLTQHQRTHTGEKP 516

Query: 88  NSCLQILSLWIQ 99
            +CL+    +IQ
Sbjct: 517 YTCLECGKSFIQ 528

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q6ECI4|ZN470_HUMAN Zinc finger protein 470 OS=Homo sapiens GN=ZNF470 PE=2 SV=3

 Score = 75.9 bits (185), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 34/65 (52%), Positives = 44/65 (67%)

Query: 28  ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV 87
             KP +C +C K+FS N  LVQH RVHTGEKPY+C  C + F QL+H+ QH R+HT E  
Sbjct: 280 GEKPFECTECGKAFSQNAHLVQHQRVHTGEKPYQCKQCNKAFSQLAHLAQHQRVHTGEKP 339

Query: 88  NSCLQ 92
             C++
Sbjct: 340 YECIE 344

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
195450793	1054	GK13709 [Drosophila willistoni] gi|19416	0.697	0.085	0.707	6e-30
195469345	1091	GE14516 [Drosophila yakuba] gi|194185699	0.697	0.082	0.68	7e-29
194913584	1094	GG16450 [Drosophila erecta] gi|190647947	0.697	0.082	0.67	2e-28
383854838	909	PREDICTED: uncharacterized protein LOC10	0.697	0.099	0.612	2e-28
16182614	1097	GH06573p [Drosophila melanogaster]	0.697	0.082	0.67	2e-28
195354373	1094	GM26782 [Drosophila sechellia] gi|194128	0.697	0.082	0.67	2e-28
45552147	1150	Lin29, isoform A [Drosophila melanogaste	0.697	0.078	0.67	2e-28
45551181	1140	Lin29, isoform B [Drosophila melanogaste	0.697	0.078	0.67	2e-28
198462291	1014	GA22510 [Drosophila pseudoobscura pseudo	0.658	0.083	0.705	3e-28
195402325	1062	GJ18239 [Drosophila virilis] gi|19415597	0.697	0.084	0.67	3e-28

>gi|195450793|ref|XP_002072635.1| GK13709 [Drosophila willistoni] gi|194168720|gb|EDW83621.1| GK13709 [Drosophila willistoni]

 Score =  135 bits (340), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 70/99 (70%), Positives = 75/99 (75%), Gaps = 9/99 (9%)

Query: 1   MHKSAMQM---QMQRAG----SVGGASSLSGGLEA--NKPHQCQQCLKSFSSNHQLVQHI 51
           MHKSAMQ    Q+ R G     V GA+SL GG      KPHQCQQC+KSFSSNHQLVQHI
Sbjct: 333 MHKSAMQQIQQQIPRVGLGTHGVPGATSLGGGTPGADTKPHQCQQCMKSFSSNHQLVQHI 392

Query: 52  RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
           RVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E    C
Sbjct: 393 RVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKC 431

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195469345|ref|XP_002099598.1| GE14516 [Drosophila yakuba] gi|194185699|gb|EDW99310.1| GE14516 [Drosophila yakuba]

 Score =  131 bits (330), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 68/100 (68%), Positives = 76/100 (76%), Gaps = 10/100 (10%)

Query: 1   MHKSAMQM---QMQRAG----SVGGASSLSGGLEAN---KPHQCQQCLKSFSSNHQLVQH 50
           MHKSAMQ    Q+ R G     V G++SL G +  +   KPHQCQQC+KSFSSNHQLVQH
Sbjct: 344 MHKSAMQQIQQQIPRVGLGTHGVTGSASLGGSITPSSDTKPHQCQQCMKSFSSNHQLVQH 403

Query: 51  IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
           IRVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E    C
Sbjct: 404 IRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKC 443

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194913584|ref|XP_001982731.1| GG16450 [Drosophila erecta] gi|190647947|gb|EDV45250.1| GG16450 [Drosophila erecta]

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 76/100 (76%), Gaps = 10/100 (10%)

Query: 1   MHKSAMQM---QMQRAG----SVGGASSLSGGLEAN---KPHQCQQCLKSFSSNHQLVQH 50
           MHKSAMQ    Q+ R G     V G+++L G +  +   KPHQCQQC+KSFSSNHQLVQH
Sbjct: 344 MHKSAMQQIQQQIPRVGLATHGVTGSANLGGSITPSSDSKPHQCQQCMKSFSSNHQLVQH 403

Query: 51  IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
           IRVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E    C
Sbjct: 404 IRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKC 443

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383854838|ref|XP_003702927.1| PREDICTED: uncharacterized protein LOC100877920 [Megachile rotundata]

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 68/111 (61%), Positives = 76/111 (68%), Gaps = 21/111 (18%)

Query: 1   MHKSAMQMQMQRAGSVGGASS-----LSGGLEA----------------NKPHQCQQCLK 39
           MHKSAMQM  +  G+ G  ++     ++GGL A                 KPHQCQQCLK
Sbjct: 550 MHKSAMQMHARELGAAGALTARASGGMAGGLAALAPIGVGPGGMIAGNEVKPHQCQQCLK 609

Query: 40  SFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
           SFSSNHQLVQHIRVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E    C
Sbjct: 610 SFSSNHQLVQHIRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKC 660

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|16182614|gb|AAL13533.1| GH06573p [Drosophila melanogaster]

 Score =  130 bits (327), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 76/100 (76%), Gaps = 10/100 (10%)

Query: 1   MHKSAMQM---QMQRAG----SVGGASSLSGGLEAN---KPHQCQQCLKSFSSNHQLVQH 50
           MHKSAMQ    Q+ R G     V G+++L G +  +   KPHQCQQC+KSFSSNHQLVQH
Sbjct: 345 MHKSAMQQIQQQIPRVGLGTHGVTGSANLGGSITPSSDTKPHQCQQCMKSFSSNHQLVQH 404

Query: 51  IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
           IRVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E    C
Sbjct: 405 IRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKC 444

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195354373|ref|XP_002043672.1| GM26782 [Drosophila sechellia] gi|194128860|gb|EDW50903.1| GM26782 [Drosophila sechellia]

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 76/100 (76%), Gaps = 10/100 (10%)

Query: 1   MHKSAMQM---QMQRAG----SVGGASSLSGGLEAN---KPHQCQQCLKSFSSNHQLVQH 50
           MHKSAMQ    Q+ R G     V G+++L G +  +   KPHQCQQC+KSFSSNHQLVQH
Sbjct: 342 MHKSAMQQIQQQIPRVGLGTQGVTGSANLGGSITPSSDTKPHQCQQCMKSFSSNHQLVQH 401

Query: 51  IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
           IRVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E    C
Sbjct: 402 IRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKC 441

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|45552147|ref|NP_995596.1| Lin29, isoform A [Drosophila melanogaster] gi|386763441|ref|NP_001245421.1| Lin29, isoform C [Drosophila melanogaster] gi|45444816|gb|AAS64609.1| Lin29, isoform A [Drosophila melanogaster] gi|237681233|gb|ACR10183.1| GH02610p [Drosophila melanogaster] gi|383293089|gb|AFH06781.1| Lin29, isoform C [Drosophila melanogaster]

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 76/100 (76%), Gaps = 10/100 (10%)

Query: 1   MHKSAMQM---QMQRAG----SVGGASSLSGGLEAN---KPHQCQQCLKSFSSNHQLVQH 50
           MHKSAMQ    Q+ R G     V G+++L G +  +   KPHQCQQC+KSFSSNHQLVQH
Sbjct: 398 MHKSAMQQIQQQIPRVGLGTHGVTGSANLGGSITPSSDTKPHQCQQCMKSFSSNHQLVQH 457

Query: 51  IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
           IRVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E    C
Sbjct: 458 IRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKC 497

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|45551181|ref|NP_726568.2| Lin29, isoform B [Drosophila melanogaster] gi|45444815|gb|AAF59348.3| Lin29, isoform B [Drosophila melanogaster]

 Score =  130 bits (326), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 76/100 (76%), Gaps = 10/100 (10%)

Query: 1   MHKSAMQM---QMQRAG----SVGGASSLSGGLEAN---KPHQCQQCLKSFSSNHQLVQH 50
           MHKSAMQ    Q+ R G     V G+++L G +  +   KPHQCQQC+KSFSSNHQLVQH
Sbjct: 398 MHKSAMQQIQQQIPRVGLGTHGVTGSANLGGSITPSSDTKPHQCQQCMKSFSSNHQLVQH 457

Query: 51  IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
           IRVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E    C
Sbjct: 458 IRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKC 497

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198462291|ref|XP_002132195.1| GA22510 [Drosophila pseudoobscura pseudoobscura] gi|198140045|gb|EDY70905.1| GA22510 [Drosophila pseudoobscura pseudoobscura]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/95 (70%), Positives = 71/95 (74%), Gaps = 10/95 (10%)

Query: 1   MHKSAMQM---QMQRAG----SVGGASSLSGGLEA---NKPHQCQQCLKSFSSNHQLVQH 50
           MHKSAMQ    Q+ R G     V G  SL G        KPHQCQQC+KSFSSNHQLVQH
Sbjct: 266 MHKSAMQQIQQQIPRVGLATHGVTGTPSLGGNATPGTDTKPHQCQQCMKSFSSNHQLVQH 325

Query: 51  IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           IRVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E
Sbjct: 326 IRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGE 360

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195402325|ref|XP_002059757.1| GJ18239 [Drosophila virilis] gi|194155971|gb|EDW71155.1| GJ18239 [Drosophila virilis] gi|263359667|gb|ACY70503.1| hypothetical protein DVIR88_6g0040 [Drosophila virilis]

 Score =  129 bits (325), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 67/100 (67%), Positives = 73/100 (73%), Gaps = 10/100 (10%)

Query: 1   MHKSAMQM---QMQRAG----SVGGASSLSGGLEA---NKPHQCQQCLKSFSSNHQLVQH 50
           MHKSAMQ    Q+ R G     V G +S+  G       KPHQCQQC+KSFSSNHQLVQH
Sbjct: 314 MHKSAMQQIQQQIPRVGLGAHGVPGTASMGSGTTPGAETKPHQCQQCMKSFSSNHQLVQH 373

Query: 51  IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
           IRVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E    C
Sbjct: 374 IRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKC 413

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	129
FB|FBgn0262636	1150	Lin29 [Drosophila melanogaster	0.689	0.077	0.633	2.3e-26
ZFIN|ZDB-GENE-061103-547	448	znf362 "zinc finger protein 36	0.627	0.180	0.476	1.6e-17
UNIPROTKB|Q5ZM27	476	ZNF384 "Uncharacterized protei	0.472	0.128	0.557	4.1e-17
ZFIN|ZDB-GENE-030131-2855	511	si:ch211-154o6.2 "si:ch211-154	0.480	0.121	0.548	6.2e-17
ZFIN|ZDB-GENE-070424-35	438	zgc:162623 "zgc:162623" [Danio	0.488	0.143	0.555	8.8e-17
UNIPROTKB|F8W6Q3	500	ZNF384 "Zinc finger protein 38	0.472	0.122	0.540	1.3e-16
UNIPROTKB|F1SL43	573	ZNF384 "Uncharacterized protei	0.496	0.111	0.515	1.3e-16
UNIPROTKB|F1PI62	575	ZNF384 "Uncharacterized protei	0.496	0.111	0.515	1.3e-16
UNIPROTKB|Q8TF68	577	ZNF384 "Zinc finger protein 38	0.496	0.110	0.515	1.3e-16
RGD|708346	579	Zfp384 "zinc finger protein 38	0.496	0.110	0.515	1.3e-16

FB|FBgn0262636 Lin29 [Drosophila melanogaster (taxid:7227)]

 Score = 310 (114.2 bits), Expect = 2.3e-26, P = 2.3e-26
 Identities = 64/101 (63%), Positives = 69/101 (68%)

Query:     1 MHKSAMQMQMQRXXXXXXXXXXXXXXEAN-----------KPHQCQQCLKSFSSNHQLVQ 49
             MHKSAMQ Q+Q+               AN           KPHQCQQC+KSFSSNHQLVQ
Sbjct:   398 MHKSAMQ-QIQQQIPRVGLGTHGVTGSANLGGSITPSSDTKPHQCQQCMKSFSSNHQLVQ 456

Query:    50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
             HIRVHTGEKPYKC+YC+RRFKQLSHVQQHTRLHT E    C
Sbjct:   457 HIRVHTGEKPYKCSYCDRRFKQLSHVQQHTRLHTGERPYKC 497

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-061103-547 znf362 "zinc finger protein 362" [Danio rerio (taxid:7955)]

 Score = 220 (82.5 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 40/84 (47%), Positives = 56/84 (66%)

Query:    30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
             KPH+C  C K+F++   L QH+R+H G KPY C+YCE+ F+QLSH+QQHTR+HT +    
Sbjct:   281 KPHKCPHCTKTFANASYLAQHLRIHLGVKPYHCSYCEKSFRQLSHLQQHTRIHTGDRPYK 340

Query:    90 CLQ--ILSLWIQL-DLKDEPRNRN 110
             CLQ      + QL +L+   R+ N
Sbjct:   341 CLQPGCEKAFTQLSNLQSHQRSHN 364

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|Q5ZM27 ZNF384 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 217 (81.4 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 34/61 (55%), Positives = 47/61 (77%)

Query:    30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
             KPH+C  C KSF+++  L QHIR+H+G KPY C+YC++ F+QLSH+QQHTR+HT +    
Sbjct:   256 KPHKCPHCSKSFANSSYLAQHIRIHSGAKPYTCSYCQKAFRQLSHLQQHTRIHTGDRPYK 315

Query:    90 C 90
             C
Sbjct:   316 C 316

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

ZFIN|ZDB-GENE-030131-2855 si:ch211-154o6.2 "si:ch211-154o6.2" [Danio rerio (taxid:7955)]

 Score = 216 (81.1 bits), Expect = 6.2e-17, P = 6.2e-17
 Identities = 34/62 (54%), Positives = 46/62 (74%)

Query:    29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVN 88
             +KPH+C  C KSF+++  L QH+R+HTG KPY C YCE+ F+QLSH+QQH R+HT +   
Sbjct:   275 SKPHKCPHCTKSFANSSYLAQHVRIHTGVKPYTCNYCEKTFRQLSHLQQHHRIHTGDRPY 334

Query:    89 SC 90
              C
Sbjct:   335 KC 336

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008150 "biological_process" evidence=ND

ZFIN|ZDB-GENE-070424-35 zgc:162623 "zgc:162623" [Danio rerio (taxid:7955)]

 Score = 213 (80.0 bits), Expect = 8.8e-17, P = 8.8e-17
 Identities = 35/63 (55%), Positives = 45/63 (71%)

Query:    30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
             KPH+C  C KSF++   L QH+R+H G KPY C+YCE  F+QLSH+QQHTR+HT +    
Sbjct:   271 KPHKCPHCSKSFANASYLAQHLRIHLGIKPYHCSYCENSFRQLSHLQQHTRIHTGDRPYK 330

Query:    90 CLQ 92
             C Q
Sbjct:   331 CAQ 333

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

UNIPROTKB|F8W6Q3 ZNF384 "Zinc finger protein 384" [Homo sapiens (taxid:9606)]

 Score = 213 (80.0 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 33/61 (54%), Positives = 46/61 (75%)

Query:    30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
             KPH+C  C K+F+++  L QHIR+H+G KPY C +CE+ F+QLSH+QQHTR+HT +    
Sbjct:   238 KPHKCPHCSKTFANSSYLAQHIRIHSGAKPYSCNFCEKSFRQLSHLQQHTRIHTGDRPYK 297

Query:    90 C 90
             C
Sbjct:   298 C 298

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F1SL43 ZNF384 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 214 (80.4 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 33/64 (51%), Positives = 47/64 (73%)

Query:    27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG 86
             E  KPH+C  C K+F++   L QH+R+H+G KPY C+YC++ F+QLSH+QQHTR+HT + 
Sbjct:   318 ETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDR 377

Query:    87 VNSC 90
                C
Sbjct:   378 PYKC 381

GO:0005634 "nucleus" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1PI62 ZNF384 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 214 (80.4 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 33/64 (51%), Positives = 47/64 (73%)

Query:    27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG 86
             E  KPH+C  C K+F++   L QH+R+H+G KPY C+YC++ F+QLSH+QQHTR+HT + 
Sbjct:   312 ETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDR 371

Query:    87 VNSC 90
                C
Sbjct:   372 PYKC 375

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q8TF68 ZNF384 "Zinc finger protein 384" [Homo sapiens (taxid:9606)]

 Score = 214 (80.4 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 33/64 (51%), Positives = 47/64 (73%)

Query:    27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG 86
             E  KPH+C  C K+F++   L QH+R+H+G KPY C+YC++ F+QLSH+QQHTR+HT + 
Sbjct:   312 ETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDR 371

Query:    87 VNSC 90
                C
Sbjct:   372 PYKC 375

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005925 "focal adhesion" evidence=IEA

GO:0006913 "nucleocytoplasmic transport" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IEA

GO:0050714 "positive regulation of protein secretion" evidence=IEA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

RGD|708346 Zfp384 "zinc finger protein 384" [Rattus norvegicus (taxid:10116)]

 Score = 214 (80.4 bits), Expect = 1.3e-16, P = 1.3e-16
 Identities = 33/64 (51%), Positives = 47/64 (73%)

Query:    27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG 86
             E  KPH+C  C K+F++   L QH+R+H+G KPY C+YC++ F+QLSH+QQHTR+HT + 
Sbjct:   313 ETIKPHKCPHCSKTFANTSYLAQHLRIHSGAKPYNCSYCQKAFRQLSHLQQHTRIHTGDR 372

Query:    87 VNSC 90
                C
Sbjct:   373 PYKC 376

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005925 "focal adhesion" evidence=IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006913 "nucleocytoplasmic transport" evidence=IMP

GO:0008270 "zinc ion binding" evidence=IEA

GO:0017124 "SH3 domain binding" evidence=IMP

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0045944 "positive regulation of transcription from RNA polymerase II promoter" evidence=IDA

GO:0050714 "positive regulation of protein secretion" evidence=IDA

GO:0005730 "nucleolus" evidence=ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	129
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	3e-06
PHA00733	128	PHA00733, PHA00733, hypothetical protein	7e-04

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 40.8 bits (96), Expect = 3e-06
 Identities = 14/25 (56%), Positives = 17/25 (68%)

Query: 47 LVQHIRVHTGEKPYKCTYCERRFKQ 71
          L +H+R HTGEKPYKC  C + F  
Sbjct: 2  LRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

>gnl|CDD|177301 PHA00733, PHA00733, hypothetical protein

 Score = 36.8 bits (85), Expect = 7e-04
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 6/54 (11%)

Query: 26  LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQ----LSHV 75
            +A  P+ C  CL  FSS+  L QHIR     K   C  C + F+     L HV
Sbjct: 68  SKAVSPYVCPLCLMPFSSSVSLKQHIRYTEHSK--VCPVCGKEFRNTDSTLDHV 119

Length = 128

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	129
KOG2462|consensus	279		99.81
KOG2462|consensus	279		99.78
KOG3623|consensus	1007		99.65
KOG3576|consensus	267		99.59
KOG3623|consensus	1007		99.42
KOG3608|consensus	467		99.11
PHA00733	128	hypothetical protein	99.02
KOG3576|consensus	267		99.0
KOG3608|consensus	467		98.96
PHA02768	55	hypothetical protein; Provisional	98.93
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.89
KOG1074|consensus	958		98.89
PHA02768	55	hypothetical protein; Provisional	98.84
KOG1074|consensus	958		98.78
PLN03086	567	PRLI-interacting factor K; Provisional	98.64
PLN03086	567	PRLI-interacting factor K; Provisional	98.56
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.44
PHA00733	128	hypothetical protein	98.36
PHA00616	44	hypothetical protein	98.33
PHA00616	44	hypothetical protein	98.3
PHA00732	79	hypothetical protein	98.13
PHA00732	79	hypothetical protein	97.95
KOG3993|consensus	500		97.86
KOG3993|consensus	500		97.86
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.57
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.55
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.41
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.41
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.21
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.09
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	96.96
PRK04860	160	hypothetical protein; Provisional	96.94
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.91
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	96.88
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.57
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.57
smart00355	26	ZnF_C2H2 zinc finger.	96.31
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.18
smart00355	26	ZnF_C2H2 zinc finger.	96.13
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	95.98
PRK04860	160	hypothetical protein; Provisional	95.66
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.19
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.17
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	94.89
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	94.31
KOG2231|consensus	669		92.79
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.16
COG5236	493	Uncharacterized conserved protein, contains RING Z	91.96
COG5048	467	FOG: Zn-finger [General function prediction only]	91.72
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	91.64
COG5236	493	Uncharacterized conserved protein, contains RING Z	89.35
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	88.3
COG1592	166	Rubrerythrin [Energy production and conversion]	87.34
COG5048	467	FOG: Zn-finger [General function prediction only]	86.47
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	86.06
KOG2186|consensus	276		85.99
KOG2893|consensus	341		84.67
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	84.55
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	83.83
COG4049	65	Uncharacterized protein containing archaeal-type C	82.22
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	81.05
KOG2186|consensus	276		80.45
KOG1146|consensus	1406		80.16
KOG2893|consensus	341		80.01

>KOG2462|consensus

Probab=99.81  E-value=7.1e-21  Score=128.83  Aligned_cols=75  Identities=32%  Similarity=0.596  Sum_probs=39.4

Q ss_pred             CcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                      ++.|.+||+.|...=.|+.|+|+|+|++||.|..|++.|.+.++|..||+||++.|+|.|..|+|+|...+ |.+|
T Consensus       187 ~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH  262 (279)
T KOG2462|consen  187 PCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKH  262 (279)
T ss_pred             CcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHh
Confidence            34455555555544455555555555555555555555555555555555555555555555555555554 4444

>KOG2462|consensus

Probab=99.78  E-value=2.3e-20  Score=126.40  Aligned_cols=96  Identities=27%  Similarity=0.380  Sum_probs=78.5

Q ss_pred             CCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      +.+.+.|+.|++.|.....|..|+++|+  -+.+|.+||+.|...=.|+.|+++|+|||||.|..|+|.|+.++ |+.|+
T Consensus       158 s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHm  235 (279)
T KOG2462|consen  158 SKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHM  235 (279)
T ss_pred             ccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHH
Confidence            3566788888888888888888888887  57899999999999999999999999999999999999999996 88774


Q ss_pred             ----CCCCeeE-----eeccccccchhh
Q psy553          107 ----RNRNYVV-----RFSWWDDLRPLL  125 (129)
Q Consensus       107 ----~~~~~~~-----~~~~~~~l~~~~  125 (129)
                          ..++|.|     .|+-.+=|.+|.
T Consensus       236 QTHS~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  236 QTHSDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             HhhcCCccccCcchhhHHHHHHHHHHhh
Confidence                3667764     566666666653

>KOG3623|consensus

Probab=99.65  E-value=7.2e-17  Score=121.24  Aligned_cols=81  Identities=28%  Similarity=0.588  Sum_probs=76.5

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                      .+...|.|..|.+.|...+.|.+|...|+|.+||+|.+|.+.|....+|..|+++|+|||||.|..|+|.|.++. .-.|
T Consensus       890 te~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQH  969 (1007)
T KOG3623|consen  890 TEDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQH  969 (1007)
T ss_pred             CccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhh
Confidence            345689999999999999999999999999999999999999999999999999999999999999999999995 8888


Q ss_pred             CC
Q psy553          106 PR  107 (129)
Q Consensus       106 ~~  107 (129)
                      |.
T Consensus       970 MN  971 (1007)
T KOG3623|consen  970 MN  971 (1007)
T ss_pred             hc
Confidence            83

>KOG3576|consensus

Probab=99.59  E-value=2.2e-16  Score=103.12  Aligned_cols=77  Identities=26%  Similarity=0.489  Sum_probs=72.9

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhcc-ccCcC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQL-DLKDE  105 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~-~l~~h  105 (129)
                      ...|.|.+|++.|.....|.+|+..|...+.+.|..||+.|...-.|.+|+++|+|.+||+|..|++.|.++ +|..|
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            567999999999999999999999999999999999999999999999999999999999999999999998 57766

>KOG3623|consensus

Probab=99.42  E-value=8.2e-14  Score=105.13  Aligned_cols=81  Identities=23%  Similarity=0.485  Sum_probs=69.5

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCC-------------CceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhh
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE-------------KPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSL   96 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~-------------~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~   96 (129)
                      ..|.|..|...|..+..|-+||..|...             +-|+|..|++.|.+..+|..|+++|+|||||.|+.|.|.
T Consensus       239 ~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKR  318 (1007)
T KOG3623|consen  239 PNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKR  318 (1007)
T ss_pred             CCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccc
Confidence            4578999999999999999999887532             458999999999999999999999999999999999999


Q ss_pred             hhccc-cCcCCCCCC
Q psy553           97 WIQLD-LKDEPRNRN  110 (129)
Q Consensus        97 f~~~~-l~~h~~~~~  110 (129)
                      |.++. .-.||..+.
T Consensus       319 FSHSGSySSHmSSKK  333 (1007)
T KOG3623|consen  319 FSHSGSYSSHMSSKK  333 (1007)
T ss_pred             cccCCcccccccccc
Confidence            99984 888876554

>KOG3608|consensus

Probab=99.11  E-value=1.9e-11  Score=86.06  Aligned_cols=84  Identities=24%  Similarity=0.459  Sum_probs=64.6

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhh-hhcCCCccchhhhhhhhhccc-cCcC--
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTR-LHTVEGVNSCLQILSLWIQLD-LKDE--  105 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~-~h~~~~~y~C~~C~~~f~~~~-l~~h--  105 (129)
                      ++|.|..|.+.|.+...|..|++.|.  +-|+|++|..+....+.|..|++ .|+..|||+|..|++.|.+.+ |.+|  
T Consensus       236 n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~  313 (467)
T KOG3608|consen  236 NSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQ  313 (467)
T ss_pred             CchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHH
Confidence            57888888888888888888888776  34788888888888888888877 456778888888888888874 7777  


Q ss_pred             -CCCCCeeEee
Q psy553          106 -PRNRNYVVRF  115 (129)
Q Consensus       106 -~~~~~~~~~~  115 (129)
                       +.+..|.|.+
T Consensus       314 ~HS~~~y~C~h  324 (467)
T KOG3608|consen  314 VHSKTVYQCEH  324 (467)
T ss_pred             hccccceecCC
Confidence             4466666644

>PHA00733 hypothetical protein

Probab=99.02  E-value=2.5e-11  Score=75.57  Aligned_cols=83  Identities=17%  Similarity=0.215  Sum_probs=67.0

Q ss_pred             CCCCcccccchhhccChHHHHHH--Hh---hcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQH--IR---VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-  101 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h--~~---~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-  101 (129)
                      +++++.|.+|.+.|.....|..+  ..   .+.+.+||.|..|++.|.....|..|++.+  +.+|.|.+|++.|...+ 
T Consensus        37 ~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~s  114 (128)
T PHA00733         37 EQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDS  114 (128)
T ss_pred             hhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHH
Confidence            36789999999888887777655  11   233478999999999999999999999976  46799999999999996 


Q ss_pred             cCcCCCCCCee
Q psy553          102 LKDEPRNRNYV  112 (129)
Q Consensus       102 l~~h~~~~~~~  112 (129)
                      |..|..+++-.
T Consensus       115 L~~H~~~~h~~  125 (128)
T PHA00733        115 TLDHVCKKHNI  125 (128)
T ss_pred             HHHHHHHhcCc
Confidence            98887665543

>KOG3576|consensus

Probab=99.00  E-value=3.2e-11  Score=79.16  Aligned_cols=73  Identities=30%  Similarity=0.547  Sum_probs=64.3

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhc-----------CCCccchhhhhhhh
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT-----------VEGVNSCLQILSLW   97 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~-----------~~~~y~C~~C~~~f   97 (129)
                      .+.|.|..||++|..-..|.+|+++|+|.+||+|..|++.|.+.-+|..|.+.-.           +++-|+|..||.+-
T Consensus       143 vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~  222 (267)
T KOG3576|consen  143 VKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTS  222 (267)
T ss_pred             HHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCC
Confidence            3678999999999999999999999999999999999999999999998876432           35779999999887


Q ss_pred             hccc
Q psy553           98 IQLD  101 (129)
Q Consensus        98 ~~~~  101 (129)
                      ...+
T Consensus       223 ~~~e  226 (267)
T KOG3576|consen  223 ERPE  226 (267)
T ss_pred             CChh
Confidence            7764

>KOG3608|consensus

Probab=98.96  E-value=1.5e-10  Score=81.60  Aligned_cols=95  Identities=25%  Similarity=0.416  Sum_probs=75.0

Q ss_pred             CCcccccchhhccChHHHHHHHhh-cCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh--hhhhhhccc-cCcC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRV-HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ--ILSLWIQLD-LKDE  105 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~--C~~~f~~~~-l~~h  105 (129)
                      +-|+|+.|.++....+.|..|++. |..++||+|..|..+|...+.|++|..+|+ +..|.|+.  |...|.+.. +.+|
T Consensus       262 n~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H  340 (467)
T KOG3608|consen  262 NCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRH  340 (467)
T ss_pred             hcccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHH
Confidence            458899999999999999999875 888899999999999999999999999887 66788887  888888873 7666


Q ss_pred             CCCC-------CeeE-----eeccccccchhh
Q psy553          106 PRNR-------NYVV-----RFSWWDDLRPLL  125 (129)
Q Consensus       106 ~~~~-------~~~~-----~~~~~~~l~~~~  125 (129)
                      +++.       .|+|     .|....+|..|+
T Consensus       341 ~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL  372 (467)
T KOG3608|consen  341 FLEVHEGNNPILYACHCCDRFFTSGKSLSAHL  372 (467)
T ss_pred             HHHhccCCCCCceeeecchhhhccchhHHHHH
Confidence            4433       3554     566666676665

>PHA02768 hypothetical protein; Provisional

Probab=98.93  E-value=3.1e-10  Score=59.71  Aligned_cols=40  Identities=15%  Similarity=0.288  Sum_probs=27.8

Q ss_pred             eecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc
Q psy553           60 YKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD  101 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~  101 (129)
                      |.|+.|++.|...++|..|+++|+  ++|+|..|++.|.+.+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s   45 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTG   45 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccc
Confidence            567777777777777777777766  5677777777776654

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.89  E-value=3.2e-10  Score=51.27  Aligned_cols=25  Identities=24%  Similarity=0.284  Sum_probs=20.2

Q ss_pred             hHHHhhhhhcCCCccchhhhhhhhh
Q psy553           74 HVQQHTRLHTVEGVNSCLQILSLWI   98 (129)
Q Consensus        74 ~l~~H~~~h~~~~~y~C~~C~~~f~   98 (129)
                      +|..|+++|++++||.|++|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4677888888888888888888875

...

>KOG1074|consensus

Probab=98.89  E-value=7.9e-10  Score=85.01  Aligned_cols=77  Identities=31%  Similarity=0.604  Sum_probs=68.2

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcC----CCccchh---hhhhhhhccc
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV----EGVNSCL---QILSLWIQLD  101 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~----~~~y~C~---~C~~~f~~~~  101 (129)
                      ..|..|.+|.++...+..|+.|.++|+|++||+|.+|++.|..+.+|+.|+..|--    ..++.|+   +|.+-|.+.=
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V  682 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAV  682 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccc
Confidence            35789999999999999999999999999999999999999999999999998843    2458899   9999999883


Q ss_pred             -cCcC
Q psy553          102 -LKDE  105 (129)
Q Consensus       102 -l~~h  105 (129)
                       |..|
T Consensus       683 ~lpQh  687 (958)
T KOG1074|consen  683 TLPQH  687 (958)
T ss_pred             cccce
Confidence             6665

>PHA02768 hypothetical protein; Provisional

Probab=98.84  E-value=1.3e-09  Score=57.37  Aligned_cols=43  Identities=19%  Similarity=0.413  Sum_probs=39.4

Q ss_pred             cccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHH
Q psy553           32 HQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQ   76 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~   76 (129)
                      |.|+.||+.|.....|..|++.|.  ++++|..|++.|...+.|+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            799999999999999999999998  6899999999998777664

>KOG1074|consensus

Probab=98.78  E-value=6.7e-09  Score=80.07  Aligned_cols=60  Identities=37%  Similarity=0.671  Sum_probs=44.4

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccc
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS   89 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~   89 (129)
                      ..+.|..|++.|.....|..|+++|++++||.|.+|++.|....+|+.||.+|.+..|..
T Consensus       878 n~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w~q~~s  937 (958)
T KOG1074|consen  878 NAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMWVQPPS  937 (958)
T ss_pred             chhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccccCCCc
Confidence            346777777777777777777777777777777777777777777777777776655543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.64  E-value=2.7e-08  Score=75.04  Aligned_cols=85  Identities=15%  Similarity=0.307  Sum_probs=67.6

Q ss_pred             CCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhc--------
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQ--------   99 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~--------   99 (129)
                      -++.+.|..|++.|. ...|..|+..+.  .++.|+ |+..+ ....|..|+.+|.+.+++.|..|++.|..        
T Consensus       450 l~~H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~  524 (567)
T PLN03086        450 AKNHVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVR  524 (567)
T ss_pred             cccCccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchh
Confidence            356788999999886 677899999874  789999 99654 66889999999999999999999999852        


Q ss_pred             ---cccCcC---CCCCCeeEeecc
Q psy553          100 ---LDLKDE---PRNRNYVVRFSW  117 (129)
Q Consensus       100 ---~~l~~h---~~~~~~~~~~~~  117 (129)
                         ..|..|   .+.+++.|..+.
T Consensus       525 d~~s~Lt~HE~~CG~rt~~C~~Cg  548 (567)
T PLN03086        525 DRLRGMSEHESICGSRTAPCDSCG  548 (567)
T ss_pred             hhhhhHHHHHHhcCCcceEccccC
Confidence               136666   457777775554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.56  E-value=3e-08  Score=74.77  Aligned_cols=74  Identities=18%  Similarity=0.324  Sum_probs=63.6

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCC----------chhHHHhhhhhcCCCccchhhhhhhhhc
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQ----------LSHVQQHTRLHTVEGVNSCLQILSLWIQ   99 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~----------~~~l~~H~~~h~~~~~y~C~~C~~~f~~   99 (129)
                      +++.|+ |++.+ .+..|..|+..|...+++.|..|+..|..          ...|..|.... |.+++.|..|++.+..
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrl  553 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVML  553 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeee
Confidence            678999 99754 67889999999999999999999998842          24788998875 9999999999999999


Q ss_pred             cccCcCC
Q psy553          100 LDLKDEP  106 (129)
Q Consensus       100 ~~l~~h~  106 (129)
                      +++..|.
T Consensus       554 rdm~~H~  560 (567)
T PLN03086        554 KEMDIHQ  560 (567)
T ss_pred             hhHHHHH
Confidence            9888773

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.44  E-value=1.5e-07  Score=42.35  Aligned_cols=25  Identities=60%  Similarity=1.299  Sum_probs=23.0

Q ss_pred             HHHHHHhhcCCCCceecccchhhcC
Q psy553           46 QLVQHIRVHTGEKPYKCTYCERRFK   70 (129)
Q Consensus        46 ~l~~h~~~h~~~~~~~C~~c~~~f~   70 (129)
                      +|..|+++|.+++||.|..|++.|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4789999999999999999999885

...

>PHA00733 hypothetical protein

Probab=98.36  E-value=6.1e-07  Score=55.91  Aligned_cols=55  Identities=33%  Similarity=0.551  Sum_probs=48.5

Q ss_pred             CCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcC
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +.+||.|..|++.|.....|..|++.+  ..++.|..|++.|.....|..|+....+
T Consensus        70 ~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         70 AVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            367899999999999999999999876  3579999999999999999999886544

>PHA00616 hypothetical protein

Probab=98.33  E-value=2.3e-07  Score=46.59  Aligned_cols=33  Identities=15%  Similarity=0.334  Sum_probs=18.4

Q ss_pred             CcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      ||.|..||+.|..+..|..|++.|++.+++.|.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            355555555555555555555555555555544

>PHA00616 hypothetical protein

Probab=98.30  E-value=4.8e-07  Score=45.45  Aligned_cols=34  Identities=18%  Similarity=0.244  Sum_probs=32.0

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      ||+|..||..|...+.+..|++.|++++++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            6899999999999999999999999999998865

>PHA00732 hypothetical protein

Probab=98.13  E-value=8.6e-07  Score=50.60  Aligned_cols=37  Identities=30%  Similarity=0.543  Sum_probs=20.6

Q ss_pred             CcccccchhhccChHHHHHHHhh-cCCCCceecccchhhcC
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRV-HTGEKPYKCTYCERRFK   70 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~~~C~~c~~~f~   70 (129)
                      ||.|..|++.|.....|..|++. |.+   +.|..|++.|.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~   38 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR   38 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC
Confidence            35566666666666666666553 332   35556665554

>PHA00732 hypothetical protein

Probab=97.95  E-value=7.3e-06  Score=46.78  Aligned_cols=43  Identities=26%  Similarity=0.417  Sum_probs=36.2

Q ss_pred             ceecccchhhcCCchhHHHhhhh-hcCCCccchhhhhhhhhccccCcCC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRL-HTVEGVNSCLQILSLWIQLDLKDEP  106 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~-h~~~~~y~C~~C~~~f~~~~l~~h~  106 (129)
                      ||.|..|++.|.....|..|++. |.   ++.|++|++.|.+  |..|.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~~--l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYRR--LNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeCC--hhhhh
Confidence            58899999999999999999984 54   3689999999985  45554

>KOG3993|consensus

Probab=97.86  E-value=3e-06  Score=61.44  Aligned_cols=74  Identities=23%  Similarity=0.445  Sum_probs=57.5

Q ss_pred             cccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhc--------C-------------------
Q psy553           32 HQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT--------V-------------------   84 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~--------~-------------------   84 (129)
                      |.|..|...|.....|..|.-.--....|+|+.|++.|....+|..|.+-|-        +                   
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            7888898888888888888654333356899999999999999988887551        1                   


Q ss_pred             ------CCccchhhhhhhhhccc-cCcC
Q psy553           85 ------EGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        85 ------~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                            +..|+|..|+|.|.+.- |++|
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKH  375 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKH  375 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHh
Confidence                  12399999999999986 7766

>KOG3993|consensus

Probab=97.86  E-value=6.6e-06  Score=59.75  Aligned_cols=54  Identities=26%  Similarity=0.565  Sum_probs=47.6

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCC---------------------------------CCceecccchhhcCCchhHH
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTG---------------------------------EKPYKCTYCERRFKQLSHVQ   76 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~---------------------------------~~~~~C~~c~~~f~~~~~l~   76 (129)
                      ..|+|++|++.|....+|.-|+++|..                                 +.+|.|..|++.|.....|.
T Consensus       294 vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~C~KkFrRqAYLr  373 (500)
T KOG3993|consen  294 VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHTCGKKFRRQAYLR  373 (500)
T ss_pred             eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHHhhhhhHHHHHHH
Confidence            459999999999999999999999832                                 13588999999999999999


Q ss_pred             Hhhhhhc
Q psy553           77 QHTRLHT   83 (129)
Q Consensus        77 ~H~~~h~   83 (129)
                      .|+.+|.
T Consensus       374 KHqlthq  380 (500)
T KOG3993|consen  374 KHQLTHQ  380 (500)
T ss_pred             HhHHhhh
Confidence            9988874

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.57  E-value=0.00018  Score=38.05  Aligned_cols=50  Identities=28%  Similarity=0.470  Sum_probs=34.7

Q ss_pred             CcccccchhhccChHHHHHHHhh-cCCC-CceecccchhhcCCchhHHHhhhhhc
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRV-HTGE-KPYKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~-~~~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      .|.|+.|++ ......|..|... |..+ +.+.|++|...+.  .+|..|+....
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            478999998 4556778888554 5543 5688888887543  47778876543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.55  E-value=4.6e-05  Score=32.91  Aligned_cols=22  Identities=45%  Similarity=0.741  Sum_probs=12.5

Q ss_pred             cccccchhhccChHHHHHHHhh
Q psy553           32 HQCQQCLKSFSSNHQLVQHIRV   53 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~   53 (129)
                      |.|+.|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3455566666666666555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.41  E-value=7.1e-05  Score=52.78  Aligned_cols=24  Identities=17%  Similarity=0.140  Sum_probs=20.1

Q ss_pred             cCCCccchhhhhhhhhccc-cCcCC
Q psy553           83 TVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        83 ~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      ...|||.|++|+|.|.... |+-|.
T Consensus       394 ~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         394 AKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             ccCCceeccccchhhccCccceecc
Confidence            3469999999999999996 77663

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.41  E-value=8.9e-05  Score=31.97  Aligned_cols=23  Identities=39%  Similarity=0.904  Sum_probs=18.7

Q ss_pred             eecccchhhcCCchhHHHhhhhh
Q psy553           60 YKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      |.|..|++.|.....|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57888888888888888888764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.21  E-value=0.00021  Score=32.05  Aligned_cols=23  Identities=43%  Similarity=0.765  Sum_probs=12.5

Q ss_pred             cccccchhhccChHHHHHHHhhc
Q psy553           32 HQCQQCLKSFSSNHQLVQHIRVH   54 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h   54 (129)
                      |.|..|++.|.....|..|++.|
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            45555555555555555555444

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.09  E-value=0.00032  Score=31.42  Aligned_cols=25  Identities=36%  Similarity=0.903  Sum_probs=20.7

Q ss_pred             ceecccchhhcCCchhHHHhhhhhc
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      ||.|..|+..|.....|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            5788888888888888888888764

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=96.96  E-value=0.00015  Score=38.28  Aligned_cols=46  Identities=20%  Similarity=0.258  Sum_probs=33.2

Q ss_pred             ceecccchhhcCCchhHHHhhhh-hcC-CCccchhhhhhhhhccccCcCC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRL-HTV-EGVNSCLQILSLWIQLDLKDEP  106 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~-h~~-~~~y~C~~C~~~f~~~~l~~h~  106 (129)
                      -|.|+.|++ -.+...|..|... |.. .+.+.|++|...+.. +|..|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~~-~l~~Hl   49 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVTD-NLIRHL   49 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhhh-HHHHHH
Confidence            478999999 4567889999665 443 357999999986543 455554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PRK04860 hypothetical protein; Provisional

Probab=96.94  E-value=0.00034  Score=45.23  Aligned_cols=38  Identities=26%  Similarity=0.546  Sum_probs=31.6

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhcc
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQL  100 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~  100 (129)
                      +|.|. |+.   ....+..|.+++.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            58887 876   667788999999999999999999888765

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.91  E-value=0.00068  Score=29.07  Aligned_cols=21  Identities=52%  Similarity=0.854  Sum_probs=9.4

Q ss_pred             ccccchhhccChHHHHHHHhh
Q psy553           33 QCQQCLKSFSSNHQLVQHIRV   53 (129)
Q Consensus        33 ~C~~C~~~f~~~~~l~~h~~~   53 (129)
                      .|..|+..|.....|..|+..
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHHh
Confidence            445555555555555555443

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=96.88  E-value=0.00071  Score=28.99  Aligned_cols=23  Identities=35%  Similarity=0.896  Sum_probs=19.3

Q ss_pred             eecccchhhcCCchhHHHhhhhh
Q psy553           60 YKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      |.|++|+..|.....+..|+..+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            68999999999999999999876

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.57  E-value=0.0012  Score=34.07  Aligned_cols=32  Identities=19%  Similarity=0.487  Sum_probs=15.8

Q ss_pred             CCCceecccchhhcCCchhHHHhhhhhcCCCc
Q psy553           56 GEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV   87 (129)
Q Consensus        56 ~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~   87 (129)
                      +..|..|++|+..+.+..+|.+|+...++.+|
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            34556666666666666666666665555444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.57  E-value=0.0019  Score=37.86  Aligned_cols=75  Identities=21%  Similarity=0.280  Sum_probs=17.7

Q ss_pred             ccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCCCCCCe
Q psy553           33 QCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEPRNRNY  111 (129)
Q Consensus        33 ~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~~~~~~  111 (129)
                      .|..|+..|.....|..|+....+...-..    ..+.....+..+...- -...+.|..|++.|.... |..|++.+.|
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~~~----~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~~H   75 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIPDQ----KYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSKHH   75 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHTTT
T ss_pred             Cccccccccccccccccccccccccccccc----cccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCccC
Confidence            488899999999999999865433211110    1111222222222211 122577888888887775 7777665444


Q ss_pred             e
Q psy553          112 V  112 (129)
Q Consensus       112 ~  112 (129)
                      .
T Consensus        76 ~   76 (100)
T PF12756_consen   76 K   76 (100)
T ss_dssp             T
T ss_pred             C
Confidence            3

>smart00355 ZnF_C2H2 zinc finger

Probab=96.31  E-value=0.0045  Score=26.72  Aligned_cols=22  Identities=41%  Similarity=0.859  Sum_probs=11.8

Q ss_pred             ccccchhhccChHHHHHHHhhc
Q psy553           33 QCQQCLKSFSSNHQLVQHIRVH   54 (129)
Q Consensus        33 ~C~~C~~~f~~~~~l~~h~~~h   54 (129)
                      .|..|++.|.....+..|+..|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4555555555555555555433

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.18  E-value=0.006  Score=31.54  Aligned_cols=34  Identities=21%  Similarity=0.502  Sum_probs=23.7

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKP   59 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   59 (129)
                      ..++.|..|++|+..+....+|.+|+....+.+|
T Consensus        19 ~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   19 SQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             CTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            3456789999999999999999999988776665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.13  E-value=0.0044  Score=26.74  Aligned_cols=24  Identities=38%  Similarity=0.787  Sum_probs=19.3

Q ss_pred             eecccchhhcCCchhHHHhhhhhc
Q psy553           60 YKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      +.|..|+..|.....+..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            468888888888888888887653

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=95.98  E-value=0.00024  Score=41.82  Aligned_cols=24  Identities=29%  Similarity=0.894  Sum_probs=17.2

Q ss_pred             ceecccchhhcCCchhHHHhhhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      .+.|.+|+..|.....|..|++.+
T Consensus        50 ~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             CCCCCccCCCCcCHHHHHHHHcCc
Confidence            467777777777777777777765

>PRK04860 hypothetical protein; Provisional

Probab=95.66  E-value=0.0095  Score=38.59  Aligned_cols=39  Identities=28%  Similarity=0.609  Sum_probs=33.0

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCc
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQL   72 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~   72 (129)
                      -+|.|. |+.   ....+..|.+++.+.++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            479997 987   566788999999999999999999877643

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.19  E-value=0.0016  Score=29.22  Aligned_cols=20  Identities=15%  Similarity=0.127  Sum_probs=9.7

Q ss_pred             cchhhhhhhhhccc-cCcCCC
Q psy553           88 NSCLQILSLWIQLD-LKDEPR  107 (129)
Q Consensus        88 y~C~~C~~~f~~~~-l~~h~~  107 (129)
                      |.|..|++.|.... |..|+.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            34555555555553 444443

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.17  E-value=0.012  Score=25.61  Aligned_cols=20  Identities=55%  Similarity=0.909  Sum_probs=10.4

Q ss_pred             ccccchhhccChHHHHHHHh
Q psy553           33 QCQQCLKSFSSNHQLVQHIR   52 (129)
Q Consensus        33 ~C~~C~~~f~~~~~l~~h~~   52 (129)
                      .|..|+..|.....+..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            45555555555555555543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=94.89  E-value=0.017  Score=25.02  Aligned_cols=22  Identities=27%  Similarity=0.715  Sum_probs=17.2

Q ss_pred             eecccchhhcCCchhHHHhhhh
Q psy553           60 YKCTYCERRFKQLSHVQQHTRL   81 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~~   81 (129)
                      |.|.+|...|.....+..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            5678888888888888888764

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=94.31  E-value=0.032  Score=23.97  Aligned_cols=20  Identities=30%  Similarity=0.635  Sum_probs=8.4

Q ss_pred             ccccchhhccChHHHHHHHhh
Q psy553           33 QCQQCLKSFSSNHQLVQHIRV   53 (129)
Q Consensus        33 ~C~~C~~~f~~~~~l~~h~~~   53 (129)
                      .|..|..... ...|..|+..
T Consensus         2 ~C~~C~y~t~-~~~l~~H~~~   21 (24)
T PF13909_consen    2 KCPHCSYSTS-KSNLKRHLKR   21 (24)
T ss_dssp             E-SSSS-EES-HHHHHHHHHH
T ss_pred             CCCCCCCcCC-HHHHHHHHHh
Confidence            4555554444 4445555443

>KOG2231|consensus

Probab=92.79  E-value=0.088  Score=41.29  Aligned_cols=72  Identities=19%  Similarity=0.240  Sum_probs=47.4

Q ss_pred             ChHHHHHHHh-hcCCCCceecccch---------hhcCCchhHHHhhhhhcC-C---Cc-cchhhhhhhhhccc-cCcCC
Q psy553           43 SNHQLVQHIR-VHTGEKPYKCTYCE---------RRFKQLSHVQQHTRLHTV-E---GV-NSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        43 ~~~~l~~h~~-~h~~~~~~~C~~c~---------~~f~~~~~l~~H~~~h~~-~---~~-y~C~~C~~~f~~~~-l~~h~  106 (129)
                      ....|..|++ .|..   +.|.+|.         ........|+.|++.-.. +   +. -.|..|...|...+ |.+|+
T Consensus       126 s~~~Lk~H~~~~H~~---~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~  202 (669)
T KOG2231|consen  126 SVENLKNHMRDQHKL---HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHL  202 (669)
T ss_pred             HHHHHHHHHHHhhhh---hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhh
Confidence            6677888985 4533   3333322         222355667777664321 1   11 34899999999997 99999


Q ss_pred             CCCCeeEeecc
Q psy553          107 RNRNYVVRFSW  117 (129)
Q Consensus       107 ~~~~~~~~~~~  117 (129)
                      +..++.|.|+.
T Consensus       203 ~~~h~~chfC~  213 (669)
T KOG2231|consen  203 RFDHEFCHFCD  213 (669)
T ss_pred             ccceeheeecC
Confidence            99999998884

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.16  E-value=0.063  Score=25.20  Aligned_cols=9  Identities=11%  Similarity=-0.134  Sum_probs=5.0

Q ss_pred             Cccchhhhh
Q psy553           86 GVNSCLQIL   94 (129)
Q Consensus        86 ~~y~C~~C~   94 (129)
                      .++.|++|+
T Consensus        16 ~~~~CP~Cg   24 (33)
T cd00350          16 APWVCPVCG   24 (33)
T ss_pred             CCCcCcCCC
Confidence            455565555

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=91.96  E-value=0.05  Score=39.30  Aligned_cols=54  Identities=22%  Similarity=0.440  Sum_probs=39.4

Q ss_pred             ecccchhhcCCchhHHHhhhhhcCCCccchhhhhh-------hhhccc-cCcCCCCCCeeEeeccc
Q psy553           61 KCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILS-------LWIQLD-LKDEPRNRNYVVRFSWW  118 (129)
Q Consensus        61 ~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~-------~f~~~~-l~~h~~~~~~~~~~~~~  118 (129)
                      .|..|...|-....|..|++.-    --.|-+|++       .|...+ |.+|.+..+|.|+|+.+
T Consensus       222 ~C~FC~~~FYdDDEL~~HcR~~----HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~ct~qtc  283 (493)
T COG5236         222 LCIFCKIYFYDDDELRRHCRLR----HEACHICDMVGPIRYQYFKSYEDLEAHFRNAHYCCTFQTC  283 (493)
T ss_pred             hhhhccceecChHHHHHHHHhh----hhhhhhhhccCccchhhhhCHHHHHHHhhcCceEEEEEEE
Confidence            4777888888888888888743    335666664       355554 88999999999877654

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=91.72  E-value=0.048  Score=39.73  Aligned_cols=62  Identities=34%  Similarity=0.626  Sum_probs=42.4

Q ss_pred             CcccccchhhccChHHHHHHHh--hcCCC--Cceecc--cchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIR--VHTGE--KPYKCT--YCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~--~h~~~--~~~~C~--~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      ++.|..|...|.....+..|.+  .|.++  +++.|+  .|+..|.....+..|..+|.+.+++.|..
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKL  356 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccc
Confidence            5666677777777777777777  57666  677776  57777777777777777776666655543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=91.64  E-value=0.19  Score=21.96  Aligned_cols=19  Identities=26%  Similarity=0.660  Sum_probs=9.5

Q ss_pred             ccccchhhccChHHHHHHHh
Q psy553           33 QCQQCLKSFSSNHQLVQHIR   52 (129)
Q Consensus        33 ~C~~C~~~f~~~~~l~~h~~   52 (129)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 3444455543

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=89.35  E-value=0.079  Score=38.33  Aligned_cols=83  Identities=20%  Similarity=0.331  Sum_probs=51.9

Q ss_pred             ccccc--chhhccChHHHHHHHhhcCCCCceecccchh---------hcCCchhHHHhhhhhcCCCc----cchhhhhhh
Q psy553           32 HQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCTYCER---------RFKQLSHVQQHTRLHTVEGV----NSCLQILSL   96 (129)
Q Consensus        32 ~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~---------~f~~~~~l~~H~~~h~~~~~----y~C~~C~~~   96 (129)
                      |.|+.  |......-..|..|..+..+.  +.|.+|..         .......|..|...-..+..    -.|..|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            66765  554444445577776654433  45555542         23345567777664433322    349999988


Q ss_pred             hhccc-cCcCCCCCCeeEeec
Q psy553           97 WIQLD-LKDEPRNRNYVVRFS  116 (129)
Q Consensus        97 f~~~~-l~~h~~~~~~~~~~~  116 (129)
                      |-..| |..|++.++-.|..+
T Consensus       230 FYdDDEL~~HcR~~HE~ChIC  250 (493)
T COG5236         230 FYDDDELRRHCRLRHEACHIC  250 (493)
T ss_pred             ecChHHHHHHHHhhhhhhhhh
Confidence            88887 999999888876443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=88.30  E-value=0.35  Score=22.50  Aligned_cols=22  Identities=23%  Similarity=0.587  Sum_probs=12.4

Q ss_pred             ceecccchhhcCCchhHHHhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTR   80 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~   80 (129)
                      +|.|.+|...|.....+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3556666666665555555544

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=87.34  E-value=0.24  Score=32.26  Aligned_cols=23  Identities=22%  Similarity=0.368  Sum_probs=18.6

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCCCccchhhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQIL   94 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~   94 (129)
                      .|.|.+||.             ++-|+-|-+|++|+
T Consensus       134 ~~vC~vCGy-------------~~~ge~P~~CPiCg  156 (166)
T COG1592         134 VWVCPVCGY-------------THEGEAPEVCPICG  156 (166)
T ss_pred             EEEcCCCCC-------------cccCCCCCcCCCCC
Confidence            699999986             34557789999998

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=86.47  E-value=0.24  Score=36.09  Aligned_cols=49  Identities=31%  Similarity=0.365  Sum_probs=43.6

Q ss_pred             CceecccchhhcCCchhHHHhhh--hhcCC--Cccchh--hhhhhhhccc-cCcCC
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTR--LHTVE--GVNSCL--QILSLWIQLD-LKDEP  106 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~--~h~~~--~~y~C~--~C~~~f~~~~-l~~h~  106 (129)
                      .++.|..|...|.....+..|.+  .|.++  +|+.|+  .|++.|.+.+ +..|.
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~  343 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHI  343 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCc
Confidence            36788889999999999999999  89999  999999  7999999997 77664

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=86.06  E-value=0.31  Score=23.01  Aligned_cols=9  Identities=11%  Similarity=0.080  Sum_probs=5.0

Q ss_pred             ccchhhhhh
Q psy553           87 VNSCLQILS   95 (129)
Q Consensus        87 ~y~C~~C~~   95 (129)
                      |..|++|+.
T Consensus        18 p~~CP~Cg~   26 (34)
T cd00729          18 PEKCPICGA   26 (34)
T ss_pred             CCcCcCCCC
Confidence            455666653

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2186|consensus

Probab=85.99  E-value=0.39  Score=33.32  Aligned_cols=50  Identities=22%  Similarity=0.462  Sum_probs=37.6

Q ss_pred             CcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhc
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      .|.|..||.... +..+-+|+....+ .-|.|.-|+..|.. ..+..|...-+
T Consensus         3 ~FtCnvCgEsvK-Kp~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCIT   52 (276)
T KOG2186|consen    3 FFTCNVCGESVK-KPQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCIT   52 (276)
T ss_pred             EEehhhhhhhcc-ccchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcc
Confidence            367999997766 4556679888887 56899999999987 56777766443

>KOG2893|consensus

Probab=84.67  E-value=0.36  Score=33.31  Aligned_cols=41  Identities=29%  Similarity=0.702  Sum_probs=25.6

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhH
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHV   75 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l   75 (129)
                      ++| |=.|.+.|.....|..|+..    +-|+|.+|-+.+.+..-|
T Consensus        10 kpw-cwycnrefddekiliqhqka----khfkchichkkl~sgpgl   50 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGL   50 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCc
Confidence            444 33677888877777777653    457888876544444333

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=84.55  E-value=0.17  Score=34.42  Aligned_cols=14  Identities=14%  Similarity=-0.040  Sum_probs=11.1

Q ss_pred             cchhhhhhhhhccc
Q psy553           88 NSCLQILSLWIQLD  101 (129)
Q Consensus        88 y~C~~C~~~f~~~~  101 (129)
                      .+|+.||.++...+
T Consensus        49 ~vCP~CgyA~~~~~   62 (214)
T PF09986_consen   49 WVCPHCGYAAFEED   62 (214)
T ss_pred             EECCCCCCcccccc
Confidence            57999998888764

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=83.83  E-value=0.19  Score=32.35  Aligned_cols=13  Identities=15%  Similarity=0.340  Sum_probs=8.3

Q ss_pred             cchhhhhhhhhcc
Q psy553           88 NSCLQILSLWIQL  100 (129)
Q Consensus        88 y~C~~C~~~f~~~  100 (129)
                      |.|+.||++|...
T Consensus        29 ~~c~~c~~~f~~~   41 (154)
T PRK00464         29 RECLACGKRFTTF   41 (154)
T ss_pred             eeccccCCcceEe
Confidence            6666666666654

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=82.22  E-value=0.89  Score=24.00  Aligned_cols=27  Identities=15%  Similarity=0.486  Sum_probs=20.2

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhh
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRV   53 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~   53 (129)
                      .++..+.|+.|++.|.....+.+|...
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNK   39 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNK   39 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhH
Confidence            456677888888888888877777653

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=81.05  E-value=0.6  Score=22.43  Aligned_cols=11  Identities=27%  Similarity=0.812  Sum_probs=5.3

Q ss_pred             ceecccchhhc
Q psy553           59 PYKCTYCERRF   69 (129)
Q Consensus        59 ~~~C~~c~~~f   69 (129)
                      ..+|..|+..|
T Consensus        25 ~vrC~~C~~~f   35 (37)
T PF13719_consen   25 KVRCPKCGHVF   35 (37)
T ss_pred             EEECCCCCcEe
Confidence            34555555444

>KOG2186|consensus

Probab=80.45  E-value=0.68  Score=32.16  Aligned_cols=45  Identities=18%  Similarity=0.394  Sum_probs=36.0

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccccCcC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDE  105 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~l~~h  105 (129)
                      -|.|.+||....- ..+-+|+....+ ..|.|-.|++.|..-+...|
T Consensus         3 ~FtCnvCgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~~sYknH   47 (276)
T KOG2186|consen    3 FFTCNVCGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFERVSYKNH   47 (276)
T ss_pred             EEehhhhhhhccc-cchHHHHHhccC-CeeEEeecccccccchhhhh
Confidence            3789999987644 456678887766 68999999999999777777

>KOG1146|consensus

Probab=80.16  E-value=1.2  Score=37.75  Aligned_cols=51  Identities=25%  Similarity=0.523  Sum_probs=36.5

Q ss_pred             CCcccccchhhccChHHHHHHHhh-cC------------------------CCCceecccchhhcCCchhHHHhhh
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRV-HT------------------------GEKPYKCTYCERRFKQLSHVQQHTR   80 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~-h~------------------------~~~~~~C~~c~~~f~~~~~l~~H~~   80 (129)
                      +.+.|+.|+..|+....|..||++ |.                        +-++|.|..|...+.....|.+|+.
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihlq  539 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQ  539 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHH
Confidence            667888888888888888888876 11                        1246677777777777777776655

>KOG2893|consensus

Probab=80.01  E-value=0.78  Score=31.70  Aligned_cols=43  Identities=26%  Similarity=0.424  Sum_probs=31.3

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhh-hccccCcC
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLW-IQLDLKDE  105 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f-~~~~l~~h  105 (129)
                      ++| |=+|.+-|.....|++|++    .+-|+|-+|.|-. .-..|.-|
T Consensus        10 kpw-cwycnrefddekiliqhqk----akhfkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   10 KPW-CWYCNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             Cce-eeecccccchhhhhhhhhh----hccceeeeehhhhccCCCceee
Confidence            454 4569999999999999988    5679999998543 33334444

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	129
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-13
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-12
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-11
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		1e-10
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-10
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		3e-10
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		3e-10
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-10
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-10
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		3e-10
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-10
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-10
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		7e-10
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		8e-10
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-09
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		8e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-08
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-07
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		2e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		4e-07
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		5e-07
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		5e-07
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-06
2eop_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		9e-06
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		2e-05
2emk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-05
2eq2_A	46	Solution Structure Of The 16th C2h2 Type Zinc Finge		2e-05
2emj_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-05
2emm_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-05
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-05
2ytq_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-05
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		9e-05
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		9e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-04
2eog_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-04
2ytb_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		1e-04
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		1e-04
2em2_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		1e-04
2en1_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
2ytk_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		3e-04
2emy_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2yth_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2eor_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2enf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		3e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		4e-04
2eme_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2ytt_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2emw_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2enh_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2ema_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2yu8_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		5e-04
2yta_A	41	Solution Structure Of C2h2 Type Zinc Finger Domain		8e-04
2eoi_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		8e-04
2en2_A	42	Solution Structure Of The C2h2 Type Zinc Finger (Re		8e-04
2eqw_A	42	Solution Structure Of The 6th C2h2 Type Zinc Finger		8e-04
2ytf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04
2yti_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04
2ytn_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		9e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 68.6 bits (166), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 31/73 (42%), Positives = 43/73 (58%)
Query: 28  ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV 87
             KP++C +C KSFS    L +H R HTGEKPYKC  C + F Q ++++ H R HT E  
Sbjct: 46  GEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKP 105
Query: 88  NSCLQILSLWIQL 100
            +C +    + QL
Sbjct: 106 YACPECGKSFSQL 118

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 67.4 bits (163), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
           KP++C +C KSFS +  L +H R HTGEKPYKC  C + F Q S +Q+H R HT E    
Sbjct: 3   KPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYK 62
Query: 90  CLQILSLWIQLD 101
           C +    + + D
Sbjct: 63  CPECGKSFSRSD 74

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 63.9 bits (154), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 30/54 (55%), Positives = 37/54 (68%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT 83
          KP+ C +C K+FS +  LVQH RVHTGEKPYKC  C + F Q S +  H R+HT
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 61.2 bits (147), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 32 HQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
          ++C +C KSFS +  L +H R HTGEKPYKC  C + F Q SH+  H R+HT  G +S
Sbjct: 19 YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP QC+ C+++FS +  L  HIR HTGEKP+ C  C R+F +    ++HT++H
Sbjct: 31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP QC+ C+++FS +  L  HIR HTGEKP+ C  C R+F +    ++HT++H
Sbjct: 31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP QC+ C+++FS +  L  HIR HTGEKP+ C  C R+F +    ++HT++H
Sbjct: 31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP QC+ C+++FS +  L  HIR HTGEKP+ C  C R+F +    ++HT++H
Sbjct: 31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP QC+ C+++FS +  L  HIR HTGEKP+ C  C R+F +    ++HT++H
Sbjct: 31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 60.1 bits (144), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP QC+ C+++FS +  L  HIR HTGEKP+ C  C R+F +    ++HT++H
Sbjct: 30 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 84

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 26/55 (47%), Positives = 36/55 (65%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP QC+ C+++FS +  L QHIR HTGEKP+ C  C R+F  L    +HT++H
Sbjct: 31 GQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFATLHTRDRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 59.7 bits (143), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 24/55 (43%), Positives = 36/55 (65%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP QC+ C+++FS +  L  HIR HTGEKP+ C  C R+F +    ++HT++H
Sbjct: 31 GQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH 85

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 29/65 (44%), Positives = 41/65 (63%), Gaps = 2/65 (3%)
Query: 28 ANKPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
            KP+QC  + C + FS + QL +H R HTG KP++C  C+R+F +  H++ HTR HT E
Sbjct: 33 GEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE 92
Query: 86 GVNSC 90
             SC
Sbjct: 93 KPFSC 97

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 58.5 bits (140), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 37/57 (64%)
Query: 29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          +KP++C +C  SF     L  H  VHTGEKPY+C  C  +F + ++++ HTR+H+ E
Sbjct: 15 DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE 71

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP QC+ C+++FS    L  HIR HTGEKP+ C  C R+F  L    +HT++H
Sbjct: 31 GQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRKFATLHTRTRHTKIH 85

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 55.5 bits (132), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 32/49 (65%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQH 78
          KP QC+ C+++FS +  L  HIR HTGEKP+ C  C R+F +    ++H
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 50

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 35/58 (60%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          ++ PH+C+ C K FS   +L  H+R HTG KPYKC  C+      S + +H R+H+ E
Sbjct: 5  SSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)
Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT 83
          +P+ C  + C + FS + +L +HIR+HTG+KP++C  C R F +  H+  H R HT
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 35/57 (61%)
Query: 34 CQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
          C+ C KSF  +  L  H+ +H+  +PY C YC +RF Q S +++HT +HT E  + C
Sbjct: 4  CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 37/60 (61%), Gaps = 2/60 (3%)
Query: 33  QCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVEGVNSC 90
           +C +  KSF + ++LV HIRVHTGEKP+ C +  C + F +  +++ H R HT E    C
Sbjct: 64  ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC 123

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 19/40 (47%), Positives = 26/40 (65%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRF 69
          +P+ C  C K F   H LV H+++HTG KPY+C  C +RF
Sbjct: 36 RPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRF 75

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 49.7 bits (117), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/50 (46%), Positives = 30/50 (60%)
Query: 33 QCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
          +C  C K F SN+ L  H+R HTGEKPYKC +CE    Q + ++ H   H
Sbjct: 6  ECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERH 55

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 49.3 bits (116), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 23/56 (41%), Positives = 37/56 (66%), Gaps = 2/56 (3%)
Query: 32 HQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          H C +C K+F  + +L +H  VHTGEKP++CT+  C +RF    +++ H R+HT +
Sbjct: 35 HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 90

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 27/68 (39%), Positives = 35/68 (51%), Gaps = 5/68 (7%)
Query: 28  ANKPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQH-TRLH 82
             KPH+C  + C KS+S    L  H+R HTGEKPY C +  C + F   S   +H  R H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123
Query: 83  TVEGVNSC 90
           + E    C
Sbjct: 124 SNEKPYVC 131

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 25/61 (40%), Positives = 35/61 (57%), Gaps = 4/61 (6%)
Query: 27 EANKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLH 82
          E  + H C    C K ++ +  L  H+R HTGEKPYKCT+  C+ RF +   + +H R H
Sbjct: 11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKH 70
Query: 83 T 83
          T
Sbjct: 71 T 71

>pdb|2EOP|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 719- 751) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 24/30 (80%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KPH+C++C KSFS N QL+ H R+HTGE P
Sbjct: 11 KPHECRECGKSFSFNSQLIVHQRIHTGENP 40

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 45.1 bits (105), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 20/66 (30%), Positives = 36/66 (54%)
Query: 34 CQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI 93
          C+ C + F+ ++ L+ H R HT E+PY C  C + F++  H++ H  +H+ E    C + 
Sbjct: 20 CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79
Query: 94 LSLWIQ 99
             + Q
Sbjct: 80 GKGFCQ 85

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 44.7 bits (104), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Query: 37 CLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLH 82
          C K++  +  L  H R HTGEKP+ C++  CERRF +   + +H R H
Sbjct: 25 CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|2EMK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 668- 700) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/31 (58%), Positives = 24/31 (77%)
Query: 29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
           KP++C++C K+FS    L+QH RVHTGEKP
Sbjct: 10 EKPYECKECGKAFSQTTHLIQHQRVHTGEKP 40

>pdb|2EQ2|A Chain A, Solution Structure Of The 16th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 43.9 bits (102), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 23/30 (76%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP+QC +C K+FS   +L +H RVHTGEKP
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVHTGEKP 40

>pdb|2EMJ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 612- 644) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP +C +C KSFS + QL  H R+HTGEKP
Sbjct: 11 KPFECAECGKSFSISSQLATHQRIHTGEKP 40

>pdb|2EMM|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 544- 576) Of Human Zinc Finger Protein 95 Homolog Length = 46

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 23/30 (76%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          +PH+C +C KSF  +  L+QH R+HTGEKP
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQRIHTGEKP 40

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP++C +C K+FS   +L +H R+HTGEKP
Sbjct: 11 KPYKCNECGKAFSQTSKLARHQRIHTGEKP 40

>pdb|2YTQ|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 775- 807) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP+ C +C K+FSS   L+ H+R H+GEKP
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKP 40

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 36 QCLKSFSSNHQLVQHIRVHTGEKPYKCT--YCERRFKQLSHVQQHTRLHTVEGVNSC 90
           C  +++ N +L  H+  HTGEKP+ C    CE+ F  L H+ +H+  HT E   +C
Sbjct: 10 DCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTC 66

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 42.0 bits (97), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 28 ANKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP+ C    C   F+ + +L +H R HTG +P++C  C+R F +  H+  H + H
Sbjct: 33 GEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 19/57 (33%), Positives = 31/57 (54%), Gaps = 2/57 (3%)
Query: 28 ANKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
            KP+ C    C   F+ + +L +H R HTG +P++C  C+R F +  H+  H + H
Sbjct: 32 GEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>pdb|2EOG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 693- 723) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP+ C +C K+F S   L+ H+R HTGEKP
Sbjct: 9  KPYGCSECGKAFRSKSYLIIHMRTHTGEKP 38

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 26/49 (53%)
Query: 34 CQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
          C+ C K F   + L +H   H+GEKPY C  C  RFK+   +  H R H
Sbjct: 10 CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSH 58

>pdb|2YTB|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 5 In Zinc Finger Protein 32 Length = 42

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 17/30 (56%), Positives = 21/30 (70%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP++C QC K+FS    L+ HIRVHTG  P
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP++C +C K+F+    L QH R+HTGEKP
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|2EM2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 584- 616) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP +C++C K+F  N  L  H+R+HTGEKP
Sbjct: 11 KPFKCKECGKAFRQNIHLASHLRIHTGEKP 40

>pdb|2EN1|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 563- 595) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP +C++C K F+ N QL  H RVHTGEKP
Sbjct: 11 KPFKCEECGKRFTQNSQLHSHQRVHTGEKP 40

>pdb|2YTK|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 396- 428) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP++C +C K F+ N  L  H R+HTGEKP
Sbjct: 11 KPYKCNECGKVFTQNSHLTNHWRIHTGEKP 40

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/57 (36%), Positives = 32/57 (56%), Gaps = 2/57 (3%)
Query: 36 QCLKSFSSNHQLVQHIRVHTGEKPYKCT--YCERRFKQLSHVQQHTRLHTVEGVNSC 90
           C  +++ N +L  H+  HTGEKP+ C    CE+ F  L H+ +H+  HT E   +C
Sbjct: 19 DCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTC 75

>pdb|2EMY|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 551- 583) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 15/29 (51%), Positives = 21/29 (72%)
Query: 31 PHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          P++C +C K+FS  +QL+ H R H GEKP
Sbjct: 12 PYECHECGKAFSRKYQLISHQRTHAGEKP 40

>pdb|2YTH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 479- 511) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 21/30 (70%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP QC++C K F+ N  L  H RVHTGEKP
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKP 40

>pdb|2EOR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 255- 287) Of Human Zinc Finger Protein 224 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 23/30 (76%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP+ C++C K+F  + QL +H R+HTGEKP
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQRIHTGEKP 40

>pdb|2ENF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 340- 372) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP++C +C K F+ N  LV+H  +HTGEKP
Sbjct: 11 KPYKCNECGKVFTQNSHLVRHRGIHTGEKP 40

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/38 (42%), Positives = 22/38 (57%)
Query: 34 CQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQ 71
          C+ C ++F+    L +H R HT EKPY C  C R F +
Sbjct: 5  CEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTR 42

>pdb|2EME|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 725- 757) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 40.0 bits (92), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP+ C  C K+F  + +LV+H R+HTGEKP
Sbjct: 11 KPYVCDYCGKAFGLSAELVRHQRIHTGEKP 40

>pdb|2YTT|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 204- 236) Of Human Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP+QC +C KSFS +++L QH   HT EKP
Sbjct: 11 KPYQCSECGKSFSGSYRLTQHWITHTREKP 40

>pdb|2EMW|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 301- 331) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 39.7 bits (91), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEK 58
            KP+ C +C K FSS   L+ H R+HTGEK
Sbjct: 7  GEKPYGCNECGKDFSSKSYLIVHQRIHTGEK 37

>pdb|2ENH|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 556- 588) Of Human Zinc Finger Protein 28 Homolog Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP++C  C K+FS +  L QH RVH+GEKP
Sbjct: 11 KPYECDVCRKAFSHHASLTQHQRVHSGEKP 40

>pdb|2EMA|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 312- 344) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 39.7 bits (91), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 17/30 (56%), Positives = 22/30 (73%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          K ++C +C K FS N QL QH ++HTGEKP
Sbjct: 11 KRYKCNECGKVFSRNSQLSQHQKIHTGEKP 40

>pdb|2YU8|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 648- 680) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP++C +C K F+ N  L +H RVHTG KP
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRRVHTGGKP 40

>pdb|2YTA|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 3 In Zinc Finger Protein 32 Length = 41

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/30 (53%), Positives = 20/30 (66%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP+QC++C KSFS    L  H R+HTG  P
Sbjct: 9  KPYQCKECGKSFSQRGSLAVHERLHTGSGP 38

>pdb|2EOI|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 329- 359) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 22/32 (68%)
Query: 28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
            K H+C +C K+FS + QLV H R+HTGE P
Sbjct: 7  GEKLHECSECRKTFSFHSQLVIHQRIHTGENP 38

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 30/51 (58%), Gaps = 1/51 (1%)
Query: 34  CQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQH-TRLHT 83
           C  C ++F    +L  H+  HTGE PYKC+ C ++F Q   +Q H  +LH+
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHS 119

>pdb|2EN2|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 598- 626) Of Human B-Cell Lymphoma 6 Protein Length = 42

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/33 (48%), Positives = 22/33 (66%)
Query: 57 EKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
          EKPYKC  C  RF Q++H++ H  +HT  G +S
Sbjct: 9  EKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>pdb|2EQW|A Chain A, Solution Structure Of The 6th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 484 Length = 42

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Composition-based stats.
 Identities = 16/31 (51%), Positives = 20/31 (64%)
Query: 55 TGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          +GEKPY CT C + F + SH   H R+HT E
Sbjct: 6  SGEKPYVCTECGKAFIRKSHFITHERIHTGE 36

>pdb|2YTF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 607- 639) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 38.9 bits (89), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP +C +C K+F++   L+ H R HTGEKP
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQRTHTGEKP 40

>pdb|2YTI|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 564- 596) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP++C +C K F+ N  L +H  +HTGEKP
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKP 40

>pdb|2YTN|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 732- 764) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 15/30 (50%), Positives = 21/30 (70%)
Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
          KP++C +C K F+ N  L +H  +HTGEKP
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKP 40

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	129
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-21
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-23
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-18
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-07
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-07
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-22
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-22
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-12
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-22
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-18
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-21
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-21
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-19
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-10
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-21
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-20
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-20
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-21
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-21
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-21
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-11
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-21
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-20
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-20
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-07
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-14
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-20
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-20
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-15
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-04
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-04
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-19
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-19
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-19
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-16
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-19
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-18
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-17
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-18
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-14
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-13
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-18
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-18
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-18
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-17
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-12
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-17
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-17
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-15
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-14
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-14
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-14
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-14
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	5e-14
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-11
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-14
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-14
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-13
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-12
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-13
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-13
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-13
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-13
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-13
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-13
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	5e-10
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-13
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-13
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-11
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-12
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-13
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-13
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-13
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-12
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-13
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-13
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-13
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-12
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-13
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-13
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-13
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-12
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-13
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-13
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-13
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-13
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-13
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-13
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-12
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-13
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-13
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-13
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-13
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-13
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-13
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-13
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-13
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-12
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-13
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-13
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-13
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-13
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-12
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	5e-13
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-12
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-13
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-13
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-12
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-12
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-13
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-13
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-13
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-12
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-13
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-13
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-12
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-13
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	9e-12
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-13
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-13
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-13
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-13
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-13
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-13
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-13
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	9e-13
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-13
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-12
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-12
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-12
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-12
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-12
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-12
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	2e-12
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	4e-08
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-12
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-12
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-12
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-11
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	7e-12
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	9e-12
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-10
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-11
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-10
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-09
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-11
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-10
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-08
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-10
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-10
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	8e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-10
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-07
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-06
1ard_A	29	Yeast transcription factor ADR1; transcription reg	1e-06
1ard_A	29	Yeast transcription factor ADR1; transcription reg	4e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	3e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	1e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	3e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	3e-04
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	3e-04
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 88.7 bits (221), Expect = 2e-24
 Identities = 24/56 (42%), Positives = 37/56 (66%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          KP QC+ C+++FS +  L  HIR HTGEKP+ C  C R+F +    ++HT++H  +
Sbjct: 33 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 81.0 bits (201), Expect = 1e-21
 Identities = 24/58 (41%), Positives = 35/58 (60%), Gaps = 2/58 (3%)

Query: 30 KPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          +P+ C    C + FS +  L +HIR+HTG+KP++C  C R F +  H+  H R HT E
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 8/29 (27%), Positives = 16/29 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEK 58
          KP  C  C + F+ + +  +H ++H  +K
Sbjct: 61 KPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 13/31 (41%), Positives = 19/31 (61%), Gaps = 2/31 (6%)

Query: 57 EKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          E+PY C    C+RRF Q   + +H R+HT +
Sbjct: 2  ERPYACPVESCDRRFSQSGSLTRHIRIHTGQ 32

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 84.9 bits (211), Expect = 4e-23
 Identities = 22/54 (40%), Positives = 33/54 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT 83
          KP QC+ C+++FS +  L  HIR HTGEKP+ C  C R+F +    ++H  +  
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH 55

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 73.3 bits (181), Expect = 2e-18
 Identities = 10/59 (16%), Positives = 19/59 (32%), Gaps = 4/59 (6%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHV---QQHTRLHTVE 85
          KP  C  C + F+ + +  +H  +     P      E    +  H+       +    E
Sbjct: 30 KPFACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLVGE 87

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 44.4 bits (106), Expect = 3e-07
 Identities = 7/32 (21%), Positives = 13/32 (40%), Gaps = 3/32 (9%)

Query: 30 KPHQCQQCLKSFSSNHQL---VQHIRVHTGEK 58
           P    +  +  S N+ L   V  ++   GE+
Sbjct: 57 LPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 43.6 bits (104), Expect = 4e-07
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 58 KPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          KP++C  C R F +  H+  H R HT E
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTGE 29

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 84.0 bits (209), Expect = 1e-22
 Identities = 18/56 (32%), Positives = 33/56 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          KP++C+ C  + + +  L +H+R+H+ E+P+KC  C    +  S +  H R HT +
Sbjct: 35 KPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGD 90

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 82.5 bits (205), Expect = 5e-22
 Identities = 24/56 (42%), Positives = 33/56 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           PH+C+ C K FS   +L  H+R HTG KPYKC  C+      S + +H R+H+ E
Sbjct: 7  GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 60.1 bits (147), Expect = 2e-13
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          +P +CQ C  +  ++ QL  H+R HTG+     
Sbjct: 63 RPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 52.4 bits (127), Expect = 3e-10
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               P+KC  C + F +   ++ H R HT  
Sbjct: 3  SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGV 34

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 82.2 bits (204), Expect = 4e-22
 Identities = 19/56 (33%), Positives = 30/56 (53%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           P +C +C  S SS   L  H R+H  ++P+KC YC    KQ S++ +H +    +
Sbjct: 8  HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD 63

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.4 bits (137), Expect = 4e-12
 Identities = 7/34 (20%), Positives = 14/34 (41%)

Query: 52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
             +   P KC+ C       + ++ H R+H  +
Sbjct: 2  SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTD 35

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 6/34 (17%), Positives = 13/34 (38%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          +P +C  C         L +H++   G+     +
Sbjct: 36 RPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 82.5 bits (205), Expect = 5e-22
 Identities = 20/57 (35%), Positives = 26/57 (45%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG 86
              C+ C K F   + L +H   H+GEKPY C  C  RFK+   +  H R H    
Sbjct: 6  SGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSV 62

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 73.7 bits (182), Expect = 1e-18
 Identities = 18/59 (30%), Positives = 28/59 (47%), Gaps = 3/59 (5%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE--KPYKCTYCERRFKQLSHVQQHT-RLHTVE 85
          KP+ C  C   F    ++  H+R H G   KPY C  C + F +  H+  H  ++H+  
Sbjct: 34 KPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP 92

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           +G     C  C + F+ + H+ +H   H+ E
Sbjct: 2  SSGSSGVACEICGKIFRDVYHLNRHKLSHSGE 33

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 17/33 (51%), Gaps = 1/33 (3%)

Query: 27 EANKPHQCQQCLKSFSSNHQLVQHI-RVHTGEK 58
             KP+ CQ C K FS    L  HI +VH+G  
Sbjct: 61 SVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 80.6 bits (200), Expect = 1e-21
 Identities = 18/57 (31%), Positives = 30/57 (52%), Gaps = 1/57 (1%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHT-RLHTVE 85
          +   C+ C ++F+    L +H R HT EKPY C  C R F +   + +H  ++H+  
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN 57

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.3 bits (98), Expect = 2e-06
 Identities = 9/30 (30%), Positives = 18/30 (60%), Gaps = 1/30 (3%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHI-RVHTGEK 58
          KP+ C  C ++F+    L++H  ++H+G  
Sbjct: 29 KPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 82.6 bits (205), Expect = 1e-21
 Identities = 23/58 (39%), Positives = 38/58 (65%), Gaps = 2/58 (3%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          + H C +C K+F  + +L +H  VHTGEKP++CT+  C +RF    +++ H R+HT +
Sbjct: 33 RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 90

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 75.6 bits (187), Expect = 5e-19
 Identities = 22/60 (36%), Positives = 35/60 (58%), Gaps = 4/60 (6%)

Query: 30  KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
           KP QC  + C K FS +  L  H+R+HTG++PY C +  C ++F Q ++++ H   H   
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 71.4 bits (176), Expect = 2e-17
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          +   C  + C K F  N  + +H+  H G + + C  C + F + S +++H  +HT E
Sbjct: 4  RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGE 60

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 52.1 bits (126), Expect = 6e-10
 Identities = 10/34 (29%), Positives = 15/34 (44%), Gaps = 2/34 (5%)

Query: 30  KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYK 61
           +P+ C    C K F+ +  L  HI  H   K  +
Sbjct: 91  RPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 6/28 (21%), Positives = 13/28 (46%), Gaps = 2/28 (7%)

Query: 57 EKPYKCTY--CERRFKQLSHVQQHTRLH 82
           +   C +  C + F+  S +++H   H
Sbjct: 3  PRTIACPHKGCTKMFRDNSAMRKHLHTH 30

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 81.4 bits (202), Expect = 2e-21
 Identities = 27/58 (46%), Positives = 39/58 (67%), Gaps = 2/58 (3%)

Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          KP+QC  + C + FS + QL +H R HTG KP++C  C+R+F +  H++ HTR HT E
Sbjct: 35 KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGE 92

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 78.3 bits (194), Expect = 4e-20
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 2/55 (3%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLH 82
           KP QC+ C + FS +  L  H R HTGEKP+ C +  C+++F +   + +H  +H
Sbjct: 65  KPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 77.6 bits (192), Expect = 9e-20
 Identities = 24/60 (40%), Positives = 32/60 (53%), Gaps = 4/60 (6%)

Query: 30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          +P  C    C K +     L  H R HTGEKPY+C +  CERRF +   +++H R HT  
Sbjct: 5  RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 47.9 bits (115), Expect = 3e-08
 Identities = 14/33 (42%), Positives = 23/33 (69%), Gaps = 2/33 (6%)

Query: 55 TGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          + ++P+ C Y  C +R+ +LSH+Q H+R HT E
Sbjct: 2  SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGE 34

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 80.2 bits (199), Expect = 2e-21
 Identities = 30/56 (53%), Positives = 37/56 (66%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          KP+ C +C K+FS +  LVQH RVHTGEKPYKC  C + F Q S +  H R+HT  
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG 68

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 59.0 bits (144), Expect = 3e-13
 Identities = 16/39 (41%), Positives = 22/39 (56%)

Query: 47 LVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                +H+GEKPY C  C + F + S + QH R+HT E
Sbjct: 2  SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 40

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 54.0 bits (131), Expect = 4e-11
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPY 60
          KP++C +C K+FS N  L+ H R+HT     
Sbjct: 41 KPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 79.8 bits (198), Expect = 3e-21
 Identities = 24/56 (42%), Positives = 36/56 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          KP++C +C  SF     L  H  VHTGEKPY+C  C  +F + ++++ HTR+H+ E
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE 71

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 60.5 bits (148), Expect = 9e-14
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 45 HQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          H    H  +   +KPYKC  C+  F+   ++  H  +HT E
Sbjct: 3  HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGE 43

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 51.7 bits (125), Expect = 2e-10
 Identities = 14/31 (45%), Positives = 19/31 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPY 60
          KP++C  C   F+    L  H R+H+GEKPY
Sbjct: 44 KPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 79.4 bits (197), Expect = 5e-21
 Identities = 27/56 (48%), Positives = 36/56 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          + ++C +C KSFS +  L +H R HTGEKPYKC  C + F Q SH+  H R+HT  
Sbjct: 17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS 72

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.4 bits (145), Expect = 3e-13
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 42 SSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          S +    +        + YKC  C + F   S + +H R HT E
Sbjct: 3  SGS--SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 44

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.1 bits (134), Expect = 2e-11
 Identities = 14/32 (43%), Positives = 19/32 (59%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYK 61
          KP++C +C K+F     L+ H RVHTG  P  
Sbjct: 45 KPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 79.8 bits (198), Expect = 7e-21
 Identities = 19/56 (33%), Positives = 27/56 (48%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          +P+ C  C K+F     L  H  +H+ EKP+KC  C + F Q   +  H  LH   
Sbjct: 44 RPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQT 99

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 79.0 bits (196), Expect = 1e-20
 Identities = 19/56 (33%), Positives = 33/56 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          K   C+ C + F+ ++ L+ H R HT E+PY C  C + F++  H++ H  +H+ E
Sbjct: 16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKE 71

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 60.1 bits (147), Expect = 3e-13
 Identities = 12/44 (27%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 42 SSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          SS             +K + C +C R F +  ++  H R HT E
Sbjct: 2  SSG--SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDE 43

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 59.4 bits (145), Expect = 7e-13
 Identities = 10/34 (29%), Positives = 14/34 (41%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
           KP +CQ+C K F  +  L  H  +H         
Sbjct: 72  KPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 78.2 bits (194), Expect = 1e-20
 Identities = 23/54 (42%), Positives = 33/54 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT 83
          +P+ CQ C K F     + +H  +HTGEKP+KC  C + F Q S++  H+R HT
Sbjct: 28 RPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 76.7 bits (190), Expect = 6e-20
 Identities = 22/53 (41%), Positives = 33/53 (62%)

Query: 33 QCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           C+ C KSF  +  L  H+ +H+  +PY C YC +RF Q S +++HT +HT E
Sbjct: 3  DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGE 55

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 42.8 bits (102), Expect = 8e-07
 Identities = 15/27 (55%), Positives = 19/27 (70%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTG 56
          KPH+CQ C K+FS +  L+ H R HTG
Sbjct: 56 KPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 81.3 bits (202), Expect = 2e-20
 Identities = 28/56 (50%), Positives = 37/56 (66%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           KP++C +C KSFS    L +H R HTGEKPYKC  C + F Q ++++ H R HT E
Sbjct: 48  KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGE 103

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 81.0 bits (201), Expect = 2e-20
 Identities = 29/56 (51%), Positives = 36/56 (64%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           KP++C +C KSFS    L  H R HTGEKPY C  C + F QL+H++ H R HT E
Sbjct: 76  KPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGE 131

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 80.2 bits (199), Expect = 4e-20
 Identities = 27/56 (48%), Positives = 34/56 (60%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          KP+ C +C KSFS +  L +H R HTGEKPYKC  C + F     + +H R HT E
Sbjct: 20 KPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGE 75

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 79.8 bits (198), Expect = 6e-20
 Identities = 27/56 (48%), Positives = 33/56 (58%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           KP+ C +C KSFS    L  H R HTGEKPYKC  C + F +  ++  H R HT E
Sbjct: 104 KPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGE 159

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 79.4 bits (197), Expect = 8e-20
 Identities = 26/56 (46%), Positives = 33/56 (58%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           KP++C +C KSFS    L  H R HTGEKPYKC  C + F +   +  H R HT +
Sbjct: 132 KPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGK 187

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 63.6 bits (156), Expect = 7e-14
 Identities = 16/46 (34%), Positives = 22/46 (47%)

Query: 40 SFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          S   +   V    +  GEKPY C  C + F +  H+ +H R HT E
Sbjct: 2  SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGE 47

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 49.7 bits (120), Expect = 1e-08
 Identities = 15/30 (50%), Positives = 19/30 (63%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
           KP++C +C KSFS    L  H R HTG+K 
Sbjct: 160 KPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 77.9 bits (193), Expect = 5e-20
 Identities = 20/57 (35%), Positives = 31/57 (54%), Gaps = 1/57 (1%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQH-TRLHTVE 85
           +   C  C ++F    +L  H+  HTGE PYKC+ C ++F Q   +Q H  +LH+  
Sbjct: 65  QVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP 121

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 75.6 bits (187), Expect = 5e-19
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 3/59 (5%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRL---HTVE 85
             +C  C K F S + L  H R HTGEKP++C  C + + +  ++ +H      +  E
Sbjct: 6  SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSE 64

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 74.8 bits (185), Expect = 1e-18
 Identities = 15/59 (25%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIR---VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          KP +C +C K +     L++H     ++  E+ + C+ C+  F++   ++ H   HT E
Sbjct: 34 KPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGE 92

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 50.6 bits (122), Expect = 2e-09
 Identities = 9/32 (28%), Positives = 16/32 (50%)

Query: 54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           +G    +C  C ++F    +++ H R HT E
Sbjct: 2  SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGE 33

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 44.4 bits (106), Expect = 5e-07
 Identities = 9/30 (30%), Positives = 15/30 (50%), Gaps = 1/30 (3%)

Query: 30  KPHQCQQCLKSFSSNHQLVQH-IRVHTGEK 58
            P++C  C + F     L  H I++H+G  
Sbjct: 93  MPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 76.7 bits (189), Expect = 5e-20
 Identities = 13/66 (19%), Positives = 23/66 (34%), Gaps = 3/66 (4%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHT---GEKPYKCTYCERRFKQLSHVQQHTRLHTVEG 86
             QC+ C  +      L  H R H        + C +C +RF++   V  H        
Sbjct: 6  SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL 65

Query: 87 VNSCLQ 92
          + +  +
Sbjct: 66 LLAPQE 71

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.3 bits (123), Expect = 6e-10
 Identities = 7/32 (21%), Positives = 12/32 (37%)

Query: 54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           +G    +C  C    +Q + +  H R H   
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAET 33

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 78.1 bits (193), Expect = 1e-19
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 2/58 (3%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
              +C +  KSF + ++LV HIRVHTGEKP+ C +  C + F +  +++ H R HT E
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 77.7 bits (192), Expect = 2e-19
 Identities = 25/60 (41%), Positives = 34/60 (56%), Gaps = 4/60 (6%)

Query: 30  KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
           KP  C    C K F+ +  L  H R HTGEKP+KC +  C+RRF   S  ++H  +HT +
Sbjct: 89  KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 77.3 bits (191), Expect = 3e-19
 Identities = 16/65 (24%), Positives = 27/65 (41%), Gaps = 9/65 (13%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYK---------CTYCERRFKQLSHVQQHTR 80
               + C ++FS+ H+LV H+ +     P +         C    + FK    +  H R
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 81 LHTVE 85
          +HT E
Sbjct: 84 VHTGE 88

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 62.7 bits (153), Expect = 9e-14
 Identities = 8/50 (16%), Positives = 15/50 (30%)

Query: 37 CLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG 86
             S     Q +    +   +       C+R F  +  +  H  +  V G
Sbjct: 3  SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGG 52

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 54.6 bits (132), Expect = 1e-10
 Identities = 10/36 (27%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 30  KPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
           KP +C+   C + F+++    +H+ VHT +K    +
Sbjct: 119 KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 78.0 bits (193), Expect = 1e-19
 Identities = 24/63 (38%), Positives = 36/63 (57%), Gaps = 7/63 (11%)

Query: 30 KPHQCQQC-----LKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLH 82
          K   C        L+ F + + LV H+R HTGEKP+KCT+  C + + +L +++ H R H
Sbjct: 33 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSH 92

Query: 83 TVE 85
          T E
Sbjct: 93 TGE 95

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 75.7 bits (187), Expect = 9e-19
 Identities = 19/64 (29%), Positives = 25/64 (39%), Gaps = 8/64 (12%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHI---RVHTGEKPYKCTYCE-----RRFKQLSHVQQHTRL 81
             +   C + F S  QLV HI    +H   K + C +       R FK    +  H R 
Sbjct: 2  TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR 61

Query: 82 HTVE 85
          HT E
Sbjct: 62 HTGE 65

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 74.2 bits (183), Expect = 4e-18
 Identities = 26/61 (42%), Positives = 34/61 (55%), Gaps = 5/61 (8%)

Query: 30  KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQH-TRLHTV 84
           KPH+C  + C KS+S    L  H+R HTGEKPY C +  C + F   S   +H  R H+ 
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125

Query: 85  E 85
           E
Sbjct: 126 E 126

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 67.6 bits (166), Expect = 1e-15
 Identities = 19/59 (32%), Positives = 31/59 (52%), Gaps = 5/59 (8%)

Query: 30  KPHQCQQ--CLKSFSSNHQLVQHI-RVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHT 83
           KP+ C+   C K+FS+     +H  R H+ EKPY C    C +R+   S +++H +   
Sbjct: 96  KPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 5/32 (15%), Positives = 9/32 (28%), Gaps = 3/32 (9%)

Query: 57 EKPYKCTYCERRFKQLSHVQQH---TRLHTVE 85
          E   +   C + F     +  H     +H   
Sbjct: 1  ETDCRWDGCSQEFDSQEQLVHHINSEHIHGER 32

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 8/29 (27%), Positives = 15/29 (51%), Gaps = 2/29 (6%)

Query: 30  KPHQCQ--QCLKSFSSNHQLVQHIRVHTG 56
           KP+ C+   C K ++    L +H++   G
Sbjct: 127 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 76.7 bits (190), Expect = 1e-19
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 1/56 (1%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          K + CQ C KSF+   Q  +H+ +H G +PY C  C ++FK   H+  H ++HT  
Sbjct: 9  KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 76.3 bits (189), Expect = 2e-19
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          +P+ C  C K F   H LV H+++HTG KPY+C  C +RF        H  + +  
Sbjct: 36 RPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--HRHVTSCT 89

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 61.7 bits (151), Expect = 1e-13
 Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSH 74
           KP++C  C K F       +H+   +  K Y+    E+   + S 
Sbjct: 64  KPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASG 106

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 48.2 bits (116), Expect = 1e-08
 Identities = 9/34 (26%), Positives = 14/34 (41%), Gaps = 1/34 (2%)

Query: 52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
             +G+K Y C  C + F   S   +H  +H   
Sbjct: 3  SGSSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGL 35

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 75.3 bits (186), Expect = 2e-19
 Identities = 14/59 (23%), Positives = 25/59 (42%), Gaps = 3/59 (5%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE--KPYKCTYCERRFKQLSHVQQHTR-LHTVE 85
          KP++C  C   F+ +  +  HI     E    + C +C+    + S +  H R  H+  
Sbjct: 14 KPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYS 72

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 66.4 bits (163), Expect = 7e-16
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 47 LVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV 87
               R H+GEKPY+C  C  RF Q   ++ H      E V
Sbjct: 3  SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENV 43

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.1 bits (126), Expect = 2e-10
 Identities = 8/35 (22%), Positives = 11/35 (31%), Gaps = 1/35 (2%)

Query: 27 EANKPHQCQQCLKSFSSNHQLVQHIR-VHTGEKPY 60
          E      C  C    +    L  H+R  H+   P 
Sbjct: 41 ENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 73.7 bits (182), Expect = 6e-19
 Identities = 9/56 (16%), Positives = 23/56 (41%), Gaps = 2/56 (3%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRV--HTGEKPYKCTYCERRFKQLSHVQQHTRLHT 83
            ++C+ C + ++      +H         K Y C +C + F +  ++  H ++  
Sbjct: 9  HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 54.9 bits (133), Expect = 1e-11
 Identities = 9/36 (25%), Positives = 14/36 (38%)

Query: 52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV 87
              GE  Y+C  C R +  +S+  +H        V
Sbjct: 3  FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNV 38

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 37.5 bits (88), Expect = 8e-05
 Identities = 6/27 (22%), Positives = 12/27 (44%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTG 56
          K + C  C K F+    +  H+++   
Sbjct: 39 KVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 72.7 bits (179), Expect = 3e-18
 Identities = 20/56 (35%), Positives = 32/56 (57%), Gaps = 2/56 (3%)

Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT 83
          KP++C  + C   F+ + +L +H R HTG KP++C  C R F +  H+  H + H 
Sbjct: 44 KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 70.3 bits (173), Expect = 4e-17
 Identities = 28/71 (39%), Positives = 39/71 (54%), Gaps = 4/71 (5%)

Query: 17 GGASSLSGGLEANKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQL 72
          G + S    LE  + H C    C K ++ +  L  H+R HTGEKPYKCT+  C+ RF + 
Sbjct: 1  GSSGSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS 60

Query: 73 SHVQQHTRLHT 83
            + +H R HT
Sbjct: 61 DELTRHYRKHT 71

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.8 bits (104), Expect = 6e-07
 Identities = 13/46 (28%), Positives = 23/46 (50%), Gaps = 4/46 (8%)

Query: 40 SFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          S  S+   ++  R+H  + P     C + + + SH++ H R HT E
Sbjct: 2  SSGSSGPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGE 43

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 72.2 bits (178), Expect = 4e-18
 Identities = 12/60 (20%), Positives = 23/60 (38%), Gaps = 4/60 (6%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE----KPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          KP+ C  C K+F     L  H + +         + C+ C + F + + + +H       
Sbjct: 14 KPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGP 73

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 62.5 bits (153), Expect = 2e-14
 Identities = 6/46 (13%), Positives = 13/46 (28%)

Query: 24 GGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRF 69
                    C +C K+F+  + + +H     G    +        
Sbjct: 40 DPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.5 bits (145), Expect = 4e-13
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 47 LVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               R HTGEKPY C++C++ F+Q   +  H + +   
Sbjct: 3  SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 41

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 71.8 bits (177), Expect = 4e-18
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 5/61 (8%)

Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRV-HTGEKPYKCTY--CERRFKQLSHVQQHTRLHTV 84
              C    C + FS+   L  H +  H  +K + C    C + F    H+++H +LH+ 
Sbjct: 6  SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 85 E 85
           
Sbjct: 66 T 66

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 62.2 bits (152), Expect = 3e-14
 Identities = 11/42 (26%), Positives = 20/42 (47%), Gaps = 2/42 (4%)

Query: 30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRF 69
          K   C +  C KSF+    L +H+++H+  + Y C +     
Sbjct: 37 KSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 46.4 bits (111), Expect = 3e-08
 Identities = 7/35 (20%), Positives = 13/35 (37%), Gaps = 3/35 (8%)

Query: 54 HTGEKPYKCTY--CERRFKQLSHVQQHTRL-HTVE 85
           +G     C +  C R F    ++  H +  H  +
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ 36

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 72.2 bits (178), Expect = 5e-18
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHT 83
                 C K+++ +  L  H+R HTGEKPY C +  C  +F +   + +H R HT
Sbjct: 6  HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 71.4 bits (176), Expect = 8e-18
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)

Query: 30 KPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
          KP+ C    C   F+ + +L +H R HTG +P++C  C+R F +  H+  H + H
Sbjct: 34 KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 43.3 bits (103), Expect = 8e-07
 Identities = 9/32 (28%), Positives = 14/32 (43%)

Query: 54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
           T         C + + + SH++ H R HT E
Sbjct: 2  RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGE 33

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 74.2 bits (183), Expect = 8e-18
 Identities = 22/60 (36%), Positives = 33/60 (55%), Gaps = 4/60 (6%)

Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          K + C    C  +++ N +L  H+  HTGEKP+ C    CE+ F  L H+ +H+  HT E
Sbjct: 11 KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 73.8 bits (182), Expect = 1e-17
 Identities = 20/60 (33%), Positives = 31/60 (51%), Gaps = 4/60 (6%)

Query: 30  KPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCT--YCERRFKQLSHVQQHTRLHTVE 85
           KP  C++  C K F+S H L +H   HTGEK + C    C+ RF   +++++H       
Sbjct: 41  KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNI 100

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 71.1 bits (175), Expect = 1e-16
 Identities = 18/61 (29%), Positives = 32/61 (52%), Gaps = 4/61 (6%)

Query: 27  EANKPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCT--YCERRFKQLSHVQQHTRLH 82
                + C  + C K+F  ++QL  H   HT + PY+C    C++RF   S +++H ++H
Sbjct: 100 IKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVH 159

Query: 83  T 83
            
Sbjct: 160 A 160

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 66.1 bits (162), Expect = 1e-14
 Identities = 14/62 (22%), Positives = 25/62 (40%), Gaps = 6/62 (9%)

Query: 30  KPHQCQQ--CLKSFSSNHQLVQHIRVHTGEK--PYKCTY--CERRFKQLSHVQQHTRLHT 83
           K   C    C   F++   + +H       K   Y C +  C + FK+ + ++ H   HT
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHT 130

Query: 84  VE 85
            +
Sbjct: 131 QQ 132

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 60.7 bits (148), Expect = 1e-12
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 30  KPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTR 80
            P++C    C K FS   +L +H +VH G    K   C    K  +   +H  
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 185

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 9/40 (22%), Positives = 16/40 (40%), Gaps = 2/40 (5%)

Query: 48 VQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          +    +    K Y C++  C   + +   +Q H   HT E
Sbjct: 1  MGEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGE 40

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 70.0 bits (172), Expect = 2e-17
 Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 2/56 (3%)

Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT 83
          +P+ C  + C + FS + +L +HIR+HTG+KP++C  C R F +  H+  H R HT
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 46.5 bits (111), Expect = 3e-08
 Identities = 12/45 (26%), Positives = 22/45 (48%), Gaps = 4/45 (8%)

Query: 41 FSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHT 83
              + L+ ++      +PY C    C+RRF +   + +H R+HT
Sbjct: 3  PHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHT 45

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 69.2 bits (170), Expect = 6e-17
 Identities = 17/52 (32%), Positives = 31/52 (59%), Gaps = 2/52 (3%)

Query: 34 CQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHT 83
           + C K+F  ++QL  H   HT + PY+C +  C++RF   S +++H ++H 
Sbjct: 6  FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 57

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 61.1 bits (149), Expect = 1e-13
 Identities = 15/53 (28%), Positives = 22/53 (41%), Gaps = 2/53 (3%)

Query: 30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTR 80
           P++C    C K FS   +L +H +VH G    K   C    K  +   +H  
Sbjct: 30 LPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 82

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 64.1 bits (157), Expect = 3e-15
 Identities = 18/41 (43%), Positives = 22/41 (53%), Gaps = 1/41 (2%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHI-RVHTGEKPYKCTYCERRF 69
          KP+ CQ C K FS    L  HI +VHT E+P+KC       
Sbjct: 11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 50.7 bits (122), Expect = 4e-10
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHT-RLHTVE 85
               +  KPY C  C + F +  H+  H  ++HT E
Sbjct: 3  SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE 39

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 61.8 bits (151), Expect = 2e-14
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                GEKPYKC  C  RF Q++H++ H  +HT  
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGS 37

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.3 bits (129), Expect = 3e-11
 Identities = 11/31 (35%), Positives = 16/31 (51%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPY 60
          KP++C+ C   F     L  H+ +HTG  P 
Sbjct: 10 KPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 61.4 bits (150), Expect = 3e-14
 Identities = 19/34 (55%), Positives = 25/34 (73%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KPH+C++C KSFS N QL+ H R+HTGE P   +
Sbjct: 11 KPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKP++C  C + F   S +  H R+HT E
Sbjct: 3  SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGE 38

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 61.0 bits (149), Expect = 4e-14
 Identities = 18/34 (52%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP +C +C KSFS + QL  H R+HTGEKP   +
Sbjct: 11 KPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 54.0 bits (131), Expect = 2e-11
 Identities = 14/36 (38%), Positives = 19/36 (52%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKP++C  C + F   S +  H R+HT E
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGE 38

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 60.6 bits (148), Expect = 4e-14
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                GEKPY C  C  RF+ L  ++ H R+HT  
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGS 37

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 54.4 bits (132), Expect = 1e-11
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPY 60
          KP+ C+ C   F     L  H+R+HTG  P 
Sbjct: 10 KPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.6 bits (148), Expect = 5e-14
 Identities = 15/34 (44%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          K + C++C KSFS    L++H R+H+GEKP   +
Sbjct: 11 KLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-11
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEK Y C  C + F +   + +H RLH+ E
Sbjct: 3  SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGE 38

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 60.2 bits (147), Expect = 7e-14
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP  C  C K+FSS   L+ H + H  EKP   +
Sbjct: 9  KPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 51.0 bits (123), Expect = 3e-10
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
             +GEKP+ C+ CE+ F   S++  H + H  E
Sbjct: 3  SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEE 36

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 59.9 bits (146), Expect = 9e-14
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
           P++C QC KSFS   +L+ H R+HT EKP   +
Sbjct: 11 NPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                G  PYKC+ CE+ F     +  H R+HT E
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTRE 38

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 60.5 bits (147), Expect = 1e-13
 Identities = 22/57 (38%), Positives = 32/57 (56%), Gaps = 4/57 (7%)

Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLH 82
          + H C    C K++  +  L  H R HTGEKP+ C++  CERRF +   + +H R H
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 43.9 bits (104), Expect = 2e-07
 Identities = 10/38 (26%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 50 HIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
               +  + + C++  C + + + SH++ HTR HT E
Sbjct: 8  PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGE 45

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 1e-13
 Identities = 17/34 (50%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+QC +C KSFS +++L QH   HT EKP   +
Sbjct: 11 KPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 7e-12
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                 GEKPY+C+ C + F     + QH   HT E
Sbjct: 2  SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTRE 38

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-13
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPYKC  C + F+  SH+ QH  +H+ E
Sbjct: 2  SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGE 38

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 4e-13
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++CQ C K+F  +  LVQH  VH+GE+P   +
Sbjct: 11 KPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 1e-13
 Identities = 16/34 (47%), Positives = 24/34 (70%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+ C++C K+F  + QL +H R+HTGEKP   +
Sbjct: 11 KPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 16/36 (44%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPY C  C + F   S +Q+H R+HT E
Sbjct: 3  SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGE 38

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-13
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K F+ N  L  H R+HTGEKP   +
Sbjct: 11 KPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-12
 Identities = 17/36 (47%), Positives = 21/36 (58%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               +GEKPYKC  C + F Q SH+  H R+HT E
Sbjct: 3  SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGE 38

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 1e-13
 Identities = 15/34 (44%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
           P++C +C K+FS  +QL+ H R H GEKP   +
Sbjct: 11 NPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 5e-12
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGE PY+C  C + F +   +  H R H  E
Sbjct: 2  SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGE 38

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 2e-13
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP +C++C K+F  N  L  H+R+HTGEKP   +
Sbjct: 11 KPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-12
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                +GEKP+KC  C + F+Q  H+  H R+HT E
Sbjct: 2  SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGE 38

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
           P++C +C K+F+   QL+ H R H GE     
Sbjct: 9  NPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 50.2 bits (121), Expect = 5e-10
 Identities = 11/34 (32%), Positives = 17/34 (50%)

Query: 52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
             +GE PY+C+ C + F +   +  H R H  E
Sbjct: 3  SGSSGENPYECSECGKAFNRKDQLISHQRTHAGE 36

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 17/34 (50%), Positives = 24/34 (70%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          +PH+C +C KSF  +  L+QH R+HTGEKP   +
Sbjct: 11 RPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 2e-12
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGE+P+KC  C + F Q +H+ QH R+HT E
Sbjct: 2  SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGE 38

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 17/36 (47%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                GEK YKC  C + F Q SH+Q H R+HT E
Sbjct: 3  SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGE 38

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 5e-13
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          K ++C  C K FS +  L  H RVHTGEKP   +
Sbjct: 11 KCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 18/34 (52%), Positives = 25/34 (73%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C++C K+FS    L+QH RVHTGEKP   +
Sbjct: 11 KPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 56.4 bits (137), Expect = 2e-12
 Identities = 17/37 (45%), Positives = 22/37 (59%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY+C  C + F Q +H+ QH R+HT E
Sbjct: 2  SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGE 38

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+ C QC K+FS   QL+ H R HTG KP   +
Sbjct: 11 KPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 13/36 (36%), Positives = 16/36 (44%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TG KPY C+ C + F   S +  H R HT  
Sbjct: 3  SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGV 38

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 18/34 (52%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP +C++C K F+ N QL  H RVHTGEKP   +
Sbjct: 11 KPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-12
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               +GEKP+KC  C +RF Q S +  H R+HT E
Sbjct: 3  SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGE 38

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 17/34 (50%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          K ++C +C K FS N QL QH ++HTGEKP   +
Sbjct: 11 KRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEK YKC  C + F + S + QH ++HT E
Sbjct: 2  SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGE 38

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+ C +C K+FSS   L+ H+R H+GEKP   +
Sbjct: 11 KPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 8e-12
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                 GEKPY C+ C + F   S++  H R H+ E
Sbjct: 2  SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGE 38

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 17/34 (50%), Positives = 21/34 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP  C  C K+FS +  L QH R+HTGEKP   +
Sbjct: 11 KPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 8e-13
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKP+ C  C + F     + QH R+HT E
Sbjct: 2  SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGE 38

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 18/34 (52%), Positives = 24/34 (70%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+QC +C K+FS   +L +H RVHTGEKP   +
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 6e-12
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TG KPY+C  C + F Q S + +H R+HT E
Sbjct: 3  SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGE 38

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C  C KSF     L  H R+HTGEKP   +
Sbjct: 11 KPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 8e-13
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPYKC  C + F+  S +  H R+HT E
Sbjct: 2  SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGE 38

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 2e-13
 Identities = 18/34 (52%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP QC++C K F+ N  L  H RVHTGEKP   +
Sbjct: 11 KPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                +GEKP++C  C +RF Q SH+  H R+HT E
Sbjct: 2  SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGE 38

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.7 bits (143), Expect = 2e-13
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C++C K F     L  H  VHTGEKP   +
Sbjct: 11 KPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.6 bits (135), Expect = 4e-12
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPYKC  C + F     +  H  +HT E
Sbjct: 3  SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGE 38

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.0 bits (144), Expect = 2e-13
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K F  N  L +H  +HTGEKP   +
Sbjct: 11 KPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-12
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPYKC  C + F++ SH+ +H  +HT E
Sbjct: 2  SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGE 38

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 14/37 (37%), Positives = 22/37 (59%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                +GEKPYKC+ C + F + +H+ +H R+HT  
Sbjct: 2  SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGY 38

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 13/34 (38%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K+F  +  L +H R+HTG +P   +
Sbjct: 11 KPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 14/34 (41%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C++C K ++S   L  H +VHTGE+P   +
Sbjct: 11 KPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 2e-12
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPYKC  C + +    ++  H ++HT E
Sbjct: 3  SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGE 38

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+ C  C K+F  +  L QH+RVHT E     +
Sbjct: 11 KPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY C  C + F   +H+ QH R+HT E
Sbjct: 2  SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQE 38

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP +C++C K F +N Q   H R H+GEKP   +
Sbjct: 11 KPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 1e-11
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                +GEKP+KC  C + F   S    H R H+ E
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGE 38

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 17/34 (50%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C  C K+FS +  L QH RVH+GEKP   +
Sbjct: 11 KPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 7e-13
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY+C  C + F   + + QH R+H+ E
Sbjct: 2  SSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGE 38

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 15/34 (44%), Positives = 20/34 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP +C +C K FS    L  H ++HTGEKP   +
Sbjct: 11 KPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 56.0 bits (136), Expect = 4e-12
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKP+KC  C + F + S +  H +LHT E
Sbjct: 2  SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGE 38

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.6 bits (143), Expect = 3e-13
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K F+ N  LV+H  +HTGEKP   +
Sbjct: 11 KPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-12
 Identities = 17/36 (47%), Positives = 21/36 (58%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPYKC  C + F Q SH+ +H  +HT E
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGE 38

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+ C++C KSF     L++H RVH+GEKP   +
Sbjct: 11 KPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 54.9 bits (133), Expect = 1e-11
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPY C  C + F+  S + +H R+H+ E
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGE 38

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 13/34 (38%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          + ++C +C K+F+    L+ H R+HTGEKP   +
Sbjct: 11 RHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 8e-12
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGE+ Y+C+ C + F + S +  H R+HT E
Sbjct: 2  SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGE 38

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K +     L  H RVHTGEK    +
Sbjct: 11 KPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-12
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               +GEKPYKC  C + +K+   +  H R+HT E
Sbjct: 3  SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGE 38

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 3e-13
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPYKC  C + F+  S++  H  +HT E
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGE 38

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 4e-13
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K+F ++  L  H  +HTGEKP   +
Sbjct: 11 KPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 4e-13
 Identities = 12/34 (35%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+ C +C K+F+    L++H ++HT +KP   +
Sbjct: 11 KPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 1e-11
 Identities = 13/36 (36%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPY C  C + F   S++ +H ++HT +
Sbjct: 3  SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQ 38

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.4 bits (142), Expect = 4e-13
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K+F  N    QH R+HTG++P   +
Sbjct: 11 KPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.7 bits (135), Expect = 5e-12
 Identities = 17/36 (47%), Positives = 19/36 (52%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPYKC  C + F   S   QH RLHT +
Sbjct: 3  SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQ 38

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 4e-13
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K F+ N  L  H R+HTG KP   +
Sbjct: 11 KPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-12
 Identities = 17/36 (47%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPYKC  C + F Q SH+  H R+HT  
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGV 38

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 4e-13
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K F+ N  L +H RVHTG KP   +
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-12
 Identities = 17/36 (47%), Positives = 21/36 (58%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPYKC  C + F Q SH+ +H R+HT  
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGG 38

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 4e-13
 Identities = 16/33 (48%), Positives = 19/33 (57%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          KP++C  C KSF    QL  H R+HTGE P   
Sbjct: 11 KPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 5e-12
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY+C+ C + F + S +  H R+HT E
Sbjct: 2  SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGE 38

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 58.3 bits (142), Expect = 5e-13
 Identities = 14/34 (41%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          +P++C +C K+F +   L+ H R HTGEKP   +
Sbjct: 11 RPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.2 bits (139), Expect = 1e-12
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TG++PY+C  C + FK  S +  H R HT E
Sbjct: 2  SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGE 38

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 5e-13
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K F  N  L +H R+HTGEKP   +
Sbjct: 11 KPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 7e-13
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPYKC  C + F+  S++ +H R+HT E
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGE 38

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 5e-13
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          K  +C +C K+F+    L  H ++HTGEKP   +
Sbjct: 11 KHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 1e-11
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TG K ++CT C + F + S +  H ++HT E
Sbjct: 2  SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGE 38

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 5e-13
 Identities = 15/34 (44%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K F+ N  L +H  +HTGEKP   +
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.7 bits (138), Expect = 2e-12
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TG+KPYKC  C + F Q SH+ +H  +HT E
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGE 38

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 5e-13
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K+F+    L QH R+HTGEKP   +
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-12
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY+C  C + F Q +++ QH R+HT E
Sbjct: 2  SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGE 38

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 5e-13
 Identities = 15/34 (44%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K F+ N  L +H  +HTGEKP   +
Sbjct: 11 KPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-12
 Identities = 17/36 (47%), Positives = 21/36 (58%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPYKC  C + F Q SH+ +H  +HT E
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGE 38

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 5e-13
 Identities = 15/33 (45%), Positives = 19/33 (57%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          KP+ C +C K+FS    L  H  +HTGEKP   
Sbjct: 11 KPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 6e-12
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TG KPY C  C + F   S +  H  +HT E
Sbjct: 2  SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGE 38

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 14/33 (42%), Positives = 18/33 (54%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          KP+ C +C K+F S   L+ H R HTGE     
Sbjct: 11 KPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.2 bits (134), Expect = 6e-12
 Identities = 15/36 (41%), Positives = 19/36 (52%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TG KPY C  C + F+  S++  HTR HT E
Sbjct: 3  SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGE 38

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          K  +C +C K+F+ +  L  H R+HTGEKP   +
Sbjct: 11 KLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                G+K +KC  C++ F Q S +  H R+HT E
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGE 38

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C  C KSF+   QL  H ++HTGEKP   +
Sbjct: 11 KPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 6e-12
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY+C+ C + F + S +  H ++HT E
Sbjct: 2  SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGE 38

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 16/34 (47%), Positives = 24/34 (70%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K+FS   +L +H R+HTGEKP   +
Sbjct: 11 KPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 4e-12
 Identities = 17/36 (47%), Positives = 21/36 (58%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPYKC  C + F Q S + +H R+HT E
Sbjct: 3  SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGE 38

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 17/34 (50%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP +C +C KS++    L QH RVHTGEKP   +
Sbjct: 11 KPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 2e-12
 Identities = 16/36 (44%), Positives = 21/36 (58%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKP+KC  C + + Q  H+ QH R+HT E
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGE 38

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          K  +C++C   FS    L  H  VH GEKP   +
Sbjct: 11 KTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 1e-11
 Identities = 12/36 (33%), Positives = 17/36 (47%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                GEK +KC  C+  F Q S ++ H  +H  E
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGE 38

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 15/34 (44%), Positives = 19/34 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP +C  C KSF    +L +H  VHT EKP   +
Sbjct: 11 KPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 8e-13
 Identities = 14/36 (38%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKP+KC  C + F   S + +H+ +HT E
Sbjct: 3  SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAE 38

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 15/34 (44%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C+ C K+F+    L QH + HTGEKP   +
Sbjct: 11 KPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY+C  C + F Q +H+ QH + HT E
Sbjct: 2  SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGE 38

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP +C  C KSF +   LV H R+HTGEK    +
Sbjct: 11 KPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 54.9 bits (133), Expect = 9e-12
 Identities = 13/36 (36%), Positives = 22/36 (61%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TG+KP++CT+C + F+   ++  H R+HT E
Sbjct: 3  SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGE 38

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 6e-13
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
           P  C +C K F+    L+ H ++HTGE+P   +
Sbjct: 11 NPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 5e-11
 Identities = 11/36 (30%), Positives = 19/36 (52%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGE P+ C+ C + F   +++  H ++HT E
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGE 38

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 7e-13
 Identities = 14/33 (42%), Positives = 21/33 (63%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          KP++C +C K+F+    L  H ++HTGEKP   
Sbjct: 11 KPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 7e-12
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY+C  C + F   S++  H ++HT E
Sbjct: 2  SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGE 38

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 7e-13
 Identities = 16/34 (47%), Positives = 23/34 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+ C  C K+F  + +LV+H R+HTGEKP   +
Sbjct: 11 KPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 2e-12
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                +GEKPY C YC + F   + + +H R+HT E
Sbjct: 2  SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGE 38

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 8e-13
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C  C K+FS    L  H R+H+G+KP   +
Sbjct: 11 KPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 4e-12
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY+C+ C + F     +  H R+H+ +
Sbjct: 2  SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGK 38

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 9e-13
 Identities = 15/34 (44%), Positives = 22/34 (64%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP +C +C K+F++   L+ H R HTGEKP   +
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 2e-11
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKP++C+ C++ F   S++  H R HT E
Sbjct: 3  SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGE 38

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 9e-13
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+ C +C KSF     L +H R+HTGEKP   +
Sbjct: 11 KPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 9e-13
 Identities = 17/37 (45%), Positives = 21/37 (56%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY C  C + F Q SH+ +H R+HT E
Sbjct: 2  SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGE 38

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 9e-13
 Identities = 10/34 (29%), Positives = 20/34 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          +P+ C +C K+F  +  L++H++ H  EK    +
Sbjct: 11 RPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.4 bits (137), Expect = 3e-12
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                +GE+PY C  C + F + SH+ +H + H  E
Sbjct: 2  SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFRE 38

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 9e-13
 Identities = 12/34 (35%), Positives = 18/34 (52%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP +C +C K+F    QL+ H R H  +K    +
Sbjct: 11 KPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 14/36 (38%), Positives = 17/36 (47%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKP KCT C + F   S +  H R H  +
Sbjct: 3  SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDD 38

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 9e-13
 Identities = 15/34 (44%), Positives = 21/34 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C QC K+FS    L  H  +HTG+KP   +
Sbjct: 11 KPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 5e-12
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPY+C  C + F   S +  H  +HT +
Sbjct: 2  SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGK 38

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-12
 Identities = 13/33 (39%), Positives = 21/33 (63%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          +P+ C  C K+F+    L++H ++HTGEKP   
Sbjct: 11 RPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.7 bits (138), Expect = 2e-12
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGE+PY CT C + F   S++ +H ++HT E
Sbjct: 2  SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGE 38

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-12
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C+ C K ++    L  H RVH GEK    +
Sbjct: 11 KPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                + EKPYKC  C + + +  ++  H R+H  E
Sbjct: 2  SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGE 38

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 57.8 bits (139), Expect = 1e-12
 Identities = 17/54 (31%), Positives = 26/54 (48%)

Query: 32 HQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          + C++C         L +HIR HT  +PY CTYC   FK   ++ +H +     
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS 55

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.8 bits (87), Expect = 6e-05
 Identities = 8/29 (27%), Positives = 14/29 (48%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEK 58
          +P+ C  C  SF +   L +H++     K
Sbjct: 28 RPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-12
 Identities = 15/33 (45%), Positives = 21/33 (63%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          KP++C++C K+F     L QH RVHTGE+    
Sbjct: 11 KPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 2e-11
 Identities = 15/36 (41%), Positives = 22/36 (61%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               +G+KPY+C  C + F Q+ H+ QH R+HT E
Sbjct: 3  SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGE 38

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-12
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          +P +C +C K F     L  H+R+H+ EK    +
Sbjct: 11 RPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 6e-12
 Identities = 14/36 (38%), Positives = 21/36 (58%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               +GE+P+KC  C + F + SH+  H RLH+ E
Sbjct: 3  SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSRE 38

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 1e-12
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          + ++C +C K+F     L  H R+H GEKP   +
Sbjct: 11 RHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 6e-12
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGE+ Y+C+ C + F Q S +  H R+H  E
Sbjct: 2  SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGE 38

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-12
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C  C KSF+   +L  H + HTGE+    +
Sbjct: 11 KPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPYKC+ C + F   S ++ H + HT E
Sbjct: 3  SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGE 38

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-12
 Identities = 13/34 (38%), Positives = 20/34 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C +C K+F +   L  H   H+GEKP   +
Sbjct: 11 KPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPYKC  C + F+  S +  H   H+ E
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGE 38

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 1e-12
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP+ C +C K+FS    L  H R HTGEKP   +
Sbjct: 11 KPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 6e-12
 Identities = 15/36 (41%), Positives = 18/36 (50%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               +GEKPY C  C + F Q S +  H R HT E
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGE 38

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.7 bits (138), Expect = 2e-12
 Identities = 12/34 (35%), Positives = 19/34 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP++C  C K+F+    L  H + HTGE+    +
Sbjct: 11 KPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 7e-12
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKPYKC+ C + F + S +  H + HT E
Sbjct: 2  SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGE 38

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.4 bits (137), Expect = 2e-12
 Identities = 11/42 (26%), Positives = 19/42 (45%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
                T  K Y C  C + F ++ H+ +H ++HT +   S 
Sbjct: 2  SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.3 bits (108), Expect = 4e-08
 Identities = 9/33 (27%), Positives = 17/33 (51%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          K + C +C K+F+    L +H ++HT +     
Sbjct: 11 KSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.9 bits (136), Expect = 3e-12
 Identities = 13/33 (39%), Positives = 20/33 (60%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          KP++C +C K+F++   L+ H R HTGE     
Sbjct: 11 KPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.9 bits (136), Expect = 3e-12
 Identities = 15/36 (41%), Positives = 20/36 (55%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               TGEKPY+C  C++ F   S++  H R HT E
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGE 38

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 16/34 (47%), Positives = 21/34 (61%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          K HQC +C + F+    L QH R+HTGEKP   +
Sbjct: 11 KSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.2 bits (134), Expect = 7e-12
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                +  K ++C  C R F   SH+ QH R+HT E
Sbjct: 2  SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGE 38

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.0 bits (136), Expect = 3e-12
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
           P++C +C K FS   QLV H + H+G+     
Sbjct: 11 NPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.6 bits (122), Expect = 4e-10
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGE PY+C  C + F +   +  H + H+ +
Sbjct: 2  SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQ 38

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.7 bits (135), Expect = 5e-12
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          KP QC++C  +FS +  L +H+R H    P   
Sbjct: 11 KPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                TGEKP++C  C   F     + +H R H   
Sbjct: 2  SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERT 38

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 55.2 bits (134), Expect = 6e-12
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          + H+C  C K F      +QH R+HTGEKP   +
Sbjct: 11 RGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 2e-11
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                 GE+ ++C+ C + F Q S+  QH R+HT E
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGE 38

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.9 bits (133), Expect = 7e-12
 Identities = 13/36 (36%), Positives = 17/36 (47%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                GEKPY+C  C + F Q   +  H R+HT  
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGS 37

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.5 bits (132), Expect = 1e-11
 Identities = 17/31 (54%), Positives = 21/31 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPY 60
          KP++C QC K+FS    L+ HIRVHTG  P 
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 54.9 bits (133), Expect = 9e-12
 Identities = 16/35 (45%), Positives = 23/35 (65%), Gaps = 1/35 (2%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIR-VHTGEKPYKCT 63
          KP++C +C K+F  N  L++H R  HTGEKP   +
Sbjct: 11 KPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 51.4 bits (124), Expect = 2e-10
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRL-HTVE 85
                TG+KPY+C  C + F Q + + +H R  HT E
Sbjct: 2  SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGE 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 54.1 bits (131), Expect = 1e-11
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPY 60
          + ++CQ+C KSF     L  H R+HTG  P 
Sbjct: 9  RVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 50.3 bits (121), Expect = 6e-10
 Identities = 10/34 (29%), Positives = 18/34 (52%)

Query: 52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
             +G++ Y+C  C + F+Q   +  H R+HT  
Sbjct: 3  SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGS 36

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.5 bits (129), Expect = 2e-11
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
             +GEKPY C  C+  F   + + QH ++HTV+   S 
Sbjct: 3  SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.6 bits (124), Expect = 2e-10
 Identities = 13/33 (39%), Positives = 22/33 (66%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          KP+ C +C ++FS N++LVQH ++HT +     
Sbjct: 9  KPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.7 bits (130), Expect = 3e-11
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC 62
          KP++C +C K+F     L+ H R H G      
Sbjct: 11 KPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 5e-11
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
               +GEKPY+C  C + F   S +  H R H      S 
Sbjct: 3  SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 53.1 bits (128), Expect = 5e-11
 Identities = 13/36 (36%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 50 HIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHT 83
               TGEKP+ CT+  C  RF +   + +H R H+
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS 38

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 48.8 bits (117), Expect = 2e-09
 Identities = 13/36 (36%), Positives = 18/36 (50%), Gaps = 2/36 (5%)

Query: 30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          KP  C    C   FS + +L +H R H+G KP   +
Sbjct: 11 KPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.2 bits (126), Expect = 9e-11
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          K H C +C K+F     L  H RVH GEK    +
Sbjct: 11 KSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.7 bits (122), Expect = 4e-10
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
               +GEK + C  C + F  +S ++ H R+H  E
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGE 38

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 51.5 bits (124), Expect = 2e-10
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYK 61
           P+ C QC KSF+    L  H R  +   P  
Sbjct: 10 TPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 46.5 bits (111), Expect = 1e-08
 Identities = 10/36 (27%), Positives = 13/36 (36%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                GE PY C  C + F Q   +  H R  +  
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQS 37

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 52.7 bits (126), Expect = 2e-10
 Identities = 16/63 (25%), Positives = 25/63 (39%), Gaps = 9/63 (14%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHI-RVHTGEKPYK--------CTYCERRFKQLSHVQQHTR 80
               + C ++FS+ H+LV H+   H G             C    + FK    +  H R
Sbjct: 24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIR 83

Query: 81 LHT 83
          +HT
Sbjct: 84 VHT 86

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 51.5 bits (123), Expect = 5e-10
 Identities = 15/30 (50%), Positives = 20/30 (66%)

Query: 34 CQQCLKSFSSNHQLVQHIRVHTGEKPYKCT 63
          C +  KSF + ++LV HIRVHTGEK    +
Sbjct: 65 CPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 50.4 bits (121), Expect = 4e-10
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV 84
            R  TG KP++C  C+R F +  H+  H + H +
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 34.2 bits (79), Expect = 8e-04
 Identities = 11/25 (44%), Positives = 14/25 (56%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVH 54
          KP QC  C +SFS +  L  H + H
Sbjct: 10 KPFQCPDCDRSFSRSDHLALHRKRH 34

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 50.7 bits (121), Expect = 5e-10
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC 65
           K   C+ C K F   + L +H   H+GEKPY     
Sbjct: 10 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 39.2 bits (91), Expect = 1e-05
 Identities = 9/39 (23%), Positives = 15/39 (38%)

Query: 52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
                K   C  C + F+ + H+ +H   H+ E   S 
Sbjct: 5  SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 51.5 bits (122), Expect = 1e-09
 Identities = 17/56 (30%), Positives = 21/56 (37%), Gaps = 2/56 (3%)

Query: 25  GLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTR 80
             +A     C  CL  FSS+  L QHIR    E    C  C++ F        H  
Sbjct: 68  ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVC 121

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 49.1 bits (117), Expect = 2e-09
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
                 GE P+KC+ C+R F Q +++ QH R H  +
Sbjct: 2  SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARK 38

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.6 bits (95), Expect = 3e-06
 Identities = 10/30 (33%), Positives = 16/30 (53%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKP 59
           P +C +C + F+  + LVQH R H  +  
Sbjct: 11 NPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 43.9 bits (103), Expect = 3e-07
 Identities = 7/56 (12%), Positives = 17/56 (30%), Gaps = 7/56 (12%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          +  +C +C   F             +  K   C  C +   Q + + +     + +
Sbjct: 17 RSQKCSKCGIIFI-------RRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGK 65

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.0 bits (98), Expect = 2e-06
 Identities = 9/44 (20%), Positives = 14/44 (31%)

Query: 17 GGASSLSGGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPY 60
          G        L   K   C++C K       L +     +G+K  
Sbjct: 25 GIIFIRRSTLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.8 bits (95), Expect = 6e-06
 Identities = 8/36 (22%), Positives = 18/36 (50%)

Query: 43 SNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQH 78
          S+    +  ++H G++  KC+ C   F + S + + 
Sbjct: 2  SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR 37

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 41.1 bits (97), Expect = 1e-06
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 58 KPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          + + C  C R F +  H+++H R HT E
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNE 28

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A Length = 29

 Score = 37.3 bits (87), Expect = 4e-05
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEK 58
          +   C+ C ++F+    L +H R HT EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.1 bits (98), Expect = 4e-06
 Identities = 11/67 (16%), Positives = 22/67 (32%), Gaps = 1/67 (1%)

Query: 42  SSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD 101
           SS      +  + TG   ++C  C   +  L  +  H    T    +   +  +   +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRW 60

Query: 102 LKDEPRN 108
            K   R+
Sbjct: 61  SKPRKRS 67

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.6 bits (89), Expect = 6e-05
 Identities = 10/52 (19%), Positives = 18/52 (34%)

Query: 27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQH 78
          + ++         S      L++       +K  KC YC   F+ L  +  H
Sbjct: 48 DNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 38.6 bits (89), Expect = 6e-05
 Identities = 10/66 (15%), Positives = 23/66 (34%), Gaps = 1/66 (1%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
             +C+ C  ++ +  +L  H+   TG         +    +     +   L  +EG   
Sbjct: 18 SKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKED 76

Query: 90 CLQILS 95
            ++L 
Sbjct: 77 AQKVLK 82

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 37.6 bits (88), Expect = 3e-05
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRVHTGEK 58
          +P  C    C K F+ + +L +H R HTGEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 38.3 bits (88), Expect = 8e-05
 Identities = 17/66 (25%), Positives = 25/66 (37%), Gaps = 3/66 (4%)

Query: 27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG 86
          E  + +QC+ C    SS  +   H R+        C YC  RF      Q+H        
Sbjct: 12 ENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEH-ESKCEYK 68

Query: 87 VNSCLQ 92
            +CL+
Sbjct: 69 KLTCLE 74

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 36.4 bits (83), Expect = 4e-04
 Identities = 12/46 (26%), Positives = 15/46 (32%), Gaps = 1/46 (2%)

Query: 33 QCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQH 78
           C  C   F S     +H       K   C  C R FK    + +H
Sbjct: 44 VCPYCSLRFFSPELKQEH-ESKCEYKKLTCLECMRTFKSSFSIWRH 88

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 39.5 bits (91), Expect = 1e-04
 Identities = 8/60 (13%), Positives = 15/60 (25%)

Query: 30  KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS 89
                +      S +   V      +    Y+C  C         +  H   H + G  +
Sbjct: 151 STRIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASHGLHGNMT 210

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 10/33 (30%), Positives = 17/33 (51%), Gaps = 2/33 (6%)

Query: 55 TGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
            +K + C    C + + + SH++ H R HT E
Sbjct: 4  GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE 36

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 35.0 bits (81), Expect = 3e-04
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 2/31 (6%)

Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRVHTGEK 58
          K H C  Q C K +     L  H+R HTGE+
Sbjct: 7  KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens} Length = 30

 Score = 35.1 bits (80), Expect = 3e-04
 Identities = 13/29 (44%), Positives = 19/29 (65%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEK 58
          KP+ C  C + F+    L +H+R+HTGEK
Sbjct: 2  KPYVCIHCQRQFADPGALQRHVRIHTGEK 30

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 45

 Score = 35.7 bits (81), Expect = 3e-04
 Identities = 13/29 (44%), Positives = 16/29 (55%)

Query: 54 HTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
           +GEKPY C  C  RFK+   +  H R H
Sbjct: 5  SSGEKPYSCPVCGLRFKRKDRMSYHVRSH 33

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 34.8 bits (79), Expect = 6e-04
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHT 83
             EK +KC  CE+ F    ++ QH R+HT
Sbjct: 7  GQKEKCFKCNKCEKTFSCSKYLTQHERIHT 36

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	129
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.83
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.79
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.78
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.78
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.78
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.77
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.75
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.74
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.74
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.73
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.73
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.72
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.72
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.72
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.72
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.69
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.69
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.69
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.68
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.67
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.67
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.67
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.67
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.67
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.65
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.64
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.64
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.63
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.63
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.62
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.61
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.57
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.56
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.56
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.54
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.53
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.46
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.46
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.46
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.43
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.43
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.42
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.42
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.42
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.42
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.4
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.39
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.39
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.39
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.38
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.38
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.37
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.37
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.36
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.35
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.35
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.34
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.34
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.34
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.34
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.34
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.33
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.33
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.33
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.33
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.33
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.33
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.33
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.32
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.32
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.32
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.32
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.32
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.32
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.32
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.3
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.29
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.29
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.29
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.28
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.28
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.27
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.26
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.26
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.24
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.23
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.22
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.22
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.21
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.21
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.2
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.19
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.19
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.19
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.19
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.19
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.17
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.17
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.16
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.15
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.15
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.14
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.14
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.14
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.12
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.11
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.11
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.1
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.1
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.08
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.06
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.06
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.99
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.95
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.95
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.93
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.93
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.93
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.92
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.92
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.92
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.92
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.91
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.91
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.91
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.9
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.9
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.9
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.89
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.89
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.88
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.88
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.88
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.88
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.87
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.87
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.86
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.86
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.86
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.85
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	98.85
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.85
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.83
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.81
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.81
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	98.79
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.78
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.76
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.76
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.76
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.73
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.73
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.73
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.73
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.72
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.72
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.72
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.71
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.71
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.7
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.69
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.69
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.69
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.68
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.68
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.68
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.68
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.68
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.68
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.67
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.67
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.67
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.66
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.65
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.65
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.64
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.64
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.63
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.61
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.61
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.6
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.58
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.56
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.56
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.53
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.52
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.5
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.49
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.46
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.44
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.43
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.42
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.42
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.41
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.38
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.36
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.36
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.31
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.3
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.3
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.29
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.27
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.25
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.22
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.21
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.19
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.19
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.19
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.17
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.17
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.17
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.16
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.14
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.13
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.12
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.11
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.39
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.1
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.07
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.07
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.34
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.05
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.05
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.05
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.05
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.04
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.04
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.03
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.03
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.02
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.02
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.01
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.0
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.99
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.98
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.2
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.18
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.93
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.89
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.04
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.02
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.69
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.67
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.51
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.9
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.79
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.76
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.67
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	93.83
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	93.68
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	92.25
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	91.44
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	90.11
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	89.02
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	88.57
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	87.85
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	83.58
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	82.79
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	82.52
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	82.22
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	82.07
1twf_L	70	ABC10-alpha, DNA-directed RNA polymerases I, II, a	80.81
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	80.77
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	80.72
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	80.23

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.83  E-value=3.1e-22  Score=124.95  Aligned_cols=79  Identities=27%  Similarity=0.473  Sum_probs=75.6

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                      .++++|.|.+|++.|.....|..|+++|.+++||.|.+|++.|.....|..|+++|++++||.|.+|++.|.+.+ |..|
T Consensus        18 ~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H   97 (133)
T 2lt7_A           18 DGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSH   97 (133)
T ss_dssp             TTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHH
Confidence            467899999999999999999999999999999999999999999999999999999999999999999999995 7776

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.79  E-value=1.2e-20  Score=114.74  Aligned_cols=101  Identities=31%  Similarity=0.546  Sum_probs=91.1

Q ss_pred             CCCCccccc--chhhccChHHHHHHHhhcCCCCceecc--cchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-c
Q psy553           28 ANKPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCT--YCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-L  102 (129)
Q Consensus        28 ~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~C~--~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l  102 (129)
                      ++++|.|..  |++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|+++|.++++|.|.+|++.|.... |
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            468999997  999999999999999999999999999  79999999999999999999999999999999999985 6


Q ss_pred             CcC----CCCCCeeE-------eeccccccchhhCCC
Q psy553          103 KDE----PRNRNYVV-------RFSWWDDLRPLLGAS  128 (129)
Q Consensus       103 ~~h----~~~~~~~~-------~~~~~~~l~~~~~~~  128 (129)
                      ..|    .++++|.|       .|...++|..|+.++
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            665    56788887       778888999998753

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.78  E-value=3.7e-20  Score=110.68  Aligned_cols=81  Identities=27%  Similarity=0.544  Sum_probs=75.6

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKD  104 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~  104 (129)
                      ...+++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.+.. |..
T Consensus        12 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~   91 (106)
T 2ee8_A           12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAV   91 (106)
T ss_dssp             CCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHH
T ss_pred             cCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHH
Confidence            3457889999999999999999999999999999999999999999999999999999999999999999999985 777


Q ss_pred             CC
Q psy553          105 EP  106 (129)
Q Consensus       105 h~  106 (129)
                      |+
T Consensus        92 H~   93 (106)
T 2ee8_A           92 HK   93 (106)
T ss_dssp             HH
T ss_pred             HH
Confidence            64

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=5.8e-20  Score=107.92  Aligned_cols=82  Identities=33%  Similarity=0.560  Sum_probs=76.5

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                      .++++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.... |..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            457899999999999999999999999999999999999999999999999999999999999999999999985 8777


Q ss_pred             CCC
Q psy553          106 PRN  108 (129)
Q Consensus       106 ~~~  108 (129)
                      ++.
T Consensus        84 ~~~   86 (96)
T 2dmd_A           84 LRS   86 (96)
T ss_dssp             HTT
T ss_pred             HHH
Confidence            543

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.78  E-value=6.7e-20  Score=120.01  Aligned_cols=100  Identities=37%  Similarity=0.613  Sum_probs=78.2

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC--
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE--  105 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h--  105 (129)
                      +++|.|..|++.|.....|..|+..|.+.++|.|.+|++.|.....|..|+++|+++++|.|.+|++.|...+ |..|  
T Consensus        75 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~  154 (190)
T 2i13_A           75 EKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQR  154 (190)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHH
T ss_pred             CCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHH
Confidence            4677888888888888888888888887888888888888888888888888888888888888888888774 5554  


Q ss_pred             --CCCCCeeE-----eeccccccchhhCCC
Q psy553          106 --PRNRNYVV-----RFSWWDDLRPLLGAS  128 (129)
Q Consensus       106 --~~~~~~~~-----~~~~~~~l~~~~~~~  128 (129)
                        .++++|.|     .|...++|..|+..+
T Consensus       155 ~H~~~~~~~C~~C~~~f~~~~~L~~H~~~H  184 (190)
T 2i13_A          155 THTGEKPYKCPECGKSFSRRDALNVHQRTH  184 (190)
T ss_dssp             HHHCCCCEECTTTCCEESSHHHHHHHHTTC
T ss_pred             hcCCCCCeECCCCCCccCCHHHHHHHHHhc
Confidence              55777775     777778888887654

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=1e-19  Score=111.26  Aligned_cols=100  Identities=25%  Similarity=0.402  Sum_probs=89.2

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhh---hcCCCccchhhhhhhhhccc-c
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRL---HTVEGVNSCLQILSLWIQLD-L  102 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~---h~~~~~y~C~~C~~~f~~~~-l  102 (129)
                      .++++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|+..   +.++++|.|.+|++.|.... |
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l   82 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL   82 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHH
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHH
Confidence            4568899999999999999999999999999999999999999999999999985   57899999999999999985 6


Q ss_pred             CcC----CCCCCeeE-----eeccccccchhhC
Q psy553          103 KDE----PRNRNYVV-----RFSWWDDLRPLLG  126 (129)
Q Consensus       103 ~~h----~~~~~~~~-----~~~~~~~l~~~~~  126 (129)
                      ..|    .++++|.|     .|...++|..|+.
T Consensus        83 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           83 RLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             HHHHHHHSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             HHHHHHcCCCCCccCCCccchhCCHHHHHHHHH
Confidence            665    66888986     7888889999985

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.75  E-value=3e-19  Score=104.66  Aligned_cols=80  Identities=29%  Similarity=0.463  Sum_probs=75.3

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCC--Cccchhhhhhhhhccc-cC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE--GVNSCLQILSLWIQLD-LK  103 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~--~~y~C~~C~~~f~~~~-l~  103 (129)
                      .++++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|++.|.++  ++|.|.+|++.|.+.. |.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            45789999999999999999999999999999999999999999999999999999987  9999999999999986 87


Q ss_pred             cCC
Q psy553          104 DEP  106 (129)
Q Consensus       104 ~h~  106 (129)
                      .|+
T Consensus        83 ~H~   85 (95)
T 2yt9_A           83 GHI   85 (95)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            775

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=1.2e-18  Score=94.36  Aligned_cols=58  Identities=29%  Similarity=0.654  Sum_probs=55.3

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      ++||.|.+|++.|.....|..|+++|++++||.|.+|++.|.....|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999999999999999999999999874

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=3.9e-19  Score=106.89  Aligned_cols=81  Identities=30%  Similarity=0.543  Sum_probs=76.1

Q ss_pred             CCCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cC
Q psy553           25 GLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LK  103 (129)
Q Consensus        25 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~  103 (129)
                      +..++++|.| .|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.+.+ |.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            3456789999 999999999999999999999999999999999999999999999999999999999999999986 88


Q ss_pred             cCC
Q psy553          104 DEP  106 (129)
Q Consensus       104 ~h~  106 (129)
                      .|+
T Consensus        83 ~H~   85 (110)
T 2csh_A           83 RHV   85 (110)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            885

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.74  E-value=5.9e-19  Score=104.23  Aligned_cols=87  Identities=34%  Similarity=0.558  Sum_probs=77.8

Q ss_pred             CCCCCCCCCCCCccccc--chhhccChHHHHHHHhhcCCCCceecc--cchhhcCCchhHHHhhhhhcCCCccchhhhhh
Q psy553           20 SSLSGGLEANKPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCT--YCERRFKQLSHVQQHTRLHTVEGVNSCLQILS   95 (129)
Q Consensus        20 ~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~C~--~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~   95 (129)
                      .+........++|.|..  |++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|+++|+++++|.|.+|++
T Consensus         4 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   83 (100)
T 2ebt_A            4 GSSGPDLEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNR   83 (100)
T ss_dssp             CCCCCCCCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCC
T ss_pred             CCCCcccccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcC
Confidence            33444455678999997  999999999999999999999999996  69999999999999999999999999999999


Q ss_pred             hhhccc-cCcCC
Q psy553           96 LWIQLD-LKDEP  106 (129)
Q Consensus        96 ~f~~~~-l~~h~  106 (129)
                      .|.... |..|+
T Consensus        84 ~f~~~~~l~~H~   95 (100)
T 2ebt_A           84 SFSRSDHLALHM   95 (100)
T ss_dssp             BCSSHHHHHHHH
T ss_pred             ccCCHHHHHHHH
Confidence            999986 88775

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.73  E-value=2.6e-19  Score=103.89  Aligned_cols=79  Identities=34%  Similarity=0.667  Sum_probs=73.6

Q ss_pred             CCCcccc--cchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC
Q psy553           29 NKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        29 ~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                      +++|.|.  .|++.|.....|..|++.|.+.++|.|..|++.|.....|..|+++|.++++|.|.+|++.|...+ |..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            5789998  599999999999999999999999999999999999999999999999999999999999999986 8777


Q ss_pred             CC
Q psy553          106 PR  107 (129)
Q Consensus       106 ~~  107 (129)
                      ++
T Consensus        82 ~~   83 (90)
T 1a1h_A           82 TK   83 (90)
T ss_dssp             HG
T ss_pred             HH
Confidence            53

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=3.9e-19  Score=101.37  Aligned_cols=76  Identities=33%  Similarity=0.639  Sum_probs=72.5

Q ss_pred             CcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      ||.|..|++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|.++++|.|.+|++.|.+.+ |..|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   77 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHS   77 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999999999999999999999986 88775

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=7.3e-19  Score=105.33  Aligned_cols=79  Identities=22%  Similarity=0.308  Sum_probs=72.0

Q ss_pred             CCCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cC
Q psy553           25 GLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LK  103 (129)
Q Consensus        25 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~  103 (129)
                      ...++++|.|..|++.|.....|..|++.|.  ++|.|.+|++.|.....|..|+. |.+++||.|.+|++.|.+.. |.
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~--~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~   86 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLCR--NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIW   86 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH--HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHCC--CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHH
Confidence            4456789999999999999999999999984  78999999999999999999996 99999999999999999985 77


Q ss_pred             cCC
Q psy553          104 DEP  106 (129)
Q Consensus       104 ~h~  106 (129)
                      .|+
T Consensus        87 ~H~   89 (107)
T 1wjp_A           87 RHQ   89 (107)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            664

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.72  E-value=4.2e-19  Score=108.74  Aligned_cols=98  Identities=23%  Similarity=0.419  Sum_probs=73.0

Q ss_pred             CCCcccc--cchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh--hhhhhhccc-cC
Q psy553           29 NKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ--ILSLWIQLD-LK  103 (129)
Q Consensus        29 ~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~--C~~~f~~~~-l~  103 (129)
                      +++|.|.  .|++.|.....|..|++.| +.++|.|.+|++.|.....|..|++.|.++++|.|.+  |++.|.... |.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4677887  6888888888888888877 6677888888888888888888888888888888865  888887774 55


Q ss_pred             cC----CCCCCeeE-------eeccccccchhhCC
Q psy553          104 DE----PRNRNYVV-------RFSWWDDLRPLLGA  127 (129)
Q Consensus       104 ~h----~~~~~~~~-------~~~~~~~l~~~~~~  127 (129)
                      .|    .++++|.|       .|...++|..|+.+
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  116 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILT  116 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHH
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHH
Confidence            54    45667776       45667777777653

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=3.2e-18  Score=97.03  Aligned_cols=71  Identities=23%  Similarity=0.422  Sum_probs=67.0

Q ss_pred             CCCCCccccc--chhhccChHHHHHHHh-hcCCCCceeccc--chhhcCCchhHHHhhhhhcCCCccchhhhhhhh
Q psy553           27 EANKPHQCQQ--CLKSFSSNHQLVQHIR-VHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVEGVNSCLQILSLW   97 (129)
Q Consensus        27 ~~~~~~~C~~--C~~~f~~~~~l~~h~~-~h~~~~~~~C~~--c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f   97 (129)
                      .++++|.|..  |++.|.....|..|++ .|.+.++|.|.+  |++.|.....|..|+++|++++||.|.+|++.|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            3468899987  9999999999999999 799999999998  999999999999999999999999999999987

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.6e-17  Score=93.84  Aligned_cols=67  Identities=43%  Similarity=0.713  Sum_probs=63.1

Q ss_pred             CCCCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccch
Q psy553           24 GGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC   90 (129)
Q Consensus        24 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C   90 (129)
                      ....++++|.|..|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus        11 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           11 WQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3445678999999999999999999999999999999999999999999999999999999999988

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.72  E-value=1.7e-18  Score=113.34  Aligned_cols=80  Identities=39%  Similarity=0.649  Sum_probs=75.4

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEPR  107 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~~  107 (129)
                      +++|.|..|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|++++||.|.+|++.|.... |..|++
T Consensus       103 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~  182 (190)
T 2i13_A          103 EKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR  182 (190)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHT
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999999999999999999999999985 777754


Q ss_pred             C
Q psy553          108 N  108 (129)
Q Consensus       108 ~  108 (129)
                      .
T Consensus       183 ~  183 (190)
T 2i13_A          183 T  183 (190)
T ss_dssp             T
T ss_pred             h
Confidence            3

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.69  E-value=3.3e-18  Score=103.85  Aligned_cols=79  Identities=39%  Similarity=0.707  Sum_probs=74.4

Q ss_pred             CCCcccc--cchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccch--hhhhhhhhccc-cC
Q psy553           29 NKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC--LQILSLWIQLD-LK  103 (129)
Q Consensus        29 ~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C--~~C~~~f~~~~-l~  103 (129)
                      +++|.|.  .|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|+++|+++++|.|  +.|++.|.... |.
T Consensus        34 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~  113 (119)
T 2jp9_A           34 EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELV  113 (119)
T ss_dssp             TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHH
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHH
Confidence            5789999  7999999999999999999999999999999999999999999999999999999  89999999996 88


Q ss_pred             cCCC
Q psy553          104 DEPR  107 (129)
Q Consensus       104 ~h~~  107 (129)
                      .|++
T Consensus       114 ~H~~  117 (119)
T 2jp9_A          114 RHHN  117 (119)
T ss_dssp             HHHH
T ss_pred             HHHh
Confidence            8753

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=1e-17  Score=102.24  Aligned_cols=79  Identities=23%  Similarity=0.469  Sum_probs=73.4

Q ss_pred             CCCcccccchhhccChHHHHHHHhh---cCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCc
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRV---HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKD  104 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~---h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~  104 (129)
                      +++|.|..|++.|.....|..|+..   +.+.++|.|.+|++.|.....|..|+++|.+++||.|.+|++.|.+.. |..
T Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  112 (124)
T 2dlq_A           33 EKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQS  112 (124)
T ss_dssp             CCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHH
T ss_pred             CCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHH
Confidence            5789999999999999999999985   578899999999999999999999999999999999999999999996 887


Q ss_pred             CCC
Q psy553          105 EPR  107 (129)
Q Consensus       105 h~~  107 (129)
                      |+.
T Consensus       113 H~~  115 (124)
T 2dlq_A          113 HMI  115 (124)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            753

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.69  E-value=3.5e-18  Score=98.97  Aligned_cols=77  Identities=32%  Similarity=0.624  Sum_probs=72.2

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      ++||.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|++.|.+ .+|.|..|++.|.... |..|.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~   78 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEV   78 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHH
Confidence            47899999999999999999999999999999999999999999999999999985 7999999999999995 87774

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.68  E-value=1.2e-17  Score=105.70  Aligned_cols=115  Identities=25%  Similarity=0.453  Sum_probs=92.6

Q ss_pred             hHHHHHHHhhhccccCCCCCCCCCCCCCCccccc-----chhhccChHHHHHHHhhcCCCCceeccc--chhhcCCchhH
Q psy553            3 KSAMQMQMQRAGSVGGASSLSGGLEANKPHQCQQ-----CLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHV   75 (129)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~-----C~~~f~~~~~l~~h~~~h~~~~~~~C~~--c~~~f~~~~~l   75 (129)
                      ...|..|....+.          ..++++|.|..     |++.|.....|..|++.|.+.++|.|.+  |++.|.....|
T Consensus        16 ~~~L~~H~~~~h~----------h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   85 (155)
T 2gli_A           16 QEQLVHHINSEHI----------HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENL   85 (155)
T ss_dssp             HHHHHHHHHHHTS----------SSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHH
T ss_pred             HHHHHHHHHhhcc----------CCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHH
Confidence            4566677665432          12357788775     3488999999999999999999999985  99999999999


Q ss_pred             HHhhhhhcCCCccchhh--hhhhhhccc-cCcC-----CCCCCeeEe-------eccccccchhhCC
Q psy553           76 QQHTRLHTVEGVNSCLQ--ILSLWIQLD-LKDE-----PRNRNYVVR-------FSWWDDLRPLLGA  127 (129)
Q Consensus        76 ~~H~~~h~~~~~y~C~~--C~~~f~~~~-l~~h-----~~~~~~~~~-------~~~~~~l~~~~~~  127 (129)
                      ..|+++|.++++|.|.+  |++.|.+.. |..|     .++++|.|.       |...++|..|+..
T Consensus        86 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  152 (155)
T 2gli_A           86 KTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKT  152 (155)
T ss_dssp             HHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHh
Confidence            99999999999999998  999999985 6555     457778874       5677788888764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.67  E-value=7.8e-18  Score=106.79  Aligned_cols=101  Identities=23%  Similarity=0.367  Sum_probs=82.7

Q ss_pred             CCCCcccccchhhccChHHHHHHHhh-cCCCCc--------eecccchhhcCCchhHHHhhhhhcCCCccchhh--hhhh
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQHIRV-HTGEKP--------YKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ--ILSL   96 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~--------~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~--C~~~   96 (129)
                      ...+|.|..|++.|.....|..|++. |.+..+        |.|..|++.|.....|..|+++|.++++|.|.+  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            45678899999999999999999987 776654        789999999999999999999999999999988  9999


Q ss_pred             hhccc-cCc----CCCCCCeeEe-------eccccccchhhCCC
Q psy553           97 WIQLD-LKD----EPRNRNYVVR-------FSWWDDLRPLLGAS  128 (129)
Q Consensus        97 f~~~~-l~~----h~~~~~~~~~-------~~~~~~l~~~~~~~  128 (129)
                      |.+.. |..    |.++++|.|.       |...++|..|+.++
T Consensus       102 f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H  145 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH  145 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTT
T ss_pred             cCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHh
Confidence            98874 544    4667777764       56777888888754

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.67  E-value=6e-18  Score=97.84  Aligned_cols=79  Identities=30%  Similarity=0.583  Sum_probs=73.7

Q ss_pred             CCCccccc--chhhccChHHHHHHHhhcCCCCceecc--cchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cC
Q psy553           29 NKPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCT--YCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LK  103 (129)
Q Consensus        29 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~C~--~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~  103 (129)
                      ..+|.|..  |++.|.....|..|++.|.+.++|.|.  .|++.|.....|..|++.|+++++|.|.+|++.|...+ |.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999999999999999997  59999999999999999999999999999999999986 88


Q ss_pred             cCCC
Q psy553          104 DEPR  107 (129)
Q Consensus       104 ~h~~  107 (129)
                      .|++
T Consensus        83 ~H~~   86 (89)
T 2wbs_A           83 LHMK   86 (89)
T ss_dssp             HHGG
T ss_pred             HHHH
Confidence            8764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1.1e-18  Score=105.61  Aligned_cols=83  Identities=12%  Similarity=0.214  Sum_probs=73.8

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhh--cCCCCcee-cccchhhc--CCchhHHHhhhhhcCCCccchhhhhhhhhccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRV--HTGEKPYK-CTYCERRF--KQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD  101 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~--h~~~~~~~-C~~c~~~f--~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~  101 (129)
                      .++++|.|..|++.|.....|..|++.  +.+.+++. |.+|++.|  .....|..|+++|++++||.|.+|++.|.+.+
T Consensus        15 ~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~   94 (115)
T 2dmi_A           15 TGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQ   94 (115)
T ss_dssp             CCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSSHH
T ss_pred             CCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCCHH
Confidence            457899999999999999999999998  76666654 99999988  88999999999999999999999999999996


Q ss_pred             -cCcCCCCC
Q psy553          102 -LKDEPRNR  109 (129)
Q Consensus       102 -l~~h~~~~  109 (129)
                       |..|++..
T Consensus        95 ~L~~H~~~h  103 (115)
T 2dmi_A           95 DLSVHMIKT  103 (115)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHh
Confidence             88885433

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.67  E-value=7.5e-18  Score=110.20  Aligned_cols=100  Identities=28%  Similarity=0.439  Sum_probs=61.8

Q ss_pred             CCCCccc--ccchhhccChHHHHHHHhhcCCCCceec--ccchhhcCCchhHHHhhhhhcCCCccchh--hhhhhhhccc
Q psy553           28 ANKPHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKC--TYCERRFKQLSHVQQHTRLHTVEGVNSCL--QILSLWIQLD  101 (129)
Q Consensus        28 ~~~~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~C--~~c~~~f~~~~~l~~H~~~h~~~~~y~C~--~C~~~f~~~~  101 (129)
                      +.++|.|  ..|++.|.....|..|++.|.+.++|.|  ..|++.|.....|..|+++|.++++|.|.  .|++.|....
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~   88 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKA   88 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHH
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHH
Confidence            3456666  4566666666666666666666666666  56666666666666666666666666666  6666666663


Q ss_pred             -cCcCC------CCCCeeE-------eeccccccchhhCC
Q psy553          102 -LKDEP------RNRNYVV-------RFSWWDDLRPLLGA  127 (129)
Q Consensus       102 -l~~h~------~~~~~~~-------~~~~~~~l~~~~~~  127 (129)
                       |..|+      ++++|.|       .|...++|..|+.+
T Consensus        89 ~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~  128 (190)
T 1tf6_A           89 NMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFS  128 (190)
T ss_dssp             HHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGG
T ss_pred             HHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHH
Confidence             54443      2334544       45555566666543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.67  E-value=1e-16  Score=89.89  Aligned_cols=67  Identities=37%  Similarity=0.721  Sum_probs=60.7

Q ss_pred             CCCCCCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCcc
Q psy553           22 LSGGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVN   88 (129)
Q Consensus        22 ~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y   88 (129)
                      ......++++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|+++|++++||
T Consensus         8 ~~~~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A            8 HSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             ---CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cccccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            3344556789999999999999999999999999999999999999999999999999999999987

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.65  E-value=1e-16  Score=101.63  Aligned_cols=101  Identities=27%  Similarity=0.396  Sum_probs=81.8

Q ss_pred             hHHHHHHHhhhccccCCCCCCCCCCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc--chhhcCCchhHHHhhh
Q psy553            3 KSAMQMQMQRAGSVGGASSLSGGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTR   80 (129)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~--c~~~f~~~~~l~~H~~   80 (129)
                      ...|..|....+......    .......|.|..|++.|.....|..|++.|.+.++|.|.+  |++.|.....|..|++
T Consensus        38 ~~~L~~H~~~~H~~~~~~----~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  113 (155)
T 2rpc_A           38 MHELVTHVTMEHVGGPEQ----NNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKR  113 (155)
T ss_dssp             HHHHHHHHHTTTSCCTTC----SSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHT
T ss_pred             HHHHHHHHHhhcCCCccc----CCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHH
Confidence            456777766544421110    0111234899999999999999999999999999999998  9999999999999999


Q ss_pred             hhcCCCccchhh--hhhhhhccc-cCcCCC
Q psy553           81 LHTVEGVNSCLQ--ILSLWIQLD-LKDEPR  107 (129)
Q Consensus        81 ~h~~~~~y~C~~--C~~~f~~~~-l~~h~~  107 (129)
                      +|+++++|.|.+  |++.|.+.. |..|++
T Consensus       114 ~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A          114 THTGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             TTCSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             hhCCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            999999999997  999999985 777754

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.64  E-value=6.3e-17  Score=105.79  Aligned_cols=78  Identities=23%  Similarity=0.406  Sum_probs=46.9

Q ss_pred             CCCcccc--cchhhccChHHHHHHH-hhc-CCCCceec--ccchhhcCCchhHHHhhhhhcCCCccchhh--hhhhhhcc
Q psy553           29 NKPHQCQ--QCLKSFSSNHQLVQHI-RVH-TGEKPYKC--TYCERRFKQLSHVQQHTRLHTVEGVNSCLQ--ILSLWIQL  100 (129)
Q Consensus        29 ~~~~~C~--~C~~~f~~~~~l~~h~-~~h-~~~~~~~C--~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~--C~~~f~~~  100 (129)
                      +++|.|.  .|++.|.....|..|+ ..| .+.++|.|  ..|++.|.....|..|+++|++++||.|.+  |++.|.+.
T Consensus        70 ~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~  149 (190)
T 1tf6_A           70 EKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLP  149 (190)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSH
T ss_pred             CCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCH
Confidence            3556666  5666666666666665 444 34455666  556666666666666666666666666655  66666665


Q ss_pred             c-cCcCC
Q psy553          101 D-LKDEP  106 (129)
Q Consensus       101 ~-l~~h~  106 (129)
                      . |..|+
T Consensus       150 ~~L~~H~  156 (190)
T 1tf6_A          150 SRLKRHE  156 (190)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            3 55554

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.5e-16  Score=94.72  Aligned_cols=69  Identities=16%  Similarity=0.271  Sum_probs=63.2

Q ss_pred             CCCCCCCcccccchhhccChHHHHHHHh-hc---CCCCceecccchhhcCCchhHHHh-hhhhcCCCccchhhh
Q psy553           25 GLEANKPHQCQQCLKSFSSNHQLVQHIR-VH---TGEKPYKCTYCERRFKQLSHVQQH-TRLHTVEGVNSCLQI   93 (129)
Q Consensus        25 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h---~~~~~~~C~~c~~~f~~~~~l~~H-~~~h~~~~~y~C~~C   93 (129)
                      ...+++||.|..|++.|.....|..|++ .|   .+++||.|.+|++.|.....|..| +++|++++||.|.++
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            3566899999999999999999999997 58   568999999999999999999999 899999999999873

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.63  E-value=1.5e-16  Score=99.13  Aligned_cols=72  Identities=25%  Similarity=0.414  Sum_probs=66.8

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCC------ccchhhhhhhhhcc
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG------VNSCLQILSLWIQL  100 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~------~y~C~~C~~~f~~~  100 (129)
                      +++|.|..|++.|.....|..|+++|.+++||.|.+|++.|.....|..|++++++++      +|.|.+|++.|.+.
T Consensus        48 ~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           48 EKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             CSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            6899999999999999999999999999999999999999999999999999998764      58899999888765

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.63  E-value=8.5e-17  Score=98.37  Aligned_cols=78  Identities=35%  Similarity=0.642  Sum_probs=73.1

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceeccc--chhhcCCchhHHHhhhhhcCCCccchh--hhhhhhhccc-cC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVEGVNSCL--QILSLWIQLD-LK  103 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~--c~~~f~~~~~l~~H~~~h~~~~~y~C~--~C~~~f~~~~-l~  103 (129)
                      +++|.|..|++.|.....|..|++.|.+.++|.|.+  |++.|.....|..|+++|.++++|.|.  .|++.|...+ |.
T Consensus        32 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~  111 (124)
T 1ubd_C           32 PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLK  111 (124)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTH
T ss_pred             CCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHH
Confidence            478999999999999999999999999999999986  999999999999999999999999995  5999999996 88


Q ss_pred             cCC
Q psy553          104 DEP  106 (129)
Q Consensus       104 ~h~  106 (129)
                      .|+
T Consensus       112 ~H~  114 (124)
T 1ubd_C          112 SHI  114 (124)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            774

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.62  E-value=2e-17  Score=89.48  Aligned_cols=52  Identities=19%  Similarity=0.475  Sum_probs=48.6

Q ss_pred             CCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCCC
Q psy553           56 GEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEPR  107 (129)
Q Consensus        56 ~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~~  107 (129)
                      +++||.|.+|++.|.....|..|+++|++++||.|.+|++.|.+.+ |..|++
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~   53 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLK   53 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGG
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhC
Confidence            3689999999999999999999999999999999999999999996 888854

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.61  E-value=7.3e-17  Score=102.11  Aligned_cols=79  Identities=35%  Similarity=0.665  Sum_probs=73.9

Q ss_pred             CCCccccc--chhhccChHHHHHHHhhcCCCCceeccc--chhhcCCchhHHHhh-hhhcCCCccchhh--hhhhhhccc
Q psy553           29 NKPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHT-RLHTVEGVNSCLQ--ILSLWIQLD  101 (129)
Q Consensus        29 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~C~~--c~~~f~~~~~l~~H~-~~h~~~~~y~C~~--C~~~f~~~~  101 (129)
                      +++|.|..  |++.|.....|..|++.|.+.++|.|.+  |++.|.....|..|+ +.|+++++|.|.+  |++.|.+..
T Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~  144 (155)
T 2gli_A           65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS  144 (155)
T ss_dssp             CCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHH
T ss_pred             CCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHH
Confidence            57899985  9999999999999999999999999998  999999999999998 8999999999998  999999996


Q ss_pred             -cCcCCC
Q psy553          102 -LKDEPR  107 (129)
Q Consensus       102 -l~~h~~  107 (129)
                       |..|++
T Consensus       145 ~L~~H~~  151 (155)
T 2gli_A          145 SLRKHVK  151 (155)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence             888753

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.5e-15  Score=86.11  Aligned_cols=72  Identities=17%  Similarity=0.283  Sum_probs=65.4

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCC----CceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhh
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGE----KPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLW   97 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~----~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f   97 (129)
                      ..++++|.|..|++.|.....|..|++.+...    ++|.|.+|++.|.....|..|+++|++++++.|..|+..|
T Consensus        10 H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             ecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            34578999999999999999999999876654    7899999999999999999999999999999999998754

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=4.4e-15  Score=82.22  Aligned_cols=64  Identities=30%  Similarity=0.564  Sum_probs=59.7

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS   89 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~   89 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|.+|++.|.....|..|+++|++++|..
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            3457899999999999999999999999999999999999999999999999999999998864

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.56  E-value=1.3e-16  Score=91.25  Aligned_cols=74  Identities=26%  Similarity=0.481  Sum_probs=68.9

Q ss_pred             Cccc--ccchhhccChHHHHHHHhhcCCCCceeccc--chhhcCCchhHHHhhhhhcCCCccchhh---hhhhhhccc-c
Q psy553           31 PHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVEGVNSCLQ---ILSLWIQLD-L  102 (129)
Q Consensus        31 ~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~--c~~~f~~~~~l~~H~~~h~~~~~y~C~~---C~~~f~~~~-l  102 (129)
                      ||.|  ..|++.|.....|..|+++|.++++|.|..  |++.|.....|..|+++|++   |.|.+   |++.|.... |
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5889  889999999999999999999999999988  99999999999999999998   99999   999999985 8


Q ss_pred             CcCCC
Q psy553          103 KDEPR  107 (129)
Q Consensus       103 ~~h~~  107 (129)
                      ..|++
T Consensus        78 ~~H~~   82 (85)
T 2j7j_A           78 LKHVA   82 (85)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            77753

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.2e-14  Score=80.90  Aligned_cols=64  Identities=50%  Similarity=0.794  Sum_probs=58.3

Q ss_pred             CCCCCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCC
Q psy553           23 SGGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        23 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      +....++++|.|..|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            3345667999999999999999999999999999999999999999999999999999998764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.53  E-value=1.6e-14  Score=83.20  Aligned_cols=60  Identities=25%  Similarity=0.553  Sum_probs=54.5

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhh-hhhcCCC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHT-RLHTVEG   86 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~-~~h~~~~   86 (129)
                      ...++|.|.+|++.|.....|..|+++|.+++||.|.+|++.|.....|..|+ +.|++|.
T Consensus        24 ~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           24 ASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            34678999999999999999999999999999999999999999999999996 5787764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.46  E-value=1.2e-13  Score=82.12  Aligned_cols=62  Identities=31%  Similarity=0.640  Sum_probs=59.5

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccch
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC   90 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C   90 (129)
                      +++|.|..|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.+++||.+
T Consensus        43 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           43 ERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             SCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            57899999999999999999999999999999999999999999999999999999999864

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.46  E-value=4e-14  Score=75.06  Aligned_cols=56  Identities=41%  Similarity=0.720  Sum_probs=48.0

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +++|.|..|++.|.....|..|+++|.+++||.|.+|++.|.....|..|+++|.+
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            57899999999999999999999999999999999999999999999999988753

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.46  E-value=6.8e-14  Score=74.16  Aligned_cols=56  Identities=30%  Similarity=0.628  Sum_probs=52.5

Q ss_pred             CcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCC
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      ||.|..|++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|.+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68899999999999999999999999999999999999999999999999998875

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.43  E-value=1.1e-13  Score=80.73  Aligned_cols=61  Identities=28%  Similarity=0.483  Sum_probs=57.3

Q ss_pred             CcccccchhhccChHHHHHHHhh-cCCCCc--------eecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRV-HTGEKP--------YKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~-h~~~~~--------~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .+.|..|++.|.....|..|++. |.+.++        |.|..|++.|.....|..|+++|++++||.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            36799999999999999999998 988877        89999999999999999999999999999996

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.3e-13  Score=81.12  Aligned_cols=64  Identities=13%  Similarity=0.155  Sum_probs=46.8

Q ss_pred             ccChHHHHHHHhhcCCCCceecccchhhc-CCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC
Q psy553           41 FSSNHQLVQHIRVHTGEKPYKCTYCERRF-KQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        41 f~~~~~l~~h~~~h~~~~~~~C~~c~~~f-~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                      |.....+..|++.+.+.++|.|..|++.| .....|..|+++| +++||.|.+|++.|.+.. |..|
T Consensus        16 ~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H   81 (96)
T 2ctd_A           16 YAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYH   81 (96)
T ss_dssp             SCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHH
T ss_pred             CCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHH
Confidence            34455566777777777777777777777 7777777777777 777777777777777774 6666

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.42  E-value=5.8e-15  Score=85.07  Aligned_cols=55  Identities=16%  Similarity=0.243  Sum_probs=50.4

Q ss_pred             hhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        52 ~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      ..+...+++.|.+|++.|.....|..|+++|++++||.|.+|++.|.+++ |.+|+
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence            34566788999999999999999999999999999999999999999996 88885

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=4.2e-14  Score=83.33  Aligned_cols=62  Identities=19%  Similarity=0.342  Sum_probs=45.3

Q ss_pred             CCCCcccccchhhcc-ChHHHHHHHhhcCC-CCceecccchhhcCCchhHHHhhhhhcCCCccc
Q psy553           28 ANKPHQCQQCLKSFS-SNHQLVQHIRVHTG-EKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS   89 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~-~~~~l~~h~~~h~~-~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~   89 (129)
                      ++++|.|..|++.|. ....|..|+++|.+ .++|.|.+|++.|.....|..|+++|++++|+.
T Consensus        21 ~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A           21 ERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             TTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             cCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            356777777777777 77777777777776 677777777777777777777777777777654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=1.4e-14  Score=85.28  Aligned_cols=61  Identities=15%  Similarity=0.338  Sum_probs=56.0

Q ss_pred             CCCcccccchhhc-cChHHHHHHHhhcCCCCceecccchhhcCCchhHHHh-hhhhcCCCccch
Q psy553           29 NKPHQCQQCLKSF-SSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQH-TRLHTVEGVNSC   90 (129)
Q Consensus        29 ~~~~~C~~C~~~f-~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H-~~~h~~~~~y~C   90 (129)
                      +++|.|..|++.| .....|..|+++| ++++|.|.+|++.|.....|..| +++|+++..+.+
T Consensus        32 ~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           32 KGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             TSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             CCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            5789999999999 9999999999999 99999999999999999999999 999987655543

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=6.7e-15  Score=88.84  Aligned_cols=82  Identities=15%  Similarity=0.189  Sum_probs=69.2

Q ss_pred             HHHHHHhhcCCCCceecccchhhcCCchhHHHhhhh--hcCCCccc-hhhhhhhh--hccc-cCcC----CCCCCeeE--
Q psy553           46 QLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRL--HTVEGVNS-CLQILSLW--IQLD-LKDE----PRNRNYVV--  113 (129)
Q Consensus        46 ~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~--h~~~~~y~-C~~C~~~f--~~~~-l~~h----~~~~~~~~--  113 (129)
                      .|..|+++|.++++|.|.+|++.|.....|..|+++  |.+++++. |.+|++.|  .... |..|    .++++|.|  
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~   85 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY   85 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSS
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCC
Confidence            466789999999999999999999999999999998  77777765 99999999  6664 7666    45778885  


Q ss_pred             ---eeccccccchhhCC
Q psy553          114 ---RFSWWDDLRPLLGA  127 (129)
Q Consensus       114 ---~~~~~~~l~~~~~~  127 (129)
                         .|...++|..|+..
T Consensus        86 C~k~f~~~~~L~~H~~~  102 (115)
T 2dmi_A           86 CGHSFESLQDLSVHMIK  102 (115)
T ss_dssp             SCCBCSSHHHHHHHHHH
T ss_pred             CCCccCCHHHHHHHHHH
Confidence               78888899999864

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.40  E-value=3.6e-13  Score=77.58  Aligned_cols=59  Identities=41%  Similarity=0.896  Sum_probs=54.3

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCc
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV   87 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~   87 (129)
                      +++|.|..|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|+++|+++++
T Consensus        32 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           32 QKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGGGC---
T ss_pred             CCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHhcccCC
Confidence            57899999999999999999999999999999999999999999999999999998763

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=2.2e-13  Score=76.71  Aligned_cols=64  Identities=22%  Similarity=0.421  Sum_probs=55.4

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCC---CCceecccchhhcCCchhHHHhh-hhhcCCCccch
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTG---EKPYKCTYCERRFKQLSHVQQHT-RLHTVEGVNSC   90 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~---~~~~~C~~c~~~f~~~~~l~~H~-~~h~~~~~y~C   90 (129)
                      .++++|.|..|++.|.....|..|++.|.+   +++|.|.+|++.|.....|..|+ ..|.++++...
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            3 SGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            457899999999999999999999999885   78999999999999999999998 56777776543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=3.6e-13  Score=72.09  Aligned_cols=56  Identities=32%  Similarity=0.781  Sum_probs=48.9

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhh-hhhcCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHT-RLHTVE   85 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~-~~h~~~   85 (129)
                      +||.|..|++.|.....|..|++.|.+.++|.|..|++.|.....|..|+ +.|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47889999999999999999999999989999999999999999999996 677664

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=3.8e-15  Score=87.86  Aligned_cols=61  Identities=13%  Similarity=0.156  Sum_probs=55.9

Q ss_pred             HHHHHHhhcCCCCceecccchhhcC-CchhHHHhhhhhcC-CCccchhhhhhhhhccc-cCcCC
Q psy553           46 QLVQHIRVHTGEKPYKCTYCERRFK-QLSHVQQHTRLHTV-EGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        46 ~l~~h~~~h~~~~~~~C~~c~~~f~-~~~~l~~H~~~h~~-~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      .+..|+++|.+.++|.|.+|++.|. ....|..|+++|++ +++|.|.+|++.|.+.. |.+|+
T Consensus        11 ~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~   74 (98)
T 2gqj_A           11 PEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHT   74 (98)
T ss_dssp             SCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHH
T ss_pred             cHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHH
Confidence            3457899999999999999999999 99999999999999 99999999999999995 87774

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=2.2e-14  Score=79.86  Aligned_cols=56  Identities=36%  Similarity=0.599  Sum_probs=52.0

Q ss_pred             HhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           51 IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        51 ~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      .++|.++++|.|.+|++.|.....|..|+++|.+++||.|.+|++.|.+.. |..|+
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   62 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ   62 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHH
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHH
Confidence            457889999999999999999999999999999999999999999999986 88774

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.38  E-value=4.6e-15  Score=83.64  Aligned_cols=58  Identities=24%  Similarity=0.496  Sum_probs=44.2

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHh-hcCCC-CceecccchhhcCCchhHHHhhhhhc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIR-VHTGE-KPYKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~-~~~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      ..++++|.|..|++.|.....|..|+. .|.+. ++|.|.+|++.|.....|..|++.+.
T Consensus        10 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H   69 (77)
T 2ct1_A           10 HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQH   69 (77)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             cCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhC
Confidence            445677888888888888888888876 56654 67888888888888888888877643

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.37  E-value=1e-12  Score=76.55  Aligned_cols=61  Identities=31%  Similarity=0.615  Sum_probs=57.6

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccc
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS   89 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~   89 (129)
                      +++|.|..|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+++++..
T Consensus        34 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~p~   94 (96)
T 2dmd_A           34 VKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPS   94 (96)
T ss_dssp             CCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCSCCCCC
T ss_pred             CCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcCCCCCC
Confidence            5789999999999999999999999999999999999999999999999999999987654

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.37  E-value=5.7e-15  Score=90.90  Aligned_cols=76  Identities=16%  Similarity=0.190  Sum_probs=64.2

Q ss_pred             CCCcccccchhhcc------ChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-
Q psy553           29 NKPHQCQQCLKSFS------SNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-  101 (129)
Q Consensus        29 ~~~~~C~~C~~~f~------~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-  101 (129)
                      ++.+.|..|...|.      ....|..|+ .|.+++||.|.+|++.|.....|..|+++|  ++||.|.+|++.|.+.+ 
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHH
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHH
Confidence            35577888877665      556666666 688889999999999999999999999998  89999999999999996 


Q ss_pred             cCcCCC
Q psy553          102 LKDEPR  107 (129)
Q Consensus       102 l~~h~~  107 (129)
                      |.+|++
T Consensus       116 l~~H~~  121 (129)
T 2wbt_A          116 ALDHVC  121 (129)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            888754

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.1e-13  Score=82.89  Aligned_cols=74  Identities=22%  Similarity=0.382  Sum_probs=64.6

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC----CCCCCeeE-----eeccccccc
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE----PRNRNYVV-----RFSWWDDLR  122 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h----~~~~~~~~-----~~~~~~~l~  122 (129)
                      .|.++++|.| .|++.|.....|..|++.|.++++|.|.+|++.|.... |..|    .++++|.|     .|...++|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            5788899999 89999999999999999999999999999999999984 5554    56778886     688888999


Q ss_pred             hhhCC
Q psy553          123 PLLGA  127 (129)
Q Consensus       123 ~~~~~  127 (129)
                      .||..
T Consensus        83 ~H~~~   87 (110)
T 2csh_A           83 RHVTS   87 (110)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            98853

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=7.8e-14  Score=78.50  Aligned_cols=60  Identities=25%  Similarity=0.383  Sum_probs=51.5

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC----CCCCCee
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE----PRNRNYV  112 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h----~~~~~~~  112 (129)
                      .+.++++|.|.+|++.|.....|..|+++|.+++||.|.+|++.|...+ |..|    .++++|.
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            3456789999999999999999999999999999999999999999985 6665    4455554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.35  E-value=1.7e-13  Score=69.55  Aligned_cols=45  Identities=29%  Similarity=0.363  Sum_probs=41.3

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.6e-13  Score=69.66  Aligned_cols=45  Identities=27%  Similarity=0.479  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999877

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.35  E-value=5.4e-13  Score=72.73  Aligned_cols=57  Identities=18%  Similarity=0.539  Sum_probs=44.8

Q ss_pred             CCCCcccccchhhccChHHHHHHHhh-c-CCCCceecccchhhcCCchhHHHhhhhhcC
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQHIRV-H-TGEKPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h~~~-h-~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      ++++|.|..|++.|.....|..|++. | .+.++|.|..|++.|.....|..|++.+++
T Consensus         7 ~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            7 GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             ETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             CCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            45778888888888888888888876 6 477788888888888888888888877654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.34  E-value=1.4e-13  Score=76.90  Aligned_cols=54  Identities=26%  Similarity=0.478  Sum_probs=49.5

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      .+.+.++|.|..|++.|.....|..|+++|.++++|.|.+|++.|.+.. |.+|+
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~   65 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT   65 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHH
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHH
Confidence            4667889999999999999999999999999999999999999999985 77764

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.34  E-value=1.7e-13  Score=69.59  Aligned_cols=45  Identities=27%  Similarity=0.354  Sum_probs=40.8

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            467888999999999999999999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.34  E-value=2.1e-13  Score=69.30  Aligned_cols=44  Identities=34%  Similarity=0.490  Sum_probs=40.4

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67788999999999999999999999999999999999999877

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.7e-13  Score=69.58  Aligned_cols=45  Identities=36%  Similarity=0.513  Sum_probs=40.3

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2.6e-13  Score=68.89  Aligned_cols=44  Identities=32%  Similarity=0.398  Sum_probs=40.3

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788899999999999999999999999999999999999887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.7e-13  Score=69.53  Aligned_cols=45  Identities=36%  Similarity=0.488  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999887

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.7e-13  Score=69.57  Aligned_cols=45  Identities=38%  Similarity=0.527  Sum_probs=40.6

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788899999999999999999999999999999999999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.1e-13  Score=69.28  Aligned_cols=45  Identities=27%  Similarity=0.389  Sum_probs=40.7

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367888999999999999999999999999999999999999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.34  E-value=2e-13  Score=69.35  Aligned_cols=45  Identities=33%  Similarity=0.464  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999876

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.34  E-value=1.5e-12  Score=73.66  Aligned_cols=56  Identities=41%  Similarity=0.758  Sum_probs=53.0

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +++|.|..|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|+|
T Consensus        27 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           27 TRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             CCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            57899999999999999999999999999999999999999999999999999875

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.8e-13  Score=69.49  Aligned_cols=45  Identities=29%  Similarity=0.421  Sum_probs=40.2

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            467788889999999999999999999999999999999999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.1e-13  Score=69.29  Aligned_cols=45  Identities=36%  Similarity=0.524  Sum_probs=40.8

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            367888999999999999999999999999999999999999877

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.7e-13  Score=69.59  Aligned_cols=45  Identities=27%  Similarity=0.411  Sum_probs=40.7

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            467888999999999999999999999999999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.7e-13  Score=68.90  Aligned_cols=44  Identities=25%  Similarity=0.397  Sum_probs=39.6

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67788889999999999999999999999999999999999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.33  E-value=3.1e-13  Score=68.57  Aligned_cols=45  Identities=31%  Similarity=0.480  Sum_probs=41.2

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999887

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=4.5e-13  Score=79.63  Aligned_cols=65  Identities=22%  Similarity=0.389  Sum_probs=55.9

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhh-hh---cCCCccchhhhhhhhhccc-cCcC-----CCCCCeeEeecc
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTR-LH---TVEGVNSCLQILSLWIQLD-LKDE-----PRNRNYVVRFSW  117 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~-~h---~~~~~y~C~~C~~~f~~~~-l~~h-----~~~~~~~~~~~~  117 (129)
                      ...+++||.|..|++.|.....|..|++ .|   .+++||.|.+|++.|..+. |..|     .++++|.|....
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            4568899999999999999999999997 58   6789999999999999985 6555     578899987743

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2.1e-13  Score=68.58  Aligned_cols=44  Identities=27%  Similarity=0.430  Sum_probs=38.9

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56678888999999999999999999999999999999999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.33  E-value=1.9e-13  Score=69.45  Aligned_cols=45  Identities=38%  Similarity=0.563  Sum_probs=40.2

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788889999999999999999999999999999999999876

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=6.5e-14  Score=80.10  Aligned_cols=70  Identities=21%  Similarity=0.322  Sum_probs=58.6

Q ss_pred             HHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCC----Cccchhhhhhhhhccc-cCcC----CCCCCeeEeec
Q psy553           47 LVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE----GVNSCLQILSLWIQLD-LKDE----PRNRNYVVRFS  116 (129)
Q Consensus        47 l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~----~~y~C~~C~~~f~~~~-l~~h----~~~~~~~~~~~  116 (129)
                      +..|+++|.++++|.|.+|++.|.....|..|++.+.++    ++|.|.+|++.|...+ |..|    .+++.+.+..+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            456899999999999999999999999999999887765    7999999999999985 7665    55666655443

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.8e-13  Score=69.46  Aligned_cols=45  Identities=38%  Similarity=0.533  Sum_probs=41.6

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999877

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.1e-13  Score=69.22  Aligned_cols=45  Identities=31%  Similarity=0.521  Sum_probs=40.9

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.1e-13  Score=69.29  Aligned_cols=45  Identities=36%  Similarity=0.532  Sum_probs=41.2

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467888999999999999999999999999999999999999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.9e-13  Score=69.44  Aligned_cols=45  Identities=29%  Similarity=0.396  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.4e-13  Score=69.00  Aligned_cols=45  Identities=29%  Similarity=0.453  Sum_probs=40.9

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=1.9e-13  Score=69.44  Aligned_cols=45  Identities=31%  Similarity=0.498  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.2e-13  Score=69.15  Aligned_cols=45  Identities=33%  Similarity=0.461  Sum_probs=40.3

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467788889999999999999999999999999999999999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2e-13  Score=69.33  Aligned_cols=45  Identities=38%  Similarity=0.536  Sum_probs=40.5

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            467788899999999999999999999999999999999999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.5e-13  Score=68.94  Aligned_cols=44  Identities=32%  Similarity=0.469  Sum_probs=39.4

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788888999999999999999999999999999999999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.8e-13  Score=68.76  Aligned_cols=45  Identities=36%  Similarity=0.549  Sum_probs=41.4

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999877

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.8e-13  Score=68.71  Aligned_cols=45  Identities=31%  Similarity=0.521  Sum_probs=41.1

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999877

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=3.8e-12  Score=71.45  Aligned_cols=60  Identities=30%  Similarity=0.457  Sum_probs=53.8

Q ss_pred             HHHHhhcCCCCceecccchhhcCCchhHHHhhh-hhcCC-Cccchhhhhhhhhccc-cCcCCC
Q psy553           48 VQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTR-LHTVE-GVNSCLQILSLWIQLD-LKDEPR  107 (129)
Q Consensus        48 ~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~-~h~~~-~~y~C~~C~~~f~~~~-l~~h~~  107 (129)
                      ..|+++|.+++||.|.+|++.|.....|..|++ .|.++ ++|.|.+|++.|.+.+ |..|++
T Consensus         4 ~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~   66 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR   66 (77)
T ss_dssp             CCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHH
T ss_pred             CccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHH
Confidence            468899999999999999999999999999997 67764 8999999999999986 888754

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.2e-13  Score=76.39  Aligned_cols=54  Identities=19%  Similarity=0.230  Sum_probs=50.0

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      .+.++++|.|.+|++.|.....|..|+++|.++++|.|.+|++.|.+.+ |..|+
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~   57 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHM   57 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHH
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHH
Confidence            4678899999999999999999999999999999999999999999986 87774

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.1e-13  Score=69.25  Aligned_cols=45  Identities=36%  Similarity=0.527  Sum_probs=40.4

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=2e-13  Score=69.39  Aligned_cols=45  Identities=29%  Similarity=0.361  Sum_probs=40.8

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467888899999999999999999999999999999999999877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.1e-13  Score=69.23  Aligned_cols=45  Identities=31%  Similarity=0.395  Sum_probs=40.5

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788899999999999999999999999999999999999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2e-13  Score=69.30  Aligned_cols=45  Identities=31%  Similarity=0.484  Sum_probs=40.0

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999876

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=5.9e-14  Score=76.62  Aligned_cols=56  Identities=21%  Similarity=0.415  Sum_probs=50.2

Q ss_pred             HhhcCCCCceecccchhhcCCchhHHHhhhh-h-cCCCccchhhhhhhhhccc-cCcCC
Q psy553           51 IRVHTGEKPYKCTYCERRFKQLSHVQQHTRL-H-TVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        51 ~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~-h-~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      +++|.++++|.|..|++.|.....|..|++. | .+++||.|.+|++.|.+.+ |..|+
T Consensus         2 ~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~   60 (66)
T 2drp_A            2 EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV   60 (66)
T ss_dssp             -CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHH
T ss_pred             ccccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHH
Confidence            3568889999999999999999999999998 7 6899999999999999986 87774

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.5e-13  Score=68.91  Aligned_cols=45  Identities=31%  Similarity=0.363  Sum_probs=41.0

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467788999999999999999999999999999999999999877

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.32  E-value=7.3e-14  Score=74.04  Aligned_cols=51  Identities=25%  Similarity=0.335  Sum_probs=44.6

Q ss_pred             CCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           56 GEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        56 ~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      ++++|.|.+|++.|.....|..|+++|++++||.|.+|++.|...+ |..|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   52 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHL   52 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHH
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHH
Confidence            3578999999999999999999999999999999999999999986 87775

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.9e-13  Score=68.78  Aligned_cols=44  Identities=30%  Similarity=0.401  Sum_probs=39.1

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67788888999999999999999999999999999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.2e-13  Score=69.24  Aligned_cols=45  Identities=27%  Similarity=0.447  Sum_probs=41.3

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3e-13  Score=68.66  Aligned_cols=45  Identities=31%  Similarity=0.543  Sum_probs=40.4

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999876

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=4.3e-14  Score=79.69  Aligned_cols=54  Identities=17%  Similarity=0.212  Sum_probs=49.5

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhhhhcC---CCccchhhhhhhhhccc-cCcCC
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV---EGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~---~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      .|.++++|.|.+|++.|.....|..|+++|.+   +++|.|.+|++.|...+ |..|+
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHH
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHH
Confidence            36788999999999999999999999999986   89999999999999986 87774

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=2.4e-13  Score=68.99  Aligned_cols=45  Identities=24%  Similarity=0.339  Sum_probs=40.8

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467788999999999999999999999999999999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=3.9e-13  Score=68.22  Aligned_cols=44  Identities=20%  Similarity=0.184  Sum_probs=40.1

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788899999999999999999999999999999999999876

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.32  E-value=9e-13  Score=78.51  Aligned_cols=61  Identities=21%  Similarity=0.330  Sum_probs=57.7

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhh-hhcCCCccchh
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTR-LHTVEGVNSCL   91 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~-~h~~~~~y~C~   91 (129)
                      ++|.|..|++.|.....|..|+. |.++++|.|.+|++.|.....|..|++ .|.++++|.|.
T Consensus        41 ~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           41 NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            57999999999999999999996 999999999999999999999999997 99999999874

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.32  E-value=3.8e-13  Score=68.32  Aligned_cols=44  Identities=30%  Similarity=0.455  Sum_probs=39.1

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66788888999999999999999999999999999999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.9e-13  Score=68.67  Aligned_cols=45  Identities=38%  Similarity=0.557  Sum_probs=39.9

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-13  Score=68.66  Aligned_cols=44  Identities=30%  Similarity=0.465  Sum_probs=39.7

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            67788889999999999999999999999999999999999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=3.6e-13  Score=68.35  Aligned_cols=44  Identities=30%  Similarity=0.408  Sum_probs=39.2

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67788888999999999999999999999999999999999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.4e-13  Score=68.48  Aligned_cols=45  Identities=33%  Similarity=0.454  Sum_probs=40.2

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            367788889999999999999999999999999999999999876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.7e-13  Score=68.30  Aligned_cols=45  Identities=31%  Similarity=0.495  Sum_probs=40.9

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999865

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.4e-13  Score=68.55  Aligned_cols=44  Identities=39%  Similarity=0.511  Sum_probs=38.5

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56778888899999999999999999999999999999999876

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=2.8e-12  Score=71.18  Aligned_cols=58  Identities=40%  Similarity=0.889  Sum_probs=44.3

Q ss_pred             CCCCCCcccc--cchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhc
Q psy553           26 LEANKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        26 ~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      ..++++|.|.  .|++.|.....|..|++.|.+.++|.|.+|++.|.....|..|+++|+
T Consensus        14 ~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3446778886  488888888888888888887788888888888888888888877663

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.1e-13  Score=68.17  Aligned_cols=44  Identities=32%  Similarity=0.510  Sum_probs=38.8

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56778888899999999999999999999999999999999876

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=2.1e-13  Score=73.01  Aligned_cols=49  Identities=27%  Similarity=0.489  Sum_probs=46.0

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      +||.|..|++.|.....|..|+++|++++||.|.+|++.|.+.+ |..|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            47999999999999999999999999999999999999999986 88885

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=2.1e-12  Score=70.53  Aligned_cols=59  Identities=15%  Similarity=0.294  Sum_probs=52.4

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecc-cchhhcCCchhHHHhhhhhcCCCc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT-YCERRFKQLSHVQQHTRLHTVEGV   87 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~-~c~~~f~~~~~l~~H~~~h~~~~~   87 (129)
                      -..++|.|..|++.|. ...|..|+++ .+++||.|. .|++.|.....|..|+++|...++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3468899999999999 9999999998 889999999 999999999999999998877655

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.29  E-value=8.1e-13  Score=69.47  Aligned_cols=44  Identities=30%  Similarity=0.524  Sum_probs=22.7

Q ss_pred             CCCCceecccchhhcCCchhHHHhhh-hhcCCCccchhhhhhhhh
Q psy553           55 TGEKPYKCTYCERRFKQLSHVQQHTR-LHTVEGVNSCLQILSLWI   98 (129)
Q Consensus        55 ~~~~~~~C~~c~~~f~~~~~l~~H~~-~h~~~~~y~C~~C~~~f~   98 (129)
                      .++++|.|.+|++.|.....|..|++ +|++++||.|.+|++.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            34445555555555555555555544 455555555555555554

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=6.2e-13  Score=67.68  Aligned_cols=44  Identities=32%  Similarity=0.425  Sum_probs=39.3

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhh-hhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTR-LHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~-~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|++ +|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            6778888899999999999999999999998 9999999999876

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=4.4e-14  Score=78.35  Aligned_cols=52  Identities=19%  Similarity=0.314  Sum_probs=27.5

Q ss_pred             HHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC
Q psy553           47 LVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        47 l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                      |..|++.|.++++|.|..|++.|.....|..       +++|.|.+|++.|.+.+ |..|
T Consensus         6 l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H   58 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKD   58 (73)
T ss_dssp             CCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCC
T ss_pred             HHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHH
Confidence            3345555555555555555555555544433       45555555555555553 4444

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=9.1e-13  Score=66.87  Aligned_cols=44  Identities=34%  Similarity=0.535  Sum_probs=39.2

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67788889999999999999999999999999999999999764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.27  E-value=1.8e-13  Score=72.47  Aligned_cols=50  Identities=24%  Similarity=0.325  Sum_probs=45.9

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCCCC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEPRN  108 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~~~  108 (129)
                      ||.|..|++.|.....|..|+++|.+++||.|.+|++.|...+ |..|++.
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   51 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS   51 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHH
Confidence            6899999999999999999999999999999999999999986 8877543

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.26  E-value=1.7e-13  Score=74.24  Aligned_cols=55  Identities=18%  Similarity=0.269  Sum_probs=47.4

Q ss_pred             HHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC
Q psy553           48 VQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        48 ~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                      ..|+++|.+++||.|..|++.|.....|.   ++|++++||.|.+|++.|...+ +..+
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            35788899999999999999998887775   7899999999999999999986 4433

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.26  E-value=9e-12  Score=68.95  Aligned_cols=59  Identities=37%  Similarity=0.794  Sum_probs=50.6

Q ss_pred             CCCCCCCCccccc--chhhccChHHHHHHHhhcCCCCceeccc--chhhcCCchhHHHhhhhh
Q psy553           24 GGLEANKPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        24 ~~~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~C~~--c~~~f~~~~~l~~H~~~h   82 (129)
                      ......++|.|..  |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3345568899988  9999999999999999999999999965  999999999999998765

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.24  E-value=3.9e-14  Score=81.69  Aligned_cols=70  Identities=24%  Similarity=0.312  Sum_probs=58.7

Q ss_pred             CCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCCCCC---CeeE-----eeccccccchhhC
Q psy553           57 EKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEPRNR---NYVV-----RFSWWDDLRPLLG  126 (129)
Q Consensus        57 ~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~~~~---~~~~-----~~~~~~~l~~~~~  126 (129)
                      ++||.|..|++.|.....|..|+++|.+++||.|.+|++.|...+ |..|++..   ++.|     .|...++|..|+.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHH
Confidence            478999999999999999999999999999999999999999996 88885432   2332     6777777877764

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=7.2e-13  Score=73.63  Aligned_cols=56  Identities=29%  Similarity=0.541  Sum_probs=50.8

Q ss_pred             hhcCCCCceecc--cchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCCC
Q psy553           52 RVHTGEKPYKCT--YCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEPR  107 (129)
Q Consensus        52 ~~h~~~~~~~C~--~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~~  107 (129)
                      ..+.+.++|.|.  .|++.|.....|..|+++|.++++|.|.+|++.|...+ |..|.+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   70 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR   70 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHT
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHH
Confidence            357788999997  59999999999999999999999999999999999986 888754

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.8e-12  Score=65.72  Aligned_cols=43  Identities=37%  Similarity=0.538  Sum_probs=34.4

Q ss_pred             HhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           51 IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        51 ~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      +++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4567777888888888888888888888888888888888766

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.22  E-value=3e-12  Score=65.56  Aligned_cols=40  Identities=23%  Similarity=0.350  Sum_probs=21.9

Q ss_pred             CCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhh
Q psy553           55 TGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQIL   94 (129)
Q Consensus        55 ~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~   94 (129)
                      .+.++|.|.+|++.|.....|..|+++|++++||.|.+|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            3444555555555555555555555555555555555554

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.22  E-value=3.3e-12  Score=63.42  Aligned_cols=42  Identities=29%  Similarity=0.514  Sum_probs=37.0

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            466788889999999999999999999999999999999884

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.5e-12  Score=65.11  Aligned_cols=44  Identities=32%  Similarity=0.484  Sum_probs=39.3

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            46778889999999999999999999999999999999999964

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.21  E-value=2.7e-12  Score=65.09  Aligned_cols=44  Identities=32%  Similarity=0.524  Sum_probs=39.0

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999864

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=1.8e-12  Score=65.71  Aligned_cols=43  Identities=30%  Similarity=0.401  Sum_probs=35.2

Q ss_pred             HhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           51 IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        51 ~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      +++|.++++|.|.+|++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567778888888888888888888888888888888888776

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.9e-12  Score=64.95  Aligned_cols=43  Identities=33%  Similarity=0.481  Sum_probs=37.9

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            6778888899999999999999999999999999999999863

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.8e-12  Score=64.95  Aligned_cols=44  Identities=39%  Similarity=0.590  Sum_probs=39.2

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            46778889999999999999999999999999999999999864

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.5e-12  Score=65.13  Aligned_cols=44  Identities=36%  Similarity=0.594  Sum_probs=38.9

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778888999999999999999999999999999999999864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.21  E-value=2.8e-11  Score=70.26  Aligned_cols=57  Identities=32%  Similarity=0.737  Sum_probs=52.9

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCC--CceecccchhhcCCchhHHHhhh-hhcCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGE--KPYKCTYCERRFKQLSHVQQHTR-LHTVE   85 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~--~~~~C~~c~~~f~~~~~l~~H~~-~h~~~   85 (129)
                      +++|.|..|++.|.....|..|++.|.+.  ++|.|.+|++.|.....|..|++ .|.++
T Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           33 EKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHhcCCC
Confidence            57899999999999999999999999987  89999999999999999999986 77765

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.5e-12  Score=65.17  Aligned_cols=44  Identities=39%  Similarity=0.566  Sum_probs=38.4

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.6e-12  Score=65.09  Aligned_cols=44  Identities=34%  Similarity=0.550  Sum_probs=38.6

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46778888899999999999999999999999999999999864

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.8e-12  Score=64.94  Aligned_cols=44  Identities=34%  Similarity=0.570  Sum_probs=38.7

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999864

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.6e-12  Score=65.07  Aligned_cols=44  Identities=39%  Similarity=0.576  Sum_probs=38.6

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.2e-12  Score=64.82  Aligned_cols=44  Identities=39%  Similarity=0.553  Sum_probs=39.0

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999964

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.6e-12  Score=65.03  Aligned_cols=44  Identities=32%  Similarity=0.511  Sum_probs=38.8

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999864

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.9e-12  Score=64.37  Aligned_cols=44  Identities=36%  Similarity=0.560  Sum_probs=39.4

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36778889999999999999999999999999999999999964

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.4e-12  Score=64.69  Aligned_cols=44  Identities=36%  Similarity=0.619  Sum_probs=38.6

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            46778888899999999999999999999999999999999863

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.2e-12  Score=62.96  Aligned_cols=42  Identities=33%  Similarity=0.588  Sum_probs=36.1

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456788888999999999999999999999999999998884

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4e-12  Score=64.46  Aligned_cols=43  Identities=37%  Similarity=0.592  Sum_probs=37.4

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5678888889999999999999999999999999999998863

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.5e-12  Score=64.60  Aligned_cols=44  Identities=25%  Similarity=0.451  Sum_probs=37.6

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888888999999999999999999999999999998863

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.5e-12  Score=64.19  Aligned_cols=44  Identities=30%  Similarity=0.461  Sum_probs=38.6

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999863

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4e-12  Score=64.43  Aligned_cols=44  Identities=30%  Similarity=0.469  Sum_probs=38.5

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999863

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.7e-12  Score=63.18  Aligned_cols=41  Identities=37%  Similarity=0.637  Sum_probs=36.8

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccch
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC   90 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C   90 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67788888999999999999999999999999999999987

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.19  E-value=3.6e-11  Score=70.35  Aligned_cols=56  Identities=36%  Similarity=0.782  Sum_probs=52.7

Q ss_pred             CCCcccc--cchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcC
Q psy553           29 NKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        29 ~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|++
T Consensus        43 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           43 EKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             CCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHhCC
Confidence            5789996  5999999999999999999999999999999999999999999999864

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.5e-12  Score=64.56  Aligned_cols=44  Identities=36%  Similarity=0.585  Sum_probs=39.1

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999863

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.19  E-value=4.8e-12  Score=63.83  Aligned_cols=42  Identities=33%  Similarity=0.469  Sum_probs=29.2

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhh
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQIL   94 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~   94 (129)
                      .|.++++|.|.+|++.|.....|..|+++|+++++|.|++|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            455666777777777777777777777777777777777664

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.4e-12  Score=63.54  Aligned_cols=43  Identities=37%  Similarity=0.549  Sum_probs=38.6

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            3677889999999999999999999999999999999999884

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=5.7e-13  Score=73.76  Aligned_cols=61  Identities=13%  Similarity=0.209  Sum_probs=55.2

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      ..++++|.|..|++.|.....|..       .++|.|..|++.|.....|..|+++|++++||.|.+|
T Consensus        13 h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           13 HLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            345789999999999998877765       6899999999999999999999999999999999987

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.6e-12  Score=64.61  Aligned_cols=44  Identities=36%  Similarity=0.612  Sum_probs=39.0

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46778889999999999999999999999999999999999863

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.7e-12  Score=64.17  Aligned_cols=44  Identities=34%  Similarity=0.503  Sum_probs=39.6

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999963

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=2.4e-11  Score=63.67  Aligned_cols=48  Identities=38%  Similarity=0.571  Sum_probs=43.3

Q ss_pred             CCCCCCCCcccccchhhccChHHHHHHHh-hcCCCCceecccchhhcCC
Q psy553           24 GGLEANKPHQCQQCLKSFSSNHQLVQHIR-VHTGEKPYKCTYCERRFKQ   71 (129)
Q Consensus        24 ~~~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~C~~c~~~f~~   71 (129)
                      ....++++|.|..|++.|.....|..|++ +|.+++||.|.+|++.|.+
T Consensus         5 ~~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            5 SSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            34556799999999999999999999997 8999999999999999865

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=3.7e-12  Score=63.81  Aligned_cols=43  Identities=37%  Similarity=0.463  Sum_probs=38.0

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4677888889999999999999999999999999999999884

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.6e-12  Score=64.20  Aligned_cols=44  Identities=30%  Similarity=0.461  Sum_probs=37.4

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36677888888999999999998899999999998889998864

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=4.4e-12  Score=64.22  Aligned_cols=44  Identities=34%  Similarity=0.541  Sum_probs=38.4

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888899999999999999999999999999999999863

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.3e-12  Score=63.69  Aligned_cols=42  Identities=36%  Similarity=0.656  Sum_probs=36.8

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            667788888999999999999999999999999999999886

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4.9e-12  Score=63.39  Aligned_cols=43  Identities=26%  Similarity=0.457  Sum_probs=38.2

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3677888999999999999999999999999999999999884

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=6.9e-12  Score=62.89  Aligned_cols=43  Identities=33%  Similarity=0.518  Sum_probs=38.7

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4677889999999999999999999999999999999999884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=8.6e-12  Score=62.53  Aligned_cols=43  Identities=23%  Similarity=0.378  Sum_probs=38.6

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            3677888999999999999999999999999999999999884

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=7.1e-12  Score=63.48  Aligned_cols=43  Identities=28%  Similarity=0.397  Sum_probs=38.8

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcC-CCccchh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV-EGVNSCL   91 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~-~~~y~C~   91 (129)
                      .|+++|.+++||.|..|++.|.....|..|+++|++ ++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            367788899999999999999999999999999999 9999986

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=6.6e-12  Score=62.29  Aligned_cols=41  Identities=41%  Similarity=0.723  Sum_probs=36.8

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccch
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC   90 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C   90 (129)
                      |+++|.+++||.|..|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56778888999999999999999999999999999999987

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=8e-12  Score=62.02  Aligned_cols=41  Identities=39%  Similarity=0.737  Sum_probs=36.3

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccch
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC   90 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C   90 (129)
                      |+++|.+++||.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56778888899999999999999999999999999999887

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=9.3e-12  Score=63.02  Aligned_cols=42  Identities=33%  Similarity=0.595  Sum_probs=35.7

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566788888888888888888888888888888888888885

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.15  E-value=5.5e-11  Score=68.09  Aligned_cols=55  Identities=35%  Similarity=0.808  Sum_probs=51.8

Q ss_pred             CCCcccc--cchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhc
Q psy553           29 NKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        29 ~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|.
T Consensus        33 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           33 EKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             SCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGGC
T ss_pred             CCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhhC
Confidence            6789997  599999999999999999999999999999999999999999999873

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.15  E-value=9e-12  Score=61.74  Aligned_cols=41  Identities=29%  Similarity=0.501  Sum_probs=35.7

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccch
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC   90 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C   90 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56678888899999999999999999999999999999887

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=7e-12  Score=62.85  Aligned_cols=43  Identities=26%  Similarity=0.475  Sum_probs=38.8

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677889999999999999999999999999999999999883

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.1e-12  Score=63.74  Aligned_cols=44  Identities=32%  Similarity=0.573  Sum_probs=38.8

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|..
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36778888999999999999999999999999999999999863

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=6.5e-12  Score=63.58  Aligned_cols=43  Identities=26%  Similarity=0.386  Sum_probs=39.5

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .|+++|.+++||.|.+|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999999999985

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.14  E-value=2.6e-11  Score=74.35  Aligned_cols=55  Identities=29%  Similarity=0.474  Sum_probs=52.5

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ++||.|..|++.|.....|..|+++|  .+||.|..|++.|.....|..|+++|++.
T Consensus        72 ~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           72 ISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            68999999999999999999999999  78999999999999999999999999875

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=7.6e-12  Score=63.28  Aligned_cols=43  Identities=30%  Similarity=0.493  Sum_probs=38.1

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .|+++|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3677888889999999999999999999999999999999986

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.14  E-value=5e-12  Score=66.33  Aligned_cols=51  Identities=16%  Similarity=0.225  Sum_probs=45.5

Q ss_pred             hhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccc
Q psy553           39 KSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNS   89 (129)
Q Consensus        39 ~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~   89 (129)
                      +.|.....|..|++.|.++++|.|.+|++.|.....|..|+++|++++||.
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            346666678889999999999999999999999999999999999999984

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.2e-11  Score=62.01  Aligned_cols=42  Identities=21%  Similarity=0.283  Sum_probs=35.0

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      |+++|.++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            566778888888888888888888888888888888888874

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=1.1e-11  Score=63.15  Aligned_cols=44  Identities=30%  Similarity=0.419  Sum_probs=35.1

Q ss_pred             HHhhcCCCCceecc--cchhhcCCchhHHHhhhhhcCCCccchhhh
Q psy553           50 HIRVHTGEKPYKCT--YCERRFKQLSHVQQHTRLHTVEGVNSCLQI   93 (129)
Q Consensus        50 h~~~h~~~~~~~C~--~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C   93 (129)
                      |.++|.++++|.|.  .|++.|.....|..|+++|++++||.|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34567778888887  788888888888888888888888888776

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=2.4e-11  Score=60.92  Aligned_cols=42  Identities=31%  Similarity=0.434  Sum_probs=37.8

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccch
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC   90 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C   90 (129)
                      .|+++|.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            367788899999999999999999999999999999999987

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.11  E-value=7.4e-12  Score=70.38  Aligned_cols=64  Identities=23%  Similarity=0.426  Sum_probs=54.8

Q ss_pred             CCCCceeccc--chhhcCCchhHHHhhh-hhcCCCccchhh--hhhhhhccc-cCcC----CCCCCeeEeeccc
Q psy553           55 TGEKPYKCTY--CERRFKQLSHVQQHTR-LHTVEGVNSCLQ--ILSLWIQLD-LKDE----PRNRNYVVRFSWW  118 (129)
Q Consensus        55 ~~~~~~~C~~--c~~~f~~~~~l~~H~~-~h~~~~~y~C~~--C~~~f~~~~-l~~h----~~~~~~~~~~~~~  118 (129)
                      ++.++|.|..  |++.|.....|..|++ .|.++++|.|.+  |++.|.... |..|    .++++|.|.++..
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k   76 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGP   76 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCC
Confidence            4568899987  9999999999999999 799999999999  999999985 7766    5678888776543

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=3.5e-12  Score=69.63  Aligned_cols=51  Identities=22%  Similarity=0.382  Sum_probs=46.3

Q ss_pred             CCCCceecccchhhcCCchhHHHhhhhhcCCCccchh-hhhhhhhccc-cCcCCC
Q psy553           55 TGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL-QILSLWIQLD-LKDEPR  107 (129)
Q Consensus        55 ~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~-~C~~~f~~~~-l~~h~~  107 (129)
                      .+.+||.|..|++.|. ...|..|+++ ++++||.|. +|++.|..++ |..|++
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~   58 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLK   58 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHH
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHH
Confidence            4568999999999999 9999999999 999999999 9999999985 888854

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.8e-11  Score=61.68  Aligned_cols=41  Identities=32%  Similarity=0.603  Sum_probs=30.0

Q ss_pred             HhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           51 IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        51 ~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .++|.++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            34566777777777777777777777777777777777775

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=2.1e-11  Score=61.73  Aligned_cols=41  Identities=32%  Similarity=0.414  Sum_probs=30.9

Q ss_pred             HhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           51 IRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        51 ~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      +++|.++++|.|.+|++.|.....|..|+++|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45567777777777777777777777777777777777775

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.08  E-value=9.4e-11  Score=59.83  Aligned_cols=43  Identities=30%  Similarity=0.447  Sum_probs=39.1

Q ss_pred             CCCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchh
Q psy553           25 GLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCER   67 (129)
Q Consensus        25 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~   67 (129)
                      ....+++|.|..|++.|.....|..|+++|.+++||.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3455789999999999999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.07  E-value=4.3e-11  Score=59.69  Aligned_cols=39  Identities=18%  Similarity=0.400  Sum_probs=28.9

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchh
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      .|.++++|.|..|++.|.....|..|+++|++++||.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            456667777777777777777777777777777777775

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=7e-11  Score=58.19  Aligned_cols=39  Identities=31%  Similarity=0.628  Sum_probs=31.3

Q ss_pred             hhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccch
Q psy553           52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC   90 (129)
Q Consensus        52 ~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C   90 (129)
                      ++|.++++|.|.+|++.|.....|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            356777888888888888888888888888888888876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.06  E-value=1.8e-11  Score=67.69  Aligned_cols=54  Identities=28%  Similarity=0.403  Sum_probs=48.0

Q ss_pred             cCCCCceeccc--chhhcCCchhHHHhhhhhcCCCccchhh--hhhhhhccc-cCcCCC
Q psy553           54 HTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVEGVNSCLQ--ILSLWIQLD-LKDEPR  107 (129)
Q Consensus        54 h~~~~~~~C~~--c~~~f~~~~~l~~H~~~h~~~~~y~C~~--C~~~f~~~~-l~~h~~  107 (129)
                      ....++|.|..  |++.|.....|..|+++|++++||.|.+  |++.|...+ |.+|++
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            34567899988  9999999999999999999999999965  999999986 888864

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.99  E-value=4.5e-10  Score=56.36  Aligned_cols=41  Identities=22%  Similarity=0.395  Sum_probs=38.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccch
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCE   66 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~   66 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|+.|+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            45678999999999999999999999999999999999885

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=6e-10  Score=56.09  Aligned_cols=41  Identities=39%  Similarity=0.602  Sum_probs=37.5

Q ss_pred             CCCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           25 GLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        25 ~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ...++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34567899999999999999999999999999999999876

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=9.1e-10  Score=55.46  Aligned_cols=40  Identities=40%  Similarity=0.651  Sum_probs=37.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            7 GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             cCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4557899999999999999999999999999999999876

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.95  E-value=9.1e-10  Score=55.45  Aligned_cols=40  Identities=40%  Similarity=0.569  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            7 GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=9.9e-10  Score=55.32  Aligned_cols=40  Identities=33%  Similarity=0.495  Sum_probs=37.1

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            7 GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4567899999999999999999999999999999999876

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1e-09  Score=55.28  Aligned_cols=40  Identities=35%  Similarity=0.606  Sum_probs=37.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            7 GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567899999999999999999999999999999999876

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=9.6e-10  Score=55.33  Aligned_cols=40  Identities=38%  Similarity=0.633  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            7 GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=1.2e-09  Score=54.98  Aligned_cols=40  Identities=43%  Similarity=0.625  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            7 GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1.1e-09  Score=55.10  Aligned_cols=40  Identities=38%  Similarity=0.576  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            7 GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.93  E-value=1.2e-09  Score=55.05  Aligned_cols=40  Identities=38%  Similarity=0.584  Sum_probs=37.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            7 GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=9.9e-10  Score=55.31  Aligned_cols=40  Identities=35%  Similarity=0.466  Sum_probs=37.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            7 GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4457899999999999999999999999999999999876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=1.7e-09  Score=54.36  Aligned_cols=40  Identities=38%  Similarity=0.549  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            7 GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=1.1e-09  Score=54.62  Aligned_cols=40  Identities=35%  Similarity=0.529  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|.+|
T Consensus         5 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            5 SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             cCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=6.5e-10  Score=56.02  Aligned_cols=40  Identities=45%  Similarity=0.580  Sum_probs=37.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            7 GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567899999999999999999999999999999999876

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.4e-09  Score=54.67  Aligned_cols=40  Identities=38%  Similarity=0.611  Sum_probs=37.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|++.|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            7 GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3557899999999999999999999999999999999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.1e-09  Score=55.03  Aligned_cols=40  Identities=38%  Similarity=0.633  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            7 GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.91  E-value=1.3e-09  Score=54.89  Aligned_cols=40  Identities=45%  Similarity=0.726  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            7 GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             cCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.91  E-value=9.8e-10  Score=55.29  Aligned_cols=40  Identities=33%  Similarity=0.465  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            7 GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             SCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            3457899999999999999999999999999999999876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.4e-09  Score=54.69  Aligned_cols=40  Identities=33%  Similarity=0.555  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            7 GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.7e-09  Score=54.32  Aligned_cols=40  Identities=40%  Similarity=0.683  Sum_probs=37.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            7 GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.4e-09  Score=54.74  Aligned_cols=40  Identities=35%  Similarity=0.607  Sum_probs=37.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            7 GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.3e-09  Score=54.87  Aligned_cols=40  Identities=35%  Similarity=0.588  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            7 GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             cCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.90  E-value=8.7e-10  Score=55.44  Aligned_cols=40  Identities=43%  Similarity=0.585  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            7 GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             CCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.4e-09  Score=54.65  Aligned_cols=40  Identities=40%  Similarity=0.634  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            7 GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.4e-09  Score=54.74  Aligned_cols=39  Identities=38%  Similarity=0.596  Sum_probs=36.4

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            8 TGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            457899999999999999999999999999999999876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1e-09  Score=55.18  Aligned_cols=40  Identities=38%  Similarity=0.615  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            7 GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             TTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.2e-09  Score=55.01  Aligned_cols=40  Identities=38%  Similarity=0.634  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            7 GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.1e-09  Score=55.03  Aligned_cols=40  Identities=43%  Similarity=0.754  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            7 GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             cCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=1.6e-09  Score=54.42  Aligned_cols=40  Identities=33%  Similarity=0.485  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            7 GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1e-09  Score=55.21  Aligned_cols=40  Identities=40%  Similarity=0.681  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            7 GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.3e-09  Score=54.87  Aligned_cols=40  Identities=33%  Similarity=0.583  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            7 GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             SCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             cCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.7e-09  Score=54.37  Aligned_cols=40  Identities=40%  Similarity=0.594  Sum_probs=37.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            7 GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            4557899999999999999999999999999999999876

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.4e-09  Score=54.74  Aligned_cols=39  Identities=41%  Similarity=0.650  Sum_probs=36.4

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            8 TGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            457899999999999999999999999999999999876

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=1.2e-09  Score=54.90  Aligned_cols=39  Identities=49%  Similarity=0.819  Sum_probs=36.4

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            8 TGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            457899999999999999999999999999999999876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=2.1e-09  Score=54.01  Aligned_cols=40  Identities=28%  Similarity=0.426  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||+|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            7 GSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             SSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.89  E-value=1.3e-09  Score=54.79  Aligned_cols=40  Identities=43%  Similarity=0.614  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            7 GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.6e-09  Score=54.47  Aligned_cols=39  Identities=41%  Similarity=0.681  Sum_probs=36.4

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            8 SGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            457899999999999999999999999999999999876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.88  E-value=1.3e-09  Score=54.91  Aligned_cols=39  Identities=41%  Similarity=0.721  Sum_probs=36.5

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            8 SSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            457899999999999999999999999999999999876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.88  E-value=2e-09  Score=54.06  Aligned_cols=40  Identities=40%  Similarity=0.613  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            7 GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.4e-09  Score=54.75  Aligned_cols=40  Identities=30%  Similarity=0.546  Sum_probs=36.7

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            7 GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             TSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999875

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.88  E-value=9.6e-10  Score=53.39  Aligned_cols=37  Identities=19%  Similarity=0.519  Sum_probs=27.3

Q ss_pred             cCCCCceecccchhhcCCchhHHHhhhhhcCCCccch
Q psy553           54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC   90 (129)
Q Consensus        54 h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C   90 (129)
                      |.++++|.|.+|++.|.....|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3456777777777777777777777777777777765

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.4e-09  Score=54.70  Aligned_cols=40  Identities=30%  Similarity=0.475  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            7 GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=1.2e-09  Score=54.93  Aligned_cols=40  Identities=38%  Similarity=0.531  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            7 GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=55.03  Aligned_cols=40  Identities=43%  Similarity=0.662  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            7 GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=1.5e-09  Score=54.52  Aligned_cols=40  Identities=35%  Similarity=0.448  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|..|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            7 GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.1e-09  Score=55.17  Aligned_cols=40  Identities=33%  Similarity=0.615  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            7 GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=1.7e-09  Score=54.41  Aligned_cols=40  Identities=45%  Similarity=0.707  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            7 GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.4e-09  Score=54.79  Aligned_cols=40  Identities=25%  Similarity=0.489  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            7 GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=2.9e-09  Score=53.67  Aligned_cols=40  Identities=40%  Similarity=0.636  Sum_probs=36.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHh-hcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIR-VHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|++ +|.+++||.|..|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            7 GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            345789999999999999999999999 9999999999876

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=1.1e-09  Score=55.07  Aligned_cols=40  Identities=40%  Similarity=0.647  Sum_probs=36.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            7 GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999876

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=2.5e-09  Score=53.53  Aligned_cols=39  Identities=41%  Similarity=0.657  Sum_probs=35.7

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|.+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            7 GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            456789999999999999999999999999999999963

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=98.85  E-value=3.1e-09  Score=59.99  Aligned_cols=52  Identities=31%  Similarity=0.530  Sum_probs=48.5

Q ss_pred             CCCccccc--chhhccChHHHHHHHhhcCCCCceeccc---chhhcCCchhHHHhhhhhc
Q psy553           29 NKPHQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCTY---CERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        29 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~C~~---c~~~f~~~~~l~~H~~~h~   83 (129)
                      +++|.|..  |++.|.....|..|++.|.+   |.|..   |++.|.....|..|+++|+
T Consensus        29 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           29 QLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             TCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             CCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHHHHHHHhcC
Confidence            57899988  99999999999999999988   99999   9999999999999998763

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=6.1e-11  Score=66.50  Aligned_cols=58  Identities=16%  Similarity=0.181  Sum_probs=42.8

Q ss_pred             HHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccccCcCC
Q psy553           47 LVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDEP  106 (129)
Q Consensus        47 l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~l~~h~  106 (129)
                      |..|++.+.+.+++.|..|+..| ....|..|+ .+.+++||.|..|++.|...+|..|.
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~~~~l~~H~   62 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVLVKDLKTHP   62 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEETTGGGTHH
T ss_pred             HHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCcHHHHHHHH
Confidence            45666677777788888887777 467777787 67778888888888877766677663

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=4.1e-09  Score=52.96  Aligned_cols=40  Identities=40%  Similarity=0.727  Sum_probs=36.4

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            7 GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3457899999999999999999999999999999999864

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=2.2e-09  Score=53.94  Aligned_cols=39  Identities=36%  Similarity=0.689  Sum_probs=36.0

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+|
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            8 TGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            457899999999999999999999999999999999864

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=5.3e-09  Score=52.59  Aligned_cols=39  Identities=36%  Similarity=0.629  Sum_probs=35.6

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            7 GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            355789999999999999999999999999999999963

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.81  E-value=4.9e-09  Score=51.99  Aligned_cols=39  Identities=21%  Similarity=0.272  Sum_probs=35.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            5 SSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            455789999999999999999999999999999999963

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.79  E-value=5.7e-10  Score=64.65  Aligned_cols=55  Identities=13%  Similarity=0.186  Sum_probs=47.2

Q ss_pred             ceecccchhhcCCchhHHHhhhh-hcCCCc--------cchhhhhhhhhccc-cCcC----CCCCCeeE
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRL-HTVEGV--------NSCLQILSLWIQLD-LKDE----PRNRNYVV  113 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~-h~~~~~--------y~C~~C~~~f~~~~-l~~h----~~~~~~~~  113 (129)
                      .+.|..|++.|.....|..|+++ |.++++        |.|.+|++.|.... |..|    .++++|.|
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   93 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPS   93 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSS
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            46899999999999999999998 999888        99999999999985 7666    45666654

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=5.6e-09  Score=52.48  Aligned_cols=39  Identities=41%  Similarity=0.662  Sum_probs=35.7

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            7 GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            456789999999999999999999999999999999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=6.6e-09  Score=52.54  Aligned_cols=40  Identities=33%  Similarity=0.497  Sum_probs=36.6

Q ss_pred             CCCCCCcccc--cchhhccChHHHHHHHhhcCCCCceecccc
Q psy553           26 LEANKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPYKCTYC   65 (129)
Q Consensus        26 ~~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c   65 (129)
                      ..++++|.|.  .|++.|.....|..|+++|.+++||+|..|
T Consensus         7 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            7 GTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3557899998  899999999999999999999999999876

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=8.5e-09  Score=51.76  Aligned_cols=39  Identities=36%  Similarity=0.629  Sum_probs=35.7

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            7 GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             cCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            345789999999999999999999999999999999974

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2.3e-09  Score=51.27  Aligned_cols=36  Identities=19%  Similarity=0.467  Sum_probs=26.0

Q ss_pred             hhcCCCCceecccchhhcCCchhHHHhhhhhcCCCc
Q psy553           52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV   87 (129)
Q Consensus        52 ~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~   87 (129)
                      ++|.++++|.|..|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            356667777777777777777777777777777654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.1e-08  Score=51.33  Aligned_cols=39  Identities=31%  Similarity=0.625  Sum_probs=35.6

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            7 GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345789999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=6.6e-09  Score=50.83  Aligned_cols=37  Identities=35%  Similarity=0.597  Sum_probs=34.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceec
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC   62 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C   62 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            5 SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             cCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            3457899999999999999999999999999999987

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.76  E-value=4e-09  Score=57.76  Aligned_cols=35  Identities=26%  Similarity=0.630  Sum_probs=17.0

Q ss_pred             CCCCccccc--chhhccChHHHHHHH-hhcCCCCceec
Q psy553           28 ANKPHQCQQ--CLKSFSSNHQLVQHI-RVHTGEKPYKC   62 (129)
Q Consensus        28 ~~~~~~C~~--C~~~f~~~~~l~~h~-~~h~~~~~~~C   62 (129)
                      +++||.|.+  |++.|.....|..|+ ++|++++|+.|
T Consensus        24 GEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           24 PYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             CCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            345555533  555555555555554 34555555444

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.1e-08  Score=51.39  Aligned_cols=39  Identities=36%  Similarity=0.634  Sum_probs=35.7

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            7 GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            345789999999999999999999999999999999974

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1e-08  Score=51.45  Aligned_cols=38  Identities=45%  Similarity=0.738  Sum_probs=35.2

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.
T Consensus         7 h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            7 GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45578999999999999999999999999999999996

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=8.4e-09  Score=51.75  Aligned_cols=38  Identities=42%  Similarity=0.752  Sum_probs=35.2

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            8 TGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            45789999999999999999999999999999999974

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.74  E-value=7.9e-09  Score=51.89  Aligned_cols=39  Identities=46%  Similarity=0.723  Sum_probs=35.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            7 GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345789999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.1e-08  Score=51.37  Aligned_cols=39  Identities=33%  Similarity=0.618  Sum_probs=35.6

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            7 GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345789999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.73  E-value=8.8e-09  Score=50.60  Aligned_cols=37  Identities=32%  Similarity=0.661  Sum_probs=34.2

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      .++++|.|..|++.|.....|..|+++|.++++|.|.
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            6 SGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             SSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            4578999999999999999999999999999999884

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=9.2e-09  Score=51.58  Aligned_cols=39  Identities=46%  Similarity=0.726  Sum_probs=35.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            7 GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            345789999999999999999999999999999999964

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=8.8e-09  Score=51.66  Aligned_cols=39  Identities=38%  Similarity=0.667  Sum_probs=35.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            7 GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            345789999999999999999999999999999999964

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=1.5e-08  Score=50.34  Aligned_cols=38  Identities=29%  Similarity=0.492  Sum_probs=34.7

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.
T Consensus         7 h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            7 GAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            34578999999999999999999999999999999984

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=7.5e-09  Score=51.87  Aligned_cols=38  Identities=34%  Similarity=0.637  Sum_probs=35.2

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            8 TGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            45789999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1e-08  Score=51.46  Aligned_cols=39  Identities=38%  Similarity=0.675  Sum_probs=35.6

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            7 GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345789999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=1.2e-08  Score=51.25  Aligned_cols=38  Identities=47%  Similarity=0.797  Sum_probs=35.1

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            8 SGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            45789999999999999999999999999999999964

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=7.5e-09  Score=51.88  Aligned_cols=38  Identities=39%  Similarity=0.784  Sum_probs=35.2

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            8 TGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            45789999999999999999999999999999999964

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.72  E-value=7.2e-10  Score=63.98  Aligned_cols=45  Identities=13%  Similarity=0.289  Sum_probs=36.1

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhh
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQIL   94 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~   94 (129)
                      +.++|.++++|.|.+|++.|.....|..|+++|++++||.|..|.
T Consensus        16 ~~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~   60 (88)
T 1x6f_A           16 GNGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE   60 (88)
T ss_dssp             CCCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS
T ss_pred             cccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh
Confidence            345677888888888888888888888888888888888886543

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.5e-08  Score=50.75  Aligned_cols=39  Identities=31%  Similarity=0.539  Sum_probs=35.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|..
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            7 GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             cCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            345789999999999999999999999999999999963

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1e-08  Score=51.36  Aligned_cols=39  Identities=41%  Similarity=0.632  Sum_probs=35.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            7 GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             CCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345789999999999999999999999999999999973

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.7e-08  Score=50.66  Aligned_cols=38  Identities=39%  Similarity=0.634  Sum_probs=35.1

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            7 GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             cCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            34578999999999999999999999999999999986

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1e-08  Score=51.35  Aligned_cols=39  Identities=41%  Similarity=0.640  Sum_probs=35.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            7 GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            345789999999999999999999999999999999964

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.71  E-value=1.4e-08  Score=49.86  Aligned_cols=37  Identities=30%  Similarity=0.437  Sum_probs=34.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceec
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC   62 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C   62 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|
T Consensus         6 H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            6 SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3457899999999999999999999999999999987

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=1.2e-08  Score=51.16  Aligned_cols=38  Identities=42%  Similarity=0.607  Sum_probs=35.1

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|..
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            8 MGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            45789999999999999999999999999999999963

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.4e-08  Score=49.81  Aligned_cols=37  Identities=35%  Similarity=0.641  Sum_probs=34.1

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      .++++|.|..|++.|.....|..|+++|.++++|.|.
T Consensus         6 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            6 SGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4578999999999999999999999999999999883

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=7.3e-09  Score=51.93  Aligned_cols=38  Identities=42%  Similarity=0.752  Sum_probs=35.2

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.+
T Consensus         8 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            8 TGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            45789999999999999999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=1.2e-08  Score=50.62  Aligned_cols=38  Identities=37%  Similarity=0.550  Sum_probs=34.7

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            7 GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            34578999999999999999999999999999999884

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.69  E-value=6.3e-09  Score=49.67  Aligned_cols=36  Identities=33%  Similarity=0.707  Sum_probs=26.2

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      |+++|.+++||.|..|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            556677777777777777777777777777777653

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.3e-08  Score=49.86  Aligned_cols=36  Identities=47%  Similarity=0.814  Sum_probs=33.6

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceec
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC   62 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C   62 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|
T Consensus         7 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            7 GGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            457899999999999999999999999999999987

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=1.5e-08  Score=50.80  Aligned_cols=38  Identities=37%  Similarity=0.689  Sum_probs=35.1

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|..
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            8 TGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            45789999999999999999999999999999999963

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.4e-08  Score=50.99  Aligned_cols=39  Identities=36%  Similarity=0.486  Sum_probs=35.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|..
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            7 GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            345789999999999999999999999999999999963

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.6e-08  Score=50.09  Aligned_cols=38  Identities=34%  Similarity=0.633  Sum_probs=34.6

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            7 GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            34578999999999999999999999999999999884

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=1.4e-08  Score=49.92  Aligned_cols=37  Identities=32%  Similarity=0.605  Sum_probs=33.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceec
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC   62 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C   62 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            6 SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             cCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3457899999999999999999999999999999887

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=1.4e-08  Score=50.89  Aligned_cols=39  Identities=41%  Similarity=0.694  Sum_probs=35.4

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceeccc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTY   64 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~   64 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|..
T Consensus         7 H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            7 GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            345789999999999999999999999999999999963

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.68  E-value=1.3e-08  Score=47.93  Aligned_cols=34  Identities=24%  Similarity=0.581  Sum_probs=23.0

Q ss_pred             cCCCCceecccchhhcCCchhHHHhhhhhcCCCc
Q psy553           54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV   87 (129)
Q Consensus        54 h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~   87 (129)
                      |.++++|.|.+|++.|.....|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4566677777777777777777777777766654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.68  E-value=1.1e-08  Score=48.11  Aligned_cols=34  Identities=21%  Similarity=0.445  Sum_probs=22.7

Q ss_pred             cCCCCceecccchhhcCCchhHHHhhhhhcCCCc
Q psy553           54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGV   87 (129)
Q Consensus        54 h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~   87 (129)
                      |.++++|.|..|++.|.....|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            4556667777777777777777777776666654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.68  E-value=8.5e-09  Score=48.17  Aligned_cols=31  Identities=29%  Similarity=0.709  Sum_probs=20.9

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCCCccc
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVEGVNS   89 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~   89 (129)
                      ||.|.+|++.|.....|..|+++|++++||.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            5666666666666666777766666666664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=2e-08  Score=49.75  Aligned_cols=38  Identities=32%  Similarity=0.549  Sum_probs=34.7

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            7 GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             cCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            34578999999999999999999999999999999884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.67  E-value=1.6e-08  Score=50.15  Aligned_cols=37  Identities=22%  Similarity=0.493  Sum_probs=34.2

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            8 HTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4578999999999999999999999999999999884

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=1.2e-08  Score=50.03  Aligned_cols=37  Identities=30%  Similarity=0.564  Sum_probs=34.0

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceec
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC   62 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C   62 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|
T Consensus         6 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            6 SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             cCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            3457899999999999999999999999999999987

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.6e-08  Score=50.24  Aligned_cols=38  Identities=26%  Similarity=0.502  Sum_probs=34.6

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            7 GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             cCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            34578999999999999999999999999999999884

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=1.4e-08  Score=50.88  Aligned_cols=37  Identities=32%  Similarity=0.574  Sum_probs=34.6

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            8 TGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4578999999999999999999999999999999986

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=1.6e-08  Score=50.72  Aligned_cols=38  Identities=34%  Similarity=0.523  Sum_probs=34.9

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCC-CCceecc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTG-EKPYKCT   63 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~-~~~~~C~   63 (129)
                      ..++++|.|..|++.|.....|..|+++|.+ ++||.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            7 GQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             cCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            3457899999999999999999999999999 9999986

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.64  E-value=1.8e-09  Score=62.31  Aligned_cols=55  Identities=16%  Similarity=0.290  Sum_probs=47.2

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcC
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||+|..|    .....+..|+++|.+
T Consensus        20 H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           20 RLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADG   74 (88)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhccccc
Confidence            4567899999999999999999999999999999999765    456667778888876

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=1.9e-08  Score=50.44  Aligned_cols=38  Identities=29%  Similarity=0.610  Sum_probs=35.1

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      ..++++|.|..|++.|.....|..|+++|.++++|.|.
T Consensus         7 H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            7 GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             SSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34578999999999999999999999999999999996

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.64  E-value=7.4e-10  Score=57.82  Aligned_cols=39  Identities=15%  Similarity=0.160  Sum_probs=34.7

Q ss_pred             hhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcC
Q psy553           67 RRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        67 ~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                      +.|.....|..|+++|++++||.|.+|++.|.+.+ |..|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H   43 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRH   43 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHH
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHH
Confidence            46778888999999999999999999999999985 7776

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=1.9e-08  Score=50.35  Aligned_cols=37  Identities=41%  Similarity=0.716  Sum_probs=34.6

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            8 TGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4578999999999999999999999999999999996

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.61  E-value=2.7e-09  Score=57.36  Aligned_cols=48  Identities=13%  Similarity=0.367  Sum_probs=40.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHH
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQ   76 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~   76 (129)
                      ..+++||.|..|++.|.....|.   ++|.+++||.|..|++.|....++.
T Consensus         9 H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            9 STNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             cCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            34578999999999999887775   7899999999999999998766543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.61  E-value=6.9e-08  Score=52.87  Aligned_cols=39  Identities=18%  Similarity=0.336  Sum_probs=35.0

Q ss_pred             cCCCCceeccc--chhhcCCchhHHHhh-hhhcCCCccchhh
Q psy553           54 HTGEKPYKCTY--CERRFKQLSHVQQHT-RLHTVEGVNSCLQ   92 (129)
Q Consensus        54 h~~~~~~~C~~--c~~~f~~~~~l~~H~-~~h~~~~~y~C~~   92 (129)
                      .++++||+|..  |++.|.....|..|+ ++|++++||.|-.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            46789999975  999999999999997 6899999999853

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=2e-08  Score=49.80  Aligned_cols=38  Identities=24%  Similarity=0.428  Sum_probs=34.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|.
T Consensus         7 H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            7 GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            34578999999999999999999999999999999883

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=3e-08  Score=47.51  Aligned_cols=35  Identities=29%  Similarity=0.554  Sum_probs=25.6

Q ss_pred             cCCCCceecc--cchhhcCCchhHHHhhhhhcCCCcc
Q psy553           54 HTGEKPYKCT--YCERRFKQLSHVQQHTRLHTVEGVN   88 (129)
Q Consensus        54 h~~~~~~~C~--~c~~~f~~~~~l~~H~~~h~~~~~y   88 (129)
                      |.++++|.|.  .|++.|.....|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3456777777  4777777777777777777777776

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=5.6e-08  Score=48.21  Aligned_cols=37  Identities=30%  Similarity=0.489  Sum_probs=33.8

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCCCceec
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC   62 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C   62 (129)
                      ..++++|.|..|++.|.....|..|+++|.+++||.|
T Consensus         7 H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            7 GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             cCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            3457899999999999999999999999999999876

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.8e-08  Score=50.52  Aligned_cols=37  Identities=32%  Similarity=0.614  Sum_probs=34.4

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      .++++|.|..|++.|.....|..|+++|.+++||.|.
T Consensus         8 ~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            8 TGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             CCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4578999999999999999999999999999999985

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.53  E-value=4.9e-08  Score=47.09  Aligned_cols=35  Identities=23%  Similarity=0.455  Sum_probs=32.3

Q ss_pred             CCCCcccccchhhccChHHHHHHHhhcCCCCceec
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKC   62 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C   62 (129)
                      ++++|.|..|++.|.....|..|+++|.+++||.+
T Consensus         3 ~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            3 PPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            46899999999999999999999999999998865

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=4.3e-08  Score=46.66  Aligned_cols=34  Identities=26%  Similarity=0.473  Sum_probs=25.0

Q ss_pred             hcCCCCceecccchhhcCCc-hhHHHhhhhhcCCC
Q psy553           53 VHTGEKPYKCTYCERRFKQL-SHVQQHTRLHTVEG   86 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~-~~l~~H~~~h~~~~   86 (129)
                      +|.+++||.|..|++.|... ..|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            46667777777777777777 77777777777653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=5.1e-08  Score=46.11  Aligned_cols=32  Identities=31%  Similarity=0.669  Sum_probs=19.0

Q ss_pred             cCCCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        54 h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      |.+++||.|.+|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            45555666666666666666666666665554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=5e-08  Score=46.13  Aligned_cols=32  Identities=28%  Similarity=0.538  Sum_probs=19.2

Q ss_pred             cCCCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        54 h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      |.+++||.|.+|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            44555666666666666666666666666554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6.8e-08  Score=46.83  Aligned_cols=30  Identities=23%  Similarity=0.430  Sum_probs=14.9

Q ss_pred             CCCCceeccc--chhhcCCchhHHHhhhhhcC
Q psy553           55 TGEKPYKCTY--CERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        55 ~~~~~~~C~~--c~~~f~~~~~l~~H~~~h~~   84 (129)
                      .+++||+|..  |++.|.....|..|+++|++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg   36 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTA   36 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            3444555543  55555555555555555544

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.50  E-value=7.7e-08  Score=44.76  Aligned_cols=32  Identities=25%  Similarity=0.452  Sum_probs=29.7

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCCcee
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYK   61 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~   61 (129)
                      +||.|..|++.|.....|..|+++|.++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            57999999999999999999999999998874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.49  E-value=7.1e-08  Score=45.49  Aligned_cols=32  Identities=34%  Similarity=0.552  Sum_probs=18.8

Q ss_pred             cCCCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        54 h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      |.+++||.|..|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            44555666666666666666666666655554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.46  E-value=9.3e-08  Score=45.06  Aligned_cols=32  Identities=28%  Similarity=0.596  Sum_probs=16.8

Q ss_pred             cCCCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        54 h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      |.++++|.|.+|++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            34445555555555555555555555555544

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.44  E-value=5.2e-08  Score=46.51  Aligned_cols=33  Identities=15%  Similarity=0.291  Sum_probs=21.1

Q ss_pred             hcCCCCceecccchhhcCCchhHHHh-hhhhcCC
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQH-TRLHTVE   85 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H-~~~h~~~   85 (129)
                      +|.+++||.|..|++.|.....|..| ++.|+++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            45566666666666666666666666 6666543

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=4.5e-08  Score=54.59  Aligned_cols=57  Identities=23%  Similarity=0.370  Sum_probs=49.8

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      -..+++.|..|+..|. ...|..|+ .+.+.+|+.|..|+..|. ...|..|+.++++++
T Consensus        13 c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           13 CPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             CCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            4578999999999995 88899999 889999999999999877 488999999887753

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.42  E-value=1.5e-07  Score=44.38  Aligned_cols=31  Identities=39%  Similarity=0.760  Sum_probs=15.2

Q ss_pred             CCCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           55 TGEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        55 ~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      .++++|.|..|++.|.....|..|+++|+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            3444455555555555555555555554443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.42  E-value=1.3e-08  Score=47.11  Aligned_cols=30  Identities=17%  Similarity=0.443  Sum_probs=17.3

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCCCcc
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVEGVN   88 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y   88 (129)
                      ||.|..|++.|.....|..|+++|++++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            455555555555555555555555555554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.41  E-value=7.4e-08  Score=46.13  Aligned_cols=24  Identities=29%  Similarity=0.396  Sum_probs=12.1

Q ss_pred             CCCCcccccchhhccChHHHHHHH
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQHI   51 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h~   51 (129)
                      +++||.|..|++.|.....|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            344555555555555555555554

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.38  E-value=1.4e-07  Score=47.77  Aligned_cols=32  Identities=31%  Similarity=0.678  Sum_probs=16.0

Q ss_pred             cCCCCceecccchhhcCCchhHHHhhh-hhcCC
Q psy553           54 HTGEKPYKCTYCERRFKQLSHVQQHTR-LHTVE   85 (129)
Q Consensus        54 h~~~~~~~C~~c~~~f~~~~~l~~H~~-~h~~~   85 (129)
                      |.+++||.|.+|++.|.....|..|++ +|+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            344455555555555555555555555 55443

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.36  E-value=3.7e-07  Score=42.67  Aligned_cols=33  Identities=27%  Similarity=0.712  Sum_probs=29.5

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKP   59 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   59 (129)
                      .++++|.|..|++.|.....|..|++.|.+++|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            3 SGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            357899999999999999999999999988754

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.36  E-value=3.7e-07  Score=42.55  Aligned_cols=33  Identities=33%  Similarity=0.526  Sum_probs=29.5

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKP   59 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   59 (129)
                      .++++|.|..|++.|.....|..|++.|.+++|
T Consensus         3 ~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            3 SGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            356899999999999999999999999988764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=3.7e-07  Score=43.21  Aligned_cols=33  Identities=27%  Similarity=0.535  Sum_probs=29.8

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCCCc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGEKP   59 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~   59 (129)
                      .++++|.|..|++.|.....|..|+++|.+++|
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            5 SSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            457899999999999999999999999998764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.31  E-value=2.8e-07  Score=44.08  Aligned_cols=32  Identities=19%  Similarity=0.376  Sum_probs=28.6

Q ss_pred             cCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhh
Q psy553           54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQ   92 (129)
Q Consensus        54 h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~   92 (129)
                      +.+++||.|..|++.|...+.|..|+       ||.|.+
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            46789999999999999999999998       788864

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.30  E-value=5.8e-07  Score=43.45  Aligned_cols=32  Identities=25%  Similarity=0.351  Sum_probs=28.5

Q ss_pred             CCCCCCccccc--chhhccChHHHHHHHhhcCCC
Q psy553           26 LEANKPHQCQQ--CLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        26 ~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ..+++||.|..  |++.|..+..|..|+++|++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34579999986  999999999999999999875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.30  E-value=3.5e-07  Score=43.49  Aligned_cols=32  Identities=31%  Similarity=0.537  Sum_probs=18.9

Q ss_pred             cCCCCceeccc--chhhcCCchhHHHhhhhhcCC
Q psy553           54 HTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        54 h~~~~~~~C~~--c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      +.++++|.|.+  |++.|.....|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34555666653  666666666666666666554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=1.9e-07  Score=47.05  Aligned_cols=38  Identities=18%  Similarity=0.452  Sum_probs=31.3

Q ss_pred             HHHhhcCCCCceecc--cchhhcCCchhHHHhhhhhcCCC
Q psy553           49 QHIRVHTGEKPYKCT--YCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~--~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      .|...|.+++||.|.  .|++.|.....|..|+++|++++
T Consensus         8 ~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            8 DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            445568888999995  69999999999999999988764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.27  E-value=6e-07  Score=39.89  Aligned_cols=27  Identities=30%  Similarity=0.682  Sum_probs=17.3

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=5.5e-07  Score=40.21  Aligned_cols=28  Identities=36%  Similarity=0.867  Sum_probs=14.1

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcCC
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            3455555555555555555555555443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=9.7e-07  Score=41.36  Aligned_cols=32  Identities=38%  Similarity=0.603  Sum_probs=28.6

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ..++++|.|..|++.|.....|..|+++|.++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            34578999999999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.23  E-value=1.3e-06  Score=40.93  Aligned_cols=31  Identities=35%  Similarity=0.620  Sum_probs=28.2

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ..+++|.|..|++.|.....|..|+++|.++
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            5 SSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            4578999999999999999999999999875

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.22  E-value=6.4e-08  Score=44.69  Aligned_cols=31  Identities=23%  Similarity=0.368  Sum_probs=28.7

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCCce
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPY   60 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~   60 (129)
                      +||.|..|++.|.....|..|+++|.+++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5799999999999999999999999998876

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.21  E-value=1.5e-06  Score=47.25  Aligned_cols=36  Identities=31%  Similarity=0.414  Sum_probs=27.9

Q ss_pred             CCCCCCCCCcccccchhhccChHHHHHHHhhcCCCC
Q psy553           23 SGGLEANKPHQCQQCLKSFSSNHQLVQHIRVHTGEK   58 (129)
Q Consensus        23 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (129)
                      +.+..+++||.|..|++.|.....|..|+++|++..
T Consensus         5 ~~~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            5 SSGLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCSCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            334566788888888888888888888888888753

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=1.3e-06  Score=41.03  Aligned_cols=31  Identities=29%  Similarity=0.557  Sum_probs=28.2

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      .++++|.|..|++.|.....|..|+++|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            5 SSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            4578999999999999999999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=9.7e-07  Score=41.46  Aligned_cols=31  Identities=19%  Similarity=0.415  Sum_probs=28.0

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      .++++|.|..|++.|.....|..|+++|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            5 SSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            4578999999999999999999999999865

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=1.3e-06  Score=41.00  Aligned_cols=31  Identities=39%  Similarity=0.722  Sum_probs=28.1

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ..+++|.|..|++.|.....|..|+++|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            4568999999999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.19  E-value=9.7e-07  Score=39.35  Aligned_cols=28  Identities=29%  Similarity=0.644  Sum_probs=16.6

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCCC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      +|.|..|++.|.....|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            4556666666666666666666665543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.19  E-value=8.4e-07  Score=39.34  Aligned_cols=26  Identities=35%  Similarity=0.770  Sum_probs=12.6

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      ||.|..|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            34444455555444455555444444

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.19  E-value=7.6e-07  Score=39.43  Aligned_cols=27  Identities=33%  Similarity=0.811  Sum_probs=15.6

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            455555655555555566665555554

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=1.1e-06  Score=39.13  Aligned_cols=29  Identities=34%  Similarity=0.670  Sum_probs=26.5

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      +++|.|..|++.|.....|..|++.|.++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            47899999999999999999999999875

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=8.9e-07  Score=39.15  Aligned_cols=27  Identities=26%  Similarity=0.801  Sum_probs=16.7

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            556666666666666666666666554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.17  E-value=1.4e-06  Score=39.68  Aligned_cols=28  Identities=25%  Similarity=0.707  Sum_probs=15.6

Q ss_pred             Cceecc--cchhhcCCchhHHHhhhhhcCC
Q psy553           58 KPYKCT--YCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        58 ~~~~C~--~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      +||.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            345555  5555555555555555555544

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.16  E-value=9.6e-07  Score=42.00  Aligned_cols=33  Identities=24%  Similarity=0.525  Sum_probs=30.0

Q ss_pred             CCCCcccc--cchhhccChHHHHHHHhhcCCCCce
Q psy553           28 ANKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEKPY   60 (129)
Q Consensus        28 ~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~~~   60 (129)
                      ++++|.|.  .|++.|.....|..|+++|.++++|
T Consensus         3 ~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            46899999  5999999999999999999998875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.14  E-value=1.2e-06  Score=39.73  Aligned_cols=27  Identities=48%  Similarity=1.022  Sum_probs=14.7

Q ss_pred             ceecc--cchhhcCCchhHHHhhhhhcCC
Q psy553           59 PYKCT--YCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        59 ~~~C~--~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ||.|.  .|++.|.....|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555544

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.13  E-value=1.5e-06  Score=47.26  Aligned_cols=42  Identities=19%  Similarity=0.241  Sum_probs=34.7

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhh
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILS   95 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~   95 (129)
                      .+.+++||.|..|++.|.....|..|+++|+++.. .+.+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~-~~~~~~~   48 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL-QLGYIDL   48 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC-CCCSCCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc-ccccccC
Confidence            36678999999999999999999999999998743 4555543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.12  E-value=2.8e-06  Score=40.01  Aligned_cols=32  Identities=34%  Similarity=0.531  Sum_probs=28.1

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ..+++||.|..|++.|.....|..|++.|.++
T Consensus         6 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            6 STGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             TCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            34578999999999999999999999998763

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.11  E-value=2e-06  Score=38.04  Aligned_cols=28  Identities=32%  Similarity=0.746  Sum_probs=25.7

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ++|.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            4799999999999999999999999875

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.39  E-value=3.6e-07  Score=40.74  Aligned_cols=26  Identities=38%  Similarity=0.735  Sum_probs=11.6

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      ||.|..|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            34444444444444444444444443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.10  E-value=1.4e-06  Score=38.57  Aligned_cols=28  Identities=29%  Similarity=0.591  Sum_probs=25.7

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            5799999999999999999999999865

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.07  E-value=1.9e-06  Score=37.92  Aligned_cols=25  Identities=48%  Similarity=0.873  Sum_probs=12.8

Q ss_pred             CCcccccchhhccChHHHHHHHhhc
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVH   54 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h   54 (129)
                      ++|.|..|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h   26 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVH   26 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTS
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555444

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.07  E-value=1.9e-06  Score=40.63  Aligned_cols=31  Identities=29%  Similarity=0.539  Sum_probs=27.9

Q ss_pred             CCCCCcccccchhhccCh-HHHHHHHhhcCCC
Q psy553           27 EANKPHQCQQCLKSFSSN-HQLVQHIRVHTGE   57 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~-~~l~~h~~~h~~~   57 (129)
                      .++++|.|..|++.|... ..|..|+++|.++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            5 SSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            457899999999999999 9999999998765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=4.9e-07  Score=40.47  Aligned_cols=25  Identities=44%  Similarity=0.994  Sum_probs=10.7

Q ss_pred             ceecccchhhcCCchhHHHhhhhhc
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      ||.|..|++.|.....|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHT   27 (30)
Confidence            3444444444444444444444443

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.05  E-value=1.9e-06  Score=38.04  Aligned_cols=28  Identities=39%  Similarity=0.947  Sum_probs=25.6

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ++|.|..|++.|.....|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4799999999999999999999999775

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.05  E-value=2.3e-06  Score=37.39  Aligned_cols=25  Identities=28%  Similarity=0.658  Sum_probs=13.0

Q ss_pred             CCcccccchhhccChHHHHHHHhhc
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVH   54 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h   54 (129)
                      +||.|..|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            3455555555555555555555443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.05  E-value=2.2e-06  Score=38.29  Aligned_cols=27  Identities=26%  Similarity=0.711  Sum_probs=14.8

Q ss_pred             ceecccchhhcCCchhHHHh-hhhhcCC
Q psy553           59 PYKCTYCERRFKQLSHVQQH-TRLHTVE   85 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H-~~~h~~~   85 (129)
                      ||.|..|++.|.....|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45555555555555555555 4555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.05  E-value=2.1e-06  Score=37.76  Aligned_cols=27  Identities=37%  Similarity=0.885  Sum_probs=23.1

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcC
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +||.|..|++.|.....|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            678999999999999999999888754

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.04  E-value=1.8e-06  Score=37.83  Aligned_cols=25  Identities=28%  Similarity=0.543  Sum_probs=12.8

Q ss_pred             CCcccccchhhccChHHHHHHHhhc
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVH   54 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h   54 (129)
                      +||.|..|++.|.....|..|++.|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            3455555555555555555555443

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.04  E-value=2.1e-06  Score=37.40  Aligned_cols=25  Identities=44%  Similarity=0.895  Sum_probs=12.6

Q ss_pred             eecccchhhcCCchhHHHhhhhhcC
Q psy553           60 YKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      |.|..|++.|.....|..|+++|++
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            4455555555555555555554443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.03  E-value=3.6e-06  Score=38.25  Aligned_cols=29  Identities=34%  Similarity=0.814  Sum_probs=26.4

Q ss_pred             CCCcccc--cchhhccChHHHHHHHhhcCCC
Q psy553           29 NKPHQCQ--QCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        29 ~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ++||.|.  .|++.|.....|..|+++|.++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            3789999  8999999999999999999875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.03  E-value=2.9e-06  Score=37.70  Aligned_cols=29  Identities=28%  Similarity=0.458  Sum_probs=26.2

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEK   58 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (129)
                      ++|.|..|++.|.....|..|++.|.+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            47899999999999999999999988764

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.02  E-value=2.5e-06  Score=37.27  Aligned_cols=27  Identities=37%  Similarity=0.865  Sum_probs=23.0

Q ss_pred             CCceecccchhhcCCchhHHHhhhhhc
Q psy553           57 EKPYKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        57 ~~~~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      ++||.|..|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            368899999999999999999988764

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.02  E-value=2.1e-06  Score=37.60  Aligned_cols=25  Identities=36%  Similarity=0.788  Sum_probs=20.1

Q ss_pred             CceecccchhhcCCchhHHHhhhhh
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      +||.|..|++.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            5788888888888888888888766

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=2.1e-06  Score=37.83  Aligned_cols=28  Identities=32%  Similarity=0.762  Sum_probs=25.6

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5799999999999999999999998765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.00  E-value=3.4e-06  Score=42.51  Aligned_cols=33  Identities=27%  Similarity=0.527  Sum_probs=27.7

Q ss_pred             CCCCCcccccchhhccChHHHHHHHh-hcCCCCc
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIR-VHTGEKP   59 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~   59 (129)
                      .++++|.|..|++.|.....|..|++ +|.++..
T Consensus         3 t~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            3 DRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             TTTSCEECTTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            45789999999999999999999999 8987654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.99  E-value=4.1e-06  Score=37.80  Aligned_cols=28  Identities=43%  Similarity=0.853  Sum_probs=25.6

Q ss_pred             CCcccc--cchhhccChHHHHHHHhhcCCC
Q psy553           30 KPHQCQ--QCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        30 ~~~~C~--~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      +||.|.  .|++.|.....|..|+++|.++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            478998  8999999999999999999875

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.98  E-value=4.6e-06  Score=39.42  Aligned_cols=32  Identities=38%  Similarity=0.657  Sum_probs=28.1

Q ss_pred             CCCCCCccccc--chhhccChHHHHHHHhhcCCC
Q psy553           26 LEANKPHQCQQ--CLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        26 ~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ..++++|.|..  |++.|.....|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            34578999984  999999999999999999875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=4.1e-06  Score=39.59  Aligned_cols=31  Identities=26%  Similarity=0.383  Sum_probs=27.6

Q ss_pred             CCCCCcccccchhhccChHHHHHH-HhhcCCC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQH-IRVHTGE   57 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h-~~~h~~~   57 (129)
                      .+++||.|..|++.|.....|..| ++.|.+.
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            5 SSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            457899999999999999999999 8888764

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.20  E-value=1.1e-06  Score=39.13  Aligned_cols=28  Identities=50%  Similarity=0.939  Sum_probs=25.4

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            4799999999999999999999998765

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.18  E-value=1.2e-06  Score=39.19  Aligned_cols=29  Identities=41%  Similarity=0.852  Sum_probs=25.9

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ++||.|..|++.|.....|..|+++|.++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            36899999999999999999999988764

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.93  E-value=4.9e-06  Score=36.11  Aligned_cols=26  Identities=35%  Similarity=0.676  Sum_probs=23.4

Q ss_pred             CcccccchhhccChHHHHHHHhhcCC
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHTG   56 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (129)
                      ||.|..|++.|.....|..|+++|.+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            58999999999999999999998875

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.89  E-value=5.6e-06  Score=36.84  Aligned_cols=28  Identities=29%  Similarity=0.752  Sum_probs=25.1

Q ss_pred             CCcccccchhhccChHHHHHH-HhhcCCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQH-IRVHTGE   57 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h-~~~h~~~   57 (129)
                      ++|.|..|++.|.....|..| +++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            479999999999999999999 7888765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.04  E-value=2.4e-06  Score=36.96  Aligned_cols=20  Identities=15%  Similarity=0.165  Sum_probs=9.5

Q ss_pred             ccchhhhhhhhhccc-cCcCC
Q psy553           87 VNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        87 ~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      ||.|.+|++.|.+.+ |..|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~   22 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHI   22 (26)
Confidence            445555555555443 44443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.02  E-value=2.6e-06  Score=36.83  Aligned_cols=24  Identities=46%  Similarity=0.933  Sum_probs=11.3

Q ss_pred             ceecccchhhcCCchhHHHhhhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      ||.|..|++.|.....|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            344444444444444444444443

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.69  E-value=1.9e-05  Score=34.67  Aligned_cols=24  Identities=29%  Similarity=0.690  Sum_probs=11.3

Q ss_pred             Ccccc--cchhhccChHHHHHHHhhc
Q psy553           31 PHQCQ--QCLKSFSSNHQLVQHIRVH   54 (129)
Q Consensus        31 ~~~C~--~C~~~f~~~~~l~~h~~~h   54 (129)
                      +|.|.  .|++.|.....|..|+++|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H   27 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIH   27 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGG
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHh
Confidence            34444  4444444444444444444

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.67  E-value=2.2e-05  Score=34.41  Aligned_cols=27  Identities=30%  Similarity=0.687  Sum_probs=24.4

Q ss_pred             Cceecc--cchhhcCCchhHHHhhhhhcC
Q psy553           58 KPYKCT--YCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        58 ~~~~C~--~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      ++|.|.  .|++.|.....|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            478999  999999999999999999864

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.51  E-value=2.1e-05  Score=39.22  Aligned_cols=32  Identities=25%  Similarity=0.591  Sum_probs=28.0

Q ss_pred             CCCCCcccc--cchhhccChHHHHHHHhhcCCCC
Q psy553           27 EANKPHQCQ--QCLKSFSSNHQLVQHIRVHTGEK   58 (129)
Q Consensus        27 ~~~~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~   58 (129)
                      .++++|.|.  .|++.|.....|..|+++|.+++
T Consensus        14 ~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A           14 MPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             ETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             CCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            457899996  79999999999999999998753

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.90  E-value=0.0014  Score=35.00  Aligned_cols=48  Identities=23%  Similarity=0.425  Sum_probs=38.9

Q ss_pred             ccchhhccChHHHHHHHh-hcCCCC------ceecc--cchhhcCCchhHHHhhhhh
Q psy553           35 QQCLKSFSSNHQLVQHIR-VHTGEK------PYKCT--YCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        35 ~~C~~~f~~~~~l~~h~~-~h~~~~------~~~C~--~c~~~f~~~~~l~~H~~~h   82 (129)
                      ..|++.|.....|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            348999999999999984 687655      78886  6998888888899998753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.79  E-value=3.6e-05  Score=46.68  Aligned_cols=27  Identities=26%  Similarity=0.515  Sum_probs=14.2

Q ss_pred             cCCCCceecccchhhcCCchhHHHhhh
Q psy553           54 HTGEKPYKCTYCERRFKQLSHVQQHTR   80 (129)
Q Consensus        54 h~~~~~~~C~~c~~~f~~~~~l~~H~~   80 (129)
                      ++|.++|.|..|++.|.+...|..|++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHh
Confidence            344455555555555555555555544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.76  E-value=0.0021  Score=38.90  Aligned_cols=25  Identities=28%  Similarity=0.624  Sum_probs=12.5

Q ss_pred             CCCCcccccchhhccChHHHHHHHh
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQHIR   52 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h~~   52 (129)
                      ++++|.|..|++.|.....|..|++
T Consensus        47 GekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           47 GGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             GGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             CCcceEcccCcchhCCHHHHHHHHh
Confidence            3445555555555555555554443

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.67  E-value=0.062  Score=26.63  Aligned_cols=26  Identities=19%  Similarity=0.369  Sum_probs=21.4

Q ss_pred             CCcccccchhhccChHHHHHHHhhcC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHT   55 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~   55 (129)
                      .++.|+.|+..|.....|..||...-
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycC   36 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCC   36 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHC
T ss_pred             CceeCCcccccccchHHHHhhhhhcC
Confidence            66889999999999999999987443

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=93.83  E-value=0.06  Score=32.57  Aligned_cols=80  Identities=15%  Similarity=0.209  Sum_probs=49.8

Q ss_pred             CCCcccccchhhccChHHHHHHH--hhcCCC-Cceecc------cchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhc
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHI--RVHTGE-KPYKCT------YCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQ   99 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~--~~h~~~-~~~~C~------~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~   99 (129)
                      .+++.|..|...|.+...+..|.  +.|... +.+.+.      .-+..+....    +.....+.+.|-|.+|++.|..
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSS  105 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSS
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCC
Confidence            36789999999999999988887  344321 111110      0111222111    2234456778899999999998


Q ss_pred             cc-cCcCCCCCCee
Q psy553          100 LD-LKDEPRNRNYV  112 (129)
Q Consensus       100 ~~-l~~h~~~~~~~  112 (129)
                      .. +..|...+.|.
T Consensus       106 ~~~~~~H~~gk~H~  119 (127)
T 1zu1_A          106 PVVAESHYIGKTHI  119 (127)
T ss_dssp             HHHHHHHHTSHHHH
T ss_pred             HHHHHHHHCCHHHH
Confidence            85 87776555443

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=93.68  E-value=0.002  Score=34.39  Aligned_cols=44  Identities=16%  Similarity=0.144  Sum_probs=33.3

Q ss_pred             ccchhhcCCchhHHHhh-hhhcCCC------ccchh--hhhhhhhccc-cCcCC
Q psy553           63 TYCERRFKQLSHVQQHT-RLHTVEG------VNSCL--QILSLWIQLD-LKDEP  106 (129)
Q Consensus        63 ~~c~~~f~~~~~l~~H~-~~h~~~~------~y~C~--~C~~~f~~~~-l~~h~  106 (129)
                      ..|++.|.....|..|+ ..|.+.+      +|.|.  .|++.+.... |..|.
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hi   60 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHI   60 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhc
Confidence            35899999999999998 4787665      79996  6887766553 65553

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=92.25  E-value=0.01  Score=36.08  Aligned_cols=27  Identities=22%  Similarity=0.313  Sum_probs=22.3

Q ss_pred             CCceecccchhhcCCchhHHHhh--hhhc
Q psy553           57 EKPYKCTYCERRFKQLSHVQQHT--RLHT   83 (129)
Q Consensus        57 ~~~~~C~~c~~~f~~~~~l~~H~--~~h~   83 (129)
                      .+++.|.+|.-.|.+...+..|.  +.|.
T Consensus        30 ~~~~~C~~C~v~~~S~s~~~~H~~gkkH~   58 (127)
T 1zu1_A           30 FSDTQCKVCSAVLISESQKLAHYQSRKHA   58 (127)
T ss_dssp             BCSSEETTTTEECCSHHHHHHHHHCHHHH
T ss_pred             CCCCcCcCCCCEeCCHHHHHHHHCcHHHH
Confidence            46789999999999999999887  4453

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=91.44  E-value=0.087  Score=33.23  Aligned_cols=72  Identities=21%  Similarity=0.266  Sum_probs=51.8

Q ss_pred             Cccc--ccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccccCcC
Q psy553           31 PHQC--QQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDE  105 (129)
Q Consensus        31 ~~~C--~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~l~~h  105 (129)
                      ...|  ..|+.... ...+..|.... ...+..|+.|+..+ ....+..|....-..++-.|+.|+..+...+|..|
T Consensus        82 ~v~C~n~GC~~~~~-~~~l~~H~~~C-~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~~l~~H  155 (170)
T 3hcs_A           82 MVKCPNEGCLHKME-LRHLEDHQAHC-EFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFEDKEIH  155 (170)
T ss_dssp             EEECCSTTCCCEEE-GGGHHHHHTTC-TTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGGGHHHH
T ss_pred             ccCCCCCCCCceec-HhHHHHHHhcC-CceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHHHHHhH
Confidence            3456  34655443 44566776433 34578899898776 56678889876777888899999999999888777

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=90.11  E-value=0.12  Score=28.48  Aligned_cols=39  Identities=21%  Similarity=0.403  Sum_probs=20.1

Q ss_pred             CcccccchhhccChHHHHHHHhhcCCCCceecccchhhcC
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFK   70 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~   70 (129)
                      .|.|..|+..++ +..+..|.....+...|.|..|+..|.
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~   48 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFW   48 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEE
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeC
Confidence            455666665444 333455554444444455555555554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=89.02  E-value=0.27  Score=24.32  Aligned_cols=23  Identities=17%  Similarity=0.417  Sum_probs=20.1

Q ss_pred             CceecccchhhcCCchhHHHhhh
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTR   80 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~   80 (129)
                      ..+.|+.|+..|.....|..||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            56889999999999999999988

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=88.57  E-value=0.12  Score=32.52  Aligned_cols=47  Identities=19%  Similarity=0.354  Sum_probs=29.3

Q ss_pred             Cceecc--cchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccccCcCC
Q psy553           58 KPYKCT--YCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDEP  106 (129)
Q Consensus        58 ~~~~C~--~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~l~~h~  106 (129)
                      ....|.  .|...+. ...+..|.. .=.-++..|+.|+..+...+|..|.
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~~r~~l~~H~  129 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPFQKFHINIHI  129 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEEEGGGHHHHH
T ss_pred             cccCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHHHHHHHHHHh
Confidence            345663  4655443 345666654 2234567888888888777777774

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=87.85  E-value=0.22  Score=27.44  Aligned_cols=50  Identities=18%  Similarity=0.232  Sum_probs=38.8

Q ss_pred             CCCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccccCcCC
Q psy553           56 GEKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLDLKDEP  106 (129)
Q Consensus        56 ~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~l~~h~  106 (129)
                      ...-|.|..|+..+ -...+..|...-.+-..|.|-.|++.|...+...|.
T Consensus         7 ~MV~F~C~~Cgd~l-KK~kv~~H~~~Cr~~~~~SCIDC~~~F~~~~y~~Ht   56 (79)
T 1wjv_A            7 GMVFFTCNACGESV-KKIQVEKHVSNCRNCECLSCIDCGKDFWGDDYKSHV   56 (79)
T ss_dssp             CCCEEEESSSCCEE-ETTHHHHHHHHCTTCCEEEETTTTEEEEGGGTTTCC
T ss_pred             ceeEEEcCCCCCee-ecccchhHHhhCCCCCcEEecccCCeeCCCCEeCEe
Confidence            34568999999876 455688887655555679999999999987788884

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=83.58  E-value=0.27  Score=32.12  Aligned_cols=25  Identities=24%  Similarity=0.336  Sum_probs=17.1

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcCCCccchhhhhh
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILS   95 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~   95 (129)
                      ..|.|.+||..+.             |..|+.|++|+-
T Consensus       170 ~~~~C~~CG~i~~-------------g~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLCPICGYIHK-------------GEDFEKCPICFR  194 (202)
T ss_dssp             CEEECSSSCCEEE-------------SSCCSBCTTTCC
T ss_pred             cEEEECCCCCEEc-------------CcCCCCCCCCCC
Confidence            3578888886543             245688888874

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=82.79  E-value=0.46  Score=27.71  Aligned_cols=32  Identities=31%  Similarity=0.589  Sum_probs=21.3

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhcc
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQL  100 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~  100 (129)
                      .|++|..||..|.           -.-.+|-.|+.|...++..
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~Ie~   97 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSEWIEE   97 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCCBCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCCccCC
Confidence            5788888888871           1224567888887665543

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=82.52  E-value=0.4  Score=23.63  Aligned_cols=14  Identities=29%  Similarity=0.760  Sum_probs=7.4

Q ss_pred             ceecccchhhcCCc
Q psy553           59 PYKCTYCERRFKQL   72 (129)
Q Consensus        59 ~~~C~~c~~~f~~~   72 (129)
                      .|.|..|++.|...
T Consensus         3 iY~C~rCg~~fs~~   16 (48)
T 4ayb_P            3 VYRCGKCWKTFTDE   16 (48)
T ss_dssp             --CCCCTTTTCCCC
T ss_pred             EEEeeccCCCccHH
Confidence            35666666666544

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=82.22  E-value=0.78  Score=23.32  Aligned_cols=21  Identities=24%  Similarity=0.501  Sum_probs=17.6

Q ss_pred             cccccchhhccChHHHHHHHh
Q psy553           32 HQCQQCLKSFSSNHQLVQHIR   52 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~   52 (129)
                      -.|..|+..|..+..++.|+.
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            489999999988888888864

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=82.07  E-value=1.4  Score=20.40  Aligned_cols=21  Identities=19%  Similarity=0.491  Sum_probs=9.5

Q ss_pred             eecccchhhcCCchhHHHhhh
Q psy553           60 YKCTYCERRFKQLSHVQQHTR   80 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~   80 (129)
                      +.|..|.-+|.....+..|++
T Consensus         9 ~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            9 KYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             SEETTTTEECSSHHHHHHHHH
T ss_pred             CeeccccceehhhHHHhhhhe
Confidence            344444444444444444444

>1twf_L ABC10-alpha, DNA-directed RNA polymerases I, II, and III 7.7 K polypeptide; transcription, mRNA, multiprotein complex; HET: UTP; 2.30A {Saccharomyces cerevisiae} SCOP: g.41.9.2 PDB: 1i3q_L 1i6h_L 1k83_L* 1nik_L 1nt9_L 1pqv_L 1r5u_L 1r9s_L* 1r9t_L* 1sfo_L* 1twa_L* 1twc_L* 1i50_L* 1twg_L* 1twh_L* 1wcm_L 1y1v_L 1y1w_L 1y1y_L 1y77_L* ...

Probab=80.81  E-value=0.64  Score=25.07  Aligned_cols=28  Identities=21%  Similarity=0.533  Sum_probs=16.6

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCCceecccchhh
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERR   68 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~   68 (129)
                      -.|.|..||..|...          .+ .+..|..|+..
T Consensus        27 v~Y~C~~CG~~~e~~----------~~-d~irCp~CG~R   54 (70)
T 1twf_L           27 LKYICAECSSKLSLS----------RT-DAVRCKDCGHR   54 (70)
T ss_dssp             CCEECSSSCCEECCC----------TT-STTCCSSSCCC
T ss_pred             EEEECCCCCCcceeC----------CC-CCccCCCCCce
Confidence            457788888766532          11 23467777763

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=80.77  E-value=0.13  Score=27.81  Aligned_cols=31  Identities=6%  Similarity=-0.045  Sum_probs=14.2

Q ss_pred             HHHhhhhhcCCCccchhhhhhhhhccccCcC
Q psy553           75 VQQHTRLHTVEGVNSCLQILSLWIQLDLKDE  105 (129)
Q Consensus        75 l~~H~~~h~~~~~y~C~~C~~~f~~~~l~~h  105 (129)
                      |..|+...-..++..|..|+..|...+|..|
T Consensus        32 l~~H~~~~C~~r~v~C~~C~~~~~~~~l~~H   62 (76)
T 2yuc_A           32 LPAHLQHDCPKRRLKCEFCGCDFSGEAYESH   62 (76)
T ss_dssp             STTTTTTSCTTSCCCCSSSCCCCCHHHHHHT
T ss_pred             HHhhCHhhCCCcceECCCCCCccCHHHHHHH
Confidence            3444432233344455555555555444444

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=80.72  E-value=0.73  Score=21.13  Aligned_cols=22  Identities=14%  Similarity=0.445  Sum_probs=17.0

Q ss_pred             ceecccchhhcCCchhHHHhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTR   80 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~   80 (129)
                      .|.|++|...|.....|..|-.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHH
Confidence            4788888888888888877744

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=80.23  E-value=0.76  Score=25.85  Aligned_cols=23  Identities=35%  Similarity=0.608  Sum_probs=11.4

Q ss_pred             cccccchhhccChHHHHHHHhhcCCC
Q psy553           32 HQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ..|-+||+.|..   |.+|...+.+.
T Consensus        22 iiClecGK~fK~---LkRHL~~~hgl   44 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHSM   44 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTCS
T ss_pred             eEecccchhhHH---HHHHHHHccCC
Confidence            445555555553   44555554333

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	129
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-12
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	6e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	7e-12
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-11
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-11
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	4e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-10
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-10
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	3e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-10
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.004
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	7e-10
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	5e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-09
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	9e-08
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-08
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	3e-05
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-08
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	4e-07
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	5e-08
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	1e-07
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-07
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	8e-07
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-04
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	8e-07
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	4e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	9e-06
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	4e-06
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	1e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	1e-05
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	3e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	1e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	3e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	3e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	7e-04
d1a1ia3	28	g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus)	0.002
d2dmda2	26	g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {H	0.004

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.0 bits (133), Expect = 3e-12
 Identities = 18/34 (52%), Positives = 22/34 (64%), Gaps = 1/34 (2%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIR-VHTGEKPYKC 62
          KP+ CQ C K FS    L  HI+ VHT E+P+KC
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.1 bits (97), Expect = 6e-07
 Identities = 11/32 (34%), Positives = 16/32 (50%), Gaps = 1/32 (3%)

Query: 55 TGEKPYKCTYCERRFKQLSHVQQHTRL-HTVE 85
          +  KPY C  C + F +  H+  H +  HT E
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSE 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.8 bits (130), Expect = 7e-12
 Identities = 16/33 (48%), Positives = 22/33 (66%)

Query: 53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          +H+GEKPY C  C + F + S + QH R+HT E
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.3 bits (108), Expect = 1e-08
 Identities = 17/28 (60%), Positives = 21/28 (75%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE 57
          KP+ C +C K+FS +  LVQH RVHTGE
Sbjct: 6  KPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.1 bits (128), Expect = 1e-11
 Identities = 13/34 (38%), Positives = 21/34 (61%)

Query: 52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          R HTGEKPY C++C++ F+Q   +  H + +   
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 1e-06
 Identities = 8/29 (27%), Positives = 12/29 (41%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEK 58
          KP+ C  C K+F     L  H + +    
Sbjct: 7  KPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 52.1 bits (125), Expect = 4e-11
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          +        + YKC  C + F   S + +H R HT E
Sbjct: 2  RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (84), Expect = 4e-05
 Identities = 13/28 (46%), Positives = 19/28 (67%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE 57
          + ++C +C KSFS +  L +H R HTGE
Sbjct: 11 RRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.4 bits (121), Expect = 1e-10
 Identities = 15/35 (42%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 52 RVHTGEKPYKCTYCERRFKQLSHVQQHT-RLHTVE 85
          R H+GEKPY+C  C  RF Q   ++ H  + HT  
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 15/29 (51%), Gaps = 1/29 (3%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHI-RVHTGE 57
          KP++C  C   F+ +  +  HI + HT  
Sbjct: 7  KPYECYICHARFTQSGTMKMHILQKHTEN 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.1 bits (120), Expect = 2e-10
 Identities = 12/35 (34%), Positives = 19/35 (54%)

Query: 50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV 84
            R  TG KP++C  C+R F +  H+  H + H +
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.9 bits (78), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTG 56
          KP QC  C +SFS +  L  H + H  
Sbjct: 10 KPFQCPDCDRSFSRSDHLALHRKRHML 36

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 50.1 bits (119), Expect = 3e-10
 Identities = 20/53 (37%), Positives = 31/53 (58%), Gaps = 1/53 (1%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH 82
          K + CQ C KSF+   Q  +H+ +H G +PY C  C ++FK   H+  H ++H
Sbjct: 2  KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.2 bits (70), Expect = 0.004
 Identities = 9/34 (26%), Positives = 13/34 (38%), Gaps = 1/34 (2%)

Query: 57 EKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSC 90
          +K Y C  C + F   S   +H  +H       C
Sbjct: 1  DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGC 33

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.6 bits (116), Expect = 7e-10
 Identities = 10/35 (28%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 32 HQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCTY 64
            C +  C KSF+    L +H+++H+  + Y C +
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 5e-04
 Identities = 7/28 (25%), Positives = 14/28 (50%), Gaps = 2/28 (7%)

Query: 60 YKCTY--CERRFKQLSHVQQHTRLHTVE 85
          + C    C + F    H+++H +LH+  
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDT 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 47.6 bits (114), Expect = 2e-09
 Identities = 10/29 (34%), Positives = 16/29 (55%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEK 58
          +   C+ C ++F+    L +H R HT EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 43.0 bits (102), Expect = 9e-08
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 58 KPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          + + C  C R F +  H+++H R HT E
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNE 28

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 44.7 bits (106), Expect = 2e-08
 Identities = 8/30 (26%), Positives = 17/30 (56%)

Query: 54 HTGEKPYKCTYCERRFKQLSHVQQHTRLHT 83
           +G++P+ C  C   F   ++  +H ++HT
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHT 31

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.7 bits (85), Expect = 3e-05
 Identities = 9/28 (32%), Positives = 17/28 (60%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGE 57
          +P  C+ CL +F++     +H++VHT  
Sbjct: 6  RPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.6 bits (106), Expect = 2e-08
 Identities = 10/29 (34%), Positives = 15/29 (51%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEK 58
          K   C +C K F  +  L +HI+ H  +K
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 4e-07
 Identities = 8/28 (28%), Positives = 15/28 (53%)

Query: 58 KPYKCTYCERRFKQLSHVQQHTRLHTVE 85
          K + C  C +RF +  H+ +H + H  +
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNK 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.8 bits (104), Expect = 5e-08
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 57 EKPYKCTYCERRFKQLSHVQQHTRLHT 83
          +KP++C  C R F +  H+  H R HT
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.6 bits (101), Expect = 1e-07
 Identities = 14/27 (51%), Positives = 19/27 (70%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHTG 56
          KP QC+ C+++FS +  L  HIR HTG
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.3 bits (100), Expect = 2e-07
 Identities = 13/31 (41%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 30 KPHQC--QQCLKSFSSNHQLVQHIRVHTGEK 58
          +P  C    C K F+ + +L +H R HTGEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 6e-06
 Identities = 12/30 (40%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 58 KPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          +P+ CT+  C +RF +   +Q+H R HT E
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGE 30

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.1 bits (96), Expect = 8e-07
 Identities = 6/41 (14%), Positives = 22/41 (53%), Gaps = 3/41 (7%)

Query: 47 LVQHIRVHTGEKPYKCTYCE--RRFKQLSHVQQHTRLHTVE 85
          + ++++    +K ++C +    + FK+  +++ H + H  +
Sbjct: 7  IDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED 46

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 34.1 bits (78), Expect = 3e-04
 Identities = 7/31 (22%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 30 KPHQCQQCL--KSFSSNHQLVQHIRVHTGEK 58
          K  +C      K+F   + +  HI+ H  ++
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.8 bits (96), Expect = 8e-07
 Identities = 7/31 (22%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 57 EKPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          ++PY C +  C++ F +   + +H + H  +
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.2 bits (84), Expect = 4e-05
 Identities = 10/30 (33%), Positives = 17/30 (56%), Gaps = 2/30 (6%)

Query: 30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTGE 57
          +P+ C    C K+F  NH L++H + H  +
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 1e-06
 Identities = 15/30 (50%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTGE 57
          KPH+C    C KS+S    L  H+R HTGE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.7 bits (88), Expect = 9e-06
 Identities = 12/30 (40%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 58 KPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          KP+KCT+  C + + +L +++ H R HT E
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.7 bits (91), Expect = 4e-06
 Identities = 13/26 (50%), Positives = 19/26 (73%)

Query: 30 KPHQCQQCLKSFSSNHQLVQHIRVHT 55
          KP++C +C K+FS N  L+ H R+HT
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.6 bits (88), Expect = 1e-05
 Identities = 13/26 (50%), Positives = 16/26 (61%)

Query: 58 KPYKCTYCERRFKQLSHVQQHTRLHT 83
          KPYKC  C + F Q S +  H R+HT
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.7 bits (88), Expect = 1e-05
 Identities = 11/28 (39%), Positives = 18/28 (64%), Gaps = 2/28 (7%)

Query: 58 KPYKCTY--CERRFKQLSHVQQHTRLHT 83
          +PY C    C+RRF + + + +H R+HT
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHT 28

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.5 bits (85), Expect = 3e-05
 Identities = 12/29 (41%), Positives = 18/29 (62%), Gaps = 2/29 (6%)

Query: 30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTG 56
          +P+ C    C + FS +  L +HIR+HTG
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 1e-05
 Identities = 14/30 (46%), Positives = 18/30 (60%), Gaps = 2/30 (6%)

Query: 30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTGE 57
          KP QC    C K FS +  L  H+R+HTG+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 3e-05
 Identities = 11/30 (36%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 58 KPYKCTY--CERRFKQLSHVQQHTRLHTVE 85
          KP++CT+  C +RF    +++ H R+HT +
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (85), Expect = 3e-05
 Identities = 8/28 (28%), Positives = 16/28 (57%), Gaps = 2/28 (7%)

Query: 58 KPYKCTY--CERRFKQLSHVQQHTRLHT 83
          +PY C +  C ++F Q ++++ H   H 
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 7e-04
 Identities = 9/28 (32%), Positives = 13/28 (46%), Gaps = 2/28 (7%)

Query: 30 KPHQCQQ--CLKSFSSNHQLVQHIRVHT 55
          +P+ C    C K F+ +  L  HI  H 
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 31.7 bits (72), Expect = 0.002
 Identities = 10/26 (38%), Positives = 17/26 (65%)

Query: 57 EKPYKCTYCERRFKQLSHVQQHTRLH 82
          EKP+ C  C R+F +    ++HT++H
Sbjct: 1  EKPFACDICGRKFARSDERKRHTKIH 26

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 30.8 bits (69), Expect = 0.004
 Identities = 13/26 (50%), Positives = 17/26 (65%)

Query: 31 PHQCQQCLKSFSSNHQLVQHIRVHTG 56
          PH+C+ C K FS   +L  H+R HTG
Sbjct: 1  PHKCEVCGKCFSRKDKLKTHMRCHTG 26

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	129
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.61
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.57
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.31
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.23
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.23
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.17
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.04
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.04
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.0
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.99
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.98
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.97
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.95
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.91
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.88
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.88
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.84
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.84
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.84
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.83
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.81
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.8
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.76
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.76
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.7
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.68
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.66
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.63
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.62
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.56
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.53
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.47
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.4
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.33
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.28
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.25
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.22
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.22
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.2
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.17
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.16
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.06
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.0
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.99
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.86
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.84
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.78
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.72
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.71
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.71
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.67
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.54
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.52
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.47
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.42
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.39
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.32
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.26
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.16
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.13
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.02
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.97
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	96.96
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.9
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.89
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.88
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.82
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.8
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.66
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.51
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.46
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.39
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.38
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.33
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.14
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.94
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.94
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.86
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.82
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.71
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.69
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.64
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	95.57
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.3
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.01
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	95.01
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.43
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.38
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.21
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.15
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.53
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	93.0
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	92.51
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.42
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.3
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	91.12
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.01
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	90.09
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	88.82
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	87.86
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	86.72
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	85.77
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	84.99
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	83.06
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	82.9
d1y0jb1	36	U-shaped transcription factor, different fingers {	81.96
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	81.63
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	80.09

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=2.1e-16  Score=82.06  Aligned_cols=53  Identities=38%  Similarity=0.788  Sum_probs=42.7

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchhhcCCchhHHHhhhhh
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      ++||.| .||+.|.....|..|+++|++++||.|..|++.|.....|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            467888 48888888888888888888888888888888888888888887765

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.57  E-value=9.1e-17  Score=83.47  Aligned_cols=50  Identities=20%  Similarity=0.323  Sum_probs=46.8

Q ss_pred             CCceecccchhhcCCchhHHHhhhhhcCCCccchhhhhhhhhccc-cCcCCC
Q psy553           57 EKPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILSLWIQLD-LKDEPR  107 (129)
Q Consensus        57 ~~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~~  107 (129)
                      ++||.|. |++.|.....|..|+++|+|++||.|.+|++.|.+.+ |..|++
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            5799995 9999999999999999999999999999999999996 888864

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=3.3e-13  Score=64.70  Aligned_cols=35  Identities=34%  Similarity=0.775  Sum_probs=21.5

Q ss_pred             CCceecccchhhcCCchhHHHhhh-hhcCCCccchh
Q psy553           57 EKPYKCTYCERRFKQLSHVQQHTR-LHTVEGVNSCL   91 (129)
Q Consensus        57 ~~~~~C~~c~~~f~~~~~l~~H~~-~h~~~~~y~C~   91 (129)
                      ++||+|..|++.|....+|..|++ +|++++||.|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            456666666666666666666653 56666666664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=8e-13  Score=63.28  Aligned_cols=37  Identities=30%  Similarity=0.552  Sum_probs=32.9

Q ss_pred             HHHhhcCCCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           49 QHIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        49 ~h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      +|+++|++++||.|..|++.|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4788899999999999999999999999999999886

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=2.9e-12  Score=61.31  Aligned_cols=37  Identities=49%  Similarity=0.838  Sum_probs=34.1

Q ss_pred             CCCCcccccchhhccChHHHHHHHh-hcCCCCceeccc
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQHIR-VHTGEKPYKCTY   64 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h~~-~h~~~~~~~C~~   64 (129)
                      .++||.|..||+.|.....|..|++ +|++++||+|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4799999999999999999999976 799999999974

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=6.7e-12  Score=57.83  Aligned_cols=33  Identities=48%  Similarity=0.916  Sum_probs=27.6

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      +|++++||+|..|++.|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            477888888888888888888888888888875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=3.1e-11  Score=57.22  Aligned_cols=35  Identities=34%  Similarity=0.745  Sum_probs=26.5

Q ss_pred             HHhhcCCCCceecccchhhcCCchhHHHhhhhhcC
Q psy553           50 HIRVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        50 h~~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      |.++|++++||+|..|++.|....+|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            56677777888887788888877788877777753

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=5.2e-11  Score=56.05  Aligned_cols=34  Identities=38%  Similarity=0.763  Sum_probs=27.0

Q ss_pred             hhcCCCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           52 RVHTGEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        52 ~~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ++|++++||+|.+|++.|.....|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4678888888888888888888888888887765

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.00  E-value=7.5e-11  Score=52.72  Aligned_cols=29  Identities=34%  Similarity=0.751  Sum_probs=18.1

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcCCC
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      +||.|.+|++.|.....|..|+++|+|||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            35666666666666666666666666654

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.99  E-value=1.2e-10  Score=52.00  Aligned_cols=29  Identities=28%  Similarity=0.693  Sum_probs=20.3

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcCCC
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      +||.|.+|++.|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46677777777777777777777777664

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.98  E-value=4.1e-12  Score=60.36  Aligned_cols=29  Identities=21%  Similarity=0.012  Sum_probs=26.7

Q ss_pred             hhhhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           78 HTRLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        78 H~~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      |.++|+||+||+|.+|++.|.+++ |..|+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~   31 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHR   31 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHH
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHH
Confidence            678999999999999999999996 88885

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=1.9e-10  Score=53.48  Aligned_cols=30  Identities=27%  Similarity=0.721  Sum_probs=16.4

Q ss_pred             CCCCceecccchhhcCCchhHHHhhhhhcC
Q psy553           55 TGEKPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        55 ~~~~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +|++||+|.+|++.|....+|..|+++|++
T Consensus         3 TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           3 SGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             SCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCccccCCCCCCcccChHHHHHHccccCC
Confidence            455555555555555555555555555544

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.1e-10  Score=54.76  Aligned_cols=32  Identities=25%  Similarity=0.622  Sum_probs=24.4

Q ss_pred             eeccc--chhhcCCchhHHHhhhhhcCCCccchh
Q psy553           60 YKCTY--CERRFKQLSHVQQHTRLHTVEGVNSCL   91 (129)
Q Consensus        60 ~~C~~--c~~~f~~~~~l~~H~~~h~~~~~y~C~   91 (129)
                      |.|..  |++.|.....|..|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            56654  778888888888888888888888775

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.91  E-value=2.3e-10  Score=50.56  Aligned_cols=27  Identities=41%  Similarity=0.880  Sum_probs=14.4

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcC
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +||+|.+|++.|.....|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            455555555555555555555555543

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.88  E-value=5.2e-10  Score=49.87  Aligned_cols=29  Identities=34%  Similarity=0.757  Sum_probs=27.4

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEK   58 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (129)
                      +||.|.+|++.|.....|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            68999999999999999999999999874

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=3.2e-10  Score=50.07  Aligned_cols=28  Identities=50%  Similarity=1.051  Sum_probs=26.5

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTG   56 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (129)
                      ++||.|..|++.|..+..|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5899999999999999999999999975

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.84  E-value=2.2e-10  Score=57.00  Aligned_cols=39  Identities=18%  Similarity=0.548  Sum_probs=33.9

Q ss_pred             HHHHHhhcCCCCceeccc--chhhcCCchhHHHhhhhhcCCC
Q psy553           47 LVQHIRVHTGEKPYKCTY--CERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        47 l~~h~~~h~~~~~~~C~~--c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      +..|+ .|.+++||.|.+  |++.|....+|..|+++|+|+|
T Consensus         7 l~~h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           7 IDKYV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hcchh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            44566 489999999977  9999999999999999999985

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=8.5e-10  Score=50.57  Aligned_cols=31  Identities=55%  Similarity=0.872  Sum_probs=29.0

Q ss_pred             CCCCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           27 EANKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        27 ~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ++++||.|..|++.|.....|..|+++|+++
T Consensus         3 Tgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           3 SGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            5689999999999999999999999999874

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.84  E-value=1.2e-09  Score=50.73  Aligned_cols=32  Identities=28%  Similarity=0.730  Sum_probs=29.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      .++++||.|.+|++.|..+..|..|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            46789999999999999999999999999865

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.83  E-value=9.4e-10  Score=48.97  Aligned_cols=29  Identities=34%  Similarity=0.729  Sum_probs=27.3

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCCCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTGEK   58 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (129)
                      +||.|.+|++.|..+..|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            68999999999999999999999999874

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.81  E-value=1e-09  Score=51.47  Aligned_cols=30  Identities=40%  Similarity=0.827  Sum_probs=20.9

Q ss_pred             hcCCCCceecccchhhcCCchhHHHhhhhh
Q psy553           53 VHTGEKPYKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        53 ~h~~~~~~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      +|+|++||+|.+|++.|....+|..|++.+
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~   31 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQK   31 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccc
Confidence            567777777777777777777777776543

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=5.5e-11  Score=55.92  Aligned_cols=27  Identities=22%  Similarity=0.213  Sum_probs=24.5

Q ss_pred             hhhcCCCccchhhhhhhhhccc-cCcCC
Q psy553           80 RLHTVEGVNSCLQILSLWIQLD-LKDEP  106 (129)
Q Consensus        80 ~~h~~~~~y~C~~C~~~f~~~~-l~~h~  106 (129)
                      ++|+||+||.|.+|++.|.+++ |.+|+
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~   28 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHI   28 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHH
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHc
Confidence            4799999999999999999996 88885

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=3.3e-09  Score=50.31  Aligned_cols=32  Identities=41%  Similarity=0.718  Sum_probs=29.5

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ..+++||.|..||+.|.....|..|+++|+|+
T Consensus         7 Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           7 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            45689999999999999999999999999875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.76  E-value=1.3e-09  Score=46.96  Aligned_cols=24  Identities=46%  Similarity=0.924  Sum_probs=13.3

Q ss_pred             ceecccchhhcCCchhHHHhhhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      ||+|.+||+.|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            555555555555555555555554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.70  E-value=2.2e-09  Score=46.24  Aligned_cols=26  Identities=50%  Similarity=0.939  Sum_probs=24.5

Q ss_pred             CCcccccchhhccChHHHHHHHhhcC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHT   55 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~   55 (129)
                      +||.|.+||+.|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999884

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=3.3e-09  Score=49.57  Aligned_cols=32  Identities=31%  Similarity=0.801  Sum_probs=29.9

Q ss_pred             ccccc--chhhccChHHHHHHHhhcCCCCceecc
Q psy553           32 HQCQQ--CLKSFSSNHQLVQHIRVHTGEKPYKCT   63 (129)
Q Consensus        32 ~~C~~--C~~~f~~~~~l~~h~~~h~~~~~~~C~   63 (129)
                      |.|..  |++.|..+..|..|+++|++++||.|.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            67876  999999999999999999999999996

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.66  E-value=8.7e-09  Score=48.18  Aligned_cols=32  Identities=25%  Similarity=0.472  Sum_probs=29.3

Q ss_pred             CCCCCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           26 LEANKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        26 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      .++++||.|.+|++.|.....|..|+++|.++
T Consensus         3 HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           3 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             CCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            45789999999999999999999999999865

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=6.4e-09  Score=46.48  Aligned_cols=27  Identities=41%  Similarity=0.908  Sum_probs=15.1

Q ss_pred             ceeccc--chhhcCCchhHHHhhhhhcCC
Q psy553           59 PYKCTY--CERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        59 ~~~C~~--c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ||.|.+  |++.|.....|..|+++|+||
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            555544  555555555555555555553

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=6.9e-09  Score=46.43  Aligned_cols=28  Identities=39%  Similarity=0.942  Sum_probs=17.7

Q ss_pred             Cceeccc--chhhcCCchhHHHhhhhhcCC
Q psy553           58 KPYKCTY--CERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        58 ~~~~C~~--c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      +||.|.+  |++.|.....|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            3566654  666666666666666666654

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.4e-08  Score=45.70  Aligned_cols=29  Identities=45%  Similarity=0.970  Sum_probs=17.6

Q ss_pred             Cceecc--cchhhcCCchhHHHhhhhhcCCC
Q psy553           58 KPYKCT--YCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        58 ~~~~C~--~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      +||.|+  .|++.|....+|..|+++|+|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            356664  36666666666666666666654

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=2.5e-08  Score=44.46  Aligned_cols=28  Identities=54%  Similarity=0.959  Sum_probs=26.2

Q ss_pred             CCccccc--chhhccChHHHHHHHhhcCCC
Q psy553           30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        30 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      +||.|.+  |++.|.....|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            6899988  999999999999999999975

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=2.8e-08  Score=44.38  Aligned_cols=28  Identities=50%  Similarity=0.940  Sum_probs=25.9

Q ss_pred             CCccccc--chhhccChHHHHHHHhhcCCC
Q psy553           30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        30 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      +||.|.+  |++.|.....|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899987  999999999999999999875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=8.6e-08  Score=43.08  Aligned_cols=29  Identities=45%  Similarity=0.860  Sum_probs=26.3

Q ss_pred             CCcccc--cchhhccChHHHHHHHhhcCCCC
Q psy553           30 KPHQCQ--QCLKSFSSNHQLVQHIRVHTGEK   58 (129)
Q Consensus        30 ~~~~C~--~C~~~f~~~~~l~~h~~~h~~~~   58 (129)
                      +||.|+  .|++.|.....|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            589996  49999999999999999999874

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.33  E-value=8.5e-08  Score=42.33  Aligned_cols=27  Identities=41%  Similarity=1.002  Sum_probs=16.3

Q ss_pred             Cceeccc--chhhcCCchhHHHhhhhhcC
Q psy553           58 KPYKCTY--CERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        58 ~~~~C~~--c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +||.|.+  |++.|.....|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            3566654  66666666666666666654

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.28  E-value=2.6e-07  Score=41.66  Aligned_cols=27  Identities=26%  Similarity=0.741  Sum_probs=14.5

Q ss_pred             Cceeccc--chhhcCCchhHHHhhhhhcC
Q psy553           58 KPYKCTY--CERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        58 ~~~~C~~--c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +||.|.+  |++.|....+|..|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            4555544  55555555555555555543

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.25  E-value=7.4e-08  Score=47.55  Aligned_cols=33  Identities=24%  Similarity=0.529  Sum_probs=29.7

Q ss_pred             CCCCCCccccc--chhhccChHHHHHHHhhcCCCC
Q psy553           26 LEANKPHQCQQ--CLKSFSSNHQLVQHIRVHTGEK   58 (129)
Q Consensus        26 ~~~~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~~   58 (129)
                      ..+++||.|.+  |++.|.....|..|+++|++++
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            35679999987  9999999999999999999874

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.22  E-value=3.8e-07  Score=40.13  Aligned_cols=30  Identities=23%  Similarity=0.510  Sum_probs=20.2

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcCCCcc
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTVEGVN   88 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y   88 (129)
                      ...|.+||+.|...-.|.+|...|++|+||
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            345666666666666677776667777766

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.22  E-value=4.3e-07  Score=40.95  Aligned_cols=29  Identities=34%  Similarity=0.839  Sum_probs=26.4

Q ss_pred             CCCccccc--chhhccChHHHHHHHhhcCCC
Q psy553           29 NKPHQCQQ--CLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        29 ~~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ++||.|.+  |++.|.....|..|+++|...
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            58999988  999999999999999999753

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=1.9e-07  Score=41.16  Aligned_cols=27  Identities=44%  Similarity=0.939  Sum_probs=24.9

Q ss_pred             CCccccc--chhhccChHHHHHHHhhcCC
Q psy553           30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTG   56 (129)
Q Consensus        30 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~   56 (129)
                      +||.|.+  |++.|.....|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899987  99999999999999999975

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=3e-07  Score=40.10  Aligned_cols=26  Identities=31%  Similarity=0.933  Sum_probs=16.8

Q ss_pred             Cceeccc--chhhcCCchhHHHhhhhhc
Q psy553           58 KPYKCTY--CERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        58 ~~~~C~~--c~~~f~~~~~l~~H~~~h~   83 (129)
                      +||.|..  |++.|....+|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            3566655  6666666666666666663

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=6.1e-07  Score=36.80  Aligned_cols=26  Identities=50%  Similarity=1.018  Sum_probs=18.7

Q ss_pred             CcccccchhhccChHHHHHHHhhcCC
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHTG   56 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (129)
                      |++|..|++.|..+..|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46677777777777777777777654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.5e-06  Score=37.34  Aligned_cols=29  Identities=31%  Similarity=0.685  Sum_probs=24.4

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ++||.|+.|+..|+.+..+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47888999998999888888888888764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=5.8e-07  Score=39.17  Aligned_cols=26  Identities=35%  Similarity=0.687  Sum_probs=23.9

Q ss_pred             CCccccc--chhhccChHHHHHHHhhcC
Q psy553           30 KPHQCQQ--CLKSFSSNHQLVQHIRVHT   55 (129)
Q Consensus        30 ~~~~C~~--C~~~f~~~~~l~~h~~~h~   55 (129)
                      +||.|.+  |++.|.....|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899988  9999999999999999885

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2.1e-06  Score=37.66  Aligned_cols=32  Identities=41%  Similarity=0.680  Sum_probs=29.7

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCce
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPY   60 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~   60 (129)
                      .+...|..||+.|.....|.+|.-+|.+++||
T Consensus         3 rk~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           3 RKQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CCSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             chhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            46788999999999999999999999999997

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.86  E-value=4.3e-06  Score=35.32  Aligned_cols=25  Identities=36%  Similarity=0.963  Sum_probs=14.9

Q ss_pred             CceecccchhhcCCchhHHHhhhhh
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      +||.|.+|++.|..+....+|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4566666666666666555555555

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=4.4e-06  Score=34.17  Aligned_cols=26  Identities=35%  Similarity=0.703  Sum_probs=18.9

Q ss_pred             ceecccchhhcCCchhHHHhhhhhcC
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      |.+|.+|++-|.....|..|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777777764

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.78  E-value=7.3e-06  Score=34.59  Aligned_cols=27  Identities=26%  Similarity=0.694  Sum_probs=24.8

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHT   55 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~   55 (129)
                      ++||.|..||+.|.......+|..+|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            589999999999999999999998875

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1e-05  Score=33.90  Aligned_cols=27  Identities=33%  Similarity=0.651  Sum_probs=13.6

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcC
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +||+|.+|...-..++.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            345555555444445555555555544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.71  E-value=4.6e-07  Score=42.07  Aligned_cols=23  Identities=13%  Similarity=0.049  Sum_probs=18.4

Q ss_pred             cCCCccchhhhhhhhhccc-cCcC
Q psy553           83 TVEGVNSCLQILSLWIQLD-LKDE  105 (129)
Q Consensus        83 ~~~~~y~C~~C~~~f~~~~-l~~h  105 (129)
                      +|.+||.|..|+|.|.|+| +.+|
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH   24 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRH   24 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHh
Confidence            4678899999999998886 6655

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.71  E-value=1.3e-05  Score=36.78  Aligned_cols=30  Identities=27%  Similarity=0.592  Sum_probs=24.5

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEK   58 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~   58 (129)
                      .+.|.|..|++.|.+.++|..||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            466889999999999999999988887553

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.3e-05  Score=33.58  Aligned_cols=29  Identities=38%  Similarity=0.772  Sum_probs=26.2

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCC
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      ++||+|..|.......+.|..|.+.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            47999999999999999999999999874

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=2.7e-05  Score=32.42  Aligned_cols=25  Identities=44%  Similarity=0.820  Sum_probs=13.3

Q ss_pred             cccccchhhccChHHHHHHHhhcCC
Q psy553           32 HQCQQCLKSFSSNHQLVQHIRVHTG   56 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h~~   56 (129)
                      +.|.+||+.|...+.|.+|+-+|++
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            3455555555555555555555544

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.52  E-value=2.8e-05  Score=31.41  Aligned_cols=24  Identities=38%  Similarity=0.711  Sum_probs=17.2

Q ss_pred             cccccchhhccChHHHHHHHhhcC
Q psy553           32 HQCQQCLKSFSSNHQLVQHIRVHT   55 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h~   55 (129)
                      |+|..|.+.|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            467777777777777777777664

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.47  E-value=3.2e-05  Score=33.07  Aligned_cols=29  Identities=41%  Similarity=0.785  Sum_probs=22.9

Q ss_pred             CCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           57 EKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        57 ~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ++||.|++|...|.....+..|.+.|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            46888888888888888888888877654

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.42  E-value=4.9e-05  Score=31.60  Aligned_cols=26  Identities=31%  Similarity=0.580  Sum_probs=23.3

Q ss_pred             eecccchhhcCCchhHHHhhhhhcCC
Q psy553           60 YKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ..|..||+.|.-++.|.+|+..|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            57889999999999999999999885

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=7.2e-05  Score=31.39  Aligned_cols=26  Identities=31%  Similarity=0.470  Sum_probs=16.8

Q ss_pred             cccccchhhccChHHHHHHHhhcCCC
Q psy553           32 HQCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      |.|..|+.....++.|.+|+++|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            55666666666666666666666654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=6.6e-05  Score=31.50  Aligned_cols=27  Identities=37%  Similarity=0.552  Sum_probs=24.5

Q ss_pred             eecccchhhcCCchhHHHhhhhhcCCC
Q psy553           60 YKCTYCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      |.|..|+....-++-|+.|.+.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            679999999999999999999999875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=9.2e-05  Score=30.64  Aligned_cols=26  Identities=31%  Similarity=0.733  Sum_probs=18.6

Q ss_pred             CCcccccchhhccChHHHHHHHhhcC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHT   55 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~   55 (129)
                      +||+|..|.......+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57777777777777777777777664

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.16  E-value=0.00012  Score=30.66  Aligned_cols=25  Identities=28%  Similarity=0.659  Sum_probs=20.6

Q ss_pred             CcccccchhhccChHHHHHHHhhcC
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHT   55 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~   55 (129)
                      ||.|..|...|+.+.+|..||.+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSKa   25 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSKA   25 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSSS
T ss_pred             CcccceeeeeEeeccchhHhhhhhh
Confidence            6788889888999999998887643

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.13  E-value=0.00015  Score=30.90  Aligned_cols=23  Identities=26%  Similarity=0.725  Sum_probs=12.0

Q ss_pred             Cccccc--chhhccChHHHHHHHhh
Q psy553           31 PHQCQQ--CLKSFSSNHQLVQHIRV   53 (129)
Q Consensus        31 ~~~C~~--C~~~f~~~~~l~~h~~~   53 (129)
                      ||.|..  |++.+...+.|.+|+..
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~   26 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKT   26 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHH
T ss_pred             CeecccCCCCcccCCHHHHHHHHHh
Confidence            455544  44555555555555543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=0.00018  Score=30.64  Aligned_cols=27  Identities=30%  Similarity=0.737  Sum_probs=21.5

Q ss_pred             Cceeccc--chhhcCCchhHHHhhhhhcC
Q psy553           58 KPYKCTY--CERRFKQLSHVQQHTRLHTV   84 (129)
Q Consensus        58 ~~~~C~~--c~~~f~~~~~l~~H~~~h~~   84 (129)
                      +||.|.+  |.+++...++|..|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788865  88889999999999886543

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.97  E-value=0.0003  Score=29.40  Aligned_cols=27  Identities=30%  Similarity=0.626  Sum_probs=17.3

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTG   56 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (129)
                      ..|.|..|...|...-.|..||.+|+|
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccC
Confidence            346666666666666666666666655

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=96.96  E-value=0.0002  Score=28.79  Aligned_cols=23  Identities=48%  Similarity=1.003  Sum_probs=20.4

Q ss_pred             eecccchhhcCCchhHHHhhhhh
Q psy553           60 YKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      |+|.+|.++|.-.+.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            57889999999999999999877

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.90  E-value=0.00027  Score=29.16  Aligned_cols=26  Identities=38%  Similarity=0.834  Sum_probs=23.0

Q ss_pred             CceecccchhhcCCchhHHHhhhhhc
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      +|++|..|...-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999988889999999999885

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.0003  Score=32.37  Aligned_cols=24  Identities=29%  Similarity=0.621  Sum_probs=17.7

Q ss_pred             CCCcccccchhhccChHHHHHHHh
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIR   52 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~   52 (129)
                      -+||.|..|++.|.+...+.+|..
T Consensus         3 iKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           3 IKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCceeccchhhhhhhHHHHHHhhh
Confidence            477777777777777777777754

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.88  E-value=0.00035  Score=31.83  Aligned_cols=29  Identities=24%  Similarity=0.779  Sum_probs=24.8

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcCCC
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      +.|+|.+|++.|.+.+.|=-|++.|..++
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CccCCCCCCCccCCcccccchHhhhcchH
Confidence            56899999999999999999999886554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.82  E-value=0.00044  Score=28.21  Aligned_cols=25  Identities=48%  Similarity=0.741  Sum_probs=15.8

Q ss_pred             ccccchhhccChHHHHHHHhhcCCC
Q psy553           33 QCQQCLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        33 ~C~~C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      .|+.|.+.|.++.-|..|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4666666666666666666666654

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.80  E-value=0.00037  Score=28.43  Aligned_cols=26  Identities=31%  Similarity=0.586  Sum_probs=23.8

Q ss_pred             ecccchhhcCCchhHHHhhhhhcCCC
Q psy553           61 KCTYCERRFKQLSHVQQHTRLHTVEG   86 (129)
Q Consensus        61 ~C~~c~~~f~~~~~l~~H~~~h~~~~   86 (129)
                      +|+.|.+.|.+.-.|..|-+.|+||+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68899999999999999999999985

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.66  E-value=0.00058  Score=28.60  Aligned_cols=27  Identities=41%  Similarity=0.876  Sum_probs=15.7

Q ss_pred             ceeccc--chhhcCCchhHHHhhhhhcCC
Q psy553           59 PYKCTY--CERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        59 ~~~C~~--c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ||.|..  |.+.|.....|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            455532  666666666666666666553

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.51  E-value=0.0011  Score=27.66  Aligned_cols=29  Identities=28%  Similarity=0.617  Sum_probs=25.8

Q ss_pred             CCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           57 EKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        57 ~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      +..|-|.+|...|...-.|..||..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34689999999999999999999999885

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.46  E-value=0.00085  Score=27.95  Aligned_cols=24  Identities=38%  Similarity=1.038  Sum_probs=11.6

Q ss_pred             ceeccc--chhhcCCchhHHHhhhhh
Q psy553           59 PYKCTY--CERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        59 ~~~C~~--c~~~f~~~~~l~~H~~~h   82 (129)
                      ||+|+.  |++.|...+.|.+|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            444432  555555555555554443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.39  E-value=0.00064  Score=28.46  Aligned_cols=28  Identities=50%  Similarity=0.935  Sum_probs=24.0

Q ss_pred             CCccccc--chhhccChHHHHHHHhhcCCC
Q psy553           30 KPHQCQQ--CLKSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        30 ~~~~C~~--C~~~f~~~~~l~~h~~~h~~~   57 (129)
                      +||.|..  |.+.|.+...|.+|.-+|+++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            5788876  889999999999998888763

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00085  Score=28.73  Aligned_cols=27  Identities=37%  Similarity=0.782  Sum_probs=17.4

Q ss_pred             Cceeccc--chhhcCCchhHHHhh-hhhcC
Q psy553           58 KPYKCTY--CERRFKQLSHVQQHT-RLHTV   84 (129)
Q Consensus        58 ~~~~C~~--c~~~f~~~~~l~~H~-~~h~~   84 (129)
                      +||.|..  |.+.|...+.-.+|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4666654  667777776666775 66654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.33  E-value=0.00094  Score=27.80  Aligned_cols=25  Identities=40%  Similarity=0.729  Sum_probs=21.1

Q ss_pred             CCccccc--chhhccChHHHHHHHhhc
Q psy553           30 KPHQCQQ--CLKSFSSNHQLVQHIRVH   54 (129)
Q Consensus        30 ~~~~C~~--C~~~f~~~~~l~~h~~~h   54 (129)
                      -||.|+.  |++.|...+.|.+|..+|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4788977  889999999999997765

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.14  E-value=0.0015  Score=27.96  Aligned_cols=22  Identities=27%  Similarity=0.744  Sum_probs=12.9

Q ss_pred             CcccccchhhccChHHHHHHHh
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIR   52 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~   52 (129)
                      ||.|.+|++.|..+..|.+|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            4556666666666666655543

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.94  E-value=0.0022  Score=26.79  Aligned_cols=22  Identities=41%  Similarity=0.913  Sum_probs=11.4

Q ss_pred             ceecccchhhcCCchhHHHhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTR   80 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~   80 (129)
                      ||+|..|..-..+.++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            4555555544445555555544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.94  E-value=0.0018  Score=25.89  Aligned_cols=22  Identities=27%  Similarity=0.709  Sum_probs=14.9

Q ss_pred             CcccccchhhccChHHHHHHHh
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIR   52 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~   52 (129)
                      ||+|..|...|..+..|+.||-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            5667777777777777766653

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.86  E-value=0.0022  Score=27.38  Aligned_cols=22  Identities=32%  Similarity=0.851  Sum_probs=12.8

Q ss_pred             ceecccchhhcCCchhHHHhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTR   80 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~   80 (129)
                      ||.|.+|++.|.....|.+|+.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            4556666666666665555543

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.0035  Score=26.23  Aligned_cols=23  Identities=35%  Similarity=0.788  Sum_probs=12.9

Q ss_pred             ceecccchhhcCCchhHHHhhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRL   81 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~   81 (129)
                      ||+|..|......+++|..|.++
T Consensus         2 py~cqyc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhhc
Confidence            55555555555555555555554

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.71  E-value=0.0027  Score=25.37  Aligned_cols=23  Identities=39%  Similarity=0.831  Sum_probs=17.5

Q ss_pred             CceecccchhhcCCchhHHHhhh
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTR   80 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~   80 (129)
                      .||+|..|...|.+...|+.|+-
T Consensus         1 mpykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHH
Confidence            36788888888888888877764

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.0031  Score=26.33  Aligned_cols=27  Identities=22%  Similarity=0.577  Sum_probs=22.7

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTG   56 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (129)
                      +||+|..|..-.+..++|..|+....+
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            589999999888999999999875433

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.64  E-value=0.0039  Score=28.11  Aligned_cols=26  Identities=31%  Similarity=0.696  Sum_probs=13.6

Q ss_pred             CCCccccc--chhhccChHHHHHHHhhc
Q psy553           29 NKPHQCQQ--CLKSFSSNHQLVQHIRVH   54 (129)
Q Consensus        29 ~~~~~C~~--C~~~f~~~~~l~~h~~~h   54 (129)
                      ++||.|..  |++.|.....|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            45555532  555555555555554443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.57  E-value=0.0049  Score=25.74  Aligned_cols=26  Identities=31%  Similarity=0.475  Sum_probs=22.7

Q ss_pred             CCcccccchhhccChHHHHHHHhhcC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHT   55 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~   55 (129)
                      +||.|..|.......++|..|..+..
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            58999999999999999999987643

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.30  E-value=0.0058  Score=27.51  Aligned_cols=28  Identities=36%  Similarity=0.781  Sum_probs=22.4

Q ss_pred             CCCceecc--cchhhcCCchhHHHhhhhhc
Q psy553           56 GEKPYKCT--YCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        56 ~~~~~~C~--~c~~~f~~~~~l~~H~~~h~   83 (129)
                      .++||.|.  .|+.+|.....|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            36889994  48899999999988887663

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.01  E-value=0.0065  Score=24.79  Aligned_cols=21  Identities=29%  Similarity=0.749  Sum_probs=13.7

Q ss_pred             CcccccchhhccChHHHHHHH
Q psy553           31 PHQCQQCLKSFSSNHQLVQHI   51 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~   51 (129)
                      ||.|..||+.+..+.+|..|.
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            466666776666666666664

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.0058  Score=25.39  Aligned_cols=23  Identities=39%  Similarity=0.953  Sum_probs=15.4

Q ss_pred             ceecccchhhcCCchhHHHhhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRL   81 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~   81 (129)
                      ||.|..|...|....+|-.||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            46666677777777777776653

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.43  E-value=0.0082  Score=26.37  Aligned_cols=19  Identities=47%  Similarity=0.782  Sum_probs=14.3

Q ss_pred             hhccChHHHHHHHhhcCCC
Q psy553           39 KSFSSNHQLVQHIRVHTGE   57 (129)
Q Consensus        39 ~~f~~~~~l~~h~~~h~~~   57 (129)
                      +.|.....|..|+++|+++
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4577788888888888764

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.38  E-value=0.012  Score=23.51  Aligned_cols=22  Identities=23%  Similarity=0.771  Sum_probs=18.5

Q ss_pred             cccccchhhccChHHHHHHHhh
Q psy553           32 HQCQQCLKSFSSNHQLVQHIRV   53 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~   53 (129)
                      |.|+.|.+.|..+.++..|...
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6899999999999998888653

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.015  Score=23.80  Aligned_cols=24  Identities=29%  Similarity=0.648  Sum_probs=14.1

Q ss_pred             ceecccchhhcCCchhHHHhhhhh
Q psy553           59 PYKCTYCERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        59 ~~~C~~c~~~f~~~~~l~~H~~~h   82 (129)
                      |-+|..|..+......|..|.++|
T Consensus         2 pekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGG
T ss_pred             CccCcccccccCcHHHHHHhhccc
Confidence            345666666666666666666555

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.15  E-value=0.021  Score=23.39  Aligned_cols=25  Identities=40%  Similarity=0.700  Sum_probs=22.0

Q ss_pred             CcccccchhhccChHHHHHHHhhcC
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHT   55 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~   55 (129)
                      |-+|+.|..+...+..|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4579999999999999999998874

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.53  E-value=0.019  Score=27.08  Aligned_cols=27  Identities=30%  Similarity=0.388  Sum_probs=22.2

Q ss_pred             CCcccccchhhccChHHHHHHHhhcCC
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIRVHTG   56 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (129)
                      ..+.|..|++.|.....|..|...|.-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcCc
Confidence            457899999999999999888877753

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.00  E-value=0.022  Score=24.91  Aligned_cols=19  Identities=42%  Similarity=0.431  Sum_probs=16.6

Q ss_pred             hhcCCchhHHHhhhhhcCC
Q psy553           67 RRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        67 ~~f~~~~~l~~H~~~h~~~   85 (129)
                      +.|.....|..|++.|+||
T Consensus        15 ~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHCC
T ss_pred             CcchhHHHHHHHHhhcCCC
Confidence            4688889999999999986

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.51  E-value=0.041  Score=23.87  Aligned_cols=26  Identities=23%  Similarity=0.597  Sum_probs=21.0

Q ss_pred             CcccccchhhccChHHHHHHHhhcCC
Q psy553           31 PHQCQQCLKSFSSNHQLVQHIRVHTG   56 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (129)
                      .|.|..|++.|.....+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47888899999888888888776665

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.42  E-value=0.017  Score=26.14  Aligned_cols=25  Identities=24%  Similarity=0.369  Sum_probs=16.1

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcCCCccchhhhhh
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQILS   95 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~~   95 (129)
                      +.|.|.+||..             +.|+-|..|++|+.
T Consensus         4 ~~~~C~vCG~i-------------~~g~~P~~CPvCg~   28 (37)
T d1nnqa2           4 KVYICPICGYT-------------AVDEAPEYCPVCGA   28 (37)
T ss_dssp             CEEECTTTCCE-------------EESCCCSBCTTTCC
T ss_pred             cEEECCCCCCE-------------ecCCCCCcCCCCCC
Confidence            45777777753             33456677888763

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.30  E-value=0.029  Score=25.13  Aligned_cols=24  Identities=25%  Similarity=0.394  Sum_probs=14.8

Q ss_pred             CceecccchhhcCCchhHHHhhhhhcCCCccchhhhh
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHTVEGVNSCLQIL   94 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~~~~~y~C~~C~   94 (129)
                      +.|.|.+||..             +.|+-|-+|++|+
T Consensus         4 ~~~vC~vCGyi-------------~~g~~Pe~CPvCg   27 (36)
T d1yuza2           4 KFHLCPICGYI-------------HKGEDFEKCPICF   27 (36)
T ss_dssp             CEEECSSSCCE-------------EESSCCSBCTTTC
T ss_pred             CEEECCCCCCE-------------eeCCCCCcCCCCC
Confidence            45677777752             3345566677776

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.12  E-value=0.048  Score=25.66  Aligned_cols=26  Identities=23%  Similarity=0.519  Sum_probs=22.7

Q ss_pred             CceecccchhhcCCchhHHHhhhhhc
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRLHT   83 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~h~   83 (129)
                      ..+.|-.|++.|.....|.+|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            45789999999999999999988774

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.01  E-value=0.057  Score=27.67  Aligned_cols=25  Identities=28%  Similarity=0.604  Sum_probs=18.7

Q ss_pred             CCCcccccchhhccChHHHHHHHhh
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRV   53 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~   53 (129)
                      ...|.|..|++.|.+...|..|.++
T Consensus        13 ~gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          13 GGLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCEEecccccCccCCHHHHHHHHcc
Confidence            4557888888888888888777653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.09  E-value=0.089  Score=21.35  Aligned_cols=22  Identities=23%  Similarity=0.525  Sum_probs=14.6

Q ss_pred             cccccchhhccChHHHHHHHhh
Q psy553           32 HQCQQCLKSFSSNHQLVQHIRV   53 (129)
Q Consensus        32 ~~C~~C~~~f~~~~~l~~h~~~   53 (129)
                      |.|+.|+.....++.|..|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5677777666666766666653

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.82  E-value=0.24  Score=20.31  Aligned_cols=21  Identities=24%  Similarity=0.471  Sum_probs=16.4

Q ss_pred             CcccccchhhccChHHHHHHH
Q psy553           31 PHQCQQCLKSFSSNHQLVQHI   51 (129)
Q Consensus        31 ~~~C~~C~~~f~~~~~l~~h~   51 (129)
                      .|.|..||+..++...+..|.
T Consensus         2 ~ftc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHH
T ss_pred             ceechhHHHHHhhccCceEEE
Confidence            477888888888887777774

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.86  E-value=0.24  Score=23.11  Aligned_cols=23  Identities=22%  Similarity=0.634  Sum_probs=10.7

Q ss_pred             CCcccccchhhccChHHHHHHHh
Q psy553           30 KPHQCQQCLKSFSSNHQLVQHIR   52 (129)
Q Consensus        30 ~~~~C~~C~~~f~~~~~l~~h~~   52 (129)
                      .|-.|+.|+.......+|.+|..
T Consensus        23 qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHH
Confidence            34445555544444444444433

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=86.72  E-value=0.14  Score=20.55  Aligned_cols=18  Identities=39%  Similarity=0.564  Sum_probs=11.8

Q ss_pred             chhhccChHHHHHHHhhc
Q psy553           37 CLKSFSSNHQLVQHIRVH   54 (129)
Q Consensus        37 C~~~f~~~~~l~~h~~~h   54 (129)
                      |++.|+....|..|+.+|
T Consensus         9 c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeecc
Confidence            666676666666666555

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.77  E-value=0.24  Score=20.10  Aligned_cols=18  Identities=28%  Similarity=0.667  Sum_probs=11.1

Q ss_pred             chhhcCCchhHHHhhhhh
Q psy553           65 CERRFKQLSHVQQHTRLH   82 (129)
Q Consensus        65 c~~~f~~~~~l~~H~~~h   82 (129)
                      |.+.|...+...+|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            556666666666666555

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.99  E-value=0.13  Score=26.21  Aligned_cols=24  Identities=25%  Similarity=0.495  Sum_probs=20.9

Q ss_pred             CceecccchhhcCCchhHHHhhhh
Q psy553           58 KPYKCTYCERRFKQLSHVQQHTRL   81 (129)
Q Consensus        58 ~~~~C~~c~~~f~~~~~l~~H~~~   81 (129)
                      ..|-|..|.+.|.+...|..|+++
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CEEecccccCccCCHHHHHHHHcc
Confidence            348899999999999999999874

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.06  E-value=0.55  Score=23.47  Aligned_cols=29  Identities=28%  Similarity=0.622  Sum_probs=23.3

Q ss_pred             CCCCcccccchhhccChHHHHHHHhhcCC
Q psy553           28 ANKPHQCQQCLKSFSSNHQLVQHIRVHTG   56 (129)
Q Consensus        28 ~~~~~~C~~C~~~f~~~~~l~~h~~~h~~   56 (129)
                      ....|.|..|...|.....|..|...|..
T Consensus        15 ~s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          15 QNSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CCSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CCceeeechhHHHHhhHHHHHHHHHhccH
Confidence            34668999999888888888888887754

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=82.90  E-value=0.22  Score=21.53  Aligned_cols=25  Identities=12%  Similarity=0.460  Sum_probs=19.2

Q ss_pred             CCCcccccchhhccChHHHHHHHhh
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRV   53 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~   53 (129)
                      +..|.|..|.+.+...+++-+|-.+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHh
Confidence            4568888888888888888777543

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=81.96  E-value=0.45  Score=20.22  Aligned_cols=21  Identities=24%  Similarity=0.542  Sum_probs=10.0

Q ss_pred             eecccchhhcCCchhHHHhhh
Q psy553           60 YKCTYCERRFKQLSHVQQHTR   80 (129)
Q Consensus        60 ~~C~~c~~~f~~~~~l~~H~~   80 (129)
                      |.|.-||-.|.+.+.|..|+.
T Consensus         9 f~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           9 FMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CBCTTTCCBCSCHHHHHHHTT
T ss_pred             eeccccceeecChhHHHhhhh
Confidence            444444444555444444443

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.63  E-value=1.6  Score=20.21  Aligned_cols=30  Identities=23%  Similarity=0.531  Sum_probs=24.9

Q ss_pred             CCCceecccchhhcCCchhHHHhhhhhcCC
Q psy553           56 GEKPYKCTYCERRFKQLSHVQQHTRLHTVE   85 (129)
Q Consensus        56 ~~~~~~C~~c~~~f~~~~~l~~H~~~h~~~   85 (129)
                      ++.|..|++|+-...++.+|.+|+...+=.
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~   50 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSC
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhc
Confidence            457899999999999999999998765433

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.09  E-value=0.43  Score=23.84  Aligned_cols=36  Identities=17%  Similarity=0.525  Sum_probs=21.1

Q ss_pred             CCCcccccchhhccChHHHHHHHhhcCCCCceecccchh
Q psy553           29 NKPHQCQQCLKSFSSNHQLVQHIRVHTGEKPYKCTYCER   67 (129)
Q Consensus        29 ~~~~~C~~C~~~f~~~~~l~~h~~~h~~~~~~~C~~c~~   67 (129)
                      ..-|.|+.|++.|.....+.   -.......|.|..|+.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCC
T ss_pred             CCceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCC
Confidence            34578888888776544332   2333344577777764