Psyllid ID: psy5624

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-----
Protein Sequence
MSSFSSSSPCASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK
Secondary Structure (PSIPRED)
ccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcHHHHHHHccccccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccccHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHccccccccccHHHHHHHHcccccccHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHccc
Coil and Loop (DISEMBL)
mssfsssspcastAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALpkaesfanskyykggfepkmtKREASLILGVSQSANRMKIKEAHKRIITlnhpdrggspylAAKINEAKDLLEQSK
Flexible Loop (DISEMBL)
mssfsssspcASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREASLILGVSQSANRMKIKEAHKRIItlnhpdrggspylaAKINEAKDLLEQSK
Low Complexity Region (SEG)
MssfssssPCASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK
Disordered region (IsUnstruct)
***********STAILTGLGLAAVGYAGRYILKAAPMASARLNEAL*************YYK*************LIL****************RIIT***************************
Disordered Region (DISOPRED)
*********CASTAILTGLGLAAVGYAGRYILKAAPMASAR******************************REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE***
Disordered Region (DISEMBL)
***********STAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK
Disordered Region (DISPRO)
*****SSSPCASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQ**
Transmembrane Helix (TMHMM)
oooooooooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
ooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MSSFSSSSPCASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	125	2.2.26 [Sep-21-2011]
Q9VTJ8	118	Mitochondrial import inne	yes	N/A	0.928	0.983	0.669	2e-40
Q5RF34	116	Mitochondrial import inne	yes	N/A	0.888	0.956	0.601	3e-34
Q96DA6	116	Mitochondrial import inne	yes	N/A	0.888	0.956	0.601	3e-34
Q3ZBN8	116	Mitochondrial import inne	yes	N/A	0.88	0.948	0.607	1e-33
Q6PBT7	115	Mitochondrial import inne	yes	N/A	0.872	0.947	0.589	6e-32
Q9CQV7	116	Mitochondrial import inne	yes	N/A	0.88	0.948	0.607	1e-29
P91454	112	Mitochondrial import inne	yes	N/A	0.848	0.946	0.576	6e-29
Q78YY6	149	DnaJ homolog subfamily C	no	N/A	0.808	0.677	0.594	2e-28
Q9Y5T4	150	DnaJ homolog subfamily C	no	N/A	0.856	0.713	0.563	1e-27
Q617M0	111	Mitochondrial import inne	N/A	N/A	0.84	0.945	0.540	1e-27

>sp|Q9VTJ8|TIM14_DROME Mitochondrial import inner membrane translocase subunit TIM14 OS=Drosophila melanogaster GN=Tim14 PE=3 SV=2

 Score =  164 bits (414), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 79/118 (66%), Positives = 99/118 (83%), Gaps = 2/118 (1%)

Query: 10  CASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGGFEP 67
            AS+ IL GL +AAVG+AG+++++  P  + + NEALK LPK  AES A SKYYKGGF+P
Sbjct: 1   MASSVILAGLSVAAVGFAGKHLMRRMPQMTTKFNEALKNLPKYDAESMAASKYYKGGFDP 60

Query: 68  KMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
           KM KREASLILGVS SA+++KIK+AHK+I+ LNHPDRGGSPYLAAKINEAKD L+++K
Sbjct: 61  KMNKREASLILGVSPSASKIKIKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFLDKAK 118

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.
Drosophila melanogaster (taxid: 7227)

>sp|Q5RF34|TIM14_PONAB Mitochondrial import inner membrane translocase subunit TIM14 OS=Pongo abelii GN=DNAJC19 PE=3 SV=3

 Score =  143 bits (361), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/113 (60%), Positives = 91/113 (80%), Gaps = 2/113 (1%)

Query: 10  CASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKM 69
            AST +  GL +AA G+AGRY+L+A      ++ +  ++LPK+ +F+   YY+GGFEPKM
Sbjct: 1   MASTVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKS-AFSGG-YYRGGFEPKM 58

Query: 70  TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE 122
           TKREA+LILGVS +AN+ KI++AH+RI+ LNHPD+GGSPY+AAKINEAKDLLE
Sbjct: 59  TKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLE 111

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Pongo abelii (taxid: 9601)

>sp|Q96DA6|TIM14_HUMAN Mitochondrial import inner membrane translocase subunit TIM14 OS=Homo sapiens GN=DNAJC19 PE=1 SV=3

 Score =  143 bits (361), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 68/113 (60%), Positives = 91/113 (80%), Gaps = 2/113 (1%)

Query: 10  CASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKM 69
            AST +  GL +AA G+AGRY+L+A      ++ +  ++LPK+ +F+   YY+GGFEPKM
Sbjct: 1   MASTVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKS-AFSGG-YYRGGFEPKM 58

Query: 70  TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE 122
           TKREA+LILGVS +AN+ KI++AH+RI+ LNHPD+GGSPY+AAKINEAKDLLE
Sbjct: 59  TKREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLE 111

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Homo sapiens (taxid: 9606)

>sp|Q3ZBN8|TIM14_BOVIN Mitochondrial import inner membrane translocase subunit TIM14 OS=Bos taurus GN=DNAJC19 PE=3 SV=3

 Score =  141 bits (356), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 68/112 (60%), Positives = 89/112 (79%), Gaps = 2/112 (1%)

Query: 11  ASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMT 70
           AST +  GL +AA G+AGRY L+A      ++ +  ++LPK  +F+   YY+GGFEPKMT
Sbjct: 2   ASTVVAVGLTIAAAGFAGRYALQAMKHMEPQVKQVFQSLPKT-AFSGG-YYRGGFEPKMT 59

Query: 71  KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE 122
           KREA+LILGVS +AN+ KI++AH+RI+ LNHPD+GGSPY+AAKINEAKDLLE
Sbjct: 60  KREAALILGVSPTANKAKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLE 111

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Bos taurus (taxid: 9913)

>sp|Q6PBT7|TIM14_DANRE Mitochondrial import inner membrane translocase subunit TIM14 OS=Danio rerio GN=dnajc19 PE=2 SV=1

 Score =  135 bits (341), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 66/112 (58%), Positives = 87/112 (77%), Gaps = 3/112 (2%)

Query: 11  ASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMT 70
           AST +  GL LAA G+ GRY ++A      ++ +AL+A   ++S   S YY+GGF+PKM 
Sbjct: 2   ASTMVAVGLTLAAAGFTGRYAVRAMKHMEPQVKQALEA---SKSAFGSGYYRGGFDPKMN 58

Query: 71  KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE 122
           +REASLILGVS +AN+ KI+EAH++++ LNHPDRGGSPYLAAKINEAKDLL+
Sbjct: 59  RREASLILGVSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLLD 110

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Danio rerio (taxid: 7955)

>sp|Q9CQV7|TIM14_MOUSE Mitochondrial import inner membrane translocase subunit TIM14 OS=Mus musculus GN=Dnajc19 PE=2 SV=3

 Score =  127 bits (320), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 68/112 (60%), Positives = 88/112 (78%), Gaps = 2/112 (1%)

Query: 11  ASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMT 70
           AST +  GL +AA G+AGRY+L+A      ++ +  ++LPK  S     YY+GGFEPKMT
Sbjct: 2   ASTVVAVGLTIAAAGFAGRYVLQAMKHVEPQVKQVFQSLPK--SAFGGGYYRGGFEPKMT 59

Query: 71  KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE 122
           KREA+LILGVS +AN+ KI++AH+RI+ LNHPD+GGSPY+AAKINEAKDLLE
Sbjct: 60  KREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLE 111

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Mus musculus (taxid: 10090)

>sp|P91454|TIM14_CAEEL Mitochondrial import inner membrane translocase subunit TIM14 OS=Caenorhabditis elegans GN=dnj-21 PE=3 SV=1

 Score =  125 bits (315), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 64/111 (57%), Positives = 84/111 (75%), Gaps = 5/111 (4%)

Query: 15  ILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREA 74
           I+ GLGLAAVG+  RY+L+      A + + ++A+P A   A S YY+GGF+ KM++ EA
Sbjct: 6   IVAGLGLAAVGFGARYVLRN----QALIKKGMEAIPVAGG-AFSNYYRGGFDQKMSRAEA 60

Query: 75  SLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
           + ILGV+ SA   KIKEAHK+++ +NHPDRGGSPYLAAKINEAKDL+E SK
Sbjct: 61  AKILGVAPSAKPAKIKEAHKKVMIVNHPDRGGSPYLAAKINEAKDLMESSK 111

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Caenorhabditis elegans (taxid: 6239)

>sp|Q78YY6|DJC15_MOUSE DnaJ homolog subfamily C member 15 OS=Mus musculus GN=Dnajc15 PE=2 SV=1

 Score =  124 bits (310), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 69/116 (59%), Positives = 81/116 (69%), Gaps = 15/116 (12%)

Query: 15  ILTGLGLAAVGYAGRYI------LKAAPMASARLNEALKALPKAESFANSKYYKGGFEPK 68
           +  GLG+AAV +AGRY       L+    A+AR         K  S + S YYKGGFE K
Sbjct: 39  LAVGLGVAAVAFAGRYAFQIWKPLEQVITATAR---------KISSPSFSSYYKGGFEQK 89

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS 124
           M+KREASLILGVS SA + KI+ AHKRI+ LNHPD+GGSPYLA+KINEAKDLLE S
Sbjct: 90  MSKREASLILGVSPSAGKAKIRTAHKRIMILNHPDKGGSPYLASKINEAKDLLEAS 145

Mus musculus (taxid: 10090)

>sp|Q9Y5T4|DJC15_HUMAN DnaJ homolog subfamily C member 15 OS=Homo sapiens GN=DNAJC15 PE=1 SV=2

 Score =  121 bits (304), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 62/110 (56%), Positives = 78/110 (70%), Gaps = 3/110 (2%)

Query: 15  ILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREA 74
           I  GLG+AA+ +AGRY  +        + E  K +    SF  S YYKGGFE KM++REA
Sbjct: 41  IAVGLGVAALAFAGRYAFRIWKPLEQVITETAKKI-STPSF--SSYYKGGFEQKMSRREA 97

Query: 75  SLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS 124
            LILGVS SA + KI+ AH+R++ LNHPD+GGSPY+AAKINEAKDLLE +
Sbjct: 98  GLILGVSPSAGKAKIRTAHRRVMILNHPDKGGSPYVAAKINEAKDLLETT 147

Homo sapiens (taxid: 9606)

>sp|Q617M0|TIM14_CAEBR Mitochondrial import inner membrane translocase subunit TIM14 OS=Caenorhabditis briggsae GN=dnj-21 PE=3 SV=1

 Score =  121 bits (303), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 60/111 (54%), Positives = 82/111 (73%), Gaps = 6/111 (5%)

Query: 15  ILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREA 74
           I  GLGLAAVG+  RY+L+      A + + ++ALP A     + YY+GGF+ KM++ EA
Sbjct: 6   IAAGLGLAAVGFGARYVLRN----QALIKKGMEALPVAGGL--NSYYRGGFDQKMSRSEA 59

Query: 75  SLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
           + ILG++ SA   KIK+AHK+++ +NHPDRGGSPYLAAKINEAKDL+E +K
Sbjct: 60  AKILGITPSAKPAKIKDAHKKVMIVNHPDRGGSPYLAAKINEAKDLMESTK 110

Probable component of the PAM complex, a complex required for the translocation of transit peptide-containing proteins from the inner membrane into the mitochondrial matrix in an ATP-dependent manner. May act as a co-chaperone that stimulate the ATP-dependent activity.

Caenorhabditis briggsae (taxid: 6238)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
195427395	139	GK17173 [Drosophila willistoni] gi|19415	0.92	0.827	0.692	7e-41
195493469	128	GE21822 [Drosophila yakuba] gi|194180533	0.968	0.945	0.666	1e-40
195589527	128	GD14312 [Drosophila simulans] gi|1941965	0.952	0.929	0.677	2e-40
195128765	134	GI13707 [Drosophila mojavensis] gi|19392	0.912	0.850	0.689	4e-40
194748224	130	GF25273 [Drosophila ananassae] gi|190623	0.936	0.9	0.680	5e-40
195326826	128	GM25281 [Drosophila sechellia] gi|194119	0.952	0.929	0.669	9e-40
221331075	128	CG7394, isoform B [Drosophila melanogast	0.952	0.929	0.669	1e-39
114052917	119	DnaJ domain-containing protein [Bombyx m	0.928	0.974	0.686	2e-39
195379638	132	GJ14049 [Drosophila virilis] gi|19415574	0.912	0.863	0.672	3e-39
195018218	130	GH14855 [Drosophila grimshawi] gi|193898	0.912	0.876	0.672	4e-39

>gi|195427395|ref|XP_002061762.1| GK17173 [Drosophila willistoni] gi|194157847|gb|EDW72748.1| GK17173 [Drosophila willistoni]

 Score =  171 bits (432), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 81/117 (69%), Positives = 101/117 (86%), Gaps = 2/117 (1%)

Query: 11  ASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGGFEPK 68
           AS+ IL GLG+AAVG+AG+++++  P  + ++NEALK LPK  AES ANSKYYKGGFEPK
Sbjct: 23  ASSLILAGLGVAAVGFAGKHLVRRMPQMTTKINEALKNLPKFDAESMANSKYYKGGFEPK 82

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
           M+KREA+LILGV+ SAN++KIK+AHK+I+ LNHPDRGGSPYLAAKINEAKD L+  K
Sbjct: 83  MSKREAALILGVNPSANKLKIKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFLDSGK 139

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195493469|ref|XP_002094432.1| GE21822 [Drosophila yakuba] gi|194180533|gb|EDW94144.1| GE21822 [Drosophila yakuba]

 Score =  170 bits (430), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 82/123 (66%), Positives = 104/123 (84%), Gaps = 2/123 (1%)

Query: 5   SSSSPCASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYK 62
           ++S P AS+ IL GLG+AAVG+AG+++++  P  + + NEALK LPK  AES A SKYYK
Sbjct: 6   NNSIPKASSVILAGLGVAAVGFAGKHLMRRMPQMTTKFNEALKNLPKFDAESMAASKYYK 65

Query: 63  GGFEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE 122
           GGF+PKM KREASLILGVS SA+++KIK+AHK+I+ LNHPDRGGSPYLAAKINEAKD L+
Sbjct: 66  GGFDPKMNKREASLILGVSPSASKIKIKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFLD 125

Query: 123 QSK 125
           ++K
Sbjct: 126 KAK 128

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195589527|ref|XP_002084503.1| GD14312 [Drosophila simulans] gi|194196512|gb|EDX10088.1| GD14312 [Drosophila simulans]

 Score =  169 bits (428), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 82/121 (67%), Positives = 102/121 (84%), Gaps = 2/121 (1%)

Query: 7   SSPCASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGG 64
           S P AS+ IL GLG+AAVG+AG+++++  P  + + NEALK LPK  AES A SKYYKGG
Sbjct: 8   SIPKASSVILAGLGVAAVGFAGKHLMRRMPQMTTKFNEALKNLPKFDAESMAASKYYKGG 67

Query: 65  FEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS 124
           F+PKM KREASLILGVS SA+++KIK+AHK+I+ LNHPDRGGSPYLAAKINEAKD L+++
Sbjct: 68  FDPKMNKREASLILGVSPSASKIKIKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFLDKA 127

Query: 125 K 125
           K
Sbjct: 128 K 128

Source: Drosophila simulans

Species: Drosophila simulans

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195128765|ref|XP_002008832.1| GI13707 [Drosophila mojavensis] gi|193920441|gb|EDW19308.1| GI13707 [Drosophila mojavensis]

 Score =  168 bits (425), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 80/116 (68%), Positives = 100/116 (86%), Gaps = 2/116 (1%)

Query: 12  STAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGGFEPKM 69
           S+ IL GLG+AAVG+AG+++L+  P  +++ NEALK LPK  AES AN+KYYKGGF+PKM
Sbjct: 19  SSIILAGLGVAAVGFAGKHLLRRMPQMTSKFNEALKNLPKFDAESMANAKYYKGGFDPKM 78

Query: 70  TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
            KREASLILGVS SA+++K+K+AHKRI+ LNHPDRGGSPYLAAKINEAKD L+ +K
Sbjct: 79  NKREASLILGVSPSASKLKVKDAHKRIMLLNHPDRGGSPYLAAKINEAKDFLDNAK 134

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194748224|ref|XP_001956549.1| GF25273 [Drosophila ananassae] gi|190623831|gb|EDV39355.1| GF25273 [Drosophila ananassae]

 Score =  167 bits (424), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 81/119 (68%), Positives = 100/119 (84%), Gaps = 2/119 (1%)

Query: 9   PCASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGGFE 66
           P AS+ IL GLG+AAVG+AG+++L+  P  + + NEALK LPK  AES A SKYYKGGF+
Sbjct: 12  PKASSVILAGLGVAAVGFAGKHLLRRMPQMTTKFNEALKNLPKFDAESMAASKYYKGGFD 71

Query: 67  PKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
           PKM KREA+LILGVS SA+++KIK+AHK+I+ LNHPDRGGSPYLAAKINEAKD L+ +K
Sbjct: 72  PKMNKREAALILGVSPSASKLKIKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFLDNAK 130

Source: Drosophila ananassae

Species: Drosophila ananassae

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195326826|ref|XP_002030126.1| GM25281 [Drosophila sechellia] gi|194119069|gb|EDW41112.1| GM25281 [Drosophila sechellia]

 Score =  167 bits (422), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 101/121 (83%), Gaps = 2/121 (1%)

Query: 7   SSPCASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGG 64
           S P AS+ IL GLG+AAVG+AG+++++  P  + + NEALK LPK  AES A  KYYKGG
Sbjct: 8   SIPKASSVILAGLGVAAVGFAGKHLMRRMPQMTTKFNEALKNLPKFDAESMAACKYYKGG 67

Query: 65  FEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS 124
           F+PKM KREASLILGVS SA+++KIK+AHK+I+ LNHPDRGGSPYLAAKINEAKD L+++
Sbjct: 68  FDPKMNKREASLILGVSPSASKIKIKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFLDKA 127

Query: 125 K 125
           K
Sbjct: 128 K 128

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|221331075|ref|NP_001137933.1| CG7394, isoform B [Drosophila melanogaster] gi|220902552|gb|ACL83288.1| CG7394, isoform B [Drosophila melanogaster]

 Score =  166 bits (421), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 81/121 (66%), Positives = 101/121 (83%), Gaps = 2/121 (1%)

Query: 7   SSPCASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGG 64
           S P AS+ IL GL +AAVG+AG+++++  P  + + NEALK LPK  AES A SKYYKGG
Sbjct: 8   SIPKASSVILAGLSVAAVGFAGKHLMRRMPQMTTKFNEALKNLPKYDAESMAASKYYKGG 67

Query: 65  FEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS 124
           F+PKM KREASLILGVS SA+++KIK+AHK+I+ LNHPDRGGSPYLAAKINEAKD L+++
Sbjct: 68  FDPKMNKREASLILGVSPSASKIKIKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFLDKA 127

Query: 125 K 125
           K
Sbjct: 128 K 128

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|114052917|ref|NP_001040116.1| DnaJ domain-containing protein [Bombyx mori] gi|87248103|gb|ABD36104.1| DnaJ domain-containing protein [Bombyx mori]

 Score =  166 bits (420), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 81/118 (68%), Positives = 99/118 (83%), Gaps = 2/118 (1%)

Query: 10  CASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGGFEP 67
            AS+ IL GLG+AAVG+AGRY+LK  P AS +  EA+K LPK  +E+ ANSKYYKGGFEP
Sbjct: 1   MASSIILAGLGMAAVGFAGRYVLKQMPNASMKFAEAVKNLPKFDSETLANSKYYKGGFEP 60

Query: 68  KMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
           KMTKREA+LILGVS +A++ KI++AH++I+ LNHPDRGGSP +AAKINEAKDLLE  K
Sbjct: 61  KMTKREAALILGVSPTASKAKIRDAHRKIMLLNHPDRGGSPLIAAKINEAKDLLESGK 118

Source: Bombyx mori

Species: Bombyx mori

Genus: Bombyx

Family: Bombycidae

Order: Lepidoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195379638|ref|XP_002048585.1| GJ14049 [Drosophila virilis] gi|194155743|gb|EDW70927.1| GJ14049 [Drosophila virilis]

 Score =  165 bits (417), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 78/116 (67%), Positives = 100/116 (86%), Gaps = 2/116 (1%)

Query: 12  STAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGGFEPKM 69
           S+ IL GLG+AAVG+AG+++L+  P  +++ NEALK LPK  AES AN+KYYKGGF+PKM
Sbjct: 17  SSIILAGLGVAAVGFAGKHLLRRMPQMTSKFNEALKNLPKFDAESMANAKYYKGGFDPKM 76

Query: 70  TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
            KREA+LILGVS SA+++K+K+AHK+I+ LNHPDRGGSPYLAAKINEAKD L+ +K
Sbjct: 77  NKREAALILGVSPSASKLKVKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFLDSAK 132

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195018218|ref|XP_001984743.1| GH14855 [Drosophila grimshawi] gi|193898225|gb|EDV97091.1| GH14855 [Drosophila grimshawi]

 Score =  165 bits (417), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 78/116 (67%), Positives = 99/116 (85%), Gaps = 2/116 (1%)

Query: 12  STAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGGFEPKM 69
           S+ IL GLG+AAVG+AG+++L+  P  +A  NEALK LPK  AES AN+KYYKGGF+PKM
Sbjct: 15  SSLILAGLGVAAVGFAGKHLLRRMPQMTATFNEALKNLPKFDAESMANAKYYKGGFDPKM 74

Query: 70  TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
            KREA+LILGVS SA+++K+K+AHK+I+ LNHPDRGGSPYLAAKINEAKD ++ +K
Sbjct: 75  NKREAALILGVSPSASKLKVKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFMDNAK 130

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	125
FB|FBgn0036173	118	CG7394 [Drosophila melanogaste	0.92	0.974	0.675	4.3e-38
UNIPROTKB|Q96DA6	116	DNAJC19 "Mitochondrial import	0.904	0.974	0.603	8.5e-33
UNIPROTKB|Q3ZBN8	116	DNAJC19 "Mitochondrial import	0.904	0.974	0.603	1.8e-32
UNIPROTKB|F1SGA9	116	DNAJC19 "Uncharacterized prote	0.904	0.974	0.603	2.3e-32
ZFIN|ZDB-GENE-040426-1730	115	dnajc19 "DnaJ (Hsp40) homolog,	0.896	0.973	0.586	1.1e-30
ZFIN|ZDB-GENE-040801-216	149	dnajc15 "DnaJ (Hsp40) homolog,	0.808	0.677	0.613	9.1e-29
UNIPROTKB|A1A4R3	149	DNAJC15 "Uncharacterized prote	0.864	0.724	0.592	1.9e-28
WB|WBGene00001039	112	dnj-21 [Caenorhabditis elegans	0.848	0.946	0.576	2.4e-28
MGI|MGI:1913398	149	Dnajc15 "DnaJ (Hsp40) homolog,	0.848	0.711	0.612	8.2e-28
RGD|1307154	149	Dnajc15 "DnaJ (Hsp40) homolog,	0.848	0.711	0.603	1.3e-27

FB|FBgn0036173 CG7394 [Drosophila melanogaster (taxid:7227)]

 Score = 408 (148.7 bits), Expect = 4.3e-38, P = 4.3e-38
 Identities = 79/117 (67%), Positives = 99/117 (84%)

Query:    11 ASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPK--AESFANSKYYKGGFEPK 68
             AS+ IL GL +AAVG+AG+++++  P  + + NEALK LPK  AES A SKYYKGGF+PK
Sbjct:     2 ASSVILAGLSVAAVGFAGKHLMRRMPQMTTKFNEALKNLPKYDAESMAASKYYKGGFDPK 61

Query:    69 MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
             M KREASLILGVS SA+++KIK+AHK+I+ LNHPDRGGSPYLAAKINEAKD L+++K
Sbjct:    62 MNKREASLILGVSPSASKIKIKDAHKKIMLLNHPDRGGSPYLAAKINEAKDFLDKAK 118

GO:0022008 "neurogenesis" evidence=IMP

UNIPROTKB|Q96DA6 DNAJC19 "Mitochondrial import inner membrane translocase subunit TIM14" [Homo sapiens (taxid:9606)]

 Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
 Identities = 70/116 (60%), Positives = 94/116 (81%)

Query:    11 ASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMT 70
             AST +  GL +AA G+AGRY+L+A      ++ +  ++LPK+ +F+   YY+GGFEPKMT
Sbjct:     2 ASTVVAVGLTIAAAGFAGRYVLQAMKHMEPQVKQVFQSLPKS-AFSGG-YYRGGFEPKMT 59

Query:    71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE-QSK 125
             KREA+LILGVS +AN+ KI++AH+RI+ LNHPD+GGSPY+AAKINEAKDLLE Q+K
Sbjct:    60 KREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0005739 "mitochondrion" evidence=IDA

GO:0006457 "protein folding" evidence=NAS

GO:0007601 "visual perception" evidence=IMP

GO:0016021 "integral to membrane" evidence=NAS

GO:0006626 "protein targeting to mitochondrion" evidence=NAS;TAS

GO:0048806 "genitalia development" evidence=IMP

GO:0044267 "cellular protein metabolic process" evidence=TAS

UNIPROTKB|Q3ZBN8 DNAJC19 "Mitochondrial import inner membrane translocase subunit TIM14" [Bos taurus (taxid:9913)]

 Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
 Identities = 70/116 (60%), Positives = 92/116 (79%)

Query:    11 ASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMT 70
             AST +  GL +AA G+AGRY L+A      ++ +  ++LPK  +F+   YY+GGFEPKMT
Sbjct:     2 ASTVVAVGLTIAAAGFAGRYALQAMKHMEPQVKQVFQSLPKT-AFSGG-YYRGGFEPKMT 59

Query:    71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE-QSK 125
             KREA+LILGVS +AN+ KI++AH+RI+ LNHPD+GGSPY+AAKINEAKDLLE Q+K
Sbjct:    60 KREAALILGVSPTANKAKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

UNIPROTKB|F1SGA9 DNAJC19 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 354 (129.7 bits), Expect = 2.3e-32, P = 2.3e-32
 Identities = 70/116 (60%), Positives = 93/116 (80%)

Query:    11 ASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMT 70
             AST +  GL +AA G+AGRY L+A      ++ +  ++LPK+ +F+   YY+GGFEPKMT
Sbjct:     2 ASTVVAVGLTIAAAGFAGRYALQAMKHMEPQVKQVFQSLPKS-AFSGG-YYRGGFEPKMT 59

Query:    71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE-QSK 125
             KREA+LILGVS +AN+ KI++AH+RI+ LNHPD+GGSPY+AAKINEAKDLLE Q+K
Sbjct:    60 KREAALILGVSPTANKGKIRDAHRRIMLLNHPDKGGSPYIAAKINEAKDLLEGQAK 115

GO:0048806 "genitalia development" evidence=IEA

GO:0007601 "visual perception" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

ZFIN|ZDB-GENE-040426-1730 dnajc19 "DnaJ (Hsp40) homolog, subfamily C, member 19" [Danio rerio (taxid:7955)]

 Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
 Identities = 68/116 (58%), Positives = 90/116 (77%)

Query:    11 ASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMT 70
             AST +  GL LAA G+ GRY ++A      ++ +AL+A   ++S   S YY+GGF+PKM 
Sbjct:     2 ASTMVAVGLTLAAAGFTGRYAVRAMKHMEPQVKQALEA---SKSAFGSGYYRGGFDPKMN 58

Query:    71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE-QSK 125
             +REASLILGVS +AN+ KI+EAH++++ LNHPDRGGSPYLAAKINEAKDLL+ Q+K
Sbjct:    59 RREASLILGVSPTANKTKIREAHRKLMILNHPDRGGSPYLAAKINEAKDLLDGQAK 114

GO:0005739 "mitochondrion" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005743 "mitochondrial inner membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

ZFIN|ZDB-GENE-040801-216 dnajc15 "DnaJ (Hsp40) homolog, subfamily C, member 15" [Danio rerio (taxid:7955)]

 Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
 Identities = 65/106 (61%), Positives = 81/106 (76%)

Query:    18 GLGLAAVGYAGRYILKA-APMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREASL 76
             GLG+AA G+AGRY      P+    + EA K  P + SF  S YYKGGFE KMT+REASL
Sbjct:    43 GLGVAAAGFAGRYAFHLWRPLGQV-ITEAAKKFPSS-SF--SAYYKGGFEQKMTRREASL 98

Query:    77 ILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE 122
             ILG+S ++ + K++EAH+RI+ LNHPD+GGSPYLAAKINEAKDLL+
Sbjct:    99 ILGISPTSTKTKVREAHRRIMVLNHPDKGGSPYLAAKINEAKDLLD 144

GO:0048793 "pronephros development" evidence=IEA

UNIPROTKB|A1A4R3 DNAJC15 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
 Identities = 67/113 (59%), Positives = 83/113 (73%)

Query:    11 ASTAILTGLGLAAVGYAGRYILKA-APMASARLNEALKALPKAESFANSKYYKGGFEPKM 69
             A + I  GLG+AA+G+AGRY  +   P+    + E  K +    SF  S YYKGGFE KM
Sbjct:    36 ARSLIAVGLGIAALGFAGRYAFQIWKPLGQV-ITETAKKI-STPSF--SSYYKGGFEQKM 91

Query:    70 TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE 122
             ++REASLILGVS SA++ KI+ AH+RI+ LNHPD+GGSPYLA KINEAKDLLE
Sbjct:    92 SRREASLILGVSPSASKAKIRAAHRRIMILNHPDKGGSPYLATKINEAKDLLE 144

GO:0005739 "mitochondrion" evidence=IEA

WB|WBGene00001039 dnj-21 [Caenorhabditis elegans (taxid:6239)]

 Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
 Identities = 64/111 (57%), Positives = 84/111 (75%)

Query:    15 ILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREA 74
             I+ GLGLAAVG+  RY+L+      A + + ++A+P A   A S YY+GGF+ KM++ EA
Sbjct:     6 IVAGLGLAAVGFGARYVLRN----QALIKKGMEAIPVAGG-AFSNYYRGGFDQKMSRAEA 60

Query:    75 SLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
             + ILGV+ SA   KIKEAHK+++ +NHPDRGGSPYLAAKINEAKDL+E SK
Sbjct:    61 AKILGVAPSAKPAKIKEAHKKVMIVNHPDRGGSPYLAAKINEAKDLMESSK 111

GO:0031072 "heat shock protein binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0040007 "growth" evidence=IMP

GO:0002119 "nematode larval development" evidence=IMP

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

GO:0006898 "receptor-mediated endocytosis" evidence=IMP

GO:0000003 "reproduction" evidence=IMP

GO:0005739 "mitochondrion" evidence=IDA

MGI|MGI:1913398 Dnajc15 "DnaJ (Hsp40) homolog, subfamily C, member 15" [Mus musculus (taxid:10090)]

 Score = 311 (114.5 bits), Expect = 8.2e-28, P = 8.2e-28
 Identities = 68/111 (61%), Positives = 80/111 (72%)

Query:    15 ILTGLGLAAVGYAGRYILKA-APMASARLNEALKALPKAESFANSKYYKGGFEPKMTKRE 73
             +  GLG+AAV +AGRY  +   P+       A K    + SF  S YYKGGFE KM+KRE
Sbjct:    39 LAVGLGVAAVAFAGRYAFQIWKPLEQVITATARKI--SSPSF--SSYYKGGFEQKMSKRE 94

Query:    74 ASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS 124
             ASLILGVS SA + KI+ AHKRI+ LNHPD+GGSPYLA+KINEAKDLLE S
Sbjct:    95 ASLILGVSPSAGKAKIRTAHKRIMILNHPDKGGSPYLASKINEAKDLLEAS 145

GO:0003674 "molecular_function" evidence=ND

GO:0005739 "mitochondrion" evidence=IDA

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1307154 Dnajc15 "DnaJ (Hsp40) homolog, subfamily C, member 15" [Rattus norvegicus (taxid:10116)]

 Score = 309 (113.8 bits), Expect = 1.3e-27, P = 1.3e-27
 Identities = 67/111 (60%), Positives = 80/111 (72%)

Query:    15 ILTGLGLAAVGYAGRYILKA-APMASARLNEALKALPKAESFANSKYYKGGFEPKMTKRE 73
             +  GLG+AAV +AGRY  +   P+       A K    + SF  S YYKGGFE KM++RE
Sbjct:    39 LAVGLGVAAVAFAGRYAFQIWKPLEQVLTATARKI--SSPSF--SSYYKGGFEQKMSRRE 94

Query:    74 ASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS 124
             ASLILGVS SA + KI+ AHKRI+ LNHPD+GGSPYLA+KINEAKDLLE S
Sbjct:    95 ASLILGVSPSAGKAKIRTAHKRIMILNHPDKGGSPYLASKINEAKDLLEAS 145

GO:0005739 "mitochondrion" evidence=IEA;ISO

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q617M0	TIM14_CAEBR	No assigned EC number	0.5405	0.84	0.9459	N/A	N/A
Q5RF34	TIM14_PONAB	No assigned EC number	0.6017	0.888	0.9568	yes	N/A
Q07914	TIM14_YEAST	No assigned EC number	0.5384	0.512	0.3809	yes	N/A
Q759D2	TIM14_ASHGO	No assigned EC number	0.4090	0.776	0.6139	yes	N/A
Q6FPU1	TIM14_CANGA	No assigned EC number	0.5362	0.544	0.4444	yes	N/A
Q96DA6	TIM14_HUMAN	No assigned EC number	0.6017	0.888	0.9568	yes	N/A
P91454	TIM14_CAEEL	No assigned EC number	0.5765	0.848	0.9464	yes	N/A
Q9UT37	TIM14_SCHPO	No assigned EC number	0.4521	0.816	0.7285	yes	N/A
Q5B4H1	TIM14_EMENI	No assigned EC number	0.4513	0.808	0.9619	yes	N/A
Q3ZBN8	TIM14_BOVIN	No assigned EC number	0.6071	0.88	0.9482	yes	N/A
Q4WI88	TIM14_ASPFU	No assigned EC number	0.4672	0.76	0.9047	yes	N/A
Q54QN1	TIM14_DICDI	No assigned EC number	0.3636	0.848	0.9380	yes	N/A
Q4I7T5	TIM14_GIBZE	No assigned EC number	0.4583	0.704	0.8380	yes	N/A
Q6CNW2	TIM14_KLULA	No assigned EC number	0.5909	0.52	0.3987	yes	N/A
Q8RV04	TI141_ARATH	No assigned EC number	0.4727	0.8	0.8928	yes	N/A
Q6PBT7	TIM14_DANRE	No assigned EC number	0.5892	0.872	0.9478	yes	N/A
Q9CQV7	TIM14_MOUSE	No assigned EC number	0.6071	0.88	0.9482	yes	N/A
Q9VTJ8	TIM14_DROME	No assigned EC number	0.6694	0.928	0.9830	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	125
PTZ00100	116	PTZ00100, PTZ00100, DnaJ chaperone protein; Provis	3e-23
smart00271	60	smart00271, DnaJ, DnaJ molecular chaperone homolog	3e-06
cd06257	55	cd06257, DnaJ, DnaJ domain or J-domain	5e-06
pfam00226	63	pfam00226, DnaJ, DnaJ domain	6e-05
TIGR03835	871	TIGR03835, termin_org_DnaJ, terminal organelle ass	6e-05
PTZ00037	421	PTZ00037, PTZ00037, DnaJ_C chaperone protein; Prov	9e-05
TIGR02349	354	TIGR02349, DnaJ_bact, chaperone protein DnaJ	1e-04
PRK14296	372	PRK14296, PRK14296, chaperone protein DnaJ; Provis	1e-04
PRK14282	369	PRK14282, PRK14282, chaperone protein DnaJ; Provis	3e-04
PRK14301	373	PRK14301, PRK14301, chaperone protein DnaJ; Provis	5e-04
PRK14280	376	PRK14280, PRK14280, chaperone protein DnaJ; Provis	6e-04
PRK10767	371	PRK10767, PRK10767, chaperone protein DnaJ; Provis	0.001
PRK14287	371	PRK14287, PRK14287, chaperone protein DnaJ; Provis	0.002
PRK14291	382	PRK14291, PRK14291, chaperone protein DnaJ; Provis	0.002
PRK14299	291	PRK14299, PRK14299, chaperone protein DnaJ; Provis	0.003
PRK14292	371	PRK14292, PRK14292, chaperone protein DnaJ; Provis	0.004
COG0484	371	COG0484, DnaJ, DnaJ-class molecular chaperone with	0.004

>gnl|CDD|240265 PTZ00100, PTZ00100, DnaJ chaperone protein; Provisional

 Score = 86.4 bits (214), Expect = 3e-23
 Identities = 44/108 (40%), Positives = 63/108 (58%)

Query: 14  AILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKRE 73
           A+  G G+ AV Y  RY+       S  ++  L     +      K    GFE  M+K E
Sbjct: 7   ALTFGGGVLAVRYGYRYLKNQKIFGSNNMSFPLSGFNPSLGSLFLKNDLKGFENPMSKSE 66

Query: 74  ASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLL 121
           A  IL +S +A++ +I+EAHK+++  NHPD GGS Y+A+K+NEAKDLL
Sbjct: 67  AYKILNISPTASKERIREAHKQLMLRNHPDNGGSTYIASKVNEAKDLL 114

Length = 116

>gnl|CDD|197617 smart00271, DnaJ, DnaJ molecular chaperone homology domain

 Score = 41.5 bits (98), Expect = 3e-06
 Identities = 17/51 (33%), Positives = 29/51 (56%), Gaps = 5/51 (9%)

Query: 77  ILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAA-----KINEAKDLLE 122
           ILGV + A+  +IK+A++++    HPD+       A     +INEA ++L 
Sbjct: 6   ILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLS 56

Length = 60

>gnl|CDD|99751 cd06257, DnaJ, DnaJ domain or J-domain

 Score = 40.6 bits (96), Expect = 5e-06
 Identities = 16/49 (32%), Positives = 28/49 (57%), Gaps = 4/49 (8%)

Query: 77  ILGVSQSANRMKIKEAHKRIITLNHPDRG----GSPYLAAKINEAKDLL 121
           ILGV   A+  +IK+A++++    HPD+      +     +INEA ++L
Sbjct: 5   ILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVL 53

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification. Length = 55

>gnl|CDD|215804 pfam00226, DnaJ, DnaJ domain

 Score = 37.9 bits (89), Expect = 6e-05
 Identities = 19/49 (38%), Positives = 30/49 (61%), Gaps = 4/49 (8%)

Query: 77  ILGVSQSANRMKIKEAHKRIITLNHPDR-GGSPYLAAK---INEAKDLL 121
           ILGV + A+  +IK+A++++    HPD+  G P    K   INEA ++L
Sbjct: 5   ILGVPRDASDEEIKKAYRKLALKYHPDKNPGDPAAEEKFKEINEAYEVL 53

DnaJ domains (J-domains) are associated with hsp70 heat-shock system and it is thought that this domain mediates the interaction. DnaJ-domain is therefore part of a chaperone (protein folding) system. The T-antigens, although not in Prosite are confirmed as DnaJ containing domains from literature. Length = 63

>gnl|CDD|234368 TIGR03835, termin_org_DnaJ, terminal organelle assembly protein TopJ

 Score = 40.6 bits (94), Expect = 6e-05
 Identities = 22/58 (37%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 71  KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLA---AKINEAKDLLEQSK 125
           KR+   +LG+ + A+  +IK+A +++    HPDR  +P  A   A+INEA D+L   K
Sbjct: 1   KRDYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNPK 58

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility [Cellular processes, Chemotaxis and motility]. Length = 871

>gnl|CDD|240236 PTZ00037, PTZ00037, DnaJ_C chaperone protein; Provisional

 Score = 40.2 bits (94), Expect = 9e-05
 Identities = 17/65 (26%), Positives = 33/65 (50%), Gaps = 14/65 (21%)

Query: 57  NSKYYKGGFEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINE 116
           N K Y+              +L +S+     +IK+A++++   +HPD+GG P    +I+ 
Sbjct: 27  NEKLYE--------------VLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISR 72

Query: 117 AKDLL 121
           A ++L
Sbjct: 73  AYEVL 77

Length = 421

>gnl|CDD|233829 TIGR02349, DnaJ_bact, chaperone protein DnaJ

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 3/48 (6%)

Query: 77  ILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAK---INEAKDLL 121
           ILGVS+ A+  +IK+A++++    HPDR        K   INEA ++L
Sbjct: 5   ILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVL 52

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family. Length = 354

>gnl|CDD|237666 PRK14296, PRK14296, chaperone protein DnaJ; Provisional

 Score = 39.5 bits (92), Expect = 1e-04
 Identities = 21/56 (37%), Positives = 35/56 (62%), Gaps = 3/56 (5%)

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAK---INEAKDLL 121
           M K++   +LGVS++A+  +I++A++++    HPD   SP    K   INEA D+L
Sbjct: 1   MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVL 56

Length = 372

>gnl|CDD|184603 PRK14282, PRK14282, chaperone protein DnaJ; Provisional

 Score = 38.6 bits (90), Expect = 3e-04
 Identities = 16/36 (44%), Positives = 25/36 (69%)

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDR 104
             K++   ILGVS++A + +IK A+KR++   HPDR
Sbjct: 1   REKKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDR 36

Length = 369

>gnl|CDD|237668 PRK14301, PRK14301, chaperone protein DnaJ; Provisional

 Score = 37.8 bits (88), Expect = 5e-04
 Identities = 19/55 (34%), Positives = 33/55 (60%), Gaps = 1/55 (1%)

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRG-GSPYLAAKINEAKDLLE 122
           M++R+   +LGVS+ A+  +IK+A++++    HPDR   +P    K  EA +  E
Sbjct: 1   MSQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYE 55

Length = 373

>gnl|CDD|237656 PRK14280, PRK14280, chaperone protein DnaJ; Provisional

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 18/54 (33%), Positives = 30/54 (55%)

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLE 122
           M KR+   +LGVS+SA++ +IK+A++++    HPD         K  E  +  E
Sbjct: 1   MAKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYE 54

Length = 376

>gnl|CDD|236757 PRK10767, PRK10767, chaperone protein DnaJ; Provisional

 Score = 36.7 bits (86), Expect = 0.001
 Identities = 21/57 (36%), Positives = 34/57 (59%), Gaps = 4/57 (7%)

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDR-GGSPYLAAK---INEAKDLL 121
           M KR+   +LGVS++A+  +IK+A++++    HPDR  G      K   I EA ++L
Sbjct: 1   MAKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVL 57

Length = 371

>gnl|CDD|237659 PRK14287, PRK14287, chaperone protein DnaJ; Provisional

 Score = 36.5 bits (84), Expect = 0.002
 Identities = 16/51 (31%), Positives = 31/51 (60%)

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKD 119
           M+KR+   +LGV ++A+  ++K+A++++    HPD   +P    K  E K+
Sbjct: 1   MSKRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKE 51

Length = 371

>gnl|CDD|237661 PRK14291, PRK14291, chaperone protein DnaJ; Provisional

 Score = 36.3 bits (84), Expect = 0.002
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)

Query: 70  TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAK---INEAKDLL 121
            K++   ILGVS++A + +IK+A++R+    HPD   +P    K   INEA  +L
Sbjct: 1   AKKDYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVL 55

Length = 382

>gnl|CDD|237667 PRK14299, PRK14299, chaperone protein DnaJ; Provisional

 Score = 35.7 bits (82), Expect = 0.003
 Identities = 21/56 (37%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAK---INEAKDLL 121
           M  ++   ILGV ++A++ +IK+A K++    HPD   SP    K   INEA  +L
Sbjct: 1   MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVL 56

Length = 291

>gnl|CDD|237662 PRK14292, PRK14292, chaperone protein DnaJ; Provisional

 Score = 35.2 bits (81), Expect = 0.004
 Identities = 19/48 (39%), Positives = 30/48 (62%), Gaps = 3/48 (6%)

Query: 77  ILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLA---AKINEAKDLL 121
           +LGVS++A+  +IK A++++    HPDR      A   A+INEA  +L
Sbjct: 7   LLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVL 54

Length = 371

>gnl|CDD|223560 COG0484, DnaJ, DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

 Score = 35.3 bits (82), Expect = 0.004
 Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 4/57 (7%)

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDR-GGSPYLAAK---INEAKDLL 121
           M KR+   ILGVS+ A+  +IK+A++++    HPDR  G      K   INEA ++L
Sbjct: 1   MAKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVL 57

Length = 371

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	125
KOG0723|consensus	112		99.97
PTZ00100	116	DnaJ chaperone protein; Provisional	99.93
PF03656	127	Pam16: Pam16; InterPro: IPR005341 The Pam16 protei	99.93
KOG3442|consensus	132		99.89
PHA03102	153	Small T antigen; Reviewed	99.61
COG0484	371	DnaJ DnaJ-class molecular chaperone with C-termina	99.6
smart00271	60	DnaJ DnaJ molecular chaperone homology domain.	99.57
cd06257	55	DnaJ DnaJ domain or J-domain. DnaJ/Hsp40 (heat sho	99.56
PTZ00037	421	DnaJ_C chaperone protein; Provisional	99.55
KOG0713|consensus	336		99.49
PF00226	64	DnaJ: DnaJ domain; InterPro: IPR001623 The prokary	99.49
PRK14296	372	chaperone protein DnaJ; Provisional	99.45
PRK09430	267	djlA Dna-J like membrane chaperone protein; Provis	99.43
PRK14299	291	chaperone protein DnaJ; Provisional	99.41
PRK14288	369	chaperone protein DnaJ; Provisional	99.41
PRK14286	372	chaperone protein DnaJ; Provisional	99.4
PRK14287	371	chaperone protein DnaJ; Provisional	99.39
PRK14279	392	chaperone protein DnaJ; Provisional	99.38
PRK14282	369	chaperone protein DnaJ; Provisional	99.37
PRK10767	371	chaperone protein DnaJ; Provisional	99.36
PRK14285	365	chaperone protein DnaJ; Provisional	99.36
PRK14276	380	chaperone protein DnaJ; Provisional	99.36
PRK14280	376	chaperone protein DnaJ; Provisional	99.35
PRK14294	366	chaperone protein DnaJ; Provisional	99.35
KOG0712|consensus	337		99.35
PRK14301	373	chaperone protein DnaJ; Provisional	99.34
PHA02624	647	large T antigen; Provisional	99.34
KOG0721|consensus	230		99.34
PRK14283	378	chaperone protein DnaJ; Provisional	99.34
PRK14298	377	chaperone protein DnaJ; Provisional	99.33
PRK14278	378	chaperone protein DnaJ; Provisional	99.33
PRK10266	306	curved DNA-binding protein CbpA; Provisional	99.33
PRK14295	389	chaperone protein DnaJ; Provisional	99.32
PRK14297	380	chaperone protein DnaJ; Provisional	99.32
PRK14281	397	chaperone protein DnaJ; Provisional	99.31
PRK14277	386	chaperone protein DnaJ; Provisional	99.31
PRK14291	382	chaperone protein DnaJ; Provisional	99.28
PRK14300	372	chaperone protein DnaJ; Provisional	99.28
KOG0716|consensus	279		99.27
KOG0717|consensus	508		99.25
TIGR02349	354	DnaJ_bact chaperone protein DnaJ. This model repre	99.25
PRK14284	391	chaperone protein DnaJ; Provisional	99.24
PRK14292	371	chaperone protein DnaJ; Provisional	99.24
PRK14290	365	chaperone protein DnaJ; Provisional	99.23
PRK14289	386	chaperone protein DnaJ; Provisional	99.23
KOG0718|consensus	546		99.18
PRK14293	374	chaperone protein DnaJ; Provisional	99.17
KOG0715|consensus	288		99.17
COG2214	237	CbpA DnaJ-class molecular chaperone [Posttranslati	99.11
KOG0691|consensus	296		99.08
PTZ00341	1136	Ring-infected erythrocyte surface antigen; Provisi	99.03
TIGR03835	871	termin_org_DnaJ terminal organelle assembly protei	99.01
PRK01356	166	hscB co-chaperone HscB; Provisional	98.97
PRK05014	171	hscB co-chaperone HscB; Provisional	98.97
KOG0722|consensus	329		98.93
KOG0719|consensus	264		98.91
PRK03578	176	hscB co-chaperone HscB; Provisional	98.89
PRK00294	173	hscB co-chaperone HscB; Provisional	98.88
KOG1789|consensus	2235		98.76
KOG0720|consensus	490		98.75
PRK01773	173	hscB co-chaperone HscB; Provisional	98.56
COG5407	610	SEC63 Preprotein translocase subunit Sec63 [Intrac	98.54
KOG0624|consensus	504		98.54
KOG1150|consensus	250		98.54
KOG0714|consensus	306		98.49
KOG0568|consensus	342		98.48
KOG0550|consensus	486		98.42
TIGR00714	157	hscB Fe-S protein assembly co-chaperone HscB. This	98.38
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	97.54
COG5269	379	ZUO1 Ribosome-associated chaperone zuotin [Transla	97.4
PF13446	62	RPT: A repeated domain in UCH-protein	97.19
KOG0431|consensus	453		96.82
KOG3192|consensus	168		93.57
COG1076	174	DjlA DnaJ-domain-containing proteins 1 [Posttransl	90.3
PF14687	112	DUF4460: Domain of unknown function (DUF4460)	84.11

>KOG0723|consensus

Probab=99.97  E-value=1.6e-30  Score=176.65  Aligned_cols=106  Identities=61%  Similarity=0.978  Sum_probs=91.5

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCChhhhhhhcccccCCCCCCCCHHHHHHHhCCCCCCCHHHHHHH
Q psy5624          13 TAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREASLILGVSQSANRMKIKEA   92 (125)
Q Consensus        13 ~~ii~gl~v~~~~~~~ra~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~eA~~iLgl~~~~~~~~Ik~a   92 (125)
                      ++|++|++|+++++.||++++-+..+-    ++++..+.  ....++||+|+|++.||+.||.+||||+++.+.+.||++
T Consensus         3 ~~i~~G~gvaa~a~ag~~gl~~~~~~~----qa~~~~~~--~~~~~~~y~GGF~~kMsr~EA~lIL~v~~s~~k~Kikea   76 (112)
T KOG0723|consen    3 SPIIAGLGVAALAFAGRYGLWMKTLAK----QAFKTLPK--GPFFGAFYKGGFEPKMSRREAALILGVTPSLDKDKIKEA   76 (112)
T ss_pred             hhHHHhHHHHHHHHhchhhhhchhHHH----HHHHHcCC--CcchhhhhhcccccccchHHHHHHhCCCccccHHHHHHH
Confidence            477999999999999999999333222    33444443  333568999999999999999999999999999999999


Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q psy5624          93 HKRIITLNHPDRGGSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        93 yr~l~~~~HPDkggs~~~~~~i~~Aye~L~~~  124 (125)
                      ||++|..||||+|||||++++|||||++|+..
T Consensus        77 HrriM~~NHPD~GGSPYlAsKINEAKdlLe~~  108 (112)
T KOG0723|consen   77 HRRIMLANHPDRGGSPYLASKINEAKDLLEGT  108 (112)
T ss_pred             HHHHHHcCCCcCCCCHHHHHHHHHHHHHHhcc
Confidence            99999999999999999999999999999864

>PTZ00100 DnaJ chaperone protein; Provisional

Probab=99.93  E-value=1.7e-25  Score=155.39  Aligned_cols=106  Identities=35%  Similarity=0.450  Sum_probs=82.1

Q ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCChhhhhhhcccc----cCCCCCCCCHHHHHHHhCCCCCCCHHHHHHHH
Q psy5624          18 GLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYY----KGGFEPKMTKREASLILGVSQSANRMKIKEAH   93 (125)
Q Consensus        18 gl~v~~~~~~~ra~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~m~~~eA~~iLgl~~~~~~~~Ik~ay   93 (125)
                      .+++.++.+++|+++++|++.........-.-.++....-+.|+    -.+|+..|+.+|||+||||+++++.+||+++|
T Consensus         7 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~~~~~f~~~Ms~~eAy~ILGv~~~As~~eIkkaY   86 (116)
T PTZ00100          7 ALTFGGGVLAVRYGYRYLKNQKIFGSNNMSFPLSGFNPSLGSLFLKNDLKGFENPMSKSEAYKILNISPTASKERIREAH   86 (116)
T ss_pred             HHHHhHHHHHHHHHHHHHHHHhhccCccccCCchhhhHHHHHHHhccccccccCCCCHHHHHHHcCCCCCCCHHHHHHHH
Confidence            38888899999999999986543211000000100011122222    56899999999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHhhc
Q psy5624          94 KRIITLNHPDRGGSPYLAAKINEAKDLLEQ  123 (125)
Q Consensus        94 r~l~~~~HPDkggs~~~~~~i~~Aye~L~~  123 (125)
                      |+|+++||||++||++.+++|++|||+|.+
T Consensus        87 RrLa~~~HPDkgGs~~~~~kIneAyevL~k  116 (116)
T PTZ00100         87 KQLMLRNHPDNGGSTYIASKVNEAKDLLLK  116 (116)
T ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhC
Confidence            999999999999999999999999999974

>PF03656 Pam16: Pam16; InterPro: IPR005341 The Pam16 protein is the fifth essential subunit of the pre-sequence translocase-associated protein import motor (PAM) []

Probab=99.93  E-value=2.7e-26  Score=161.84  Aligned_cols=109  Identities=29%  Similarity=0.305  Sum_probs=46.0

Q ss_pred             hhHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCChhhhhhhcccccCCCCCCCCHHHHHHHhCCCCCCCHHHH
Q psy5624          10 CASTAILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREASLILGVSQSANRMKI   89 (125)
Q Consensus        10 ma~~~ii~gl~v~~~~~~~ra~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~eA~~iLgl~~~~~~~~I   89 (125)
                      ||. .||++++|+|+.++||+|++||+++....+.+......   ...+.... .....||.+||++||||++..++++|
T Consensus         1 Ma~-riiaqiiv~G~~vvgRAf~~AyrQA~aa~~~a~~a~~~---a~~~~~a~-~~~~~Mtl~EA~~ILnv~~~~~~eeI   75 (127)
T PF03656_consen    1 MAK-RIIAQIIVTGGQVVGRAFTQAYRQAAAAAQAAAGAGQN---ASARGAAA-SNSKGMTLDEARQILNVKEELSREEI   75 (127)
T ss_dssp             -------------------------------------------------------------HHHHHHHHT--G--SHHHH
T ss_pred             ChH-HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh---cccchhHH-hhcCCCCHHHHHHHcCCCCccCHHHH
Confidence            565 46789999999999999999999987433222211110   00111111 22348999999999999999999999


Q ss_pred             HHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhc
Q psy5624          90 KEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQ  123 (125)
Q Consensus        90 k~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~  123 (125)
                      .++|++|+..|+|++|||+|+++||.+|+|+|+.
T Consensus        76 ~k~y~~Lf~~Nd~~kGGSfYLQSKV~rAKErl~~  109 (127)
T PF03656_consen   76 QKRYKHLFKANDPSKGGSFYLQSKVFRAKERLEQ  109 (127)
T ss_dssp             HHHHHHHHHHT-CCCTS-HHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCcCCCHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999999999999974

In Saccharomyces cerevisiae (Baker's yeast), Pam16 is required for preprotein translocation into the matrix, but not for protein insertion into the inner membrane [].; PDB: 2GUZ_J.

>KOG3442|consensus

Probab=99.89  E-value=2.3e-22  Score=139.90  Aligned_cols=108  Identities=24%  Similarity=0.313  Sum_probs=86.1

Q ss_pred             HHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHhCChhhhhhhcccccCCCCCCCCHHHHHHHhCCCCCCCHHHHHHHH
Q psy5624          14 AILTGLGLAAVGYAGRYILKAAPMASARLNEALKALPKAESFANSKYYKGGFEPKMTKREASLILGVSQSANRMKIKEAH   93 (125)
Q Consensus        14 ~ii~gl~v~~~~~~~ra~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~eA~~iLgl~~~~~~~~Ik~ay   93 (125)
                      ..+++++|+|++++||+|++||+++..+..++......+  ..+..-........||++||++||||++..++++|.++|
T Consensus         3 R~~aqiIi~G~qvvgrAf~~A~RQeia~s~~aa~~~~a~--k~g~~~~~~~~~~~iTlqEa~qILnV~~~ln~eei~k~y   80 (132)
T KOG3442|consen    3 RYLAQIIIMGSQVVGRAFVQAYRQEIAASQQAAARQAAG--KSGTRSAEANSNGKITLQEAQQILNVKEPLNREEIEKRY   80 (132)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhh--hcCcccccccccccccHHHHhhHhCCCCCCCHHHHHHHH
Confidence            357899999999999999999999877665544332211  011111111223459999999999999999999999999


Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHhhc
Q psy5624          94 KRIITLNHPDRGGSPYLAAKINEAKDLLEQ  123 (125)
Q Consensus        94 r~l~~~~HPDkggs~~~~~~i~~Aye~L~~  123 (125)
                      .+|+..|.|.+|||+|+++||.+|+|+|+.
T Consensus        81 ehLFevNdkskGGSFYLQSKVfRAkErld~  110 (132)
T KOG3442|consen   81 EHLFEVNDKSKGGSFYLQSKVFRAKERLDE  110 (132)
T ss_pred             HHHHhccCcccCcceeehHHHHHHHHHHHH
Confidence            999999999999999999999999999974

>PHA03102 Small T antigen; Reviewed

Probab=99.61  E-value=1.3e-15  Score=110.62  Aligned_cols=54  Identities=28%  Similarity=0.340  Sum_probs=51.8

Q ss_pred             HHHHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSA--NRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~--~~~~Ik~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~~  124 (125)
                      .+|++++|||++++  |.++||++||++++.+|||+||+++.+++||+||++|.++
T Consensus         4 ~~~l~~vLGl~~~A~~s~~eIKkAYr~la~~~HPDkgg~~e~~k~in~Ay~~L~d~   59 (153)
T PHA03102          4 SKELMDLLGLPRSAWGNLPLMRKAYLRKCLEFHPDKGGDEEKMKELNTLYKKFRES   59 (153)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCchhHHHHHHHHHHHHHhhH
Confidence            57999999999999  9999999999999999999999999999999999999874

>COG0484 DnaJ DnaJ-class molecular chaperone with C-terminal Zn finger domain [Posttranslational modification, protein turnover, chaperones]

Probab=99.60  E-value=9.5e-16  Score=124.41  Aligned_cols=55  Identities=36%  Similarity=0.481  Sum_probs=49.7

Q ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhhcC
Q psy5624          70 TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-S---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        70 ~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-s---~~~~~~i~~Aye~L~~~  124 (125)
                      ...+.|+||||+.++|.+|||+|||+|+++||||++. +   .++|++|++|||+|+++
T Consensus         2 ~~~dyYeiLGV~k~As~~EIKkAYRkLA~kyHPD~n~g~~~AeeKFKEI~eAYEVLsD~   60 (371)
T COG0484           2 AKRDYYEILGVSKDASEEEIKKAYRKLAKKYHPDRNPGDKEAEEKFKEINEAYEVLSDP   60 (371)
T ss_pred             CccchhhhcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhCCH
Confidence            3455689999999999999999999999999999986 4   58999999999999985

>smart00271 DnaJ DnaJ molecular chaperone homology domain

Probab=99.57  E-value=6.7e-15  Score=89.99  Aligned_cols=52  Identities=31%  Similarity=0.402  Sum_probs=48.2

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-----CHHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-----SPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-----s~~~~~~i~~Aye~L~~~  124 (125)
                      ++|+||||+++++.++|+++|+++++.+|||+++     ..+.+.+|++||++|.++
T Consensus         2 ~~y~vLgl~~~~~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~~~~~l~~Ay~~L~~~   58 (60)
T smart00271        2 DYYEILGVPRDASLDEIKKAYRKLALKYHPDKNPGDKEEAEEKFKEINEAYEVLSDP   58 (60)
T ss_pred             CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHHHcCC
Confidence            4689999999999999999999999999999987     458999999999999876

>cd06257 DnaJ DnaJ domain or J-domain

Probab=99.56  E-value=8.2e-15  Score=88.04  Aligned_cols=50  Identities=32%  Similarity=0.393  Sum_probs=46.5

Q ss_pred             HHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhc
Q psy5624          74 ASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQ  123 (125)
Q Consensus        74 A~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~  123 (125)
                      .|++|||+++++.++|+++|++|++.+|||++++    ...+.+|++||++|.+
T Consensus         2 ~y~vLgl~~~~~~~~ik~~y~~l~~~~HPD~~~~~~~~~~~~~~l~~Ay~~L~d   55 (55)
T cd06257           2 YYDILGVPPDASDEEIKKAYRKLALKYHPDKNPDDPEAEEKFKEINEAYEVLSD   55 (55)
T ss_pred             hHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcC
Confidence            6799999999999999999999999999999874    6899999999999974

DnaJ/Hsp40 (heat shock protein 40) proteins are highly conserved and play crucial roles in protein translation, folding, unfolding, translocation, and degradation. They act primarily by stimulating the ATPase activity of Hsp70s, an important chaperonine family. Hsp40 proteins are characterized by the presence of a J domain, which mediates the interaction with Hsp70. They may contain other domains as well, and the architectures provide a means of classification.

>PTZ00037 DnaJ_C chaperone protein; Provisional

Probab=99.55  E-value=9.7e-15  Score=120.66  Aligned_cols=60  Identities=23%  Similarity=0.427  Sum_probs=55.4

Q ss_pred             CCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q psy5624          65 FEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        65 ~~~~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~~  124 (125)
                      ....|...+.|+||||++++|.+|||+|||+|++++|||++++++.|++|++||++|.+.
T Consensus        21 ~~~~~~~~d~Y~vLGV~~~As~~eIKkAYrkla~k~HPDk~~~~e~F~~i~~AYevLsD~   80 (421)
T PTZ00037         21 RKREVDNEKLYEVLNLSKDCTTSEIKKAYRKLAIKHHPDKGGDPEKFKEISRAYEVLSDP   80 (421)
T ss_pred             ccccccchhHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCchHHHHHHHHHHHHHhccH
Confidence            445666789999999999999999999999999999999999999999999999999874

>KOG0713|consensus

Probab=99.49  E-value=3e-14  Score=113.80  Aligned_cols=53  Identities=28%  Similarity=0.414  Sum_probs=48.1

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      ++-|+||||+.+++..|||+|||+|++++|||||.+    .+.|++|+.|||+|+++
T Consensus        16 rDfYelLgV~k~Asd~eIKkAYRKLALk~HPDkNpddp~A~e~F~~in~AYEVLsDp   72 (336)
T KOG0713|consen   16 RDFYELLGVPKNASDQEIKKAYRKLALKYHPDKNPDDPNANEKFKEINAAYEVLSDP   72 (336)
T ss_pred             CCHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCCHHHHHHHHHHHHHHHHhcCH
Confidence            455699999999999999999999999999999864    38999999999999974

>PF00226 DnaJ: DnaJ domain; InterPro: IPR001623 The prokaryotic heat shock protein DnaJ interacts with the chaperone hsp70-like DnaK protein []

Probab=99.49  E-value=1.4e-13  Score=85.36  Aligned_cols=52  Identities=35%  Similarity=0.505  Sum_probs=47.4

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCC-CCCH----HHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDR-GGSP----YLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDk-ggs~----~~~~~i~~Aye~L~~~  124 (125)
                      ++|+||||+++++.++|+++|+++++.+|||+ .++.    +.+..|++||++|.+.
T Consensus         1 ~~y~iLgl~~~~~~~eik~~y~~l~~~~HPD~~~~~~~~~~~~~~~i~~Ay~~L~~~   57 (64)
T PF00226_consen    1 NPYEILGLPPDASDEEIKKAYRRLSKQYHPDKNSGDEAEAEEKFARINEAYEILSDP   57 (64)
T ss_dssp             HHHHHCTSTTTSSHHHHHHHHHHHHHHTSTTTGTSTHHHHHHHHHHHHHHHHHHHSH
T ss_pred             ChHHHCCCCCCCCHHHHHHHHHhhhhccccccchhhhhhhhHHHHHHHHHHHHhCCH
Confidence            47899999999999999999999999999999 4556    7999999999999863

Structurally, the DnaJ protein consists of an N-terminal conserved domain (called 'J' domain) of about 70 amino acids, a glycine-rich region ('G' domain') of about 30 residues, a central domain containing four repeats of a CXXCXGXG motif ('CRR' domain) and a C-terminal region of 120 to 170 residues. Such a structure is shown in the following schematic representation: +------------+-+-------+-----+-----------+--------------------------------+ | N-terminal | | Gly-R | | CXXCXGXG | C-terminal | +------------+-+-------+-----+-----------+--------------------------------+ It is thought that the 'J' domain of DnaJ mediates the interaction with the dnaK protein and consists of four helices, the second of which has a charged surface that includes at least one pair of basic residues that are essential for interaction with the ATPase domain of Hsp70. The J- and CRR-domains are found in many prokaryotic and eukaryotic proteins [], either together or separately. In yeast, J-domains have been classified into 3 groups; the class III proteins are functionally distinct and do not appear to act as molecular chaperones []. ; GO: 0031072 heat shock protein binding; PDB: 2GUZ_C 2L6L_A 1HDJ_A 2EJ7_A 1FPO_C 2CUG_A 2QSA_A 2OCH_A 3BVO_B 3APQ_A ....

>PRK14296 chaperone protein DnaJ; Provisional

Probab=99.45  E-value=9e-14  Score=113.25  Aligned_cols=56  Identities=32%  Similarity=0.469  Sum_probs=49.9

Q ss_pred             CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHhhcC
Q psy5624          69 MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG---SPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        69 m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg---s~~~~~~i~~Aye~L~~~  124 (125)
                      |+..+.|+||||+++++.+|||++||+|++++|||++.   ..+.|++|++|||+|+++
T Consensus         1 m~~~dyY~~Lgv~~~a~~~eik~ayrkla~~~HPD~n~~~~a~~~F~~i~~AyevLsD~   59 (372)
T PRK14296          1 MKKKDYYEVLGVSKTASEQEIRQAYRKLAKQYHPDLNKSPDAHDKMVEINEAADVLLDK   59 (372)
T ss_pred             CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHhcCH
Confidence            44457789999999999999999999999999999974   348899999999999875

>PRK09430 djlA Dna-J like membrane chaperone protein; Provisional

Probab=99.43  E-value=4.1e-13  Score=105.22  Aligned_cols=58  Identities=33%  Similarity=0.507  Sum_probs=52.1

Q ss_pred             CCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCC---C-CH-------HHHHHHHHHHHHhhcC
Q psy5624          67 PKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRG---G-SP-------YLAAKINEAKDLLEQS  124 (125)
Q Consensus        67 ~~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkg---g-s~-------~~~~~i~~Aye~L~~~  124 (125)
                      ..++.++||++|||++++|.++||++||+|++++|||+.   | ++       +.+++|++||++|++.
T Consensus       195 ~~~~~~~ay~vLgv~~~as~~eIk~aYr~L~~~~HPDk~~~~g~~~~~~~~a~ek~~~I~~AYe~L~~~  263 (267)
T PRK09430        195 RGPTLEDAYKVLGVSESDDDQEIKRAYRKLMSEHHPDKLVAKGLPPEMMEMAKEKAQEIQAAYELIKKQ  263 (267)
T ss_pred             CCCcHHhHHHHcCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCCChhhHHHHHHHHHHHHHHHHHHHHh
Confidence            368999999999999999999999999999999999993   2 22       6899999999999875

>PRK14299 chaperone protein DnaJ; Provisional

Probab=99.41  E-value=2.5e-13  Score=107.31  Aligned_cols=56  Identities=34%  Similarity=0.427  Sum_probs=50.0

Q ss_pred             CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          69 MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        69 m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      |+..+.|+||||++++|.+|||++||+|++++|||++.+   .+.|++|++||++|+++
T Consensus         1 m~~~d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~   59 (291)
T PRK14299          1 MAYKDYYAILGVPKNASQDEIKKAFKKLARKYHPDVNKSPGAEEKFKEINEAYTVLSDP   59 (291)
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhcCH
Confidence            344578899999999999999999999999999999864   47899999999999874

>PRK14288 chaperone protein DnaJ; Provisional

Probab=99.41  E-value=2.2e-13  Score=110.86  Aligned_cols=53  Identities=28%  Similarity=0.321  Sum_probs=47.9

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-S---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-s---~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|+||||++++|.+|||+|||+|++++|||++. +   .+.|++|++|||+|.++
T Consensus         3 ~dyY~vLgv~~~As~~eIkkayrkla~k~HPD~~~~~~~a~~~f~~i~~AYevLsd~   59 (369)
T PRK14288          3 LSYYEILEVEKHSNQETIKKSYRKLALKYHPDRNAGDKEAEEKFKLINEAYGVLSDE   59 (369)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHHhccH
Confidence            35679999999999999999999999999999975 3   47899999999999875

>PRK14286 chaperone protein DnaJ; Provisional

Probab=99.40  E-value=2.2e-13  Score=110.93  Aligned_cols=56  Identities=34%  Similarity=0.435  Sum_probs=49.8

Q ss_pred             CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhhcC
Q psy5624          69 MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-S---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        69 m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-s---~~~~~~i~~Aye~L~~~  124 (125)
                      |+..+.|+||||+++++.+|||++||+|++++|||++. +   .+.|++|++|||+|+++
T Consensus         1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~   60 (372)
T PRK14286          1 MSERSYYDILGVSKSANDEEIKSAYRKLAIKYHPDKNKGNKESEEKFKEATEAYEILRDP   60 (372)
T ss_pred             CCCCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhccH
Confidence            34457889999999999999999999999999999975 2   47999999999999874

>PRK14287 chaperone protein DnaJ; Provisional

Probab=99.39  E-value=4.1e-13  Score=109.36  Aligned_cols=54  Identities=28%  Similarity=0.378  Sum_probs=48.8

Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      ..+.|+||||+++++.+|||++||+|++++|||++.+   .+.|++|++|||+|.++
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~~~~f~~i~~Ay~~L~d~   59 (371)
T PRK14287          3 KRDYYEVLGVDRNASVDEVKKAYRKLARKYHPDVNKAPDAEDKFKEVKEAYDTLSDP   59 (371)
T ss_pred             CCCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCcH
Confidence            3577899999999999999999999999999999754   36899999999999875

>PRK14279 chaperone protein DnaJ; Provisional

Probab=99.38  E-value=5.4e-13  Score=109.36  Aligned_cols=53  Identities=28%  Similarity=0.355  Sum_probs=48.8

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-S---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-s---~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|+||||+++++.+|||++||+|++++|||+++ +   .+.|++|++||++|.++
T Consensus         9 ~Dyy~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vLsD~   65 (392)
T PRK14279          9 KDFYKELGVSSDASAEEIKKAYRKLARELHPDANPGDPAAEERFKAVSEAHDVLSDP   65 (392)
T ss_pred             cCHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhcch
Confidence            57789999999999999999999999999999975 3   48899999999999985

>PRK14282 chaperone protein DnaJ; Provisional

Probab=99.37  E-value=6.4e-13  Score=108.05  Aligned_cols=54  Identities=37%  Similarity=0.471  Sum_probs=48.5

Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-----~~~~~~i~~Aye~L~~~  124 (125)
                      ..+.|+||||+++++.+|||+|||+|++++|||++..     .+.|++|++|||+|++.
T Consensus         3 ~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~vL~d~   61 (369)
T PRK14282          3 KKDYYEILGVSRNATQEEIKRAYKRLVKEWHPDRHPENRKEAEQKFKEIQEAYEVLSDP   61 (369)
T ss_pred             CCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCccchhHHHHHHHHHHHHHHHhcCh
Confidence            3567899999999999999999999999999999742     37899999999999875

>PRK10767 chaperone protein DnaJ; Provisional

Probab=99.36  E-value=6.7e-13  Score=107.91  Aligned_cols=55  Identities=33%  Similarity=0.450  Sum_probs=49.0

Q ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhhcC
Q psy5624          70 TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-S---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        70 ~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-s---~~~~~~i~~Aye~L~~~  124 (125)
                      ...+.|+||||+++++.+|||++||+|++++|||+++ +   .+.|++|++||++|.+.
T Consensus         2 ~~~d~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~   60 (371)
T PRK10767          2 AKRDYYEVLGVSRNASEDEIKKAYRKLAMKYHPDRNPGDKEAEEKFKEIKEAYEVLSDP   60 (371)
T ss_pred             CCCChHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcHHHHHHHHHHHHHHHHhcch
Confidence            3457889999999999999999999999999999975 3   36899999999999874

>PRK14285 chaperone protein DnaJ; Provisional

Probab=99.36  E-value=8e-13  Score=107.44  Aligned_cols=53  Identities=30%  Similarity=0.433  Sum_probs=48.1

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|+||||+++++.+|||++||+|++++|||++++    .+.|++|++||++|.+.
T Consensus         3 ~d~y~iLgv~~~a~~~eIk~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~   59 (365)
T PRK14285          3 RDYYEILGLSKGASKDEIKKAYRKIAIKYHPDKNKGNKEAESIFKEATEAYEVLIDD   59 (365)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHcCc
Confidence            467899999999999999999999999999999753    37899999999999975

>PRK14276 chaperone protein DnaJ; Provisional

Probab=99.36  E-value=7.6e-13  Score=108.04  Aligned_cols=54  Identities=28%  Similarity=0.309  Sum_probs=49.0

Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      .++.|+||||++++|.+||+++||+|++++|||++.+   .+.|++|++||++|.+.
T Consensus         3 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~   59 (380)
T PRK14276          3 NTEYYDRLGVSKDASQDEIKKAYRKLSKKYHPDINKEPGAEEKYKEVQEAYETLSDP   59 (380)
T ss_pred             CCCHHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhcCH
Confidence            3577899999999999999999999999999999754   57899999999999874

>PRK14280 chaperone protein DnaJ; Provisional

Probab=99.35  E-value=8.3e-13  Score=107.66  Aligned_cols=55  Identities=33%  Similarity=0.428  Sum_probs=49.3

Q ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          70 TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        70 ~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      ...+.|+||||+++++.+|||++||+|++++|||++.+   .+.|++|++||++|++.
T Consensus         2 ~~~~~y~iLgv~~~a~~~eik~ayr~la~~~HpD~~~~~~a~~~f~~i~~Ay~vL~d~   59 (376)
T PRK14280          2 AKRDYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDD   59 (376)
T ss_pred             CCCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhccH
Confidence            33578899999999999999999999999999999753   58999999999999874

>PRK14294 chaperone protein DnaJ; Provisional

Probab=99.35  E-value=9.1e-13  Score=107.06  Aligned_cols=56  Identities=32%  Similarity=0.461  Sum_probs=49.9

Q ss_pred             CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          69 MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        69 m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      |...+.|+||||+++++.+||+++||+|++++|||++++    .+.|++|++||++|.+.
T Consensus         1 ~~~~d~y~~lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~~f~~~~~Ay~vL~d~   60 (366)
T PRK14294          1 MVKRDYYEILGVTRDASEEEIKKSYRKLAMKYHPDRNPGDKEAEELFKEAAEAYEVLSDP   60 (366)
T ss_pred             CCCCChHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHhccH
Confidence            444678899999999999999999999999999999763    37899999999999874

>KOG0712|consensus

Probab=99.35  E-value=7.5e-13  Score=106.39  Aligned_cols=50  Identities=30%  Similarity=0.401  Sum_probs=47.1

Q ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-HHHHHHHHHHHHhhcC
Q psy5624          75 SLILGVSQSANRMKIKEAHKRIITLNHPDRGGSP-YLAAKINEAKDLLEQS  124 (125)
Q Consensus        75 ~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs~-~~~~~i~~Aye~L~~~  124 (125)
                      |+||||+++++.+|||++||+|+++|||||+.+. ++|++|.+|||+|+++
T Consensus         7 y~il~v~~~As~~eikkayrkla~k~HpDkn~~~~ekfkei~~AyevLsd~   57 (337)
T KOG0712|consen    7 YDILGVSPDASEEEIKKAYRKLALKYHPDKNPDAGEKFKEISQAYEVLSDP   57 (337)
T ss_pred             ceeeccCCCcCHHHHHHHHHHHHHHhCCCCCccHHHHHHHHHHHHHHhcCH
Confidence            5899999999999999999999999999998765 9999999999999984

>PRK14301 chaperone protein DnaJ; Provisional

Probab=99.34  E-value=1.1e-12  Score=106.95  Aligned_cols=55  Identities=29%  Similarity=0.417  Sum_probs=49.0

Q ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          70 TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        70 ~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      +..+.|+||||+++++.++||+|||+|++++|||++.+    .+.|++|++||++|.++
T Consensus         2 ~~~~~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~   60 (373)
T PRK14301          2 SQRDYYEVLGVSRDASEDEIKKAYRKLALQYHPDRNPDNPEAEQKFKEAAEAYEVLRDA   60 (373)
T ss_pred             CCCChHHhcCCCCCCCHHHHHHHHHHHHHHhCCCcCCCChHHHHHHHHHHHHHHHhcch
Confidence            34577899999999999999999999999999999753    36899999999999875

>PHA02624 large T antigen; Provisional

Probab=99.34  E-value=2.3e-12  Score=110.38  Aligned_cols=54  Identities=26%  Similarity=0.357  Sum_probs=51.4

Q ss_pred             HHHHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSA--NRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~--~~~~Ik~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~~  124 (125)
                      .+++|++|||++++  +.++||++||++++++|||+||+++.|++|++||++|.+.
T Consensus        10 ~~elyelLGL~~~A~gs~~eIKkAYRkLAkkyHPDKgGdeekfk~Ln~AYevL~d~   65 (647)
T PHA02624         10 SKELMDLLGLPMAAWGNLPLMRKAYLRKCKEYHPDKGGDEEKMKRLNSLYKKLQEG   65 (647)
T ss_pred             HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCcHHHHHHHHHHHHHHhcH
Confidence            46899999999999  9999999999999999999999999999999999999863

>KOG0721|consensus

Probab=99.34  E-value=1.6e-12  Score=98.75  Aligned_cols=55  Identities=31%  Similarity=0.414  Sum_probs=50.4

Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCC----CCCHHHHHHHHHHHHHhhcCC
Q psy5624          71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDR----GGSPYLAAKINEAKDLLEQSK  125 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDk----ggs~~~~~~i~~Aye~L~~~k  125 (125)
                      .-+.++||||+++++..|||++||+|.+++||||    +|+.+.+..|+.||+.|.+.+
T Consensus        98 ~fDPyEILGl~pgas~~eIKkaYR~LSik~HPDK~~~~~~~e~~~~~I~KAY~aLTD~~  156 (230)
T KOG0721|consen   98 KFDPYEILGLDPGASEKEIKKAYRRLSIKYHPDKQPPEEGDEEFFEAIAKAYQALTDKK  156 (230)
T ss_pred             cCCcHHhhCCCCCCCHHHHHHHHHHhhhhhCCCcCCCcchhHHHHHHHHHHHHHhcchh
Confidence            3467899999999999999999999999999999    678899999999999998754

>PRK14283 chaperone protein DnaJ; Provisional

Probab=99.34  E-value=1.2e-12  Score=106.77  Aligned_cols=54  Identities=30%  Similarity=0.428  Sum_probs=48.9

Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG---SPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg---s~~~~~~i~~Aye~L~~~  124 (125)
                      ..+.|++|||+++++.+|||++||+|++++|||++.   ..+.|++|++|||+|.+.
T Consensus         4 ~~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~~Lsd~   60 (378)
T PRK14283          4 KRDYYEVLGVDRNADKKEIKKAYRKLARKYHPDVSEEEGAEEKFKEISEAYAVLSDD   60 (378)
T ss_pred             cCChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhchh
Confidence            346789999999999999999999999999999974   458999999999999875

>PRK14298 chaperone protein DnaJ; Provisional

Probab=99.33  E-value=1.5e-12  Score=106.26  Aligned_cols=53  Identities=30%  Similarity=0.397  Sum_probs=48.4

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|+||||+++++.+||+++||+|++++|||++.+   .+.|++|++||++|.+.
T Consensus         5 ~d~y~iLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~   60 (377)
T PRK14298          5 RDYYEILGLSKDASVEDIKKAYRKLAMKYHPDKNKEPDAEEKFKEISEAYAVLSDA   60 (377)
T ss_pred             CCHHHhhCCCCCCCHHHHHHHHHHHHHHhCccccCChhHHHHHHHHHHHHHHhcch
Confidence            477899999999999999999999999999999754   47899999999999875

>PRK14278 chaperone protein DnaJ; Provisional

Probab=99.33  E-value=1.1e-12  Score=107.02  Aligned_cols=52  Identities=27%  Similarity=0.325  Sum_probs=47.7

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSP---YLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs~---~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+++++.+|||++||+|++++|||+++++   +.|++|++|||+|.+.
T Consensus         4 d~y~iLgv~~~a~~~eik~ayr~la~~~hpD~~~~~~a~~~f~~i~~Ay~vL~d~   58 (378)
T PRK14278          4 DYYGLLGVSRNASDAEIKRAYRKLARELHPDVNPDEEAQEKFKEISVAYEVLSDP   58 (378)
T ss_pred             CcceecCCCCCCCHHHHHHHHHHHHHHHCCCCCCcHHHHHHHHHHHHHHHHhchh
Confidence            567999999999999999999999999999998764   5899999999999874

>PRK10266 curved DNA-binding protein CbpA; Provisional

Probab=99.33  E-value=1.7e-12  Score=103.17  Aligned_cols=56  Identities=25%  Similarity=0.342  Sum_probs=49.8

Q ss_pred             CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHhhcC
Q psy5624          69 MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG---SPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        69 m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg---s~~~~~~i~~Aye~L~~~  124 (125)
                      |+..+.|++|||+++++.+|||++||+|++++|||++.   ....|++|++||++|++.
T Consensus         1 ~~~~d~y~~Lgv~~~a~~~eik~ayr~la~k~HPD~~~~~~~~~~f~~i~~Ay~~L~~~   59 (306)
T PRK10266          1 MELKDYYAIMGVKPTDDLKTIKTAYRRLARKYHPDVSKEPDAEARFKEVAEAWEVLSDE   59 (306)
T ss_pred             CCcCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHhhhH
Confidence            33457889999999999999999999999999999975   458999999999999864

>PRK14295 chaperone protein DnaJ; Provisional

Probab=99.32  E-value=2.2e-12  Score=105.66  Aligned_cols=53  Identities=28%  Similarity=0.412  Sum_probs=48.5

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-S---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-s---~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|+||||+++++.+|||+|||+|++++|||++. +   .+.|++|++||++|.+.
T Consensus         9 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~   65 (389)
T PRK14295          9 KDYYKVLGVPKDATEAEIKKAYRKLAREYHPDANKGDAKAEERFKEISEAYDVLSDE   65 (389)
T ss_pred             cCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchhHHHHHHHHHHHHHHHCch
Confidence            57889999999999999999999999999999975 2   47999999999999875

>PRK14297 chaperone protein DnaJ; Provisional

Probab=99.32  E-value=1.7e-12  Score=105.90  Aligned_cols=53  Identities=26%  Similarity=0.411  Sum_probs=48.2

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|+||||+++++.+||+++||+|++++|||++.+    .+.|++|++||++|.++
T Consensus         4 ~d~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~   60 (380)
T PRK14297          4 KDYYEVLGLEKGASDDEIKKAFRKLAIKYHPDKNKGNKEAEEKFKEINEAYQVLSDP   60 (380)
T ss_pred             CChHHhhCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHhcCH
Confidence            467899999999999999999999999999999753    37899999999999875

>PRK14281 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=2.8e-12  Score=105.27  Aligned_cols=53  Identities=32%  Similarity=0.470  Sum_probs=48.2

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|+||||+++++.+|||++||+|++++|||++++    .+.|++|++|||+|.+.
T Consensus         3 ~d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~   59 (397)
T PRK14281          3 RDYYEVLGVSRSADKDEIKKAYRKLALKYHPDKNPDNKEAEEHFKEVNEAYEVLSND   59 (397)
T ss_pred             CChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhhhh
Confidence            367899999999999999999999999999999763    47899999999999874

>PRK14277 chaperone protein DnaJ; Provisional

Probab=99.31  E-value=2.1e-12  Score=105.66  Aligned_cols=53  Identities=32%  Similarity=0.434  Sum_probs=48.1

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-S---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-s---~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|+||||+++++.+||+++||+|++++|||++. +   .+.|++|++|||+|++.
T Consensus         5 ~d~y~~Lgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~   61 (386)
T PRK14277          5 KDYYEILGVDRNATEEEIKKAYRRLAKKYHPDLNPGDKEAEQKFKEINEAYEILSDP   61 (386)
T ss_pred             CCHHHhcCCCCCCCHHHHHHHHHHHHHHHCCCcCCCchHHHHHHHHHHHHHHHhCCH
Confidence            46789999999999999999999999999999975 2   36899999999999875

>PRK14291 chaperone protein DnaJ; Provisional

Probab=99.28  E-value=5.5e-12  Score=103.07  Aligned_cols=52  Identities=35%  Similarity=0.416  Sum_probs=47.8

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+++++.++||++||+|++++|||++.+   .+.|++|++||++|++.
T Consensus         4 d~Y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vLsd~   58 (382)
T PRK14291          4 DYYEILGVSRNATQEEIKKAYRRLARKYHPDFNKNPEAEEKFKEINEAYQVLSDP   58 (382)
T ss_pred             CHHHhhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhcCH
Confidence            56799999999999999999999999999999854   57899999999999875

>PRK14300 chaperone protein DnaJ; Provisional

Probab=99.28  E-value=5.5e-12  Score=102.76  Aligned_cols=53  Identities=30%  Similarity=0.418  Sum_probs=47.9

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|+||||++++|.+||+++||+|++++|||++.+   .+.|++|++||++|.+.
T Consensus         3 ~~~y~iLgv~~~as~~eik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~   58 (372)
T PRK14300          3 QDYYQILGVSKTASQADLKKAYLKLAKQYHPDTTDAKDAEKKFKEINAAYDVLKDE   58 (372)
T ss_pred             CChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcCHHHHHHHHHHHHHHhhhH
Confidence            467899999999999999999999999999999753   47899999999999864

>KOG0716|consensus

Probab=99.27  E-value=9.4e-12  Score=97.13  Aligned_cols=56  Identities=25%  Similarity=0.413  Sum_probs=50.8

Q ss_pred             CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          69 MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        69 m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      ....+-|.+||++++++.++||++||+|++++|||++|+    +..|.+||.||++|.+.
T Consensus        28 ~~~~~LYdVLgl~k~at~d~IKKaYR~L~~k~HPD~~gd~P~~~dkf~eIN~Ay~ILsD~   87 (279)
T KOG0716|consen   28 VIRLDLYDVLGLPKTATKDEIKKAYRKLALKYHPDKNGDNPEATDKFKEINTAYAILSDP   87 (279)
T ss_pred             cchhHHHHHhCCCcccchHHHHHHHHHHHHHhCCCcCCCCchhHHHHHHHHHHHHHhcCh
Confidence            346778999999999999999999999999999999875    48999999999999874

>KOG0717|consensus

Probab=99.25  E-value=1e-11  Score=102.71  Aligned_cols=55  Identities=25%  Similarity=0.343  Sum_probs=50.4

Q ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhhcC
Q psy5624          70 TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        70 ~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-----~~~~~~i~~Aye~L~~~  124 (125)
                      .....|+||||..++++++|+++||+|++++|||++++     .+.|+.|+.||++|+++
T Consensus         6 ~~~c~YE~L~v~~~a~d~eik~~YRklALq~HPDknpd~ieeat~~F~~i~aAYeVLSdp   65 (508)
T KOG0717|consen    6 KKRCYYEVLGVERDADDDEIKKNYRKLALQYHPDKNPDRIEEATQQFQLIQAAYEVLSDP   65 (508)
T ss_pred             hhhHHHHHhcccccCCHHHHHHHHHHHHHhhCCCCCCccHHHHHHHHHHHHHHHHHhcCh
Confidence            34678999999999999999999999999999999875     47899999999999986

>TIGR02349 DnaJ_bact chaperone protein DnaJ

Probab=99.25  E-value=8.7e-12  Score=100.73  Aligned_cols=51  Identities=35%  Similarity=0.449  Sum_probs=46.8

Q ss_pred             HHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          74 ASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        74 A~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      .|+||||+++++.++||++||+|++++|||++.+   .+.|++|++||++|++.
T Consensus         2 ~y~~Lgv~~~a~~~~ik~ayr~la~~~HPD~~~~~~~~~~f~~i~~Ay~vL~d~   55 (354)
T TIGR02349         2 YYEILGVSKDASEEEIKKAYRKLAKKYHPDRNKDKEAEEKFKEINEAYEVLSDP   55 (354)
T ss_pred             hHHhCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCccHHHHHHHHHHHHHHhhCh
Confidence            4799999999999999999999999999999853   47899999999999875

This model represents bacterial forms of DnaJ, part of the DnaK-DnaJ-GrpE chaperone system. The three components typically are encoded by consecutive genes. DnaJ homologs occur in many genomes, typically not near DnaK and GrpE-like genes; most such genes are not included by this family. Eukaryotic (mitochondrial and chloroplast) forms are not included in the scope of this family.

>PRK14284 chaperone protein DnaJ; Provisional

Probab=99.24  E-value=9.7e-12  Score=101.88  Aligned_cols=52  Identities=29%  Similarity=0.431  Sum_probs=47.3

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+++++.+|||++||+|++++|||++.+    .+.|++|++||++|.+.
T Consensus         2 d~y~iLgv~~~a~~~eikkayr~la~~~HPD~~~~~~~a~~~f~~i~~Ay~vL~d~   57 (391)
T PRK14284          2 DYYTILGVSKTASPEEIKKAYRKLAVKYHPDKNPGDAEAEKRFKEVSEAYEVLSDA   57 (391)
T ss_pred             CHHHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchHHHHHHHHHHHHHHHhcCH
Confidence            45799999999999999999999999999999763    47899999999999874

>PRK14292 chaperone protein DnaJ; Provisional

Probab=99.24  E-value=1.4e-11  Score=100.20  Aligned_cols=52  Identities=35%  Similarity=0.436  Sum_probs=47.8

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+++++.++|+++||+|++++|||++++   .+.|++|++||++|.+.
T Consensus         3 d~y~~Lgv~~~a~~~~ik~ayr~l~~~~hpD~~~~~~a~~~~~~i~~Ay~vL~d~   57 (371)
T PRK14292          3 DYYELLGVSRTASADEIKSAYRKLALKYHPDRNKEKGAAEKFAQINEAYAVLSDA   57 (371)
T ss_pred             ChHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCChhHHHHHHHHHHHHHHhcch
Confidence            46899999999999999999999999999999865   47899999999999875

>PRK14290 chaperone protein DnaJ; Provisional

Probab=99.23  E-value=1.1e-11  Score=100.67  Aligned_cols=52  Identities=29%  Similarity=0.363  Sum_probs=47.3

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-----~~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+++++.+||+++||+|++++|||++.+     .+.|++|++||++|++.
T Consensus         4 d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~~~a~~~f~~i~~Ay~~L~d~   60 (365)
T PRK14290          4 DYYKILGVDRNASQEDIKKAFRELAKKWHPDLHPGNKAEAEEKFKEISEAYEVLSDP   60 (365)
T ss_pred             ChhhhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHHHHHHHHHHHHHHHhcCh
Confidence            56799999999999999999999999999999753     27899999999999874

>PRK14289 chaperone protein DnaJ; Provisional

Probab=99.23  E-value=1.1e-11  Score=101.31  Aligned_cols=54  Identities=31%  Similarity=0.377  Sum_probs=48.6

Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-C---HHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-S---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-s---~~~~~~i~~Aye~L~~~  124 (125)
                      ..+.|++|||+++++.+||+++||+|++++|||++. +   .+.|++|++||++|.+.
T Consensus         4 ~~~~y~~Lgv~~~a~~~eik~ayr~la~~~HpD~~~~~~~a~~~f~~i~~Ay~~L~d~   61 (386)
T PRK14289          4 KRDYYEVLGVSKTATVDEIKKAYRKKAIQYHPDKNPGDKEAEEKFKEAAEAYDVLSDP   61 (386)
T ss_pred             cCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCChHHHHHHHHHHHHHHHhcCH
Confidence            357789999999999999999999999999999975 3   37899999999999874

>KOG0718|consensus

Probab=99.18  E-value=4.5e-11  Score=99.24  Aligned_cols=56  Identities=27%  Similarity=0.405  Sum_probs=50.5

Q ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-------HHHHHHHHHHHHhhcCC
Q psy5624          70 TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSP-------YLAAKINEAKDLLEQSK  125 (125)
Q Consensus        70 ~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs~-------~~~~~i~~Aye~L~~~k  125 (125)
                      ...|-|.+|||++++|.+||+++||++++.+||||.-|+       +.|++|.+|||+|+|++
T Consensus         7 ~e~e~Ya~LNlpkdAt~eeI~~AYrr~~~lfHPDkh~dpd~K~~AE~~F~~i~~AyEVLsDp~   69 (546)
T KOG0718|consen    7 DEIELYALLNLPKDATDEEIKKAYRRLSRLFHPDKHTDPDQKKAAEEKFQRIQRAYEVLSDPQ   69 (546)
T ss_pred             chhhHHHHhCCCcccCHHHHHHHHHHHHHhcCCcccCChhHHHHHHHHHHHHHHHHHHhcChH
Confidence            345889999999999999999999999999999997654       68999999999999863

>PRK14293 chaperone protein DnaJ; Provisional

Probab=99.17  E-value=3.6e-11  Score=98.03  Aligned_cols=52  Identities=31%  Similarity=0.406  Sum_probs=47.5

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+++++.++|+++||+|++++|||++.+   .+.|++|++||++|.+.
T Consensus         4 d~y~vLgv~~~a~~~eik~ayr~la~~~HPD~~~~~~a~~~f~~i~~Ay~vL~~~   58 (374)
T PRK14293          4 DYYEILGVSRDADKDELKRAYRRLARKYHPDVNKEPGAEDRFKEINRAYEVLSDP   58 (374)
T ss_pred             ChhhhcCCCCCCCHHHHHHHHHHHHHHHCCCCCCCcCHHHHHHHHHHHHHHHhch
Confidence            56799999999999999999999999999999753   58899999999999874

>KOG0715|consensus

Probab=99.17  E-value=3.5e-11  Score=95.32  Aligned_cols=58  Identities=28%  Similarity=0.392  Sum_probs=51.1

Q ss_pred             CCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHhhcC
Q psy5624          67 PKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG---SPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        67 ~~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg---s~~~~~~i~~Aye~L~~~  124 (125)
                      ..++.++.|+||||+.+++..|||.+|++|++++|||.+-   ....|++|.+|||+|.+.
T Consensus        38 ~~~~~~d~Y~vLgv~~~At~~EIK~Af~~LaKkyHPD~n~~~~a~~kF~eI~~AYEiLsd~   98 (288)
T KOG0715|consen   38 RIISKEDYYKVLGVSRNATLSEIKSAFRKLAKKYHPDVNKDKEASKKFKEISEAYEILSDE   98 (288)
T ss_pred             ccCCCcchhhhhCcCCCCCHHHHHHHHHHHHHhhCCCCCCCcchhhHHHHHHHHHHHhcCH
Confidence            3444558999999999999999999999999999999864   458999999999999874

>COG2214 CbpA DnaJ-class molecular chaperone [Posttranslational modification, protein turnover, chaperones]

Probab=99.11  E-value=1.7e-10  Score=84.24  Aligned_cols=54  Identities=33%  Similarity=0.423  Sum_probs=48.6

Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CH----HHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-SP----YLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-s~----~~~~~i~~Aye~L~~~  124 (125)
                      ..+.|+||||+++++.+||+++||++++++|||+++ ++    +.|+.|++||++|.+.
T Consensus         5 ~~~~y~iLgv~~~as~~eik~ayrkla~~~HPD~~~~~~~~a~~~f~~i~~Ay~vLsd~   63 (237)
T COG2214           5 LLDYYEILGVPPNASLEEIKKAYRKLALKYHPDRNPGDPKVAEEKFKEINEAYEILSDP   63 (237)
T ss_pred             hhhHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchhHHHHHHHHHHHHHHHhhCH
Confidence            356789999999999999999999999999999965 33    8899999999999874

>KOG0691|consensus

Probab=99.08  E-value=1.7e-10  Score=91.71  Aligned_cols=53  Identities=26%  Similarity=0.406  Sum_probs=48.4

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC-CH---HHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGG-SP---YLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg-s~---~~~~~i~~Aye~L~~~  124 (125)
                      .|.|.|||++++++..+|+++||..++.+|||||. +|   +.|+++.+||++|.+.
T Consensus         5 ~dyY~lLgi~~~at~~eIkKaYr~kaL~~HPDKNp~dP~A~ekFq~L~eAy~VL~D~   61 (296)
T KOG0691|consen    5 TDYYDLLGISEDATDAEIKKAYRKKALQYHPDKNPGDPQAAEKFQELSEAYEVLSDE   61 (296)
T ss_pred             chHHHHhCCCCCCCHHHHHHHHHHHHHhcCCCCCCCChHHHHHHHHHHHHHHHhcCH
Confidence            57789999999999999999999999999999975 44   7899999999999874

>PTZ00341 Ring-infected erythrocyte surface antigen; Provisional

Probab=99.03  E-value=2.5e-10  Score=101.58  Aligned_cols=55  Identities=25%  Similarity=0.178  Sum_probs=49.6

Q ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          70 TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        70 ~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      ...+.|+||||+++++..+||++||+|++++|||++.+   ...|++|++||++|.++
T Consensus       571 ~d~dYYdILGVs~dAS~~EIKKAYRKLAlkyHPDKN~~~~A~ekFq~I~EAYeVLSDp  628 (1136)
T PTZ00341        571 PDTLFYDILGVGVNADMKEISERYFKLAENYYPPKRSGNEGFHKFKKINEAYQILGDI  628 (1136)
T ss_pred             CCCChHHHcCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHhCCH
Confidence            34688999999999999999999999999999999753   47899999999999875

>TIGR03835 termin_org_DnaJ terminal organelle assembly protein TopJ

Probab=99.01  E-value=3.8e-10  Score=98.48  Aligned_cols=52  Identities=35%  Similarity=0.607  Sum_probs=47.1

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH---HHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSP---YLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs~---~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+++++.++||++||+|++++|||++++.   ..|++|++||++|++.
T Consensus         3 DYYeVLGVs~dAS~eEIKKAYRKLAKKyHPDKn~~~eAeekFqeINEAYEVLSDP   57 (871)
T TIGR03835         3 DYYEVLGIDRDADEQEIKKAFRKLAKKYHPDRNKAPDAASIFAEINEANDVLSNP   57 (871)
T ss_pred             ChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHhCCH
Confidence            567999999999999999999999999999997653   5789999999999874

This model describes TopJ (MG_200, CbpA), a DnaJ homolog and probable assembly protein of the Mycoplasma terminal organelle. The terminal organelle is involved in both cytadherence and gliding motility.

>PRK01356 hscB co-chaperone HscB; Provisional

Probab=98.97  E-value=1.2e-09  Score=80.42  Aligned_cols=52  Identities=19%  Similarity=0.291  Sum_probs=44.5

Q ss_pred             HHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCH-------HHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQS--ANRMKIKEAHKRIITLNHPDRGGSP-------YLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~--~~~~~Ik~ayr~l~~~~HPDkggs~-------~~~~~i~~Aye~L~~~  124 (125)
                      +.|++|||+++  ++..+|+++||++.+++|||+..+.       ..+..||+||++|+++
T Consensus         3 ~yf~llgl~~~f~id~~~L~~aYr~lq~~~HPDk~~~~~~k~~~~~~s~~in~AY~~L~dp   63 (166)
T PRK01356          3 NYFQLLGLPQEYNIDLKILEKQYFAMQVKYHPDKAKTLQEKEQNLIIASELNNAYSTLKDA   63 (166)
T ss_pred             CHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHHHHHHHhCCH
Confidence            35799999987  7899999999999999999996543       2357999999999875

>PRK05014 hscB co-chaperone HscB; Provisional

Probab=98.97  E-value=1.2e-09  Score=80.62  Aligned_cols=51  Identities=22%  Similarity=0.260  Sum_probs=43.5

Q ss_pred             HHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCC--CH-------HHHHHHHHHHHHhhcC
Q psy5624          74 ASLILGVSQS--ANRMKIKEAHKRIITLNHPDRGG--SP-------YLAAKINEAKDLLEQS  124 (125)
Q Consensus        74 A~~iLgl~~~--~~~~~Ik~ayr~l~~~~HPDkgg--s~-------~~~~~i~~Aye~L~~~  124 (125)
                      .|++|||++.  ++..+|+++||++.+++|||+..  ++       ..+..||+||++|+++
T Consensus         3 yf~llgl~~~~~~d~~~L~~~yr~l~~~~HPDk~~~~~~~~~~~a~~~s~~iN~AY~~L~dp   64 (171)
T PRK05014          3 YFTLFGLPARYDIDTQLLASRYQELQRQFHPDKFANASERERLLAVQQAATINDAYQTLKHP   64 (171)
T ss_pred             HHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHCCh
Confidence            5799999996  68899999999999999999943  22       3567899999999875

>KOG0722|consensus

Probab=98.93  E-value=7.3e-10  Score=86.46  Aligned_cols=53  Identities=30%  Similarity=0.480  Sum_probs=49.0

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      +++|++|||+.+++..||.++||+|++++|||++.+   ..+|.+|..|||+|.++
T Consensus        33 enCYdVLgV~Rea~KseIakAYRqLARrhHPDr~r~~e~k~~F~~iAtayeilkd~   88 (329)
T KOG0722|consen   33 ENCYDVLGVAREANKSEIAKAYRQLARRHHPDRNRDPESKKLFVKIATAYEILKDN   88 (329)
T ss_pred             hhHHHHhhhhhhccHHHHHHHHHHHHHHhCCcccCCchhhhhhhhhhcccccccch
Confidence            899999999999999999999999999999999654   47899999999999875

>KOG0719|consensus

Probab=98.91  E-value=1.5e-09  Score=83.48  Aligned_cols=51  Identities=22%  Similarity=0.358  Sum_probs=47.1

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC------CHHHHHHHHHHHHHhhc
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGG------SPYLAAKINEAKDLLEQ  123 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg------s~~~~~~i~~Aye~L~~  123 (125)
                      +.|+||||..+++..+|+++|++|.+++|||++.      ..+.|+.++.||.+|.+
T Consensus        15 d~YevLGVer~a~~~eIrkAY~klal~~HPDk~~eed~~ea~~kFq~l~k~y~iLsD   71 (264)
T KOG0719|consen   15 DLYEVLGVERDATDKEIRKAYHKLALRLHPDKNHEEDKVEATEKFQQLQKAYQILSD   71 (264)
T ss_pred             CHHHHhhhcccCCHHHHHHHHHHHHHHhCCCcchhhhHHHHHHHHHHHHHHHHHhhH
Confidence            7899999999999999999999999999999973      35789999999999965

>PRK03578 hscB co-chaperone HscB; Provisional

Probab=98.89  E-value=3e-09  Score=78.94  Aligned_cols=53  Identities=21%  Similarity=0.302  Sum_probs=44.5

Q ss_pred             HHHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCC--CH-------HHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQS--ANRMKIKEAHKRIITLNHPDRGG--SP-------YLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~--~~~~~Ik~ayr~l~~~~HPDkgg--s~-------~~~~~i~~Aye~L~~~  124 (125)
                      .+.|++|||+++  .+..+|+++||+|.+++|||+..  +.       ..++.||+||++|+++
T Consensus         6 ~dyf~llglp~~f~~d~~~L~~~yr~lq~~~HPD~~~~~~~~e~~~a~~~s~~iN~AY~tL~~p   69 (176)
T PRK03578          6 DDHFSLFGLPARFALDEAALDAAYRTVQAQVHPDRFAAAGDAEKRVAMQWATRANEAYQTLRDP   69 (176)
T ss_pred             CCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCh
Confidence            467799999986  68899999999999999999953  22       2357999999999875

>PRK00294 hscB co-chaperone HscB; Provisional

Probab=98.88  E-value=3.1e-09  Score=78.70  Aligned_cols=52  Identities=19%  Similarity=0.186  Sum_probs=44.0

Q ss_pred             HHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCC--C-------HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQS--ANRMKIKEAHKRIITLNHPDRGG--S-------PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~--~~~~~Ik~ayr~l~~~~HPDkgg--s-------~~~~~~i~~Aye~L~~~  124 (125)
                      ..+++||+++.  .+..+|+++||+|.+++|||+..  +       ...+..||+||++|+++
T Consensus         5 ~~F~l~~l~~~f~id~~~L~~~Yr~Lq~~~HPDk~~~~~~~e~~~a~~~s~~IN~AY~~L~~p   67 (173)
T PRK00294          5 CHFALFDLQPSFRLDLDQLATRYRELAREVHPDRFADAPEREQRLALERSASLNEAYQTLKSP   67 (173)
T ss_pred             ChhhhcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHhCCh
Confidence            45699999997  67899999999999999999943  2       24578999999999875

>KOG1789|consensus

Probab=98.76  E-value=1.8e-08  Score=90.69  Aligned_cols=57  Identities=25%  Similarity=0.340  Sum_probs=50.2

Q ss_pred             CCCCCHHHHHHHhCCCCC----CCHHHHHHHHHHHHHHhCCCCCCC-HHHHHHHHHHHHHhh
Q psy5624          66 EPKMTKREASLILGVSQS----ANRMKIKEAHKRIITLNHPDRGGS-PYLAAKINEAKDLLE  122 (125)
Q Consensus        66 ~~~m~~~eA~~iLgl~~~----~~~~~Ik~ayr~l~~~~HPDkggs-~~~~~~i~~Aye~L~  122 (125)
                      ...|+.++||+||+++-+    .++++||++|++|+.++|||||.. .+.|.+||.|||.|.
T Consensus      1275 P~~mS~d~A~eiL~i~l~n~~hD~~~KirrqY~kLA~kYHPDKNPEGRemFe~VnKAYE~L~ 1336 (2235)
T KOG1789|consen 1275 PATMSVDLAREILSVDLTNEEHDKPAKIRRQYYKLAAKYHPDKNPEGREMFERVNKAYELLS 1336 (2235)
T ss_pred             CCccchHHHHHHhccccCCCCcccHHHHHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHHHH
Confidence            357899999999999764    355899999999999999999874 589999999999997

>KOG0720|consensus

Probab=98.75  E-value=8e-09  Score=85.73  Aligned_cols=53  Identities=21%  Similarity=0.275  Sum_probs=48.8

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      .+||.+|||+++++.++||+.||+++...||||+-.   .+.|+++..|||+|.++
T Consensus       235 ~daYsvlGl~~d~sd~~lKk~Yrk~A~LVhPDKn~~~~A~Eafk~Lq~Afevig~~  290 (490)
T KOG0720|consen  235 LDAYSALGLPSDCSDADLKKNYRKKAMLVHPDKNMIPRAEEAFKKLQVAFEVIGDS  290 (490)
T ss_pred             CCchhhcCCCCCCCHHHHHHHHHhhceEeCCCccCChhHHHHHHHHHHHHHHhcch
Confidence            479999999999999999999999999999999865   48899999999999764

>PRK01773 hscB co-chaperone HscB; Provisional

Probab=98.56  E-value=1.6e-07  Score=69.54  Aligned_cols=52  Identities=17%  Similarity=0.233  Sum_probs=44.1

Q ss_pred             HHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCC--CCH-------HHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQS--ANRMKIKEAHKRIITLNHPDRG--GSP-------YLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~--~~~~~Ik~ayr~l~~~~HPDkg--gs~-------~~~~~i~~Aye~L~~~  124 (125)
                      +.+++||+++.  .+...++++|++|.+.+|||+-  .++       +....||+||.+|+++
T Consensus         3 nyF~lf~lp~~F~iD~~~L~~~y~~Lq~~~HPD~f~~~~~~eq~~a~~~ss~iN~AY~tLkdP   65 (173)
T PRK01773          3 NPFALFDLPVDFQLDNALLSERYLALQKSLHPDNFANSSAQEQRLAMQKSAEVNDALQILKDP   65 (173)
T ss_pred             ChHHhcCCCCCCCCCHHHHHHHHHHHHHHhCcCcccCCCHHHHHHHHHHHHHHHHHHHHHCCh
Confidence            35689999987  8999999999999999999993  232       4568899999999875

>COG5407 SEC63 Preprotein translocase subunit Sec63 [Intracellular trafficking and secretion]

Probab=98.54  E-value=3e-07  Score=76.80  Aligned_cols=52  Identities=27%  Similarity=0.323  Sum_probs=45.8

Q ss_pred             HHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---------HHHHHHHHHHHHHhhcCC
Q psy5624          74 ASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---------PYLAAKINEAKDLLEQSK  125 (125)
Q Consensus        74 A~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---------~~~~~~i~~Aye~L~~~k  125 (125)
                      .|+|||++.+.+..+||++||+|..++||||-..         .+....|+.||+.|.+.|
T Consensus       100 PyEILGI~~~ts~rdik~~yr~Ls~KfhpdK~~~mvn~~rse~Ee~y~~ItkAY~~lTd~k  160 (610)
T COG5407         100 PYEILGIDQDTSERDIKKRYRMLSMKFHPDKAPPMVNELRSEYEEKYKTITKAYGLLTDKK  160 (610)
T ss_pred             hHHhhcccCCCcHHHHHHHHHhheeecChhhcCCCChhHHHHHHHHHHHHHHHHHhhhhHH
Confidence            5799999999999999999999999999999543         367888999999997643

>KOG0624|consensus

Probab=98.54  E-value=1e-07  Score=77.77  Aligned_cols=53  Identities=28%  Similarity=0.379  Sum_probs=46.8

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-------HHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSP-------YLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs~-------~~~~~i~~Aye~L~~~  124 (125)
                      ++.|+||||..++++.||.++||+++.+||||.--+.       ..|..|..|+|+|.++
T Consensus       394 RDYYKILGVkRnAsKqEI~KAYRKlAqkWHPDNFqdEeEKKkAEKKFIDIAAAKEVLsd~  453 (504)
T KOG0624|consen  394 RDYYKILGVKRNASKQEITKAYRKLAQKWHPDNFQDEEEKKKAEKKFIDIAAAKEVLSDP  453 (504)
T ss_pred             chHHHHhhhcccccHHHHHHHHHHHHHhcCCccccCHHHHHHHHHhhhhHHHHHHhhcCH
Confidence            5677999999999999999999999999999985554       3678899999999874

>KOG1150|consensus

Probab=98.54  E-value=8.6e-08  Score=72.62  Aligned_cols=51  Identities=22%  Similarity=0.309  Sum_probs=44.0

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-----HHHHHHHHHHHHhhc
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSP-----YLAAKINEAKDLLEQ  123 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs~-----~~~~~i~~Aye~L~~  123 (125)
                      ++|++|.+.|+.+.++|+++||+|.+..|||+|.+.     ..|.-|..||..|.+
T Consensus        54 NpfeVLqIdpev~~edikkryRklSilVHPDKN~Dd~~rAqkAFdivkKA~k~l~n  109 (250)
T KOG1150|consen   54 NPFEVLQIDPEVTDEDIKKRYRKLSILVHPDKNPDDAERAQKAFDIVKKAYKLLEN  109 (250)
T ss_pred             ChHHHHhcCCCCCHHHHHHHHHhhheeecCCCCcccHHHHHHHHHHHHHHHHHHhC
Confidence            578999999999999999999999999999999864     345667888887765

>KOG0714|consensus

Probab=98.49  E-value=9.5e-08  Score=72.89  Aligned_cols=53  Identities=32%  Similarity=0.482  Sum_probs=45.7

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-----HHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSP-----YLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs~-----~~~~~i~~Aye~L~~~  124 (125)
                      .+.+.||+|..+++.++|+++|+++++++|||++.+.     ..+.++.+||++|.+.
T Consensus         3 ~d~~~~l~i~~~as~~~i~ka~~~~a~~~hpdk~~~~~~~~~~~~~~~~ea~~~ls~~   60 (306)
T KOG0714|consen    3 KDYYKILGIARSASEEDIKKAYRKLALKYHPDKNPSPKEVAEAKFKEIAEAYEVLSDP   60 (306)
T ss_pred             ccHHHHhCccccccHHHHHHHHHHHHHhhCCCCCCCchhhHHHHHhhhhccccccCCH
Confidence            4678999999999899999999999999999996544     3477888999988764

>KOG0568|consensus

Probab=98.48  E-value=3.1e-07  Score=71.24  Aligned_cols=51  Identities=31%  Similarity=0.409  Sum_probs=46.7

Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHH-Hh
Q psy5624          71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG---SPYLAAKINEAKD-LL  121 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg---s~~~~~~i~~Aye-~L  121 (125)
                      ..|++.||||.++++.++|+.+|..|++++|||.|.   +...|.+|.+||. +|
T Consensus        46 ~~e~fril~v~e~~~adevr~af~~lakq~hpdsgs~~adaa~f~qideafrkvl  100 (342)
T KOG0568|consen   46 IMECFRILGVEEGADADEVREAFHDLAKQVHPDSGSEEADAARFIQIDEAFRKVL  100 (342)
T ss_pred             HHHHHHHhcccccCchhHHHHHHHHHHHHcCCCCCCccccHHHHHHHHHHHHHHH
Confidence            479999999999999999999999999999999975   5689999999998 44

>KOG0550|consensus

Probab=98.42  E-value=2.7e-07  Score=76.32  Aligned_cols=53  Identities=30%  Similarity=0.495  Sum_probs=47.6

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCC-CC----HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRG-GS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkg-gs----~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|.|||+...++.++|+++||++.+.||||++ |+    ..+|++|-+||.+|.+.
T Consensus       373 kd~ykilGi~~~as~~eikkayrk~AL~~Hpd~~agsq~eaE~kFkevgeAy~il~d~  430 (486)
T KOG0550|consen  373 KDWYKILGISRNASDDEIKKAYRKLALVHHPDKNAGSQKEAEAKFKEVGEAYTILSDP  430 (486)
T ss_pred             hhHHHHhhhhhhcccchhhhHHHHHHHHhCCCcCcchhHHHHHHHHHHHHHHHHhcCH
Confidence            4678999999999999999999999999999995 55    36899999999999874

>TIGR00714 hscB Fe-S protein assembly co-chaperone HscB

Probab=98.38  E-value=6.3e-07  Score=65.34  Aligned_cols=41  Identities=20%  Similarity=0.259  Sum_probs=34.8

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCC--CC-------HHHHHHHHHHHHHhhcC
Q psy5624          84 ANRMKIKEAHKRIITLNHPDRG--GS-------PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        84 ~~~~~Ik~ayr~l~~~~HPDkg--gs-------~~~~~~i~~Aye~L~~~  124 (125)
                      .+..+|+++||+|.+++|||+.  .+       ...++.||+||++|+++
T Consensus         3 iD~~~L~~~yr~lq~~~HPD~~~~~~~~~~~~a~~~s~~iN~AY~~L~~p   52 (157)
T TIGR00714         3 LDTQALSLRYQDLQRQYHPDKFASGSAQEQLAAVQQSTTLNQAYQTLKDP   52 (157)
T ss_pred             CCHHHHHHHHHHHHHHHCcCCCCCCChhhhHHHHHHHHHHHHHHHHhCCh
Confidence            4788999999999999999983  22       25678999999999875

This model describes the small subunit, Hsc20 (20K heat shock cognate protein) of a pair of proteins Hsc66-Hsc20, related to the DnaK-DnaJ heat shock proteins, which also serve as molecular chaperones. Hsc20, unlike DnaJ, appears not to have chaperone activity on its own, but to act solely as a regulatory subunit for Hsc66 (i.e., to be a co-chaperone). The gene for Hsc20 in E. coli, hscB, is not induced by heat shock.

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=97.54  E-value=0.0001  Score=54.34  Aligned_cols=50  Identities=30%  Similarity=0.450  Sum_probs=42.9

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCC---CCCH--------HHHHHHHHHHHHh
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDR---GGSP--------YLAAKINEAKDLL  121 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDk---ggs~--------~~~~~i~~Aye~L  121 (125)
                      .+++.+||++...+..+|+++|+.++..+|||+   -|.+        +.++++++||+.+
T Consensus       113 ~~~l~~l~~~~~~~~~~i~~~~r~l~~e~~~d~a~~~~~~~e~~~~~~~~~~~i~~a~~~~  173 (174)
T COG1076         113 EDALKVLGVEIKADQDAIKKAYRKLLSEQHPDKAAAKGLKLEFIEKLKEKLQEIQEAYEDI  173 (174)
T ss_pred             hhHHHHhcCchhhhHHHHHHHHHHHHHhcCHHHHHHhcCCHHHHHHHHHHHHHHHHHHHhc
Confidence            789999999999999999999999999999998   3443        4567788888764

>COG5269 ZUO1 Ribosome-associated chaperone zuotin [Translation, ribosomal structure and biogenesis / Posttranslational modification, protein turnover, chaperones]

Probab=97.40  E-value=0.00031  Score=55.84  Aligned_cols=54  Identities=31%  Similarity=0.476  Sum_probs=46.4

Q ss_pred             HHHHHHhCCCC---CCCHHHHHHHHHHHHHHhCCCC---CC---CHHHHHHHHHHHHHhhcCC
Q psy5624          72 REASLILGVSQ---SANRMKIKEAHKRIITLNHPDR---GG---SPYLAAKINEAKDLLEQSK  125 (125)
Q Consensus        72 ~eA~~iLgl~~---~~~~~~Ik~ayr~l~~~~HPDk---gg---s~~~~~~i~~Aye~L~~~k  125 (125)
                      .+-|.+|||+.   .+++.+|.+++++.+..+|||+   ||   ..+.|.-|..|||+|.+++
T Consensus        43 ~DlYa~lgLskyR~ka~~~qi~kah~kkv~kyHPDk~aa~g~~~~d~fFk~iqkA~evL~D~~  105 (379)
T COG5269          43 VDLYALLGLSKYRTKAIPPQILKAHKKKVYKYHPDKTAAGGNKGCDEFFKLIQKAREVLGDRK  105 (379)
T ss_pred             hhHHHHhchHhhhcCCCcHHHHHHHHHHHHHhCccchhccCCCCcHHHHHHHHHHHHHhccHH
Confidence            56788999976   4788999999999999999998   44   4688999999999998753

>PF13446 RPT: A repeated domain in UCH-protein

Probab=97.19  E-value=0.0022  Score=39.47  Aligned_cols=31  Identities=26%  Similarity=0.281  Sum_probs=29.2

Q ss_pred             CCCHHHHHHHhCCCCCCCHHHHHHHHHHHHH
Q psy5624          68 KMTKREASLILGVSQSANRMKIKEAHKRIIT   98 (125)
Q Consensus        68 ~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~   98 (125)
                      .|+.++||++||++++.+.+.|-..|+....
T Consensus         1 ~~~~~~Ay~~Lgi~~~~~Dd~Ii~~f~~~~~   31 (62)
T PF13446_consen    1 YMDVEEAYEILGIDEDTDDDFIISAFQSKVN   31 (62)
T ss_pred             CCCHHHHHHHhCcCCCCCHHHHHHHHHHHHH
Confidence            3899999999999999999999999999888

>KOG0431|consensus

Probab=96.82  E-value=0.0013  Score=55.35  Aligned_cols=37  Identities=27%  Similarity=0.443  Sum_probs=29.2

Q ss_pred             CCCHHHHHHHHHHHHHHhCCCC-CC---C---HHHHHHHHHHHH
Q psy5624          83 SANRMKIKEAHKRIITLNHPDR-GG---S---PYLAAKINEAKD  119 (125)
Q Consensus        83 ~~~~~~Ik~ayr~l~~~~HPDk-gg---s---~~~~~~i~~Aye  119 (125)
                      -.+.+.||++||+-.+..|||| .+   +   .|++.+|+.++.
T Consensus       399 LVtp~~VKKaYrKA~L~VHPDKlqq~gas~~qK~Iaekvfd~l~  442 (453)
T KOG0431|consen  399 LVTPAQVKKAYRKAVLCVHPDKLQQKGASLEQKYIAEKVFDALS  442 (453)
T ss_pred             ccCHHHHHHHHHhhhheeCcccccCCcccHHHHHHHHHHHHHHH
Confidence            3589999999999999999999 22   2   377777776654

>KOG3192|consensus

Probab=93.57  E-value=0.21  Score=36.69  Aligned_cols=52  Identities=31%  Similarity=0.345  Sum_probs=39.9

Q ss_pred             HHHHHhCCCC--CCCHHHHHHHHHHHHHHhCCCCCCC---------HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQ--SANRMKIKEAHKRIITLNHPDRGGS---------PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~--~~~~~~Ik~ayr~l~~~~HPDkggs---------~~~~~~i~~Aye~L~~~  124 (125)
                      .-+.+||.+.  ..+++.+..-|--..++.|||+-+.         .+...+||+||+.|.++
T Consensus         9 ~ff~~Fg~e~~~~~~p~~l~~~~~~~skkL~~d~~~~~~~~~~d~a~eqSa~lnkAY~TLk~p   71 (168)
T KOG3192|consen    9 RFFDIFGMELSFKIDPDKLKEKYTDISKKLHPDRPGLSFAGDTDQASEQSAELNKAYDTLKDP   71 (168)
T ss_pred             HHHHHhccccCCCCCcchhhHHHHHHHHhhCcccccccccccchhHHHHHHHHHHHHHHHHhH
Confidence            4458887655  4677788878999999999998331         25678899999999874

>COG1076 DjlA DnaJ-domain-containing proteins 1 [Posttranslational modification, protein turnover, chaperones]

Probab=90.30  E-value=0.33  Score=35.64  Aligned_cols=39  Identities=26%  Similarity=0.319  Sum_probs=31.2

Q ss_pred             CHHHHHHHHHHHHHHhCCCCCCCH---------HHHHHHHHHHHHhhc
Q psy5624          85 NRMKIKEAHKRIITLNHPDRGGSP---------YLAAKINEAKDLLEQ  123 (125)
Q Consensus        85 ~~~~Ik~ayr~l~~~~HPDkggs~---------~~~~~i~~Aye~L~~  123 (125)
                      +.+.++..|+.+.+.+|||+.++.         ..+..+|.||..|++
T Consensus        16 ~~~~l~~~~~~~~~~~~~dr~~~~~~~~~~~~l~~~~~~~~a~~tLk~   63 (174)
T COG1076          16 DLDALKLQYRELQRAYHPDRFGKASEAEQRKALQQSAEVNPAYQTLKD   63 (174)
T ss_pred             HHhHhhhhHHHHHHhhCcccccccchHHHHHHHHHHHHhcchHHHHHH
Confidence            457788999999999999996542         346678999988875

>PF14687 DUF4460: Domain of unknown function (DUF4460)

Probab=84.11  E-value=1.5  Score=30.31  Aligned_cols=32  Identities=19%  Similarity=0.200  Sum_probs=23.6

Q ss_pred             CCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHH
Q psy5624          84 ANRMKIKEAHKRIITLNHPDRGGSPYLAAKIN  115 (125)
Q Consensus        84 ~~~~~Ik~ayr~l~~~~HPDkggs~~~~~~i~  115 (125)
                      .+..+++.+-|...++.|||-=++.-..+++|
T Consensus         6 ~~~~~l~~aLr~Fy~~VHPDlF~~~P~~k~~N   37 (112)
T PF14687_consen    6 LSSPDLRSALRPFYFAVHPDLFGQHPEEKQVN   37 (112)
T ss_pred             hhhHHHHHHHHHHHHHhCCcccccChHHHHhh
Confidence            45678999999999999999744332244554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	125
2guz_A	71	Structure Of The Tim14-tim16 Complex Of The Mitocho		2e-16

>pdb|2GUZ|A Chain A, Structure Of The Tim14-tim16 Complex Of The Mitochondrial Protein Import Motor Length = 71

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 35/65 (53%), Positives = 50/65 (76%), Gaps = 1/65 (1%)
Query: 60  YYKGGFEPKMTKREASLILGVSQSA-NRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAK 118
           + KGGF+PKM  +EA  IL ++++   + K+KE H++I+  NHPD+GGSP+LA KINEAK
Sbjct: 2   FLKGGFDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAK 61
Query: 119 DLLEQ 123
           D LE+
Sbjct: 62  DFLEK 66

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	125
2guz_A	71	Mitochondrial import inner membrane translocase su	6e-30
2guz_B	65	Mitochondrial import inner membrane translocase su	5e-18
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	2e-07
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	1e-06
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	2e-06
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	9e-05
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	3e-04
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	5e-04
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	6e-04

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 71

 Score =  101 bits (254), Expect = 6e-30
 Identities = 35/64 (54%), Positives = 49/64 (76%), Gaps = 1/64 (1%)

Query: 60  YYKGGFEPKMTKREASLILGVSQSA-NRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAK 118
           + KGGF+PKM  +EA  IL ++++   + K+KE H++I+  NHPD+GGSP+LA KINEAK
Sbjct: 2   FLKGGFDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAK 61

Query: 119 DLLE 122
           D LE
Sbjct: 62  DFLE 65

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae} Length = 65

 Score = 71.0 bits (174), Expect = 5e-18
 Identities = 18/58 (31%), Positives = 29/58 (50%), Gaps = 3/58 (5%)

Query: 69  MTKREASLILGVSQS---ANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQ 123
           MT  E+  IL + +S    N  KI      +  +N  ++GGS YL +K+  A + L+ 
Sbjct: 1   MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKW 58

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C Length = 174

 Score = 46.4 bits (110), Expect = 2e-07
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 77  ILGVSQSA--NRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
           +LG+ +SA  N   +++A+ +     HPD+GG      K+N     +E   
Sbjct: 16  LLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGV 66

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1 Length = 114

 Score = 43.3 bits (102), Expect = 1e-06
 Identities = 14/51 (27%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 77  ILGVSQSA--NRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQSK 125
           +LG+ +SA  N   +++A+ +     HPD+GG      K+N     +E   
Sbjct: 13  LLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDGV 63

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1 Length = 79

 Score = 42.2 bits (99), Expect = 2e-06
 Identities = 12/50 (24%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 77  ILGVSQSA--NRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS 124
           +L + +    +  ++++A+K+   L HPD+GGS  L  ++N      +  
Sbjct: 16  LLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTE 65

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens} Length = 155

 Score = 38.7 bits (90), Expect = 9e-05
 Identities = 15/52 (28%), Positives = 28/52 (53%)

Query: 68  KMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKD 119
           +M K++   ILG   SAN   +K+ ++++I + HPD+  +   A  + E   
Sbjct: 6   QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQ 57

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 36.1 bits (84), Expect = 3e-04
 Identities = 16/56 (28%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAK---INEAKDLL 121
            +  +   ILGVS+ A+   +K+A++R+    HPD+  +P        I  A  +L
Sbjct: 4   GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVL 59

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 88

 Score = 35.7 bits (83), Expect = 5e-04
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 69  MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSPYLAAK---INEAKDLL 121
            +      ILGV +SA+  +IK+A  ++    HPD+  SP   AK   I EA + L
Sbjct: 4   GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETL 59

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus} Length = 780

 Score = 37.0 bits (85), Expect = 6e-04
 Identities = 14/63 (22%), Positives = 28/63 (44%), Gaps = 1/63 (1%)

Query: 61  YKGGFEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDR-GGSPYLAAKINEAKD 119
           +  G       +    +LGVS++A+  +I++A K++    HPD+   +P       +   
Sbjct: 10  HSSGHIEGRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINR 69

Query: 120 LLE 122
             E
Sbjct: 70  AYE 72

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	125
2guz_A	71	Mitochondrial import inner membrane translocase su	99.89
2guz_B	65	Mitochondrial import inner membrane translocase su	99.88
1faf_A	79	Large T antigen; J domain, HPD motif, anti-paralle	99.73
1iur_A	88	KIAA0730 protein; DNAJ like domain, riken structur	99.67
2yua_A	99	Williams-beuren syndrome chromosome region 18 prot	99.6
2ys8_A	90	RAB-related GTP-binding protein RABJ; DNAJ domain,	99.6
2ctr_A	88	DNAJ homolog subfamily B member 9; J-domain, chape	99.6
2dn9_A	79	DNAJ homolog subfamily A member 3; J-domain, TID1,	99.59
2o37_A	92	Protein SIS1; HSP40, J-domain, cochaperone, APC900	99.58
2och_A	73	Hypothetical protein DNJ-12; HSP40, J-domain, chap	99.58
2ej7_A	82	HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, nati	99.57
2ctp_A	78	DNAJ homolog subfamily B member 12; J-domain, chap	99.56
2ctw_A	109	DNAJ homolog subfamily C member 5; J-domain, chape	99.55
1gh6_A	114	Large T antigen; tumor suppressor, oncoprotein, an	99.55
1wjz_A	94	1700030A21RIK protein; J-domain, DNAJ like protein	99.53
2cug_A	88	Mkiaa0962 protein; DNAJ-like domain, structural ge	99.53
2dmx_A	92	DNAJ homolog subfamily B member 8; DNAJ J domain,	99.53
2ctq_A	112	DNAJ homolog subfamily C member 12; J-domain, chap	99.52
1hdj_A	77	Human HSP40, HDJ-1; molecular chaperone; NMR {Homo	99.51
2lgw_A	99	DNAJ homolog subfamily B member 2; J domain, HSJ1A	99.49
2l6l_A	155	DNAJ homolog subfamily C member 24; DPH4, Zn-CSL,	99.47
2qsa_A	109	DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, s	99.47
2pf4_E	174	Small T antigen; PP2A, SV40, DNAJ, aalpha subunit,	99.47
2qwo_B	92	Putative tyrosine-protein phosphatase auxilin; cha	99.43
1bq0_A	103	DNAJ, HSP40; chaperone, heat shock, protein foldin	99.43
3apq_A	210	DNAJ homolog subfamily C member 10; thioredoxin fo	99.34
3lz8_A	329	Putative chaperone DNAJ; structure genomics, struc	99.33
3ag7_A	106	Putative uncharacterized protein F9E10.5; J-domain	99.31
1fpo_A	171	HSC20, chaperone protein HSCB; molecular chaperone	99.31
3hho_A	174	CO-chaperone protein HSCB homolog; structural geno	99.27
3bvo_A	207	CO-chaperone protein HSCB, mitochondrial precurso;	99.23
1n4c_A	182	Auxilin; four helix bundle, protein binding; NMR {	99.22
3uo3_A	181	J-type CO-chaperone JAC1, mitochondrial; structura	99.06
3apo_A	780	DNAJ homolog subfamily C member 10; PDI family, th	98.97
2y4t_A	450	DNAJ homolog subfamily C member 3; chaperone, endo	97.98

>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.89  E-value=2.2e-23  Score=132.48  Aligned_cols=66  Identities=53%  Similarity=0.960  Sum_probs=63.1

Q ss_pred             ccccCCCCCCCCHHHHHHHhCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q psy5624          59 KYYKGGFEPKMTKREASLILGVSQ-SANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        59 ~~~~~~~~~~m~~~eA~~iLgl~~-~~~~~~Ik~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~~  124 (125)
                      +||.|+|+..|+.++||+||||++ +++.++|+++||+|++++|||++|+++.|++|++||++|.++
T Consensus         1 ~~~~g~~~~~m~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~~~~f~~i~~Aye~L~~~   67 (71)
T 2guz_A            1 GFLKGGFDPKMNSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGSPFLATKINEAKDFLEKR   67 (71)
T ss_dssp             CCCCSCCCSSCCHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCCHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCCCCHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHhhh
Confidence            478999999999999999999999 799999999999999999999999999999999999999864

>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}

Probab=99.88  E-value=3.3e-23  Score=130.01  Aligned_cols=55  Identities=33%  Similarity=0.467  Sum_probs=53.4

Q ss_pred             CCHHHHHHHhCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhc
Q psy5624          69 MTKREASLILGVSQS---ANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQ  123 (125)
Q Consensus        69 m~~~eA~~iLgl~~~---~~~~~Ik~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~  123 (125)
                      ||.+||++||||+++   ++.++|+++||+||..||||+|||+|++++|++|+|+|..
T Consensus         1 mt~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~yl~~ki~~Ake~l~~   58 (65)
T 2guz_B            1 MTLDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSFYLQSKVYRAAERLKW   58 (65)
T ss_dssp             CCHHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHH
Confidence            899999999999999   8999999999999999999999999999999999999975

>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1

Probab=99.73  E-value=3.4e-18  Score=110.53  Aligned_cols=56  Identities=23%  Similarity=0.322  Sum_probs=52.5

Q ss_pred             CCHHHHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q psy5624          69 MTKREASLILGVSQS--ANRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        69 m~~~eA~~iLgl~~~--~~~~~Ik~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~~  124 (125)
                      ....++|+||||+++  ++.++||++||+|++++|||++|+.+.|++|++||++|.+.
T Consensus         8 ~~~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~~~~f~~i~~AYe~L~~~   65 (79)
T 1faf_A            8 ADKERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTE   65 (79)
T ss_dssp             HHHHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             hhHHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHHhhH
Confidence            455789999999999  99999999999999999999999999999999999999863

>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.67  E-value=1.2e-16  Score=105.44  Aligned_cols=58  Identities=14%  Similarity=0.160  Sum_probs=53.8

Q ss_pred             CCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhhc
Q psy5624          66 EPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-----PYLAAKINEAKDLLEQ  123 (125)
Q Consensus        66 ~~~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-----~~~~~~i~~Aye~L~~  123 (125)
                      ...++..++|+||||+++++.++||++||+|++++|||++++     .+.|++|++||++|.+
T Consensus        10 ~~~~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~   72 (88)
T 1iur_A           10 PRGSILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK   72 (88)
T ss_dssp             CSSSCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            457889999999999999999999999999999999999875     4799999999999986

>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=1.9e-15  Score=101.07  Aligned_cols=60  Identities=27%  Similarity=0.299  Sum_probs=54.4

Q ss_pred             CCCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          65 FEPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        65 ~~~~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      ....|+..++|+||||+++++.++||++||+|++++|||++++    .+.|++|++||++|.+.
T Consensus        10 ~~~~~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~   73 (99)
T 2yua_A           10 GDCSYSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGSAEAAERFTRISQAYVVLGSA   73 (99)
T ss_dssp             CCCSSCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSCSHHHHHHHHHHHHHHHTTSH
T ss_pred             CCCCCCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCH
Confidence            4556888999999999999999999999999999999999864    57999999999999864

>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=1.1e-15  Score=100.77  Aligned_cols=53  Identities=26%  Similarity=0.412  Sum_probs=48.9

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCC---CCHHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRG---GSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkg---gs~~~~~~i~~Aye~L~~~  124 (125)
                      .++|+||||+++++.++||++||+|++++|||++   +..+.|++|++||++|.+.
T Consensus        27 ~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~   82 (90)
T 2ys8_A           27 KDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVAPGSEDAFKAVVNARTALLKN   82 (90)
T ss_dssp             SSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCCTTHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCc
Confidence            4678999999999999999999999999999997   5678999999999999863

>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.60  E-value=1.4e-15  Score=99.56  Aligned_cols=55  Identities=31%  Similarity=0.373  Sum_probs=50.0

Q ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          70 TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        70 ~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      +..++|+||||+++++.++|+++||+|++++|||++++   .+.|++|++||++|.+.
T Consensus         5 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~a~~~f~~i~~Ay~~L~d~   62 (88)
T 2ctr_A            5 SSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKSPDAEAKFREIAEAYETLSDA   62 (88)
T ss_dssp             CCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCSHHHHHHHHHHHHHHHHHHSS
T ss_pred             CCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHHHCCH
Confidence            34568899999999999999999999999999999886   47899999999999875

>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.59  E-value=1.6e-15  Score=97.21  Aligned_cols=56  Identities=25%  Similarity=0.329  Sum_probs=49.9

Q ss_pred             CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          69 MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        69 m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      ++..++|+||||+++++.++|+++||+|++++|||++++    .+.|++|++||++|.++
T Consensus         4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~~~a~~~f~~i~~Ay~~L~d~   63 (79)
T 2dn9_A            4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDDPKAKEKFSQLAEAYEVLSDE   63 (79)
T ss_dssp             SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSCTTHHHHHHHHHHHHHHHHSH
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCHHHHHHHHHHHHHHHHHCCH
Confidence            344568899999999999999999999999999999764    58899999999999874

>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}

Probab=99.58  E-value=2.8e-15  Score=98.98  Aligned_cols=55  Identities=29%  Similarity=0.408  Sum_probs=50.7

Q ss_pred             CHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCC-CCHHHHHHHHHHHHHhhcC
Q psy5624          70 TKREASLILGVSQSANRMKIKEAHKRIITLNHPDRG-GSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        70 ~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkg-gs~~~~~~i~~Aye~L~~~  124 (125)
                      ...++|+||||+++++.++|+++||+|++++|||++ ++.+.|++|++||++|.+.
T Consensus         6 ~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~f~~i~~Ay~~L~d~   61 (92)
T 2o37_A            6 KETKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGDTEKFKEISEAFEILNDP   61 (92)
T ss_dssp             SCCHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCCHHHHHHHHHHHHHHTSH
T ss_pred             cCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCChHHHHHHHHHHHHHHCCH
Confidence            446899999999999999999999999999999996 6789999999999999874

>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A

Probab=99.58  E-value=3.4e-15  Score=94.47  Aligned_cols=53  Identities=23%  Similarity=0.317  Sum_probs=48.7

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-~~~~~~i~~Aye~L~~~  124 (125)
                      .++|+||||+++++.++|+++||+|++.+|||++++ .+.|++|++||++|.++
T Consensus         8 ~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~~~~f~~i~~Ay~~L~d~   61 (73)
T 2och_A            8 TGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDGAEQFKQISQAYEVLSDE   61 (73)
T ss_dssp             CCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTCHHHHHHHHHHHHHHTSH
T ss_pred             CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCHHHHHHHHHHHHHHHCCH
Confidence            367899999999999999999999999999999764 79999999999999864

>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=2.7e-15  Score=96.75  Aligned_cols=53  Identities=23%  Similarity=0.303  Sum_probs=48.6

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-----~~~~~~i~~Aye~L~~~  124 (125)
                      .++|+||||+++++.++|+++||+|++++|||++++     .+.|++|++||++|.++
T Consensus         9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~   66 (82)
T 2ej7_A            9 VDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDA   66 (82)
T ss_dssp             CCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSST
T ss_pred             cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCH
Confidence            468899999999999999999999999999999875     35899999999999875

>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.56  E-value=1.6e-15  Score=97.02  Aligned_cols=56  Identities=27%  Similarity=0.313  Sum_probs=50.0

Q ss_pred             CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          69 MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        69 m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      ++..++|+||||+++++.++|+++||+|++.+|||++++   .+.|++|++||++|.++
T Consensus         4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~   62 (78)
T 2ctp_A            4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHAPGATEAFKAIGTAYAVLSNP   62 (78)
T ss_dssp             SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSSHHHHHHHHHHHHHHHHHTSH
T ss_pred             CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCH
Confidence            344578899999999999999999999999999999854   57899999999999864

>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}

Probab=99.55  E-value=6.3e-15  Score=100.19  Aligned_cols=59  Identities=20%  Similarity=0.319  Sum_probs=52.5

Q ss_pred             CCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          66 EPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        66 ~~~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      ...++..++|+||||+++++.++||++||+|++++|||++++    .+.|++|++||++|.++
T Consensus        11 ~~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~   73 (109)
T 2ctw_A           11 SLSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDNPEAADKFKEINNAHAILTDA   73 (109)
T ss_dssp             CTTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTCHHHHHHHHHHHHHHHHHTCH
T ss_pred             ccCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHcCH
Confidence            345556789999999999999999999999999999999875    57899999999999874

>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1

Probab=99.55  E-value=1.5e-15  Score=104.48  Aligned_cols=53  Identities=25%  Similarity=0.278  Sum_probs=50.0

Q ss_pred             HHHHHHhCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANR--MKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~--~~Ik~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~~  124 (125)
                      .++|+||||+++++.  ++||++||+|++++|||++++.+.|++|++||++|.+.
T Consensus         8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~~e~f~~I~~AYevL~d~   62 (114)
T 1gh6_A            8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDG   62 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHHH
T ss_pred             hhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCccHHHHHHHHHHHHHHCCH
Confidence            578899999999988  99999999999999999999999999999999999864

>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1

Probab=99.53  E-value=1.7e-15  Score=99.95  Aligned_cols=58  Identities=28%  Similarity=0.374  Sum_probs=52.1

Q ss_pred             CCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC----------CHHHHHHHHHHHHHhhcC
Q psy5624          67 PKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG----------SPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        67 ~~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg----------s~~~~~~i~~Aye~L~~~  124 (125)
                      ..|+..++|+||||+++++.++||++||+|++++|||++.          ..+.|++|++||++|.+.
T Consensus        11 ~~~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~   78 (94)
T 1wjz_A           11 EQTLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNE   78 (94)
T ss_dssp             SSSSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred             ccCCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCH
Confidence            4567789999999999999999999999999999999964          247899999999999875

>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}

Probab=99.53  E-value=9e-15  Score=95.74  Aligned_cols=54  Identities=28%  Similarity=0.398  Sum_probs=49.2

Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC---CHHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGG---SPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg---s~~~~~~i~~Aye~L~~~  124 (125)
                      ..++|+||||+++++.++||++||+|++++|||+++   ..+.|++|++||++|.++
T Consensus        16 ~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d~   72 (88)
T 2cug_A           16 DFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKDPGAEDRFIQISKAYEILSNE   72 (88)
T ss_dssp             SSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCSTTHHHHHHHHHHHHHHHHSH
T ss_pred             CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCChhHHHHHHHHHHHHHHHCCH
Confidence            357899999999999999999999999999999976   358999999999999864

>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.53  E-value=9e-15  Score=96.31  Aligned_cols=53  Identities=28%  Similarity=0.335  Sum_probs=48.3

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-----~~~~~~i~~Aye~L~~~  124 (125)
                      .++|+||||+++++.++|+++||+|++++|||++++     .+.|++|++||++|.++
T Consensus         9 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~   66 (92)
T 2dmx_A            9 ANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDS   66 (92)
T ss_dssp             CCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSH
T ss_pred             cCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCH
Confidence            467899999999999999999999999999999765     47899999999999864

>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.52  E-value=1.4e-14  Score=98.87  Aligned_cols=56  Identities=20%  Similarity=0.219  Sum_probs=50.8

Q ss_pred             CCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          69 MTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        69 m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      +...+.|+||||+++++.++||++||+|++++|||++++    .+.|++|++||++|.+.
T Consensus        17 ~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~vL~d~   76 (112)
T 2ctq_A           17 EDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPENPKAVETFQKLQKAKEILTNE   76 (112)
T ss_dssp             CCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTCSTHHHHHHHHHHHHHHHHSH
T ss_pred             cCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCH
Confidence            445789999999999999999999999999999999874    68999999999999864

>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1

Probab=99.51  E-value=1.8e-14  Score=91.87  Aligned_cols=52  Identities=29%  Similarity=0.353  Sum_probs=47.3

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+++++.++|+++||+|++.+|||++++   .+.|++|++||++|.++
T Consensus         4 ~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~~~~~~~f~~i~~Ay~~L~d~   58 (77)
T 1hdj_A            4 DYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDP   58 (77)
T ss_dssp             CSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCH
T ss_pred             CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccHHHHHHHHHHHHHHHCCH
Confidence            35799999999999999999999999999999753   58999999999999864

>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}

Probab=99.49  E-value=4.6e-14  Score=94.57  Aligned_cols=52  Identities=29%  Similarity=0.298  Sum_probs=47.4

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-----~~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+++++.++||++||+|++++|||++++     .+.|++|++||++|.+.
T Consensus         3 d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~   59 (99)
T 2lgw_A            3 SYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDK   59 (99)
T ss_dssp             CHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSH
T ss_pred             CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCH
Confidence            46899999999999999999999999999999865     37899999999999874

>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}

Probab=99.47  E-value=3.7e-14  Score=101.41  Aligned_cols=57  Identities=28%  Similarity=0.421  Sum_probs=50.8

Q ss_pred             CCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------HHHHHHHHHHHHHhhcC
Q psy5624          68 KMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----------PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        68 ~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----------~~~~~~i~~Aye~L~~~  124 (125)
                      .|+..+.|+||||+++++.++||++||+|++++|||++++          .+.|.+|++||++|.++
T Consensus         6 ~~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp   72 (155)
T 2l6l_A            6 QMPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNE   72 (155)
T ss_dssp             CCCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSH
T ss_pred             cCCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCH
Confidence            4556789999999999999999999999999999999653          27899999999999874

>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}

Probab=99.47  E-value=3.2e-14  Score=96.42  Aligned_cols=53  Identities=21%  Similarity=0.275  Sum_probs=49.0

Q ss_pred             HHHHHHhCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC-------HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSA-NRMKIKEAHKRIITLNHPDRGGS-------PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~-~~~~Ik~ayr~l~~~~HPDkggs-------~~~~~~i~~Aye~L~~~  124 (125)
                      .++|+||||++++ +.++||++||+|++.+|||++++       .+.|++|++||++|.++
T Consensus        15 ~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~   75 (109)
T 2qsa_A           15 ENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDD   75 (109)
T ss_dssp             SCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             CCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCH
Confidence            5789999999999 99999999999999999999876       47899999999999874

>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C

Probab=99.47  E-value=9.7e-15  Score=107.06  Aligned_cols=54  Identities=24%  Similarity=0.265  Sum_probs=47.6

Q ss_pred             HHHHHHHhCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSAN--RMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~--~~~Ik~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~~  124 (125)
                      ..++|+||||+++++  .++||++||++++++|||++|+++.|++|++||++|.++
T Consensus        10 ~~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~e~F~~I~~AYevLsdp   65 (174)
T 2pf4_E           10 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMEDG   65 (174)
T ss_dssp             HHHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CCTTTTHHHHHHHHHHHH
T ss_pred             cccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCHHHHHHHHHHHHHhCCH
Confidence            468999999999988  699999999999999999999999999999999999864

>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A

Probab=99.43  E-value=2e-14  Score=95.53  Aligned_cols=49  Identities=14%  Similarity=0.259  Sum_probs=44.4

Q ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------HHHHHHHHHHHHHhhc
Q psy5624          75 SLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-------PYLAAKINEAKDLLEQ  123 (125)
Q Consensus        75 ~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-------~~~~~~i~~Aye~L~~  123 (125)
                      |++|||+..++.++||++||++++++|||++.+       ...|+.|++||++|.+
T Consensus        36 y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~   91 (92)
T 2qwo_B           36 WKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN   91 (92)
T ss_dssp             CCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred             CeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence            589999999999999999999999999999642       3589999999999986

>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A

Probab=99.43  E-value=1.5e-14  Score=97.24  Aligned_cols=52  Identities=37%  Similarity=0.468  Sum_probs=47.2

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      ++|+||||+++++.++||++||+|++++|||++++    .+.|++|++||++|.++
T Consensus         4 ~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~a~~~f~~i~~Ay~~L~d~   59 (103)
T 1bq0_A            4 DYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDS   59 (103)
T ss_dssp             CSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTTCTHHHHHHHHTTTTTSTTCS
T ss_pred             CHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHCCH
Confidence            35699999999999999999999999999999764    47899999999999875

>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}

Probab=99.34  E-value=6.5e-13  Score=97.44  Aligned_cols=52  Identities=31%  Similarity=0.399  Sum_probs=47.3

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+++++.++||++||+|++++|||++++    .+.|++|++||++|.++
T Consensus         3 ~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~~~~~~~f~~i~~Ay~~L~~~   58 (210)
T 3apq_A            3 NFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDE   58 (210)
T ss_dssp             CHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTCTTHHHHHHHHHHHHHHHTSH
T ss_pred             CHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHhCCH
Confidence            46899999999999999999999999999999752    47899999999999864

>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A

Probab=99.33  E-value=1e-13  Score=110.21  Aligned_cols=59  Identities=25%  Similarity=0.321  Sum_probs=0.0

Q ss_pred             CCCCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          66 EPKMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        66 ~~~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      ...|+..++|+||||+++++.++||++||+|++++|||++++   .+.|++|++||++|.+.
T Consensus        22 ~~~m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~a~~~f~~i~~Ay~vL~d~   83 (329)
T 3lz8_A           22 SNAMELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKENDAEAKFKDLAEAWEVLKDE   83 (329)
T ss_dssp             --------------------------------------------------------------
T ss_pred             cccccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCChHHHHHHHHHHHHHHHhhhh
Confidence            456888999999999999999999999999999999999754   57899999999999875

>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}

Probab=99.31  E-value=1.9e-13  Score=92.81  Aligned_cols=50  Identities=16%  Similarity=0.155  Sum_probs=43.8

Q ss_pred             HHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCC----C-------HHHHHHHHHHHHHhhcC
Q psy5624          74 ASLILGVSQSANRMKIKEAHKRIITLNHPDRGG----S-------PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        74 A~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkgg----s-------~~~~~~i~~Aye~L~~~  124 (125)
                      .|+|||++. ++.++||++||++++++||||++    +       .+.|++|++||++|.+.
T Consensus        43 ~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~  103 (106)
T 3ag7_A           43 WKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTL  103 (106)
T ss_dssp             CCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCc
Confidence            457899986 99999999999999999999942    3       57899999999999875

>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1

Probab=99.31  E-value=1.7e-12  Score=94.63  Aligned_cols=52  Identities=19%  Similarity=0.251  Sum_probs=46.1

Q ss_pred             HHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCC--H-------HHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSA--NRMKIKEAHKRIITLNHPDRGGS--P-------YLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~--~~~~Ik~ayr~l~~~~HPDkggs--~-------~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||++++  |.++|+++||+|++++|||++++  .       ..|.+||+||++|+++
T Consensus         2 d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp   64 (171)
T 1fpo_A            2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHP   64 (171)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             CHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCc
Confidence            468999999998  99999999999999999999543  2       4799999999999874

>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}

Probab=99.23  E-value=6.1e-12  Score=94.28  Aligned_cols=54  Identities=19%  Similarity=0.241  Sum_probs=46.8

Q ss_pred             HHHHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCCCC---------HHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQS--ANRMKIKEAHKRIITLNHPDRGGS---------PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~--~~~~~Ik~ayr~l~~~~HPDkggs---------~~~~~~i~~Aye~L~~~  124 (125)
                      ..+.|+||||+++  ++.++|+++||+|.+++|||++++         ...|++||+||++|+++
T Consensus        42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp  106 (207)
T 3bvo_A           42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAP  106 (207)
T ss_dssp             TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCH
Confidence            4578999999986  789999999999999999999653         14679999999999874

>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J

Probab=99.22  E-value=1.8e-12  Score=95.51  Aligned_cols=52  Identities=15%  Similarity=0.293  Sum_probs=46.1

Q ss_pred             HHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------HHHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-------PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-------~~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||++.++.++||++||++++++|||++++       .+.|++|++||++|.+.
T Consensus       118 d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~  176 (182)
T 1n4c_A          118 TKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQ  176 (182)
T ss_dssp             CCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred             chhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCH
Confidence            45699999999999999999999999999999532       36899999999999863

>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A

Probab=99.06  E-value=3.5e-11  Score=88.47  Aligned_cols=52  Identities=12%  Similarity=0.268  Sum_probs=45.3

Q ss_pred             HHHHHh------CCCC-CCCHHHHHHHHHHHHHHhCCCCCC-CHHHHHHHHHHHHHhhcC
Q psy5624          73 EASLIL------GVSQ-SANRMKIKEAHKRIITLNHPDRGG-SPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iL------gl~~-~~~~~~Ik~ayr~l~~~~HPDkgg-s~~~~~~i~~Aye~L~~~  124 (125)
                      ..|+||      |+++ +++.++|+++||+|++++|||+++ +.+.|.+|++||++|.++
T Consensus        12 d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~a~~~f~~i~~AY~vL~dp   71 (181)
T 3uo3_A           12 TFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQGSEQSSTLNQAYHTLKDP   71 (181)
T ss_dssp             CTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCSCSSGGGSHHHHHHHHHSH
T ss_pred             CHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCccHHHHHHHHHHHHHHHcCh
Confidence            345899      4655 799999999999999999999977 678899999999999874

>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}

Probab=98.97  E-value=7e-11  Score=101.10  Aligned_cols=57  Identities=28%  Similarity=0.357  Sum_probs=30.6

Q ss_pred             CCCHHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          68 KMTKREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        68 ~m~~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      .....+.|+||||+++++.++||++||+|++++|||++++    .+.|++|++||++|.++
T Consensus        17 ~~~~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~~~~~~~f~~i~~ay~~L~~~   77 (780)
T 3apo_A           17 GRHDQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNNPNAHGDFLKINRAYEVLKDE   77 (780)
T ss_dssp             ------CHHHHTCCTTCCHHHHHHHHCC-----------------------CTHHHHHHSH
T ss_pred             CCCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCChHHHHHHHHHHHHHHHHcCh
Confidence            3344678999999999999999999999999999999752    46899999999999874

>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A

Probab=97.98  E-value=4.1e-06  Score=64.66  Aligned_cols=51  Identities=27%  Similarity=0.328  Sum_probs=45.0

Q ss_pred             HHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCH-------HHHHHHHHHHHHhhcC
Q psy5624          74 ASLILGVSQSANRMKIKEAHKRIITLNHPDRGGSP-------YLAAKINEAKDLLEQS  124 (125)
Q Consensus        74 A~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs~-------~~~~~i~~Aye~L~~~  124 (125)
                      .+.+||+...++.++++++|+++.+.+|||+..++       ..|++|++||++|.++
T Consensus       384 ~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~  441 (450)
T 2y4t_A          384 YYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDP  441 (450)
T ss_dssp             SGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGG
T ss_pred             HHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCH
Confidence            35678898888999999999999999999998764       4899999999999875

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	125
d1fafa_	79	Large T antigen, the N-terminal J domain {Murine p	99.74
d1gh6a_	114	Large T antigen, the N-terminal J domain {Simian v	99.64
d1iura_	88	Hypothetical protein KIAA0730 {Human (Homo sapiens	99.54
d1xbla_	75	DnaJ chaperone, N-terminal (J) domain {Escherichia	99.53
d1wjza_	94	CSL-type zinc finger-containing protein 3 (J-domai	99.43
d1hdja_	77	HSP40 {Human (Homo sapiens) [TaxId: 9606]}	99.41
d1fpoa1	76	HSC20 (HSCB), N-terminal (J) domain {Escherichia c	99.32
d1nz6a_	98	Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}	99.25

>d1fafa_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Murine polyomavirus [TaxId: 10634]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Murine polyomavirus [TaxId: 10634]

Probab=99.74  E-value=1.3e-18  Score=111.26  Aligned_cols=54  Identities=24%  Similarity=0.327  Sum_probs=50.8

Q ss_pred             HHHHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhcC
Q psy5624          71 KREASLILGVSQSA--NRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQS  124 (125)
Q Consensus        71 ~~eA~~iLgl~~~~--~~~~Ik~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~~  124 (125)
                      .+++|+||||++++  |.++|+++||++++.+|||+||+++.|++||+||++|.++
T Consensus        10 ~~~~y~iLgl~~~~~~~~~~IkkaYr~l~~~~HPDk~g~~e~~~~in~Ay~~L~d~   65 (79)
T d1fafa_          10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGSHALMQELNSLWGTFKTE   65 (79)
T ss_dssp             HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCCHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCCCHHHHHHHHHHHHHHhCcccCCCHHHHHHHHHHHHHHCCH
Confidence            46899999999987  9999999999999999999999999999999999999864

>d1gh6a_ a.2.3.1 (A:) Large T antigen, the N-terminal J domain {Simian virus 40, Sv40 [TaxId: 10633]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Large T antigen, the N-terminal J domain
species: Simian virus 40, Sv40 [TaxId: 10633]

Probab=99.64  E-value=3.2e-17  Score=110.83  Aligned_cols=52  Identities=27%  Similarity=0.319  Sum_probs=48.7

Q ss_pred             HHHHHHhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhhc
Q psy5624          72 REASLILGVSQSA--NRMKIKEAHKRIITLNHPDRGGSPYLAAKINEAKDLLEQ  123 (125)
Q Consensus        72 ~eA~~iLgl~~~~--~~~~Ik~ayr~l~~~~HPDkggs~~~~~~i~~Aye~L~~  123 (125)
                      .+-|+||||+.++  +.++||++||+|++++|||+||+++.|++|++||++|.+
T Consensus         8 ~~ly~iLGv~~~a~~~~~~IKkAYrkla~k~HPDk~~~~e~F~~I~~AY~vLsd   61 (114)
T d1gh6a_           8 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDEEKMKKMNTLYKKMED   61 (114)
T ss_dssp             HHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCTTTTTHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCCCCHHHHHHHHHHHHHHhcccchhhHHHHHHHHHHHHHhCC
Confidence            4667999999998  788999999999999999999999999999999999985

>d1iura_ a.2.3.1 (A:) Hypothetical protein KIAA0730 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Hypothetical protein KIAA0730
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=4.5e-15  Score=96.32  Aligned_cols=53  Identities=15%  Similarity=0.203  Sum_probs=48.6

Q ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-----HHHHHHHHHHHHHhhc
Q psy5624          71 KREASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-----PYLAAKINEAKDLLEQ  123 (125)
Q Consensus        71 ~~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-----~~~~~~i~~Aye~L~~  123 (125)
                      .+|+|+|||++++++.+|||++||+|++++|||++++     .+.|++|++||++|.+
T Consensus        15 ~~~~y~iL~v~~~as~~eIKkAYrrl~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~~   72 (88)
T d1iura_          15 LKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEK   72 (88)
T ss_dssp             HHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHhCCCCCCCHHHHHHHHHHHHHHhccccccchhhHHHHHHHHHHHHHHHHHH
Confidence            6899999999999999999999999999999999754     3679999999999975

>d1xbla_ a.2.3.1 (A:) DnaJ chaperone, N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: DnaJ chaperone, N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.53  E-value=4.5e-15  Score=93.39  Aligned_cols=51  Identities=37%  Similarity=0.459  Sum_probs=45.9

Q ss_pred             HHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----HHHHHHHHHHHHHhhcC
Q psy5624          74 ASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        74 A~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----~~~~~~i~~Aye~L~~~  124 (125)
                      .|+||||++++|.++|+++||++++.+|||++++    ...|.+|++||++|.++
T Consensus         5 yY~vLgv~~~As~~eIk~aYr~l~~~~HPDk~~~~~~~~~~f~~i~~Ay~vL~d~   59 (75)
T d1xbla_           5 YYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGDKEAEAKFKEIKEAYEVLTDS   59 (75)
T ss_dssp             TTTTTCCSSSCCHHHHHHHHHHHHHHTCCTTCTTTCHHHHHHHHHHHHHHHTTSS
T ss_pred             HHHHcCCCCCcCHHHHHHHHHHHHhhhhhhccCCChHHHHHHHHHHHHHHhcCCH
Confidence            3589999999999999999999999999999653    36799999999999875

>d1wjza_ a.2.3.1 (A:) CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK) {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: CSL-type zinc finger-containing protein 3 (J-domain protein DjC7, 1700030a21RIK)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.43  E-value=3.5e-14  Score=92.87  Aligned_cols=53  Identities=28%  Similarity=0.401  Sum_probs=47.0

Q ss_pred             HHHHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC----------HHHHHHHHHHHHHhhcC
Q psy5624          72 REASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS----------PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        72 ~eA~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs----------~~~~~~i~~Aye~L~~~  124 (125)
                      .+.|+||||+++++.++|+++|++|++.+|||++..          .+.|..|++||++|.+.
T Consensus        16 ~d~Y~iLgv~~~as~~eIk~aY~~l~~~~HPDk~~~~~~~~~~~~a~~~f~~I~~Ay~vL~d~   78 (94)
T d1wjza_          16 KDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNE   78 (94)
T ss_dssp             SCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSS
T ss_pred             cChHHHcCCCCCcCHHHHHHHHHHHHHHhhhhhccccchHHHHHHHHHHHHHHHHHHHHhCCH
Confidence            468999999999999999999999999999999532          25689999999999875

>d1hdja_ a.2.3.1 (A:) HSP40 {Human (Homo sapiens) [TaxId: 9606]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSP40
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.41  E-value=1.4e-13  Score=86.74  Aligned_cols=51  Identities=29%  Similarity=0.343  Sum_probs=46.2

Q ss_pred             HHHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC---HHHHHHHHHHHHHhhcC
Q psy5624          74 ASLILGVSQSANRMKIKEAHKRIITLNHPDRGGS---PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        74 A~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs---~~~~~~i~~Aye~L~~~  124 (125)
                      .|+||||+++++.++|+++|+++.+++|||++.+   .+.+.+|++||++|.++
T Consensus         5 yY~iLgv~~~as~~eIk~ay~~l~~~~hPD~~~~~~~~~~~~~i~~Ay~vLsdp   58 (77)
T d1hdja_           5 YYQTLGLARGASDEEIKRAYRRQALRYHPDKNKEPGAEEKFKEIAEAYDVLSDP   58 (77)
T ss_dssp             SHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCCTTHHHHHHHHHHHHHHTTCH
T ss_pred             hHHHcCCCCCcCHHHHHHHHHHHHHHhccccccchhHHHHHHHHHHHHHHhcCH
Confidence            4599999999999999999999999999999764   37799999999999864

>d1fpoa1 a.2.3.1 (A:1-76) HSC20 (HSCB), N-terminal (J) domain {Escherichia coli [TaxId: 562]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: HSC20 (HSCB), N-terminal (J) domain
species: Escherichia coli [TaxId: 562]

Probab=99.32  E-value=1.4e-12  Score=81.69  Aligned_cols=52  Identities=21%  Similarity=0.296  Sum_probs=43.4

Q ss_pred             HHHHHhCCCCC--CCHHHHHHHHHHHHHHhCCCCC--CCH-------HHHHHHHHHHHHhhcC
Q psy5624          73 EASLILGVSQS--ANRMKIKEAHKRIITLNHPDRG--GSP-------YLAAKINEAKDLLEQS  124 (125)
Q Consensus        73 eA~~iLgl~~~--~~~~~Ik~ayr~l~~~~HPDkg--gs~-------~~~~~i~~Aye~L~~~  124 (125)
                      +.|+||||+.+  ++.++|+++||++++.+|||+.  .++       ..++.|++||++|.++
T Consensus         2 nyy~lLgl~~~~~~d~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~a~~~~~~i~~Ay~vL~dp   64 (76)
T d1fpoa1           2 DYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHP   64 (76)
T ss_dssp             HHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSH
T ss_pred             ChHHHCCCCCCCCCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHHHHHHHHHHHHHhCCH
Confidence            46799999986  4689999999999999999983  222       5578899999999874

>d1nz6a_ a.2.3.1 (A:) Auxilin J-domain {Cow (Bos taurus) [TaxId: 9913]}

class: All alpha proteins
fold: Long alpha-hairpin
superfamily: Chaperone J-domain
family: Chaperone J-domain
domain: Auxilin J-domain
species: Cow (Bos taurus) [TaxId: 9913]

Probab=99.25  E-value=3.2e-13  Score=88.87  Aligned_cols=50  Identities=16%  Similarity=0.308  Sum_probs=44.8

Q ss_pred             HHHhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC-------HHHHHHHHHHHHHhhcC
Q psy5624          75 SLILGVSQSANRMKIKEAHKRIITLNHPDRGGS-------PYLAAKINEAKDLLEQS  124 (125)
Q Consensus        75 ~~iLgl~~~~~~~~Ik~ayr~l~~~~HPDkggs-------~~~~~~i~~Aye~L~~~  124 (125)
                      |++||+++.+|.++||++||++++.+|||++++       ...|+.|++||++|.+.
T Consensus        36 y~~Lgl~~~~t~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~I~~Ay~~L~d~   92 (98)
T d1nz6a_          36 WKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQ   92 (98)
T ss_dssp             CCCCCGGGCCSHHHHHHHHHHHHHHSCHHHHTTSTTHHHHHHHHHHHHHHHHHHHTT
T ss_pred             CeecCCCccCCHHHHHHHHHHHHHHhccccCCChHHHHHHHHHHHHHHHHHHHHCCH
Confidence            578999999999999999999999999998543       35789999999999875