Psyllid ID: psy5825
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
|---|
|
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 596 | 2.2.26 [Sep-21-2011] | |||||||
| A1ZAI5 | 625 | Putative fatty acyl-CoA r | no | N/A | 0.575 | 0.548 | 0.322 | 2e-50 | |
| Q5R834 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.572 | 0.662 | 0.334 | 3e-48 | |
| Q8WVX9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.572 | 0.662 | 0.334 | 3e-48 | |
| Q7ZXF5 | 515 | Fatty acyl-CoA reductase | N/A | N/A | 0.572 | 0.662 | 0.334 | 4e-48 | |
| Q922J9 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.572 | 0.662 | 0.334 | 1e-47 | |
| Q66H50 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.479 | 0.555 | 0.363 | 2e-47 | |
| Q5ZM72 | 515 | Fatty acyl-CoA reductase | yes | N/A | 0.572 | 0.662 | 0.317 | 8e-46 | |
| Q0P5J1 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.436 | 0.504 | 0.339 | 1e-39 | |
| Q96K12 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.436 | 0.504 | 0.339 | 7e-39 | |
| Q7TNT2 | 515 | Fatty acyl-CoA reductase | no | N/A | 0.436 | 0.504 | 0.351 | 2e-38 |
| >sp|A1ZAI5|FACR1_DROME Putative fatty acyl-CoA reductase CG5065 OS=Drosophila melanogaster GN=CG5065 PE=3 SV=1 | Back alignment and function desciption |
|---|
Score = 201 bits (510), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 117/363 (32%), Positives = 189/363 (52%), Gaps = 20/363 (5%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
PE+ IY+L+R K+ + V RL E LF+ L+ E+ L KV ISGDI+ LGI
Sbjct: 150 PEIRNIYLLIRPKRGQEVSARLTELLNAPLFESLRQEKPKELS-KVIPISGDITSEELGI 208
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S DQ + ++ V+ H+AA+++FDE ++ + T+N+ T+ L++L R L A++HVST
Sbjct: 209 SEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLGTKRLVELCHRMLSLDALIHVST 268
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R D+ E Y P ++ +D+ ++ ++ L+ L+ L G N+Y+FTKA+ E
Sbjct: 269 AYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRLIGK-RPNTYTFTKALAE 327
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
++ K LP+A+VRPSIV ++ EP GW +N GP G + A G+ T + +
Sbjct: 328 HMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFRTMMCEKNYV 387
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
D++PVD+ N+M+ W+TA + + +YN PI W E+
Sbjct: 388 ADMVPVDIVINLMIAAAWRTATRKSN--------------NLLIYNCCTGQRNPIIWSEF 433
Query: 534 MNSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLNKP 593
+ A + + L W T + N+ M L H +P I+D V R + K
Sbjct: 434 VK--HAMTSVRKHPLEGCL--WYPTGDLRMNRPMNTLNCIAKHFLPAYILDGVARIMGKK 489
Query: 594 PRI 596
P +
Sbjct: 490 PFV 492
|
Catalyzes the reduction of saturated fatty acyl-CoA to fatty alcohols. Drosophila melanogaster (taxid: 7227) EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: nEC: 2 |
| >sp|Q5R834|FACR1_PONAB Fatty acyl-CoA reductase 1 OS=Pongo abelii GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (491), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 191/365 (52%), Gaps = 24/365 (6%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P+V +Y+L+R K +T QER+ E +LFDRL++E D + K+ I+ +++QP L +
Sbjct: 35 PKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPD-FREKIIAINSELTQPKLAL 93
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S D++ I ++I H AA++RF+E ++DA LN+ ATR+L+ LA + L+ +HVST
Sbjct: 94 SEEDKEVIIESTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I E YPP + L ++ + + ++ L G N+Y +TKA+ E
Sbjct: 154 AYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGD-RPNTYIYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
VV++ KL +A+VRPSIV ++WKEP GW +N GP G A G++ T A ++
Sbjct: 213 YVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTIRASNNAL 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
DL+PVDV NM L W + ++ PR + VYN + S+ P W E
Sbjct: 273 ADLVPVDVVVNMSLAAAWYSGVNR-------------PR-NIMVYNCTTGSTNPFHWGEV 318
Query: 534 MNSVQAAGKCD--EQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLN 591
V + K + EQ A + N +Y + H P + D LR
Sbjct: 319 EYHVISTFKRNPLEQ------AFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTG 372
Query: 592 KPPRI 596
+ PR+
Sbjct: 373 RSPRM 377
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Pongo abelii (taxid: 9601) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q8WVX9|FACR1_HUMAN Fatty acyl-CoA reductase 1 OS=Homo sapiens GN=FAR1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (490), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 191/365 (52%), Gaps = 24/365 (6%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P+V +Y+L+R K +T QER+ E +LFDRL++E D + K+ I+ +++QP L +
Sbjct: 35 PKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPD-FREKIIAINSELTQPKLAL 93
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S D++ I ++I H AA++RF+E ++DA LN+ ATR+L+ LA + L+ +HVST
Sbjct: 94 SEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I E YPP + L ++ + + ++ L G N+Y +TKA+ E
Sbjct: 154 AYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGD-RPNTYIYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
VV++ KL +A+VRPSIV ++WKEP GW +N GP G A G++ T A ++
Sbjct: 213 YVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTIRASNNAL 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
DL+PVDV NM L W + ++ PR + VYN + S+ P W E
Sbjct: 273 ADLVPVDVVVNMSLAAAWYSGVNR-------------PR-NIMVYNCTTGSTNPFHWGEV 318
Query: 534 MNSVQAAGKCD--EQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLN 591
V + K + EQ A + N +Y + H P + D LR
Sbjct: 319 EYHVISTFKRNPLEQ------AFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTG 372
Query: 592 KPPRI 596
+ PR+
Sbjct: 373 RSPRM 377
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7ZXF5|FACR1_XENLA Fatty acyl-CoA reductase 1 OS=Xenopus laevis GN=far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 193 bits (490), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 192/365 (52%), Gaps = 24/365 (6%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P +Y+L+R K + +ER+AE +LFD+L++EQ D Q KV IS +++QP L +
Sbjct: 35 PNTKAVYVLVRHKAGQKPRERVAEMMSCKLFDKLRDEQPDCAQ-KVIAISSELTQPELDM 93
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S DQ + I ++ H AA++RF+E ++DA LN+ ATR+LL LA + +L+ +HVST
Sbjct: 94 SKEDQDTLIDCIDIVFHCAATVRFNESLRDAMQLNVIATRQLLYLAQKMKKLEVFIHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I+E YPP + L ++ + + ++ L G N+Y++TKA+ E
Sbjct: 154 AYANCNRKQIEEVVYPPPVDPKKLIESLEWMDDSLVNDITPKLIGD-RPNTYTYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
VV++ KL +A+VRPSIV ++WKEP GW +N GP G A G++ T A ++
Sbjct: 213 YVVQQEGSKLNIAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNAV 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
DLIPVDV N L W + ++ P +++ VYN + + P W E
Sbjct: 273 ADLIPVDVVVNTTLAAAWYSGVNR-----PKNML---------VYNCTTGGTNPFHWGEV 318
Query: 534 MNSVQAAGKCD--EQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLN 591
V + K + EQ A + N +Y + H P ++ D LR
Sbjct: 319 EYHVISTFKRNPLEQ------AFRRPNVNLTSNHLLYHYWIAVSHKAPALLYDVYLRITG 372
Query: 592 KPPRI 596
+ PR+
Sbjct: 373 RSPRM 377
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Xenopus laevis (taxid: 8355) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q922J9|FACR1_MOUSE Fatty acyl-CoA reductase 1 OS=Mus musculus GN=Far1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (485), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 122/365 (33%), Positives = 189/365 (51%), Gaps = 24/365 (6%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P V +Y+L+R K +T QER+ E +LFDRL++E D + K+ I+ +++QP L +
Sbjct: 35 PRVNSVYVLVRQKAGQTPQERVEEILSSKLFDRLRDENPD-FREKIIAINSELTQPKLAL 93
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S D++ I +VI H AA++RF+E ++DA LN+ ATR+L+ LA + L+ +HVST
Sbjct: 94 SEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I E YPP + L ++ + + ++ L G N+Y +TKA+ E
Sbjct: 154 AYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGD-RPNTYIYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
VV++ KL +A+VRPSIV ++WKEP GW +N GP G A G++ T A ++
Sbjct: 213 YVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNAL 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
DL+PVDV N L W + ++ PR + VYN + S+ P W E
Sbjct: 273 ADLVPVDVVVNTSLAAAWYSGVNR-------------PR-NIMVYNCTTGSTNPFHWGEV 318
Query: 534 MNSVQAAGKCD--EQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLN 591
V + K + EQ A + N +Y + H P + D LR
Sbjct: 319 EYHVISTFKRNPLEQ------AFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRMTG 372
Query: 592 KPPRI 596
+ PR+
Sbjct: 373 RSPRM 377
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q66H50|FACR1_RAT Fatty acyl-CoA reductase 1 OS=Rattus norvegicus GN=Far1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 191 bits (484), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/305 (36%), Positives = 171/305 (56%), Gaps = 19/305 (6%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P+V +Y+L+R K +T QER+ E +LFDRL++E D Q K+ I+ +++QP L +
Sbjct: 35 PKVNSVYVLVRQKAGQTPQERVEEILSGKLFDRLRDENPDFRQ-KIIAINSELTQPKLAL 93
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S D++ I +VI H AA++RF+E ++DA LN+ ATR+L+ LA + L+ +HVST
Sbjct: 94 SEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I E YPP + L ++ + + ++ L G N+Y +TKA+ E
Sbjct: 154 AYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGD-RPNTYIYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
VV++ KL +A+VRPSIV ++WKEP GW +N GP G A G++ T A ++
Sbjct: 213 YVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNAL 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLE- 532
DL+PVDV N L W + ++ PR + VYN + S+ P W E
Sbjct: 273 ADLVPVDVVVNTSLAAAWYSGVNR-------------PR-NIMVYNCTTGSTNPFHWGEV 318
Query: 533 --YMN 535
Y+N
Sbjct: 319 GDYLN 323
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q5ZM72|FACR1_CHICK Fatty acyl-CoA reductase 1 OS=Gallus gallus GN=FAR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 185 bits (470), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 116/365 (31%), Positives = 192/365 (52%), Gaps = 24/365 (6%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P+V +Y+L+R K +T + R+ E +LFDRL+ EQ D + K+ +I+ +++QP L +
Sbjct: 35 PKVKAVYVLVRPKAGQTPEARIEEITSCKLFDRLREEQPD-FKEKIIVITSELTQPELDL 93
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S+ ++ + I++I H AA++RF+E ++DA LN+ +T++LL LA + + L+ +HVST
Sbjct: 94 SNPVKEKLIECINIIFHCAATVRFNETLRDAVQLNVLSTKQLLSLAQQMTNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I+E YPP + L ++ + + ++ L G N+Y++TKA+ E
Sbjct: 154 AYAYCNRKHIEEVVYPPPVDPKKLMDSLEWMDDSLVNDITPKLIGD-RPNTYTYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
VV++ +L A++RPSIV ++WKEP GW +N GP G A G++ T A +
Sbjct: 213 YVVQQEGARLNTAIIRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNGAV 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
DL+PVDV NM L W + ++ PR + VYN + + P W E
Sbjct: 273 ADLVPVDVVVNMTLAAAWYSGVNR-------------PR-NIMVYNCTTGGTNPFHWSEV 318
Query: 534 MNSVQAAGKCD--EQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLN 591
V + K + EQ A + N +Y + H P + D LR
Sbjct: 319 EYHVISTFKRNPLEQ------AFRRPNVNLTSNHLLYHYWIAVSHKAPAFLYDIYLRITG 372
Query: 592 KPPRI 596
+ PR+
Sbjct: 373 RSPRM 377
|
Catalyzes the reduction of saturated fatty acyl-CoA with chain length C16 or C18 to fatty alcohols. Gallus gallus (taxid: 9031) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q0P5J1|FACR2_BOVIN Fatty acyl-CoA reductase 2 OS=Bos taurus GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 165 bits (417), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 156/262 (59%), Gaps = 2/262 (0%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P++ +YIL+R K+ +T+Q+R+ + +LF+++K E + K+ IS D++Q I
Sbjct: 35 PDLKVVYILVRPKQGQTLQQRVFQILDSKLFEKVK-EVCPNVHEKIRAISADLNQNDFAI 93
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S D + + H ++I H AA++RFD+ ++ A LN+ AT++LL +A++ +L+A +H+ST
Sbjct: 94 SKEDMKELLSHTNIIFHCAATVRFDDHLRHAVQLNVTATQQLLLMASQMPKLEAFIHIST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
+++ + I E YP + + M+ + ++ ++ L G + N+Y++TKA+GE
Sbjct: 154 AFSNCNLKHIDEVVYPCPVEPKKIIDSMEWLDDAIIDEITPKLIGD-WPNTYTYTKALGE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
VV++ L +A++RPSI+ +TW+EP GW +NL GP G A G + + A
Sbjct: 213 VVVQQEGGNLNIAIIRPSIMGATWQEPFPGWVDNLNGPSGLIIAAGKGFLRSIRATPMAV 272
Query: 474 CDLIPVDVATNMMLGVVWKTAL 495
DLIP D N+ L V W TA+
Sbjct: 273 ADLIPADTVVNLTLAVGWYTAV 294
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q96K12|FACR2_HUMAN Fatty acyl-CoA reductase 2 OS=Homo sapiens GN=FAR2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 162 bits (410), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/262 (33%), Positives = 151/262 (57%), Gaps = 2/262 (0%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P++ IYIL+R K +T+Q+R+ + +LF+++K E + K+ I D++Q I
Sbjct: 35 PDLKVIYILVRPKAGQTLQQRVFQILDSKLFEKVK-EVCPNVHEKIRAIYADLNQNDFAI 93
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S D Q + ++I H AA++RFD+ ++ A LN+ ATR+LL +A++ +L+A +H+ST
Sbjct: 94 SKEDMQELLSCTNIIFHCAATVRFDDTLRHAVQLNVTATRQLLLMASQMPKLEAFIHIST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y++ + I E YP + + ++ + ++ ++ L + N Y++TKA+GE
Sbjct: 154 AYSNCNLKHIDEVIYPCPVEPKKIIDSLEWLDDAIIDEITPKLIRD-WPNIYTYTKALGE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
VV++ L +A++RPSIV +TW+EP GW +N+ GP G G + A
Sbjct: 213 MVVQQESRNLNIAIIRPSIVGATWQEPFPGWVDNINGPNGIIIATGKGFLRAIKATPMAV 272
Query: 474 CDLIPVDVATNMMLGVVWKTAL 495
D+IPVD N+ML V W TA+
Sbjct: 273 ADVIPVDTVVNLMLAVGWYTAV 294
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Homo sapiens (taxid: 9606) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
| >sp|Q7TNT2|FACR2_MOUSE Fatty acyl-CoA reductase 2 OS=Mus musculus GN=Far2 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 161 bits (407), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 92/262 (35%), Positives = 150/262 (57%), Gaps = 2/262 (0%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P + IYIL+R K +T+QER+ + +LF+++K E + K+ IS D++Q I
Sbjct: 35 PHLKVIYILVRPKSGQTLQERVFQILNSKLFEKVK-EVCPNVHEKIRPISADLNQRDFAI 93
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S D Q + ++I H AA++RFD +++A LN+ AT++LL +A++ +L+A +H+ST
Sbjct: 94 SKEDVQELLSCTNIIFHCAATVRFDAHLREAVQLNVTATQQLLLMASQMPKLEAFIHIST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
+++ I E YP + M+ + +E ++ L G N+Y++TKA+GE
Sbjct: 154 AFSNCNLSHIDEVIYPCPVEPRKIIDSMEWLDDSIIEEITPKLIGD-RPNTYTYTKALGE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
VV++ L +A+VRPSIV +TW+EP GW +NL GP G G + + A
Sbjct: 213 IVVQQESGNLNVAIVRPSIVGATWQEPFPGWVDNLNGPSGLIIATGKGFLRSIKATPMAV 272
Query: 474 CDLIPVDVATNMMLGVVWKTAL 495
D+IPVD N+ + V W TA+
Sbjct: 273 ADVIPVDTVVNLTIAVGWYTAV 294
|
Catalyzes the reduction of fatty acyl-CoA to fatty alcohols. The preferred substrates are C16, C18, C18:1 and C18:2 but low activity can be observed with C10-C14 substrates. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 2 EC: . EC: 1 EC: . EC: n EC: 2 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 596 | ||||||
| 345497107 | 536 | PREDICTED: putative fatty acyl-CoA reduc | 0.578 | 0.643 | 0.342 | 1e-59 | |
| 193622556 | 551 | PREDICTED: putative fatty acyl-CoA reduc | 0.560 | 0.606 | 0.339 | 2e-59 | |
| 307169656 | 500 | Fatty acyl-CoA reductase 1 [Camponotus f | 0.595 | 0.71 | 0.363 | 8e-59 | |
| 328720028 | 553 | PREDICTED: putative fatty acyl-CoA reduc | 0.575 | 0.620 | 0.351 | 8e-59 | |
| 345482170 | 552 | PREDICTED: putative fatty acyl-CoA reduc | 0.593 | 0.641 | 0.343 | 9e-59 | |
| 332030738 | 537 | Putative fatty acyl-CoA reductase [Acrom | 0.583 | 0.648 | 0.341 | 5e-58 | |
| 91084843 | 509 | PREDICTED: similar to conserved hypothet | 0.587 | 0.687 | 0.353 | 9e-58 | |
| 307176419 | 541 | Fatty acyl-CoA reductase 1 [Camponotus f | 0.583 | 0.643 | 0.344 | 2e-57 | |
| 357617056 | 518 | hypothetical protein KGM_10439 [Danaus p | 0.578 | 0.666 | 0.364 | 2e-57 | |
| 340723120 | 533 | PREDICTED: putative fatty acyl-CoA reduc | 0.585 | 0.654 | 0.356 | 3e-57 |
| >gi|345497107|ref|XP_001600277.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 237 bits (605), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 127/371 (34%), Positives = 209/371 (56%), Gaps = 26/371 (7%)
Query: 236 VGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISS 295
+G +Y+LLR+KK KT +R EQ +D L+DRL+ EQ + KV II GD + +LG+SS
Sbjct: 67 MGKLYMLLRAKKGKTPAQRFKEQLEDPLYDRLRREQPN-FADKVVIIEGDTGEKNLGLSS 125
Query: 296 HDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355
+ F+ + H++ H AA++RFDE ++ +N++ + +L LA LKA +HVST Y
Sbjct: 126 TARDFLVKNTHIVFHGAATVRFDESLRKVVNINVRGVKLMLLLAKEMKNLKAFVHVSTAY 185
Query: 356 THSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415
+H + I+E++Y P + ++ + E L+ ++ + G + N+Y+F+KA+GE V
Sbjct: 186 SHCNLDYIEEKYYKPAMDPDKAISMVDMLDDEVLQHITPRVIGS-WPNTYAFSKAVGEDV 244
Query: 416 VEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCD 475
V Y LP +VRPSIV+ST KEP+ GWS+NLYG G + GA + L+ + + +K +
Sbjct: 245 VRLYSRGLPTCIVRPSIVLSTMKEPVAGWSDNLYGATGVSVGAYVCLLRVLHCEAEKTAE 304
Query: 476 LIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTD-----PPVYNLSISSSYPITW 530
+IP D N ++ W + +A + P+ R+D PP+YN S P+TW
Sbjct: 305 MIPADFVINNVIVAAWDVNKNEKKMA-----IEPVGRSDLEVSQPPIYNCVSSCQKPLTW 359
Query: 531 -----LEYMNSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDT 585
L Y+N + + S L +W + F + + ++ Y + FLH+IP +I+D
Sbjct: 360 NDFMHLNYINGID---------VPSRLTLWYHVFILTKYKWFYNFAILFLHLIPAIIVDN 410
Query: 586 VLRCLNKPPRI 596
+ R + P +
Sbjct: 411 LARLTGRKPML 421
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|193622556|ref|XP_001950244.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 236 bits (603), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 120/353 (33%), Positives = 208/353 (58%), Gaps = 19/353 (5%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P + IY+L+RSKK K V +RL + F+D LF RLK+E KV ++GD S P LG+
Sbjct: 89 PHIKHIYLLIRSKKGKNVDQRLEDIFEDRLFKRLKHEVPK-YYHKVSGVAGDCSLPGLGL 147
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S + + + +++I H AA++RFDE I+ A +N+ TRELL LA + + LK + HVST
Sbjct: 148 SVSSRNTLINEVNIIFHGAATVRFDEHIRVAMNINVSGTRELLSLARKITNLKVMAHVST 207
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y++ R ++E+FY P+ YED+ ++ + + + L+ ++ + G + N+Y+FTK++ E
Sbjct: 208 AYSNCNRLHVEEKFYDPIADYEDVLKLISSNDDQTLQDMTKEIIGDL-PNTYAFTKSLAE 266
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
+ + LP+ + RP++V++T++EP+ GW +N+YGP G GA G++HT++ +
Sbjct: 267 DAIRREAQDLPILVFRPTVVIATYREPVRGWIDNVYGPTGLIVGAGTGVLHTYFGDSNII 326
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
D+IPVD+ N ++ +TA ++ + P+Y S ++ PI W ++
Sbjct: 327 TDMIPVDMVVNALICATKETATNN-------------KDDEIPIYTCSSAAQKPIKWNDF 373
Query: 534 MNSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTV 586
+ + G Y ++ AIW Y+F N + Y L +F H++PG ++DT+
Sbjct: 374 IEMNRRHG----IYWPTIRAIWYYSFWATNNPYFYALLNFFCHIVPGYLLDTL 422
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307169656|gb|EFN62238.1| Fatty acyl-CoA reductase 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 135/371 (36%), Positives = 217/371 (58%), Gaps = 16/371 (4%)
Query: 231 KCYPEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPS 290
+C P++ IY+L+R+KK K+ ++R E F + ++D+LK EQ + KV +I GD+S+
Sbjct: 56 RCCPDIEKIYVLMRAKKEKSPEQRFQEHFNEPVYDKLKKEQPN-FSTKVIMIQGDLSKLD 114
Query: 291 LGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILH 350
LG+S +++ I ++I HAAA++RF+E ++ A +N++ T++ L LA LKA ++
Sbjct: 115 LGLSPENRKRILDT-NIIFHAAATVRFNEHLRLAVNINVRGTKQFLLLAKEMPDLKAFVY 173
Query: 351 VSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKA 410
VST Y+H + I+E+FYPP + + ++ + E++E L+ L G + N+YS+TKA
Sbjct: 174 VSTAYSHCIHKFIEEKFYPPPIESDKILTLLDILDDEQVEKLTPALIGK-WPNTYSYTKA 232
Query: 411 IGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKH 470
I E V+ +Y ++P+ +VRPSIVVST K+PI GW NN+YG GAA ALGL+ T Y
Sbjct: 233 IAEDVMRQYSNEIPVCIVRPSIVVSTAKDPIPGWINNVYGAAGAAMSTALGLLRTMYCVP 292
Query: 471 DKKCDLIPVDVATNMMLGVVW-----KTALDHGHVAPPASLVAPIPRTDPPVYNLSISSS 525
+ DL+P D + ++ W K AL + A P ++ I R P+YN
Sbjct: 293 EIVADLVPADYVISHLIVASWDVAKKKNALLNIDNANPE--ISEIERV--PIYNYVSICQ 348
Query: 526 YPITWLEYMNSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDT 585
PITW ++ + K I S +W Y + + +++FM + V FLH IP I+DT
Sbjct: 349 NPITWGKFFD----LNKIHAMQIVSTHVVWYYIYVLNRSKFMNDVCVVFLHKIPAAIVDT 404
Query: 586 VLRCLNKPPRI 596
+L + P +
Sbjct: 405 LLFLSGRKPML 415
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|328720028|ref|XP_001946873.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Acyrthosiphon pisum] | Back alignment and taxonomy information |
|---|
Score = 234 bits (598), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 127/361 (35%), Positives = 207/361 (57%), Gaps = 18/361 (4%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P + IY+L+RSKK K V ERL + F+D LF RLK E KV I+GD S P LG+
Sbjct: 90 PHIKHIYLLIRSKKGKNVDERLEDIFEDRLFKRLKYEVPK-YYHKVSGIAGDCSLPGLGL 148
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S + + +++I H AA++RFDE I+ A +N+ TRE+++LA + LK I H+ST
Sbjct: 149 SVSSRNTLIKEVNIIFHGAATVRFDEHIRVAMDINVSGTREMMNLAKTITNLKVIAHIST 208
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
+++ R + E+FY P+ Y+D+ ++ +T+ + L ++S + G + N+YSFTK++ E
Sbjct: 209 AFSNCNRLHVDEKFYDPIADYKDVLKLVSSTDDQTLHGMTSKILGDL-PNTYSFTKSLAE 267
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
+ + LP+ + RP++VV T++EP+ GW +N+YGP G GA G++HT++ +
Sbjct: 268 DAIRREAQDLPILVFRPTVVVGTYREPVRGWIDNVYGPTGIVVGACTGVLHTYFLDSNFV 327
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
D+IPVD+ N ++ +TA A + + P+Y S S PI W E
Sbjct: 328 TDIIPVDIVVNALICAAKETA------------TANVKHDEIPIYTCSSSIQKPIKWKEL 375
Query: 534 MNSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLNKP 593
M + G Q+ ++ AIW +F + +N ++Y + +F H++PG +DT R K
Sbjct: 376 MELNKRYGI---QW-PTIRAIWYSSFWVTKNPYLYAMLNFFCHVVPGYTLDTFARLSGKK 431
Query: 594 P 594
P
Sbjct: 432 P 432
|
Source: Acyrthosiphon pisum Species: Acyrthosiphon pisum Genus: Acyrthosiphon Family: Aphididae Order: Hemiptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|345482170|ref|XP_001605372.2| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Nasonia vitripennis] | Back alignment and taxonomy information |
|---|
Score = 234 bits (597), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 131/381 (34%), Positives = 218/381 (57%), Gaps = 27/381 (7%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P +G +Y+LLR+KK KT +RL EQF D L+DRL++EQ + +V II GD + LG+
Sbjct: 67 PNMGKVYMLLRAKKGKTPAQRLKEQFNDLLYDRLRHEQPN-FASQVVIIEGDTGEEDLGL 125
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
SS D+ + + HV+ H AA++RFDE ++ A +N++ + +L LA + LKA +H+ST
Sbjct: 126 SSADRDLLVKNTHVVFHGAATVRFDETLRKAININVRGVKMMLLLAKEMNNLKAFVHIST 185
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y H + I+E++Y P + ++ + E L+ ++ + G + N+Y+F+K++GE
Sbjct: 186 AYAHCTLDYIEEKYYKPAMDPNEAIAMVAKSEDEALQRMAPRIIGA-WPNTYTFSKSVGE 244
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
V Y LP+++VRPSIV+ T K+P+VGWS+N+YG GA G + L+ F+
Sbjct: 245 DAVRMYSRGLPISVVRPSIVLPTIKDPVVGWSDNMYGSTGAVVGIYVSLLRVFHCDLKNV 304
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA----------PIPRTD-------PP 516
+LIP D+ N ++ W T + + S++ P+ ++D P
Sbjct: 305 VELIPADIVINNIIVAAWDT--NKLWLVKKKSIILSNQKKLAVEQPVGQSDFLDVTTQPL 362
Query: 517 VYNLSISSSYPITWLEYMN-SVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFL 575
+YN S P+TW EY++ +++ A DE S L +W F + +++Y+L FL
Sbjct: 363 IYNCVSSCQKPLTWDEYLHVNLRYA---DEA--PSRLTLWYRVFIPVKYEWLYILGKLFL 417
Query: 576 HMIPGMIMDTVLRCLNKPPRI 596
H+IP +I+DT+ R + PR+
Sbjct: 418 HLIPAIIVDTLARLTGRKPRL 438
|
Source: Nasonia vitripennis Species: Nasonia vitripennis Genus: Nasonia Family: Pteromalidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|332030738|gb|EGI70414.1| Putative fatty acyl-CoA reductase [Acromyrmex echinatior] | Back alignment and taxonomy information |
|---|
Score = 232 bits (591), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 124/363 (34%), Positives = 212/363 (58%), Gaps = 15/363 (4%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P V IY+L+R KK K V +R + F D +F +L++EQ + ++ I+GD SQP+LGI
Sbjct: 70 PGVTSIYLLVRPKKGKDVHQRTEDIFDDTVFSKLRDEQPK-FRHQIVAIAGDCSQPNLGI 128
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S+ D+ + + ++ H AA++RFDE ++ A +N+++TR++++L + LK+ +HVST
Sbjct: 129 SAQDRATLIREVSIVFHVAATVRFDEKLKLAVPINVRSTRDVVNLCKEITNLKSFIHVST 188
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + + I+E+FY P + L +++ + E ++ L G + N+Y+FTKA+ E
Sbjct: 189 AYANCPQSVIEEKFYDPPMDSDKLIALIECIEDKLAEDITPQLLGK-WPNTYTFTKAVAE 247
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
+V+ K LP+ + RP+IV+ST+ EP GW +NLYGP G AAGA GL+ + +
Sbjct: 248 NVIRKQAGDLPVGIFRPAIVISTYLEPARGWIDNLYGPTGVAAGAGTGLLRSIHCDGSVH 307
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
+++P D+ N ++ W A D + R+D P+YN +S+ PIT Y
Sbjct: 308 ANVVPADLTVNALIACAWDVANDQR--------INNKSRSDAPIYN-YVSTDNPIT---Y 355
Query: 534 MNSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLNKP 593
N + K Q I S A+W Y+F +++ ++L V+F H++P +++DT C+ +
Sbjct: 356 DNLKDMSSKYGLQ-IPSNRAVWYYSFRNNKHRIIHLFFVYFWHLLPALLVDTATVCIGRQ 414
Query: 594 PRI 596
PR+
Sbjct: 415 PRL 417
|
Source: Acromyrmex echinatior Species: Acromyrmex echinatior Genus: Acromyrmex Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|91084843|ref|XP_966905.1| PREDICTED: similar to conserved hypothetical protein [Tribolium castaneum] gi|270008576|gb|EFA05024.1| hypothetical protein TcasGA2_TC015111 [Tribolium castaneum] | Back alignment and taxonomy information |
|---|
Score = 231 bits (589), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 128/362 (35%), Positives = 204/362 (56%), Gaps = 12/362 (3%)
Query: 235 EVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGIS 294
++ IYIL R+KK K +Q R+ E F D +FDRLK E + KV I GD S P LGIS
Sbjct: 45 DISTIYILARNKKGKNLQSRIDELFDDSIFDRLKKEFPK-FRHKVVGIGGDCSLPDLGIS 103
Query: 295 SHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTL 354
D+Q + + + VI H AA++RFDE ++ A +N++A +++L LA LK+++HVST
Sbjct: 104 QQDRQVLINEVSVIFHVAATVRFDEKLKMAVAINVRAPQDMLKLAHEMPHLKSMVHVSTA 163
Query: 355 YTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGES 414
Y++ + I+E YP + L + +T L+ ++ M+ + N+Y++TKA+ E
Sbjct: 164 YSNVPNKVIEERLYPVPVDSKKLILMAETLGDNVLDNITPMVLDK-WPNTYTYTKAVAED 222
Query: 415 VVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKC 474
+V + LP+ + RPSIVVST++EP W NNLYGP G AGA G++ +A +
Sbjct: 223 IVRQDGLDLPIGIYRPSIVVSTYQEPTEAWINNLYGPTGVCAGAGSGILRALHANSEVNA 282
Query: 475 DLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYM 534
+++PVD+ N ++ W + + + + + PVY+ S+ P+ W +M
Sbjct: 283 NIVPVDMCVNSLIATAWDVGVKFENSKKSCN------KYEIPVYHFESSNDQPLNWGRFM 336
Query: 535 NSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLNKPP 594
+ GK SV AIW YTF + +N + YL+ FLH +P + +D L C+ K P
Sbjct: 337 RLSYSHGKKT----PSVKAIWYYTFNLYKNYYAYLIATIFLHYLPALFVDGALLCMGKSP 392
Query: 595 RI 596
++
Sbjct: 393 KM 394
|
Source: Tribolium castaneum Species: Tribolium castaneum Genus: Tribolium Family: Tenebrionidae Order: Coleoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|307176419|gb|EFN65993.1| Fatty acyl-CoA reductase 1 [Camponotus floridanus] | Back alignment and taxonomy information |
|---|
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 125/363 (34%), Positives = 209/363 (57%), Gaps = 15/363 (4%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P V IY+L+R KK K V +R E F D LF +L++EQ + ++ I+GD SQP+LGI
Sbjct: 76 PGVASIYLLVRPKKGKDVHQRTEEIFDDPLFIKLRDEQPK-FRHQIVAIAGDCSQPNLGI 134
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S D+ I + ++ H AA++RFDE ++ A +N+++TR++L+L LK+ +HVST
Sbjct: 135 SWQDRTTIIREVSIVFHVAATVRFDEKLKLAVPINVRSTRDILNLCKEIPNLKSFVHVST 194
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + + I+E+FY P + L +M+ + E ++ L G + N+Y++TKA+ E
Sbjct: 195 AYANCPQRVIEEKFYDPPMDSDKLIALMECVEDKLAEDITPQLLGK-WPNTYTYTKAVAE 253
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
+V+ K + LP+ + RP+IV+ST+ EP+ GW +NLYGP G AAGA GL+ + +
Sbjct: 254 NVIRKQVGDLPIGVFRPAIVISTYIEPVRGWIDNLYGPTGVAAGAGTGLLRSIHCDGSVH 313
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
+++P D N ++ W D G++ + +D P+YN +S PIT+ +
Sbjct: 314 ANVVPADFTVNALIACAW----DIGNIQRSNNK----SHSDIPIYN-YVSKDNPITYDQL 364
Query: 534 MNSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLNKP 593
+ G I S AIW Y+F +++ ++L V+F H+ P +++DT C+ +
Sbjct: 365 KDMSAKYG----LEIPSTRAIWYYSFRNNKHRLVHLFFVYFCHLFPALLVDTATVCMGRQ 420
Query: 594 PRI 596
PR+
Sbjct: 421 PRL 423
|
Source: Camponotus floridanus Species: Camponotus floridanus Genus: Camponotus Family: Formicidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|357617056|gb|EHJ70562.1| hypothetical protein KGM_10439 [Danaus plexippus] | Back alignment and taxonomy information |
|---|
Score = 230 bits (586), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 132/362 (36%), Positives = 210/362 (58%), Gaps = 17/362 (4%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P+V IY+L R KKNK + +RL EQF D L+D+L+ E+ D +Q K+ ++ GD+S+ LGI
Sbjct: 54 PDVKKIYLLTRPKKNKDIIKRLQEQFDDCLYDKLRKERPDFIQ-KIQVVDGDVSKIGLGI 112
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
+ D++ I + + I H AA++RFDE ++ A +N++ TRE+L LA C++L+A++H+ST
Sbjct: 113 NDEDRKNIINEVEYIFHGAATVRFDEALKTAVLINVRGTREMLVLARACTKLRALVHIST 172
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y++ ++I E+FY S E + ++++ + + L ++ + G + N+Y++TK + E
Sbjct: 173 AYSNCPLKEIDEKFYESPLSAEKMIDLVESMDDKTLNTITPGILGE-FPNTYAYTKFLAE 231
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
+V+K Y LP+A+ RPSIVV T KEP++GW +N+YGP G GA +GLIHT
Sbjct: 232 DIVQKNSYGLPVAVNRPSIVVGTAKEPLLGWIDNVYGPTGVVVGAGVGLIHTLNCDPKAV 291
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
DL+P D N ++ WK A DH P AP+ + P +YN S P+TW +
Sbjct: 292 ADLVPGDYVVNSVIAAAWKMARDH----PGNHEEAPMDQL-PVIYNYVSSEQKPLTWEMF 346
Query: 534 MNSVQAAGKCDEQY---IASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCL 590
M K +E Y + A+W Y + N F Y +H P ++D V +
Sbjct: 347 M-------KYNELYGIETPPLQAVWAYLLILTPNIFFYKFCCLLMHWFPAYVVDGVCFLI 399
Query: 591 NK 592
K
Sbjct: 400 GK 401
|
Source: Danaus plexippus Species: Danaus plexippus Genus: Danaus Family: Nymphalidae Order: Lepidoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
| >gi|340723120|ref|XP_003399944.1| PREDICTED: putative fatty acyl-CoA reductase CG5065-like [Bombus terrestris] | Back alignment and taxonomy information |
|---|
Score = 229 bits (584), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 130/365 (35%), Positives = 213/365 (58%), Gaps = 16/365 (4%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P++ +Y+++R KK KT ER E F++ ++D+L+ EQ + LQ KV I+ GD ++ G+
Sbjct: 59 PDILRLYMIVRPKKGKTALERYKESFEEVIYDKLRCEQPNFLQ-KVVILEGDAAKEDYGL 117
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S D++ + + +++I HAAA +RFDE I+ A +N+++T+ LL A + KA +HVST
Sbjct: 118 SPEDKKTLMN-VNIIFHAAAVVRFDEKIRVAVNINVRSTKFLLSFAKKLPNFKAFVHVST 176
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
+++ R+ I E Y + + + ++ T + LE ++ ML + N+Y FTKA+GE
Sbjct: 177 AFSNCVRKHIDEVHYTDVIDADKVLTLLDTLDDGRLEQMTPMLLDK-WPNTYVFTKALGE 235
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
+VV KY LP+ +VRPSIV++T+KEPI W NN+YGP G G+ +GL+HT + K +
Sbjct: 236 NVVLKYGDGLPVCIVRPSIVIATYKEPISAWINNMYGPTGVVMGSGIGLLHTLHCKEENI 295
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTD-PPVYNLSISSSYPITWLE 532
D+IP D + ++ W A + VA + + +P + PVYN S PI+W E
Sbjct: 296 ADIIPADYVISNIISSAWDVA--NRKVAIKSDQFSNLPDEEKIPVYNSVSSCQKPISWGE 353
Query: 533 YMNSVQAAGKCDEQY---IASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRC 589
+M K +E Y + S IW YT + + F++ + + LH+IP +I DT+
Sbjct: 354 FM-------KLNEIYGLIVPSTKVIWVYTLTLNRYLFLHNIYTFLLHIIPAIIGDTLAHL 406
Query: 590 LNKPP 594
+ P
Sbjct: 407 TGRTP 411
|
Source: Bombus terrestris Species: Bombus terrestris Genus: Bombus Family: Apidae Order: Hymenoptera Class: Insecta Phylum: Arthropoda Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 596 | ||||||
| FB|FBgn0039620 | 517 | CG1443 [Drosophila melanogaste | 0.489 | 0.564 | 0.311 | 6.8e-49 | |
| FB|FBgn0085371 | 570 | CG34342 [Drosophila melanogast | 0.562 | 0.587 | 0.298 | 2.2e-41 | |
| UNIPROTKB|Q8WVX9 | 515 | FAR1 "Fatty acyl-CoA reductase | 0.476 | 0.551 | 0.317 | 8.4e-41 | |
| FB|FBgn0038032 | 502 | CG10096 [Drosophila melanogast | 0.585 | 0.695 | 0.286 | 9.6e-41 | |
| UNIPROTKB|A5PJQ0 | 515 | FAR1 "Uncharacterized protein" | 0.476 | 0.551 | 0.314 | 1.4e-40 | |
| UNIPROTKB|G8ENM4 | 515 | FAR1 "Uncharacterized protein" | 0.476 | 0.551 | 0.311 | 2.8e-40 | |
| UNIPROTKB|E2R4R9 | 514 | FAR1 "Uncharacterized protein" | 0.476 | 0.552 | 0.317 | 3.6e-40 | |
| MGI|MGI:1914670 | 515 | Far1 "fatty acyl CoA reductase | 0.476 | 0.551 | 0.314 | 4.6e-40 | |
| FB|FBgn0034145 | 625 | CG5065 [Drosophila melanogaste | 0.434 | 0.414 | 0.318 | 1.5e-39 | |
| UNIPROTKB|E1C023 | 517 | FAR1 "Fatty acyl-CoA reductase | 0.474 | 0.547 | 0.301 | 3.2e-39 |
| FB|FBgn0039620 CG1443 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 420 (152.9 bits), Expect = 6.8e-49, Sum P(2) = 6.8e-49
Identities = 97/311 (31%), Positives = 150/311 (48%)
Query: 235 EVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQR-KVHIISGDISQPSLGX 293
EVG IY+L+R+KK K R+ + F D +F ++K Q + R ++ IISGD S P LG
Sbjct: 63 EVGQIYLLIRTKKGKDAFARIEDLFNDPVFAKMK--QVNPKYRCQITIISGDCSLPGLGI 120
Query: 294 XXXXXXXXXXXXXXXXXXXXXLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
+RFDE ++ A +N+ T+E++ LA LKA++HVST
Sbjct: 121 SADERETIMENVNIVLHSAATVRFDEKLKMAIAINVHGTKEIIKLAKEIVNLKALVHVST 180
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
+ H IQE FY S E+ + + ++ L L+ + G Y N+Y+FTK + E
Sbjct: 181 AFAHCNMRHIQERFYSGTMSGENAFKLSECLDEHTLNTLTPTIIKG-YPNTYTFTKVLAE 239
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYXXXXXXXXXXXXXIHTFYAKHDKK 473
+VV++ LP+ + RP IV++T++EP+ GW +N+Y + F D K
Sbjct: 240 NVVQQSAQNLPVTIFRPGIVITTYREPVTGWIDNMYGPCGVIVGIGSGVLRVFTGDMDNK 299
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533
++PVD+ N +L W A + PP+YN + +TW Y
Sbjct: 300 AHIVPVDMCVNALLASAWDIARNKYET--------------PPIYNYVPDAENMVTWRRY 345
Query: 534 MNSVQAAGKCD 544
M G CD
Sbjct: 346 MEDGFEYG-CD 355
|
|
| FB|FBgn0085371 CG34342 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 439 (159.6 bits), Expect = 2.2e-41, P = 2.2e-41
Identities = 104/348 (29%), Positives = 173/348 (49%)
Query: 239 IYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGXXXXXX 298
IY+L+RSK N +VQERL F + +F+R++ E +L KVH I D S L
Sbjct: 103 IYMLIRSKDNMSVQERLKGFFNESIFNRMREESPQLLA-KVHPIRADYSAIDLDIDSADR 161
Query: 299 XXXXXXXXXXXXXXXXLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHS 358
++F+E + DA +N+ T+++LDL LK+ +H+STLY +
Sbjct: 162 AMLSSEVQIVFNVVASVKFNEKLSDAIDINVLGTKKILDLVMEMKHLKSFVHISTLYCNC 221
Query: 359 YREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418
R+ I+E+ Y YE + + +T + E LE + L G + N+Y+ TK E++V
Sbjct: 222 NRKFIKEQVYENEIGYEKIMQIYRTFDDETLEKMRHCLIGQM-PNTYTMTKKCAENLVNH 280
Query: 419 YLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYXXXXXXXXXXXXXIHTFYAKHDKKCDLIP 478
+ +P + RP IV+ST+K+P GW++NLY + Y K K +++P
Sbjct: 281 RAFHMPAGIFRPPIVMSTYKDPFPGWTDNLYGPSGLCTWSARGLVRCIYGKASCKANMVP 340
Query: 479 VDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQ 538
D N M+ W A S V +++ PVYN +S + ITW +YM+ +
Sbjct: 341 ADYVVNAMIATAWDIAR---RFKLRESKVDG--KSELPVYNY-VSDANNITWGQYMH-LS 393
Query: 539 AAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTV 586
G E + A+W +++ + ++ ++ +FLH IP I+D +
Sbjct: 394 RKG-FHEPFDK---ALWCFSYVIIPSKPLHCAIAFFLHNIPAYILDLI 437
|
|
| UNIPROTKB|Q8WVX9 FAR1 "Fatty acyl-CoA reductase 1" [Homo sapiens (taxid:9606)] | Back alignment and assigned GO terms |
|---|
Score = 400 (145.9 bits), Expect = 8.4e-41, Sum P(2) = 8.4e-41
Identities = 96/302 (31%), Positives = 153/302 (50%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGX 293
P+V +Y+L+R K +T QER+ E +LFDRL++E D + K+ I+ +++QP L
Sbjct: 35 PKVNSVYVLVRQKAGQTPQERVEEVLSGKLFDRLRDENPDF-REKIIAINSELTQPKLAL 93
Query: 294 XXXXXXXXXXXXXXXXXXXXXLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
+RF+E ++DA LN+ ATR+L+ LA + L+ +HVST
Sbjct: 94 SEEDKEVIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I E YPP + L ++ + + ++ L G N+Y +TKA+ E
Sbjct: 154 AYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGD-RPNTYIYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYXXXXXXXXXXXXXIHTFYAKHDKK 473
VV++ KL +A+VRPSIV ++WKEP GW +N + T A ++
Sbjct: 213 YVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTIRASNNAL 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITW--L 531
DL+PVDV NM L W + ++ P +++ VYN + S+ P W +
Sbjct: 273 ADLVPVDVVVNMSLAAAWYSGVNR-----PRNIM---------VYNCTTGSTNPFHWGEV 318
Query: 532 EY 533
EY
Sbjct: 319 EY 320
|
|
| FB|FBgn0038032 CG10096 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 433 (157.5 bits), Expect = 9.6e-41, P = 9.6e-41
Identities = 105/367 (28%), Positives = 176/367 (47%)
Query: 232 CYPEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSL 291
C EV IY+LLR+K+ + ++ER A KD +F L + L+R V GD +P L
Sbjct: 33 CTTEVKRIYVLLRAKRGQEMRERCAAWDKDPVFGNLMKTNPEALKRVVPC-GGDCQEPDL 91
Query: 292 GXXXXXXXXXXXXXXXXXXXXXXLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351
G +RF E + A +N +ATR ++ LA S L++ +HV
Sbjct: 92 GLSNSDRQVLIDEVQIVIHTAATVRFVEPLHIALAVNTRATRLMIQLAKEMSHLESFVHV 151
Query: 352 STLYTHSYREDIQEEFYPPLFSY--EDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTK 409
ST Y++ E + E FYP + E + ++++ + E L+ ++ L G Y N+Y++TK
Sbjct: 152 STAYSNCVVEHVSERFYPEHLTCPAEKILELLESISPELLDKMAPALMGK-YPNTYTYTK 210
Query: 410 AIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYXXXXXXXXXXXXXIHTFYAK 469
A+ E V++K LPL++ RP ++++++KEP+ GW +NLY +H
Sbjct: 211 ALTEQVIQKEAKDLPLSIFRPGVIIASYKEPMPGWIDNLYGPIAVLYGAAFGILHITLLN 270
Query: 470 HDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529
+ ++PVD NM+L W TA D P +PP+YN + ++ IT
Sbjct: 271 LKAQAGIVPVDYCVNMVLTCAWNTARDTSIKLSP----------EPPIYNFTPNNDNLIT 320
Query: 530 WLEYMNSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRC 589
W + + A + Y + + + C +++ F H++PG +D LR
Sbjct: 321 WGGFRDK---AARLRYTYPLTKMMWLPFLHCTTI-PWLFRFTAIFYHLLPGYAIDLALRL 376
Query: 590 LNKPPRI 596
K PR+
Sbjct: 377 WGKKPRM 383
|
|
| UNIPROTKB|A5PJQ0 FAR1 "Uncharacterized protein" [Bos taurus (taxid:9913)] | Back alignment and assigned GO terms |
|---|
Score = 396 (144.5 bits), Expect = 1.4e-40, Sum P(2) = 1.4e-40
Identities = 95/302 (31%), Positives = 152/302 (50%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGX 293
P+V +Y+L+R K +T QER+ E +LFDRL++E D + K+ I+ +++QP L
Sbjct: 35 PKVNSVYVLVRQKAGQTPQERVEEVISGKLFDRLRDENPDF-REKIIAINSELTQPKLAL 93
Query: 294 XXXXXXXXXXXXXXXXXXXXXLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
+RF+E ++DA LN+ ATR+L+ LA + L+ +HVST
Sbjct: 94 SEEDKEIIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I E YPP + L ++ + + ++ L G N+Y +TKA+ E
Sbjct: 154 AYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGD-RPNTYIYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYXXXXXXXXXXXXXIHTFYAKHDKK 473
VV++ KL + +VRPSIV ++WKEP GW +N + T A ++
Sbjct: 213 YVVQQEGAKLNVVIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNAL 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITW--L 531
DL+PVDV NM L W + ++ P +++ VYN + S+ P W +
Sbjct: 273 ADLVPVDVVVNMSLAAAWYSGVNR-----PRNIM---------VYNCTTGSTNPFHWGEV 318
Query: 532 EY 533
EY
Sbjct: 319 EY 320
|
|
| UNIPROTKB|G8ENM4 FAR1 "Uncharacterized protein" [Sus scrofa (taxid:9823)] | Back alignment and assigned GO terms |
|---|
Score = 395 (144.1 bits), Expect = 2.8e-40, Sum P(2) = 2.8e-40
Identities = 94/302 (31%), Positives = 153/302 (50%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGX 293
P+V +Y+L+R K +T +ER+ E +LFDRL++E D + K+ I+ +++QP L
Sbjct: 35 PKVNSVYVLVRQKAGQTPKERVEEAISGKLFDRLRDENPDF-REKIIAINSELTQPKLAL 93
Query: 294 XXXXXXXXXXXXXXXXXXXXXLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
+RF+E ++DA LN+ ATR+L+ LA + L+ +HVST
Sbjct: 94 SEEDKKTIIDSTNIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I E YPP + L + ++ + + ++ L G N+Y +TKA+ E
Sbjct: 154 AYAYCNRKHIDEVVYPPPVDPQKLINSLEWMDDGLVNDITPKLIGD-RPNTYIYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYXXXXXXXXXXXXXIHTFYAKHDKK 473
VV++ KL +A+VRPSIV ++WKEP GW +N + T A ++
Sbjct: 213 YVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNAL 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITW--L 531
DL+PVDV N L W + ++ P +++ VYN + S+ P W +
Sbjct: 273 ADLVPVDVVVNTSLAAAWYSGVNR-----PRNIM---------VYNCTTGSTNPFHWGEV 318
Query: 532 EY 533
EY
Sbjct: 319 EY 320
|
|
| UNIPROTKB|E2R4R9 FAR1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] | Back alignment and assigned GO terms |
|---|
Score = 394 (143.8 bits), Expect = 3.6e-40, Sum P(2) = 3.6e-40
Identities = 96/302 (31%), Positives = 152/302 (50%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGX 293
P+V +Y+L+R K +T QER+ E +LFDRL++E D + KV I+ +++QP L
Sbjct: 35 PKVNSVYVLVRQKAGQTPQERVEEVISGKLFDRLRDENPDF-REKVIAINSELTQPKLAL 93
Query: 294 XXXXXXXXXXXXXXXXXXXXXLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
+RF+E ++DA LN+ ATR+L+ LA + L+ +HVST
Sbjct: 94 SEEDKEIIIDSINIIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I E YPP + L ++ + + ++ L G N+Y +TKA+ E
Sbjct: 154 AYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGD-RPNTYIYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYXXXXXXXXXXXXXIHTFYAKHDKK 473
VV++ KL +A+VRPSIV ++WKEP GW +N + T A ++
Sbjct: 213 YVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNAL 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITW--L 531
DL+PVDV N L W + ++ P +++ VYN + S+ P W +
Sbjct: 273 ADLVPVDVVVNTSLAAAWYSGVNR-----PRNIM---------VYNCTTGSTNPFHWGEV 318
Query: 532 EY 533
EY
Sbjct: 319 EY 320
|
|
| MGI|MGI:1914670 Far1 "fatty acyl CoA reductase 1" [Mus musculus (taxid:10090)] | Back alignment and assigned GO terms |
|---|
Score = 393 (143.4 bits), Expect = 4.6e-40, Sum P(2) = 4.6e-40
Identities = 95/302 (31%), Positives = 151/302 (50%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGX 293
P V +Y+L+R K +T QER+ E +LFDRL++E D + K+ I+ +++QP L
Sbjct: 35 PRVNSVYVLVRQKAGQTPQERVEEILSSKLFDRLRDENPDF-REKIIAINSELTQPKLAL 93
Query: 294 XXXXXXXXXXXXXXXXXXXXXLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
+RF+E ++DA LN+ ATR+L+ LA + L+ +HVST
Sbjct: 94 SEEDKEIIIDSTNVIFHCAATVRFNENLRDAVQLNVIATRQLILLAQQMKNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I E YPP + L ++ + + ++ L G N+Y +TKA+ E
Sbjct: 154 AYAYCNRKHIDEVVYPPPVDPKKLIDSLEWMDDGLVNDITPKLIGD-RPNTYIYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYXXXXXXXXXXXXXIHTFYAKHDKK 473
VV++ KL +A+VRPSIV ++WKEP GW +N + T A ++
Sbjct: 213 YVVQQEGAKLNVAIVRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNNAL 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITW--L 531
DL+PVDV N L W + ++ P +++ VYN + S+ P W +
Sbjct: 273 ADLVPVDVVVNTSLAAAWYSGVNR-----PRNIM---------VYNCTTGSTNPFHWGEV 318
Query: 532 EY 533
EY
Sbjct: 319 EY 320
|
|
| FB|FBgn0034145 CG5065 [Drosophila melanogaster (taxid:7227)] | Back alignment and assigned GO terms |
|---|
Score = 377 (137.8 bits), Expect = 1.5e-39, Sum P(2) = 1.5e-39
Identities = 83/261 (31%), Positives = 134/261 (51%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGX 293
PE+ IY+L+R K+ + V RL E LF+ L+ E+ L KV ISGDI+ LG
Sbjct: 150 PEIRNIYLLIRPKRGQEVSARLTELLNAPLFESLRQEKPKELS-KVIPISGDITSEELGI 208
Query: 294 XXXXXXXXXXXXXXXXXXXXXLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
++FDE ++ + T+N+ T+ L++L R L A++HVST
Sbjct: 209 SEKDQNLLCRNVSVVFHSAATVKFDEKLKLSVTINMLGTKRLVELCHRMLSLDALIHVST 268
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R D+ E Y P ++ +D+ ++ ++ L+ L+ L G N+Y+FTKA+ E
Sbjct: 269 AYCNCDRTDVSEVIYAPPYNPDDIISLINWLPEDILDQLTPRLIGK-RPNTYTFTKALAE 327
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYXXXXXXXXXXXXXIHTFYAKHDKK 473
++ K LP+A+VRPSIV ++ EP GW +N T + +
Sbjct: 328 HMLLKEAGNLPVAIVRPSIVTASLNEPFAGWVDNFNGPTGLVSALAKGMFRTMMCEKNYV 387
Query: 474 CDLIPVDVATNMMLGVVWKTA 494
D++PVD+ N+M+ W+TA
Sbjct: 388 ADMVPVDIVINLMIAAAWRTA 408
|
|
| UNIPROTKB|E1C023 FAR1 "Fatty acyl-CoA reductase 1" [Gallus gallus (taxid:9031)] | Back alignment and assigned GO terms |
|---|
Score = 387 (141.3 bits), Expect = 3.2e-39, Sum P(2) = 3.2e-39
Identities = 90/299 (30%), Positives = 151/299 (50%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGX 293
P+V +Y+L+R K +T + R+ E +LFDRL+ EQ D + K+ +I+ +++QP L
Sbjct: 35 PKVKAVYVLVRPKAGQTPEARIEEITSCKLFDRLREEQPDF-KEKIIVITSELTQPELDL 93
Query: 294 XXXXXXXXXXXXXXXXXXXXXLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
+RF+E ++DA LN+ +T++LL LA + + L+ +HVST
Sbjct: 94 SNPVKEKLIECINIIFHCAATVRFNETLRDAVQLNVLSTKQLLSLAQQMTNLEVFMHVST 153
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I+E YPP + L ++ + + ++ L G N+Y++TKA+ E
Sbjct: 154 AYAYCNRKHIEEVVYPPPVDPKKLMDSLEWMDDSLVNDITPKLIGD-RPNTYTYTKALAE 212
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYXXXXXXXXXXXXXIHTFYAKHDKK 473
VV++ +L A++RPSIV ++WKEP GW +N + T A +
Sbjct: 213 YVVQQEGARLNTAIIRPSIVGASWKEPFPGWIDNFNGPSGLFIAAGKGILRTMRASNGAV 272
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLE 532
DL+PVDV NM L W + ++ P +++ VYN + + P W E
Sbjct: 273 ADLVPVDVVVNMTLAAAWYSGVNR-----PRNIM---------VYNCTTGGTNPFHWSE 317
|
|
Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
No confident hit for EC number transfering in SWISSPROT detected by BLAST
EC Number Prediction by EFICAz Software
No EC number assignment, probably not an enzyme!
Prediction of Functionally Associated Proteins
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 596 | |||
| cd05236 | 320 | cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (F | 4e-89 | |
| pfam07993 | 245 | pfam07993, NAD_binding_4, Male sterility protein | 9e-57 | |
| PLN02996 | 491 | PLN02996, PLN02996, fatty acyl-CoA reductase | 2e-32 | |
| PLN02503 | 605 | PLN02503, PLN02503, fatty acyl-CoA reductase 2 | 5e-25 | |
| cd05263 | 293 | cd05263, MupV_like_SDR_e, Pseudomonas fluorescens | 1e-22 | |
| cd05235 | 290 | cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | 7e-14 | |
| pfam10243 | 506 | pfam10243, MIP-T3, Microtubule-binding protein MIP | 1e-12 | |
| COG0451 | 314 | COG0451, WcaG, Nucleoside-diphosphate-sugar epimer | 4e-11 | |
| TIGR01746 | 367 | TIGR01746, Thioester-redct, thioester reductase do | 6e-10 | |
| pfam10243 | 506 | pfam10243, MIP-T3, Microtubule-binding protein MIP | 8e-10 | |
| PTZ00108 | 1388 | PTZ00108, PTZ00108, DNA topoisomerase 2-like prote | 8e-10 | |
| PRK08581 | 619 | PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami | 1e-09 | |
| cd08946 | 200 | cd08946, SDR_e, extended (e) SDRs | 2e-09 | |
| COG3320 | 382 | COG3320, COG3320, Putative dehydrogenase domain of | 2e-08 | |
| PRK04195 | 482 | PRK04195, PRK04195, replication factor C large sub | 4e-08 | |
| pfam10243 | 506 | pfam10243, MIP-T3, Microtubule-binding protein MIP | 1e-07 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 2e-07 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 4e-07 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 4e-07 | |
| pfam09507 | 427 | pfam09507, CDC27, DNA polymerase subunit Cdc27 | 4e-07 | |
| pfam06375 | 561 | pfam06375, BLVR, Bovine leukaemia virus receptor ( | 6e-07 | |
| pfam04615 | 728 | pfam04615, Utp14, Utp14 protein | 8e-07 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 9e-07 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 1e-06 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 1e-06 | |
| pfam05793 | 528 | pfam05793, TFIIF_alpha, Transcription initiation f | 1e-06 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 2e-06 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 2e-06 | |
| PRK04195 | 482 | PRK04195, PRK04195, replication factor C large sub | 5e-06 | |
| pfam07423 | 214 | pfam07423, DUF1510, Protein of unknown function (D | 5e-06 | |
| pfam02463 | 1162 | pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | 5e-06 | |
| PRK04195 | 482 | PRK04195, PRK04195, replication factor C large sub | 6e-06 | |
| cd05246 | 315 | cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydra | 6e-06 | |
| pfam05793 | 528 | pfam05793, TFIIF_alpha, Transcription initiation f | 7e-06 | |
| PRK07201 | 657 | PRK07201, PRK07201, short chain dehydrogenase; Pro | 7e-06 | |
| TIGR01642 | 509 | TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, la | 8e-06 | |
| PRK05306 | 746 | PRK05306, infB, translation initiation factor IF-2 | 1e-05 | |
| PRK05306 | 746 | PRK05306, infB, translation initiation factor IF-2 | 2e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 3e-05 | |
| pfam08432 | 182 | pfam08432, DUF1742, Fungal protein of unknown func | 3e-05 | |
| PTZ00112 | 1164 | PTZ00112, PTZ00112, origin recognition complex 1 p | 3e-05 | |
| pfam07423 | 214 | pfam07423, DUF1510, Protein of unknown function (D | 4e-05 | |
| PTZ00108 | 1388 | PTZ00108, PTZ00108, DNA topoisomerase 2-like prote | 5e-05 | |
| pfam09507 | 427 | pfam09507, CDC27, DNA polymerase subunit Cdc27 | 5e-05 | |
| pfam07423 | 214 | pfam07423, DUF1510, Protein of unknown function (D | 5e-05 | |
| PTZ00112 | 1164 | PTZ00112, PTZ00112, origin recognition complex 1 p | 5e-05 | |
| PTZ00112 | 1164 | PTZ00112, PTZ00112, origin recognition complex 1 p | 5e-05 | |
| PTZ00108 | 1388 | PTZ00108, PTZ00108, DNA topoisomerase 2-like prote | 6e-05 | |
| pfam10243 | 506 | pfam10243, MIP-T3, Microtubule-binding protein MIP | 7e-05 | |
| pfam07423 | 214 | pfam07423, DUF1510, Protein of unknown function (D | 7e-05 | |
| PTZ00108 | 1388 | PTZ00108, PTZ00108, DNA topoisomerase 2-like prote | 8e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 8e-05 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 8e-05 | |
| PTZ00372 | 413 | PTZ00372, PTZ00372, endonuclease 4-like protein; P | 9e-05 | |
| PTZ00108 | 1388 | PTZ00108, PTZ00108, DNA topoisomerase 2-like prote | 1e-04 | |
| PRK05306 | 746 | PRK05306, infB, translation initiation factor IF-2 | 1e-04 | |
| pfam08432 | 182 | pfam08432, DUF1742, Fungal protein of unknown func | 1e-04 | |
| pfam05262 | 489 | pfam05262, Borrelia_P83, Borrelia P83/100 protein | 1e-04 | |
| pfam08208 | 193 | pfam08208, RNA_polI_A34, DNA-directed RNA polymera | 1e-04 | |
| PRK05901 | 509 | PRK05901, PRK05901, RNA polymerase sigma factor; P | 1e-04 | |
| PRK04195 | 482 | PRK04195, PRK04195, replication factor C large sub | 2e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 2e-04 | |
| pfam08432 | 182 | pfam08432, DUF1742, Fungal protein of unknown func | 2e-04 | |
| TIGR02794 | 346 | TIGR02794, tolA_full, TolA protein | 2e-04 | |
| PRK04195 | 482 | PRK04195, PRK04195, replication factor C large sub | 3e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 3e-04 | |
| pfam04615 | 728 | pfam04615, Utp14, Utp14 protein | 3e-04 | |
| pfam05110 | 1154 | pfam05110, AF-4, AF-4 proto-oncoprotein | 3e-04 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 4e-04 | |
| pfam05110 | 1154 | pfam05110, AF-4, AF-4 proto-oncoprotein | 4e-04 | |
| pfam08432 | 182 | pfam08432, DUF1742, Fungal protein of unknown func | 5e-04 | |
| pfam08208 | 193 | pfam08208, RNA_polI_A34, DNA-directed RNA polymera | 6e-04 | |
| pfam08208 | 193 | pfam08208, RNA_polI_A34, DNA-directed RNA polymera | 7e-04 | |
| PRK08581 | 619 | PRK08581, PRK08581, N-acetylmuramoyl-L-alanine ami | 8e-04 | |
| pfam04747 | 517 | pfam04747, DUF612, Protein of unknown function, DU | 8e-04 | |
| pfam03154 | 979 | pfam03154, Atrophin-1, Atrophin-1 family | 8e-04 | |
| PLN02967 | 581 | PLN02967, PLN02967, kinase | 8e-04 | |
| pfam09073 | 424 | pfam09073, BUD22, BUD22 | 9e-04 | |
| PTZ00108 | 1388 | PTZ00108, PTZ00108, DNA topoisomerase 2-like prote | 0.001 | |
| PTZ00121 | 2084 | PTZ00121, PTZ00121, MAEBL; Provisional | 0.001 | |
| TIGR01642 | 509 | TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, la | 0.001 | |
| PTZ00372 | 413 | PTZ00372, PTZ00372, endonuclease 4-like protein; P | 0.001 | |
| PTZ00372 | 413 | PTZ00372, PTZ00372, endonuclease 4-like protein; P | 0.001 | |
| pfam05262 | 489 | pfam05262, Borrelia_P83, Borrelia P83/100 protein | 0.001 | |
| pfam05262 | 489 | pfam05262, Borrelia_P83, Borrelia P83/100 protein | 0.001 | |
| PLN03237 | 1465 | PLN03237, PLN03237, DNA topoisomerase 2; Provision | 0.001 | |
| pfam09726 | 680 | pfam09726, Macoilin, Transmembrane protein | 0.001 | |
| TIGR01622 | 457 | TIGR01622, SF-CC1, splicing factor, CC1-like famil | 0.001 | |
| TIGR03490 | 541 | TIGR03490, Mycoplas_LppA, mycoides cluster lipopro | 0.001 | |
| PRK00247 | 429 | PRK00247, PRK00247, putative inner membrane protei | 0.001 | |
| pfam01370 | 233 | pfam01370, Epimerase, NAD dependent epimerase/dehy | 0.001 | |
| PRK04195 | 482 | PRK04195, PRK04195, replication factor C large sub | 0.002 | |
| pfam09507 | 427 | pfam09507, CDC27, DNA polymerase subunit Cdc27 | 0.002 | |
| pfam06375 | 561 | pfam06375, BLVR, Bovine leukaemia virus receptor ( | 0.002 | |
| PRK05901 | 509 | PRK05901, PRK05901, RNA polymerase sigma factor; P | 0.002 | |
| PTZ00342 | 746 | PTZ00342, PTZ00342, acyl-CoA synthetase; Provision | 0.002 | |
| PRK12585 | 197 | PRK12585, PRK12585, putative monovalent cation/H+ | 0.002 | |
| PRK13808 | 333 | PRK13808, PRK13808, adenylate kinase; Provisional | 0.002 | |
| pfam08648 | 158 | pfam08648, DUF1777, Protein of unknown function (D | 0.002 | |
| PTZ00372 | 413 | PTZ00372, PTZ00372, endonuclease 4-like protein; P | 0.003 | |
| PRK13808 | 333 | PRK13808, PRK13808, adenylate kinase; Provisional | 0.003 | |
| PLN02381 | 1066 | PLN02381, PLN02381, valyl-tRNA synthetase | 0.003 | |
| CHL00189 | 742 | CHL00189, infB, translation initiation factor 2; P | 0.003 | |
| pfam08208 | 193 | pfam08208, RNA_polI_A34, DNA-directed RNA polymera | 0.004 | |
| PLN02381 | 1066 | PLN02381, PLN02381, valyl-tRNA synthetase | 0.004 | |
| pfam05285 | 317 | pfam05285, SDA1, SDA1 | 0.004 | |
| pfam07946 | 322 | pfam07946, DUF1682, Protein of unknown function (D | 0.004 | |
| COG3566 | 379 | COG3566, COG3566, Uncharacterized protein conserve | 0.004 | |
| pfam14265 | 125 | pfam14265, DUF4355, Domain of unknown function (DU | 0.004 |
| >gnl|CDD|187547 cd05236, FAR-N_SDR_e, fatty acyl CoA reductases (FARs), extended (e) SDRs | Back alignment and domain information |
|---|
Score = 278 bits (712), Expect = 4e-89
Identities = 113/297 (38%), Positives = 167/297 (56%), Gaps = 16/297 (5%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
P++G IY+L+R K ++ +ERL E KD+LFDR +N K+ I GD+S+P+LG+
Sbjct: 25 PDIGKIYLLIRGKSGQSAEERLRELLKDKLFDRGRNLNPLFE-SKIVPIEGDLSEPNLGL 83
Query: 294 SSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353
S D Q + +++IIH AA++ FDE + +A ++N+ T LL+LA RC +LKA +HVST
Sbjct: 84 SDEDLQTLIEEVNIIIHCAATVTFDERLDEALSINVLGTLRLLELAKRCKKLKAFVHVST 143
Query: 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413
Y + R+ I+E+ YPP E L +++ + ELE + L GG + N+Y+FTKA+ E
Sbjct: 144 AYVNGDRQLIEEKVYPPPADPEKLIDILELMDDLELERATPKLLGG-HPNTYTFTKALAE 202
Query: 414 SVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473
+V K LPL +VRPSIV +T KEP GW +N GP G G++ T A +
Sbjct: 203 RLVLKERGNLPLVIVRPSIVGATLKEPFPGWIDNFNGPDGLFLAYGKGILRTMNADPNAV 262
Query: 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITW 530
D+IPVDV N +L + + + VY+ S P TW
Sbjct: 263 ADIIPVDVVANALLAAAAYSGVR--------------KPRELEVYHCGSSDVNPFTW 305
|
SDRs are Rossmann-fold NAD(P)H-binding proteins, many of which may function as fatty acyl CoA reductases (FAR), acting on medium and long chain fatty acids, and have been reported to be involved in diverse processes such as biosynthesis of insect pheromones, plant cuticular wax production, and mammalian wax biosynthesis. In Arabidopsis thaliana, proteins with this particular architecture have also been identified as the MALE STERILITY 2 (MS2) gene product, which is implicated in male gametogenesis. Mutations in MS2 inhibit the synthesis of exine (sporopollenin), rendering plants unable to reduce pollen wall fatty acids to corresponding alcohols. This N-terminal domain shares the catalytic triad (but not the upstream Asn) and characteristic NADP-binding motif of the extended SDR family. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 320 |
| >gnl|CDD|219687 pfam07993, NAD_binding_4, Male sterility protein | Back alignment and domain information |
|---|
Score = 190 bits (486), Expect = 9e-57
Identities = 80/250 (32%), Positives = 120/250 (48%), Gaps = 31/250 (12%)
Query: 239 IYILLRSKKNKTVQERLAEQF-KDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHD 297
IY L+R+K ++ ERL ++ K LFDRLK ++ ++GD+S+P+LG+S D
Sbjct: 25 IYCLVRAKDGESALERLRQELLKYGLFDRLK------ALERIIPVAGDLSEPNLGLSDED 78
Query: 298 QQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTH 357
Q + + VIIH AA++ F E D N+ TRE+L LA + + HVST Y +
Sbjct: 79 FQELAEEVDVIIHNAATVNFVEPYSDLRATNVLGTREVLRLAKQMKK-LPFHHVSTAYVN 137
Query: 358 SYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417
R + EE + E ++L G N Y+ +K + E +V
Sbjct: 138 GERGGLLEE-----------------KPYKLDEDEPALLGG--LPNGYTQSKWLAEQLVR 178
Query: 418 KYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLY-GPGGAAAGAALGLIHTFYAKHDKKCDL 476
+ LP+ + RPSI+ E GW N GP G GA LG++ D + DL
Sbjct: 179 EAAGGLPVVIYRPSIITG---ESRTGWINGDDFGPRGLLGGAGLGVLPDILGDPDARLDL 235
Query: 477 IPVDVATNMM 486
+PVD N +
Sbjct: 236 VPVDYVANAI 245
|
This family represents the C-terminal region of the male sterility protein in a number of arabidopsis and drosophila. A sequence-related jojoba acyl CoA reductase is also included. Length = 245 |
| >gnl|CDD|215538 PLN02996, PLN02996, fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Score = 130 bits (329), Expect = 2e-32
Identities = 83/289 (28%), Positives = 133/289 (46%), Gaps = 41/289 (14%)
Query: 234 PEVGGIYILLRSKKNKTVQERL-AEQFKDELFDRLKNEQAD----ILQRKVHIISGDISQ 288
P V +Y+LLR+ K+ +RL E +LF L+ + + ++ KV + GDIS
Sbjct: 36 PNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISY 95
Query: 289 PSLGIS-SHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKA 347
LG+ S+ ++ + I ++++ AA+ FDE A +N +L+ A +C ++K
Sbjct: 96 DDLGVKDSNLREEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKM 155
Query: 348 ILHVSTLYTHSYRE--------------------DIQEEFYPPLFSYEDLAHVMQTTNQE 387
+LHVST Y + DI EE E L + +
Sbjct: 156 LLHVSTAYVCGEKSGLILEKPFHMGETLNGNRKLDINEE---KKLVKEKLKE-LNEQDAS 211
Query: 388 ELEILSSM---------LFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWK 438
E EI +M L G + N+Y FTKA+GE ++ + LPL ++RP+++ ST+K
Sbjct: 212 EEEITQAMKDLGMERAKLHG--WPNTYVFTKAMGEMLLGNFKENLPLVIIRPTMITSTYK 269
Query: 439 EPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMML 487
EP GW L G G + F A + D+IP D+ N M+
Sbjct: 270 EPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMI 318
|
Length = 491 |
| >gnl|CDD|215279 PLN02503, PLN02503, fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Score = 109 bits (273), Expect = 5e-25
Identities = 89/315 (28%), Positives = 143/315 (45%), Gaps = 59/315 (18%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKD-ELFDRL-----KNEQADILQRKVHIISGDIS 287
P+VG IY+L+++K + ERL + D ELF L K+ Q+ +L + V ++ G++
Sbjct: 144 PDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVV-GNVC 202
Query: 288 QPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKA 347
+ +LG+ I + VII++AA+ FDE A +N + L+ A +C +LK
Sbjct: 203 ESNLGLEPDLADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKL 262
Query: 348 ILHVSTLYTHSYRE-------------------------------DIQEEFYPPLFSYE- 375
L VST Y + R+ DI+ E L S
Sbjct: 263 FLQVSTAYVNGQRQGRIMEKPFRMGDCIARELGISNSLPHNRPALDIEAEIKLALDSKRH 322
Query: 376 -----DLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRP 430
A M+ +L + + L+G + ++Y FTKA+GE V+ +P+ ++RP
Sbjct: 323 GFQSNSFAQKMK-----DLGLERAKLYG--WQDTYVFTKAMGEMVINSMRGDIPVVIIRP 375
Query: 431 SIVVSTWKEPIVGW--SNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLG 488
S++ STWK+P GW N + P G G + F A + D++P D+ N L
Sbjct: 376 SVIESTWKDPFPGWMEGNRMMDPIVLYYGK--GQLTGFLADPNGVLDVVPADMVVNATLA 433
Query: 489 VVWKTALDHGHVAPP 503
+ K HG A P
Sbjct: 434 AMAK----HGGAAKP 444
|
Length = 605 |
| >gnl|CDD|187573 cd05263, MupV_like_SDR_e, Pseudomonas fluorescens MupV-like, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 98.2 bits (245), Expect = 1e-22
Identities = 61/250 (24%), Positives = 99/250 (39%), Gaps = 45/250 (18%)
Query: 239 IYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQ 298
+ +L+RS+ ER+ E+A + +V ++ GD++QP+LG+S+
Sbjct: 25 VLVLVRSESLGEAHERI--------------EEAGLEADRVRVLEGDLTQPNLGLSAAAS 70
Query: 299 QFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHS 358
+ + + +IH AAS F +DA+ NI T +L+LA R + +VST Y
Sbjct: 71 RELAGKVDHVIHCAASYDFQAPNEDAWRTNIDGTEHVLELAARLDI-QRFHYVSTAYVAG 129
Query: 359 YREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418
RE E + N Y +KA E +V
Sbjct: 130 NREGNIRE----------TELNPGQN----------------FKNPYEQSKAEAEQLVRA 163
Query: 419 YLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAA-LGLIHTFYAKHDKKCDLI 477
++PL + RPSIVV K G + G A LG + +L+
Sbjct: 164 AATQIPLTVYRPSIVVGDSK---TGRIEKIDGLYELLNLLAKLGRWLPMPGNKGARLNLV 220
Query: 478 PVDVATNMML 487
PVD + ++
Sbjct: 221 PVDYVADAIV 230
|
This subgroup of extended SDR family domains have the characteristic active site tetrad and a well-conserved NAD(P)-binding motif. This subgroup is not well characterized, its members are annotated as having a variety of putative functions. One characterized member is Pseudomonas fluorescens MupV a protein involved in the biosynthesis of Mupirocin, a polyketide-derived antibiotic. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 293 |
| >gnl|CDD|187546 cd05235, SDR_e1, extended (e) SDRs, subgroup 1 | Back alignment and domain information |
|---|
Score = 71.9 bits (177), Expect = 7e-14
Identities = 56/208 (26%), Positives = 90/208 (43%), Gaps = 37/208 (17%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
V IY L+R+K + ERL + K E L +E ++ ++ GD+S+P+LG+
Sbjct: 23 KNVSKIYCLVRAKDEEAALERLIDNLK-EYGLNLWDELE---LSRIKVVVGDLSKPNLGL 78
Query: 294 SSHDQQFIQHHIHVIIHAAASL----RFDELIQDAFTLNIQATRELLDLATRCSQLKAIL 349
S D Q + + VIIH A++ ++EL N+ T+ELL LA +LK +
Sbjct: 79 SDDDYQELAEEVDVIIHNGANVNWVYPYEEL----KPANVLGTKELLKLAAT-GKLKPLH 133
Query: 350 HVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIY-NNSYSFT 408
VSTL S + N + E ML N Y +
Sbjct: 134 FVSTLSVFS----------------------AEEYNALDDEESDDMLESQNGLPNGYIQS 171
Query: 409 KAIGESVVEKYL-YKLPLAMVRPSIVVS 435
K + E ++ + LP+A++RP +
Sbjct: 172 KWVAEKLLREAANRGLPVAIIRPGNIFG 199
|
This family consists of an SDR module of multidomain proteins identified as putative polyketide sythases fatty acid synthases (FAS), and nonribosomal peptide synthases, among others. However, unlike the usual ketoreductase modules of FAS and polyketide synthase, these domains are related to the extended SDRs, and have canonical NAD(P)-binding motifs and an active site tetrad. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 290 |
| >gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3 | Back alignment and domain information |
|---|
Score = 70.3 bits (172), Expect = 1e-12
Identities = 42/210 (20%), Positives = 87/210 (41%), Gaps = 7/210 (3%)
Query: 20 KNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEK 79
++K A+ S + +K+ K + +++EKEKE+ +EK K KE+
Sbjct: 68 ESKLSSDEAVKRVEKGGSKGPAAKTKPAKEPKNESGKEEEKEKEQVKEEKKKKKEKPKEE 127
Query: 80 EKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKS-HKHKDKDRERDKDEKKEQKESK 138
KD+ +E + K EKEK+KEKK ++ + + K ++R R K K+ + K
Sbjct: 128 PKDRKPKEEAKEKRPPK-----EKEKEKEKKVEEPRDREEEKKRERVRAKSRPKKPPKKK 182
Query: 139 SSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHK 198
+K K+ + + + P ++ + K++E +S ++ +
Sbjct: 183 PPNKKKEPPEEEKQRQAAREAVKGKPEEPDVNEEREKEEDDGKDRETTTSPM-EEDESRQ 241
Query: 199 HKKKDKHGDKTNPKEKDAKSKEKESHKSSA 228
+ + + K + S + S+
Sbjct: 242 SSEISRRSSSSLKKPDPSPSMASPETRESS 271
|
This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506 |
| >gnl|CDD|223528 COG0451, WcaG, Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Score = 64.2 bits (156), Expect = 4e-11
Identities = 61/299 (20%), Positives = 100/299 (33%), Gaps = 72/299 (24%)
Query: 253 ERLAEQFKD-ELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHA 311
ERL D DRL + D L V + D++ L + + +IH
Sbjct: 18 ERLLAAGHDVRGLDRL-RDGLDPLLSGVEFVVLDLTDRDL-----VDELAKGVPDAVIHL 71
Query: 312 AASLRFDELI----QDAFTLNIQATRELLDLATRCSQLKAILHVST---LYTHSYREDIQ 364
AA + + +N+ T LL+ A R + +K + S+ +Y I
Sbjct: 72 AAQSSVPDSNASDPAEFLDVNVDGTLNLLEAA-RAAGVKRFVFASSVSVVYGDPPPLPID 130
Query: 365 EEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY--LYK 422
E+ PP N Y +K E ++ Y LY
Sbjct: 131 EDLGPPRP-----------------------------LNPYGVSKLAAEQLLRAYARLYG 161
Query: 423 LPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVA 482
LP+ ++RP N+YGPG + G++ F + K +I +
Sbjct: 162 LPVVILRPF---------------NVYGPGD-KPDLSSGVVSAFIRQLLKGEPIIVIGGD 205
Query: 483 TNMMLGVVWKTALDHGHVAPPASLVAP-IPRTDPPVYNLSISSSYPITWLEYMNSVQAA 540
+ D +V A + + D V+N+ S + IT E +V A
Sbjct: 206 GSQ--------TRDFVYVDDVADALLLALENPDGGVFNIG-SGTAEITVRELAEAVAEA 255
|
Length = 314 |
| >gnl|CDD|233557 TIGR01746, Thioester-redct, thioester reductase domain | Back alignment and domain information |
|---|
Score = 60.9 bits (148), Expect = 6e-10
Identities = 41/205 (20%), Positives = 81/205 (39%), Gaps = 40/205 (19%)
Query: 232 CYPEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSL 291
+ L+R+ + ERL E + D+ + ++ +++GD+S+P L
Sbjct: 21 RRSTQAKVICLVRAASEEHAMERLREALRSYRL-----WHEDLARERIEVVAGDLSEPRL 75
Query: 292 GISSHDQQFIQHHIHVIIHAAASLRF----DELIQDAFTLNIQATRELLDLATRCSQLKA 347
G+S + + + ++ I+H A + + EL N+ TRE+L LA + K
Sbjct: 76 GLSDAEWERLAENVDTIVHNGALVNWVYPYSELRGA----NVLGTREVLRLAAS-GRAKP 130
Query: 348 ILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYN-NSYS 406
+ +VST+ + T E+ ++ Y+
Sbjct: 131 LHYVSTI-------SVGAAIDLS-------------TVTEDDATVT----PPPGLAGGYA 166
Query: 407 FTKAIGESVVEKY-LYKLPLAMVRP 430
+K + E +V + LP+ +VRP
Sbjct: 167 QSKWVAELLVREASDRGLPVTIVRP 191
|
This model includes the terminal domain from the fungal alpha aminoadipate reductase enzyme (also known as aminoadipate semialdehyde dehydrogenase) which is involved in the biosynthesis of lysine , as well as the reductase-containing component of the myxochelin biosynthetic gene cluster, MxcG. The mechanism of reduction involves activation of the substrate by adenylation and transfer to a covalently-linked pantetheine cofactor as a thioester. This thioester is then reduced to give an aldehyde (thus releasing the product) and a regenerated pantetheine thiol. (In myxochelin biosynthesis this aldehyde is further reduced to an alcohol or converted to an amine by an aminotransferase.) This is a fundamentally different reaction than beta-ketoreductase domains of polyketide synthases which act at a carbonyl two carbons removed from the thioester and forms an alcohol as a product. This domain is invariably found at the C-terminus of the proteins which contain it (presumably because it results in the release of the product). The majority of hits to this model are non-ribosomal peptide synthetases in which this domain is similarly located proximal to a thiolation domain (pfam00550). In some cases this domain is found at the end of a polyketide synthetase enzyme, but is unlike ketoreductase domains which are found before the thiolase domains. Exceptions to this observed relationship with the thiolase domain include three proteins which consist of stand-alone reductase domains (GP|466833 from M. leprae, GP|435954 from Anabaena and OMNI|NTL02SC1199 from Strep. coelicolor) and one protein (OMNI|NTL01NS2636 from Nostoc) which contains N-terminal homology with a small group of hypothetical proteins but no evidence of a thiolation domain next to the putative reductase domain. Below the noise cutoff to this model are proteins containing more distantly related ketoreductase and dehydratase/epimerase domains. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. Length = 367 |
| >gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3 | Back alignment and domain information |
|---|
Score = 61.1 bits (148), Expect = 8e-10
Identities = 37/144 (25%), Positives = 72/144 (50%), Gaps = 1/144 (0%)
Query: 46 SSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEK 105
K++ K+K KEKEKEK+ K+ ++ +EK++++V +K + +K K K + +KE
Sbjct: 132 KPKEEAKEKRPPKEKEKEKE-KKVEEPRDREEEKKRERVRAKSRPKKPPKKKPPNKKKEP 190
Query: 106 KKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPP 165
+E+K ++ K K E D +E++E++E + ++S ++ + S IS
Sbjct: 191 PEEEKQRQAAREAVKGKPEEPDVNEEREKEEDDGKDRETTTSPMEEDESRQSSEISRRSS 250
Query: 166 PAPTPTQKSPVKTKEKEKEKESST 189
+ SP + +E T
Sbjct: 251 SSLKKPDPSPSMASPETRESSKRT 274
|
This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506 |
| >gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
Score = 61.6 bits (150), Expect = 8e-10
Identities = 45/198 (22%), Positives = 82/198 (41%), Gaps = 2/198 (1%)
Query: 34 TSSSTSNPTNSSSSKKDKKDKDRD-KEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERK 92
S +S + K K ++ K+K+ +K +SK + D+ + +
Sbjct: 1155 EQRLKSKTKGKASKLRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPD 1214
Query: 93 ESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKE 152
K S S++E +E+K K +KS + K ++ + + E + SS +
Sbjct: 1215 NKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNA 1274
Query: 153 PASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPK 212
P S + PPPP+ P +S +K K+ + S KKK K KT K
Sbjct: 1275 PKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARK 1334
Query: 213 EKDAKSKEKESHKSSAGP 230
+K +K++ K++ S +
Sbjct: 1335 KK-SKTRVKQASASQSSR 1351
|
Length = 1388 |
| >gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated | Back alignment and domain information |
|---|
Score = 60.6 bits (147), Expect = 1e-09
Identities = 38/238 (15%), Positives = 79/238 (33%), Gaps = 21/238 (8%)
Query: 4 SVKSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKE 63
K S++ +++H S N D+ S S T + +N S+ DKK D
Sbjct: 30 PQKDSTAKTTSHDSKKSNDDETSKDTSSKDTDKADNN-NTSNQDNNDKKFSTIDSSTSDS 88
Query: 64 KKDKEKDKSAVSSKEKEKDK-----------------VSSKEKERKESKPKESSSEKEKK 106
+ + + + + + + + +S +
Sbjct: 89 NNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDISDYEQPRNSEKSTND 148
Query: 107 KEKKDKKEKSHKHKDKDRERDK-DEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPP 165
K + + ++DK D +K + + + NS +P +Q + P
Sbjct: 149 SNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNSPKPTQPNQ-SNSQPA 207
Query: 166 PAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHK-KKDKHGDKTNPKEKDAKSKEKE 222
T QKS K + + + D++S+ K +KD K + + +K +
Sbjct: 208 SDDTANQKSSSKDNQSMSDSALDSILDQYSEDAKKTQKDYASQSKKDKTETSNTKNPQ 265
|
Length = 619 |
| >gnl|CDD|212494 cd08946, SDR_e, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 57.3 bits (139), Expect = 2e-09
Identities = 33/178 (18%), Positives = 59/178 (33%), Gaps = 53/178 (29%)
Query: 307 VIIHAAASLRFDELIQDA---FTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDI 363
V++H AA + + F N+ T LL+ A + +K ++ S+ + E +
Sbjct: 33 VVVHLAALVGVPASWDNPDEDFETNVVGTLNLLEAARKAG-VKRFVYASSASVYGSPEGL 91
Query: 364 QEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--Y 421
EE P + Y +K E ++ Y Y
Sbjct: 92 PEEEETPPRP----------------------------LSPYGVSKLAAEHLLRSYGESY 123
Query: 422 KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFY--AKHDKKCDLI 477
LP+ ++R + N+YGPG G+++ F A K +
Sbjct: 124 GLPVVILRLA---------------NVYGPGQRPRLD--GVVNDFIRRALEGKPLTVF 164
|
Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 200 |
| >gnl|CDD|225857 COG3320, COG3320, Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 2e-08
Identities = 42/198 (21%), Positives = 81/198 (40%), Gaps = 27/198 (13%)
Query: 239 IYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQ 298
+ L+R++ ++ RL + F L ++ +V +++GD+++P LG+S
Sbjct: 28 VICLVRAQSDEAALARLEKTF------DLYRHWDELSADRVEVVAGDLAEPDLGLSERTW 81
Query: 299 QFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHS 358
Q + ++ +IIH AA + + N+ T E+L LA + K + +VS++
Sbjct: 82 QELAENVDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAAT-GKPKPLHYVSSI---- 136
Query: 359 YREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV-E 417
+ E Y + EI + G Y +K + E +V E
Sbjct: 137 ---SVGETEYY------------SNFTVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVRE 181
Query: 418 KYLYKLPLAMVRPSIVVS 435
LP+ + RP +
Sbjct: 182 AGDRGLPVTIFRPGYITG 199
|
Length = 382 |
| >gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
Score = 55.7 bits (135), Expect = 4e-08
Identities = 26/75 (34%), Positives = 49/75 (65%)
Query: 42 TNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSS 101
T S + K K EK++E++ KEK K A + K+KE+++ KEK+ +E + +E +
Sbjct: 403 TGSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEKEEEEEEA 462
Query: 102 EKEKKKEKKDKKEKS 116
E+EK++E++ KK+++
Sbjct: 463 EEEKEEEEEKKKKQA 477
|
Length = 482 |
| >gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3 | Back alignment and domain information |
|---|
Score = 54.1 bits (130), Expect = 1e-07
Identities = 37/229 (16%), Positives = 77/229 (33%), Gaps = 9/229 (3%)
Query: 16 PSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVS 75
P K K++ P ++++K ++R + K + KK +K
Sbjct: 128 PKDRKPKEEAKEKRPPKEKEKEKEKKVEEPRDREEEKKRERVRAKSRPKKPPKKKPPNKK 187
Query: 76 SKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKK---------EKSHKHKDKDRER 126
+ E++K +E + KP+E +E++KE+ D K E+ + + R
Sbjct: 188 KEPPEEEKQRQAAREAVKGKPEEPDVNEEREKEEDDGKDRETTTSPMEEDESRQSSEISR 247
Query: 127 DKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKE 186
++ + S + +SK + + PP P + +P + K KE
Sbjct: 248 RSSSSLKKPDPSPSMASPETRESSKRTETRPRTSLRPPSARPASARPAPPRVKRKEIVTV 307
Query: 187 SSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSSAGPKCYPE 235
+ + + E ++ AG + E
Sbjct: 308 LQDAQGVGKIVSNVILEGKKSEDEDDENFVVEAAAQAPDIVAGGEDEAE 356
|
This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 54.0 bits (129), Expect = 2e-07
Identities = 37/179 (20%), Positives = 78/179 (43%), Gaps = 2/179 (1%)
Query: 49 KDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKE 108
+ + E E ++ E + +K+ D K +E+K++ + +E++KKK
Sbjct: 1348 AKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKA 1407
Query: 109 KKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAP 168
+ KK + K K + ++ +EKK+ E+K ++ + +K+ A ++ A
Sbjct: 1408 DELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAE 1467
Query: 169 TPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSS 227
+ K K +E +K K ++ KK D+ K+K ++K+ E K +
Sbjct: 1468 EAKKADEAKKKAEEAKKADEAK--KKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKA 1524
|
Length = 2084 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (127), Expect = 4e-07
Identities = 35/182 (19%), Positives = 77/182 (42%), Gaps = 14/182 (7%)
Query: 51 KKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKE-KERKESKPKESSSEKEKKKEK 109
KK +++ K E +KK +E K+ + K+ E+ K + K++ E K + + K + +
Sbjct: 1296 KKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAA 1355
Query: 110 KDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPT 169
D+ E + + + ++ ++ KK+ +K ++ + +K+ A +
Sbjct: 1356 ADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDK----------- 1404
Query: 170 PTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSSAG 229
+ +K K+K K K + K ++ K +AK K +E+ K+
Sbjct: 1405 -KKADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAK-KADEAKKKAEEAKKAEEA 1462
Query: 230 PK 231
K
Sbjct: 1463 KK 1464
|
Length = 2084 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 53.2 bits (127), Expect = 4e-07
Identities = 37/186 (19%), Positives = 85/186 (45%), Gaps = 6/186 (3%)
Query: 46 SSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEK 105
+ +K K D+ + K +E +K D+ K K+ +E K + K++ E K + + K +
Sbjct: 1298 AEEKKKADEAKKKAEEAKKADEAKKKA------EEAKKKADAAKKKAEEAKKAAEAAKAE 1351
Query: 106 KKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPP 165
+ D+ E + + + ++ ++ KK+ +K ++ + +K+ A + +
Sbjct: 1352 AEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELK 1411
Query: 166 PAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHK 225
A +K+ K+ E++K++ K + K + K + K ++AK K +E+ K
Sbjct: 1412 KAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKK 1471
Query: 226 SSAGPK 231
+ K
Sbjct: 1472 ADEAKK 1477
|
Length = 2084 |
| >gnl|CDD|220271 pfam09507, CDC27, DNA polymerase subunit Cdc27 | Back alignment and domain information |
|---|
Score = 52.1 bits (125), Expect = 4e-07
Identities = 30/196 (15%), Positives = 74/196 (37%), Gaps = 6/196 (3%)
Query: 6 KSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKK 65
S S K +D+S +T+ T T+ ++ + + K
Sbjct: 167 PPKSIMSPEVKVKSAKKTQDTS---KETTTEKTEGKTSVKAASLKRNPPKKSNIMSSFFK 223
Query: 66 DKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRE 125
K K+K + K S+E+ K E S + ++ + +++ ++
Sbjct: 224 KKTKEKKEKKEASESTVKEESEEESGKRDVILEDESAEPTGLDEDEDEDEPKPSGERSDS 283
Query: 126 RDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEK 185
++ E+KE+++ K K++ +E + P + + P K++E+++
Sbjct: 284 EEETEEKEKEKRKRLKKMMEDEDEDEEMEIVPES---PVEEEESEEPEPPPLPKKEEEKE 340
Query: 186 ESSTTHDKHSKHKHKK 201
E + + D + ++
Sbjct: 341 EVTVSPDGGRRRGRRR 356
|
This protein forms the C subunit of DNA polymerase delta. It carries the essential residues for binding to the Pol1 subunit of polymerase alpha, from residues 293-332, which are characterized by the motif D--G--VT, referred to as the DPIM motif. The first 160 residues of the protein form the minimal domain for binding to the B subunit, Cdc1, of polymerase delta, the final 10 C-terminal residues, 362-372, being the DNA sliding clamp, PCNA, binding motif. Length = 427 |
| >gnl|CDD|115057 pfam06375, BLVR, Bovine leukaemia virus receptor (BLVR) | Back alignment and domain information |
|---|
Score = 52.0 bits (124), Expect = 6e-07
Identities = 47/181 (25%), Positives = 76/181 (41%), Gaps = 10/181 (5%)
Query: 41 PTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESS 100
P N+ S +D KD + DK S +K ++ +SK E+ + E
Sbjct: 139 PENALPSDEDDKDPNDPYRALDIDLDKPLADSEKLPVQKHRNAETSKSPEKGDVPAVEKK 198
Query: 101 SEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLI 160
S+K KKKEKK+K+ +ERDKD+KKE + KS + S S + +
Sbjct: 199 SKKPKKKEKKEKE----------KERDKDKKKEVEGFKSLLLALDDSPASAASVAEADEA 248
Query: 161 SHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKE 220
S + T P + K+ E E+ + K K + +K++K K + + S
Sbjct: 249 SLANTVSGTAPDSEPDEPKDAEAEETKKSPKHKKKKQRKEKEEKKKKKKHHHHRCHHSDG 308
Query: 221 K 221
Sbjct: 309 G 309
|
This family consists of several bovine specific leukaemia virus receptors which are thought to function as transmembrane proteins, although their exact function is unknown. Length = 561 |
| >gnl|CDD|218177 pfam04615, Utp14, Utp14 protein | Back alignment and domain information |
|---|
Score = 51.6 bits (124), Expect = 8e-07
Identities = 38/182 (20%), Positives = 71/182 (39%), Gaps = 16/182 (8%)
Query: 43 NSSSSKKDKKDKD---RDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKES 99
+ + KK++ D + +E E E++ E++ S K + K + E++ K
Sbjct: 381 RAEARKKEENDAEIEELRRELEGEEESDEEENEEPSKKNVGRRKFGPENGEKEAESKKLK 440
Query: 100 SSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQL 159
K + KEKK+ E+ +++ + +K K K S+ + K +E
Sbjct: 441 KENKNEFKEKKESDEEEELEDEEEAKVEKVANKLLKRSEKAQKEEEEEELDEE------- 493
Query: 160 ISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSK 219
P T K+++ +K+SS+ DK + K K K KEK
Sbjct: 494 -----NPWLKTTSSVGKSAKKQDSKKKSSSKLDKAANKISKAAVKVK-KKKKKEKSIDLD 547
Query: 220 EK 221
+
Sbjct: 548 DD 549
|
This protein is found to be part of a large ribonucleoprotein complex containing the U3 snoRNA. Depletion of the Utp proteins impedes production of the 18S rRNA, indicating that they are part of the active pre-rRNA processing complex. This large RNP complex has been termed the small subunit (SSU) processome. Length = 728 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (123), Expect = 9e-07
Identities = 38/185 (20%), Positives = 78/185 (42%), Gaps = 2/185 (1%)
Query: 49 KDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKE 108
++KK D K+ E++KK E K A +K+ ++ K ++E ++K K+ + E +K E
Sbjct: 1287 EEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAE 1346
Query: 109 KKDKKEKSHKHKDKDRERDK--DEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPP 166
+ ++ + + E EKK+++ K + + K+ +
Sbjct: 1347 AAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKK 1406
Query: 167 APTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKS 226
A + + K K E +K++ K ++ K D+ K ++AK E+ K+
Sbjct: 1407 ADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKA 1466
Query: 227 SAGPK 231
K
Sbjct: 1467 EEAKK 1471
|
Length = 2084 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (123), Expect = 1e-06
Identities = 42/175 (24%), Positives = 79/175 (45%), Gaps = 10/175 (5%)
Query: 51 KKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKK 110
KK ++ + E+ KK +E+ K K+KE ++ E+ +K + + + +E KK ++
Sbjct: 1613 KKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENKIKAAEEAKKAEE 1672
Query: 111 DKKEKSHKHKDKDRERDKDE--KKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAP 168
DKK+ K ++ E+ E KKE +E+K + ++ K+ A +
Sbjct: 1673 DKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKAEELK--------KA 1724
Query: 169 TPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKES 223
K + +KE E++ + + KKK H K K+ + KEKE+
Sbjct: 1725 EEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEEIRKEKEA 1779
|
Length = 2084 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 51.7 bits (123), Expect = 1e-06
Identities = 36/193 (18%), Positives = 79/193 (40%), Gaps = 11/193 (5%)
Query: 44 SSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEK 103
+ ++KK ++ + E K + + D++ + ++ E + +E ++K K+ + EK
Sbjct: 1331 ADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEK 1390
Query: 104 EK-----KKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQ 158
+K KK ++DKK K + ++ KK+ E+K ++ + +K+ A ++
Sbjct: 1391 KKADEAKKKAEEDKK------KADELKKAAAAKKKADEAKKKAEEKKKADEAKKKAEEAK 1444
Query: 159 LISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKS 218
A + K K +E +K K + K ++ K +AK
Sbjct: 1445 KADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKK 1504
Query: 219 KEKESHKSSAGPK 231
+ K+ K
Sbjct: 1505 AAEAKKKADEAKK 1517
|
Length = 2084 |
| >gnl|CDD|218752 pfam05793, TFIIF_alpha, Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) | Back alignment and domain information |
|---|
Score = 51.1 bits (122), Expect = 1e-06
Identities = 43/182 (23%), Positives = 64/182 (35%), Gaps = 13/182 (7%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKK 107
K K+ E E+ + EK K KD E + ES ++EK K
Sbjct: 183 MKAAKNGPAAFGDEDEETEGEKGGGGRGKDLKIKDLEGDDEDDGDESDKGGEDGDEEKSK 242
Query: 108 EKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSK---------IVSSSHNSKEPASGSQ 158
+KK K K+ K D D++ + + E S I SS + +P
Sbjct: 243 KKKKKLAKNKKKLDDDKKGKRGGDDDADEYDSDDGDDEGREEDYISDSSASGNDPEERED 302
Query: 159 LISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKS 218
+S P P Q +E E+E + SK K K G K + D+ S
Sbjct: 303 KLSPEIPAKPEIEQDE----DSEESEEEKNEEEGGLSKKGKKLKKLKGKKNGLDKDDSDS 358
Query: 219 KE 220
+
Sbjct: 359 GD 360
|
Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) or RNA polymerase II-associating protein 74 (RAP74) is the large subunit of transcription factor IIF (TFIIF), which is essential for accurate initiation and stimulates elongation by RNA polymerase II. Length = 528 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 51.3 bits (122), Expect = 2e-06
Identities = 44/220 (20%), Positives = 96/220 (43%), Gaps = 4/220 (1%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKK 107
+ ++ + ++K++E K K + ++K+ D+ K +E K+ + + KKK
Sbjct: 1360 EAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKK 1419
Query: 108 EKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPA 167
+ KK+ K K + ++ +E K+ E+K ++ + +K+ A ++ A
Sbjct: 1420 ADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKA 1479
Query: 168 PTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSS 227
+ K K +E +K++ + + KKK K +K ++K+ E K +
Sbjct: 1480 EEAKKADEAKKKAEEAKKKAD---EAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKA 1536
Query: 228 AGPKCYPEVGGIYILLRSKKNKTVQE-RLAEQFKDELFDR 266
K E L ++++ K +E + AE+ K D+
Sbjct: 1537 DEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDK 1576
|
Length = 2084 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 50.9 bits (121), Expect = 2e-06
Identities = 42/183 (22%), Positives = 82/183 (44%), Gaps = 3/183 (1%)
Query: 51 KKDKDRDKEKEKEKKDKEKDKSAVSSKEK--EKDKVSSKEKERKESKPKESSSEKEKKKE 108
KK ++ K E +KK +E K A ++K+K E K + K E+ E+ + +EK +
Sbjct: 1309 KKAEEAKKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEKAEA 1368
Query: 109 KKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAP 168
+ KKE++ K D +++ +++KK + K + + + K+ A+ + A
Sbjct: 1369 AEKKKEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAE 1428
Query: 169 TPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSSA 228
+ K K +E +K K ++ K ++ K +AK K +E+ K+
Sbjct: 1429 EKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAK-KADEAKKKAEEAKKADE 1487
Query: 229 GPK 231
K
Sbjct: 1488 AKK 1490
|
Length = 2084 |
| >gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 5e-06
Identities = 21/82 (25%), Positives = 52/82 (63%), Gaps = 3/82 (3%)
Query: 57 DKEKE---KEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKK 113
++E E KK +K K V EK++++ ++K++ + K+ E+E+K++K+++K
Sbjct: 396 EEEIEFLTGSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEK 455
Query: 114 EKSHKHKDKDRERDKDEKKEQK 135
E+ + ++++E ++++KK+Q
Sbjct: 456 EEEEEEAEEEKEEEEEKKKKQA 477
|
Length = 482 |
| >gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510) | Back alignment and domain information |
|---|
Score = 47.4 bits (113), Expect = 5e-06
Identities = 21/87 (24%), Positives = 42/87 (48%), Gaps = 4/87 (4%)
Query: 50 DKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEK 109
D+ E+E +K D ++ KE+EK+ +S++KE K KE +E+ +E+
Sbjct: 39 SPSDQAAADEQEAKKSDDQETAEIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEEE 98
Query: 110 KDKKEKSHKHKDKDRERDKDEKKEQKE 136
++ +++ +K E +KE
Sbjct: 99 DEESSD----ENEKETEEKTESNVEKE 121
|
This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214 |
| >gnl|CDD|217051 pfam02463, SMC_N, RecF/RecN/SMC N terminal domain | Back alignment and domain information |
|---|
Score = 49.2 bits (117), Expect = 5e-06
Identities = 34/231 (14%), Positives = 84/231 (36%), Gaps = 31/231 (13%)
Query: 43 NSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSE 102
+ + ++ +KE+E + +++K K+ +++++ KE +E K + E
Sbjct: 248 RDEQEEIESSKQELEKEEEILAQVLKENKEEEKEKKLQEEELKLLAKEEEELKSELLKLE 307
Query: 103 --KEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLI 160
K +EK + EK K +K+ +++K+E +E ++ +I + +E
Sbjct: 308 RRKVDDEEKLKESEKELKKLEKELKKEKEEIEELEKELKELEIKREAEEEEE-------- 359
Query: 161 SHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKE 220
Q ++ K ++ E+E S+ ++ K ++ K +
Sbjct: 360 ----------EQLEKLQEKLEQLEEELLAKKKLESERLSSAAKLKEEELELKNEEEKEAK 409
Query: 221 KESHKSSAGPKCYPEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQ 271
S L ++ K + + E + + K +
Sbjct: 410 LLLELSE-----------QEEDLLKEEKKEELKIVEELEESLETKQGKLTE 449
|
This domain is found at the N terminus of SMC proteins. The SMC (structural maintenance of chromosomes) superfamily proteins have ATP-binding domains at the N- and C-termini, and two extended coiled-coil domains separated by a hinge in the middle. The eukaryotic SMC proteins form two kind of heterodimers: the SMC1/SMC3 and the SMC2/SMC4 types. These heterodimers constitute an essential part of higher order complexes, which are involved in chromatin and DNA dynamics. This family also includes the RecF and RecN proteins that are involved in DNA metabolism and recombination. Length = 1162 |
| >gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 6e-06
Identities = 21/76 (27%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 41 PTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESS 100
T +K +K R++EK+++KK K +E+EK+K KE ++ + +E +
Sbjct: 408 ATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEK-----KEEEKEEEEEEA 462
Query: 101 SEKEKKKEKKDKKEKS 116
E+++++E+K KK+ +
Sbjct: 463 EEEKEEEEEKKKKQAT 478
|
Length = 482 |
| >gnl|CDD|187557 cd05246, dTDP_GD_SDR_e, dTDP-D-glucose 4,6-dehydratase, extended (e) SDRs | Back alignment and domain information |
|---|
Score = 48.3 bits (116), Expect = 6e-06
Identities = 43/176 (24%), Positives = 62/176 (35%), Gaps = 52/176 (29%)
Query: 282 ISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAF---TLNIQATRELLDL 338
+ GDI L D+ F + I +IH AA D I D N+ T LL+
Sbjct: 56 VKGDICDAEL----VDRLFEEEKIDAVIHFAAESHVDRSISDPEPFIRTNVLGTYTLLEA 111
Query: 339 ATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFG 398
A + + +H+ST +E Y L + E L+
Sbjct: 112 ARKYGVKR-FVHIST-----------DEVYGDLLDDGEF---------TETSPLAP---- 146
Query: 399 GIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPG 452
+ YS +KA + +V Y Y LP+ + R SNN YGP
Sbjct: 147 ---TSPYSASKAAADLLVRAYHRTYGLPVVITRC--------------SNN-YGPY 184
|
This subgroup contains dTDP-D-glucose 4,6-dehydratase and related proteins, members of the extended-SDR family, with the characteristic Rossmann fold core region, active site tetrad and NAD(P)-binding motif. dTDP-D-glucose 4,6-dehydratase is closely related to other sugar epimerases of the SDR family. dTDP-D-dlucose 4,6,-dehydratase catalyzes the second of four steps in the dTDP-L-rhamnose pathway (the dehydration of dTDP-D-glucose to dTDP-4-keto-6-deoxy-D-glucose) in the synthesis of L-rhamnose, a cell wall component of some pathogenic bacteria. In many gram negative bacteria, L-rhamnose is an important constituent of lipopoylsaccharide O-antigen. The larger N-terminal portion of dTDP-D-Glucose 4,6-dehydratase forms a Rossmann fold NAD-binding domain, while the C-terminus binds the sugar substrate. Extended SDRs are distinct from classical SDRs. In addition to the Rossmann fold (alpha/beta folding pattern with a central beta-sheet) core region typical of all SDRs, extended SDRs have a less conserved C-terminal extension of approximately 100 amino acids. Extended SDRs are a diverse collection of proteins, and include isomerases, epimerases, oxidoreductases, and lyases; they typically have a TGXXGXXG cofactor binding motif. SDRs are a functionally diverse family of oxidoreductases that have a single domain with a structurally conserved Rossmann fold, an NAD(P)(H)-binding region, and a structurally diverse C-terminal region. Sequence identity between different SDR enzymes is typically in the 15-30% range; they catalyze a wide range of activities including the metabolism of steroids, cofactors, carbohydrates, lipids, aromatic compounds, and amino acids, and act in redox sensing. Classical SDRs have an TGXXX[AG]XG cofactor binding motif and a YXXXK active site motif, with the Tyr residue of the active site motif serving as a critical catalytic residue (Tyr-151, human 15-hydroxyprostaglandin dehydrogenase numbering). In addition to the Tyr and Lys, there is often an upstream Ser and/or an Asn, contributing to the active site; while substrate binding is in the C-terminal region, which determines specificity. The standard reaction mechanism is a 4-pro-S hydride transfer and proton relay involving the conserved Tyr and Lys, a water molecule stabilized by Asn, and nicotinamide. Atypical SDRs generally lack the catalytic residues characteristic of the SDRs, and their glycine-rich NAD(P)-binding motif is often different from the forms normally seen in classical or extended SDRs. Complex (multidomain) SDRs such as ketoreductase domains of fatty acid synthase have a GGXGXXG NAD(P)-binding motif and an altered active site motif (YXXXN). Fungal type ketoacyl reductases have a TGXXXGX(1-2)G NAD(P)-binding motif. Length = 315 |
| >gnl|CDD|218752 pfam05793, TFIIF_alpha, Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 7e-06
Identities = 47/247 (19%), Positives = 81/247 (32%), Gaps = 25/247 (10%)
Query: 6 KSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDK-EKEKEK 64
K + N KK K+ D D E + +
Sbjct: 217 DLEGDDEDDGDESDKGGEDGDEEKSKKKKKKLAKNKKKLDDDKKGKRGGDDDADEYDSDD 276
Query: 65 KDKE-------KDKSAVSSKEKEKDKVSSKEKERK--------------ESKPKESSSEK 103
D E D SA + +E++ S E K E +E K
Sbjct: 277 GDDEGREEDYISDSSASGNDPEEREDKLSPEIPAKPEIEQDEDSEESEEEKNEEEGGLSK 336
Query: 104 EKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHP 163
+ KK KK K +K+ KD D + + S S + + KEP + S+P
Sbjct: 337 KGKKLKKLKGKKNGLDKDDSDSGDDSDDSDIDGEDSVSLVTAK--KQKEPKKEEPVDSNP 394
Query: 164 PPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKK-KDKHGDKTNPKEKDAKSKEKE 222
P + + ++K+K K K ++ + KK K ++ K++ + ++
Sbjct: 395 SSPGNSGPARPSPESKDKGKRKAANEVSKSPASVPAKKLKTENAPKSSSGKSTPQTFSGS 454
Query: 223 SHKSSAG 229
S+A
Sbjct: 455 KSSSNAA 461
|
Transcription initiation factor IIF, alpha subunit (TFIIF-alpha) or RNA polymerase II-associating protein 74 (RAP74) is the large subunit of transcription factor IIF (TFIIF), which is essential for accurate initiation and stimulates elongation by RNA polymerase II. Length = 528 |
| >gnl|CDD|235962 PRK07201, PRK07201, short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 48.8 bits (117), Expect = 7e-06
Identities = 39/142 (27%), Positives = 60/142 (42%), Gaps = 31/142 (21%)
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGI 293
+++L+R + RL DR V + GD+++P LG+
Sbjct: 24 RREATVHVLVR----RQSLSRLEALAAYWGADR------------VVPLVGDLTEPGLGL 67
Query: 294 SSHDQQFIQHHIHVIIHAAA--SLRFDELIQDAFTLNIQATRELLDLATRCSQLKAIL-- 349
S D + I ++H AA L DE Q A N+ TR +++LA R L+A
Sbjct: 68 SEADIAELG-DIDHVVHLAAIYDLTADEEAQRA--ANVDGTRNVVELAER---LQAATFH 121
Query: 350 HVST-----LYTHSYREDIQEE 366
HVS+ Y +RED +E
Sbjct: 122 HVSSIAVAGDYEGVFREDDFDE 143
|
Length = 657 |
| >gnl|CDD|233503 TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, large subunit, splicing factor | Back alignment and domain information |
|---|
Score = 48.4 bits (115), Expect = 8e-06
Identities = 19/122 (15%), Positives = 57/122 (46%), Gaps = 11/122 (9%)
Query: 52 KDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKER--------KESKPKESSSEK 103
+D++ D+E+EK + +++D+S+ + + +D+ +++ R ++S+P++
Sbjct: 1 RDEEPDREREK-SRGRDRDRSSERPRRRSRDRSRFRDRHRRSRERSYREDSRPRDRRRYD 59
Query: 104 EKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHP 163
+ + + + +D+ R R + + ++ + + S S+ ++ L
Sbjct: 60 SRSP-RSLRYSSVRRSRDRPRRRSRSVRSIEQH-RRRLRDRSPSNQWRKDDKKRSLWDIK 117
Query: 164 PP 165
PP
Sbjct: 118 PP 119
|
These splicing factors consist of an N-terminal arginine-rich low complexity domain followed by three tandem RNA recognition motifs (pfam00076). The well-characterized members of this family are auxilliary components of the U2 small nuclear ribonuclearprotein splicing factor (U2AF). These proteins are closely related to the CC1-like subfamily of splicing factors (TIGR01622). Members of this subfamily are found in plants, metazoa and fungi. Length = 509 |
| >gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated | Back alignment and domain information |
|---|
Score = 47.9 bits (115), Expect = 1e-05
Identities = 19/159 (11%), Positives = 59/159 (37%), Gaps = 1/159 (0%)
Query: 47 SKKDKKDKDRDKEKEKEKK-DKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEK 105
+K+ EK KE + + S V +E K++ + +E +++ +E+++ + +
Sbjct: 10 AKELGVSSKELLEKLKELGIEVKSHSSTVEEEEARKEEAKREAEEEAKAEAEEAAAAEAE 69
Query: 106 KKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPP 165
++ K + + + + + E +++ +++ K + + P
Sbjct: 70 EEAKAEAAAAAPAEEAAEAAAAAEAAARPAEDEAARPAEAAARRPKAKKAAKKKKGPKPK 129
Query: 166 PAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDK 204
+ + + K + + + K KK+
Sbjct: 130 KKKPKRKAARGGKRGKGGKGRRRRRGRRRRRKKKKKQKP 168
|
Length = 746 |
| >gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated | Back alignment and domain information |
|---|
Score = 47.5 bits (114), Expect = 2e-05
Identities = 26/178 (14%), Positives = 56/178 (31%), Gaps = 13/178 (7%)
Query: 53 DKDRDKEKEKEKKDKEKD-----KSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKK 107
K R E KE K+ K + V +E ++E+K + K + +
Sbjct: 2 SKVRVYELAKELGVSSKELLEKLKELGIEVKSHSSTVEEEEARKEEAKREAEEEAKAEAE 61
Query: 108 EKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPA 167
E + + + +E E + ++ + ++
Sbjct: 62 EAAAAEAEEEAKAEAAAAAPAEEAAEAAAAAEAAARPAEDEAARPAE--------AAARR 113
Query: 168 PTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHK 225
P + + K K K+K+ + K K + + + + K K+K + K
Sbjct: 114 PKAKKAAKKKKGPKPKKKKPKRKAARGGKRGKGGKGRRRRRGRRRRRKKKKKQKPTEK 171
|
Length = 746 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 47.1 bits (111), Expect = 3e-05
Identities = 27/149 (18%), Positives = 76/149 (51%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKK 107
KK +++ +E +K +++K K+ + K +E +K +++ +++ + K++ K+K+
Sbjct: 1653 KKAEEENKIKAAEEAKKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEA 1712
Query: 108 EKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPA 167
E+K K E+ K +++++ + ++ KKE +E K ++ K+ + +
Sbjct: 1713 EEKKKAEELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDEEEKKKIAHLKKEEEKKAEE 1772
Query: 168 PTPTQKSPVKTKEKEKEKESSTTHDKHSK 196
+++ ++ + E++++ DK K
Sbjct: 1773 IRKEKEAVIEEELDEEDEKRRMEVDKKIK 1801
|
Length = 2084 |
| >gnl|CDD|219838 pfam08432, DUF1742, Fungal protein of unknown function (DUF1742) | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 3e-05
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 2/65 (3%)
Query: 51 KKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKK 110
KK K+ +E EK KK+ E+ + K+K K K K+K+ K+ K+ SEK+ +KE +
Sbjct: 62 KKKKELAEEIEKVKKEYEEKQKWKWKKKKSKKK-KDKDKD-KKDDKKDDKSEKKDEKEAE 119
Query: 111 DKKEK 115
DK E
Sbjct: 120 DKLED 124
|
This is a family of fungal proteins of unknown function. Length = 182 |
| >gnl|CDD|240274 PTZ00112, PTZ00112, origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
Score = 46.9 bits (111), Expect = 3e-05
Identities = 35/146 (23%), Positives = 57/146 (39%), Gaps = 24/146 (16%)
Query: 3 YSVKSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRD----- 57
+++ SSSSSS + + + S+ TS + + SS K K+
Sbjct: 120 HNLDSSSSSSISSSL-------TNISFFSSPTSIYSCLSNSLSSKHSPKVIKENQSTHVN 172
Query: 58 -----KEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDK 112
+ KE +K+ K + DK+ + K + KEK KEK
Sbjct: 173 ISSDNSPRNKEISNKQLKKQTNVTHTTCYDKMRRSPRNTSTIKNNTNDKNKEKNKEKD-- 230
Query: 113 KEKSHKHKDKDRERDKDEKKEQKESK 138
K+ KDR+ DK K+ ++SK
Sbjct: 231 -----KNIKKDRDGDKQTKRNSEKSK 251
|
Length = 1164 |
| >gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510) | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 4e-05
Identities = 21/84 (25%), Positives = 40/84 (47%)
Query: 21 NKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKE 80
+ D +A S T K+++ + + E +++K D EK+ + +E
Sbjct: 38 SSPSDQAAADEQEAKKSDDQETAEIEEVKEEEKEAANSEDKEDKGDAEKEDEESEEENEE 97
Query: 81 KDKVSSKEKERKESKPKESSSEKE 104
+D+ SS E E++ + ES+ EKE
Sbjct: 98 EDEESSDENEKETEEKTESNVEKE 121
|
This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214 |
| >gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
Score = 46.2 bits (110), Expect = 5e-05
Identities = 28/205 (13%), Positives = 61/205 (29%), Gaps = 2/205 (0%)
Query: 55 DRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKE 114
+ +EKE K+ + K K+ + + K K++++K+ + S + K
Sbjct: 1145 EEVEEKEIAKEQRLKSKTKGKASKLRK-PKLKKKEKKKKKSSADKSKKASVVGNSKRVDS 1203
Query: 115 KSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKS 174
+ D + K + + +S + + S
Sbjct: 1204 DEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSD 1263
Query: 175 PVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDA-KSKEKESHKSSAGPKCY 233
+ + K K + ++S K+ K K K K+ + S
Sbjct: 1264 DLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRLEGSLAALKK 1323
Query: 234 PEVGGIYILLRSKKNKTVQERLAEQ 258
+ + K V++ A Q
Sbjct: 1324 KKKSEKKTARKKKSKTRVKQASASQ 1348
|
Length = 1388 |
| >gnl|CDD|220271 pfam09507, CDC27, DNA polymerase subunit Cdc27 | Back alignment and domain information |
|---|
Score = 45.6 bits (108), Expect = 5e-05
Identities = 40/222 (18%), Positives = 70/222 (31%), Gaps = 21/222 (9%)
Query: 4 SVKSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKE 63
+ + K ++ S+ S + K KK +D KE E
Sbjct: 135 VKRRTGVGLPPVAPAASPALKPTANGKRPSSKPPKSIMSPEVKVKSAKKTQDTSKETTTE 194
Query: 64 KKDKEKDKSAVSSKEKEKDKV-------SSKEKERKESKPKESSSEKEKKKEKKDKKEKS 116
K + + A S K K K KE+KE K S+ KE+ +E+ K++
Sbjct: 195 KTEGKTSVKAASLKRNPPKKSNIMSSFFKKKTKEKKEKKEASESTVKEESEEESGKRDVI 254
Query: 117 HKHK-----DKDRERDKDEKKEQKESKSSSKIVSSSHNSKE-----PASGS----QLISH 162
+ + D + D+DE K E S + K ++
Sbjct: 255 LEDESAEPTGLDEDEDEDEPKPSGERSDSEEETEEKEKEKRKRLKKMMEDEDEDEEMEIV 314
Query: 163 PPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDK 204
P P + P +KE+E + + + +
Sbjct: 315 PESPVEEEESEEPEPPPLPKKEEEKEEVTVSPDGGRRRGRRR 356
|
This protein forms the C subunit of DNA polymerase delta. It carries the essential residues for binding to the Pol1 subunit of polymerase alpha, from residues 293-332, which are characterized by the motif D--G--VT, referred to as the DPIM motif. The first 160 residues of the protein form the minimal domain for binding to the B subunit, Cdc1, of polymerase delta, the final 10 C-terminal residues, 362-372, being the DNA sliding clamp, PCNA, binding motif. Length = 427 |
| >gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510) | Back alignment and domain information |
|---|
Score = 44.3 bits (105), Expect = 5e-05
Identities = 22/120 (18%), Positives = 49/120 (40%), Gaps = 6/120 (5%)
Query: 33 STSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERK 92
S+ S + + K D ++ +E ++E+K+ A +S++KE + KE E
Sbjct: 38 SSPSDQAAADEQEAKKSDDQETAEIEEVKEEEKE------AANSEDKEDKGDAEKEDEES 91
Query: 93 ESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKE 152
E + +E E + EK+ +++ + + ++ + S S + E
Sbjct: 92 EEENEEEDEESSDENEKETEEKTESNVEKEITNPSWKPVGTEQTGPHAMTFDSGSQDWNE 151
|
This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214 |
| >gnl|CDD|240274 PTZ00112, PTZ00112, origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 5e-05
Identities = 48/232 (20%), Positives = 88/232 (37%), Gaps = 20/232 (8%)
Query: 3 YSVKSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEK 62
YS S+S SS SP K+ S+ + SS ++P N S K K +
Sbjct: 147 YSCLSNSLSSKH--SPKVIKENQSTHV----NISSDNSPRNKEISNKQLKKQTNVTHTTC 200
Query: 63 EKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDK 122
K + ++ + K DK K KE+ ++ K+ +K+ K+ +K + + H D
Sbjct: 201 YDKMRRSPRNTSTIKNNTNDKNKEKNKEKDKNIKKDRDGDKQTKR-NSEKSKVQNSHFDV 259
Query: 123 ------DRERDKDEKKEQKESKSSSKIVSSSHN-SKEPASGSQLISHPPPPAPTPTQKSP 175
+E KDEK +SS + S K+ S P
Sbjct: 260 RILRSYTKENKKDEKNVVSGIRSSVLLKRKSQCLRKDSYVYSNHQKKAKTGDPKNIIHRN 319
Query: 176 VKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSS 227
+ + SS+ H ++ ++ + ++P +K +K + K++
Sbjct: 320 NGSSNSNNDDTSSSNHLGSNRISNR------NPSSPYKKQTTTKHTNNTKNN 365
|
Length = 1164 |
| >gnl|CDD|240274 PTZ00112, PTZ00112, origin recognition complex 1 protein; Provisional | Back alignment and domain information |
|---|
Score = 46.1 bits (109), Expect = 5e-05
Identities = 56/269 (20%), Positives = 108/269 (40%), Gaps = 32/269 (11%)
Query: 7 SSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKE--- 63
SS +S +K K ++ +T +P N+S+ K + DK+++K KEK+
Sbjct: 174 SSDNSPRNKEISNKQLKKQTNVTHTTCYDKMRRSPRNTSTIKNNTNDKNKEKNKEKDKNI 233
Query: 64 KKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEK-----------KKEKKDK 112
KKD++ DK + EK K + S + S KE+ +++ K++ +
Sbjct: 234 KKDRDGDKQTKRNSEKSKVQNSHFDVRILRSYTKENKKDEKNVVSGIRSSVLLKRKSQCL 293
Query: 113 KEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQ 172
++ S+ + + ++ + K + S ++ S GS IS+ P +P
Sbjct: 294 RKDSYVYSNHQKKAKTGDPKNIIHRNNGSSNSNNDDTSSSNHLGSNRISNRNPSSP---- 349
Query: 173 KSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSSAGPKC 232
+K+++T H ++K+ K K K N + + K +SS P
Sbjct: 350 ----------YKKQTTTKHTNNTKNNKYNKTKTTQKFNHPLRHHATINK---RSSMLP-M 395
Query: 233 YPEVGGIYILLRSKKNKTVQERLAEQFKD 261
+ G + E +A+ KD
Sbjct: 396 SEQKGRGASEKSEYIKEFTMEEVAKLTKD 424
|
Length = 1164 |
| >gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
Score = 45.8 bits (109), Expect = 6e-05
Identities = 33/194 (17%), Positives = 63/194 (32%), Gaps = 11/194 (5%)
Query: 4 SVKSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSS-SSKKDKKDKDRDKEKEK 62
SV +S + + D+ S+ + + K+ K + K
Sbjct: 1193 SVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDDEEQKTKPKKSSVKRLKSKKNNSSK 1252
Query: 63 EKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDK 122
+D ++ S SKE + + + S P S + + K K
Sbjct: 1253 SSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKK 1312
Query: 123 DRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQ---LISHPPPPAPTPTQKSPVKTK 179
E K++K+S+ + S + AS SQ L+ P +K +
Sbjct: 1313 RLEGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRLLRRPR-------KKKSDSSS 1365
Query: 180 EKEKEKESSTTHDK 193
E + + E + D+
Sbjct: 1366 EDDDDSEVDDSEDE 1379
|
Length = 1388 |
| >gnl|CDD|220648 pfam10243, MIP-T3, Microtubule-binding protein MIP-T3 | Back alignment and domain information |
|---|
Score = 45.3 bits (107), Expect = 7e-05
Identities = 26/161 (16%), Positives = 63/161 (39%), Gaps = 18/161 (11%)
Query: 71 KSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDE 130
K A S ++ ++ K K +++ K + K+++++ + K++ +++ +
Sbjct: 65 KCAESKLSSDEAVKRVEKGGSKGPAAKTKPAKEPKNESGKEEEKEKEQVKEEKKKKKEKP 124
Query: 131 KKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKESSTT 190
K+E K+ K + PP +K + +++E+EK+
Sbjct: 125 KEEPKDRKPKEEAKEKR---------------PPKEKEKEKEKKVEEPRDREEEKKRERV 169
Query: 191 HDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSSAGPK 231
K K KK KE + K++++ + + K
Sbjct: 170 RAKSRPKKPPKKKP---PNKKKEPPEEEKQRQAAREAVKGK 207
|
This protein, which interacts with both microtubules and TRAF3 (tumour necrosis factor receptor-associated factor 3), is conserved from worms to humans. The N-terminal region is the microtubule binding domain and is well-conserved; the C-terminal 100 residues, also well-conserved, constitute the coiled-coil region which binds to TRAF3. The central region of the protein is rich in lysine and glutamic acid and carries KKE motifs which may also be necessary for tubulin-binding, but this region is the least well-conserved. Length = 506 |
| >gnl|CDD|219408 pfam07423, DUF1510, Protein of unknown function (DUF1510) | Back alignment and domain information |
|---|
Score = 44.0 bits (104), Expect = 7e-05
Identities = 23/84 (27%), Positives = 38/84 (45%), Gaps = 1/84 (1%)
Query: 31 STSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKE 90
S S ++ S ++ + + KE+EKE + E DK EKE ++ + +E
Sbjct: 39 SPSDQAAADEQEAKKSDDQETAEIEEVKEEEKEAANSE-DKEDKGDAEKEDEESEEENEE 97
Query: 91 RKESKPKESSSEKEKKKEKKDKKE 114
E E+ E E+K E +KE
Sbjct: 98 EDEESSDENEKETEEKTESNVEKE 121
|
This family consists of several hypothetical bacterial proteins of around 200 residues in length. The function of this family is unknown. Length = 214 |
| >gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
Score = 45.4 bits (108), Expect = 8e-05
Identities = 23/137 (16%), Positives = 49/137 (35%), Gaps = 9/137 (6%)
Query: 1 MAYSVKSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEK 60
+ + +A + S+ + +S + KK KK
Sbjct: 1261 SSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRPDGESNGGSKPSSPTKKKVKKRL-EGSLA 1319
Query: 61 EKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHK 120
+KK K + K+A K SK + ++ S + S + +K+K D +
Sbjct: 1320 ALKKKKKSEKKTA--------RKKKSKTRVKQASASQSSRLLRRPRKKKSDSSSEDDDDS 1371
Query: 121 DKDRERDKDEKKEQKES 137
+ D D+D++ ++ +
Sbjct: 1372 EVDDSEDEDDEDDEDDD 1388
|
Length = 1388 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (107), Expect = 8e-05
Identities = 45/216 (20%), Positives = 94/216 (43%), Gaps = 3/216 (1%)
Query: 47 SKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKES-KPKESSSEKEK 105
++ KK D K+K +EKK ++ K +K+ D++ +K++ + K+ + EK+K
Sbjct: 1373 KEEAKKKADAAKKKAEEKKKADEAKKKAEEDKKKADELKKAAAAKKKADEAKKKAEEKKK 1432
Query: 106 KKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSK-EPASGSQLISHPP 164
E K K E++ K + ++ ++ +K E+ + K+ + K E A +
Sbjct: 1433 ADEAKKKAEEAKKADEAKKKAEEAKKAEEAKKKAEEAKKADEAKKKAEEAKKADEAKKKA 1492
Query: 165 PPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESH 224
A ++ + K+K E+ + + KK ++ K+ + K K E
Sbjct: 1493 EEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKADEAKKAEEKKKADELK 1552
Query: 225 KSSAGPKCYPEVGGIYILLRSKKNKTVQERLAEQFK 260
K+ K E +++++K + R AE+ K
Sbjct: 1553 KAEELKKA-EEKKKAEEAKKAEEDKNMALRKAEEAK 1587
|
Length = 2084 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (107), Expect = 8e-05
Identities = 47/255 (18%), Positives = 102/255 (40%), Gaps = 17/255 (6%)
Query: 22 KDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEK 81
+++++ I + ++ K ++ K + +K +EKK ++ K A K+ ++
Sbjct: 1247 EERNNEEIRKFEEARMAHFARRQAAIKAEEARKADELKKAEEKKKADEAKKAEEKKKADE 1306
Query: 82 DKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKD----KDRERDKDEKKEQKES 137
K ++E +K + K+ + E +KK + KK + K + E DE + +E
Sbjct: 1307 AKKKAEEA-KKADEAKKKAEEAKKKADAAKKKAEEAKKAAEAAKAEAEAAADEAEAAEEK 1365
Query: 138 KSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKH 197
+++ K A+ + A + K K +E +K++ +
Sbjct: 1366 AEAAEKKKEEAKKKADAAKKK--------AEEKKKADEAKKKAEEDKKKADELKKAAAAK 1417
Query: 198 KHKKKDKHGDKTNPKEKDAKSKEKESHKSSAGPKCYPEVGGIYILLRSKKNKTVQERLAE 257
K + K + K +AK K +E+ K+ K E K K + + A+
Sbjct: 1418 KKADEAKKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKA----EEAKKKAEEAKKAD 1473
Query: 258 QFKDELFDRLKNEQA 272
+ K + + K ++A
Sbjct: 1474 EAKKKAEEAKKADEA 1488
|
Length = 2084 |
| >gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional | Back alignment and domain information |
|---|
Score = 44.7 bits (106), Expect = 9e-05
Identities = 30/132 (22%), Positives = 51/132 (38%), Gaps = 8/132 (6%)
Query: 12 SSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDK 71
S + K+K + S I S S + S + K+K+++K ++ K K
Sbjct: 10 SFFSGTTQKSKLQPISYIYSNVLVLSKEILSTFSEEENKVATTSTKKDKKEDKNNESKKK 69
Query: 72 SAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEK 131
S K+K++ K E E K + K+ K K+K K K + + K
Sbjct: 70 SEKKKKKKKEKKEPKSEGETKL--------GFKTPKKSKKTKKKPPKPKPNEDVDNAFNK 121
Query: 132 KEQKESKSSSKI 143
+ KS+ I
Sbjct: 122 IAELAEKSNVYI 133
|
Length = 413 |
| >gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
Score = 45.0 bits (107), Expect = 1e-04
Identities = 38/179 (21%), Positives = 72/179 (40%), Gaps = 4/179 (2%)
Query: 47 SKKDKKDKDRDKEKEKEKKD---KEKDK-SAVSSKEKEKDKVSSKEKERKESKPKESSSE 102
++ +KK+K+ +K K KD ++ DK +++E ++ +++R +SK K +S+
Sbjct: 1109 AELEKKEKELEKLKNTTPKDMWLEDLDKFEEALEEQEEVEEKEIAKEQRLKSKTKGKASK 1168
Query: 103 KEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISH 162
K K KK +K+K DK ++ ++ +S K+ N K +SGS
Sbjct: 1169 LRKPKLKKKEKKKKKSSADKSKKASVVGNSKRVDSDEKRKLDDKPDNKKSNSSGSDQEDD 1228
Query: 163 PPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEK 221
+K +SS +D+ S K+ K + S
Sbjct: 1229 EEQKTKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPP 1287
|
Length = 1388 |
| >gnl|CDD|235401 PRK05306, infB, translation initiation factor IF-2; Validated | Back alignment and domain information |
|---|
Score = 44.8 bits (107), Expect = 1e-04
Identities = 23/166 (13%), Positives = 63/166 (37%), Gaps = 1/166 (0%)
Query: 49 KDKKDKDRDKEKEKEKKDKEKDKSAVSS-KEKEKDKVSSKEKERKESKPKESSSEKEKKK 107
+ + EK K+ + KS S+ +E+E K +K + +E+K + + + +
Sbjct: 10 AKELGVSSKELLEKLKELGIEVKSHSSTVEEEEARKEEAKREAEEEAKAEAEEAAAAEAE 69
Query: 108 EKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPA 167
E+ + + ++ E + + ++ + + + + A + P P
Sbjct: 70 EEAKAEAAAAAPAEEAAEAAAAAEAAARPAEDEAARPAEAAARRPKAKKAAKKKKGPKPK 129
Query: 168 PTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKE 213
++ + ++ K + + + KKK + + P+E
Sbjct: 130 KKKPKRKAARGGKRGKGGKGRRRRRGRRRRRKKKKKQKPTEKIPRE 175
|
Length = 746 |
| >gnl|CDD|219838 pfam08432, DUF1742, Fungal protein of unknown function (DUF1742) | Back alignment and domain information |
|---|
Score = 43.1 bits (102), Expect = 1e-04
Identities = 23/77 (29%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 45 SSSKKDKKDKDR---DKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSS 101
KK+ ++K + K+K K+KKDK+KDK +K + K + +++ E K S
Sbjct: 72 EKVKKEYEEKQKWKWKKKKSKKKKDKDKDKKDDKKDDKSEKKDEKEAEDKLEDLTKSYSE 131
Query: 102 EKEKKKEKKDKKEKSHK 118
E K +K HK
Sbjct: 132 TLSTLSELKPRKYALHK 148
|
This is a family of fungal proteins of unknown function. Length = 182 |
| >gnl|CDD|114011 pfam05262, Borrelia_P83, Borrelia P83/100 protein | Back alignment and domain information |
|---|
Score = 44.6 bits (105), Expect = 1e-04
Identities = 27/95 (28%), Positives = 46/95 (48%), Gaps = 5/95 (5%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKK 107
+D DK RD+ ++K+++ K K A +S KE +V+ +K E E KK
Sbjct: 239 AQDNADKQRDEVRQKQQEAKNLPKPADTSSPKEDKQVAENQKREIEKAQIEI-----KKN 293
Query: 108 EKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSK 142
+++ K K HK D +E EK+ + + + K
Sbjct: 294 DEEALKAKDHKAFDLKQESKASEKEAEDKELEAQK 328
|
This family consists of several Borrelia P83/P100 antigen proteins. Length = 489 |
| >gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34 | Back alignment and domain information |
|---|
Score = 42.8 bits (101), Expect = 1e-04
Identities = 23/61 (37%), Positives = 33/61 (54%), Gaps = 2/61 (3%)
Query: 75 SSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQ 134
S KE E E +E K K+ +KE KKEKK+KK+K K + + K +KK++
Sbjct: 135 SEKETTAKVEKEAEVEEEEKKEKKK--KKEVKKEKKEKKDKKEKMVEPKGSKKKKKKKKK 192
Query: 135 K 135
K
Sbjct: 193 K 193
|
5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193 |
| >gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 1e-04
Identities = 26/171 (15%), Positives = 52/171 (30%), Gaps = 14/171 (8%)
Query: 2 AYSVKSSSSSSSAHPSPHKNKDKDSSAIP--STSTSSSTSNPTNSSSSKKDKKDKDRDKE 59
+ + A S K ++ + S + + KK K
Sbjct: 29 SKGFITKEEIKEALESKKKTPEQIDQVLIFLSGMVKDTDDATESDIPKKKTKTAAKAAAA 88
Query: 60 KEKEKK------DKEKDKSAVSSKEKEKDKVSSKEKERKESKPK------ESSSEKEKKK 107
K KK D K ++ +K+ D K+ + + + +
Sbjct: 89 KAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVKDIDVLNQADDDDDDDDDDDLDDDDID 148
Query: 108 EKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQ 158
+ D ++ D D + + +EKKE KE + S + + + Q
Sbjct: 149 DDDDDEDDDEDDDDDDVDDEDEEKKEAKELEKLSDDDDFVWDEDDSEALRQ 199
|
Length = 509 |
| >gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
Score = 43.8 bits (104), Expect = 2e-04
Identities = 20/82 (24%), Positives = 45/82 (54%), Gaps = 3/82 (3%)
Query: 61 EKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHK 120
E+E + K A +K K V EK+R+E K ++ KK++++++E+ K +
Sbjct: 396 EEEIEFLTGSKKA---TKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKE 452
Query: 121 DKDRERDKDEKKEQKESKSSSK 142
++ E +++ ++E++E + K
Sbjct: 453 EEKEEEEEEAEEEKEEEEEKKK 474
|
Length = 482 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (103), Expect = 2e-04
Identities = 43/241 (17%), Positives = 90/241 (37%), Gaps = 19/241 (7%)
Query: 43 NSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSE 102
+ ++ K D K+K +E K ++ K +K+ D+ + +K++ + + E
Sbjct: 1461 EAKKKAEEAKKADEAKKKAEEAKKADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEE 1520
Query: 103 KEKKKE--KKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEP------- 153
+K E K ++ +K+ + K + ++ DE K+ +E K + + + K
Sbjct: 1521 AKKADEAKKAEEAKKADEAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMAL 1580
Query: 154 --ASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNP 211
A ++ + K K +E +K K +++ K ++
Sbjct: 1581 RKAEEAKKAEEARIEEVMKLYEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKK 1640
Query: 212 KEKDAKSKEKESHKSSAGPKCYPEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQ 271
KE + K K +E K+ K K ++ AE+ K D K +
Sbjct: 1641 KEAEEKKKAEELKKAEEENKIKAA--------EEAKKAEEDKKKAEEAKKAEEDEKKAAE 1692
Query: 272 A 272
A
Sbjct: 1693 A 1693
|
Length = 2084 |
| >gnl|CDD|219838 pfam08432, DUF1742, Fungal protein of unknown function (DUF1742) | Back alignment and domain information |
|---|
Score = 42.0 bits (99), Expect = 2e-04
Identities = 23/85 (27%), Positives = 41/85 (48%), Gaps = 6/85 (7%)
Query: 70 DKSAVSSKEKEK---DKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRER 126
D +K+K+K +++ +KE +E + + +K KKK+ KDK +K K DK
Sbjct: 54 DAEYTEAKKKKKELAEEIEKVKKEYEEKQKWKWKKKKSKKKKDKDKDKKDDKKDDKS--- 110
Query: 127 DKDEKKEQKESKSSSKIVSSSHNSK 151
+K ++KE ++ S S
Sbjct: 111 EKKDEKEAEDKLEDLTKSYSETLST 135
|
This is a family of fungal proteins of unknown function. Length = 182 |
| >gnl|CDD|234017 TIGR02794, tolA_full, TolA protein | Back alignment and domain information |
|---|
Score = 43.3 bits (102), Expect = 2e-04
Identities = 18/91 (19%), Positives = 49/91 (53%), Gaps = 1/91 (1%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKK 107
+ ++ +K R E+ ++K+ +++ + ++K+ E+ ++EK+++ + K E K
Sbjct: 76 QAEEAEKQRAAEQARQKELEQRAAAEKAAKQAEQAAKQAEEKQKQAEEAKA-KQAAEAKA 134
Query: 108 EKKDKKEKSHKHKDKDRERDKDEKKEQKESK 138
+ + + EK K + K + ++ + K E+K
Sbjct: 135 KAEAEAEKKAKEEAKKQAEEEAKAKAAAEAK 165
|
TolA couples the inner membrane complex of itself with TolQ and TolR to the outer membrane complex of TolB and OprL (also called Pal). Most of the length of the protein consists of low-complexity sequence that may differ in both length and composition from one species to another, complicating efforts to discriminate TolA (the most divergent gene in the tol-pal system) from paralogs such as TonB. Selection of members of the seed alignment and criteria for setting scoring cutoffs are based largely conserved operon struction. //The Tol-Pal complex is required for maintaining outer membrane integrity. Also involved in transport (uptake) of colicins and filamentous DNA, and implicated in pathogenesis. Transport is energized by the proton motive force. TolA is an inner membrane protein that interacts with periplasmic TolB and with outer membrane porins ompC, phoE and lamB [Transport and binding proteins, Other, Cellular processes, Pathogenesis]. Length = 346 |
| >gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
Score = 43.4 bits (103), Expect = 3e-04
Identities = 15/77 (19%), Positives = 41/77 (53%)
Query: 66 DKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRE 125
+E+ + SK+ K EK K+ + ++ +K+ KK ++E+ + + K+ E
Sbjct: 395 TEEEIEFLTGSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEE 454
Query: 126 RDKDEKKEQKESKSSSK 142
++++E++ ++E + +
Sbjct: 455 KEEEEEEAEEEKEEEEE 471
|
Length = 482 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 44.0 bits (103), Expect = 3e-04
Identities = 37/174 (21%), Positives = 81/174 (46%), Gaps = 3/174 (1%)
Query: 49 KDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKE 108
+D K + K+ E+ KKD E+ K A +E+ +++ E+ R + ++ K ++
Sbjct: 1221 EDAKKAEAVKKAEEAKKDAEEAKKA--EEERNNEEIRKFEEARMAHFARRQAAIKAEEAR 1278
Query: 109 KKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPA-SGSQLISHPPPPA 167
K D+ +K+ + K D + +EKK+ E+K ++ + +K+ A + A
Sbjct: 1279 KADELKKAEEKKKADEAKKAEEKKKADEAKKKAEEAKKADEAKKKAEEAKKKADAAKKKA 1338
Query: 168 PTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEK 221
+ + E E + + ++ ++ KKK++ K + +K A+ K+K
Sbjct: 1339 EEAKKAAEAAKAEAEAAADEAEAAEEKAEAAEKKKEEAKKKADAAKKKAEEKKK 1392
|
Length = 2084 |
| >gnl|CDD|218177 pfam04615, Utp14, Utp14 protein | Back alignment and domain information |
|---|
Score = 43.5 bits (103), Expect = 3e-04
Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 1/145 (0%)
Query: 7 SSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKD 66
S + PS + + S + + K+KK+ D ++E E E++
Sbjct: 406 ESDEEENEEPSKKNVGRRKFGPENGEKEAESKKLKKENKNEFKEKKESDEEEELEDEEEA 465
Query: 67 KEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRER 126
K + + K EK + +E+E E P + K K + K D+
Sbjct: 466 KVEKVANKLLKRSEKAQKEEEEEELDEENP-WLKTTSSVGKSAKKQDSKKKSSSKLDKAA 524
Query: 127 DKDEKKEQKESKSSSKIVSSSHNSK 151
+K K K K K S +
Sbjct: 525 NKISKAAVKVKKKKKKEKSIDLDDD 549
|
This protein is found to be part of a large ribonucleoprotein complex containing the U3 snoRNA. Depletion of the Utp proteins impedes production of the 18S rRNA, indicating that they are part of the active pre-rRNA processing complex. This large RNP complex has been termed the small subunit (SSU) processome. Length = 728 |
| >gnl|CDD|218440 pfam05110, AF-4, AF-4 proto-oncoprotein | Back alignment and domain information |
|---|
Score = 43.8 bits (103), Expect = 3e-04
Identities = 51/252 (20%), Positives = 82/252 (32%), Gaps = 34/252 (13%)
Query: 4 SVKSSSSSSSAHPS-------PHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDR 56
S S S + P +K+ S A T S+ + + SK R
Sbjct: 625 SSSSDSPEDESLPPSSQSPGNTESSKE--SCASLRTPVCRSSVG-SQNDLSKDRLLSPMR 681
Query: 57 DKEKEKEKKDKEKDK-----------SAVSSKEKEKDKVSSKEKERKESKP-KESSSEKE 104
+ E +D E+ S + +K ++ S P K++S
Sbjct: 682 ETELLSPLRDSEERYSLWVKIDLDLLSRIPGHPYKKGVPPKPAEKDSLSAPKKQTSKTAS 741
Query: 105 KKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHP- 163
+K K K+ KHK+ + + KK++ E KSSS SSS + +S +
Sbjct: 742 EKSSSKGKR----KHKNDEEADKIESKKQRLEEKSSSCSPSSSSSHHHSSSNKESRKSSR 797
Query: 164 -------PPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDA 216
P P+ + SP K S K K++ K
Sbjct: 798 NKEEEMLPSPSSPLSSSSPKPEHPSRKRPRRQEDTSSSSGPFSASSTKSSSKSSSTSKHR 857
Query: 217 KSKEKESHKSSA 228
K++ K S S
Sbjct: 858 KTEGKGSSTSKE 869
|
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila. Length = 1154 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 43.2 bits (101), Expect = 4e-04
Identities = 51/226 (22%), Positives = 91/226 (40%), Gaps = 28/226 (12%)
Query: 46 SSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEK 105
+ +K K D+ + K +E +K D+ K K+ + K +E K E+ +K + K+ + E +K
Sbjct: 1427 AEEKKKADEAKKKAEEAKKADEAKKKAEEAKKAEEAKK--KAEEAKKADEAKKKAEEAKK 1484
Query: 106 KKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPP 165
E K K E++ K D+ ++ + +KK + K+ + E A +
Sbjct: 1485 ADEAKKKAEEAKKKADEAKKAAEAKKKADEAKKAEEAKKADEAKKAEEAKKAD------- 1537
Query: 166 PAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHK 225
+K+ K K E +K + K + K DK K ++K+ E +
Sbjct: 1538 ----EAKKAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEAR 1593
Query: 226 SSAGPKCYPEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQ 271
K Y E KK K AE+ K ++K E+
Sbjct: 1594 IEEVMKLYEE---------EKKMK------AEEAKKAEEAKIKAEE 1624
|
Length = 2084 |
| >gnl|CDD|218440 pfam05110, AF-4, AF-4 proto-oncoprotein | Back alignment and domain information |
|---|
Score = 43.0 bits (101), Expect = 4e-04
Identities = 48/188 (25%), Positives = 70/188 (37%), Gaps = 30/188 (15%)
Query: 12 SSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDK 71
P K +KDS + P TS + S ++S +K K D++ DK + K+++ +EK
Sbjct: 714 PYKKGVPPKPAEKDSLSAPKKQTSKTASEKSSSKGKRKHKNDEEADKIESKKQRLEEKSS 773
Query: 72 S-----AVSSKEKEKDKVSSKEKERKESK----PKESSSEKEKKKEKKDKKEK------- 115
S + S +K S K KE + P S K E +K
Sbjct: 774 SCSPSSSSSHHHSSSNKESRKSSRNKEEEMLPSPSSPLSSSSPKPEHPSRKRPRRQEDTS 833
Query: 116 ---------SHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPP 166
S K K K K E K S +S + SS ++ AS S P PP
Sbjct: 834 SSSGPFSASSTKSSSKSSSTSKHRKTEGKGSSTSKEHKGSSGDTPNKAS-----SFPVPP 888
Query: 167 APTPTQKS 174
+ K
Sbjct: 889 LSNGSSKP 896
|
This family consists of AF4 (Proto-oncogene AF4) and FMR2 (Fragile X E mental retardation syndrome) nuclear proteins. These proteins have been linked to human diseases such as acute lymphoblastic leukaemia and mental retardation. The family also contains a Drosophila AF4 protein homologue Lilliputian which contains an AT-hook domain. Lilliputian represents a novel pair-rule gene that acts in cytoskeleton regulation, segmentation and morphogenesis in Drosophila. Length = 1154 |
| >gnl|CDD|219838 pfam08432, DUF1742, Fungal protein of unknown function (DUF1742) | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 5e-04
Identities = 24/86 (27%), Positives = 44/86 (51%), Gaps = 9/86 (10%)
Query: 58 KEKEKEKKDKE-KDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKS 116
+ E +KK KE ++ KE E+ + K K +K+ K+ +K+KK +KKD K
Sbjct: 56 EYTEAKKKKKELAEEIEKVKKEYEEKQ---KWKWKKKKSKKKKDKDKDKKDDKKDDKS-- 110
Query: 117 HKHKDKDRERDKDEKKEQKESKSSSK 142
+ KD + +D+ ++ +S S +
Sbjct: 111 ---EKKDEKEAEDKLEDLTKSYSETL 133
|
This is a family of fungal proteins of unknown function. Length = 182 |
| >gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34 | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 6e-04
Identities = 20/65 (30%), Positives = 34/65 (52%)
Query: 78 EKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKES 137
+ + + EKE KE+ E+E+KKEKK KKE + K+K +++K + + +
Sbjct: 126 SELGSESETSEKETTAKVEKEAEVEEEEKKEKKKKKEVKKEKKEKKDKKEKMVEPKGSKK 185
Query: 138 KSSSK 142
K K
Sbjct: 186 KKKKK 190
|
5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193 |
| >gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34 | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 7e-04
Identities = 27/72 (37%), Positives = 40/72 (55%), Gaps = 7/72 (9%)
Query: 44 SSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEK 103
S S+ +K+ EKE E +++EK KEK+K K KEK+ K+ K ++ K
Sbjct: 129 GSESETSEKETTAKVEKEAEVEEEEK-------KEKKKKKEVKKEKKEKKDKKEKMVEPK 181
Query: 104 EKKKEKKDKKEK 115
KK+KK KK+K
Sbjct: 182 GSKKKKKKKKKK 193
|
5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193 |
| >gnl|CDD|236304 PRK08581, PRK08581, N-acetylmuramoyl-L-alanine amidase; Validated | Back alignment and domain information |
|---|
Score = 42.1 bits (99), Expect = 8e-04
Identities = 23/200 (11%), Positives = 68/200 (34%), Gaps = 3/200 (1%)
Query: 29 IPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKE 88
+P+ ++ ++ ++ S+ K + ++ KD S + K + +
Sbjct: 17 LPTLTSPTAYADDPQKDSTAKTTSHDSKKSNDDETSKD---TSSKDTDKADNNNTSNQDN 73
Query: 89 KERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSH 148
++K S S+S+ + K + D+ + ++S
Sbjct: 74 NDKKFSTIDSSTSDSNNIIDFIYKNLPQTNINQLLTKNKYDDNYSLTTLIQNLFNLNSDI 133
Query: 149 NSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDK 208
+ E S+ ++ + K+ T+ +++K + + K +K +
Sbjct: 134 SDYEQPRNSEKSTNDSNKNSDSSIKNDTDTQSSKQDKADNQKAPSSNNTKPSTSNKQPNS 193
Query: 209 TNPKEKDAKSKEKESHKSSA 228
P + + + + S ++
Sbjct: 194 PKPTQPNQSNSQPASDDTAN 213
|
Length = 619 |
| >gnl|CDD|113514 pfam04747, DUF612, Protein of unknown function, DUF612 | Back alignment and domain information |
|---|
Score = 42.0 bits (97), Expect = 8e-04
Identities = 43/179 (24%), Positives = 82/179 (45%), Gaps = 1/179 (0%)
Query: 16 PSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVS 75
P+ ++ K++ A + S KK +K +D E E++ K+ +
Sbjct: 44 PNSINDQRKEAFASLELTEQPQQVEKVKKSEKKKAQKQIAKDHEAEQKVNAKKAAEKEAR 103
Query: 76 SKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKD-KKEKSHKHKDKDRERDKDEKKEQ 134
E E K +++E+E K+ K ++ +KE++K++ D KK ++ K K+K + +K EK E+
Sbjct: 104 RAEAEAKKRAAQEEEHKQWKAEQERIQKEQEKKEADLKKLQAEKKKEKAVKAEKAEKAEK 163
Query: 135 KESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDK 193
+ S+ V K+ A+ P P PT T P + ++ K++ K
Sbjct: 164 TKKASTPAPVEEEIVVKKVANDRSAAPAPEPKTPTNTPAEPAEQVQEITGKKNKKNKKK 222
|
This family includes several uncharacterized proteins from Caenorhabditis elegans. Length = 517 |
| >gnl|CDD|217393 pfam03154, Atrophin-1, Atrophin-1 family | Back alignment and domain information |
|---|
Score = 42.4 bits (99), Expect = 8e-04
Identities = 50/193 (25%), Positives = 88/193 (45%), Gaps = 26/193 (13%)
Query: 6 KSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKK-DKKDKDRDKEKEKEK 64
K ++S SP N+D+ SS S S +S++SN + + S+KK +KK K+ E
Sbjct: 22 KKQTASPDGRASP-TNEDQRSSGRNSPSAASTSSNDSKAESTKKPNKKIKE---EATSPL 77
Query: 65 KDKEKDKSAVSSKEKEKDKVSSKEKERKE----SKPKESSSEKEKKKEKKDKKEKSHKHK 120
K ++ + +S +E ++V++K+ + +E + P E E E + E D + + +
Sbjct: 78 KSTKRQREKPASDTEEPERVTAKKSKTQELSRPNSPSEGEGEGEGEGESSDSRSVNEEGS 137
Query: 121 DKDRERDKDEKK--------EQKESKSSSKIVSSSHNSKEPAS-----GSQLISHPPPPA 167
++ D+D + + ES S S + P S G+ L PPP
Sbjct: 138 SDPKDIDQDNRSSSPSIPSPQDNESDSDSSAQQQLLQPQGPPSIQVPPGAALAPSAPPPT 197
Query: 168 PT----PTQKSPV 176
P+ P Q SP+
Sbjct: 198 PSAQAVPPQGSPI 210
|
Atrophin-1 is the protein product of the dentatorubral-pallidoluysian atrophy (DRPLA) gene. DRPLA OMIM:125370 is a progressive neurodegenerative disorder. It is caused by the expansion of a CAG repeat in the DRPLA gene on chromosome 12p. This results in an extended polyglutamine region in atrophin-1, that is thought to confer toxicity to the protein, possibly through altering its interactions with other proteins. The expansion of a CAG repeat is also the underlying defect in six other neurodegenerative disorders, including Huntington's disease. One interaction of expanded polyglutamine repeats that is thought to be pathogenic is that with the short glutamine repeat in the transcriptional coactivator CREB binding protein, CBP. This interaction draws CBP away from its usual nuclear location to the expanded polyglutamine repeat protein aggregates that are characteristic of the polyglutamine neurodegenerative disorders. This interferes with CBP-mediated transcription and causes cytotoxicity. Length = 979 |
| >gnl|CDD|215521 PLN02967, PLN02967, kinase | Back alignment and domain information |
|---|
Score = 42.0 bits (98), Expect = 8e-04
Identities = 29/110 (26%), Positives = 51/110 (46%), Gaps = 3/110 (2%)
Query: 45 SSSKKDKKDKDRDKEKEKEKKDKEKDKSA-VSSKEKEKDKVSSKEKERKESKPKESSSE- 102
S K + K K+ E + ++ S V +++ DK S K R K +SS+
Sbjct: 69 SKKKPTRSVKRATKKTVVEISEPLEEGSELVVNEDAALDKESKKTPRRTRRKAAAASSDV 128
Query: 103 KEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKE 152
+E+K EKK +K + K K + D+ + E + + S + S + S+E
Sbjct: 129 EEEKTEKKVRKRRKVK-KMDEDVEDQGSESEVSDVEESEFVTSLENESEE 177
|
Length = 581 |
| >gnl|CDD|220102 pfam09073, BUD22, BUD22 | Back alignment and domain information |
|---|
Score = 41.7 bits (98), Expect = 9e-04
Identities = 28/141 (19%), Positives = 67/141 (47%), Gaps = 18/141 (12%)
Query: 56 RDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEK 115
+ + +K K K+ KS +K++ K SS + + +ES+ ++ S +E ++ D +E+
Sbjct: 142 IETKAKKGKAKKKTKKS-----KKKEAKESSDKDDEEESESEDESKSEESAEDDSDDEEE 196
Query: 116 SHKHKDKDRERDK-------DEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAP 168
+ + D +E+ E+ S + ++ S S + + + S +
Sbjct: 197 EDSDSEDYSQYDGMLVDSSDEEEGEEAPSINYNEDTSESESDESDSEIS------ESRSV 250
Query: 169 TPTQKSPVKTKEKEKEKESST 189
+ +++S +K+ +++K SST
Sbjct: 251 SDSEESSPPSKKPKEKKTSST 271
|
BUD22 has been shown in yeast to be a nuclear protein involved in bud-site selection. It plays a role in positioning the proximal bud pole signal. More recently it has been shown to be involved in ribosome biogenesis. Length = 424 |
| >gnl|CDD|240271 PTZ00108, PTZ00108, DNA topoisomerase 2-like protein; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 25/149 (16%), Positives = 47/149 (31%), Gaps = 12/149 (8%)
Query: 5 VKSSSSSSSAHPSPHKNKDKDSSAIPSTST--SSSTSNPTNS-SSSKKDKKDKDRDKEKE 61
K SS S N K S S+ S P N+ + ++
Sbjct: 1233 TKPKKSSVKRLKSKKNNSSKSSEDNDEFSSDDLSKEGKPKNAPKRVSAVQYSPPPPSKRP 1292
Query: 62 KEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSH---- 117
+ + S+ + K+ +K S +K+ K ++ ++ K+K K + + S
Sbjct: 1293 DGESNGGSKPSSPTKKKVKKRLEGSLAALKKKKKSEKKTARKKKSKTRVKQASASQSSRL 1352
Query: 118 -----KHKDKDRERDKDEKKEQKESKSSS 141
K K D D+ +
Sbjct: 1353 LRRPRKKKSDSSSEDDDDSEVDDSEDEDD 1381
|
Length = 1388 |
| >gnl|CDD|173412 PTZ00121, PTZ00121, MAEBL; Provisional | Back alignment and domain information |
|---|
Score = 41.7 bits (97), Expect = 0.001
Identities = 47/215 (21%), Positives = 93/215 (43%), Gaps = 2/215 (0%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKK 107
K ++K K + +K +E K E+ K A +K+ E+DK + K + K +E+ E+ K
Sbjct: 1541 KAEEKKKADELKKAEELKKAEEKKKAEEAKKAEEDKNMALRKAEEAKKAEEARIEEVMKL 1600
Query: 108 EKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPA 167
+++KK K+ + K + + K E+ ++ E + ++E +L
Sbjct: 1601 YEEEKKMKAEEAKKAEEAKIKAEELKKAEEEKKKVEQLKKKEAEEKKKAEELKKAEEENK 1660
Query: 168 PTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSS 227
+++ K E++K+K + + K + K + K ++ K KE E K +
Sbjct: 1661 IKAAEEA--KKAEEDKKKAEEAKKAEEDEKKAAEALKKEAEEAKKAEELKKKEAEEKKKA 1718
Query: 228 AGPKCYPEVGGIYILLRSKKNKTVQERLAEQFKDE 262
K E I K+ + +++ E KDE
Sbjct: 1719 EELKKAEEENKIKAEEAKKEAEEDKKKAEEAKKDE 1753
|
Length = 2084 |
| >gnl|CDD|233503 TIGR01642, U2AF_lg, U2 snRNP auxilliary factor, large subunit, splicing factor | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.001
Identities = 19/132 (14%), Positives = 48/132 (36%), Gaps = 12/132 (9%)
Query: 81 KDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSS 140
+D+ +E+E+ + ++ SSE+ +++ + + + + ++R +D + + S
Sbjct: 1 RDEEPDREREKSRGRDRDRSSERPRRRSRDRSRFRDRHRRSRERSYREDSRPRDRRRYDS 60
Query: 141 SKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHK 200
S S S + V++ E+ + + + + K
Sbjct: 61 RSP-RSLRYSSVRRSRD----------RPRRRSRSVRSIEQHRRRLRDRS-PSNQWRKDD 108
Query: 201 KKDKHGDKTNPK 212
KK D P
Sbjct: 109 KKRSLWDIKPPG 120
|
These splicing factors consist of an N-terminal arginine-rich low complexity domain followed by three tandem RNA recognition motifs (pfam00076). The well-characterized members of this family are auxilliary components of the U2 small nuclear ribonuclearprotein splicing factor (U2AF). These proteins are closely related to the CC1-like subfamily of splicing factors (TIGR01622). Members of this subfamily are found in plants, metazoa and fungi. Length = 509 |
| >gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional | Back alignment and domain information |
|---|
Score = 41.6 bits (98), Expect = 0.001
Identities = 31/121 (25%), Positives = 55/121 (45%), Gaps = 8/121 (6%)
Query: 6 KSSSSSSSAHPSPHKNKDKDSSAIPST--STSSSTSNPTNSSSSKKDKK------DKDRD 57
S ++ + P + + ST S N ++S+KKDKK K +
Sbjct: 11 FFSGTTQKSKLQPISYIYSNVLVLSKEILSTFSEEENKVATTSTKKDKKEDKNNESKKKS 70
Query: 58 KEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSH 117
++K+K+KK+K++ KS +K K SK+ ++K KPK + + + EKS+
Sbjct: 71 EKKKKKKKEKKEPKSEGETKLGFKTPKKSKKTKKKPPKPKPNEDVDNAFNKIAELAEKSN 130
Query: 118 K 118
Sbjct: 131 V 131
|
Length = 413 |
| >gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional | Back alignment and domain information |
|---|
Score = 40.9 bits (96), Expect = 0.001
Identities = 27/122 (22%), Positives = 45/122 (36%), Gaps = 3/122 (2%)
Query: 26 SSAIPSTSTSSSTSNP-TNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKV 84
S S S +N K+ ++E + +KDK + E +K
Sbjct: 12 FSGTTQKSKLQPISYIYSNVLVLSKEILSTFSEEENKVATTSTKKDKKEDKNNESKKKSE 71
Query: 85 SSKE-KERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRE-RDKDEKKEQKESKSSSK 142
K+ K+ K+ E ++ K KK KK K K K E D K + ++ S+
Sbjct: 72 KKKKKKKEKKEPKSEGETKLGFKTPKKSKKTKKKPPKPKPNEDVDNAFNKIAELAEKSNV 131
Query: 143 IV 144
+
Sbjct: 132 YI 133
|
Length = 413 |
| >gnl|CDD|114011 pfam05262, Borrelia_P83, Borrelia P83/100 protein | Back alignment and domain information |
|---|
Score = 41.5 bits (97), Expect = 0.001
Identities = 31/104 (29%), Positives = 58/104 (55%), Gaps = 9/104 (8%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKES-KPKESSSEKEKK 106
+ + ++ DK++ K ++K A + +K++D+V K++E K KP ++SS KE K
Sbjct: 214 RAQQLKEELDKKQIDADKAQQKADFAQDNADKQRDEVRQKQQEAKNLPKPADTSSPKEDK 273
Query: 107 K---EKKDKKEKSH---KHKDKDRERDKDEKKE--QKESKSSSK 142
+ +K + EK+ K D++ + KD K ++ESK+S K
Sbjct: 274 QVAENQKREIEKAQIEIKKNDEEALKAKDHKAFDLKQESKASEK 317
|
This family consists of several Borrelia P83/P100 antigen proteins. Length = 489 |
| >gnl|CDD|114011 pfam05262, Borrelia_P83, Borrelia P83/100 protein | Back alignment and domain information |
|---|
Score = 41.1 bits (96), Expect = 0.001
Identities = 24/111 (21%), Positives = 49/111 (44%), Gaps = 3/111 (2%)
Query: 45 SSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKE 104
+SS K+ K ++++E EK E K+ + + + K ++E K S+ + E E
Sbjct: 266 TSSPKEDKQVAENQKREIEKAQIEIKKNDEEALKAKDHKAFDLKQESKASEKEAEDKELE 325
Query: 105 KKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSS---KIVSSSHNSKE 152
+K+++ E K K + + ++ +S + K+V N E
Sbjct: 326 AQKKREPVAEDLQKTKPQVEAQPTSLNEDAIDSSNPVYGLKVVDPITNLSE 376
|
This family consists of several Borrelia P83/P100 antigen proteins. Length = 489 |
| >gnl|CDD|215641 PLN03237, PLN03237, DNA topoisomerase 2; Provisional | Back alignment and domain information |
|---|
Score = 41.8 bits (98), Expect = 0.001
Identities = 32/218 (14%), Positives = 74/218 (33%), Gaps = 6/218 (2%)
Query: 16 PSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSS---KKDKKDKDRDKEKEKEKKDKEKDKS 72
P+P K K S + + T S++ T + + K + + ++K++E +
Sbjct: 1205 PAPKKTTKKASESETTEETYGSSAMETENVAEVVKPKGRAGAKKKAPAAAKEKEEEDEIL 1264
Query: 73 AVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKK 132
+ + + S+ + K + ++ + KK D D + D +
Sbjct: 1265 DLKDRLAAYNLDSAPAQSAKMEETVKAVPARRAAARKK-PLASVSVISDSDDDDDDFAVE 1323
Query: 133 EQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHD 192
+ K + + A+ + PA + + E K E+
Sbjct: 1324 VSLAERLKKKGGRKPAAANKKAAKPPAAAKKRGPATVQSGQ--KLLTEMLKPAEAIGISP 1381
Query: 193 KHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSSAGP 230
+ K + + + + A +KE ES ++ +G
Sbjct: 1382 EKKVRKMRASPFNKKSGSVLGRAATNKETESSENVSGS 1419
|
Length = 1465 |
| >gnl|CDD|220365 pfam09726, Macoilin, Transmembrane protein | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.001
Identities = 43/274 (15%), Positives = 86/274 (31%), Gaps = 13/274 (4%)
Query: 7 SSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKD 66
SS +S + S S++S T S K +
Sbjct: 220 SSKGLTSTKELVPVQNSGGNH-SLSKSSNSQTPELEYSEKGKDHHHSHNHQHHSIGINNH 278
Query: 67 KEKDKSAVSSKEKEKDKVSSKEKERKES--KPKESSSEKEKKKEKKDKKEKSHKHKDKDR 124
K + + + S+K + S KE++S + S K +R
Sbjct: 279 HSKHADSKLQTIEVIENHSNKSRPSSSSTNGSKETTSNSSSAAAGSIGSKSSKSAKHSNR 338
Query: 125 ERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHP---PPPAPTPTQKSPVKTKEK 181
+ K + S S S N + S+ S A + V+
Sbjct: 339 NKSNSSPKSHSSANGSVPSSSVSDNESKQKRASKSSSGARDSKKDASGMSANGTVENCIP 398
Query: 182 EKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDAKSKEKESHKSSAGPKCYPEVGGI-- 239
E + +T + + K + ++ +++ + + S +S ++G +
Sbjct: 399 ENK---ISTPSAIERLEQDIKKLQAELQQARQNESELRNQISLLTSLERSLKSDLGQLKK 455
Query: 240 -YILLRSKKNKTVQERLAE-QFKDELFDRLKNEQ 271
+L++K N V + + Q + RLK+E
Sbjct: 456 ENDMLQTKLNSMVSAKQKDKQSMQSMEKRLKSEA 489
|
This entry is a highly conserved protein present in eukaryotes. Length = 680 |
| >gnl|CDD|233496 TIGR01622, SF-CC1, splicing factor, CC1-like family | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.001
Identities = 14/84 (16%), Positives = 38/84 (45%), Gaps = 3/84 (3%)
Query: 56 RDKEKEKEK-KDKEKDKSAVSSKEKEKDK-VSSKEKER-KESKPKESSSEKEKKKEKKDK 112
RD+E+ + + + DK S+ + + + S + ++R + S + + + +
Sbjct: 3 RDRERGRLRNDTRRSDKGRERSRRRSRSRDRSRRRRDRDYYRGRRGRSRSRSPNRYYRPR 62
Query: 113 KEKSHKHKDKDRERDKDEKKEQKE 136
++S++ D+ R+ E + E
Sbjct: 63 GDRSYRRDDRRSGRNTKEPLTEAE 86
|
This model represents a subfamily of RNA splicing factors including the Pad-1 protein (N. crassa), CAPER (M. musculus) and CC1.3 (H.sapiens). These proteins are characterized by an N-terminal arginine-rich, low complexity domain followed by three (or in the case of 4 H. sapiens paralogs, two) RNA recognition domains (rrm: pfam00706). These splicing factors are closely related to the U2AF splicing factor family (TIGR01642). A homologous gene from Plasmodium falciparum was identified in the course of the analysis of that genome at TIGR and was included in the seed. Length = 457 |
| >gnl|CDD|234229 TIGR03490, Mycoplas_LppA, mycoides cluster lipoprotein, LppA/P72 family | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.001
Identities = 31/106 (29%), Positives = 50/106 (47%), Gaps = 6/106 (5%)
Query: 29 IPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKE 88
I S S S S T SS+SK+ +K + + K K+ D + + E + S
Sbjct: 13 ISSISFLSVVSCSTTSSNSKQPEKKPEIKPNENTPKIPKKPD----NKEPSENNNNKSNN 68
Query: 89 KERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQ 134
+ + E P SS+ EKK + KE+ K KD+ ++ DK + +Q
Sbjct: 69 ENKDEENP--SSTNPEKKPDPSKNKEEIEKPKDEPKKPDKKPQADQ 112
|
Members of this protein family occur in Mycoplasma mycoides, Mycoplasma hyopneumoniae, and related Mycoplasmas in small paralogous families that may also include truncated forms and/or pseudogenes. Members are predicted lipoproteins with a conserved signal peptidase II processing and lipid attachment site. Note that the name for certain characterized members, p72, reflects an anomalous apparent molecular weight, given a theoretical MW of about 61 kDa. Length = 541 |
| >gnl|CDD|178945 PRK00247, PRK00247, putative inner membrane protein translocase component YidC; Validated | Back alignment and domain information |
|---|
Score = 41.4 bits (97), Expect = 0.001
Identities = 16/90 (17%), Positives = 36/90 (40%), Gaps = 5/90 (5%)
Query: 104 EKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSK-----IVSSSHNSKEPASGSQ 158
EK + K KKE + K + +RE +++ ++E+ + + ++ + + + +
Sbjct: 339 EKNEAKARKKEIAQKRRAAEREINREARQERAAAMARARARRAAVKAKKKGLIDASPNED 398
Query: 159 LISHPPPPAPTPTQKSPVKTKEKEKEKESS 188
S +P Q T E +E
Sbjct: 399 TPSENEESKGSPPQVEATTTAEPNREPSQE 428
|
Length = 429 |
| >gnl|CDD|216461 pfam01370, Epimerase, NAD dependent epimerase/dehydratase family | Back alignment and domain information |
|---|
Score = 40.3 bits (95), Expect = 0.001
Identities = 31/158 (19%), Positives = 46/158 (29%), Gaps = 49/158 (31%)
Query: 300 FIQHHIHVIIHAAASLRFDELIQDAFTL---NIQATRELLDLATRCSQLKAILHVSTLYT 356
+ +IH AA +D N+ T LL+ A R K + S+
Sbjct: 59 LAEVQPDAVIHLAAQSGVGASFEDPADFIRANVLGTLRLLEAARRAGV-KRFVFASS--- 114
Query: 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416
E Y + + I G + Y+ K E +V
Sbjct: 115 --------SEVYGDV---------------ADPPITEDTPLG--PLSPYAAAKLAAERLV 149
Query: 417 EKY--LYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPG 452
E Y Y L ++R N+YGPG
Sbjct: 150 EAYARAYGLRAVILRLF---------------NVYGPG 172
|
This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions. Length = 233 |
| >gnl|CDD|235250 PRK04195, PRK04195, replication factor C large subunit; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 20/81 (24%), Positives = 46/81 (56%)
Query: 78 EKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKES 137
E+E + ++ +K K+ K +EK++++EKK+KK+K+ K K+ E +++++K+++E
Sbjct: 396 EEEIEFLTGSKKATKKIKKIVEKAEKKREEEKKEKKKKAFAGKKKEEEEEEEKEKKEEEK 455
Query: 138 KSSSKIVSSSHNSKEPASGSQ 158
+ + +E Q
Sbjct: 456 EEEEEEAEEEKEEEEEKKKKQ 476
|
Length = 482 |
| >gnl|CDD|220271 pfam09507, CDC27, DNA polymerase subunit Cdc27 | Back alignment and domain information |
|---|
Score = 40.6 bits (95), Expect = 0.002
Identities = 36/213 (16%), Positives = 62/213 (29%), Gaps = 25/213 (11%)
Query: 24 KDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDK 83
KDS+ + N N S + + + K+ V+ K
Sbjct: 96 KDSNVLYDVDYDILKENLHNCSKNSLEYGKQAGPITNPNVKRRTGVGLPPVAPAASPALK 155
Query: 84 VSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKI 143
++ K PK S + K K K ++ S K+ E+ E K+S K
Sbjct: 156 PTANGKRPSSKPPKSIMSPEVKVKSAKKTQDTS-----------KETTTEKTEGKTSVKA 204
Query: 144 VSSSHNSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKESSTTHDKHSKHKH---- 199
S N + ++ +++ T ++E E+ES
Sbjct: 205 ASLKRNPPKKSNIMSSFFKKKTKEKKEKKEASESTVKEESEEESGKRDVILEDESAEPTG 264
Query: 200 ----------KKKDKHGDKTNPKEKDAKSKEKE 222
K + D E+ K K K
Sbjct: 265 LDEDEDEDEPKPSGERSDSEEETEEKEKEKRKR 297
|
This protein forms the C subunit of DNA polymerase delta. It carries the essential residues for binding to the Pol1 subunit of polymerase alpha, from residues 293-332, which are characterized by the motif D--G--VT, referred to as the DPIM motif. The first 160 residues of the protein form the minimal domain for binding to the B subunit, Cdc1, of polymerase delta, the final 10 C-terminal residues, 362-372, being the DNA sliding clamp, PCNA, binding motif. Length = 427 |
| >gnl|CDD|115057 pfam06375, BLVR, Bovine leukaemia virus receptor (BLVR) | Back alignment and domain information |
|---|
Score = 40.8 bits (95), Expect = 0.002
Identities = 33/126 (26%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 47 SKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKES------KPKESS 100
KK+KK+K+++++K+K KK+ E KS + + + +S + + S S
Sbjct: 203 KKKEKKEKEKERDKDK-KKEVEGFKSLLLALDDSPASAASVAEADEASLANTVSGTAPDS 261
Query: 101 SEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLI 160
E K + ++ +KS KHK K + ++K+EKK++K+ + S +++P +
Sbjct: 262 EPDEPKDAEAEETKKSPKHKKKKQRKEKEEKKKKKK-HHHHRCHHSDGGAEQPVQNGAVE 320
Query: 161 SHPPPP 166
P PP
Sbjct: 321 EEPLPP 326
|
This family consists of several bovine specific leukaemia virus receptors which are thought to function as transmembrane proteins, although their exact function is unknown. Length = 561 |
| >gnl|CDD|235640 PRK05901, PRK05901, RNA polymerase sigma factor; Provisional | Back alignment and domain information |
|---|
Score = 40.7 bits (96), Expect = 0.002
Identities = 19/124 (15%), Positives = 41/124 (33%), Gaps = 1/124 (0%)
Query: 20 KNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEK 79
K A + S S K++ ++ + K+K ++ D+ +
Sbjct: 3 TASTKAELAAEEEAKKKLKKLAAKSKSKGFITKEEIKEALESKKKTPEQIDQVLIFLSGM 62
Query: 80 EKDKVSSKE-KERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESK 138
KD + E K+ + + K KK K++ K +++ D+ + K
Sbjct: 63 VKDTDDATESDIPKKKTKTAAKAAAAKAPAKKKLKDELDSSKKAEKKNALDKDDDLNYVK 122
Query: 139 SSSK 142
Sbjct: 123 DIDV 126
|
Length = 509 |
| >gnl|CDD|240370 PTZ00342, PTZ00342, acyl-CoA synthetase; Provisional | Back alignment and domain information |
|---|
Score = 41.2 bits (97), Expect = 0.002
Identities = 27/103 (26%), Positives = 42/103 (40%), Gaps = 9/103 (8%)
Query: 58 KEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSH 117
++EK + ++KE++K S E E P E +KEK ++ KD KEK+
Sbjct: 219 NKEEKNNGSNVNNNGNKNNKEEQKGNDLSNELEDISLGPLEY--DKEKLEKIKDLKEKAK 276
Query: 118 KHKDKDRERDKDEKKEQKESKSS-------SKIVSSSHNSKEP 153
K D K + K + IV +S S +P
Sbjct: 277 KLGISIILFDDMTKNKTTNYKIQNEDPDFITSIVYTSGTSGKP 319
|
Length = 746 |
| >gnl|CDD|183610 PRK12585, PRK12585, putative monovalent cation/H+ antiporter subunit G; Reviewed | Back alignment and domain information |
|---|
Score = 39.3 bits (91), Expect = 0.002
Identities = 27/97 (27%), Positives = 52/97 (53%), Gaps = 11/97 (11%)
Query: 56 RDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEK 115
RD+ + +K D +K KS + +E+ EK R+E + E E E+++EK D++E
Sbjct: 104 RDQLRSVKKDDIKKKKSLIIRQEQ-------IEKARQEREELEERMEWERREEKIDERE- 155
Query: 116 SHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKE 152
++++RER++ +EQ + S +I+ + E
Sbjct: 156 --DQEEQEREREEQTIEEQSDD-SEHEIIEQDESETE 189
|
Length = 197 |
| >gnl|CDD|172341 PRK13808, PRK13808, adenylate kinase; Provisional | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.002
Identities = 25/139 (17%), Positives = 53/139 (38%), Gaps = 6/139 (4%)
Query: 6 KSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKK 65
+++ ++ P+ K S+ S + S ++ K + KK
Sbjct: 196 AANAKKAAKTPAAKSGAKKASAKAKSAAKKVSKK----KAAKTAVSAKKAAKTAAKAAKK 251
Query: 66 DKEKDKSAVSSKEKEKDKVSSKEKE--RKESKPKESSSEKEKKKEKKDKKEKSHKHKDKD 123
K+ K A+ K K + K + K +K +++ + K +KK K+ + K K
Sbjct: 252 AKKTAKKALKKAAKAVKKAAKKAAKAAAKAAKGAAKATKGKAKAKKKAGKKAAAGSKAKA 311
Query: 124 RERDKDEKKEQKESKSSSK 142
+ + K++K +K
Sbjct: 312 TAKAPKRGAKGKKAKKVTK 330
|
Length = 333 |
| >gnl|CDD|219953 pfam08648, DUF1777, Protein of unknown function (DUF1777) | Back alignment and domain information |
|---|
Score = 38.7 bits (90), Expect = 0.002
Identities = 24/109 (22%), Positives = 48/109 (44%), Gaps = 5/109 (4%)
Query: 35 SSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKES 94
S S S + + +DR + + + + +E+D+ S S+ R S
Sbjct: 2 GRSRSRSPRRSRRRGRSRSRDRRERRRERSRSRERDRRRRSRSRSPHRSRRSRSPRRHRS 61
Query: 95 KPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKI 143
S +++++K +++K + + K RER K K+E E KS ++
Sbjct: 62 ----RSRSPSRRRDRKRERDKDAR-EPKKRERQKLIKEEDLEGKSDEEV 105
|
This is a family of eukaryotic proteins of unknown function. Some of the proteins in this family are putative nucleic acid binding proteins. Length = 158 |
| >gnl|CDD|240388 PTZ00372, PTZ00372, endonuclease 4-like protein; Provisional | Back alignment and domain information |
|---|
Score = 39.7 bits (93), Expect = 0.003
Identities = 29/119 (24%), Positives = 44/119 (36%), Gaps = 6/119 (5%)
Query: 68 EKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERD 127
+K K S V SKE S+ + + KK+KK+ K K K + +++
Sbjct: 17 QKSKLQPISYIYSNVLVLSKEILSTFSEEENKVATTSTKKDKKEDKNNESKKKSEKKKKK 76
Query: 128 KDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKSPVKTKEKEKEKE 186
K EKKE K + + SK+ PP P P + + EK
Sbjct: 77 KKEKKEPKSEGETKLGFKTPKKSKKTK------KKPPKPKPNEDVDNAFNKIAELAEKS 129
|
Length = 413 |
| >gnl|CDD|172341 PRK13808, PRK13808, adenylate kinase; Provisional | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.003
Identities = 32/144 (22%), Positives = 59/144 (40%), Gaps = 6/144 (4%)
Query: 44 SSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEK 103
++++KK K +K + VS K+ K VS+K+ + +K + + +
Sbjct: 196 AANAKKAAKTPAAKSGAKKASAKAKSAAKKVSKKKAAKTAVSAKKAAKTAAKAAKKAKKT 255
Query: 104 EKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHP 163
KK KK K K + K K K +K +K + K+ A+GS+ +
Sbjct: 256 AKKALKKAAKAVKKAAKKAAKAAAKAAKGAAKATKGKAK--AKKKAGKKAAAGSKAKA-- 311
Query: 164 PPPAPTPTQKSPVKTKEKEKEKES 187
A P + + K +K +K +
Sbjct: 312 --TAKAPKRGAKGKKAKKVTKKRA 333
|
Length = 333 |
| >gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase | Back alignment and domain information |
|---|
Score = 40.3 bits (94), Expect = 0.003
Identities = 25/106 (23%), Positives = 51/106 (48%), Gaps = 6/106 (5%)
Query: 44 SSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEK 103
S + + +K ++E E++KK +EK +KEKE K+ + +KE K + +S+
Sbjct: 2 SRTESEAEKKILTEEELERKKKKEEK------AKEKELKKLKAAQKEAKAKLQAQQASDG 55
Query: 104 EKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHN 149
+K +KK + +D++ E D + K S ++ ++
Sbjct: 56 TNVPKKSEKKSRKRDVEDENPEDFIDPDTPFGQKKRLSSQMAKQYS 101
|
Length = 1066 |
| >gnl|CDD|177089 CHL00189, infB, translation initiation factor 2; Provisional | Back alignment and domain information |
|---|
Score = 40.2 bits (94), Expect = 0.003
Identities = 28/133 (21%), Positives = 44/133 (33%), Gaps = 8/133 (6%)
Query: 20 KNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKD--RDKEKEKEKKDKE---KDKSAV 74
++ KDS + + K KD + K K+K+K K+ D
Sbjct: 36 ESDIKDSLLNLDINKKLHEKLDKKNKKFNKTDDLKDSKKTKLKQKKKIKKKLHIDDDYDN 95
Query: 75 SSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQ 134
K K + + + +EK KKK +K K K KDE +
Sbjct: 96 FFDSKNNSKQFAGPLAISLMRKPKPKTEKLKKKITVNKST---NKKKKKVLSSKDELIKY 152
Query: 135 KESKSSSKIVSSS 147
+K S + S
Sbjct: 153 DNNKPKSISIHSP 165
|
Length = 742 |
| >gnl|CDD|219746 pfam08208, RNA_polI_A34, DNA-directed RNA polymerase I subunit RPA34 | Back alignment and domain information |
|---|
Score = 38.5 bits (90), Expect = 0.004
Identities = 22/86 (25%), Positives = 43/86 (50%), Gaps = 10/86 (11%)
Query: 25 DSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKV 84
+ S S S + ++ K +K+ + ++E++KEKK K++ K K+ +K+K+
Sbjct: 118 YGAPDGPPSELGSESETSEKETTAKVEKEAEVEEEEKKEKKKKKEVKKEKKEKKDKKEKM 177
Query: 85 SSKEKERKESKPKESSSEKEKKKEKK 110
+ +K K+KKK+KK
Sbjct: 178 VEPKGSKK----------KKKKKKKK 193
|
5. This is a family of proteins conserved from yeasts to human. Subunit A34.5 of RNA polymerase I is a non-essential subunit which is thought to help Pol I overcome topological constraints imposed on ribosomal DNA during the process of transcription. Length = 193 |
| >gnl|CDD|215214 PLN02381, PLN02381, valyl-tRNA synthetase | Back alignment and domain information |
|---|
Score = 39.9 bits (93), Expect = 0.004
Identities = 20/89 (22%), Positives = 36/89 (40%), Gaps = 2/89 (2%)
Query: 85 SSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIV 144
+ E E+K +E E++KKKE+K K+++ K K +E + +Q ++
Sbjct: 4 TESEAEKKILTEEEL--ERKKKKEEKAKEKELKKLKAAQKEAKAKLQAQQASDGTNVPKK 61
Query: 145 SSSHNSKEPASGSQLISHPPPPAPTPTQK 173
S + K P P +K
Sbjct: 62 SEKKSRKRDVEDENPEDFIDPDTPFGQKK 90
|
Length = 1066 |
| >gnl|CDD|218538 pfam05285, SDA1, SDA1 | Back alignment and domain information |
|---|
Score = 39.3 bits (92), Expect = 0.004
Identities = 43/183 (23%), Positives = 64/183 (34%), Gaps = 39/183 (21%)
Query: 50 DKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKE----- 104
DK+ + D E E+EK + K S +E ++ +E + KE +SE
Sbjct: 124 DKEIESSDSEDEEEKDEAAKKAKEDSDEELSEEDEEEAAEEEEAEAEKEKASELATTRIL 183
Query: 105 ------KKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQ 158
K +E + +K K + RDKD +S E
Sbjct: 184 TPADFAKIQELRLEKGVDKALGGKLKRRDKDA---------------PERHSDELVDADD 228
Query: 159 LISHPPPPAPTPTQKSPVKTKEK--EKEKESSTTHDKHSKHKHKKKDKHGDKTNPKEKDA 216
+ P +K TKE+ KE +K K KK + TN KEK A
Sbjct: 229 IE------GPAKKKKQ---TKEERIATAKEGREDREKFGSRKGKKDKEGKSTTN-KEK-A 277
Query: 217 KSK 219
+ K
Sbjct: 278 RKK 280
|
This family consists of several SDA1 protein homologues. SDA1 is a Saccharomyces cerevisiae protein which is involved in the control of the actin cytoskeleton. The protein is essential for cell viability and is localised in the nucleus. Length = 317 |
| >gnl|CDD|219655 pfam07946, DUF1682, Protein of unknown function (DUF1682) | Back alignment and domain information |
|---|
Score = 39.2 bits (92), Expect = 0.004
Identities = 24/71 (33%), Positives = 43/71 (60%), Gaps = 6/71 (8%)
Query: 45 SSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKE 104
S K DK R++E+EK K E+++ + ++KE+ K+KE +E+K + S E++
Sbjct: 254 SPEVLRKVDKTREEEEEKILKAAEEERQEEAQEKKEE-----KKKEEREAKLAKLSPEEQ 308
Query: 105 KKKE-KKDKKE 114
+K E K+ KK+
Sbjct: 309 RKLEEKERKKQ 319
|
The members of this family are all hypothetical eukaryotic proteins of unknown function. One member is described as being an adipocyte-specific protein, but no evidence of this was found. Length = 322 |
| >gnl|CDD|226096 COG3566, COG3566, Uncharacterized protein conserved in bacteria [Function unknown] | Back alignment and domain information |
|---|
Score = 39.5 bits (92), Expect = 0.004
Identities = 16/102 (15%), Positives = 41/102 (40%), Gaps = 4/102 (3%)
Query: 48 KKDKKDKDRDKEK-EKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKK 106
+ D E+ + + +S + +KV + EK+ ++ K S + K
Sbjct: 184 PITTRRIGVDGISLSLEETKASEVEHLSASLKTATEKVDALEKDLHAAQAKLDSGQALTK 243
Query: 107 KE---KKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVS 145
+E KK + K+ + D+D + +++++++
Sbjct: 244 EELDAKKAELSKALAALEAANAADEDPQDRDAAVEAAARLMG 285
|
Length = 379 |
| >gnl|CDD|222636 pfam14265, DUF4355, Domain of unknown function (DUF4355) | Back alignment and domain information |
|---|
Score = 37.2 bits (87), Expect = 0.004
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 1/78 (1%)
Query: 57 DKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKS 116
+ E+EK DKE DK+ K K + K K+ E ++ K S+ EK + + +K +KE
Sbjct: 1 EPEEEKTFTDKEVDKAIAKEKAKWEKKQEEKKSEAEKLA-KMSAEEKAEYELEKLEKELE 59
Query: 117 HKHKDKDRERDKDEKKEQ 134
+ R K E K+
Sbjct: 60 ELEAELARRELKAEAKKM 77
|
This family of proteins is found in bacteria and viruses. Proteins in this family are typically between 180 and 214 amino acids in length. Length = 125 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 596 | |||
| KOG1221|consensus | 467 | 100.0 | ||
| PLN02996 | 491 | fatty acyl-CoA reductase | 100.0 | |
| PLN02503 | 605 | fatty acyl-CoA reductase 2 | 100.0 | |
| PF07993 | 249 | NAD_binding_4: Male sterility protein; InterPro: I | 100.0 | |
| COG3320 | 382 | Putative dehydrogenase domain of multifunctional n | 100.0 | |
| COG1087 | 329 | GalE UDP-glucose 4-epimerase [Cell envelope biogen | 99.97 | |
| COG1088 | 340 | RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope | 99.96 | |
| PF01073 | 280 | 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/iso | 99.96 | |
| PRK15181 | 348 | Vi polysaccharide biosynthesis protein TviC; Provi | 99.95 | |
| TIGR01746 | 367 | Thioester-redct thioester reductase domain. It has | 99.94 | |
| KOG0747|consensus | 331 | 99.93 | ||
| PLN02427 | 386 | UDP-apiose/xylose synthase | 99.93 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 99.92 | |
| TIGR03443 | 1389 | alpha_am_amid L-aminoadipate-semialdehyde dehydrog | 99.92 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 99.92 | |
| PLN02166 | 436 | dTDP-glucose 4,6-dehydratase | 99.92 | |
| KOG1430|consensus | 361 | 99.91 | ||
| KOG1502|consensus | 327 | 99.91 | ||
| PLN02206 | 442 | UDP-glucuronate decarboxylase | 99.91 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 99.91 | |
| PRK10217 | 355 | dTDP-glucose 4,6-dehydratase; Provisional | 99.9 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 99.9 | |
| PRK10084 | 352 | dTDP-glucose 4,6 dehydratase; Provisional | 99.9 | |
| PLN02572 | 442 | UDP-sulfoquinovose synthase | 99.9 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.89 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 99.89 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.89 | |
| COG0451 | 314 | WcaG Nucleoside-diphosphate-sugar epimerases [Cell | 99.89 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 99.89 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 99.89 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 99.89 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 99.89 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 99.89 | |
| PRK11150 | 308 | rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Pro | 99.88 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 99.88 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 99.88 | |
| PLN02725 | 306 | GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductas | 99.88 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 99.87 | |
| PRK09987 | 299 | dTDP-4-dehydrorhamnose reductase; Provisional | 99.87 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 99.87 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 99.87 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 99.87 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 99.87 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 99.86 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 99.85 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 99.85 | |
| KOG1429|consensus | 350 | 99.84 | ||
| TIGR01214 | 287 | rmlD dTDP-4-dehydrorhamnose reductase. This enzyme | 99.84 | |
| TIGR01179 | 328 | galE UDP-glucose-4-epimerase. This enzyme intercon | 99.84 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 99.83 | |
| KOG1371|consensus | 343 | 99.83 | ||
| PLN02583 | 297 | cinnamoyl-CoA reductase | 99.82 | |
| PLN02778 | 298 | 3,5-epimerase/4-reductase | 99.82 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 99.81 | |
| PF04321 | 286 | RmlD_sub_bind: RmlD substrate binding domain; Inte | 99.81 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 99.8 | |
| COG1091 | 281 | RfbD dTDP-4-dehydrorhamnose reductase [Cell envelo | 99.79 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 99.79 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 99.78 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 99.78 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 99.77 | |
| PRK05865 | 854 | hypothetical protein; Provisional | 99.72 | |
| PLN02260 | 668 | probable rhamnose biosynthetic enzyme | 99.65 | |
| PRK12320 | 699 | hypothetical protein; Provisional | 99.57 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 99.54 | |
| KOG2865|consensus | 391 | 99.51 | ||
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 99.5 | |
| KOG1431|consensus | 315 | 99.47 | ||
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 99.46 | |
| COG1089 | 345 | Gmd GDP-D-mannose dehydratase [Cell envelope bioge | 99.41 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 99.4 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.4 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 99.37 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 99.34 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 99.32 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.31 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 99.31 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 99.3 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 99.3 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 99.29 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 99.28 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 99.27 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 99.26 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 99.25 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 99.24 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 99.24 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 99.21 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 99.19 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 99.18 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 99.18 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 99.17 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 99.17 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.16 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.15 | |
| KOG2774|consensus | 366 | 99.13 | ||
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 99.13 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 99.13 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 99.12 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 99.11 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 99.1 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 99.09 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 99.09 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 99.09 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 99.08 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 99.08 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 99.07 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 99.07 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.06 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 99.06 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 99.05 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 99.05 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 99.05 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 99.05 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 99.03 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 99.02 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 99.01 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 98.99 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.99 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 98.98 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 98.98 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 98.97 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 98.97 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 98.97 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 98.96 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 98.95 | |
| PRK05717 | 255 | oxidoreductase; Validated | 98.95 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 98.94 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 98.92 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 98.91 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 98.91 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 98.91 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 98.91 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.9 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 98.9 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 98.9 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 98.89 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.89 | |
| KOG1372|consensus | 376 | 98.89 | ||
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 98.86 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.86 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 98.86 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 98.85 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 98.85 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 98.84 | |
| PRK08643 | 256 | acetoin reductase; Validated | 98.84 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 98.84 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 98.84 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.84 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 98.83 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 98.83 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 98.82 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.82 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.81 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 98.81 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 98.79 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 98.79 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 98.78 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 98.78 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 98.77 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 98.77 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 98.77 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 98.77 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 98.77 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.76 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 98.76 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 98.76 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 98.75 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 98.75 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 98.75 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 98.74 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 98.73 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 98.73 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 98.72 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 98.7 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 98.69 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 98.69 | |
| KOG4288|consensus | 283 | 98.69 | ||
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 98.69 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 98.68 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 98.67 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 98.66 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 98.65 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 98.64 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 98.64 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.63 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.62 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 98.62 | |
| KOG3019|consensus | 315 | 98.62 | ||
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 98.62 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 98.62 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 98.61 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 98.61 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 98.61 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 98.6 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 98.6 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 98.59 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.58 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 98.58 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 98.57 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.57 | |
| smart00822 | 180 | PKS_KR This enzymatic domain is part of bacterial | 98.55 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 98.53 | |
| COG0702 | 275 | Predicted nucleoside-diphosphate-sugar epimerases | 98.53 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 98.53 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 98.51 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 98.51 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.51 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 98.5 | |
| PRK12428 | 241 | 3-alpha-hydroxysteroid dehydrogenase; Provisional | 98.49 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 98.49 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 98.48 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 98.46 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 98.45 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 98.44 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 98.44 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 98.43 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 98.43 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 98.42 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 98.41 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.4 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 98.4 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 98.39 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 98.38 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.38 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 98.37 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 98.35 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 98.34 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.33 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 98.32 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.31 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 98.3 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 98.29 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.28 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 98.27 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 98.27 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.26 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.2 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 98.2 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.18 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 98.18 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.18 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.18 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.17 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 98.16 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 98.12 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 98.1 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 98.08 | |
| PRK09009 | 235 | C factor cell-cell signaling protein; Provisional | 98.07 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 98.05 | |
| KOG4039|consensus | 238 | 98.0 | ||
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 97.99 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.98 | |
| KOG1205|consensus | 282 | 97.97 | ||
| KOG1610|consensus | 322 | 97.97 | ||
| PLN00015 | 308 | protochlorophyllide reductase | 97.93 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 97.92 | |
| PF08659 | 181 | KR: KR domain; InterPro: IPR013968 This domain is | 97.84 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 97.77 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.73 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 97.73 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 97.66 | |
| KOG1203|consensus | 411 | 97.55 | ||
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 97.53 | |
| KOG1201|consensus | 300 | 97.52 | ||
| KOG1204|consensus | 253 | 97.45 | ||
| TIGR02813 | 2582 | omega_3_PfaA polyketide-type polyunsaturated fatty | 97.38 | |
| KOG1208|consensus | 314 | 97.22 | ||
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.14 | |
| KOG1611|consensus | 249 | 97.1 | ||
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 97.09 | |
| KOG4364|consensus | 811 | 97.06 | ||
| KOG0725|consensus | 270 | 96.99 | ||
| KOG1210|consensus | 331 | 96.96 | ||
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.93 | |
| KOG4364|consensus | 811 | 96.64 | ||
| KOG1200|consensus | 256 | 96.62 | ||
| KOG1207|consensus | 245 | 96.6 | ||
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 96.02 | |
| KOG1209|consensus | 289 | 95.9 | ||
| PTZ00325 | 321 | malate dehydrogenase; Provisional | 95.71 | |
| KOG4169|consensus | 261 | 95.58 | ||
| PTZ00266 | 1021 | NIMA-related protein kinase; Provisional | 95.54 | |
| PLN00106 | 323 | malate dehydrogenase | 95.44 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 94.92 | |
| KOG1199|consensus | 260 | 91.77 | ||
| KOG1014|consensus | 312 | 91.36 | ||
| PF08732 | 410 | HIM1: HIM1; InterPro: IPR014843 HIM1 (high inducti | 89.14 | |
| PF10500 | 225 | SR-25: Nuclear RNA-splicing-associated protein; In | 87.83 | |
| cd01338 | 322 | MDH_choloroplast_like Chloroplast-like malate dehy | 85.16 | |
| KOG1478|consensus | 341 | 83.48 | ||
| PRK06720 | 169 | hypothetical protein; Provisional | 82.3 | |
| COG0623 | 259 | FabI Enoyl-[acyl-carrier-protein] | 82.2 | |
| cd01336 | 325 | MDH_cytoplasmic_cytosolic Cytoplasmic and cytosoli | 80.38 |
| >KOG1221|consensus | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-56 Score=468.99 Aligned_cols=350 Identities=37% Similarity=0.647 Sum_probs=330.2
Q ss_pred CCCCCCCCcCeEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccE
Q psy5825 228 AGPKCYPEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHV 307 (596)
Q Consensus 228 ~lL~~~~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ 307 (596)
-|||++|+|++||.|+|+++|.++.+|+...+...+|..++...|+.+ ++|..|.||+++++||+++.+++.++.+|++
T Consensus 31 klLr~~p~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l-~Kv~pi~GDi~~~~LGis~~D~~~l~~eV~i 109 (467)
T KOG1221|consen 31 KLLRTTPDVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEAL-EKVVPIAGDISEPDLGISESDLRTLADEVNI 109 (467)
T ss_pred HHHhcCcCcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccce-ecceeccccccCcccCCChHHHHHHHhcCCE
Confidence 378999999999999999999999999999998899999999989888 9999999999999999999999999999999
Q ss_pred EEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCC--ChHHHHHHHhcCC
Q psy5825 308 IIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLF--SYEDLAHVMQTTN 385 (596)
Q Consensus 308 ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~--~~~~~~~~~~~~~ 385 (596)
|||+||.++|+.++..+..+|+.||++++++|.++.+++.|||+||+++......+.|.+|+.+. +++.++....+++
T Consensus 110 vih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~~~l~~~vhVSTAy~n~~~~~i~E~~y~~~~~~~~~~~i~~~~~~~ 189 (467)
T KOG1221|consen 110 VIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEMVKLKALVHVSTAYSNCNVGHIEEKPYPMPETCNPEKILKLDENLS 189 (467)
T ss_pred EEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHhhhhheEEEeehhheecccccccccccCccccCCHHHHHhhhccch
Confidence 99999999999999999999999999999999999999999999999999777799999999876 8999999999999
Q ss_pred hHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceE
Q psy5825 386 QEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHT 465 (596)
Q Consensus 386 e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~ 465 (596)
++.++...+.+.++ |||+|..||++||++|.+.+.++|++|+||++|++.+.+|+|||+++.+|+.+++.++.+|.+++
T Consensus 190 ~~~ld~~~~~l~~~-~PNTYtfTKal~E~~i~~~~~~lPivIiRPsiI~st~~EP~pGWidn~~gp~g~i~g~gkGvlr~ 268 (467)
T KOG1221|consen 190 DELLDQKAPKLLGG-WPNTYTFTKALAEMVIQKEAENLPLVIIRPSIITSTYKEPFPGWIDNLNGPDGVIIGYGKGVLRC 268 (467)
T ss_pred HHHHHHhhHHhcCC-CCCceeehHhhHHHHHHhhccCCCeEEEcCCceeccccCCCCCccccCCCCceEEEEeccceEEE
Confidence 99999999999988 99999999999999999999999999999999999999999999999999999999999999999
Q ss_pred eecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHccCCc
Q psy5825 466 FYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGKCDE 545 (596)
Q Consensus 466 ~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~~~~ 545 (596)
+.++.+...|+||||+||++++++++..+... ......|||++++..++++|+++.+...+++.
T Consensus 269 ~~~d~~~~adiIPvD~vvN~~ia~~~~~~~~~-------------~~~~~~IY~~tss~~Np~t~~~~~e~~~~~~~--- 332 (467)
T KOG1221|consen 269 FLVDPKAVADIIPVDMVVNAMIASAWQHAGNS-------------KEKTPPIYHLTSSNDNPVTWGDFIELALRYFE--- 332 (467)
T ss_pred EEEccccccceeeHHHHHHHHHHHHHHHhccC-------------CCCCCcEEEecccccCcccHHHHHHHHHHhcc---
Confidence 99999999999999999999999987654321 00136699999999999999999999999998
Q ss_pred ccccccceEEeeeeeeccchHHHHHHHHHHHHHHHHHHHHHHHHhCCCCCC
Q psy5825 546 QYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLNKPPRI 596 (596)
Q Consensus 546 ~~~p~~~~~~~p~~~~~~~~~~~~l~~~~~~~~p~~~~d~~~~~~G~~p~~ 596 (596)
.+ |+...+|+|...+..+.|.|.++.+++|++|+|++|++++++|++|++
T Consensus 333 ~~-Pl~~~iw~P~~~~~sn~~~f~~~~~~~h~lPa~~~d~~~~i~g~k~~~ 382 (467)
T KOG1221|consen 333 KI-PLEKMIWYPFGTLTSNPWLFNLAAFLYHTLPAYILDLLLRLLGKKPRL 382 (467)
T ss_pred cC-CcccceeccCceeeecHhHHHHHHHHHHHhhHHHHHHHHHHhCCChhh
Confidence 77 999999999999999999999999999999999999999999999964
|
|
| >PLN02996 fatty acyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-49 Score=432.12 Aligned_cols=352 Identities=24% Similarity=0.370 Sum_probs=294.2
Q ss_pred CCCCCCCCCCCcCeEEEEeCCCCcccHHHHHH-HHhhhhhHHHhhhhhhhhh----cCcEEEEEeccCCCCCCCCHHH-H
Q psy5825 225 KSSAGPKCYPEVGGIYILLRSKKNKTVQERLA-EQFKDELFDRLKNEQADIL----QRKVHIISGDISQPSLGISSHD-Q 298 (596)
Q Consensus 225 ~~~~lL~~~~~v~~V~~LvR~~~~~~~~~Rl~-~~~~~~~~~~l~~~~~~~~----~~rv~~v~GDl~~~~lGL~~~~-~ 298 (596)
.+..||+.+++|.+||||+|+.++.++.+|+. .++...+|+.++...+..+ ..+++++.|||++++|||++.+ +
T Consensus 27 ll~~LL~~~~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~~i~GDl~~~~LGLs~~~~~ 106 (491)
T PLN02996 27 FVEKILRVQPNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVTPVPGDISYDDLGVKDSNLR 106 (491)
T ss_pred HHHHHHhhCCCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEEEEecccCCcCCCCChHHHH
Confidence 34467888899999999999999999999996 5667778876655443222 2689999999999999998876 6
Q ss_pred HHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc-cccccccCCCC-----
Q psy5825 299 QFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE-DIQEEFYPPLF----- 372 (596)
Q Consensus 299 ~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~-~i~E~~~~~~~----- 372 (596)
..+++++|+||||||.+++..++..++.+|+.||.+||++|..+.++++|||+||++|||... .+.|.+|+++.
T Consensus 107 ~~l~~~vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~~~~k~~V~vST~~vyG~~~~~i~E~~~~~~~~~~~~ 186 (491)
T PLN02996 107 EEMWKEIDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKCVKVKMLLHVSTAYVCGEKSGLILEKPFHMGETLNGN 186 (491)
T ss_pred HHHHhCCCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhcCCCCeEEEEeeeEEecCCCceeeeecCCCccccccc
Confidence 788899999999999999988888899999999999999999866789999999999998754 67788887544
Q ss_pred ---ChHH--------HHHHHhc-CChHHHHh------hhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccc
Q psy5825 373 ---SYED--------LAHVMQT-TNQEELEI------LSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVV 434 (596)
Q Consensus 373 ---~~~~--------~~~~~~~-~~e~~~~~------~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~ 434 (596)
++++ +.....+ +++..+.. +.+..... ++|+|+.||++||+++..+..++|++|+||++||
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~pn~Y~~TK~~aE~lv~~~~~~lpv~i~RP~~V~ 265 (491)
T PLN02996 187 RKLDINEEKKLVKEKLKELNEQDASEEEITQAMKDLGMERAKLHG-WPNTYVFTKAMGEMLLGNFKENLPLVIIRPTMIT 265 (491)
T ss_pred ccCChHHHHHHHHHHHHHHHhhcCCHHHHHHHhhhhchhHHHhCC-CCCchHhhHHHHHHHHHHhcCCCCEEEECCCEec
Confidence 3331 2222222 45544431 34444455 8899999999999999888789999999999999
Q ss_pred cCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCC
Q psy5825 435 STWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTD 514 (596)
Q Consensus 435 G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (596)
|++.+|++||+++++++..++..+..|.+..++|++++.+|||||||||++++++++...... ..
T Consensus 266 G~~~~p~~gwi~~~~~~~~i~~~~~~g~~~~~~gdg~~~~D~v~Vddvv~a~l~a~~~~~~~~---------------~~ 330 (491)
T PLN02996 266 STYKEPFPGWIEGLRTIDSVIVGYGKGKLTCFLADPNSVLDVIPADMVVNAMIVAMAAHAGGQ---------------GS 330 (491)
T ss_pred cCCcCCCCCcccchhhHHHHHHHhccceEeEEecCCCeecceecccHHHHHHHHHHHHhhccC---------------CC
Confidence 999999999999999988999888889888899999999999999999999999987632100 23
Q ss_pred CCeEEccCCCCCcccHHHHHHHHHHHccCCccccccc----ceEEeeeeeeccchHHHHHHHHHHHHHHHHHHHHHHH--
Q psy5825 515 PPVYNLSISSSYPITWLEYMNSVQAAGKCDEQYIASV----LAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLR-- 588 (596)
Q Consensus 515 ~~vyni~~~~~~~vt~~el~~~l~~~~~~~~~~~p~~----~~~~~p~~~~~~~~~~~~l~~~~~~~~p~~~~d~~~~-- 588 (596)
+.+|||+++..++++|.++++.+.++++ .+ |+. ..+|+|.+.++.+.++|.++.++.+++|++++|++.+
T Consensus 331 ~~vYNi~s~~~~~~s~~ei~~~~~~~~~---~~-p~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~lp~~~~~~~~~~~ 406 (491)
T PLN02996 331 EIIYHVGSSLKNPVKFSNLHDFAYRYFS---KN-PWINKEGSPVKVGKGTILSTMASFSLYMTIRYLLPLKALQLVNIIL 406 (491)
T ss_pred CcEEEecCCCCCcccHHHHHHHHHHHhh---hC-CCcCCCCCeEeeCCceecCcHHHHHHHHHHHHHhHHHHHHHHHHHh
Confidence 6799999887789999999999999998 78 887 5999999999999999999999999999999999988
Q ss_pred HhCCCCCC
Q psy5825 589 CLNKPPRI 596 (596)
Q Consensus 589 ~~G~~p~~ 596 (596)
+.|++|++
T Consensus 407 ~~~~~~~~ 414 (491)
T PLN02996 407 PKRYGDKY 414 (491)
T ss_pred hhccChHH
Confidence 67788753
|
|
| >PLN02503 fatty acyl-CoA reductase 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-47 Score=417.09 Aligned_cols=344 Identities=24% Similarity=0.388 Sum_probs=285.6
Q ss_pred cCCCCCCCCCCCCcCeEEEEeCCCCcccHHHHHH-HHhhhhhHHHhhhhhhhh----hcCcEEEEEeccCCCCCCCCHHH
Q psy5825 223 SHKSSAGPKCYPEVGGIYILLRSKKNKTVQERLA-EQFKDELFDRLKNEQADI----LQRKVHIISGDISQPSLGISSHD 297 (596)
Q Consensus 223 ~~~~~~lL~~~~~v~~V~~LvR~~~~~~~~~Rl~-~~~~~~~~~~l~~~~~~~----~~~rv~~v~GDl~~~~lGL~~~~ 297 (596)
++.+..||+.+++|++||||+|+.++.++.+|+. +++...+|+.++...+.. ...+|++|.|||++++|||++++
T Consensus 133 k~LlekLLr~~~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~~v~GDl~d~~LGLs~~~ 212 (605)
T PLN02503 133 KVLIEKILRTNPDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLVPVVGNVCESNLGLEPDL 212 (605)
T ss_pred HHHHHHHHHhCCCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEEEEEeeCCCcccCCCHHH
Confidence 3444578888899999999999999999999996 577788999887655432 12789999999999999999999
Q ss_pred HHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc-cccccccC-------
Q psy5825 298 QQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE-DIQEEFYP------- 369 (596)
Q Consensus 298 ~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~-~i~E~~~~------- 369 (596)
++.+++++|+||||||.+++..++..++.+||.||.+||++|..+.++++|||+||++|||... .+.|..|+
T Consensus 213 ~~~L~~~vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~~~lk~fV~vSTayVyG~~~G~i~E~~y~~~~~i~~ 292 (605)
T PLN02503 213 ADEIAKEVDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKCKKLKLFLQVSTAYVNGQRQGRIMEKPFRMGDCIAR 292 (605)
T ss_pred HHHHHhcCCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHcCCCCeEEEccCceeecCCCCeeeeeecCccccccc
Confidence 9999999999999999999998899999999999999999999876788999999999999874 88999886
Q ss_pred ------------CCCChHHHHHHH----h--cCChHHHHh-----hhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEE
Q psy5825 370 ------------PLFSYEDLAHVM----Q--TTNQEELEI-----LSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLA 426 (596)
Q Consensus 370 ------------~~~~~~~~~~~~----~--~~~e~~~~~-----~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~ 426 (596)
++++++..+.+. . +.++...+. +++...++ |||+|+.||++||++|+++..+||++
T Consensus 293 ~~~~~~~~~~~~~~~d~~~~~~~~~d~~~~~~~~~~~~~~l~~~g~~~~~~~~-~pNtYt~TK~lAE~lV~~~~~~LPv~ 371 (605)
T PLN02503 293 ELGISNSLPHNRPALDIEAEIKLALDSKRHGFQSNSFAQKMKDLGLERAKLYG-WQDTYVFTKAMGEMVINSMRGDIPVV 371 (605)
T ss_pred ccccccccccccccCCHHHHHHHHHHhhhcccchHHHHHHhhhcccchhhhCC-CCChHHHHHHHHHHHHHHhcCCCCEE
Confidence 456787777654 1 122222222 45566677 99999999999999999877899999
Q ss_pred EecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASL 506 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~ 506 (596)
|+||++|.+.+.+|+|||+++......++..+..|.++.++++++..+|+||||+||++++++++......
T Consensus 372 IvRPsiV~st~~eP~pGw~d~~~~~~p~~~~~g~G~lr~~~~~~~~~~DiVPVD~vvna~i~a~a~~~~~~--------- 442 (605)
T PLN02503 372 IIRPSVIESTWKDPFPGWMEGNRMMDPIVLYYGKGQLTGFLADPNGVLDVVPADMVVNATLAAMAKHGGAA--------- 442 (605)
T ss_pred EEcCCEecccccCCccccccCccccchhhhheeccceeEEEeCCCeeEeEEeecHHHHHHHHHHHhhhccc---------
Confidence 99999999999999999999955445555555688898899999999999999999999999965422110
Q ss_pred CCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHccCCcccccccceEEeeeeeeccchHHHHHHHHHHHHHHHHHHHHH
Q psy5825 507 VAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTV 586 (596)
Q Consensus 507 ~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~~~~~~~p~~~~~~~p~~~~~~~~~~~~l~~~~~~~~p~~~~d~~ 586 (596)
...+.+|||+++..+|++|.++++.+.+++. .+ |+....|+|. ..+...+++.++.|+.|+ ++|++
T Consensus 443 -----~~~~~vYn~ts~~~nP~t~~~~~~~~~~~~~---~~-P~~~~~~~~~-~~~~~~~~~~~~~~~~h~----~~d~~ 508 (605)
T PLN02503 443 -----KPEINVYQIASSVVNPLVFQDLARLLYEHYK---SS-PYMDSKGRPI-HVPPMKLFSSMEDFSSHL----WRDAL 508 (605)
T ss_pred -----CCCCCEEEeCCCCCCCeEHHHHHHHHHHHHh---hC-CcccccCcce-eccCceehhhHHHHHHHH----HHHHH
Confidence 0247899999888899999999999999998 77 9888899987 447777788888888774 67777
Q ss_pred HHHh
Q psy5825 587 LRCL 590 (596)
Q Consensus 587 ~~~~ 590 (596)
+++.
T Consensus 509 ~~~~ 512 (605)
T PLN02503 509 LRSG 512 (605)
T ss_pred HHHh
Confidence 7775
|
|
| >PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-37 Score=311.20 Aligned_cols=233 Identities=31% Similarity=0.477 Sum_probs=148.7
Q ss_pred CCCCCCCCCCCcCeEEEEeCCCCcccHHHHHHHHhh-hhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc
Q psy5825 225 KSSAGPKCYPEVGGIYILLRSKKNKTVQERLAEQFK-DELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH 303 (596)
Q Consensus 225 ~~~~lL~~~~~v~~V~~LvR~~~~~~~~~Rl~~~~~-~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~ 303 (596)
.+..||...+++ +||||+|+.+...+.+|+.+.+. +.+|..+.. ... ++|++|.|||++++|||++.+|..|.+
T Consensus 12 ll~~Ll~~~~~~-~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~---~~~-~ri~~v~GDl~~~~lGL~~~~~~~L~~ 86 (249)
T PF07993_consen 12 LLEELLRQPPDV-KIYCLVRASSSQSALERLKDALKEYGLWDDLDK---EAL-SRIEVVEGDLSQPNLGLSDEDYQELAE 86 (249)
T ss_dssp HHHHHHHHS-TT-EEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-H---HHT-TTEEEEE--TTSGGGG--HHHHHHHHH
T ss_pred HHHHHHcCCCCc-EEEEEEeCcccccchhhhhhhcccccchhhhhh---hhh-ccEEEEeccccccccCCChHHhhcccc
Confidence 344566665666 99999999888889999988665 555554321 123 899999999999999999999999999
Q ss_pred cccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc-cccccccCCCCChHHHHHHHh
Q psy5825 304 HIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQ 382 (596)
Q Consensus 304 ~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~ 382 (596)
.+|+||||||.++|..+|..++.+||.||.+||++|..+ +.++|||+||+++.+... .+.|..++
T Consensus 87 ~v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-~~~~~~~iSTa~v~~~~~~~~~~~~~~------------- 152 (249)
T PF07993_consen 87 EVDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-KRKRFHYISTAYVAGSRPGTIEEKVYP------------- 152 (249)
T ss_dssp H--EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-S---EEEEEEGGGTTS-TTT--SSS-H-------------
T ss_pred ccceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-cCcceEEeccccccCCCCCcccccccc-------------
Confidence 999999999999999999999999999999999999973 555999999977766543 23222110
Q ss_pred cCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCC-CcHHHHHHHH
Q psy5825 383 TTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLY-GPGGAAAGAA 459 (596)
Q Consensus 383 ~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~-~~~~l~~~~~ 459 (596)
........... ++|+|++|||+||++|++++ .|+|++|+|||+|+|... +||.+... ++..++..+.
T Consensus 153 ------~~~~~~~~~~~-~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~---~G~~~~~~~~~~~~~~~~~ 222 (249)
T PF07993_consen 153 ------EEEDDLDPPQG-FPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSR---TGWWNSDDFFPYLLRSCIA 222 (249)
T ss_dssp ------HH--EEE--TT-SEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSS---SS---TTBHHHHHHHHHHH
T ss_pred ------cccccchhhcc-CCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCC---CceeeccchHHHHHHHHHH
Confidence 00001111122 67899999999999999998 599999999999999644 67777766 3334444455
Q ss_pred hccceEeecCCCCccccccHHHHHHHH
Q psy5825 460 LGLIHTFYAKHDKKCDLIPVDVATNMM 486 (596)
Q Consensus 460 ~g~~~~~~~~~~~~~d~ipVDdva~ai 486 (596)
.|.++.++++.+..+||+|||+||++|
T Consensus 223 ~~~~p~~~~~~~~~~d~vPVD~va~aI 249 (249)
T PF07993_consen 223 LGAFPDLPGDPDARLDLVPVDYVARAI 249 (249)
T ss_dssp H-EEES-SB---TT--EEEHHHHHHHH
T ss_pred cCCcccccCCCCceEeEECHHHHHhhC
Confidence 666666777777889999999999986
|
A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A. |
| >COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-34 Score=289.83 Aligned_cols=269 Identities=18% Similarity=0.203 Sum_probs=192.4
Q ss_pred CCCCCCCCCcCeEEEEeCCCCcccHHHHHHHHhh-hhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccc
Q psy5825 227 SAGPKCYPEVGGIYILLRSKKNKTVQERLAEQFK-DELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHI 305 (596)
Q Consensus 227 ~~lL~~~~~v~~V~~LvR~~~~~~~~~Rl~~~~~-~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~v 305 (596)
.-||...+ .+||||||+.+.+.|.+||++.+. +..|+. ...+||+++.|||+.+.+||+...|+.|.++|
T Consensus 18 ~eLL~~~~--~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e-------~~~~ri~vv~gDl~e~~lGL~~~~~~~La~~v 88 (382)
T COG3320 18 LELLDRSD--AKVICLVRAQSDEAALARLEKTFDLYRHWDE-------LSADRVEVVAGDLAEPDLGLSERTWQELAENV 88 (382)
T ss_pred HHHHhcCC--CcEEEEEecCCHHHHHHHHHHHhhhhhhhhh-------hhcceEEEEecccccccCCCCHHHHHHHhhhc
Confidence 34555444 689999999999999999999887 444442 22389999999999999999999999999999
Q ss_pred cEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCC
Q psy5825 306 HVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTN 385 (596)
Q Consensus 306 d~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~ 385 (596)
|+|||+||.|+|..+|..++.+||.||..+|++|.. ++.+.|+||||++|+........+. + ++
T Consensus 89 D~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~-gk~Kp~~yVSsisv~~~~~~~~~~~-----~----------~~ 152 (382)
T COG3320 89 DLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAAT-GKPKPLHYVSSISVGETEYYSNFTV-----D----------FD 152 (382)
T ss_pred ceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhc-CCCceeEEEeeeeeccccccCCCcc-----c----------cc
Confidence 999999999999999999999999999999999998 7889999999999987533111100 0 00
Q ss_pred hHHHHhhhhh-hcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc
Q psy5825 386 QEELEILSSM-LFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI 463 (596)
Q Consensus 386 e~~~~~~~p~-~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~ 463 (596)
...+. ..+.++.+||++|||+||.+|+.+. .|+|++|+|||+|.|++.+ |..+...++++|+..+.. +
T Consensus 153 -----~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~t---G~~n~~D~~~Rlv~~~~~--l 222 (382)
T COG3320 153 -----EISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRT---GALNTRDFLTRLVLGLLQ--L 222 (382)
T ss_pred -----cccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCcc---CccccchHHHHHHHHHHH--h
Confidence 00010 0112267899999999999999999 9999999999999999874 433333444455544432 2
Q ss_pred eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHH
Q psy5825 464 HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQA 539 (596)
Q Consensus 464 ~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~ 539 (596)
..+| +....++++|||+++.+++..+....... .+ .... +......|+ .+.....+.+.++++++..
T Consensus 223 g~~P-~~~~~~~~~p~~~v~~~v~~~~~~~~~~~-~~---l~~~---~~~~f~~~~-~~~~~~~i~l~~~~~w~~~ 289 (382)
T COG3320 223 GIAP-DSEYSLDMLPVDHVARAVVAPSVQVAEAI-AA---LGAH---SDIRFNQLH-MLTHPDEIGLDEYVDWLIS 289 (382)
T ss_pred CCCC-CcccchhhCccceeeEEeehhhhhHHHHH-HH---hccC---ccchhhhee-cccCCCccchhHHHHhHhh
Confidence 3344 35567788888887777666554432000 00 0000 001223455 2222278999999999887
|
|
| >COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.97 E-value=1.9e-29 Score=248.01 Aligned_cols=246 Identities=18% Similarity=0.168 Sum_probs=186.9
Q ss_pred EEeCCCCcccHHHHHHHHhhh----hhHHHhhhhhhhhhcCc--EEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcC
Q psy5825 241 ILLRSKKNKTVQERLAEQFKD----ELFDRLKNEQADILQRK--VHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAA 312 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~----~~~~~l~~~~~~~~~~r--v~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~A 312 (596)
+||.+..|.-+..-+.+++.. -++|.|...+...+ .+ +.|+.|||.|..+ +++++. .+|.|||+|
T Consensus 3 iLVtGGAGYIGSHtv~~Ll~~G~~vvV~DNL~~g~~~~v-~~~~~~f~~gDi~D~~~------L~~vf~~~~idaViHFA 75 (329)
T COG1087 3 VLVTGGAGYIGSHTVRQLLKTGHEVVVLDNLSNGHKIAL-LKLQFKFYEGDLLDRAL------LTAVFEENKIDAVVHFA 75 (329)
T ss_pred EEEecCcchhHHHHHHHHHHCCCeEEEEecCCCCCHHHh-hhccCceEEeccccHHH------HHHHHHhcCCCEEEECc
Confidence 566666666666666665553 34566655555555 44 5899999998766 777775 589999999
Q ss_pred ccCChhhh---HHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChH
Q psy5825 313 ASLRFDEL---IQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQE 387 (596)
Q Consensus 313 A~v~~~~~---~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~ 387 (596)
|......+ +..++..||.||++||++|.+ .++++|||.||++|||... +|.|+...
T Consensus 76 a~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~-~gv~~~vFSStAavYG~p~~~PI~E~~~~------------------ 136 (329)
T COG1087 76 ASISVGESVQNPLKYYDNNVVGTLNLIEAMLQ-TGVKKFIFSSTAAVYGEPTTSPISETSPL------------------ 136 (329)
T ss_pred cccccchhhhCHHHHHhhchHhHHHHHHHHHH-hCCCEEEEecchhhcCCCCCcccCCCCCC------------------
Confidence 98765443 446899999999999999999 6899999999999999865 44443211
Q ss_pred HHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccc-cCCCCCCcHHHHHHHHhccce
Q psy5825 388 ELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVG-WSNNLYGPGGAAAGAALGLIH 464 (596)
Q Consensus 388 ~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G-~~~~~~~~~~l~~~~~~g~~~ 464 (596)
. ..|+||.||++.|+++..+. .++.+++||.+++.|+...+..| |..+..-...+++.++.|...
T Consensus 137 -----------~-p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~G~iGe~~~~~thLip~~~q~A~G~r~ 204 (329)
T COG1087 137 -----------A-PINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPDGTLGQRYPGATLLIPVAAEAALGKRD 204 (329)
T ss_pred -----------C-CCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCCCccCCCCCCcchHHHHHHHHHhcCCc
Confidence 1 34789999999999999988 88999999999999998766444 222222333455555666543
Q ss_pred --Eeec------CCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHH
Q psy5825 465 --TFYA------KHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNS 536 (596)
Q Consensus 465 --~~~~------~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~ 536 (596)
.++| |+.+.+|+|||.|+|+|.++++...... ....+|||++| +..|+.|+++.
T Consensus 205 ~l~ifG~DY~T~DGT~iRDYIHV~DLA~aH~~Al~~L~~~----------------g~~~~~NLG~G--~G~SV~evi~a 266 (329)
T COG1087 205 KLFIFGDDYDTKDGTCIRDYIHVDDLADAHVLALKYLKEG----------------GSNNIFNLGSG--NGFSVLEVIEA 266 (329)
T ss_pred eeEEeCCCCCCCCCCeeeeeeehhHHHHHHHHHHHHHHhC----------------CceeEEEccCC--CceeHHHHHHH
Confidence 2333 5788999999999999999999876541 23369999999 99999999999
Q ss_pred HHHHcc
Q psy5825 537 VQAAGK 542 (596)
Q Consensus 537 l~~~~~ 542 (596)
+.+..+
T Consensus 267 ~~~vtg 272 (329)
T COG1087 267 AKKVTG 272 (329)
T ss_pred HHHHhC
Confidence 999998
|
|
| >COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.96 E-value=2.7e-28 Score=238.61 Aligned_cols=206 Identities=20% Similarity=0.140 Sum_probs=168.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChhhh---HHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFDEL---IQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~~~---~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
++..|++|||++..+ +.+++. .+|+|+|+||..+.+.+ +..+.++||.||.+||++|+......+||||
T Consensus 51 ~~~~fv~~DI~D~~~------v~~~~~~~~~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~~~~frf~HI 124 (340)
T COG1088 51 PRYRFVQGDICDREL------VDRLFKEYQPDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKYWGKFRFHHI 124 (340)
T ss_pred CCceEEeccccCHHH------HHHHHHhcCCCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHhcccceEEEe
Confidence 689999999998665 888887 58999999999876654 4569999999999999999984333599999
Q ss_pred cCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 352 STLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 352 SS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
||..|||....- +..+ ++.+| +. +.++|++||+.+..||+.|. +|+|++|.|
T Consensus 125 STDEVYG~l~~~-~~~F---------------------tE~tp-~~---PsSPYSASKAasD~lVray~~TYglp~~Itr 178 (340)
T COG1088 125 STDEVYGDLGLD-DDAF---------------------TETTP-YN---PSSPYSASKAASDLLVRAYVRTYGLPATITR 178 (340)
T ss_pred ccccccccccCC-CCCc---------------------ccCCC-CC---CCCCcchhhhhHHHHHHHHHHHcCCceEEec
Confidence 999999975411 0001 01111 00 33679999999999999999 999999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
+++-|||.+.|. ..+..++..++.|....++|+|.+.+||+||+|-|+||-.++...
T Consensus 179 cSNNYGPyqfpE-------KlIP~~I~nal~g~~lpvYGdG~~iRDWl~VeDh~~ai~~Vl~kg---------------- 235 (340)
T COG1088 179 CSNNYGPYQFPE-------KLIPLMIINALLGKPLPVYGDGLQIRDWLYVEDHCRAIDLVLTKG---------------- 235 (340)
T ss_pred CCCCcCCCcCch-------hhhHHHHHHHHcCCCCceecCCcceeeeEEeHhHHHHHHHHHhcC----------------
Confidence 999999998763 334566777888887789999999999999999999999888764
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..|++|||+++ +..+--+++..|.+.++
T Consensus 236 ---~~GE~YNIgg~--~E~~Nlevv~~i~~~l~ 263 (340)
T COG1088 236 ---KIGETYNIGGG--NERTNLEVVKTICELLG 263 (340)
T ss_pred ---cCCceEEeCCC--ccchHHHHHHHHHHHhC
Confidence 35899999999 88899999999999998
|
|
| >PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones | Back alignment and domain information |
|---|
Probab=99.96 E-value=1.2e-27 Score=244.23 Aligned_cols=208 Identities=17% Similarity=0.190 Sum_probs=158.3
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhh--hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDE--LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~--~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
...++.|||+++. ++..+++++|+|||+||.+.... +.+.++.+||.||+|||++|.. .++++|||+||++
T Consensus 46 ~~~~~~~Di~d~~------~l~~a~~g~d~V~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~-~~VkrlVytSS~~ 118 (280)
T PF01073_consen 46 VKEYIQGDITDPE------SLEEALEGVDVVFHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARK-AGVKRLVYTSSIS 118 (280)
T ss_pred ceeEEEeccccHH------HHHHHhcCCceEEEeCccccccCcccHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcCcc
Confidence 3449999999765 49999999999999999987654 5667999999999999999998 6999999999999
Q ss_pred cccCC---ccc---cccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhc-----C--
Q psy5825 356 THSYR---EDI---QEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLY-----K-- 422 (596)
Q Consensus 356 v~g~~---~~i---~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~-----g-- 422 (596)
|++.. ..+ +|.. | .... +.+.|+.||++||++++++.. |
T Consensus 119 vv~~~~~~~~~~~~dE~~--------------------------~-~~~~-~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~ 170 (280)
T PF01073_consen 119 VVFDNYKGDPIINGDEDT--------------------------P-YPSS-PLDPYAESKALAEKAVLEANGSELKNGGR 170 (280)
T ss_pred eeEeccCCCCcccCCcCC--------------------------c-cccc-ccCchHHHHHHHHHHHHhhcccccccccc
Confidence 98861 111 1110 0 0011 446799999999999999862 3
Q ss_pred CCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCC
Q psy5825 423 LPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAP 502 (596)
Q Consensus 423 l~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~ 502 (596)
|.+++|||+.|||+.... ....++..+..|......|++....+|+||+|||.|+++|+........
T Consensus 171 l~t~~lRP~~IyGp~d~~---------~~~~~~~~~~~g~~~~~~g~~~~~~~~vyV~NvA~ahvlA~~~L~~~~~---- 237 (280)
T PF01073_consen 171 LRTCALRPAGIYGPGDQR---------LVPRLVKMVRSGLFLFQIGDGNNLFDFVYVENVAHAHVLAAQALLEPGK---- 237 (280)
T ss_pred eeEEEEeccEEeCccccc---------ccchhhHHHHhcccceeecCCCceECcEeHHHHHHHHHHHHHHhccccc----
Confidence 899999999999985421 1122333344454556677788899999999999999999875432100
Q ss_pred CCCcCCCCCCCCCCeEEccCCCCCccc-HHHHHHHHHHHcc
Q psy5825 503 PASLVAPIPRTDPPVYNLSISSSYPIT-WLEYMNSVQAAGK 542 (596)
Q Consensus 503 ~~~~~~~~~~~~~~vyni~~~~~~~vt-~~el~~~l~~~~~ 542 (596)
. ....|++|+|+++ .|+. +.+|+..+.+.++
T Consensus 238 ------~-~~~~G~~y~itd~--~p~~~~~~f~~~~~~~~G 269 (280)
T PF01073_consen 238 ------P-ERVAGQAYFITDG--EPVPSFWDFMRPLWEALG 269 (280)
T ss_pred ------c-ccCCCcEEEEECC--CccCcHHHHHHHHHHHCC
Confidence 0 0147999999999 8999 9999999988887
|
3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process |
| >PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional | Back alignment and domain information |
|---|
Probab=99.95 E-value=2.2e-26 Score=243.02 Aligned_cols=208 Identities=15% Similarity=0.091 Sum_probs=158.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.|||++.. .+..+++++|+|||+||..+.. .+...++.+|+.||.+||++|.. .++++|||+||
T Consensus 69 ~~~~~~~~Di~d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~-~~~~~~v~~SS 141 (348)
T PRK15181 69 SRFIFIQGDIRKFT------DCQKACKNVDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARD-AHVSSFTYAAS 141 (348)
T ss_pred CceEEEEccCCCHH------HHHHHhhCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeec
Confidence 46889999999643 4788889999999999976533 23445789999999999999998 58899999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
++|||... .+.|+. + .. ..+.|+.||+++|+++..+. .|++++++|
T Consensus 142 ~~vyg~~~~~~~~e~~--------------------------~---~~-p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR 191 (348)
T PRK15181 142 SSTYGDHPDLPKIEER--------------------------I---GR-PLSPYAVTKYVNELYADVFARSYEFNAIGLR 191 (348)
T ss_pred hHhhCCCCCCCCCCCC--------------------------C---CC-CCChhhHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 99998532 111110 0 00 23579999999999998877 799999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
|++|||+...+..++ . ..+..++..+..|....+++++.+.+|||||||+|+++++++......
T Consensus 192 ~~~vyGp~~~~~~~~-~--~~i~~~~~~~~~~~~i~~~g~g~~~rd~i~v~D~a~a~~~~~~~~~~~------------- 255 (348)
T PRK15181 192 YFNVFGRRQNPNGAY-S--AVIPRWILSLLKDEPIYINGDGSTSRDFCYIENVIQANLLSATTNDLA------------- 255 (348)
T ss_pred ecceeCcCCCCCCcc-c--cCHHHHHHHHHcCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhccccc-------------
Confidence 999999875432110 0 122345555566655566788899999999999999998876532110
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||+++ .++++.||++.+.+.++
T Consensus 256 ---~~~~~yni~~g--~~~s~~e~~~~i~~~~~ 283 (348)
T PRK15181 256 ---SKNKVYNVAVG--DRTSLNELYYLIRDGLN 283 (348)
T ss_pred ---CCCCEEEecCC--CcEeHHHHHHHHHHHhC
Confidence 24689999999 89999999999998775
|
|
| >TIGR01746 Thioester-redct thioester reductase domain | Back alignment and domain information |
|---|
Probab=99.94 E-value=3.4e-26 Score=241.92 Aligned_cols=250 Identities=21% Similarity=0.311 Sum_probs=180.0
Q ss_pred CeEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCC
Q psy5825 237 GGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLR 316 (596)
Q Consensus 237 ~~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~ 316 (596)
.+|+||+|..+...+.+|+.+.+....... ..... .+++++.||++++.+||+...+..+..++|+||||||.++
T Consensus 26 ~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~----~~~~~-~~v~~~~~D~~~~~~gl~~~~~~~~~~~~d~vih~a~~~~ 100 (367)
T TIGR01746 26 AKVICLVRAASEEHAMERLREALRSYRLWQ----EDLAR-ERIEVVAGDLSEPRLGLSDAEWERLAENVDTIVHNGALVN 100 (367)
T ss_pred CEEEEEEccCCHHHHHHHHHHHHHHhCCCC----chhhh-CCEEEEeCCcCcccCCcCHHHHHHHHhhCCEEEeCCcEec
Confidence 579999998765566777777554211100 00011 5799999999999999999999999999999999999999
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCcc--ccccccCCCCChHHHHHHHhcCChHHHHhhhh
Q psy5825 317 FDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRED--IQEEFYPPLFSYEDLAHVMQTTNQEELEILSS 394 (596)
Q Consensus 317 ~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~--i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p 394 (596)
+..++..++.+|+.|+.+|+++|.. .++++|||+||+++++.... +.++. . .. .+
T Consensus 101 ~~~~~~~~~~~nv~g~~~ll~~a~~-~~~~~~v~iSS~~v~~~~~~~~~~~~~-------------------~-~~--~~ 157 (367)
T TIGR01746 101 WVYPYSELRAANVLGTREVLRLAAS-GRAKPLHYVSTISVLAAIDLSTVTEDD-------------------A-IV--TP 157 (367)
T ss_pred cCCcHHHHhhhhhHHHHHHHHHHhh-CCCceEEEEccccccCCcCCCCccccc-------------------c-cc--cc
Confidence 8888888999999999999999998 57888999999999975321 11100 0 00 00
Q ss_pred hhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCc
Q psy5825 395 MLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473 (596)
Q Consensus 395 ~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~ 473 (596)
... +.++|+.||+++|.++..+. .|++++|+|||+|+|+... |..........++..+.. ...++......
T Consensus 158 --~~~-~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~~---g~~~~~~~~~~~~~~~~~--~~~~p~~~~~~ 229 (367)
T TIGR01746 158 --PPG-LAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSYT---GAINSSDILWRMVKGCLA--LGAYPDSPELT 229 (367)
T ss_pred --ccc-cCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCCC---CCCCchhHHHHHHHHHHH--hCCCCCCCccc
Confidence 001 34689999999999999887 7999999999999997442 221111111222222221 12233323346
Q ss_pred cccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHH
Q psy5825 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAA 540 (596)
Q Consensus 474 ~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~ 540 (596)
.+|+||||+|++++.++...... ..+++||++++ .+++|.+|+..+.+.
T Consensus 230 ~~~~~vddva~ai~~~~~~~~~~----------------~~~~~~~v~~~--~~~s~~e~~~~i~~~ 278 (367)
T TIGR01746 230 EDLTPVDYVARAIVALSSQPAAS----------------AGGPVFHVVNP--EPVSLDEFLEWLERA 278 (367)
T ss_pred cCcccHHHHHHHHHHHHhCCCcc----------------cCCceEEecCC--CCCCHHHHHHHHHHc
Confidence 78999999999999987653210 12689999998 899999999999983
|
It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold. |
| >KOG0747|consensus | Back alignment and domain information |
|---|
Probab=99.93 E-value=4.9e-26 Score=220.97 Aligned_cols=205 Identities=20% Similarity=0.189 Sum_probs=160.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--ccccEEEEcCccCChhhhHH---HHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--HHIHVIIHAAASLRFDELIQ---DAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--~~vd~ViH~AA~v~~~~~~~---~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.+..|+.||+.+..+ +..++ ..+|.|||.||..+....+. .+...|+.+|..||+.++..+++++|||+
T Consensus 57 p~ykfv~~di~~~~~------~~~~~~~~~id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~sg~i~~fvhv 130 (331)
T KOG0747|consen 57 PNYKFVEGDIADADL------VLYLFETEEIDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVSGNIRRFVHV 130 (331)
T ss_pred CCceEeeccccchHH------HHhhhccCchhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhccCeeEEEEe
Confidence 688999999997654 33333 46999999999987665542 46778999999999999998899999999
Q ss_pred cCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 352 STLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 352 SS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
||..|||+.. |+. ++. .... + ++.|+|+.||++||++++.+. .|+|++|+|
T Consensus 131 STdeVYGds~---~~~----------------~~~----E~s~-~---nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R 183 (331)
T KOG0747|consen 131 STDEVYGDSD---EDA----------------VVG----EASL-L---NPTNPYAASKAAAEMLVRSYGRSYGLPVVTTR 183 (331)
T ss_pred cccceecCcc---ccc----------------ccc----cccc-C---CCCCchHHHHHHHHHHHHHHhhccCCcEEEEe
Confidence 9999999754 110 010 0000 0 134789999999999999998 999999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
.++||||.+.+. ..+..|+.....|.-.++.|++...+.|+||+||++|+.+++...
T Consensus 184 ~nnVYGP~q~~~-------klipkFi~l~~~~~~~~i~g~g~~~rs~l~veD~~ea~~~v~~Kg---------------- 240 (331)
T KOG0747|consen 184 MNNVYGPNQYPE-------KLIPKFIKLAMRGKEYPIHGDGLQTRSYLYVEDVSEAFKAVLEKG---------------- 240 (331)
T ss_pred ccCccCCCcChH-------HHhHHHHHHHHhCCCcceecCcccceeeEeHHHHHHHHHHHHhcC----------------
Confidence 999999976432 122234443444555678899999999999999999999888763
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..|+||||+.. .+++..+++..|.+++.
T Consensus 241 ---~~geIYNIgtd--~e~~~~~l~k~i~eli~ 268 (331)
T KOG0747|consen 241 ---ELGEIYNIGTD--DEMRVIDLAKDICELFE 268 (331)
T ss_pred ---CccceeeccCc--chhhHHHHHHHHHHHHH
Confidence 35899999998 88999999999988776
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=99.93 E-value=2e-24 Score=231.40 Aligned_cols=232 Identities=12% Similarity=0.034 Sum_probs=154.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.+++++.|||++.. .+..++.++|+||||||.+.. .......+..|+.||.+||++|.+. + ++|||+||
T Consensus 65 ~~~~~~~~Dl~d~~------~l~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-~-~r~v~~SS 136 (386)
T PLN02427 65 GRIQFHRINIKHDS------RLEGLIKMADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-N-KRLIHFST 136 (386)
T ss_pred CCeEEEEcCCCChH------HHHHHhhcCCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-C-CEEEEEee
Confidence 47999999999754 488888899999999997643 2233346678999999999999883 4 89999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
++|||... .+.|+....+ ++... .+.+... ......... ..+.|+.||+++|++++.++ .|++++|+|
T Consensus 137 ~~vYg~~~~~~~~e~~p~~~-~~~~~-----~~~e~~~-~~~~~~~~~-~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR 208 (386)
T PLN02427 137 CEVYGKTIGSFLPKDHPLRQ-DPAFY-----VLKEDES-PCIFGSIEK-QRWSYACAKQLIERLIYAEGAENGLEFTIVR 208 (386)
T ss_pred eeeeCCCcCCCCCccccccc-ccccc-----ccccccc-ccccCCCCc-cccchHHHHHHHHHHHHHHHhhcCCceEEec
Confidence 99998632 2222210000 00000 0000000 000000001 23579999999999999876 799999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHH----HHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGA----AAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPAS 505 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l----~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~ 505 (596)
|++|||+....++|......+...+ +..+..|....+++++...++||||+|||++++.++.....
T Consensus 209 ~~~vyGp~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~g~g~~~r~~i~V~Dva~ai~~al~~~~~---------- 278 (386)
T PLN02427 209 PFNWIGPRMDFIPGIDGPSEGVPRVLACFSNNLLRREPLKLVDGGQSQRTFVYIKDAIEAVLLMIENPAR---------- 278 (386)
T ss_pred ccceeCCCCCccccccccccccchHHHHHHHHHhcCCCeEEECCCCceECcEeHHHHHHHHHHHHhCccc----------
Confidence 9999999754332210000111122 23344454445667778889999999999999998865321
Q ss_pred cCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 506 LVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 506 ~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++. ..+++.+|++.|.+.++
T Consensus 279 -------~~g~~yni~~~~-~~~s~~el~~~i~~~~g 307 (386)
T PLN02427 279 -------ANGHIFNVGNPN-NEVTVRQLAEMMTEVYA 307 (386)
T ss_pred -------ccCceEEeCCCC-CCccHHHHHHHHHHHhc
Confidence 146799999861 38999999999999877
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4e-24 Score=225.70 Aligned_cols=219 Identities=15% Similarity=0.117 Sum_probs=155.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
..++++.|||++.. ..+..++.++|+||||||.... ..+...++.+|+.||.+|+++|... + .+|||+||
T Consensus 46 ~~~~~~~~Dl~~~~-----~~~~~~~~~~d~ViH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-~-~~~v~~SS 118 (347)
T PRK11908 46 PRMHFFEGDITINK-----EWIEYHVKKCDVILPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPST 118 (347)
T ss_pred CCeEEEeCCCCCCH-----HHHHHHHcCCCEEEECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-C-CeEEEEec
Confidence 46899999998321 2366778899999999997542 2344567899999999999999983 4 79999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
++|||... .+.|+..+ +. ..| ... ..+.|+.||+++|++++.++ .+++++|+|
T Consensus 119 ~~vyg~~~~~~~~ee~~~-------------------~~-~~~--~~~-p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR 175 (347)
T PRK11908 119 SEVYGMCPDEEFDPEASP-------------------LV-YGP--INK-PRWIYACSKQLMDRVIWAYGMEEGLNFTLFR 175 (347)
T ss_pred ceeeccCCCcCcCccccc-------------------cc-cCc--CCC-ccchHHHHHHHHHHHHHHHHHHcCCCeEEEe
Confidence 99998532 12221100 00 000 001 23579999999999999987 899999999
Q ss_pred CCccccCCCCCccccCCCCC-CcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLY-GPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~-~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
|++|||+...+...-..... .+..++..+..|....+.+++.+.++||||+|+|++++.++......
T Consensus 176 ~~~v~Gp~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~g~~~r~~i~v~D~a~a~~~~~~~~~~~------------ 243 (347)
T PRK11908 176 PFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGEPISLVDGGSQKRAFTDIDDGIDALMKIIENKDGV------------ 243 (347)
T ss_pred eeeeeCCCccCCCccccCCcchHHHHHHHHhCCCceEEecCCceeeccccHHHHHHHHHHHHhCcccc------------
Confidence 99999987543211000011 12344445555554456677888999999999999999988653210
Q ss_pred CCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 509 PIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||+++ .+.+|+.|+++.|.+.++
T Consensus 244 ----~~g~~yni~~~-~~~~s~~e~~~~i~~~~~ 272 (347)
T PRK11908 244 ----ASGKIYNIGNP-KNNHSVRELANKMLELAA 272 (347)
T ss_pred ----CCCCeEEeCCC-CCCcCHHHHHHHHHHHhc
Confidence 24789999985 147999999999999887
|
|
| >TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=99.92 E-value=2.3e-24 Score=265.88 Aligned_cols=261 Identities=16% Similarity=0.230 Sum_probs=186.9
Q ss_pred CcCeEEEEeCCCCcccHHHHHHHHhhh-hhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCc
Q psy5825 235 EVGGIYILLRSKKNKTVQERLAEQFKD-ELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAA 313 (596)
Q Consensus 235 ~v~~V~~LvR~~~~~~~~~Rl~~~~~~-~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA 313 (596)
.+.+||||+|..+...+.+|+.+.+.. .+|. .... .+++++.|||+++.+||+...|..+..++|+||||||
T Consensus 998 ~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~------~~~~-~~i~~~~gDl~~~~lgl~~~~~~~l~~~~d~iiH~Aa 1070 (1389)
T TIGR03443 998 SNFKVFAHVRAKSEEAGLERLRKTGTTYGIWD------EEWA-SRIEVVLGDLSKEKFGLSDEKWSDLTNEVDVIIHNGA 1070 (1389)
T ss_pred CCcEEEEEECcCChHHHHHHHHHHHHHhCCCc------hhhh-cceEEEeccCCCccCCcCHHHHHHHHhcCCEEEECCc
Confidence 346899999987666677777765432 2221 1222 6899999999999999999999999999999999999
Q ss_pred cCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccc--cccccCCCCChHHHHHHHhcCChHHHHh
Q psy5825 314 SLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDI--QEEFYPPLFSYEDLAHVMQTTNQEELEI 391 (596)
Q Consensus 314 ~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i--~E~~~~~~~~~~~~~~~~~~~~e~~~~~ 391 (596)
.+++..++..+..+||.||.+||++|.. .++++|||+||++||+..... .+...... . ..+++...
T Consensus 1071 ~~~~~~~~~~~~~~nv~gt~~ll~~a~~-~~~~~~v~vSS~~v~~~~~~~~~~~~~~~~~-~--------~~~~e~~~-- 1138 (1389)
T TIGR03443 1071 LVHWVYPYSKLRDANVIGTINVLNLCAE-GKAKQFSFVSSTSALDTEYYVNLSDELVQAG-G--------AGIPESDD-- 1138 (1389)
T ss_pred EecCccCHHHHHHhHHHHHHHHHHHHHh-CCCceEEEEeCeeecCcccccchhhhhhhcc-C--------CCCCcccc--
Confidence 9999888888888999999999999998 578899999999999742210 00000000 0 00001000
Q ss_pred hhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhcc--ceEeec
Q psy5825 392 LSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGL--IHTFYA 468 (596)
Q Consensus 392 ~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~--~~~~~~ 468 (596)
..+. ... ..++|+.|||+||+++..+. .|++++|+|||+|||+...+. | ....++..++.+. +..++
T Consensus 1139 ~~~~-~~~-~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~g~--~-----~~~~~~~~~~~~~~~~~~~p- 1208 (1389)
T TIGR03443 1139 LMGS-SKG-LGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKTGA--T-----NTDDFLLRMLKGCIQLGLIP- 1208 (1389)
T ss_pred cccc-ccc-CCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCcCC--C-----CchhHHHHHHHHHHHhCCcC-
Confidence 0000 011 44789999999999999887 899999999999999866432 2 1233444444332 22233
Q ss_pred CCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 469 KHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 469 ~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+....++|+||||||++++.++...... ..+.+||++++ ..++|.+++..+...+.
T Consensus 1209 ~~~~~~~~~~Vddva~ai~~~~~~~~~~----------------~~~~i~~~~~~--~~~~~~~~~~~l~~~g~ 1264 (1389)
T TIGR03443 1209 NINNTVNMVPVDHVARVVVAAALNPPKE----------------SELAVAHVTGH--PRIRFNDFLGTLKTYGY 1264 (1389)
T ss_pred CCCCccccccHHHHHHHHHHHHhCCccc----------------CCCCEEEeCCC--CCCcHHHHHHHHHHhCC
Confidence 3556789999999999999998653210 23569999998 88999999999987644
|
Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal. |
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.92 E-value=4.6e-24 Score=244.05 Aligned_cols=213 Identities=23% Similarity=0.317 Sum_probs=161.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+++++.||++++.+|++...+..+ .++|+||||||.+++...+..++.+|+.||.+|+++|.. .++++|||+||++|
T Consensus 51 ~~v~~~~~Dl~~~~~~~~~~~~~~l-~~~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~-~~~~~~v~~SS~~v 128 (657)
T PRK07201 51 DRVVPLVGDLTEPGLGLSEADIAEL-GDIDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAER-LQAATFHHVSSIAV 128 (657)
T ss_pred CcEEEEecccCCccCCcCHHHHHHh-cCCCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHh-cCCCeEEEEecccc
Confidence 5799999999999999998888887 899999999999887777778899999999999999998 47899999999999
Q ss_pred ccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCcccc
Q psy5825 357 HSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVS 435 (596)
Q Consensus 357 ~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G 435 (596)
||... .+.|+.. .. + .. +.++|+.||+.+|+++... .|++++|+||++|||
T Consensus 129 ~g~~~~~~~e~~~---------------------~~--~---~~-~~~~Y~~sK~~~E~~~~~~-~g~~~~ilRp~~v~G 180 (657)
T PRK07201 129 AGDYEGVFREDDF---------------------DE--G---QG-LPTPYHRTKFEAEKLVREE-CGLPWRVYRPAVVVG 180 (657)
T ss_pred ccCccCccccccc---------------------hh--h---cC-CCCchHHHHHHHHHHHHHc-CCCcEEEEcCCeeee
Confidence 98532 1222110 00 0 01 3467999999999999754 589999999999999
Q ss_pred CCCCCccccCCCCCCcHHHHHHHHh-ccc---eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCC
Q psy5825 436 TWKEPIVGWSNNLYGPGGAAAGAAL-GLI---HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIP 511 (596)
Q Consensus 436 ~~~~p~~G~~~~~~~~~~l~~~~~~-g~~---~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~ 511 (596)
+... |..+.+.++..++..+.. +.. ..+++.+....+++||||||++++.++....
T Consensus 181 ~~~~---g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~vddva~ai~~~~~~~~----------------- 240 (657)
T PRK07201 181 DSRT---GEMDKIDGPYYFFKVLAKLAKLPSWLPMVGPDGGRTNIVPVDYVADALDHLMHKDG----------------- 240 (657)
T ss_pred cCCC---CccccCCcHHHHHHHHHHhccCCcccccccCCCCeeeeeeHHHHHHHHHHHhcCcC-----------------
Confidence 8653 333333332222111111 111 1233445677899999999999998875322
Q ss_pred CCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 512 RTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 512 ~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ ++++|.+|++.+.+.++
T Consensus 241 -~~g~~~ni~~~--~~~s~~el~~~i~~~~g 268 (657)
T PRK07201 241 -RDGQTFHLTDP--KPQRVGDIYNAFARAAG 268 (657)
T ss_pred -CCCCEEEeCCC--CCCcHHHHHHHHHHHhC
Confidence 25789999998 89999999999999987
|
|
| >PLN02166 dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.92 E-value=1.1e-23 Score=227.98 Aligned_cols=238 Identities=15% Similarity=0.100 Sum_probs=169.2
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--h--HHHh----hhhhhhh-hcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEE
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--L--FDRL----KNEQADI-LQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIH 310 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~--~~~l----~~~~~~~-~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH 310 (596)
-+||.+.+|.-+..-+..++... + +++. ....... ...++.++.+|+.+.. +.++|+|||
T Consensus 122 kILVTGatGFIGs~Lv~~Ll~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~~~~~Di~~~~-----------~~~~D~ViH 190 (436)
T PLN02166 122 RIVVTGGAGFVGSHLVDKLIGRGDEVIVIDNFFTGRKENLVHLFGNPRFELIRHDVVEPI-----------LLEVDQIYH 190 (436)
T ss_pred EEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCccHhHhhhhccCCceEEEECcccccc-----------ccCCCEEEE
Confidence 48888888888887777776532 1 1110 0000000 0136788889987543 347999999
Q ss_pred cCccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCC
Q psy5825 311 AAASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTN 385 (596)
Q Consensus 311 ~AA~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~ 385 (596)
|||.... ..+...++.+||.||.+||++|... ++ +|||+||++|||... .+.|+.+.
T Consensus 191 lAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~~E~~~~---------------- 252 (436)
T PLN02166 191 LACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLEHPQKETYWG---------------- 252 (436)
T ss_pred CceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECcHHHhCCCCCCCCCccccc----------------
Confidence 9997543 2345568899999999999999984 54 899999999999642 22332110
Q ss_pred hHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc
Q psy5825 386 QEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI 463 (596)
Q Consensus 386 e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~ 463 (596)
...|. . ..+.|+.||+++|++++.++ .+++++|+||++|||+..... .......++..+..|..
T Consensus 253 -----~~~p~---~-p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~~~~-----~~~~i~~~i~~~l~~~~ 318 (436)
T PLN02166 253 -----NVNPI---G-ERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRMCLD-----DGRVVSNFVAQTIRKQP 318 (436)
T ss_pred -----cCCCC---C-CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCCCCC-----ccchHHHHHHHHhcCCC
Confidence 00010 0 23569999999999999987 789999999999999864211 00112345566666655
Q ss_pred eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 464 HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 464 ~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++++.+.++||||+|+|++++.++... .+++|||+++ ..+|+.+|++.|.+.++
T Consensus 319 i~v~g~g~~~rdfi~V~Dva~ai~~~~~~~--------------------~~giyNIgs~--~~~Si~ela~~I~~~~g 375 (436)
T PLN02166 319 MTVYGDGKQTRSFQYVSDLVDGLVALMEGE--------------------HVGPFNLGNP--GEFTMLELAEVVKETID 375 (436)
T ss_pred cEEeCCCCeEEeeEEHHHHHHHHHHHHhcC--------------------CCceEEeCCC--CcEeHHHHHHHHHHHhC
Confidence 566788888999999999999999887531 2459999998 89999999999999887
|
|
| >KOG1430|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=7.8e-24 Score=218.36 Aligned_cols=244 Identities=16% Similarity=0.140 Sum_probs=180.3
Q ss_pred EEEEeCCCCcccHHHHHHHHhhhh------hHHHhhh--hhhh----hhcCcEEEEEeccCCCCCCCCHHHHHHHhcccc
Q psy5825 239 IYILLRSKKNKTVQERLAEQFKDE------LFDRLKN--EQAD----ILQRKVHIISGDISQPSLGISSHDQQFIQHHIH 306 (596)
Q Consensus 239 V~~LvR~~~~~~~~~Rl~~~~~~~------~~~~l~~--~~~~----~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd 306 (596)
=.|||.+++|.-++.-++.+++.. ++|.... .++. ..+.+++++.||+.+... +..+++++
T Consensus 5 ~~vlVtGG~GflG~hlv~~L~~~~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~~~~~D~~~~~~------i~~a~~~~- 77 (361)
T KOG1430|consen 5 LSVLVTGGSGFLGQHLVQALLENELKLEIRVVDKTPTQSNLPAELTGFRSGRVTVILGDLLDANS------ISNAFQGA- 77 (361)
T ss_pred CEEEEECCccHHHHHHHHHHHhcccccEEEEeccCccccccchhhhcccCCceeEEecchhhhhh------hhhhccCc-
Confidence 368888888888887777777653 2332111 0111 124789999999997665 78888999
Q ss_pred EEEEcCccCC--hhh-hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCcc---ccccccCCCCChHHHHHH
Q psy5825 307 VIIHAAASLR--FDE-LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRED---IQEEFYPPLFSYEDLAHV 380 (596)
Q Consensus 307 ~ViH~AA~v~--~~~-~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~---i~E~~~~~~~~~~~~~~~ 380 (596)
+|+||||... +.. ..+.++++||.||.+++++|.+ .++++|||+||++|+..... .+|+. |.
T Consensus 78 ~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~-~~v~~lIYtSs~~Vvf~g~~~~n~~E~~-p~---------- 145 (361)
T KOG1430|consen 78 VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKE-LGVKRLIYTSSAYVVFGGEPIINGDESL-PY---------- 145 (361)
T ss_pred eEEEeccccCccccccchhhheeecchhHHHHHHHHHH-hCCCEEEEecCceEEeCCeecccCCCCC-CC----------
Confidence 8888888643 333 3667899999999999999999 69999999999999876442 11210 00
Q ss_pred HhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHH
Q psy5825 381 MQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGA 458 (596)
Q Consensus 381 ~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~ 458 (596)
| .. +.+.|+.||..||++++.+. .+|.++++||..|||+... .....++..+
T Consensus 146 -------------p---~~-~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~---------~~~~~i~~~~ 199 (361)
T KOG1430|consen 146 -------------P---LK-HIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDK---------RLLPKIVEAL 199 (361)
T ss_pred -------------c---cc-cccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCc---------cccHHHHHHH
Confidence 0 11 55789999999999999998 6799999999999998542 2223445555
Q ss_pred HhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHH
Q psy5825 459 ALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQ 538 (596)
Q Consensus 459 ~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~ 538 (596)
..|......+++....||++++.||.|++.|+....... +...|++|+|+++ +++...+++..+.
T Consensus 200 ~~g~~~f~~g~~~~~~~~~~~~Nva~ahilA~~aL~~~~-------------~~~~Gq~yfI~d~--~p~~~~~~~~~l~ 264 (361)
T KOG1430|consen 200 KNGGFLFKIGDGENLNDFTYGENVAWAHILAARALLDKS-------------PSVNGQFYFITDD--TPVRFFDFLSPLV 264 (361)
T ss_pred HccCceEEeeccccccceEEechhHHHHHHHHHHHHhcC-------------CccCceEEEEeCC--CcchhhHHHHHHH
Confidence 566666667788899999999999999999987654211 1147999999999 8888777777888
Q ss_pred HHcc
Q psy5825 539 AAGK 542 (596)
Q Consensus 539 ~~~~ 542 (596)
..++
T Consensus 265 ~~lg 268 (361)
T KOG1430|consen 265 KALG 268 (361)
T ss_pred HhcC
Confidence 8777
|
|
| >KOG1502|consensus | Back alignment and domain information |
|---|
Probab=99.91 E-value=9e-24 Score=213.76 Aligned_cols=205 Identities=14% Similarity=0.150 Sum_probs=163.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhh--HHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDEL--IQDAFTLNIQATRELLDLATRCSQLKAILHVSTL 354 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~--~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~ 354 (596)
.++.++.+||.+++. |..++++||+|||+|+.+.++.. ..++...+|.||.|+|++|.....|+||||+||+
T Consensus 57 ~~l~l~~aDL~d~~s------f~~ai~gcdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~~sVkrvV~TSS~ 130 (327)
T KOG1502|consen 57 ERLKLFKADLLDEGS------FDKAIDGCDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKTKSVKRVVYTSST 130 (327)
T ss_pred ccceEEeccccccch------HHHHHhCCCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhccCCcceEEEeccH
Confidence 679999999999887 99999999999999999988654 4479999999999999999996679999999999
Q ss_pred ccccCC-c------cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCE
Q psy5825 355 YTHSYR-E------DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPL 425 (596)
Q Consensus 355 ~v~g~~-~------~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~ 425 (596)
++.... . .++|.. |-+.+.... ..+.|..||.+||+..|+++ .|++.
T Consensus 131 aAv~~~~~~~~~~~vvdE~~---------------wsd~~~~~~---------~~~~Y~~sK~lAEkaAw~fa~e~~~~l 186 (327)
T KOG1502|consen 131 AAVRYNGPNIGENSVVDEES---------------WSDLDFCRC---------KKLWYALSKTLAEKAAWEFAKENGLDL 186 (327)
T ss_pred HHhccCCcCCCCCccccccc---------------CCcHHHHHh---------hHHHHHHHHHHHHHHHHHHHHhCCccE
Confidence 887643 2 233322 222222211 12569999999999999999 88999
Q ss_pred EEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCC
Q psy5825 426 AMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPAS 505 (596)
Q Consensus 426 ~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~ 505 (596)
+++-|+.|+||...+ ..+....+++.++.|....+++ ..+.||||+|||.|++.+++.+..
T Consensus 187 v~inP~lV~GP~l~~------~l~~s~~~~l~~i~G~~~~~~n---~~~~~VdVrDVA~AHv~a~E~~~a---------- 247 (327)
T KOG1502|consen 187 VTINPGLVFGPGLQP------SLNSSLNALLKLIKGLAETYPN---FWLAFVDVRDVALAHVLALEKPSA---------- 247 (327)
T ss_pred EEecCCceECCCccc------ccchhHHHHHHHHhcccccCCC---CceeeEeHHHHHHHHHHHHcCccc----------
Confidence 999999999986543 2344466777888886655443 444599999999999999987643
Q ss_pred cCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 506 LVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 506 ~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+.|+|+++ .+.|.++++++...++
T Consensus 248 ---------~GRyic~~~---~~~~~ei~~~l~~~~P 272 (327)
T KOG1502|consen 248 ---------KGRYICVGE---VVSIKEIADILRELFP 272 (327)
T ss_pred ---------CceEEEecC---cccHHHHHHHHHHhCC
Confidence 578999986 4559999999999998
|
|
| >PLN02206 UDP-glucuronate decarboxylase | Back alignment and domain information |
|---|
Probab=99.91 E-value=5.1e-23 Score=223.09 Aligned_cols=238 Identities=16% Similarity=0.100 Sum_probs=167.0
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hH--HHh----hhhhhh-hhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEE
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LF--DRL----KNEQAD-ILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIH 310 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~--~~l----~~~~~~-~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH 310 (596)
-+||.+..|.-+..-+..++... ++ ++. ...... ....++.++.+|+.++. +.++|+|||
T Consensus 121 kILVTGatGfIGs~Lv~~Ll~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~~i~~D~~~~~-----------l~~~D~ViH 189 (442)
T PLN02206 121 RVVVTGGAGFVGSHLVDRLMARGDSVIVVDNFFTGRKENVMHHFSNPNFELIRHDVVEPI-----------LLEVDQIYH 189 (442)
T ss_pred EEEEECcccHHHHHHHHHHHHCcCEEEEEeCCCccchhhhhhhccCCceEEEECCccChh-----------hcCCCEEEE
Confidence 47788888888877777766532 11 110 000000 11246888889987542 347999999
Q ss_pred cCccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCC
Q psy5825 311 AAASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTN 385 (596)
Q Consensus 311 ~AA~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~ 385 (596)
|||.... ..+...++.+|+.||.+||++|... ++ +|||+||+.|||... ...|+.+.
T Consensus 190 lAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-g~-r~V~~SS~~VYg~~~~~p~~E~~~~---------------- 251 (442)
T PLN02206 190 LACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-GA-RFLLTSTSEVYGDPLQHPQVETYWG---------------- 251 (442)
T ss_pred eeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-CC-EEEEECChHHhCCCCCCCCCccccc----------------
Confidence 9997642 2345568899999999999999984 54 899999999998632 12222110
Q ss_pred hHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc
Q psy5825 386 QEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI 463 (596)
Q Consensus 386 e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~ 463 (596)
...|. . ..+.|+.||+++|+++..++ .+++++|+||++|||+......+ ..+..++..+..+..
T Consensus 252 -----~~~P~---~-~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~~~~~~-----~~v~~~i~~~l~~~~ 317 (442)
T PLN02206 252 -----NVNPI---G-VRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRMCIDDG-----RVVSNFVAQALRKEP 317 (442)
T ss_pred -----cCCCC---C-ccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCCCcccc-----chHHHHHHHHHcCCC
Confidence 00010 0 23679999999999999887 78999999999999986421111 112345555555554
Q ss_pred eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 464 HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 464 ~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++++.+.++|+||+|+|++++.++... .+++|||+++ ..+++.||++.+.+.++
T Consensus 318 i~i~g~G~~~rdfi~V~Dva~ai~~a~e~~--------------------~~g~yNIgs~--~~~sl~Elae~i~~~~g 374 (442)
T PLN02206 318 LTVYGDGKQTRSFQFVSDLVEGLMRLMEGE--------------------HVGPFNLGNP--GEFTMLELAKVVQETID 374 (442)
T ss_pred cEEeCCCCEEEeEEeHHHHHHHHHHHHhcC--------------------CCceEEEcCC--CceeHHHHHHHHHHHhC
Confidence 467788888999999999999999887532 2458999998 89999999999999886
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=99.91 E-value=2e-23 Score=238.04 Aligned_cols=256 Identities=13% Similarity=0.104 Sum_probs=175.7
Q ss_pred EEEEeCCCCcccHHHHHHHHhhh---hh--HHHhhhhhhhhh-cCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcC
Q psy5825 239 IYILLRSKKNKTVQERLAEQFKD---EL--FDRLKNEQADIL-QRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAA 312 (596)
Q Consensus 239 V~~LvR~~~~~~~~~Rl~~~~~~---~~--~~~l~~~~~~~~-~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~A 312 (596)
-.+||.+.+|.-+..-+..++.. .+ +++......... ..+++++.|||+++.. .+..++.++|+|||||
T Consensus 316 ~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~~~~~gDl~d~~~-----~l~~~l~~~D~ViHlA 390 (660)
T PRK08125 316 TRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRFHFVEGDISIHSE-----WIEYHIKKCDVVLPLV 390 (660)
T ss_pred CEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCceEEEeccccCcHH-----HHHHHhcCCCEEEECc
Confidence 35888888888887777776642 12 221111111111 1368999999997431 2456778999999999
Q ss_pred ccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChH
Q psy5825 313 ASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQE 387 (596)
Q Consensus 313 A~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~ 387 (596)
|.... ......++++|+.||.+||++|... + ++|||+||.+|||... .++|+....+
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-~-~~~V~~SS~~vyg~~~~~~~~E~~~~~~---------------- 452 (660)
T PRK08125 391 AIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-N-KRIIFPSTSEVYGMCTDKYFDEDTSNLI---------------- 452 (660)
T ss_pred cccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-C-CeEEEEcchhhcCCCCCCCcCccccccc----------------
Confidence 97653 2334568899999999999999984 4 7999999999998532 2333211000
Q ss_pred HHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccC-CCCCCcHHHHHHHHhccce
Q psy5825 388 ELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWS-NNLYGPGGAAAGAALGLIH 464 (596)
Q Consensus 388 ~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~-~~~~~~~~l~~~~~~g~~~ 464 (596)
..| ... ..+.|+.||+++|+++..++ .|++++|+||++|||+...+..... ........++..+..|...
T Consensus 453 ----~~p--~~~-p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~~~~~~~~~~~~~i~~~i~~~~~~~~i 525 (660)
T PRK08125 453 ----VGP--INK-QRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI 525 (660)
T ss_pred ----cCC--CCC-CccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCccccccccccccchHHHHHHHhcCCCCe
Confidence 001 000 22579999999999999987 7999999999999998653211000 0001123344555555544
Q ss_pred EeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCC-cccHHHHHHHHHHHcc
Q psy5825 465 TFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSY-PITWLEYMNSVQAAGK 542 (596)
Q Consensus 465 ~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~-~vt~~el~~~l~~~~~ 542 (596)
.+++++.+.+|||||+|+|+++++++...... ..+++||++++ . .+++.+|++.+.+.++
T Consensus 526 ~~~g~g~~~rd~i~v~Dva~a~~~~l~~~~~~----------------~~g~iyni~~~--~~~~s~~el~~~i~~~~g 586 (660)
T PRK08125 526 KLVDGGKQKRCFTDIRDGIEALFRIIENKDNR----------------CDGQIINIGNP--DNEASIRELAEMLLASFE 586 (660)
T ss_pred EEeCCCceeeceeeHHHHHHHHHHHHhccccc----------------cCCeEEEcCCC--CCceeHHHHHHHHHHHhc
Confidence 56678889999999999999999988653210 24789999987 5 6999999999999887
|
|
| >PRK10217 dTDP-glucose 4,6-dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=6.1e-23 Score=217.29 Aligned_cols=202 Identities=18% Similarity=0.109 Sum_probs=154.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhc--------C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRC--------S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~--------~ 343 (596)
.++.++.+||+++. .+..++. ++|+||||||.+.... ....++.+|+.||.+|+++|... .
T Consensus 51 ~~~~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~ 124 (355)
T PRK10217 51 ERFAFEKVDICDRA------ELARVFTEHQPDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKK 124 (355)
T ss_pred CceEEEECCCcChH------HHHHHHhhcCCCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhccccccc
Confidence 36888999999754 3677776 4899999999875432 34568899999999999999862 3
Q ss_pred CCceEEEecCcccccCCc----cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 344 QLKAILHVSTLYTHSYRE----DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~----~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
++++|||+||.+|||... .+.|+. + .. ..+.|+.||+++|.++..+
T Consensus 125 ~~~~~i~~SS~~vyg~~~~~~~~~~E~~--------------------------~---~~-p~s~Y~~sK~~~e~~~~~~ 174 (355)
T PRK10217 125 SAFRFHHISTDEVYGDLHSTDDFFTETT--------------------------P---YA-PSSPYSASKASSDHLVRAW 174 (355)
T ss_pred CceEEEEecchhhcCCCCCCCCCcCCCC--------------------------C---CC-CCChhHHHHHHHHHHHHHH
Confidence 568999999999998532 122211 0 00 2367999999999999988
Q ss_pred h--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 420 L--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 420 ~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
+ .+++++|+||++|||+...+. .....++..+..|....+++++++.++||||+|+|.+|+.++...
T Consensus 175 ~~~~~~~~~i~r~~~v~Gp~~~~~-------~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~D~a~a~~~~~~~~---- 243 (355)
T PRK10217 175 LRTYGLPTLITNCSNNYGPYHFPE-------KLIPLMILNALAGKPLPVYGNGQQIRDWLYVEDHARALYCVATTG---- 243 (355)
T ss_pred HHHhCCCeEEEeeeeeeCCCCCcc-------cHHHHHHHHHhcCCCceEeCCCCeeeCcCcHHHHHHHHHHHHhcC----
Confidence 6 799999999999999864210 112334445555544456688899999999999999999888642
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||+++ +++++.++++.+.+.++
T Consensus 244 ---------------~~~~~yni~~~--~~~s~~~~~~~i~~~~~ 271 (355)
T PRK10217 244 ---------------KVGETYNIGGH--NERKNLDVVETICELLE 271 (355)
T ss_pred ---------------CCCCeEEeCCC--CcccHHHHHHHHHHHhc
Confidence 24679999999 89999999999999876
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.4e-22 Score=213.91 Aligned_cols=248 Identities=8% Similarity=0.041 Sum_probs=165.7
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hHHHhhhhhhhhh--cCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccC
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LFDRLKNEQADIL--QRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASL 315 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~~~l~~~~~~~~--~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v 315 (596)
-+||.+.+|.-+..-+..+...+ ++..-+....... ...+.++.||+++. ..+..++.++|+||||||.+
T Consensus 23 ~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~D~Vih~Aa~~ 96 (370)
T PLN02695 23 RICITGAGGFIASHIARRLKAEGHYIIASDWKKNEHMSEDMFCHEFHLVDLRVM------ENCLKVTKGVDHVFNLAADM 96 (370)
T ss_pred EEEEECCccHHHHHHHHHHHhCCCEEEEEEeccccccccccccceEEECCCCCH------HHHHHHHhCCCEEEEccccc
Confidence 45666776776665555554321 2110000000000 01257788999854 34677778999999999976
Q ss_pred Ch---h-hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHh
Q psy5825 316 RF---D-ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEI 391 (596)
Q Consensus 316 ~~---~-~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~ 391 (596)
.. . .....++..|+.||.+|+++|.. .++++|||+||++|||......+. ++ + .+...
T Consensus 97 ~~~~~~~~~~~~~~~~N~~~t~nll~aa~~-~~vk~~V~~SS~~vYg~~~~~~~~-~~--~------------~E~~~-- 158 (370)
T PLN02695 97 GGMGFIQSNHSVIMYNNTMISFNMLEAARI-NGVKRFFYASSACIYPEFKQLETN-VS--L------------KESDA-- 158 (370)
T ss_pred CCccccccCchhhHHHHHHHHHHHHHHHHH-hCCCEEEEeCchhhcCCccccCcC-CC--c------------CcccC--
Confidence 32 1 22344677899999999999998 578999999999999864311110 00 0 00000
Q ss_pred hhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCC-CCCcHHHHHHHHhc-cceEee
Q psy5825 392 LSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNN-LYGPGGAAAGAALG-LIHTFY 467 (596)
Q Consensus 392 ~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~-~~~~~~l~~~~~~g-~~~~~~ 467 (596)
.| .. ..+.|+.+|.++|++++.+. .|++++|+||++|||+... |... ...+..++..++.+ ....++
T Consensus 159 -~p---~~-p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~~----~~~~~~~~~~~~~~~~~~~~~~i~~~ 229 (370)
T PLN02695 159 -WP---AE-PQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFGT----WKGGREKAPAAFCRKALTSTDEFEMW 229 (370)
T ss_pred -CC---CC-CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCCC----ccccccccHHHHHHHHHcCCCCeEEe
Confidence 00 01 23679999999999999877 7999999999999998542 2111 11233455544432 333567
Q ss_pred cCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 468 AKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 468 ~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+++++.++||||+|+|++|+.++... .+++|||+++ ..+++.+|++.+.+..+
T Consensus 230 g~g~~~r~~i~v~D~a~ai~~~~~~~--------------------~~~~~nv~~~--~~~s~~el~~~i~~~~g 282 (370)
T PLN02695 230 GDGKQTRSFTFIDECVEGVLRLTKSD--------------------FREPVNIGSD--EMVSMNEMAEIALSFEN 282 (370)
T ss_pred CCCCeEEeEEeHHHHHHHHHHHHhcc--------------------CCCceEecCC--CceeHHHHHHHHHHHhC
Confidence 88899999999999999999876532 2568999999 89999999999988776
|
|
| >PRK10084 dTDP-glucose 4,6 dehydratase; Provisional | Back alignment and domain information |
|---|
Probab=99.90 E-value=2.9e-22 Score=211.87 Aligned_cols=214 Identities=19% Similarity=0.110 Sum_probs=152.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhc--------C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRC--------S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~--------~ 343 (596)
.+++++.+||++.. .+..++. ++|+||||||.++.. .....++.+|+.||.+|+++|... .
T Consensus 50 ~~~~~~~~Dl~d~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~ 123 (352)
T PRK10084 50 ERYVFEHADICDRA------ELDRIFAQHQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKK 123 (352)
T ss_pred CceEEEEecCCCHH------HHHHHHHhcCCCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccc
Confidence 45788999999653 4667665 489999999986532 234668999999999999999863 2
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--c
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--Y 421 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~ 421 (596)
++.+|||+||.+|||.... +.+..+....+ .+.|+ .+ .. ..+.|+.||+++|+++..++ .
T Consensus 124 ~~~~~i~~SS~~vyg~~~~-~~~~~~~~~~~--------~~~E~-----~~---~~-p~~~Y~~sK~~~E~~~~~~~~~~ 185 (352)
T PRK10084 124 NAFRFHHISTDEVYGDLPH-PDEVENSEELP--------LFTET-----TA---YA-PSSPYSASKASSDHLVRAWLRTY 185 (352)
T ss_pred cceeEEEecchhhcCCCCc-cccccccccCC--------Ccccc-----CC---CC-CCChhHHHHHHHHHHHHHHHHHh
Confidence 4679999999999985321 00000000000 00010 01 01 33679999999999999876 7
Q ss_pred CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCC
Q psy5825 422 KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVA 501 (596)
Q Consensus 422 gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~ 501 (596)
|++++|+|+++|||+...+. .....++..+..|....+++++++.++||||+|+|.+|+.++...
T Consensus 186 g~~~vilr~~~v~Gp~~~~~-------~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~a~~~~l~~~-------- 250 (352)
T PRK10084 186 GLPTIVTNCSNNYGPYHFPE-------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALYKVVTEG-------- 250 (352)
T ss_pred CCCEEEEeccceeCCCcCcc-------chHHHHHHHHhcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHhcC--------
Confidence 99999999999999854210 112234444454544456678889999999999999998887532
Q ss_pred CCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 502 PPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 502 ~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ +++++.++++.+.+.++
T Consensus 251 -----------~~~~~yni~~~--~~~s~~~~~~~i~~~~~ 278 (352)
T PRK10084 251 -----------KAGETYNIGGH--NEKKNLDVVLTICDLLD 278 (352)
T ss_pred -----------CCCceEEeCCC--CcCcHHHHHHHHHHHhc
Confidence 24689999999 88999999999998887
|
|
| >PLN02572 UDP-sulfoquinovose synthase | Back alignment and domain information |
|---|
Probab=99.90 E-value=1.5e-22 Score=219.76 Aligned_cols=222 Identities=12% Similarity=0.067 Sum_probs=150.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChhhh------HHHHHHHHHHHHHHHHHHHHhcCCCc-e
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFDEL------IQDAFTLNIQATRELLDLATRCSQLK-A 347 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~~~------~~~~~~~NV~GT~~LL~~a~~~~~vk-r 347 (596)
.++.++.|||+++. .+..+++ ++|+|||+||....... ....+++|+.||.+||++|.. .+++ +
T Consensus 113 ~~v~~v~~Dl~d~~------~v~~~l~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~-~gv~~~ 185 (442)
T PLN02572 113 KEIELYVGDICDFE------FLSEAFKSFEPDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKE-FAPDCH 185 (442)
T ss_pred CcceEEECCCCCHH------HHHHHHHhCCCCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHH-hCCCcc
Confidence 36899999999764 3777776 48999999987542211 133568999999999999998 4664 8
Q ss_pred EEEecCcccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 348 ILHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 348 fV~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
|||+||++|||... .++|...+ .+. ...++ .+..... ..+.|+.||+++|.++..++ .|++
T Consensus 186 ~V~~SS~~vYG~~~~~~~E~~i~--~~~--------~~~e~-----~~~~~~~-P~s~Yg~SK~a~E~l~~~~~~~~gl~ 249 (442)
T PLN02572 186 LVKLGTMGEYGTPNIDIEEGYIT--ITH--------NGRTD-----TLPYPKQ-ASSFYHLSKVHDSHNIAFTCKAWGIR 249 (442)
T ss_pred EEEEecceecCCCCCCCcccccc--ccc--------ccccc-----cccCCCC-CCCcchhHHHHHHHHHHHHHHhcCCC
Confidence 99999999999532 22222110 000 00000 0000001 23679999999999999887 7999
Q ss_pred EEEecCCccccCCCCCc---cccCC-----C-C-CCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 425 LAMVRPSIVVSTWKEPI---VGWSN-----N-L-YGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~---~G~~~-----~-~-~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
++++||++|||++..+. +..+. + + ..+..++..+..|....++|++.+.+|||||+|||++++.++....
T Consensus 250 ~v~lR~~~vyGp~~~~~~~~~~li~~~~~~~~~~~~i~~~~~~~~~g~~i~v~g~G~~~Rdfi~V~Dva~a~~~al~~~~ 329 (442)
T PLN02572 250 ATDLNQGVVYGVRTDETMMDEELINRLDYDGVFGTALNRFCVQAAVGHPLTVYGKGGQTRGFLDIRDTVRCIEIAIANPA 329 (442)
T ss_pred EEEEecccccCCCCcccccccccccccCcccchhhHHHHHHHHHhcCCCceecCCCCEEECeEEHHHHHHHHHHHHhChh
Confidence 99999999999875421 00000 0 0 1122344455556544567888999999999999999999886432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHH
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAA 540 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~ 540 (596)
.. ....+||+++ ..+++.+|++.|.++
T Consensus 330 ~~----------------g~~~i~Nigs---~~~si~el~~~i~~~ 356 (442)
T PLN02572 330 KP----------------GEFRVFNQFT---EQFSVNELAKLVTKA 356 (442)
T ss_pred hc----------------CceeEEEeCC---CceeHHHHHHHHHHH
Confidence 10 1135899975 369999999999998
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.1e-22 Score=229.12 Aligned_cols=207 Identities=21% Similarity=0.152 Sum_probs=154.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--ccccEEEEcCccCChhhh---HHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--HHIHVIIHAAASLRFDEL---IQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--~~vd~ViH~AA~v~~~~~---~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.|||+++.. +..++ .++|+||||||.+..... ...++.+|+.||.+|+++|...+.+++|||+
T Consensus 57 ~~v~~~~~Dl~d~~~------~~~~~~~~~~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~~~vkr~I~~ 130 (668)
T PLN02260 57 PNFKFVKGDIASADL------VNYLLITEGIDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVTGQIRRFIHV 130 (668)
T ss_pred CCeEEEECCCCChHH------HHHHHhhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEE
Confidence 478999999997653 55443 579999999998765432 3457899999999999999985458999999
Q ss_pred cCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 352 STLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 352 SS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
||++|||....- . +.+. .+ ..+. . ..+.|+.||+++|++++.+. .+++++|+|
T Consensus 131 SS~~vyg~~~~~---~-~~~~------------~E-----~~~~---~-p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR 185 (668)
T PLN02260 131 STDEVYGETDED---A-DVGN------------HE-----ASQL---L-PTNPYSATKAGAEMLVMAYGRSYGLPVITTR 185 (668)
T ss_pred cchHHhCCCccc---c-ccCc------------cc-----cCCC---C-CCCCcHHHHHHHHHHHHHHHHHcCCCEEEEC
Confidence 999999864210 0 0000 00 0010 0 23679999999999999887 799999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
|++|||+...+ . .....++..+..|....+++++.+.++||||+|+|++++.++...
T Consensus 186 ~~~VyGp~~~~-----~--~~i~~~~~~a~~g~~i~i~g~g~~~r~~ihV~Dva~a~~~~l~~~---------------- 242 (668)
T PLN02260 186 GNNVYGPNQFP-----E--KLIPKFILLAMQGKPLPIHGDGSNVRSYLYCEDVAEAFEVVLHKG---------------- 242 (668)
T ss_pred cccccCcCCCc-----c--cHHHHHHHHHhCCCCeEEecCCCceEeeEEHHHHHHHHHHHHhcC----------------
Confidence 99999985421 1 112234444455554456788888999999999999998887542
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||+++ ..+++.+|++.+.+.++
T Consensus 243 ---~~~~vyni~~~--~~~s~~el~~~i~~~~g 270 (668)
T PLN02260 243 ---EVGHVYNIGTK--KERRVIDVAKDICKLFG 270 (668)
T ss_pred ---CCCCEEEECCC--CeeEHHHHHHHHHHHhC
Confidence 24679999998 88999999999999887
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=4e-22 Score=210.16 Aligned_cols=203 Identities=16% Similarity=0.074 Sum_probs=149.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCC---ceE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQL---KAI 348 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~v---krf 348 (596)
.+++++.|||++.. .+..++.+ +|+||||||...... .....+.+|+.||.+||++|..+ ++ .+|
T Consensus 55 ~~~~~~~~Dl~d~~------~l~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~-~~~~~~~~ 127 (343)
T TIGR01472 55 ARMKLHYGDLTDSS------NLRRIIDEIKPTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL-GLIKSVKF 127 (343)
T ss_pred cceeEEEeccCCHH------HHHHHHHhCCCCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh-CCCcCeeE
Confidence 46899999999754 37777774 699999999865332 23346678999999999999983 44 489
Q ss_pred EEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 349 LHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 349 V~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
||+||++|||... .+.|+. +. . ..+.|+.||+++|.+++.++ .|++
T Consensus 128 v~~SS~~vyg~~~~~~~~E~~--------------------------~~---~-p~~~Y~~sK~~~e~~~~~~~~~~~~~ 177 (343)
T TIGR01472 128 YQASTSELYGKVQEIPQNETT--------------------------PF---Y-PRSPYAAAKLYAHWITVNYREAYGLF 177 (343)
T ss_pred EEeccHHhhCCCCCCCCCCCC--------------------------CC---C-CCChhHHHHHHHHHHHHHHHHHhCCc
Confidence 9999999999632 122211 00 0 23679999999999999887 6899
Q ss_pred EEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhcc-ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCC
Q psy5825 425 LAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGL-IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPP 503 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~ 503 (596)
+++.|+.++||+.... +.. ...+..++..+..|. ...++|++.+.+|||||+|+|++++.++...
T Consensus 178 ~~~~~~~~~~gp~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~V~D~a~a~~~~~~~~---------- 243 (343)
T TIGR01472 178 AVNGILFNHESPRRGE--NFV--TRKITRAAAKIKLGLQEKLYLGNLDAKRDWGHAKDYVEAMWLMLQQD---------- 243 (343)
T ss_pred eEEEeecccCCCCCCc--ccc--chHHHHHHHHHHcCCCCceeeCCCccccCceeHHHHHHHHHHHHhcC----------
Confidence 9999999999975310 000 011122333344453 3345688899999999999999999888542
Q ss_pred CCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 504 ASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 504 ~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++|||+++ .++|+.|+++.+.+.++
T Consensus 244 ----------~~~~yni~~g--~~~s~~e~~~~i~~~~g 270 (343)
T TIGR01472 244 ----------KPDDYVIATG--ETHSVREFVEVSFEYIG 270 (343)
T ss_pred ----------CCccEEecCC--CceeHHHHHHHHHHHcC
Confidence 2358999999 89999999999999887
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.5e-22 Score=207.17 Aligned_cols=204 Identities=10% Similarity=0.167 Sum_probs=148.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh--hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD--ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTL 354 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~ 354 (596)
.+++++.||++++.. +..+++++|+|||+||.+.+. .+...++.+|+.||.+||++|....++++|||+||+
T Consensus 56 ~~~~~~~~Dl~~~~~------~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~rvV~~SS~ 129 (322)
T PLN02986 56 ERLKLFKADLLEESS------FEQAIEGCDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKETPSVKRVILTSST 129 (322)
T ss_pred CceEEEecCCCCcch------HHHHHhCCCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhcCCccEEEEecch
Confidence 478999999998764 888889999999999986542 233457899999999999999874468999999998
Q ss_pred cccc--CCc-----cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCE
Q psy5825 355 YTHS--YRE-----DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPL 425 (596)
Q Consensus 355 ~v~g--~~~-----~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~ 425 (596)
++++ ... .++|+.+. . |..... ..+.|+.||+++|++++.+. .|+++
T Consensus 130 ~~~~~~~~~~~~~~~~~E~~~~---------------~--------p~~~~~-~~~~Y~~sK~~aE~~~~~~~~~~~~~~ 185 (322)
T PLN02986 130 AAVLFRQPPIEANDVVDETFFS---------------D--------PSLCRE-TKNWYPLSKILAENAAWEFAKDNGIDM 185 (322)
T ss_pred hheecCCccCCCCCCcCcccCC---------------C--------hHHhhc-cccchHHHHHHHHHHHHHHHHHhCCeE
Confidence 8653 211 12221110 0 000001 23679999999999999987 79999
Q ss_pred EEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCC
Q psy5825 426 AMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPAS 505 (596)
Q Consensus 426 ~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~ 505 (596)
+++||++|||+...+.. .....++..+..|.. +.+ ...++||||+|+|++++.++..+.
T Consensus 186 ~~lrp~~v~Gp~~~~~~------~~~~~~~~~~~~g~~--~~~--~~~~~~v~v~Dva~a~~~al~~~~----------- 244 (322)
T PLN02986 186 VVLNPGFICGPLLQPTL------NFSVELIVDFINGKN--LFN--NRFYRFVDVRDVALAHIKALETPS----------- 244 (322)
T ss_pred EEEcccceeCCCCCCCC------CccHHHHHHHHcCCC--CCC--CcCcceeEHHHHHHHHHHHhcCcc-----------
Confidence 99999999998654321 112345555555432 122 456799999999999999987542
Q ss_pred cCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 506 LVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 506 ~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++ + ..+++.+++++|.+.++
T Consensus 245 --------~~~~yni~-~--~~~s~~e~~~~i~~~~~ 270 (322)
T PLN02986 245 --------ANGRYIID-G--PIMSVNDIIDILRELFP 270 (322)
T ss_pred --------cCCcEEEe-c--CCCCHHHHHHHHHHHCC
Confidence 23489995 4 57999999999999886
|
|
| >COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.3e-22 Score=207.29 Aligned_cols=203 Identities=20% Similarity=0.226 Sum_probs=155.2
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccc-cEEEEcCccCChhhhH----HHHHHHHHHHHHHHHHHHHhcCCCceEEEec
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHI-HVIIHAAASLRFDELI----QDAFTLNIQATRELLDLATRCSQLKAILHVS 352 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~v-d~ViH~AA~v~~~~~~----~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vS 352 (596)
.+.++.+|+++... +..++..+ |+||||||.+...... ..++.+|+.||.+||++|.. .++++|||+|
T Consensus 43 ~~~~~~~d~~~~~~------~~~~~~~~~d~vih~aa~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~-~~~~~~v~~s 115 (314)
T COG0451 43 GVEFVVLDLTDRDL------VDELAKGVPDAVIHLAAQSSVPDSNASDPAEFLDVNVDGTLNLLEAARA-AGVKRFVFAS 115 (314)
T ss_pred ccceeeecccchHH------HHHHHhcCCCEEEEccccCchhhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeC
Confidence 57888999987643 67777888 9999999998755443 35899999999999999999 7899999999
Q ss_pred CcccccCCc---cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEE
Q psy5825 353 TLYTHSYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAM 427 (596)
Q Consensus 353 S~~v~g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~I 427 (596)
|.++++... .++|+. .+. . ..+.|+.||+++|++++.+. +|++++|
T Consensus 116 s~~~~~~~~~~~~~~E~~-------------------------~~~---~-p~~~Yg~sK~~~E~~~~~~~~~~~~~~~i 166 (314)
T COG0451 116 SVSVVYGDPPPLPIDEDL-------------------------GPP---R-PLNPYGVSKLAAEQLLRAYARLYGLPVVI 166 (314)
T ss_pred CCceECCCCCCCCccccc-------------------------CCC---C-CCCHHHHHHHHHHHHHHHHHHHhCCCeEE
Confidence 988887531 222221 000 0 22369999999999999998 6899999
Q ss_pred ecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc-eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q psy5825 428 VRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI-HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASL 506 (596)
Q Consensus 428 lRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~-~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~ 506 (596)
+||++|||+...+. +.. .....++..+..+.. ..+.+++...++|+||+|+|.+++.++....
T Consensus 167 lR~~~vyGp~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~------------ 230 (314)
T COG0451 167 LRPFNVYGPGDKPD--LSS--GVVSAFIRQLLKGEPIIVIGGDGSQTRDFVYVDDVADALLLALENPD------------ 230 (314)
T ss_pred EeeeeeeCCCCCCC--CCc--CcHHHHHHHHHhCCCcceEeCCCceeEeeEeHHHHHHHHHHHHhCCC------------
Confidence 99999999865432 100 122334444555553 4566677888999999999999999997643
Q ss_pred CCCCCCCCCCeEEccCCCCC-cccHHHHHHHHHHHcc
Q psy5825 507 VAPIPRTDPPVYNLSISSSY-PITWLEYMNSVQAAGK 542 (596)
Q Consensus 507 ~~~~~~~~~~vyni~~~~~~-~vt~~el~~~l~~~~~ 542 (596)
.+ +||++++ . .+++.+|++.+.+.++
T Consensus 231 -------~~-~~ni~~~--~~~~~~~e~~~~~~~~~~ 257 (314)
T COG0451 231 -------GG-VFNIGSG--TAEITVRELAEAVAEAVG 257 (314)
T ss_pred -------Cc-EEEeCCC--CCcEEHHHHHHHHHHHhC
Confidence 23 9999998 6 8999999999999888
|
|
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.89 E-value=5.2e-22 Score=205.93 Aligned_cols=202 Identities=20% Similarity=0.158 Sum_probs=153.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.||++++. .+..++.+ +|+||||||.+.... ....++.+|+.|+.+|+++|.......+|||+
T Consensus 50 ~~~~~~~~Dl~~~~------~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~i~~ 123 (317)
T TIGR01181 50 PRYRFVKGDIGDRE------LVSRLFTEHQPDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKYWHEFRFHHI 123 (317)
T ss_pred CCcEEEEcCCcCHH------HHHHHHhhcCCCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 46889999999764 47777877 899999999875432 34567899999999999999873222389999
Q ss_pred cCcccccCCcc---ccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEE
Q psy5825 352 STLYTHSYRED---IQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLA 426 (596)
Q Consensus 352 SS~~v~g~~~~---i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~ 426 (596)
||.+|||.... +.|.. +. . ..+.|+.+|+.+|+++..++ .+++++
T Consensus 124 Ss~~v~g~~~~~~~~~e~~--------------------------~~---~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 173 (317)
T TIGR01181 124 STDEVYGDLEKGDAFTETT--------------------------PL---A-PSSPYSASKAASDHLVRAYHRTYGLPAL 173 (317)
T ss_pred eccceeCCCCCCCCcCCCC--------------------------CC---C-CCCchHHHHHHHHHHHHHHHHHhCCCeE
Confidence 99999986431 21110 00 0 22569999999999999876 799999
Q ss_pred EecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASL 506 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~ 506 (596)
|+||++|||+...+ . .....++..+..|....+++++...++||||||+|+++..++...
T Consensus 174 i~R~~~i~G~~~~~-----~--~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~~~~~~~~~------------- 233 (317)
T TIGR01181 174 ITRCSNNYGPYQFP-----E--KLIPLMITNALAGKPLPVYGDGQQVRDWLYVEDHCRAIYLVLEKG------------- 233 (317)
T ss_pred EEEeccccCCCCCc-----c--cHHHHHHHHHhcCCCceEeCCCceEEeeEEHHHHHHHHHHHHcCC-------------
Confidence 99999999975421 1 112344555555544455677888999999999999998888542
Q ss_pred CCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 507 VAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 507 ~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ .++++.++++.|.+.++
T Consensus 234 ------~~~~~~~~~~~--~~~s~~~~~~~i~~~~~ 261 (317)
T TIGR01181 234 ------RVGETYNIGGG--NERTNLEVVETILELLG 261 (317)
T ss_pred ------CCCceEEeCCC--CceeHHHHHHHHHHHhC
Confidence 24679999998 88999999999999887
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.4e-21 Score=205.52 Aligned_cols=210 Identities=14% Similarity=0.133 Sum_probs=145.4
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh--hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD--ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
++.++.|||+++. .+..++.++|+||||||.+.+. .+...++.+|+.|+.+|+++|....++++|||+||++
T Consensus 60 ~~~~~~~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~~~~~~~v~~SS~~ 133 (338)
T PLN00198 60 DLKIFGADLTDEE------SFEAPIAGCDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKAKSVKRVILTSSAA 133 (338)
T ss_pred ceEEEEcCCCChH------HHHHHHhcCCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeecce
Confidence 6889999999764 3778888999999999976543 2334577999999999999998744689999999999
Q ss_pred cccCCc------cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEE
Q psy5825 356 THSYRE------DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAM 427 (596)
Q Consensus 356 v~g~~~------~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~I 427 (596)
+||... .+.|... ..........+ ..+.|+.||+++|++++.++ .|++++|
T Consensus 134 ~~g~~~~~~~~~~~~E~~~---------------~~~~~~~~~~~------p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ 192 (338)
T PLN00198 134 AVSINKLSGTGLVMNEKNW---------------TDVEFLTSEKP------PTWGYPASKTLAEKAAWKFAEENNIDLIT 192 (338)
T ss_pred eeeccCCCCCCceeccccC---------------CchhhhhhcCC------ccchhHHHHHHHHHHHHHHHHhcCceEEE
Confidence 998421 1222211 00001111000 23569999999999999987 6999999
Q ss_pred ecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeec-CC----CCccccccHHHHHHHHHHHHHhhhccCCCCCC
Q psy5825 428 VRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYA-KH----DKKCDLIPVDVATNMMLGVVWKTALDHGHVAP 502 (596)
Q Consensus 428 lRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~-~~----~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~ 502 (596)
+||++|||+...+. ......++..+..|....+.+ .+ +..+|||||||+|++++.++....
T Consensus 193 ~R~~~vyGp~~~~~------~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~V~D~a~a~~~~~~~~~-------- 258 (338)
T PLN00198 193 VIPTLMAGPSLTSD------IPSSLSLAMSLITGNEFLINGLKGMQMLSGSISITHVEDVCRAHIFLAEKES-------- 258 (338)
T ss_pred EeCCceECCCccCC------CCCcHHHHHHHHcCCccccccccccccccCCcceeEHHHHHHHHHHHhhCcC--------
Confidence 99999999875321 111123333444443222222 11 224799999999999998886531
Q ss_pred CCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 503 PASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 503 ~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++|+ +++ ..+++.++++.+.+.++
T Consensus 259 -----------~~~~~~-~~~--~~~s~~el~~~i~~~~~ 284 (338)
T PLN00198 259 -----------ASGRYI-CCA--ANTSVPELAKFLIKRYP 284 (338)
T ss_pred -----------cCCcEE-Eec--CCCCHHHHHHHHHHHCC
Confidence 234685 445 57899999999998775
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.89 E-value=7.3e-22 Score=208.08 Aligned_cols=202 Identities=12% Similarity=0.119 Sum_probs=147.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCc-c
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTL-Y 355 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~-~ 355 (596)
.++.++.+|++++. .+..++.++|+||||||.+. .....++.+|+.||.+|+++|.. .++++|||+||+ +
T Consensus 60 ~~~~~~~~Dl~d~~------~~~~~~~~~d~Vih~A~~~~--~~~~~~~~~nv~gt~~ll~aa~~-~~v~r~V~~SS~~a 130 (342)
T PLN02214 60 ERLILCKADLQDYE------ALKAAIDGCDGVFHTASPVT--DDPEQMVEPAVNGAKFVINAAAE-AKVKRVVITSSIGA 130 (342)
T ss_pred CcEEEEecCcCChH------HHHHHHhcCCEEEEecCCCC--CCHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEecccee
Confidence 36889999999765 38888899999999999863 34567889999999999999998 578999999996 5
Q ss_pred cccCCc-----cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEe
Q psy5825 356 THSYRE-----DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMV 428 (596)
Q Consensus 356 v~g~~~-----~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~Il 428 (596)
+||... .++|+.++ + .+ .+ .. ..+.|+.||+++|++++.++ .|++++|+
T Consensus 131 vyg~~~~~~~~~~~E~~~~---------------~---~~--~~---~~-p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~l 186 (342)
T PLN02214 131 VYMDPNRDPEAVVDESCWS---------------D---LD--FC---KN-TKNWYCYGKMVAEQAAWETAKEKGVDLVVL 186 (342)
T ss_pred eeccCCCCCCcccCcccCC---------------C---hh--hc---cc-cccHHHHHHHHHHHHHHHHHHHcCCcEEEE
Confidence 787422 12332110 0 00 00 01 23579999999999999987 79999999
Q ss_pred cCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 429 RPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 429 Rp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
||++|||+...+. .......+..+..|.... . ++..++||||+|||++++.++....
T Consensus 187 Rp~~vyGp~~~~~------~~~~~~~~~~~~~g~~~~-~--~~~~~~~i~V~Dva~a~~~al~~~~-------------- 243 (342)
T PLN02214 187 NPVLVLGPPLQPT------INASLYHVLKYLTGSAKT-Y--ANLTQAYVDVRDVALAHVLVYEAPS-------------- 243 (342)
T ss_pred eCCceECCCCCCC------CCchHHHHHHHHcCCccc-C--CCCCcCeeEHHHHHHHHHHHHhCcc--------------
Confidence 9999999865321 111122233344444322 2 3457899999999999999986532
Q ss_pred CCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 509 PIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .+++.+|++.|.+.++
T Consensus 244 -----~~g~yn~~~~---~~~~~el~~~i~~~~~ 269 (342)
T PLN02214 244 -----ASGRYLLAES---ARHRGEVVEILAKLFP 269 (342)
T ss_pred -----cCCcEEEecC---CCCHHHHHHHHHHHCC
Confidence 2458999864 5799999999999886
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.89 E-value=1.7e-21 Score=203.18 Aligned_cols=204 Identities=12% Similarity=0.192 Sum_probs=146.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh--hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD--ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTL 354 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~ 354 (596)
.+++++.||++++.. +..+++++|+|||+||.+... .+...++.+|+.||.+|+++|....++++|||+||+
T Consensus 55 ~~~~~~~~Dl~~~~~------~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~~~v~~SS~ 128 (322)
T PLN02662 55 ERLHLFKANLLEEGS------FDSVVDGCEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKVPSVKRVVVTSSM 128 (322)
T ss_pred CceEEEeccccCcch------HHHHHcCCCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEccCH
Confidence 478999999998764 888899999999999986432 233468899999999999999884378999999998
Q ss_pred cc--ccCCc-----cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCE
Q psy5825 355 YT--HSYRE-----DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPL 425 (596)
Q Consensus 355 ~v--~g~~~-----~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~ 425 (596)
++ |+... .++|+... .|..... ..+.|+.||+++|++++.++ .++++
T Consensus 129 ~~~~y~~~~~~~~~~~~E~~~~-----------------------~p~~~~~-~~~~Y~~sK~~~E~~~~~~~~~~~~~~ 184 (322)
T PLN02662 129 AAVAYNGKPLTPDVVVDETWFS-----------------------DPAFCEE-SKLWYVLSKTLAEEAAWKFAKENGIDM 184 (322)
T ss_pred HHhcCCCcCCCCCCcCCcccCC-----------------------ChhHhhc-ccchHHHHHHHHHHHHHHHHHHcCCcE
Confidence 74 54311 12221100 0100001 23579999999999999887 79999
Q ss_pred EEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCC
Q psy5825 426 AMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPAS 505 (596)
Q Consensus 426 ~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~ 505 (596)
+++||++|||+...+.. .....++..+..|.. . .+...++||||+|||++++.++....
T Consensus 185 ~~lRp~~v~Gp~~~~~~------~~~~~~~~~~~~~~~-~---~~~~~~~~i~v~Dva~a~~~~~~~~~----------- 243 (322)
T PLN02662 185 VTINPAMVIGPLLQPTL------NTSAEAILNLINGAQ-T---FPNASYRWVDVRDVANAHIQAFEIPS----------- 243 (322)
T ss_pred EEEeCCcccCCCCCCCC------CchHHHHHHHhcCCc-c---CCCCCcCeEEHHHHHHHHHHHhcCcC-----------
Confidence 99999999998653311 112233444444432 1 13467899999999999999886532
Q ss_pred cCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 506 LVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 506 ~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.++.||++ + .++++.|+++.+.+.++
T Consensus 244 --------~~~~~~~~-g--~~~s~~e~~~~i~~~~~ 269 (322)
T PLN02662 244 --------ASGRYCLV-E--RVVHYSEVVKILHELYP 269 (322)
T ss_pred --------cCCcEEEe-C--CCCCHHHHHHHHHHHCC
Confidence 23478887 4 57999999999999876
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=99.89 E-value=3.9e-21 Score=203.10 Aligned_cols=213 Identities=17% Similarity=0.117 Sum_probs=151.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.||++++. .+..++. ++|+||||||..... .....++.+|+.|+.+|+++|.. .++++|||+
T Consensus 58 ~~~~~~~~D~~~~~------~l~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~ 130 (352)
T PLN02240 58 DNLVFHKVDLRDKE------ALEKVFASTRFDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAK-HGCKKLVFS 130 (352)
T ss_pred ccceEEecCcCCHH------HHHHHHHhCCCCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEE
Confidence 46889999998654 4666665 689999999975432 23456889999999999999988 578899999
Q ss_pred cCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---cCCCEE
Q psy5825 352 STLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---YKLPLA 426 (596)
Q Consensus 352 SS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---~gl~~~ 426 (596)
||+++||... .+.|+.. . . ..+.|+.||+++|++++.++ .+++++
T Consensus 131 Ss~~vyg~~~~~~~~E~~~---------------------------~--~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ 180 (352)
T PLN02240 131 SSATVYGQPEEVPCTEEFP---------------------------L--S-ATNPYGRTKLFIEEICRDIHASDPEWKII 180 (352)
T ss_pred ccHHHhCCCCCCCCCCCCC---------------------------C--C-CCCHHHHHHHHHHHHHHHHHHhcCCCCEE
Confidence 9999998532 2333210 0 0 23679999999999998875 478999
Q ss_pred EecCCccccCCCCCccccCCCC--CCcHHHHHHHHhccce--Eeec------CCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNNL--YGPGGAAAGAALGLIH--TFYA------KHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~~--~~~~~l~~~~~~g~~~--~~~~------~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
++|+++|||++....-|..... .....++..+..+..+ .+.+ ++.+.++||||+|+|++++.++......
T Consensus 181 ~~R~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~D~a~a~~~a~~~~~~~ 260 (352)
T PLN02240 181 LLRYFNPVGAHPSGRIGEDPKGIPNNLMPYVQQVAVGRRPELTVFGNDYPTKDGTGVRDYIHVMDLADGHIAALRKLFTD 260 (352)
T ss_pred EEeecCcCCCCccccccCCCCCCcchHHHHHHHHHhCCCCceEEeCCCCCCCCCCEEEeeEEHHHHHHHHHHHHhhhhhc
Confidence 9999999998653322221110 1112334344434322 2222 5678899999999999999888653110
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
. ...+++||++++ +++|+.||++.+.+.++
T Consensus 261 ~--------------~~~~~~yni~~~--~~~s~~el~~~i~~~~g 290 (352)
T PLN02240 261 P--------------DIGCEAYNLGTG--KGTSVLEMVAAFEKASG 290 (352)
T ss_pred c--------------CCCCceEEccCC--CcEeHHHHHHHHHHHhC
Confidence 0 024689999999 89999999999999887
|
|
| >PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.88 E-value=5.2e-22 Score=206.01 Aligned_cols=181 Identities=18% Similarity=0.095 Sum_probs=133.0
Q ss_pred cccEEEEcCccCChh-hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHH
Q psy5825 304 HIHVIIHAAASLRFD-ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHV 380 (596)
Q Consensus 304 ~vd~ViH~AA~v~~~-~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~ 380 (596)
++|+||||||..... .....++++|+.||.+||++|.. .++ +|||+||++|||... .++|...
T Consensus 68 ~~d~Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~-~~~-~~i~~SS~~vyg~~~~~~~~E~~~------------ 133 (308)
T PRK11150 68 DIEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLE-REI-PFLYASSAATYGGRTDDFIEEREY------------ 133 (308)
T ss_pred CccEEEECceecCCcCCChHHHHHHHHHHHHHHHHHHHH-cCC-cEEEEcchHHhCcCCCCCCccCCC------------
Confidence 689999999865422 13345789999999999999998 455 699999999998632 1222110
Q ss_pred HhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcH-HHHHH
Q psy5825 381 MQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPG-GAAAG 457 (596)
Q Consensus 381 ~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~-~l~~~ 457 (596)
.. ..+.|+.||+++|++++.++ .+++++|+||++|||++..+. +. ..... .++..
T Consensus 134 -----------------~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~~~~-~~---~~~~~~~~~~~ 191 (308)
T PRK11150 134 -----------------EK-PLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPREGHK-GS---MASVAFHLNNQ 191 (308)
T ss_pred -----------------CC-CCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCCCCC-Cc---cchhHHHHHHH
Confidence 00 23679999999999999987 799999999999999865321 11 11111 22234
Q ss_pred HHhccceEe-ecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHH
Q psy5825 458 AALGLIHTF-YAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNS 536 (596)
Q Consensus 458 ~~~g~~~~~-~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~ 536 (596)
+..|....+ .+++...++||||||+|++++.++... .+++|||+++ .++++.||++.
T Consensus 192 ~~~~~~~~i~~g~~~~~r~~i~v~D~a~a~~~~~~~~--------------------~~~~yni~~~--~~~s~~el~~~ 249 (308)
T PRK11150 192 LNNGENPKLFEGSENFKRDFVYVGDVAAVNLWFWENG--------------------VSGIFNCGTG--RAESFQAVADA 249 (308)
T ss_pred HhcCCCCEEecCCCceeeeeeeHHHHHHHHHHHHhcC--------------------CCCeEEcCCC--CceeHHHHHHH
Confidence 455543333 356677899999999999998887531 2459999999 88999999999
Q ss_pred HHHHcc
Q psy5825 537 VQAAGK 542 (596)
Q Consensus 537 l~~~~~ 542 (596)
|.+.++
T Consensus 250 i~~~~~ 255 (308)
T PRK11150 250 VLAYHK 255 (308)
T ss_pred HHHHhC
Confidence 999876
|
|
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.3e-21 Score=201.49 Aligned_cols=204 Identities=12% Similarity=0.175 Sum_probs=147.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.||++++.. +..+++++|+||||||..... .....++.+|+.|+.+|+++|....++++|||+||
T Consensus 56 ~~~~~~~~D~~d~~~------~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~~~~~~iv~~SS 129 (325)
T PLN02989 56 ERLKLFKADLLDEGS------FELAIDGCETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKVSSVKRVILTSS 129 (325)
T ss_pred CceEEEeCCCCCchH------HHHHHcCCCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHcCCceEEEEecc
Confidence 468999999997754 788888999999999975432 23456889999999999999987445789999999
Q ss_pred cccccCCc-------cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 354 LYTHSYRE-------DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 354 ~~v~g~~~-------~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
+++|+... .++|+... . |..... ..+.|+.||+++|++++.+. .|++
T Consensus 130 ~~~~~~~~~~~~~~~~~~E~~~~---~--------------------p~~~~~-~~~~Y~~sK~~~E~~~~~~~~~~~~~ 185 (325)
T PLN02989 130 MAAVLAPETKLGPNDVVDETFFT---N--------------------PSFAEE-RKQWYVLSKTLAEDAAWRFAKDNEID 185 (325)
T ss_pred hhheecCCccCCCCCccCcCCCC---c--------------------hhHhcc-cccchHHHHHHHHHHHHHHHHHcCCe
Confidence 98875421 12232110 0 000000 12579999999999999887 6999
Q ss_pred EEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCC
Q psy5825 425 LAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPA 504 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~ 504 (596)
++|+||++|||+...+.. .....++..+..|... .+ ...++||||+|+|++++.++....
T Consensus 186 ~~ilR~~~vyGp~~~~~~------~~~~~~i~~~~~~~~~--~~--~~~r~~i~v~Dva~a~~~~l~~~~---------- 245 (325)
T PLN02989 186 LIVLNPGLVTGPILQPTL------NFSVAVIVELMKGKNP--FN--TTHHRFVDVRDVALAHVKALETPS---------- 245 (325)
T ss_pred EEEEcCCceeCCCCCCCC------CchHHHHHHHHcCCCC--CC--CcCcCeeEHHHHHHHHHHHhcCcc----------
Confidence 999999999998754321 1223445555444322 12 345799999999999999876532
Q ss_pred CcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 505 SLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 505 ~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++ + ..+++.+|++.|.+.++
T Consensus 246 ---------~~~~~ni~-~--~~~s~~ei~~~i~~~~~ 271 (325)
T PLN02989 246 ---------ANGRYIID-G--PVVTIKDIENVLREFFP 271 (325)
T ss_pred ---------cCceEEEe-c--CCCCHHHHHHHHHHHCC
Confidence 24589995 4 57999999999999887
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.6e-21 Score=203.54 Aligned_cols=207 Identities=14% Similarity=0.142 Sum_probs=142.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhh--hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDE--LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTL 354 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~--~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~ 354 (596)
.++.++.|||+++.. +..++.++|+||||||.+.... +...++++|+.||.+||++|.....+++|||+||+
T Consensus 56 ~~~~~v~~Dl~d~~~------~~~~~~~~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~r~v~~SS~ 129 (351)
T PLN02650 56 TRLTLWKADLAVEGS------FDDAIRGCTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKAKTVRRIVFTSSA 129 (351)
T ss_pred CceEEEEecCCChhh------HHHHHhCCCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhcCCceEEEEecch
Confidence 368899999998764 7888889999999999765332 23467899999999999999984347899999999
Q ss_pred ccccCCc---c-ccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEe
Q psy5825 355 YTHSYRE---D-IQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMV 428 (596)
Q Consensus 355 ~v~g~~~---~-i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~Il 428 (596)
++|+... . ++|+... ...... + ... ..+.|+.||+++|.+++.++ +|++++|+
T Consensus 130 ~~~~~~~~~~~~~~E~~~~---------------~~~~~~---~--~~~-~~~~Y~~sK~~~E~~~~~~~~~~gi~~~il 188 (351)
T PLN02650 130 GTVNVEEHQKPVYDEDCWS---------------DLDFCR---R--KKM-TGWMYFVSKTLAEKAAWKYAAENGLDFISI 188 (351)
T ss_pred hhcccCCCCCCccCcccCC---------------chhhhh---c--ccc-ccchHHHHHHHHHHHHHHHHHHcCCeEEEE
Confidence 8876421 1 2222100 000000 0 000 12579999999999999987 79999999
Q ss_pred cCCccccCCCCCccccCCCCCCcHHHHHHH--HhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q psy5825 429 RPSIVVSTWKEPIVGWSNNLYGPGGAAAGA--ALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASL 506 (596)
Q Consensus 429 Rp~~V~G~~~~p~~G~~~~~~~~~~l~~~~--~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~ 506 (596)
||++|||+...+. .+..++..+ ..|... .++ ....+|||||+|||++++.++....
T Consensus 189 Rp~~v~Gp~~~~~--------~~~~~~~~~~~~~~~~~-~~~-~~~~r~~v~V~Dva~a~~~~l~~~~------------ 246 (351)
T PLN02650 189 IPTLVVGPFISTS--------MPPSLITALSLITGNEA-HYS-IIKQGQFVHLDDLCNAHIFLFEHPA------------ 246 (351)
T ss_pred CCCceECCCCCCC--------CCccHHHHHHHhcCCcc-ccC-cCCCcceeeHHHHHHHHHHHhcCcC------------
Confidence 9999999865321 111222221 222211 122 1234799999999999999886532
Q ss_pred CCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 507 VAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 507 ~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++|+ +++ ..+++.+++++|.+.++
T Consensus 247 -------~~~~~i-~~~--~~~s~~el~~~i~~~~~ 272 (351)
T PLN02650 247 -------AEGRYI-CSS--HDATIHDLAKMLREKYP 272 (351)
T ss_pred -------cCceEE-ecC--CCcCHHHHHHHHHHhCc
Confidence 234785 555 67999999999998775
|
|
| >PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase | Back alignment and domain information |
|---|
Probab=99.88 E-value=3.9e-21 Score=198.85 Aligned_cols=203 Identities=16% Similarity=0.103 Sum_probs=143.4
Q ss_pred EeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCCh----hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 283 SGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRF----DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 283 ~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~----~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.|||++. ..+..+++ ++|+||||||..+. ......++.+|+.||.+|+++|.. .++++|||+||++|
T Consensus 32 ~~Dl~~~------~~l~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~-~~~~~~i~~SS~~v 104 (306)
T PLN02725 32 ELDLTRQ------ADVEAFFAKEKPTYVILAAAKVGGIHANMTYPADFIRENLQIQTNVIDAAYR-HGVKKLLFLGSSCI 104 (306)
T ss_pred cCCCCCH------HHHHHHHhccCCCEEEEeeeeecccchhhhCcHHHHHHHhHHHHHHHHHHHH-cCCCeEEEeCceee
Confidence 5677654 34777766 47999999998542 123456889999999999999998 57899999999999
Q ss_pred ccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCc-hHHHHHHHHHHHHHHHh--cCCCEEEecCC
Q psy5825 357 HSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNN-SYSFTKAIGESVVEKYL--YKLPLAMVRPS 431 (596)
Q Consensus 357 ~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~-~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~ 431 (596)
||... .++|+ .... .+. . ..+ .|+.||+++|++++.+. .+++++++||+
T Consensus 105 yg~~~~~~~~E~---------------------~~~~-~~~---~-p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~ 158 (306)
T PLN02725 105 YPKFAPQPIPET---------------------ALLT-GPP---E-PTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPT 158 (306)
T ss_pred cCCCCCCCCCHH---------------------Hhcc-CCC---C-CCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEec
Confidence 98532 22221 1100 010 0 113 49999999999998877 79999999999
Q ss_pred ccccCCCCCccccCCCCCCcHHHHHHH----HhccceEe-ecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q psy5825 432 IVVSTWKEPIVGWSNNLYGPGGAAAGA----ALGLIHTF-YAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASL 506 (596)
Q Consensus 432 ~V~G~~~~p~~G~~~~~~~~~~l~~~~----~~g~~~~~-~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~ 506 (596)
+|||+.... .+ ........++..+ ..|....+ ++++...++||||+|||++++.++....
T Consensus 159 ~vyG~~~~~-~~--~~~~~~~~~i~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dv~~~~~~~~~~~~------------ 223 (306)
T PLN02725 159 NLYGPHDNF-HP--ENSHVIPALIRRFHEAKANGAPEVVVWGSGSPLREFLHVDDLADAVVFLMRRYS------------ 223 (306)
T ss_pred ceeCCCCCC-CC--CCCcccHHHHHHHHHHhhcCCCeEEEcCCCCeeeccccHHHHHHHHHHHHhccc------------
Confidence 999986321 11 0001122333222 23332233 6778888999999999999998886421
Q ss_pred CCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 507 VAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 507 ~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.++.||++++ ..+++.+|++.+.+.++
T Consensus 224 -------~~~~~ni~~~--~~~s~~e~~~~i~~~~~ 250 (306)
T PLN02725 224 -------GAEHVNVGSG--DEVTIKELAELVKEVVG 250 (306)
T ss_pred -------cCcceEeCCC--CcccHHHHHHHHHHHhC
Confidence 2457899998 89999999999999887
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5e-21 Score=198.73 Aligned_cols=199 Identities=15% Similarity=0.129 Sum_probs=142.8
Q ss_pred EEEeccCCCCCCCCHHHHHHHh----ccccEEEEcCccCChh-hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 281 IISGDISQPSLGISSHDQQFIQ----HHIHVIIHAAASLRFD-ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 281 ~v~GDl~~~~lGL~~~~~~~l~----~~vd~ViH~AA~v~~~-~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
++.+|+.+..+ +..+. .++|+||||||..+.. .+...++.+|+.||.+|+++|.+ .++ +|||+||++
T Consensus 45 ~~~~d~~~~~~------~~~~~~~~~~~~D~vvh~A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~-~~~-~~v~~SS~~ 116 (314)
T TIGR02197 45 VIADYIDKEDF------LDRLEKGAFGKIEAIFHQGACSDTTETDGEYMMENNYQYSKRLLDWCAE-KGI-PFIYASSAA 116 (314)
T ss_pred eeeccCcchhH------HHHHHhhccCCCCEEEECccccCccccchHHHHHHHHHHHHHHHHHHHH-hCC-cEEEEccHH
Confidence 45677776544 55554 4799999999976433 23455789999999999999998 455 799999999
Q ss_pred cccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----cCCCEEEecC
Q psy5825 356 THSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----YKLPLAMVRP 430 (596)
Q Consensus 356 v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----~gl~~~IlRp 430 (596)
|||... .+.|+. +. .. ..+.|+.||+++|.+++.+. .+++++|+||
T Consensus 117 vy~~~~~~~~e~~--------------------------~~--~~-p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~ 167 (314)
T TIGR02197 117 TYGDGEAGFREGR--------------------------EL--ER-PLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRY 167 (314)
T ss_pred hcCCCCCCccccc--------------------------Cc--CC-CCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEE
Confidence 998532 111110 00 01 23679999999999998753 4679999999
Q ss_pred CccccCCCCCccccCCCCCC-cHHHHHHHHhccceEee------cCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCC
Q psy5825 431 SIVVSTWKEPIVGWSNNLYG-PGGAAAGAALGLIHTFY------AKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPP 503 (596)
Q Consensus 431 ~~V~G~~~~p~~G~~~~~~~-~~~l~~~~~~g~~~~~~------~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~ 503 (596)
++|||+..... + .+.. ...++..+..+....++ +++.+.++||||||+|++++.++.. .
T Consensus 168 ~~vyG~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~D~a~~i~~~~~~-~--------- 233 (314)
T TIGR02197 168 FNVYGPREYHK-G---KMASVAFHLFNQIKAGGNVKLFKSSEGFKDGEQLRDFVYVKDVVDVNLWLLEN-G--------- 233 (314)
T ss_pred eeccCCCCCCC-C---CcccHHHHHHHHHhcCCCeEEecCccccCCCCceeeeEEHHHHHHHHHHHHhc-c---------
Confidence 99999864321 1 1111 12334444444433332 4567789999999999999998865 1
Q ss_pred CCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 504 ASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 504 ~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++++.||++.|.+.++
T Consensus 234 ----------~~~~yni~~~--~~~s~~e~~~~i~~~~g 260 (314)
T TIGR02197 234 ----------VSGIFNLGTG--RARSFNDLADAVFKALG 260 (314)
T ss_pred ----------cCceEEcCCC--CCccHHHHHHHHHHHhC
Confidence 2569999999 89999999999999887
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=6.4e-21 Score=197.20 Aligned_cols=223 Identities=21% Similarity=0.103 Sum_probs=148.3
Q ss_pred EEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD 318 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~ 318 (596)
+||.+.+|.-+..-+..++..+ + +. .+..+..++.|||+++. .+..++. ++|+||||||.+...
T Consensus 3 iLVtG~~GfiGs~l~~~L~~~g--~-V~-----~~~~~~~~~~~Dl~d~~------~~~~~~~~~~~D~Vih~Aa~~~~~ 68 (299)
T PRK09987 3 ILLFGKTGQVGWELQRALAPLG--N-LI-----ALDVHSTDYCGDFSNPE------GVAETVRKIRPDVIVNAAAHTAVD 68 (299)
T ss_pred EEEECCCCHHHHHHHHHhhccC--C-EE-----EeccccccccCCCCCHH------HHHHHHHhcCCCEEEECCccCCcc
Confidence 6888887777765544444321 0 00 00011223457887543 4777776 489999999987643
Q ss_pred h---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhh
Q psy5825 319 E---LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILS 393 (596)
Q Consensus 319 ~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 393 (596)
. .....+.+|+.||.+|+++|... ++ +|||+||.+|||... .+.|+..+
T Consensus 69 ~~~~~~~~~~~~N~~~~~~l~~aa~~~-g~-~~v~~Ss~~Vy~~~~~~p~~E~~~~------------------------ 122 (299)
T PRK09987 69 KAESEPEFAQLLNATSVEAIAKAANEV-GA-WVVHYSTDYVFPGTGDIPWQETDAT------------------------ 122 (299)
T ss_pred hhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEccceEECCCCCCCcCCCCCC------------------------
Confidence 2 34557789999999999999984 54 799999999998643 23332110
Q ss_pred hhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecC--CC
Q psy5825 394 SMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAK--HD 471 (596)
Q Consensus 394 p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~--~~ 471 (596)
. ..+.|+.||+.+|+++..++ .+++|+|+++|||+... .....++..+..|....++++ +.
T Consensus 123 -----~-P~~~Yg~sK~~~E~~~~~~~--~~~~ilR~~~vyGp~~~---------~~~~~~~~~~~~~~~~~v~~d~~g~ 185 (299)
T PRK09987 123 -----A-PLNVYGETKLAGEKALQEHC--AKHLIFRTSWVYAGKGN---------NFAKTMLRLAKEREELSVINDQFGA 185 (299)
T ss_pred -----C-CCCHHHHHHHHHHHHHHHhC--CCEEEEecceecCCCCC---------CHHHHHHHHHhcCCCeEEeCCCcCC
Confidence 0 23679999999999998764 46799999999997431 112333433444444445555 44
Q ss_pred CccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHc
Q psy5825 472 KKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAG 541 (596)
Q Consensus 472 ~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~ 541 (596)
...+++.+|+++.+++.++... ..+++||++++ ..+||.||+..|.+.+
T Consensus 186 ~~~~~~~~d~~~~~~~~~~~~~-------------------~~~giyni~~~--~~~s~~e~~~~i~~~~ 234 (299)
T PRK09987 186 PTGAELLADCTAHAIRVALNKP-------------------EVAGLYHLVAS--GTTTWHDYAALVFEEA 234 (299)
T ss_pred CCCHHHHHHHHHHHHHHhhccC-------------------CCCCeEEeeCC--CCccHHHHHHHHHHHH
Confidence 4445566788888877665332 12469999999 8899999999997753
|
|
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.2e-21 Score=201.42 Aligned_cols=199 Identities=14% Similarity=0.059 Sum_probs=147.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCc-----
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLK----- 346 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vk----- 346 (596)
.++.++.+||++.. .+..++.. +|+||||||..... ......+.+|+.||.+|+++|..+ ++.
T Consensus 60 ~~~~~~~~Dl~d~~------~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~-~~~~~~~~ 132 (340)
T PLN02653 60 ARMKLHYGDLSDAS------SLRRWLDDIKPDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLH-GQETGRQI 132 (340)
T ss_pred CceEEEEecCCCHH------HHHHHHHHcCCCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHh-ccccccce
Confidence 35889999999654 36666664 69999999986533 223456789999999999999874 443
Q ss_pred eEEEecCcccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCC
Q psy5825 347 AILHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKL 423 (596)
Q Consensus 347 rfV~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl 423 (596)
+|||+||.+|||... .+.|+. +. . ..+.|+.||+++|+++..++ .++
T Consensus 133 ~~v~~Ss~~vyg~~~~~~~E~~--------------------------~~---~-p~~~Y~~sK~~~e~~~~~~~~~~~~ 182 (340)
T PLN02653 133 KYYQAGSSEMYGSTPPPQSETT--------------------------PF---H-PRSPYAVAKVAAHWYTVNYREAYGL 182 (340)
T ss_pred eEEEeccHHHhCCCCCCCCCCC--------------------------CC---C-CCChhHHHHHHHHHHHHHHHHHcCC
Confidence 899999999999643 222211 00 0 23679999999999999887 788
Q ss_pred CEEEecCCccccCCCCCccccCCCCCCcHHHH----HHHHhcc-ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 424 PLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAA----AGAALGL-IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 424 ~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~----~~~~~g~-~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
++++.|+.++||+... .++ ...++ ..+..|. +..+.|++.+.+|||||+|+|++++.++...
T Consensus 183 ~~~~~~~~~~~gp~~~------~~~--~~~~~~~~~~~~~~~~~~~~~~g~g~~~rd~i~v~D~a~a~~~~~~~~----- 249 (340)
T PLN02653 183 FACNGILFNHESPRRG------ENF--VTRKITRAVGRIKVGLQKKLFLGNLDASRDWGFAGDYVEAMWLMLQQE----- 249 (340)
T ss_pred eEEEeeeccccCCCCC------ccc--chhHHHHHHHHHHcCCCCceEeCCCcceecceeHHHHHHHHHHHHhcC-----
Confidence 9999999999997431 111 12222 2233443 2334588899999999999999999988642
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++|||+++ +++++.+|++.+.+.++
T Consensus 250 ---------------~~~~yni~~g--~~~s~~e~~~~i~~~~g 276 (340)
T PLN02653 250 ---------------KPDDYVVATE--ESHTVEEFLEEAFGYVG 276 (340)
T ss_pred ---------------CCCcEEecCC--CceeHHHHHHHHHHHcC
Confidence 2468999999 89999999999999887
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=99.87 E-value=5.3e-21 Score=199.59 Aligned_cols=199 Identities=19% Similarity=0.233 Sum_probs=147.2
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh-hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF-DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+.++.+|++++. .+..++.++|+|||+|+.... ...+..++.+|+.|+.+|+++|.. .++++|||+||.++
T Consensus 44 ~~~~~~~D~~~~~------~l~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS~~~ 116 (328)
T TIGR03466 44 DVEIVEGDLRDPA------SLRKAVAGCRALFHVAADYRLWAPDPEEMYAANVEGTRNLLRAALE-AGVERVVYTSSVAT 116 (328)
T ss_pred CceEEEeeCCCHH------HHHHHHhCCCEEEEeceecccCCCCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEechhh
Confidence 5889999998654 488888999999999987643 334567889999999999999998 57899999999999
Q ss_pred ccCCc---cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCC
Q psy5825 357 HSYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPS 431 (596)
Q Consensus 357 ~g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~ 431 (596)
||... .++|+. +..... ..+.|+.+|+++|++++.+. .+++++|+||+
T Consensus 117 ~~~~~~~~~~~e~~--------------------------~~~~~~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~ 169 (328)
T TIGR03466 117 LGVRGDGTPADETT--------------------------PSSLDD-MIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPS 169 (328)
T ss_pred cCcCCCCCCcCccC--------------------------CCCccc-ccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCC
Confidence 98521 222211 000000 23579999999999999987 69999999999
Q ss_pred ccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCC
Q psy5825 432 IVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIP 511 (596)
Q Consensus 432 ~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~ 511 (596)
++||+.... ......++..+..+..+.+. +...+||||+|+|++++.++...
T Consensus 170 ~~~G~~~~~-------~~~~~~~~~~~~~~~~~~~~---~~~~~~i~v~D~a~a~~~~~~~~------------------ 221 (328)
T TIGR03466 170 TPIGPRDIK-------PTPTGRIIVDFLNGKMPAYV---DTGLNLVHVDDVAEGHLLALERG------------------ 221 (328)
T ss_pred ccCCCCCCC-------CCcHHHHHHHHHcCCCceee---CCCcceEEHHHHHHHHHHHHhCC------------------
Confidence 999985421 01112344444444333222 34468999999999999888652
Q ss_pred CCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 512 RTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 512 ~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+.+||++ + .++++.||++.+.+.++
T Consensus 222 -~~~~~~~~~-~--~~~s~~e~~~~i~~~~g 248 (328)
T TIGR03466 222 -RIGERYILG-G--ENLTLKQILDKLAEITG 248 (328)
T ss_pred -CCCceEEec-C--CCcCHHHHHHHHHHHhC
Confidence 246789886 4 67999999999999887
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.5e-20 Score=198.68 Aligned_cols=209 Identities=17% Similarity=0.107 Sum_probs=148.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.+||+++. ++..++.. +|+||||||..... ......+.+|+.|+.+|+++|.....+++|||+
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~~~~~~iv~~ 125 (349)
T TIGR02622 52 KKIEDHFGDIRDAA------KLRKAIAEFKPEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAIGSVKAVVNV 125 (349)
T ss_pred CCceEEEccCCCHH------HHHHHHhhcCCCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhcCCCCEEEEE
Confidence 46788999999654 47777764 69999999965432 234467899999999999999874337899999
Q ss_pred cCcccccCCc---cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--c-----
Q psy5825 352 STLYTHSYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--Y----- 421 (596)
Q Consensus 352 SS~~v~g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~----- 421 (596)
||+.+||... .+.|+. +. . ..+.|+.||.++|.+++.++ .
T Consensus 126 SS~~vyg~~~~~~~~~e~~--------------------------~~---~-p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 175 (349)
T TIGR02622 126 TSDKCYRNDEWVWGYRETD--------------------------PL---G-GHDPYSSSKACAELVIASYRSSFFGVAN 175 (349)
T ss_pred echhhhCCCCCCCCCccCC--------------------------CC---C-CCCcchhHHHHHHHHHHHHHHHhhcccc
Confidence 9999998532 111110 00 0 23579999999999998765 2
Q ss_pred --CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCC
Q psy5825 422 --KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGH 499 (596)
Q Consensus 422 --gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~ 499 (596)
+++++++||++|||+... ... .....++..+..|.... .+++.+.+|||||||+|++++.++.......
T Consensus 176 ~~~i~~~~lR~~~vyGp~~~-----~~~-~~~~~~~~~~~~g~~~~-~~~g~~~rd~i~v~D~a~a~~~~~~~~~~~~-- 246 (349)
T TIGR02622 176 FHGIKIASARAGNVIGGGDW-----AED-RLIPDVIRAFSSNKIVI-IRNPDATRPWQHVLEPLSGYLLLAEKLFTGQ-- 246 (349)
T ss_pred cCCCcEEEEccCcccCCCcc-----hhh-hhhHHHHHHHhcCCCeE-ECCCCcccceeeHHHHHHHHHHHHHHHhhcC--
Confidence 899999999999997531 110 11234445555554433 4567899999999999999998876432100
Q ss_pred CCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 500 VAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 500 ~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
...+++|||+++...++++.+++..+...++
T Consensus 247 ------------~~~~~~yni~s~~~~~~s~~~~~~~i~~~~~ 277 (349)
T TIGR02622 247 ------------AEFAGAWNFGPRASDNARVVELVVDALEFWW 277 (349)
T ss_pred ------------ccccceeeeCCCcccCcCHHHHHHHHHHHhc
Confidence 0125799999752268999999998887654
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=99.87 E-value=1.8e-20 Score=197.00 Aligned_cols=212 Identities=18% Similarity=0.156 Sum_probs=149.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.+|++++. .+..++. ++|+|||+||..... .....++.+|+.|+.+|+++|.. .++++|||+
T Consensus 50 ~~~~~~~~Dl~d~~------~~~~~~~~~~~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~ 122 (338)
T PRK10675 50 KHPTFVEGDIRNEA------LLTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRA-ANVKNLIFS 122 (338)
T ss_pred CCceEEEccCCCHH------HHHHHHhcCCCCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEe
Confidence 35778899999754 3666665 589999999976532 23346889999999999999998 578999999
Q ss_pred cCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---cCCCEE
Q psy5825 352 STLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---YKLPLA 426 (596)
Q Consensus 352 SS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---~gl~~~ 426 (596)
||+++||... .++|+. + .+. ..+.|+.+|+++|++++.++ .+++++
T Consensus 123 Ss~~~yg~~~~~~~~E~~--------------------------~--~~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ 173 (338)
T PRK10675 123 SSATVYGDQPKIPYVESF--------------------------P--TGT-PQSPYGKSKLMVEQILTDLQKAQPDWSIA 173 (338)
T ss_pred ccHHhhCCCCCCcccccc--------------------------C--CCC-CCChhHHHHHHHHHHHHHHHHhcCCCcEE
Confidence 9999998532 222211 0 001 23579999999999999876 479999
Q ss_pred EecCCccccCCCCCccccCCCC--CCcHHHHHHHHhccc--eEeec------CCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNNL--YGPGGAAAGAALGLI--HTFYA------KHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~~--~~~~~l~~~~~~g~~--~~~~~------~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
|+|+++|||+......|-.+.. .....++..+..+.. ..+++ ++.+.++||||+|+|++++.++......
T Consensus 174 ilR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~v~D~a~~~~~~~~~~~~~ 253 (338)
T PRK10675 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVAAMEKLANK 253 (338)
T ss_pred EEEeeeecCCCcccccccCCCCChhHHHHHHHHHHhcCCCceEEeCCcCCCCCCcEEEeeEEHHHHHHHHHHHHHhhhcc
Confidence 9999999998643222211100 111233333333321 12222 4667899999999999999988642110
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||+++ +++++.||++.+.+.++
T Consensus 254 ----------------~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 281 (338)
T PRK10675 254 ----------------PGVHIYNLGAG--VGSSVLDVVNAFSKACG 281 (338)
T ss_pred ----------------CCCceEEecCC--CceeHHHHHHHHHHHhC
Confidence 23579999998 89999999999999887
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=99.86 E-value=5.8e-21 Score=189.60 Aligned_cols=185 Identities=21% Similarity=0.232 Sum_probs=143.8
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccc--cEEEEcCccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEec
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHI--HVIIHAAASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVS 352 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~v--d~ViH~AA~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vS 352 (596)
++.++.+|+.+. ..+..++... |+|||+||.... ......++..|+.++.+||++|.. .++.+|||+|
T Consensus 43 ~~~~~~~dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~-~~~~~~i~~s 115 (236)
T PF01370_consen 43 NVEFVIGDLTDK------EQLEKLLEKANIDVVIHLAAFSSNPESFEDPEEIIEANVQGTRNLLEAARE-AGVKRFIFLS 115 (236)
T ss_dssp TEEEEESETTSH------HHHHHHHHHHTESEEEEEBSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHH-HTTSEEEEEE
T ss_pred eEEEEEeecccc------ccccccccccCceEEEEeecccccccccccccccccccccccccccccccc-cccccccccc
Confidence 789999999954 4588888876 999999998642 234566889999999999999998 4679999999
Q ss_pred CcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEe
Q psy5825 353 TLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMV 428 (596)
Q Consensus 353 S~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~Il 428 (596)
|..+|+... .+.|+... . ..+.|+.+|+.+|++++.+. .+++++|+
T Consensus 116 S~~~y~~~~~~~~~e~~~~-----------------------------~-~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~ 165 (236)
T PF01370_consen 116 SASVYGDPDGEPIDEDSPI-----------------------------N-PLSPYGASKRAAEELLRDYAKKYGLRVTIL 165 (236)
T ss_dssp EGGGGTSSSSSSBETTSGC-----------------------------C-HSSHHHHHHHHHHHHHHHHHHHHTSEEEEE
T ss_pred ccccccccccccccccccc-----------------------------c-cccccccccccccccccccccccccccccc
Confidence 999999752 23332110 0 23569999999999999988 69999999
Q ss_pred cCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 429 RPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 429 Rp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
||++|||+. .+. +. .......++..+..|....+++++...++||||+|+|++++.++.+...
T Consensus 166 R~~~vyG~~-~~~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~D~a~~~~~~~~~~~~------------- 228 (236)
T PF01370_consen 166 RPPNVYGPG-NPN-NN--SSSFLPSLIRQALKGKPIKIPGDGSQVRDFIHVDDLAEAIVAALENPKA------------- 228 (236)
T ss_dssp EESEEESTT-SSS-SS--TSSHHHHHHHHHHTTSSEEEESTSSCEEEEEEHHHHHHHHHHHHHHSCT-------------
T ss_pred ccccccccc-ccc-cc--cccccchhhHHhhcCCcccccCCCCCccceEEHHHHHHHHHHHHhCCCC-------------
Confidence 999999987 111 11 1122345666666777567788999999999999999999999987541
Q ss_pred CCCCCCCCeEEcc
Q psy5825 509 PIPRTDPPVYNLS 521 (596)
Q Consensus 509 ~~~~~~~~vyni~ 521 (596)
.+++|||+
T Consensus 229 -----~~~~yNig 236 (236)
T PF01370_consen 229 -----AGGIYNIG 236 (236)
T ss_dssp -----TTEEEEES
T ss_pred -----CCCEEEeC
Confidence 47899986
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=99.85 E-value=1e-19 Score=190.35 Aligned_cols=184 Identities=14% Similarity=0.103 Sum_probs=137.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.||++++. .+..++.++|+|||+||.... ..+...++++|+.|+.+|+++|.. .++.+|||+||
T Consensus 53 ~~~~~v~~Dl~d~~------~l~~~~~~iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~-~~~~~iV~~SS 125 (324)
T TIGR03589 53 PCLRFFIGDVRDKE------RLTRALRGVDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAID-NGVKRVVALST 125 (324)
T ss_pred CcEEEEEccCCCHH------HHHHHHhcCCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEeC
Confidence 46889999999754 478888899999999997542 223456889999999999999998 57889999999
Q ss_pred cccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEe
Q psy5825 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMV 428 (596)
Q Consensus 354 ~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~Il 428 (596)
...+. ..+.|+.||+++|+++..+. .|++++++
T Consensus 126 ~~~~~------------------------------------------p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~l 163 (324)
T TIGR03589 126 DKAAN------------------------------------------PINLYGATKLASDKLFVAANNISGSKGTRFSVV 163 (324)
T ss_pred CCCCC------------------------------------------CCCHHHHHHHHHHHHHHHHHhhccccCcEEEEE
Confidence 64321 12469999999999997642 68999999
Q ss_pred cCCccccCCCCCccccCCCCCCcHHHHHH-HHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcC
Q psy5825 429 RPSIVVSTWKEPIVGWSNNLYGPGGAAAG-AALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLV 507 (596)
Q Consensus 429 Rp~~V~G~~~~p~~G~~~~~~~~~~l~~~-~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~ 507 (596)
|||+|||+.. ....++.. +..|......+++...++||||+|+|++++.++...
T Consensus 164 R~g~v~G~~~-----------~~i~~~~~~~~~~~~~~~i~~~~~~r~~i~v~D~a~a~~~al~~~-------------- 218 (324)
T TIGR03589 164 RYGNVVGSRG-----------SVVPFFKSLKEEGVTELPITDPRMTRFWITLEQGVNFVLKSLERM-------------- 218 (324)
T ss_pred eecceeCCCC-----------CcHHHHHHHHHhCCCCeeeCCCCceEeeEEHHHHHHHHHHHHhhC--------------
Confidence 9999999732 12233333 333431122235677889999999999999998642
Q ss_pred CCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 508 APIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 508 ~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+.+|+ +.+ ..+++.++++.+...+.
T Consensus 219 -----~~~~~~~-~~~--~~~sv~el~~~i~~~~~ 245 (324)
T TIGR03589 219 -----LGGEIFV-PKI--PSMKITDLAEAMAPECP 245 (324)
T ss_pred -----CCCCEEc-cCC--CcEEHHHHHHHHHhhCC
Confidence 1356885 555 56899999999988654
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=99.85 E-value=5.7e-20 Score=194.59 Aligned_cols=211 Identities=15% Similarity=0.169 Sum_probs=141.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhh-----hHH-----HHHHHHHHHHHHHHHHHHhcCCCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDE-----LIQ-----DAFTLNIQATRELLDLATRCSQLK 346 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~-----~~~-----~~~~~NV~GT~~LL~~a~~~~~vk 346 (596)
.++.++.+||+++. .+..++.++|+|||+||.++... ++. .++.+|+.||.+||++|....+++
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~~~~~ 131 (353)
T PLN02896 58 DRLRLFRADLQEEG------SFDEAVKGCDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKSKTVK 131 (353)
T ss_pred CeEEEEECCCCCHH------HHHHHHcCCCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhcCCcc
Confidence 46889999999754 47788889999999999865331 222 244566799999999998744588
Q ss_pred eEEEecCcccccCCc-------cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 347 AILHVSTLYTHSYRE-------DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 347 rfV~vSS~~v~g~~~-------~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
+|||+||++|||... .++|+. +. .++...+. .. ..+.|+.||+++|++++.+
T Consensus 132 ~~v~~SS~~vyg~~~~~~~~~~~~~E~~-~~-----------------p~~~~~~~--~~-~~~~Y~~sK~~~E~~~~~~ 190 (353)
T PLN02896 132 RVVFTSSISTLTAKDSNGRWRAVVDETC-QT-----------------PIDHVWNT--KA-SGWVYVLSKLLTEEAAFKY 190 (353)
T ss_pred EEEEEechhhccccccCCCCCCccCccc-CC-----------------cHHHhhcc--CC-CCccHHHHHHHHHHHHHHH
Confidence 999999999998421 122210 00 01000000 00 2246999999999999998
Q ss_pred h--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEee--cC---CCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFY--AK---HDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~--~~---~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|++++|+||++|||+...+. +......+...+.|....++ +. ....+|||||+|+|++++.++..
T Consensus 191 ~~~~~~~~~~lR~~~vyGp~~~~~------~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~dfi~v~Dva~a~~~~l~~ 264 (353)
T PLN02896 191 AKENGIDLVSVITTTVAGPFLTPS------VPSSIQVLLSPITGDSKLFSILSAVNSRMGSIALVHIEDICDAHIFLMEQ 264 (353)
T ss_pred HHHcCCeEEEEcCCcccCCCcCCC------CCchHHHHHHHhcCCccccccccccccccCceeEEeHHHHHHHHHHHHhC
Confidence 7 799999999999999865321 11112222222233221111 11 11246999999999999999864
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.. .+.+||+ ++ .++++.+|++.+.+.++
T Consensus 265 ~~-------------------~~~~~~~-~~--~~~s~~el~~~i~~~~~ 292 (353)
T PLN02896 265 TK-------------------AEGRYIC-CV--DSYDMSELINHLSKEYP 292 (353)
T ss_pred CC-------------------cCccEEe-cC--CCCCHHHHHHHHHHhCC
Confidence 21 2347865 45 67999999999999876
|
|
| >KOG1429|consensus | Back alignment and domain information |
|---|
Probab=99.84 E-value=2.8e-20 Score=180.89 Aligned_cols=241 Identities=17% Similarity=0.118 Sum_probs=169.5
Q ss_pred EEEEeCCCCcccHHHHHHHHhhhh--------hHHHhhhhhhhh-hcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEE
Q psy5825 239 IYILLRSKKNKTVQERLAEQFKDE--------LFDRLKNEQADI-LQRKVHIISGDISQPSLGISSHDQQFIQHHIHVII 309 (596)
Q Consensus 239 V~~LvR~~~~~~~~~Rl~~~~~~~--------~~~~l~~~~~~~-~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~Vi 309 (596)
.-+++.+..|.-+......++... .|+........+ -..+++.+.-|+. ..++..||.||
T Consensus 28 lrI~itGgaGFIgSHLvdkLm~egh~VIa~Dn~ftg~k~n~~~~~~~~~fel~~hdv~-----------~pl~~evD~Iy 96 (350)
T KOG1429|consen 28 LRILITGGAGFIGSHLVDKLMTEGHEVIALDNYFTGRKENLEHWIGHPNFELIRHDVV-----------EPLLKEVDQIY 96 (350)
T ss_pred cEEEEecCcchHHHHHHHHHHhcCCeEEEEecccccchhhcchhccCcceeEEEeech-----------hHHHHHhhhhh
Confidence 455666666777766666655421 111111100000 0134555555554 34778999999
Q ss_pred EcCccCC---hhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCCh
Q psy5825 310 HAAASLR---FDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQ 386 (596)
Q Consensus 310 H~AA~v~---~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e 386 (596)
|+||..+ +..+....+.+|+.||.++|-+|.+. + +||+|+||+.|||.... .|.+-++ |..
T Consensus 97 hLAapasp~~y~~npvktIktN~igtln~lglakrv-~-aR~l~aSTseVYgdp~~-----hpq~e~y--------wg~- 160 (350)
T KOG1429|consen 97 HLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-G-ARFLLASTSEVYGDPLV-----HPQVETY--------WGN- 160 (350)
T ss_pred hhccCCCCcccccCccceeeecchhhHHHHHHHHHh-C-ceEEEeecccccCCccc-----CCCcccc--------ccc-
Confidence 9999864 44555668889999999999999993 3 89999999999997431 1111110 100
Q ss_pred HHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccce
Q psy5825 387 EELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIH 464 (596)
Q Consensus 387 ~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~ 464 (596)
..|. + ....|...|.++|.|+..|+ .|+.+.|.|+.++|||.. .|.+. .....++....++...
T Consensus 161 -----vnpi---g-pr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm----~~~dg-rvvsnf~~q~lr~epl 226 (350)
T KOG1429|consen 161 -----VNPI---G-PRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM----HMDDG-RVVSNFIAQALRGEPL 226 (350)
T ss_pred -----cCcC---C-chhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc----ccCCC-hhhHHHHHHHhcCCCe
Confidence 0110 0 23579999999999999999 899999999999999864 34442 2223455556666677
Q ss_pred EeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 465 TFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 465 ~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.++|+|.+.+.|.||+|+++++++++.... ..-+||+|+ ..+|+.+|++++.++.+
T Consensus 227 tv~g~G~qtRSF~yvsD~Vegll~Lm~s~~--------------------~~pvNiGnp--~e~Tm~elAemv~~~~~ 282 (350)
T KOG1429|consen 227 TVYGDGKQTRSFQYVSDLVEGLLRLMESDY--------------------RGPVNIGNP--GEFTMLELAEMVKELIG 282 (350)
T ss_pred EEEcCCcceEEEEeHHHHHHHHHHHhcCCC--------------------cCCcccCCc--cceeHHHHHHHHHHHcC
Confidence 899999999999999999999999997643 234999999 78999999999999886
|
|
| >TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase | Back alignment and domain information |
|---|
Probab=99.84 E-value=1.3e-19 Score=185.90 Aligned_cols=184 Identities=18% Similarity=0.156 Sum_probs=134.8
Q ss_pred HHHHHHHhccc--cEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccc
Q psy5825 295 SHDQQFIQHHI--HVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEF 367 (596)
Q Consensus 295 ~~~~~~l~~~v--d~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~ 367 (596)
.+.+..++.++ |+||||||...... ....++.+|+.|+.+|+++|... ++ +|||+||++||+... .+.|+.
T Consensus 39 ~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~Ss~~vy~~~~~~~~~E~~ 116 (287)
T TIGR01214 39 PEALERLLRAIRPDAVVNTAAYTDVDGAESDPEKAFAVNALAPQNLARAAARH-GA-RLVHISTDYVFDGEGKRPYREDD 116 (287)
T ss_pred HHHHHHHHHhCCCCEEEECCccccccccccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeeeeecCCCCCCCCCCC
Confidence 34577777765 99999999865432 34557899999999999999883 44 899999999997532 222211
Q ss_pred cCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCC
Q psy5825 368 YPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNN 447 (596)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~ 447 (596)
. + . ..+.|+.+|+.+|++++.+ +++++|+||++|||+... +
T Consensus 117 ~-------------------------~----~-~~~~Y~~~K~~~E~~~~~~--~~~~~ilR~~~v~G~~~~----~--- 157 (287)
T TIGR01214 117 A-------------------------T----N-PLNVYGQSKLAGEQAIRAA--GPNALIVRTSWLYGGGGG----R--- 157 (287)
T ss_pred C-------------------------C----C-CcchhhHHHHHHHHHHHHh--CCCeEEEEeeecccCCCC----C---
Confidence 0 0 0 2357999999999999876 789999999999998531 0
Q ss_pred CCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCc
Q psy5825 448 LYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYP 527 (596)
Q Consensus 448 ~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~ 527 (596)
.....++..+..+....+.+ +...++++|+|+|++++.++.... ..+++|||+++ ..
T Consensus 158 -~~~~~~~~~~~~~~~~~~~~--~~~~~~v~v~Dva~a~~~~~~~~~------------------~~~~~~ni~~~--~~ 214 (287)
T TIGR01214 158 -NFVRTMLRLAGRGEELRVVD--DQIGSPTYAKDLARVIAALLQRLA------------------RARGVYHLANS--GQ 214 (287)
T ss_pred -CHHHHHHHHhhcCCCceEec--CCCcCCcCHHHHHHHHHHHHhhcc------------------CCCCeEEEECC--CC
Confidence 11223333333332222233 467899999999999999986531 14679999998 89
Q ss_pred ccHHHHHHHHHHHcc
Q psy5825 528 ITWLEYMNSVQAAGK 542 (596)
Q Consensus 528 vt~~el~~~l~~~~~ 542 (596)
+++.||++.+.+.++
T Consensus 215 ~s~~e~~~~i~~~~~ 229 (287)
T TIGR01214 215 CSWYEFAQAIFEEAG 229 (287)
T ss_pred cCHHHHHHHHHHHhC
Confidence 999999999999887
|
This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc. |
| >TIGR01179 galE UDP-glucose-4-epimerase | Back alignment and domain information |
|---|
Probab=99.84 E-value=2e-19 Score=187.35 Aligned_cols=210 Identities=19% Similarity=0.186 Sum_probs=148.7
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEec
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVS 352 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vS 352 (596)
++.++.+|+.++. .+..++. ++|+||||||...... .....+.+|+.|+.+|+++|.. .++.+|||+|
T Consensus 48 ~~~~~~~D~~~~~------~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~s 120 (328)
T TIGR01179 48 RVTFVEGDLRDRE------LLDRLFEEHKIDAVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQ-TGVKKFIFSS 120 (328)
T ss_pred ceEEEECCCCCHH------HHHHHHHhCCCcEEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHh-cCCCEEEEec
Confidence 5778899999754 3666665 6999999999764322 3345778999999999999998 5788999999
Q ss_pred CcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---cCCCEEE
Q psy5825 353 TLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---YKLPLAM 427 (596)
Q Consensus 353 S~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---~gl~~~I 427 (596)
|+++||... .+.|+. +. . ..+.|+.+|+++|+++..++ .+++++|
T Consensus 121 s~~~~g~~~~~~~~e~~--------------------------~~---~-~~~~y~~sK~~~e~~~~~~~~~~~~~~~~i 170 (328)
T TIGR01179 121 SAAVYGEPSSIPISEDS--------------------------PL---G-PINPYGRSKLMSERILRDLSKADPGLSYVI 170 (328)
T ss_pred chhhcCCCCCCCccccC--------------------------CC---C-CCCchHHHHHHHHHHHHHHHHhccCCCEEE
Confidence 999997532 222211 00 0 23579999999999999876 6899999
Q ss_pred ecCCccccCCCCCccccCCC-CCCcHHHHHHHHhccce--Eee------cCCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 428 VRPSIVVSTWKEPIVGWSNN-LYGPGGAAAGAALGLIH--TFY------AKHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 428 lRp~~V~G~~~~p~~G~~~~-~~~~~~l~~~~~~g~~~--~~~------~~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
+||++|||+...+..|+... .......+.....|... .++ +++...++||||+|+|++++.++......
T Consensus 171 lR~~~v~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~v~~~D~a~~~~~~~~~~~~~-- 248 (328)
T TIGR01179 171 LRYFNVAGADPEGTIGEDPPGITHLIPYACQVAVGKRDKLTIFGTDYPTPDGTCVRDYIHVMDLADAHLAALEYLLNG-- 248 (328)
T ss_pred EecCcccCCCCCCccccCCcccchHHHHHHHHHHhCCCCeEEeCCcccCCCCceEEeeeeHHHHHHHHHHHHhhhhcC--
Confidence 99999999865443333211 01111122222222111 111 24567789999999999999988653211
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ .++++.||++.+.+.++
T Consensus 249 --------------~~~~~~n~~~~--~~~s~~ei~~~~~~~~g 276 (328)
T TIGR01179 249 --------------GESHVYNLGYG--QGFSVLEVIEAFKKVSG 276 (328)
T ss_pred --------------CCcceEEcCCC--CcccHHHHHHHHHHHhC
Confidence 24689999998 88999999999999987
|
This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately. |
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.83 E-value=1.2e-19 Score=192.99 Aligned_cols=204 Identities=12% Similarity=0.077 Sum_probs=144.2
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTL 354 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~ 354 (596)
++.++.+||+++. .+..+++++|+|||+|+.++... ....+..+|+.||.+|+++|....++++|||+||+
T Consensus 108 ~~~~v~~Dl~d~~------~l~~~i~~~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~~~v~r~V~~SS~ 181 (367)
T PLN02686 108 GIWTVMANLTEPE------SLHEAFDGCAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRTESVRKCVFTSSL 181 (367)
T ss_pred ceEEEEcCCCCHH------HHHHHHHhccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhcCCccEEEEeccH
Confidence 5889999999765 37888889999999999875432 12356788999999999999974479999999997
Q ss_pred c--cccCCc------cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 355 Y--THSYRE------DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 355 ~--v~g~~~------~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
+ +||... .++|+. |.++.. + .. ..+.|+.||+++|++++.++ .|++
T Consensus 182 ~~~vyg~~~~~~~~~~i~E~~---------------~~~~~~-----~---~~-p~~~Y~~sK~~~E~~~~~~~~~~gl~ 237 (367)
T PLN02686 182 LACVWRQNYPHDLPPVIDEES---------------WSDESF-----C---RD-NKLWYALGKLKAEKAAWRAARGKGLK 237 (367)
T ss_pred HHhcccccCCCCCCcccCCCC---------------CCChhh-----c---cc-ccchHHHHHHHHHHHHHHHHHhcCce
Confidence 4 665310 122211 000000 0 00 22569999999999999877 7999
Q ss_pred EEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCC
Q psy5825 425 LAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPA 504 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~ 504 (596)
++++||++|||+..... .+.. +..+..|.+ .++++ ..++|+||+|||+++++++......
T Consensus 238 ~v~lRp~~vyGp~~~~~--------~~~~-~~~~~~g~~-~~~g~--g~~~~v~V~Dva~A~~~al~~~~~~-------- 297 (367)
T PLN02686 238 LATICPALVTGPGFFRR--------NSTA-TIAYLKGAQ-EMLAD--GLLATADVERLAEAHVCVYEAMGNK-------- 297 (367)
T ss_pred EEEEcCCceECCCCCCC--------CChh-HHHHhcCCC-ccCCC--CCcCeEEHHHHHHHHHHHHhccCCC--------
Confidence 99999999999854210 1122 223444543 23343 3457999999999999998642110
Q ss_pred CcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 505 SLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 505 ~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++| ++++ .++++.++++.|.+.++
T Consensus 298 --------~~~~~y-i~~g--~~~s~~e~~~~i~~~~g 324 (367)
T PLN02686 298 --------TAFGRY-ICFD--HVVSREDEAEELARQIG 324 (367)
T ss_pred --------CCCCcE-EEeC--CCccHHHHHHHHHHHcC
Confidence 235688 7777 78999999999999987
|
|
| >KOG1371|consensus | Back alignment and domain information |
|---|
Probab=99.83 E-value=4.3e-20 Score=183.95 Aligned_cols=249 Identities=20% Similarity=0.148 Sum_probs=175.3
Q ss_pred cCCCCCCCCCCCCcCeEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHh
Q psy5825 223 SHKSSAGPKCYPEVGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQ 302 (596)
Q Consensus 223 ~~~~~~lL~~~~~v~~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~ 302 (596)
||.+++||+..-+|--|--|+|.- ..+..|+++++.. ..+|.|+.|||+|..+ ++.++
T Consensus 16 sht~l~L~~~gy~v~~vDNl~n~~--~~sl~r~~~l~~~--------------~~~v~f~~~Dl~D~~~------L~kvF 73 (343)
T KOG1371|consen 16 SHTVLALLKRGYGVVIVDNLNNSY--LESLKRVRQLLGE--------------GKSVFFVEGDLNDAEA------LEKLF 73 (343)
T ss_pred hHHHHHHHhCCCcEEEEecccccc--hhHHHHHHHhcCC--------------CCceEEEEeccCCHHH------HHHHH
Confidence 567777787654443333444432 2344555554321 1689999999997654 88888
Q ss_pred cc--ccEEEEcCccCChhhhH---HHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChH
Q psy5825 303 HH--IHVIIHAAASLRFDELI---QDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYE 375 (596)
Q Consensus 303 ~~--vd~ViH~AA~v~~~~~~---~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~ 375 (596)
.. .|.|+|+||.-....+. ..++..|+.||.+||+.|.+ .+++.|||+||+.|||... ++.|..
T Consensus 74 ~~~~fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~-~~~~~~V~sssatvYG~p~~ip~te~~-------- 144 (343)
T KOG1371|consen 74 SEVKFDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKA-HNVKALVFSSSATVYGLPTKVPITEED-------- 144 (343)
T ss_pred hhcCCceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHH-cCCceEEEecceeeecCcceeeccCcC--------
Confidence 64 69999999986543332 45889999999999999999 5699999999999999754 333321
Q ss_pred HHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHH
Q psy5825 376 DLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGG 453 (596)
Q Consensus 376 ~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~ 453 (596)
| ... ..+.||.||.+.|.++..+. .++.+++||.++++|....+.+|.. .+..+.+
T Consensus 145 ------------------~--t~~-p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p~Gr~ge~-p~~~~nn 202 (343)
T KOG1371|consen 145 ------------------P--TDQ-PTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHPSGRIGEA-PLGIPNN 202 (343)
T ss_pred ------------------C--CCC-CCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccccCccCCC-CccCccc
Confidence 1 011 34779999999999999988 6799999999999996544443321 1222233
Q ss_pred HH---HHHHhccceE--e------ecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccC
Q psy5825 454 AA---AGAALGLIHT--F------YAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSI 522 (596)
Q Consensus 454 l~---~~~~~g~~~~--~------~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~ 522 (596)
++ ...+.|..+. + ..+++..+|+|+|-|.|++.+.++...... ....+||+++
T Consensus 203 l~p~v~~vaigr~~~l~v~g~d~~t~dgt~vrdyi~v~Dla~~h~~al~k~~~~----------------~~~~i~Nlgt 266 (343)
T KOG1371|consen 203 LLPYVFQVAIGRRPNLQVVGRDYTTIDGTIVRDYIHVLDLADGHVAALGKLRGA----------------AEFGVYNLGT 266 (343)
T ss_pred ccccccchhhcccccceeecCcccccCCCeeecceeeEehHHHHHHHhhccccc----------------hheeeEeecC
Confidence 32 2222232211 1 135688999999999999999998764321 1244999999
Q ss_pred CCCCcccHHHHHHHHHHHcc
Q psy5825 523 SSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 523 ~~~~~vt~~el~~~l~~~~~ 542 (596)
+ .+.++.+|+..+..+.+
T Consensus 267 g--~g~~V~~lv~a~~k~~g 284 (343)
T KOG1371|consen 267 G--KGSSVLELVTAFEKALG 284 (343)
T ss_pred C--CCccHHHHHHHHHHHhc
Confidence 9 89999999999999888
|
|
| >PLN02583 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=7.7e-19 Score=181.51 Aligned_cols=198 Identities=8% Similarity=0.056 Sum_probs=139.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh-hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF-DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
.++.++.+||++.. .+..++.++|+|||+++.... ......++++|+.||.+|+++|....++++|||+||++
T Consensus 57 ~~~~~~~~Dl~d~~------~~~~~l~~~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~riV~~SS~~ 130 (297)
T PLN02583 57 ERLKVFDVDPLDYH------SILDALKGCSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQTDTIEKVVFTSSLT 130 (297)
T ss_pred CceEEEEecCCCHH------HHHHHHcCCCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhcCCccEEEEecchH
Confidence 46899999999764 377888999999999876532 22345689999999999999998744688999999998
Q ss_pred cccCC--c-----cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEE
Q psy5825 356 THSYR--E-----DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLA 426 (596)
Q Consensus 356 v~g~~--~-----~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~ 426 (596)
+++.. . .++|+.+ .+.... .. ....|+.||.+||++++.++ .|++++
T Consensus 131 a~~~~~~~~~~~~~~~E~~~---------------~~~~~~--------~~-~~~~Y~~sK~~aE~~~~~~~~~~gi~~v 186 (297)
T PLN02583 131 AVIWRDDNISTQKDVDERSW---------------SDQNFC--------RK-FKLWHALAKTLSEKTAWALAMDRGVNMV 186 (297)
T ss_pred heecccccCCCCCCCCcccC---------------CCHHHH--------hh-cccHHHHHHHHHHHHHHHHHHHhCCcEE
Confidence 75321 0 1222110 000000 00 12359999999999999887 799999
Q ss_pred EecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASL 506 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~ 506 (596)
++||++|||+...+. .. +..+....+ +...+.||+|+|||+++++++..+.
T Consensus 187 ~lrp~~v~Gp~~~~~----------~~----~~~~~~~~~---~~~~~~~v~V~Dva~a~~~al~~~~------------ 237 (297)
T PLN02583 187 SINAGLLMGPSLTQH----------NP----YLKGAAQMY---ENGVLVTVDVNFLVDAHIRAFEDVS------------ 237 (297)
T ss_pred EEcCCcccCCCCCCc----------hh----hhcCCcccC---cccCcceEEHHHHHHHHHHHhcCcc------------
Confidence 999999999854211 01 112221111 1235679999999999999997532
Q ss_pred CCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 507 VAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 507 ~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.++.|+|+++ ....+.++++++.+.++
T Consensus 238 -------~~~r~~~~~~--~~~~~~~~~~~~~~~~p 264 (297)
T PLN02583 238 -------SYGRYLCFNH--IVNTEEDAVKLAQMLSP 264 (297)
T ss_pred -------cCCcEEEecC--CCccHHHHHHHHHHhCC
Confidence 2447999987 55567889999999887
|
|
| >PLN02778 3,5-epimerase/4-reductase | Back alignment and domain information |
|---|
Probab=99.82 E-value=1.6e-18 Score=179.19 Aligned_cols=215 Identities=14% Similarity=0.065 Sum_probs=144.5
Q ss_pred CeEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCcc
Q psy5825 237 GGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAAS 314 (596)
Q Consensus 237 ~~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~ 314 (596)
...-+||.+..|.-+..-++.++..+ ..|.+..+|+.+.. .+...+. ++|+||||||.
T Consensus 8 ~~~kiLVtG~tGfiG~~l~~~L~~~g--------------~~V~~~~~~~~~~~------~v~~~l~~~~~D~ViH~Aa~ 67 (298)
T PLN02778 8 ATLKFLIYGKTGWIGGLLGKLCQEQG--------------IDFHYGSGRLENRA------SLEADIDAVKPTHVFNAAGV 67 (298)
T ss_pred CCCeEEEECCCCHHHHHHHHHHHhCC--------------CEEEEecCccCCHH------HHHHHHHhcCCCEEEECCcc
Confidence 34568888888877765555443321 24555566766432 2444444 68999999998
Q ss_pred CCh------hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--c------ccccccCCCCChHHHHHH
Q psy5825 315 LRF------DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--D------IQEEFYPPLFSYEDLAHV 380 (596)
Q Consensus 315 v~~------~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~------i~E~~~~~~~~~~~~~~~ 380 (596)
+.. ......++.+|+.||.+|+++|.. .+++ ++|+||.+||+... . +.|+.
T Consensus 68 ~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~-~gv~-~v~~sS~~vy~~~~~~p~~~~~~~~Ee~------------- 132 (298)
T PLN02778 68 TGRPNVDWCESHKVETIRANVVGTLTLADVCRE-RGLV-LTNYATGCIFEYDDAHPLGSGIGFKEED------------- 132 (298)
T ss_pred cCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHH-hCCC-EEEEecceEeCCCCCCCcccCCCCCcCC-------------
Confidence 742 234566889999999999999998 4665 67778878886422 0 11110
Q ss_pred HhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHh
Q psy5825 381 MQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAAL 460 (596)
Q Consensus 381 ~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~ 460 (596)
.|. . ..+.|+.||+++|+++..+. ...++|+++++|... ..+..++..+..
T Consensus 133 ------------~p~---~-~~s~Yg~sK~~~E~~~~~y~---~~~~lr~~~~~~~~~----------~~~~~fi~~~~~ 183 (298)
T PLN02778 133 ------------TPN---F-TGSFYSKTKAMVEELLKNYE---NVCTLRVRMPISSDL----------SNPRNFITKITR 183 (298)
T ss_pred ------------CCC---C-CCCchHHHHHHHHHHHHHhh---ccEEeeecccCCccc----------ccHHHHHHHHHc
Confidence 010 0 22679999999999998874 467889888777521 112234444444
Q ss_pred ccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHH
Q psy5825 461 GLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAA 540 (596)
Q Consensus 461 g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~ 540 (596)
+....+.+ .+|+||+|++++++.++... .+++||++++ .++++.+|++.+.+.
T Consensus 184 ~~~~~~~~-----~s~~yv~D~v~al~~~l~~~--------------------~~g~yNigs~--~~iS~~el~~~i~~~ 236 (298)
T PLN02778 184 YEKVVNIP-----NSMTILDELLPISIEMAKRN--------------------LTGIYNFTNP--GVVSHNEILEMYRDY 236 (298)
T ss_pred CCCeeEcC-----CCCEEHHHHHHHHHHHHhCC--------------------CCCeEEeCCC--CcccHHHHHHHHHHH
Confidence 43211211 37999999999999987531 2359999999 899999999999998
Q ss_pred cc
Q psy5825 541 GK 542 (596)
Q Consensus 541 ~~ 542 (596)
++
T Consensus 237 ~~ 238 (298)
T PLN02778 237 ID 238 (298)
T ss_pred hC
Confidence 88
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=99.81 E-value=4.3e-19 Score=185.10 Aligned_cols=180 Identities=15% Similarity=0.107 Sum_probs=136.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
..++++.||++++. .+..+++++|+||||++.. ......++.+|+.|+.+|+++|.. .++++|||+||.++
T Consensus 43 ~~v~~v~~Dl~d~~------~l~~al~g~d~Vi~~~~~~--~~~~~~~~~~~~~~~~~l~~aa~~-~gvkr~I~~Ss~~~ 113 (317)
T CHL00194 43 WGAELVYGDLSLPE------TLPPSFKGVTAIIDASTSR--PSDLYNAKQIDWDGKLALIEAAKA-AKIKRFIFFSILNA 113 (317)
T ss_pred cCCEEEECCCCCHH------HHHHHHCCCCEEEECCCCC--CCCccchhhhhHHHHHHHHHHHHH-cCCCEEEEeccccc
Confidence 46889999999765 4888899999999998643 223345778999999999999998 68999999999654
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
... ....|..+|+.+|+++.. .+++++|+||+.+|+.
T Consensus 114 ~~~-----------------------------------------~~~~~~~~K~~~e~~l~~--~~l~~tilRp~~~~~~ 150 (317)
T CHL00194 114 EQY-----------------------------------------PYIPLMKLKSDIEQKLKK--SGIPYTIFRLAGFFQG 150 (317)
T ss_pred ccc-----------------------------------------CCChHHHHHHHHHHHHHH--cCCCeEEEeecHHhhh
Confidence 211 113489999999999865 5899999999988763
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPP 516 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (596)
.. ..++..+..+.. .+.+++...++||+|+|||++++.++..+. ..++
T Consensus 151 ~~-------------~~~~~~~~~~~~-~~~~~~~~~~~~i~v~Dva~~~~~~l~~~~------------------~~~~ 198 (317)
T CHL00194 151 LI-------------SQYAIPILEKQP-IWITNESTPISYIDTQDAAKFCLKSLSLPE------------------TKNK 198 (317)
T ss_pred hh-------------hhhhhhhccCCc-eEecCCCCccCccCHHHHHHHHHHHhcCcc------------------ccCc
Confidence 11 011111222222 233445677899999999999998886432 2478
Q ss_pred eEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 517 VYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 517 vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+||++++ +.+|+.|+++.+.+.++
T Consensus 199 ~~ni~g~--~~~s~~el~~~~~~~~g 222 (317)
T CHL00194 199 TFPLVGP--KSWNSSEIISLCEQLSG 222 (317)
T ss_pred EEEecCC--CccCHHHHHHHHHHHhC
Confidence 9999999 89999999999999988
|
|
| >PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1 | Back alignment and domain information |
|---|
Probab=99.81 E-value=2.1e-18 Score=177.04 Aligned_cols=187 Identities=19% Similarity=0.144 Sum_probs=123.5
Q ss_pred CHHHHHHHhcc--ccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--ccccc
Q psy5825 294 SSHDQQFIQHH--IHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEE 366 (596)
Q Consensus 294 ~~~~~~~l~~~--vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~ 366 (596)
+...+..++.. .|+||||||..+... ....++.+|+.++.+|+++|... + .+|||+||.+||+... .+.|+
T Consensus 39 d~~~~~~~~~~~~pd~Vin~aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-~-~~li~~STd~VFdG~~~~~y~E~ 116 (286)
T PF04321_consen 39 DPEAVAKLLEAFKPDVVINCAAYTNVDACEKNPEEAYAINVDATKNLAEACKER-G-ARLIHISTDYVFDGDKGGPYTED 116 (286)
T ss_dssp SHHHHHHHHHHH--SEEEE------HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-T--EEEEEEEGGGS-SSTSSSB-TT
T ss_pred CHHHHHHHHHHhCCCeEeccceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-C-CcEEEeeccEEEcCCcccccccC
Confidence 34556677654 799999999987543 45679999999999999999982 3 6999999999997542 23332
Q ss_pred ccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCC
Q psy5825 367 FYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSN 446 (596)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~ 446 (596)
..+. ..|.||.+|+.+|+++++..+ .++|+|+++|||....
T Consensus 117 d~~~------------------------------P~~~YG~~K~~~E~~v~~~~~--~~~IlR~~~~~g~~~~------- 157 (286)
T PF04321_consen 117 DPPN------------------------------PLNVYGRSKLEGEQAVRAACP--NALILRTSWVYGPSGR------- 157 (286)
T ss_dssp S----------------------------------SSHHHHHHHHHHHHHHHH-S--SEEEEEE-SEESSSSS-------
T ss_pred CCCC------------------------------CCCHHHHHHHHHHHHHHHhcC--CEEEEecceecccCCC-------
Confidence 1110 337899999999999998653 8999999999997321
Q ss_pred CCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCC
Q psy5825 447 NLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSY 526 (596)
Q Consensus 447 ~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~ 526 (596)
+....++..+..|....+ ..+.....++|+|+|.+++.++.....+. ...++||++++ .
T Consensus 158 --~~~~~~~~~~~~~~~i~~--~~d~~~~p~~~~dlA~~i~~l~~~~~~~~---------------~~~Giyh~~~~--~ 216 (286)
T PF04321_consen 158 --NFLRWLLRRLRQGEPIKL--FDDQYRSPTYVDDLARVILELIEKNLSGA---------------SPWGIYHLSGP--E 216 (286)
T ss_dssp --SHHHHHHHHHHCTSEEEE--ESSCEE--EEHHHHHHHHHHHHHHHHH-G---------------GG-EEEE---B--S
T ss_pred --chhhhHHHHHhcCCeeEe--eCCceeCCEEHHHHHHHHHHHHHhccccc---------------ccceeEEEecC--c
Confidence 112233334444443233 34678899999999999999998764311 23679999999 8
Q ss_pred cccHHHHHHHHHHHcc
Q psy5825 527 PITWLEYMNSVQAAGK 542 (596)
Q Consensus 527 ~vt~~el~~~l~~~~~ 542 (596)
.+++.||+..+.+.++
T Consensus 217 ~~S~~e~~~~i~~~~~ 232 (286)
T PF04321_consen 217 RVSRYEFAEAIAKILG 232 (286)
T ss_dssp -EEHHHHHHHHHHHHT
T ss_pred ccCHHHHHHHHHHHhC
Confidence 8999999999999888
|
1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=99.80 E-value=2.2e-18 Score=184.50 Aligned_cols=182 Identities=15% Similarity=0.162 Sum_probs=138.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc----cccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEec
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH----HIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVS 352 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~----~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vS 352 (596)
.+++++.||++++. .+..+++ ++|+||||++.... .....+.+|+.|+.+|+++|.. .++++|||+|
T Consensus 111 ~~v~~v~~Dl~d~~------~l~~~~~~~~~~~D~Vi~~aa~~~~--~~~~~~~vn~~~~~~ll~aa~~-~gv~r~V~iS 181 (390)
T PLN02657 111 PGAEVVFGDVTDAD------SLRKVLFSEGDPVDVVVSCLASRTG--GVKDSWKIDYQATKNSLDAGRE-VGAKHFVLLS 181 (390)
T ss_pred CCceEEEeeCCCHH------HHHHHHHHhCCCCcEEEECCccCCC--CCccchhhHHHHHHHHHHHHHH-cCCCEEEEEe
Confidence 46899999999764 3777776 59999999985321 1224578899999999999998 5789999999
Q ss_pred CcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCc
Q psy5825 353 TLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSI 432 (596)
Q Consensus 353 S~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~ 432 (596)
|.++++. .+.|..+|..+|+.+.....+++++|+||+.
T Consensus 182 S~~v~~p------------------------------------------~~~~~~sK~~~E~~l~~~~~gl~~tIlRp~~ 219 (390)
T PLN02657 182 AICVQKP------------------------------------------LLEFQRAKLKFEAELQALDSDFTYSIVRPTA 219 (390)
T ss_pred eccccCc------------------------------------------chHHHHHHHHHHHHHHhccCCCCEEEEccHH
Confidence 9987541 1348899999999987633799999999999
Q ss_pred cccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCc-cccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCC
Q psy5825 433 VVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK-CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIP 511 (596)
Q Consensus 433 V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~-~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~ 511 (596)
+||+. ..++..+..|....++|++... .++|+|+|+|.+++.++....
T Consensus 220 ~~~~~--------------~~~~~~~~~g~~~~~~GdG~~~~~~~I~v~DlA~~i~~~~~~~~----------------- 268 (390)
T PLN02657 220 FFKSL--------------GGQVEIVKDGGPYVMFGDGKLCACKPISEADLASFIADCVLDES----------------- 268 (390)
T ss_pred Hhccc--------------HHHHHhhccCCceEEecCCcccccCceeHHHHHHHHHHHHhCcc-----------------
Confidence 98741 1222333345444456776653 468999999999998886432
Q ss_pred CCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 512 RTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 512 ~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||++++ ..+|+.|+++++.+.++
T Consensus 269 -~~~~~~~Iggp~-~~~S~~Eia~~l~~~lG 297 (390)
T PLN02657 269 -KINKVLPIGGPG-KALTPLEQGEMLFRILG 297 (390)
T ss_pred -ccCCEEEcCCCC-cccCHHHHHHHHHHHhC
Confidence 247899998741 47999999999999888
|
|
| >COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.79 E-value=9e-18 Score=167.88 Aligned_cols=186 Identities=22% Similarity=0.205 Sum_probs=138.5
Q ss_pred eccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccccc
Q psy5825 284 GDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHS 358 (596)
Q Consensus 284 GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g 358 (596)
.||+++. .+..++.. .|+||||||.++++. ....++.+|+.|+.||.++|... -.++||+||.+|+.
T Consensus 34 ~Ditd~~------~v~~~i~~~~PDvVIn~AAyt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~--ga~lVhiSTDyVFD 105 (281)
T COG1091 34 LDITDPD------AVLEVIRETRPDVVINAAAYTAVDKAESEPELAFAVNATGAENLARAAAEV--GARLVHISTDYVFD 105 (281)
T ss_pred ccccChH------HHHHHHHhhCCCEEEECccccccccccCCHHHHHHhHHHHHHHHHHHHHHh--CCeEEEeecceEec
Confidence 4666554 37777775 599999999988664 34668999999999999999983 36899999999986
Q ss_pred CCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 359 YRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 359 ~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
... ...|+..+. +.|.||+||+++|+.+..+ +-..+|+|.++|||.
T Consensus 106 G~~~~~Y~E~D~~~------------------------------P~nvYG~sKl~GE~~v~~~--~~~~~I~Rtswv~g~ 153 (281)
T COG1091 106 GEKGGPYKETDTPN------------------------------PLNVYGRSKLAGEEAVRAA--GPRHLILRTSWVYGE 153 (281)
T ss_pred CCCCCCCCCCCCCC------------------------------ChhhhhHHHHHHHHHHHHh--CCCEEEEEeeeeecC
Confidence 533 233332221 2367999999999999987 467899999999997
Q ss_pred CCCCccccCCCCCCcHHHHHH-HHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAG-AALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDP 515 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~-~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (596)
... + +...++. ...|.- +..-.++....+++.|+|++|+.++.... .+
T Consensus 154 ~g~---------n-Fv~tml~la~~~~~--l~vv~Dq~gsPt~~~dlA~~i~~ll~~~~-------------------~~ 202 (281)
T COG1091 154 YGN---------N-FVKTMLRLAKEGKE--LKVVDDQYGSPTYTEDLADAILELLEKEK-------------------EG 202 (281)
T ss_pred CCC---------C-HHHHHHHHhhcCCc--eEEECCeeeCCccHHHHHHHHHHHHhccc-------------------cC
Confidence 421 1 2223333 333322 22335677889999999999999886542 34
Q ss_pred CeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 516 PVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 516 ~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
++||+++. ..+||.||+..|.+.++
T Consensus 203 ~~yH~~~~--g~~Swydfa~~I~~~~~ 227 (281)
T COG1091 203 GVYHLVNS--GECSWYEFAKAIFEEAG 227 (281)
T ss_pred cEEEEeCC--CcccHHHHHHHHHHHhC
Confidence 59999998 67899999999999876
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=99.79 E-value=1.4e-18 Score=174.76 Aligned_cols=182 Identities=15% Similarity=0.136 Sum_probs=129.8
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
+.++.||+++... +..+++ ++|+|||+||+-+. ...+.+++.+||.||.||+++|.. .++++||++||
T Consensus 56 ~~~vigDvrd~~~------l~~~~~~~~pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~-~~v~~~v~IST 128 (293)
T PF02719_consen 56 IVPVIGDVRDKER------LNRIFEEYKPDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIE-HGVERFVFIST 128 (293)
T ss_dssp EE--CTSCCHHHH------HHHHTT--T-SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHH-TT-SEEEEEEE
T ss_pred cCceeecccCHHH------HHHHHhhcCCCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEccc
Confidence 4567999996543 888888 89999999998542 234567899999999999999999 68999999999
Q ss_pred cccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--c---CCCEEEe
Q psy5825 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--Y---KLPLAMV 428 (596)
Q Consensus 354 ~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~---gl~~~Il 428 (596)
.-+.- +.|.||.||.+||+++..+. . +..++++
T Consensus 129 DKAv~------------------------------------------PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~V 166 (293)
T PF02719_consen 129 DKAVN------------------------------------------PTNVMGATKRLAEKLVQAANQYSGNSDTKFSSV 166 (293)
T ss_dssp CGCSS--------------------------------------------SHHHHHHHHHHHHHHHHCCTSSSS--EEEEE
T ss_pred cccCC------------------------------------------CCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEE
Confidence 86542 23779999999999999988 2 4689999
Q ss_pred cCCccccCCCCCccccCCCCCCcHHHH-HHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcC
Q psy5825 429 RPSIVVSTWKEPIVGWSNNLYGPGGAA-AGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLV 507 (596)
Q Consensus 429 Rp~~V~G~~~~p~~G~~~~~~~~~~l~-~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~ 507 (596)
|+|+|.|+.- . ...+| ..+..|.. .-..+++..+-|+-++++++.++.++...
T Consensus 167 RFGNVlgS~G----------S-Vip~F~~Qi~~g~P-lTvT~p~mtRffmti~EAv~Lvl~a~~~~-------------- 220 (293)
T PF02719_consen 167 RFGNVLGSRG----------S-VIPLFKKQIKNGGP-LTVTDPDMTRFFMTIEEAVQLVLQAAALA-------------- 220 (293)
T ss_dssp EE-EETTGTT----------S-CHHHHHHHHHTTSS-EEECETT-EEEEE-HHHHHHHHHHHHHH---------------
T ss_pred EecceecCCC----------c-HHHHHHHHHHcCCc-ceeCCCCcEEEEecHHHHHHHHHHHHhhC--------------
Confidence 9999999742 1 23444 44555543 33346788899999999999999888653
Q ss_pred CCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 508 APIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 508 ~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+|++|.+--| .++.+.||+..+.++.+
T Consensus 221 -----~~geifvl~mg--~~v~I~dlA~~~i~~~g 248 (293)
T PF02719_consen 221 -----KGGEIFVLDMG--EPVKILDLAEAMIELSG 248 (293)
T ss_dssp ------TTEEEEE-----TCEECCCHHHHHHHHTT
T ss_pred -----CCCcEEEecCC--CCcCHHHHHHHHHhhcc
Confidence 35889999888 89999999999998876
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=99.78 E-value=4.3e-18 Score=181.94 Aligned_cols=179 Identities=13% Similarity=0.062 Sum_probs=132.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--ccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--HHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTL 354 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~ 354 (596)
..++++.||+.+ +..++ .++|+|||+++. ++.++.+|+++|.. .++++|||+||+
T Consensus 110 ~~v~~v~~D~~d---------~~~~~~~~~~d~Vi~~~~~-------------~~~~~~~ll~aa~~-~gvkr~V~~SS~ 166 (378)
T PLN00016 110 AGVKTVWGDPAD---------VKSKVAGAGFDVVYDNNGK-------------DLDEVEPVADWAKS-PGLKQFLFCSSA 166 (378)
T ss_pred cCceEEEecHHH---------HHhhhccCCccEEEeCCCC-------------CHHHHHHHHHHHHH-cCCCEEEEEccH
Confidence 358899999975 22333 479999999763 24578999999998 589999999999
Q ss_pred ccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCc
Q psy5825 355 YTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSI 432 (596)
Q Consensus 355 ~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~ 432 (596)
+|||... ...|. . ..+++. +|+.+|.++.. .+++++|+||++
T Consensus 167 ~vyg~~~~~p~~E~--------------------------~-------~~~p~~-sK~~~E~~l~~--~~l~~~ilRp~~ 210 (378)
T PLN00016 167 GVYKKSDEPPHVEG--------------------------D-------AVKPKA-GHLEVEAYLQK--LGVNWTSFRPQY 210 (378)
T ss_pred hhcCCCCCCCCCCC--------------------------C-------cCCCcc-hHHHHHHHHHH--cCCCeEEEecee
Confidence 9998532 11110 0 111233 89999999875 489999999999
Q ss_pred cccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCC
Q psy5825 433 VVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPR 512 (596)
Q Consensus 433 V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~ 512 (596)
|||+...+ .....++..+..|....+++++...++|+||+|+|++++.++....
T Consensus 211 vyG~~~~~--------~~~~~~~~~~~~~~~i~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~------------------ 264 (378)
T PLN00016 211 IYGPGNNK--------DCEEWFFDRLVRGRPVPIPGSGIQLTQLGHVKDLASMFALVVGNPK------------------ 264 (378)
T ss_pred EECCCCCC--------chHHHHHHHHHcCCceeecCCCCeeeceecHHHHHHHHHHHhcCcc------------------
Confidence 99985321 1112233344555444566778888999999999999999986532
Q ss_pred CCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 513 TDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 513 ~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ ..+|+.++++.|.+.++
T Consensus 265 ~~~~~yni~~~--~~~s~~el~~~i~~~~g 292 (378)
T PLN00016 265 AAGQIFNIVSD--RAVTFDGMAKACAKAAG 292 (378)
T ss_pred ccCCEEEecCC--CccCHHHHHHHHHHHhC
Confidence 24689999998 88999999999999887
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=99.78 E-value=1.2e-17 Score=171.45 Aligned_cols=181 Identities=14% Similarity=0.060 Sum_probs=126.7
Q ss_pred HHHhccccEEEEcCccCChhh-----hHHHHHHHHHHHHHHHHHHHHhcCCC--ceEEEecCcccccCCc--cccccccC
Q psy5825 299 QFIQHHIHVIIHAAASLRFDE-----LIQDAFTLNIQATRELLDLATRCSQL--KAILHVSTLYTHSYRE--DIQEEFYP 369 (596)
Q Consensus 299 ~~l~~~vd~ViH~AA~v~~~~-----~~~~~~~~NV~GT~~LL~~a~~~~~v--krfV~vSS~~v~g~~~--~i~E~~~~ 369 (596)
...+.++|+||||||...+.. ....++.+|+.||.+|+++|.. .++ ..||++||+++||... .+.|+..
T Consensus 52 ~~~~~~~D~Vvh~a~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~~~~i~~S~~~~yg~~~~~~~~E~~~- 129 (292)
T TIGR01777 52 SEALEGADAVINLAGEPIADKRWTEERKQEIRDSRIDTTRALVEAIAA-AEQKPKVFISASAVGYYGTSEDRVFTEEDS- 129 (292)
T ss_pred hhhcCCCCEEEECCCCCcccccCCHHHHHHHHhcccHHHHHHHHHHHh-cCCCceEEEEeeeEEEeCCCCCCCcCcccC-
Confidence 445678999999999764321 2345788999999999999998 454 4677788888888532 2222210
Q ss_pred CCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCCCC
Q psy5825 370 PLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNL 448 (596)
Q Consensus 370 ~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~ 448 (596)
+. ..+.|+..+...|.++..+. .+++++|+||++|||+.. ++
T Consensus 130 ------------------------~~-----~~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~----~~---- 172 (292)
T TIGR01777 130 ------------------------PA-----GDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG----GA---- 172 (292)
T ss_pred ------------------------CC-----CCChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc----ch----
Confidence 00 11246666777787776555 689999999999999742 11
Q ss_pred CCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcc
Q psy5825 449 YGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPI 528 (596)
Q Consensus 449 ~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~v 528 (596)
...++..+..+ ....+++++..++||||+|+|++++.++.... ..++||++++ .++
T Consensus 173 --~~~~~~~~~~~-~~~~~g~~~~~~~~i~v~Dva~~i~~~l~~~~-------------------~~g~~~~~~~--~~~ 228 (292)
T TIGR01777 173 --LAKMLPPFRLG-LGGPLGSGRQWFSWIHIEDLVQLILFALENAS-------------------ISGPVNATAP--EPV 228 (292)
T ss_pred --hHHHHHHHhcC-cccccCCCCcccccEeHHHHHHHHHHHhcCcc-------------------cCCceEecCC--Ccc
Confidence 11222111111 11224677889999999999999999986432 2458999998 899
Q ss_pred cHHHHHHHHHHHcc
Q psy5825 529 TWLEYMNSVQAAGK 542 (596)
Q Consensus 529 t~~el~~~l~~~~~ 542 (596)
++.||++.|.+.++
T Consensus 229 s~~di~~~i~~~~g 242 (292)
T TIGR01777 229 RNKEFAKALARALH 242 (292)
T ss_pred CHHHHHHHHHHHhC
Confidence 99999999999887
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=99.77 E-value=3.7e-17 Score=174.16 Aligned_cols=221 Identities=15% Similarity=0.121 Sum_probs=168.1
Q ss_pred EEEEeCCCCcccHHHHHHHHhhh-------------hhHHHhhhhhhhh-hcCcEEEEEeccCCCCCCCCHHHHHHHhcc
Q psy5825 239 IYILLRSKKNKTVQERLAEQFKD-------------ELFDRLKNEQADI-LQRKVHIISGDISQPSLGISSHDQQFIQHH 304 (596)
Q Consensus 239 V~~LvR~~~~~~~~~Rl~~~~~~-------------~~~~~l~~~~~~~-~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~ 304 (596)
=.+||.+.+|.-+.+-.++++.. .+|+. ....... -..++.++.||+.|.+. +..++.+
T Consensus 251 K~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i-~~el~~~~~~~~~~~~igdVrD~~~------~~~~~~~ 323 (588)
T COG1086 251 KTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLI-DMELREKFPELKLRFYIGDVRDRDR------VERAMEG 323 (588)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHH-HHHHHhhCCCcceEEEecccccHHH------HHHHHhc
Confidence 34677777777777777776653 12221 1111111 12678999999997654 8888888
Q ss_pred --ccEEEEcCccCC---hhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHH
Q psy5825 305 --IHVIIHAAASLR---FDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAH 379 (596)
Q Consensus 305 --vd~ViH~AA~v~---~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~ 379 (596)
+|+|||+||.-+ ...++.+.+.+||.||.|++++|.. .++++||++||.-+.-
T Consensus 324 ~kvd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~-~~V~~~V~iSTDKAV~--------------------- 381 (588)
T COG1086 324 HKVDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIK-NGVKKFVLISTDKAVN--------------------- 381 (588)
T ss_pred CCCceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHH-hCCCEEEEEecCcccC---------------------
Confidence 999999999754 3345677999999999999999999 5999999999976532
Q ss_pred HHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---c--CCCEEEecCCccccCCCCCccccCCCCCCcHHH
Q psy5825 380 VMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---Y--KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGA 454 (596)
Q Consensus 380 ~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---~--gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l 454 (596)
+.|.||.||.+||.++..+. . +..++++|+|||.|+.- ....+
T Consensus 382 ---------------------PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSrG-----------SViPl 429 (588)
T COG1086 382 ---------------------PTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSRG-----------SVIPL 429 (588)
T ss_pred ---------------------CchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCCC-----------CCHHH
Confidence 34789999999999999987 2 47899999999999742 12445
Q ss_pred HHH-HHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHH
Q psy5825 455 AAG-AALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533 (596)
Q Consensus 455 ~~~-~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el 533 (596)
|.. +..|. +.-..+++..+-|+-+.++|+.++.+.... .+|++|-+--| .++++.|+
T Consensus 430 Fk~QI~~Gg-plTvTdp~mtRyfMTI~EAv~LVlqA~a~~-------------------~gGeifvldMG--epvkI~dL 487 (588)
T COG1086 430 FKKQIAEGG-PLTVTDPDMTRFFMTIPEAVQLVLQAGAIA-------------------KGGEIFVLDMG--EPVKIIDL 487 (588)
T ss_pred HHHHHHcCC-CccccCCCceeEEEEHHHHHHHHHHHHhhc-------------------CCCcEEEEcCC--CCeEHHHH
Confidence 544 44553 222356888999999999999999887653 46899999998 89999999
Q ss_pred HHHHHHHcc
Q psy5825 534 MNSVQAAGK 542 (596)
Q Consensus 534 ~~~l~~~~~ 542 (596)
++.+.++.+
T Consensus 488 Ak~mi~l~g 496 (588)
T COG1086 488 AKAMIELAG 496 (588)
T ss_pred HHHHHHHhC
Confidence 999998886
|
|
| >PRK05865 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.72 E-value=9.4e-17 Score=183.57 Aligned_cols=163 Identities=15% Similarity=0.117 Sum_probs=123.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.+|++++. .+..+++++|+||||||.... .+.+|+.||.+|+++|.. .++++|||+||..
T Consensus 40 ~~v~~v~gDL~D~~------~l~~al~~vD~VVHlAa~~~~------~~~vNv~GT~nLLeAa~~-~gvkr~V~iSS~~- 105 (854)
T PRK05865 40 SSADFIAADIRDAT------AVESAMTGADVVAHCAWVRGR------NDHINIDGTANVLKAMAE-TGTGRIVFTSSGH- 105 (854)
T ss_pred cCceEEEeeCCCHH------HHHHHHhCCCEEEECCCcccc------hHHHHHHHHHHHHHHHHH-cCCCeEEEECCcH-
Confidence 35789999999654 478888899999999987542 468999999999999998 5788999999831
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
|..+|+++.. .+++++|+||++|||+
T Consensus 106 ----------------------------------------------------K~aaE~ll~~--~gl~~vILRp~~VYGP 131 (854)
T PRK05865 106 ----------------------------------------------------QPRVEQMLAD--CGLEWVAVRCALIFGR 131 (854)
T ss_pred ----------------------------------------------------HHHHHHHHHH--cCCCEEEEEeceEeCC
Confidence 6677888855 4899999999999997
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPP 516 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (596)
.. ..++..+. .......|++...++||||+|+|++++.++.... ..++
T Consensus 132 ~~-------------~~~i~~ll-~~~v~~~G~~~~~~dfIhVdDVA~Ai~~aL~~~~------------------~~gg 179 (854)
T PRK05865 132 NV-------------DNWVQRLF-ALPVLPAGYADRVVQVVHSDDAQRLLVRALLDTV------------------IDSG 179 (854)
T ss_pred Ch-------------HHHHHHHh-cCceeccCCCCceEeeeeHHHHHHHHHHHHhCCC------------------cCCC
Confidence 31 11222221 1111122445667899999999999998875421 1367
Q ss_pred eEEccCCCCCcccHHHHHHHHHHHc
Q psy5825 517 VYNLSISSSYPITWLEYMNSVQAAG 541 (596)
Q Consensus 517 vyni~~~~~~~vt~~el~~~l~~~~ 541 (596)
+|||+++ ..+|+.+|++.+....
T Consensus 180 vyNIgsg--~~~Si~EIae~l~~~~ 202 (854)
T PRK05865 180 PVNLAAP--GELTFRRIAAALGRPM 202 (854)
T ss_pred eEEEECC--CcccHHHHHHHHhhhh
Confidence 9999999 8899999999987643
|
|
| >PLN02260 probable rhamnose biosynthetic enzyme | Back alignment and domain information |
|---|
Probab=99.65 E-value=4.8e-15 Score=169.93 Aligned_cols=213 Identities=13% Similarity=0.059 Sum_probs=139.6
Q ss_pred EEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCC
Q psy5825 239 IYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLR 316 (596)
Q Consensus 239 V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~ 316 (596)
.-+||.+.+|.-+..-+..+.... ..|.+..+||+++. .+..++. ++|+||||||.+.
T Consensus 381 mkiLVtGa~G~iG~~l~~~L~~~g--------------~~v~~~~~~l~d~~------~v~~~i~~~~pd~Vih~Aa~~~ 440 (668)
T PLN02260 381 LKFLIYGRTGWIGGLLGKLCEKQG--------------IAYEYGKGRLEDRS------SLLADIRNVKPTHVFNAAGVTG 440 (668)
T ss_pred ceEEEECCCchHHHHHHHHHHhCC--------------CeEEeeccccccHH------HHHHHHHhhCCCEEEECCcccC
Confidence 346888877776655444332211 13445567877543 3555554 6899999999873
Q ss_pred ---h---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--------cccccccCCCCChHHHHHHHh
Q psy5825 317 ---F---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--------DIQEEFYPPLFSYEDLAHVMQ 382 (596)
Q Consensus 317 ---~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--------~i~E~~~~~~~~~~~~~~~~~ 382 (596)
. ......++.+|+.||.+|+++|.. .++ ++||+||.+||+... .+.|+.
T Consensus 441 ~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~-~g~-~~v~~Ss~~v~~~~~~~~~~~~~p~~E~~--------------- 503 (668)
T PLN02260 441 RPNVDWCESHKVETIRANVVGTLTLADVCRE-NGL-LMMNFATGCIFEYDAKHPEGSGIGFKEED--------------- 503 (668)
T ss_pred CCCCChHHhCHHHHHHHHhHHHHHHHHHHHH-cCC-eEEEEcccceecCCcccccccCCCCCcCC---------------
Confidence 2 124566889999999999999999 466 578889999986421 111110
Q ss_pred cCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhcc
Q psy5825 383 TTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGL 462 (596)
Q Consensus 383 ~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~ 462 (596)
.| .. ..+.|+.||+++|+++..+. .+.++|+.++||... .++..|+..++.+.
T Consensus 504 ----------~~---~~-~~~~Yg~sK~~~E~~~~~~~---~~~~~r~~~~~~~~~----------~~~~nfv~~~~~~~ 556 (668)
T PLN02260 504 ----------KP---NF-TGSFYSKTKAMVEELLREYD---NVCTLRVRMPISSDL----------SNPRNFITKISRYN 556 (668)
T ss_pred ----------CC---CC-CCChhhHHHHHHHHHHHhhh---hheEEEEEEecccCC----------CCccHHHHHHhccc
Confidence 01 00 22679999999999998763 567888888887421 11223444444322
Q ss_pred ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 463 IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 463 ~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
. .+.. ..+...+|+++.+++.++... .+++||++++ ..++|.||+..|.+.++
T Consensus 557 ~-~~~v----p~~~~~~~~~~~~~~~l~~~~--------------------~~giyni~~~--~~~s~~e~a~~i~~~~~ 609 (668)
T PLN02260 557 K-VVNI----PNSMTVLDELLPISIEMAKRN--------------------LRGIWNFTNP--GVVSHNEILEMYKDYID 609 (668)
T ss_pred e-eecc----CCCceehhhHHHHHHHHHHhC--------------------CCceEEecCC--CcCcHHHHHHHHHHhcC
Confidence 1 1111 134677899998887777421 2579999999 78999999999988663
|
|
| >PRK12320 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.9e-14 Score=159.11 Aligned_cols=165 Identities=13% Similarity=0.098 Sum_probs=117.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
..++++.+|++++. +..++.++|+|||||+..... ...+|+.||.||+++|.. .++ +|||+||++
T Consensus 40 ~~ve~v~~Dl~d~~-------l~~al~~~D~VIHLAa~~~~~-----~~~vNv~Gt~nLleAA~~-~Gv-RiV~~SS~~- 104 (699)
T PRK12320 40 PRVDYVCASLRNPV-------LQELAGEADAVIHLAPVDTSA-----PGGVGITGLAHVANAAAR-AGA-RLLFVSQAA- 104 (699)
T ss_pred CCceEEEccCCCHH-------HHHHhcCCCEEEEcCccCccc-----hhhHHHHHHHHHHHHHHH-cCC-eEEEEECCC-
Confidence 46889999998762 566778999999999874211 235899999999999998 466 799999863
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
|.. ..|. .+|.++.. .+++++|+|+++|||+
T Consensus 105 -G~~------------------------------------------~~~~----~aE~ll~~--~~~p~~ILR~~nVYGp 135 (699)
T PRK12320 105 -GRP------------------------------------------ELYR----QAETLVST--GWAPSLVIRIAPPVGR 135 (699)
T ss_pred -CCC------------------------------------------cccc----HHHHHHHh--cCCCEEEEeCceecCC
Confidence 320 0132 46777655 3689999999999997
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPP 516 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (596)
...+ ....++..++...+ ....+.+||||||+++++.++... .++
T Consensus 136 ~~~~---------~~~r~I~~~l~~~~------~~~pI~vIyVdDvv~alv~al~~~--------------------~~G 180 (699)
T PRK12320 136 QLDW---------MVCRTVATLLRSKV------SARPIRVLHLDDLVRFLVLALNTD--------------------RNG 180 (699)
T ss_pred CCcc---------cHhHHHHHHHHHHH------cCCceEEEEHHHHHHHHHHHHhCC--------------------CCC
Confidence 4321 11233333332211 123445799999999999888531 234
Q ss_pred eEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 517 VYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 517 vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+|||+++ ..+|+.++++.+.....
T Consensus 181 iyNIG~~--~~~Si~el~~~i~~~~p 204 (699)
T PRK12320 181 VVDLATP--DTTNVVTAWRLLRSVDP 204 (699)
T ss_pred EEEEeCC--CeeEHHHHHHHHHHhCC
Confidence 9999999 89999999999877643
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=99.54 E-value=3.7e-14 Score=145.50 Aligned_cols=168 Identities=10% Similarity=0.035 Sum_probs=115.1
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh------cc-ccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEE
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ------HH-IHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILH 350 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~------~~-vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~ 350 (596)
.+.++.+|+.++.. +..++ .+ +|.||||++.... .+..+.+++++|.. .++++|||
T Consensus 40 ~~~~~~~d~~d~~~------l~~a~~~~~~~~g~~d~v~~~~~~~~~----------~~~~~~~~i~aa~~-~gv~~~V~ 102 (285)
T TIGR03649 40 NEKHVKFDWLDEDT------WDNPFSSDDGMEPEISAVYLVAPPIPD----------LAPPMIKFIDFARS-KGVRRFVL 102 (285)
T ss_pred CCccccccCCCHHH------HHHHHhcccCcCCceeEEEEeCCCCCC----------hhHHHHHHHHHHHH-cCCCEEEE
Confidence 46677899987654 77777 57 9999999875421 12345789999998 58999999
Q ss_pred ecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecC
Q psy5825 351 VSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRP 430 (596)
Q Consensus 351 vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp 430 (596)
+||+.++.... .+...|.++... .|++++|+||
T Consensus 103 ~Ss~~~~~~~~----------------------------------------------~~~~~~~~l~~~-~gi~~tilRp 135 (285)
T TIGR03649 103 LSASIIEKGGP----------------------------------------------AMGQVHAHLDSL-GGVEYTVLRP 135 (285)
T ss_pred eeccccCCCCc----------------------------------------------hHHHHHHHHHhc-cCCCEEEEec
Confidence 99976532100 011123333322 4899999999
Q ss_pred CccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCC
Q psy5825 431 SIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPI 510 (596)
Q Consensus 431 ~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~ 510 (596)
+++++....+ ++...+......+.+.++..++||+++|+|++++.++..+.
T Consensus 136 ~~f~~~~~~~-------------~~~~~~~~~~~~~~~~g~~~~~~v~~~Dva~~~~~~l~~~~---------------- 186 (285)
T TIGR03649 136 TWFMENFSEE-------------FHVEAIRKENKIYSATGDGKIPFVSADDIARVAYRALTDKV---------------- 186 (285)
T ss_pred cHHhhhhccc-------------ccccccccCCeEEecCCCCccCcccHHHHHHHHHHHhcCCC----------------
Confidence 9887642110 00011111111233456788999999999999998886532
Q ss_pred CCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 511 PRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 511 ~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+.+|+++++ ..+|+.|++..+.+.++
T Consensus 187 --~~~~~~~l~g~--~~~s~~eia~~l~~~~g 214 (285)
T TIGR03649 187 --APNTDYVVLGP--ELLTYDDVAEILSRVLG 214 (285)
T ss_pred --cCCCeEEeeCC--ccCCHHHHHHHHHHHhC
Confidence 24679999998 89999999999999988
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >KOG2865|consensus | Back alignment and domain information |
|---|
Probab=99.51 E-value=7.6e-14 Score=136.13 Aligned_cols=227 Identities=13% Similarity=0.099 Sum_probs=154.3
Q ss_pred CcCeEEEEeCCCCcccHHHHHHHHhhhh--h--------HHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhcc
Q psy5825 235 EVGGIYILLRSKKNKTVQERLAEQFKDE--L--------FDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHH 304 (596)
Q Consensus 235 ~v~~V~~LvR~~~~~~~~~Rl~~~~~~~--~--------~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~ 304 (596)
.+.-|++-|=+..|.-++--++++...+ + ++......-..+ ..|-++.-|+.| ++.++.+.+.
T Consensus 58 S~sGiVaTVFGAtGFlGryvvnklak~GSQviiPyR~d~~~~r~lkvmGdL-GQvl~~~fd~~D------edSIr~vvk~ 130 (391)
T KOG2865|consen 58 SVSGIVATVFGATGFLGRYVVNKLAKMGSQVIIPYRGDEYDPRHLKVMGDL-GQVLFMKFDLRD------EDSIRAVVKH 130 (391)
T ss_pred cccceEEEEecccccccHHHHHHHhhcCCeEEEeccCCccchhheeecccc-cceeeeccCCCC------HHHHHHHHHh
Confidence 3445667777777776665555544321 1 000000000112 334444444444 4458899999
Q ss_pred ccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcC
Q psy5825 305 IHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTT 384 (596)
Q Consensus 305 vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~ 384 (596)
..+|||+-+.---..++ .+.++|+.|...|...|.+ .++.+|||+|...+.-.
T Consensus 131 sNVVINLIGrd~eTknf-~f~Dvn~~~aerlAricke-~GVerfIhvS~Lganv~------------------------- 183 (391)
T KOG2865|consen 131 SNVVINLIGRDYETKNF-SFEDVNVHIAERLARICKE-AGVERFIHVSCLGANVK------------------------- 183 (391)
T ss_pred CcEEEEeeccccccCCc-ccccccchHHHHHHHHHHh-hChhheeehhhcccccc-------------------------
Confidence 99999998852111222 3778999999999999999 69999999999874311
Q ss_pred ChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccce
Q psy5825 385 NQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIH 464 (596)
Q Consensus 385 ~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~ 464 (596)
.++-|-.||+++|..|+++++ ..+|+||+.|||.-. .|...+..+|.- .|.++
T Consensus 184 ----------------s~Sr~LrsK~~gE~aVrdafP--eAtIirPa~iyG~eD--------rfln~ya~~~rk-~~~~p 236 (391)
T KOG2865|consen 184 ----------------SPSRMLRSKAAGEEAVRDAFP--EATIIRPADIYGTED--------RFLNYYASFWRK-FGFLP 236 (391)
T ss_pred ----------------ChHHHHHhhhhhHHHHHhhCC--cceeechhhhcccch--------hHHHHHHHHHHh-cCcee
Confidence 124599999999999999863 479999999999643 222223333332 23444
Q ss_pred EeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 465 TFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 465 ~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+.......-.-|+|-|||.+|+.|+..+. ..|.+|.++++ ....+.+|++++.....
T Consensus 237 L~~~GekT~K~PVyV~DVaa~IvnAvkDp~------------------s~Gktye~vGP--~~yql~eLvd~my~~~~ 294 (391)
T KOG2865|consen 237 LIGKGEKTVKQPVYVVDVAAAIVNAVKDPD------------------SMGKTYEFVGP--DRYQLSELVDIMYDMAR 294 (391)
T ss_pred eecCCcceeeccEEEehHHHHHHHhccCcc------------------ccCceeeecCC--chhhHHHHHHHHHHHHh
Confidence 333444567788999999999999997764 36899999999 89999999999988766
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.50 E-value=1.9e-12 Score=132.13 Aligned_cols=190 Identities=15% Similarity=0.072 Sum_probs=123.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|+++... +..++ ..+|+||||||..... ..+...+.+|+.|+.+|++++..
T Consensus 48 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 121 (276)
T PRK06482 48 DRLWVLQLDVTDSAA------VRAVVDRAFAALGRIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPH 121 (276)
T ss_pred CceEEEEccCCCHHH------HHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 578899999997653 44433 3579999999976432 23456888999999999999832
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||....... + ..+.|+.||++.|.++..+
T Consensus 122 ~~~~~~~~iv~~sS~~~~~~~--------~-------------------------------~~~~Y~~sK~a~~~~~~~l 162 (276)
T PRK06482 122 LRRQGGGRIVQVSSEGGQIAY--------P-------------------------------GFSLYHATKWGIEGFVEAV 162 (276)
T ss_pred HHhcCCCEEEEEcCcccccCC--------C-------------------------------CCchhHHHHHHHHHHHHHH
Confidence 1456799999997543210 0 1246999999999999876
Q ss_pred h-----cCCCEEEecCCcc---ccCCCCCccccCCCCC-CcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 420 L-----YKLPLAMVRPSIV---VSTWKEPIVGWSNNLY-GPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V---~G~~~~p~~G~~~~~~-~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
. .|++++++|||.+ ||..... .++...+. .+...+..... .+... -+.+++|++++++.++
T Consensus 163 ~~~~~~~gi~v~~v~pg~~~t~~~~~~~~-~~~~~~~~~~~~~~~~~~~~--------~~~~~-~~~d~~~~~~a~~~~~ 232 (276)
T PRK06482 163 AQEVAPFGIEFTIVEPGPARTNFGAGLDR-GAPLDAYDDTPVGDLRRALA--------DGSFA-IPGDPQKMVQAMIASA 232 (276)
T ss_pred HHHhhccCcEEEEEeCCccccCCcccccc-cCCCccccchhhHHHHHHHh--------hccCC-CCCCHHHHHHHHHHHH
Confidence 5 5899999999988 4432211 01111000 01111111111 11111 1467899999999998
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
... ..+..||++++ ..+++.+++..+.....
T Consensus 233 ~~~-------------------~~~~~~~~g~~--~~~~~~~~~~~~~~~~~ 263 (276)
T PRK06482 233 DQT-------------------PAPRRLTLGSD--AYASIRAALSERLAALE 263 (276)
T ss_pred cCC-------------------CCCeEEecChH--HHHHHHHHHHHHHHHHH
Confidence 543 13567999998 77777777776666554
|
|
| >KOG1431|consensus | Back alignment and domain information |
|---|
Probab=99.47 E-value=2.5e-12 Score=121.71 Aligned_cols=200 Identities=17% Similarity=0.086 Sum_probs=147.4
Q ss_pred HHHHHHHhcc--ccEEEEcCccCCh---hhhH-HHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--ccccc
Q psy5825 295 SHDQQFIQHH--IHVIIHAAASLRF---DELI-QDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEE 366 (596)
Q Consensus 295 ~~~~~~l~~~--vd~ViH~AA~v~~---~~~~-~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~ 366 (596)
.++.+.++.. ..+|||+||.|.. +..| .+++..|+.---|+|..|-+ .+++++|++-|..+|.... +|+|.
T Consensus 44 ~a~t~~lF~~ekPthVIhlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e-~gv~K~vsclStCIfPdkt~yPIdEt 122 (315)
T KOG1431|consen 44 LADTRALFESEKPTHVIHLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHE-HGVKKVVSCLSTCIFPDKTSYPIDET 122 (315)
T ss_pred hHHHHHHHhccCCceeeehHhhhcchhhcCCCchHHHhhcceechhHHHHHHH-hchhhhhhhcceeecCCCCCCCCCHH
Confidence 3457777765 5899999999852 2222 35899999999999999999 6899999999999987633 33332
Q ss_pred ccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCcccc
Q psy5825 367 FYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGW 444 (596)
Q Consensus 367 ~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~ 444 (596)
.+.. .|+ .. ..-+|+..|.++.-.-+.|+ +|..++.+-|.+|||+..+-.+-
T Consensus 123 ---------------------mvh~-gpp--hp-sN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphDNfnpe- 176 (315)
T KOG1431|consen 123 ---------------------MVHN-GPP--HP-SNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHDNFNPE- 176 (315)
T ss_pred ---------------------Hhcc-CCC--CC-CchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCCCCCcc-
Confidence 1111 111 01 22479999999988888777 99999999999999997643321
Q ss_pred CCCCCCcHHHHHHHH----hcc-ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEE
Q psy5825 445 SNNLYGPGGAAAGAA----LGL-IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYN 519 (596)
Q Consensus 445 ~~~~~~~~~l~~~~~----~g~-~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyn 519 (596)
+-....+|+..+- .|. ...++|.+...+.|||+||+|++++.++..- .+.+-.+
T Consensus 177 --~sHVlPali~r~h~ak~~gtd~~~VwGsG~PlRqFiys~DLA~l~i~vlr~Y-------------------~~vEpii 235 (315)
T KOG1431|consen 177 --NSHVLPALIHRFHEAKRNGTDELTVWGSGSPLRQFIYSDDLADLFIWVLREY-------------------EGVEPII 235 (315)
T ss_pred --cccchHHHHHHHHHHHhcCCceEEEecCCChHHHHhhHhHHHHHHHHHHHhh-------------------cCccceE
Confidence 2233345555432 232 3467899999999999999999999998653 2456778
Q ss_pred ccCCCCCcccHHHHHHHHHHHcc
Q psy5825 520 LSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 520 i~~~~~~~vt~~el~~~l~~~~~ 542 (596)
++.++...+|+.|+++++.++++
T Consensus 236 ls~ge~~EVtI~e~aeaV~ea~~ 258 (315)
T KOG1431|consen 236 LSVGESDEVTIREAAEAVVEAVD 258 (315)
T ss_pred eccCccceeEHHHHHHHHHHHhC
Confidence 88886679999999999999876
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=99.46 E-value=4.6e-12 Score=124.35 Aligned_cols=176 Identities=17% Similarity=0.138 Sum_probs=121.0
Q ss_pred cccEEEEcCccCC----hhhhH-HHHHHHHHHHHHHHHHHHHhc-CCCceEEEecCcccccCCc--cccccccCCCCChH
Q psy5825 304 HIHVIIHAAASLR----FDELI-QDAFTLNIQATRELLDLATRC-SQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYE 375 (596)
Q Consensus 304 ~vd~ViH~AA~v~----~~~~~-~~~~~~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~ 375 (596)
++|+|||+||..= |+... +.+++.-+.+|..|+++...+ ...+.||-.|.++.||+.. .++|.. ++..+
T Consensus 56 ~~DavINLAG~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~~~~P~~~isaSAvGyYG~~~~~~~tE~~-~~g~~-- 132 (297)
T COG1090 56 GIDAVINLAGEPIAERRWTEKQKEEIRQSRINTTEKLVELIAASETKPKVLISASAVGYYGHSGDRVVTEES-PPGDD-- 132 (297)
T ss_pred CCCEEEECCCCccccccCCHHHHHHHHHHHhHHHHHHHHHHHhccCCCcEEEecceEEEecCCCceeeecCC-CCCCC--
Confidence 7999999999742 44444 347888999999999998742 4566778888888899765 344431 11000
Q ss_pred HHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCCCCCCcHHH
Q psy5825 376 DLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGA 454 (596)
Q Consensus 376 ~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l 454 (596)
| -++.=..=|.....+. .|.+++++|.|+|.|+. .|.. ..|
T Consensus 133 -F---------------------------la~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~----GGaL------~~m 174 (297)
T COG1090 133 -F---------------------------LAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPD----GGAL------GKM 174 (297)
T ss_pred -h---------------------------HHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCC----Ccch------hhh
Confidence 0 0000011133444444 68999999999999963 2211 122
Q ss_pred HHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHH
Q psy5825 455 AAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYM 534 (596)
Q Consensus 455 ~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~ 534 (596)
+..+..| +.-..|++.+++.|||+||++++|+.++.+.. ..+.||++.+ +||+..+|.
T Consensus 175 ~~~fk~g-lGG~~GsGrQ~~SWIhieD~v~~I~fll~~~~-------------------lsGp~N~taP--~PV~~~~F~ 232 (297)
T COG1090 175 LPLFKLG-LGGKLGSGRQWFSWIHIEDLVNAILFLLENEQ-------------------LSGPFNLTAP--NPVRNKEFA 232 (297)
T ss_pred cchhhhc-cCCccCCCCceeeeeeHHHHHHHHHHHHhCcC-------------------CCCcccccCC--CcCcHHHHH
Confidence 2222222 22335889999999999999999999998743 3568999999 999999999
Q ss_pred HHHHHHcc
Q psy5825 535 NSVQAAGK 542 (596)
Q Consensus 535 ~~l~~~~~ 542 (596)
..|.+.+.
T Consensus 233 ~al~r~l~ 240 (297)
T COG1090 233 HALGRALH 240 (297)
T ss_pred HHHHHHhC
Confidence 99999988
|
|
| >COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=99.41 E-value=1.4e-12 Score=127.78 Aligned_cols=205 Identities=17% Similarity=0.094 Sum_probs=146.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCC----hhhhHHHHHHHHHHHHHHHHHHHHhcCC-CceEE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLR----FDELIQDAFTLNIQATRELLDLATRCSQ-LKAIL 349 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~----~~~~~~~~~~~NV~GT~~LL~~a~~~~~-vkrfV 349 (596)
.+++++.|||+|... +..+++. .|.|+|+||+.. |..+. ....++..||.+||++.+.... -.+|.
T Consensus 55 ~~l~l~~gDLtD~~~------l~r~l~~v~PdEIYNLaAQS~V~vSFe~P~-~T~~~~~iGtlrlLEaiR~~~~~~~rfY 127 (345)
T COG1089 55 PRLHLHYGDLTDSSN------LLRILEEVQPDEIYNLAAQSHVGVSFEQPE-YTADVDAIGTLRLLEAIRILGEKKTRFY 127 (345)
T ss_pred ceeEEEeccccchHH------HHHHHHhcCchhheeccccccccccccCcc-eeeeechhHHHHHHHHHHHhCCcccEEE
Confidence 569999999997654 6777765 589999999854 44332 3567899999999999998543 46999
Q ss_pred EecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEE
Q psy5825 350 HVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAM 427 (596)
Q Consensus 350 ~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~I 427 (596)
++||...||....+.. ...+|-. +.++|+.+|..|-.+...|. +|+-++.
T Consensus 128 QAStSE~fG~v~~~pq------------------------~E~TPFy----PrSPYAvAKlYa~W~tvNYResYgl~Acn 179 (345)
T COG1089 128 QASTSELYGLVQEIPQ------------------------KETTPFY----PRSPYAVAKLYAYWITVNYRESYGLFACN 179 (345)
T ss_pred ecccHHhhcCcccCcc------------------------ccCCCCC----CCCHHHHHHHHHHheeeehHhhcCceeec
Confidence 9999999996442110 0011110 23789999999999998888 8887775
Q ss_pred ecCCccccCCCCCccccCCCCCCcHHHHHHHHhccce-EeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q psy5825 428 VRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIH-TFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASL 506 (596)
Q Consensus 428 lRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~-~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~ 506 (596)
=.+.+--+|. .|..--..-++..+..+..|... .+.|+.+..+||-|..|.+.+|.+++...
T Consensus 180 GILFNHESP~----Rge~FVTRKIt~ava~Ik~G~q~~l~lGNldAkRDWG~A~DYVe~mwlmLQq~------------- 242 (345)
T COG1089 180 GILFNHESPL----RGETFVTRKITRAVARIKLGLQDKLYLGNLDAKRDWGHAKDYVEAMWLMLQQE------------- 242 (345)
T ss_pred ceeecCCCCC----CccceehHHHHHHHHHHHccccceEEeccccccccccchHHHHHHHHHHHccC-------------
Confidence 4444444432 22110001123344445566543 35689999999999999999998888653
Q ss_pred CCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 507 VAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 507 ~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.++.|.++.+ ...|+++|+.+..+..+
T Consensus 243 -------~PddyViATg--~t~sVrefv~~Af~~~g 269 (345)
T COG1089 243 -------EPDDYVIATG--ETHSVREFVELAFEMVG 269 (345)
T ss_pred -------CCCceEEecC--ceeeHHHHHHHHHHHcC
Confidence 3678999999 88899999999988777
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.3e-12 Score=126.62 Aligned_cols=187 Identities=12% Similarity=0.104 Sum_probs=122.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-ccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-HHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
.+++++.||+++.. ..+...+ .++|+|||+++......+ ...+.+|+.|+.+|+++|.. .++++|||+||++
T Consensus 62 ~~~~~~~~Dl~d~~-----~~l~~~~~~~~d~vi~~~g~~~~~~~-~~~~~~n~~~~~~ll~a~~~-~~~~~iV~iSS~~ 134 (251)
T PLN00141 62 PSLQIVRADVTEGS-----DKLVEAIGDDSDAVICATGFRRSFDP-FAPWKVDNFGTVNLVEACRK-AGVTRFILVSSIL 134 (251)
T ss_pred CceEEEEeeCCCCH-----HHHHHHhhcCCCEEEECCCCCcCCCC-CCceeeehHHHHHHHHHHHH-cCCCEEEEEcccc
Confidence 46899999999731 2355555 689999999886432121 22357899999999999998 5789999999999
Q ss_pred cccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCcccc
Q psy5825 356 THSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVS 435 (596)
Q Consensus 356 v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G 435 (596)
+||.... .. ..+.. .... ....|..+|+.+|.++.. .|++++++|||++++
T Consensus 135 v~g~~~~---~~----~~~~~-------------~~~~-------~~~~~~~~k~~~e~~l~~--~gi~~~iirpg~~~~ 185 (251)
T PLN00141 135 VNGAAMG---QI----LNPAY-------------IFLN-------LFGLTLVAKLQAEKYIRK--SGINYTIVRPGGLTN 185 (251)
T ss_pred ccCCCcc---cc----cCcch-------------hHHH-------HHHHHHHHHHHHHHHHHh--cCCcEEEEECCCccC
Confidence 9875320 00 00000 0000 012356789999998875 489999999999987
Q ss_pred CCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCC
Q psy5825 436 TWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDP 515 (596)
Q Consensus 436 ~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (596)
.... | .+...++ ......+|+++|||++++.++..+.. .+
T Consensus 186 ~~~~---~------------------~~~~~~~-~~~~~~~i~~~dvA~~~~~~~~~~~~------------------~~ 225 (251)
T PLN00141 186 DPPT---G------------------NIVMEPE-DTLYEGSISRDQVAEVAVEALLCPES------------------SY 225 (251)
T ss_pred CCCC---c------------------eEEECCC-CccccCcccHHHHHHHHHHHhcChhh------------------cC
Confidence 5211 1 0000111 11223579999999999999876432 35
Q ss_pred CeEEccCCCCC-cccHHHHHHHHHH
Q psy5825 516 PVYNLSISSSY-PITWLEYMNSVQA 539 (596)
Q Consensus 516 ~vyni~~~~~~-~vt~~el~~~l~~ 539 (596)
.+|.+.+...+ ..+|.+|+..+.+
T Consensus 226 ~~~~~~~~~~~~~~~~~~~~~~~~~ 250 (251)
T PLN00141 226 KVVEIVARADAPKRSYKDLFASIKQ 250 (251)
T ss_pred cEEEEecCCCCCchhHHHHHHHhhc
Confidence 67877764333 4789999887753
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.40 E-value=6.8e-12 Score=126.62 Aligned_cols=177 Identities=8% Similarity=0.024 Sum_probs=115.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHH----HHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQA----TRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~G----T~~LL~~ 338 (596)
.++.++.+|++++.. +..++. .+|+|||||+.... ...+..++.+|+.| +.+++.+
T Consensus 56 ~~~~~~~~Dl~~~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~ 129 (262)
T PRK13394 56 GKAIGVAMDVTNEDA------VNAGIDKVAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKH 129 (262)
T ss_pred ceEEEEECCCCCHHH------HHHHHHHHHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 468889999997653 444433 48999999997532 12345678899999 6677777
Q ss_pred H-HhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 339 A-TRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 339 a-~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
+ .. .+..+||++||.+.+.... ..+.|+.+|+..+.++.
T Consensus 130 ~~~~-~~~~~iv~~ss~~~~~~~~---------------------------------------~~~~y~~sk~a~~~~~~ 169 (262)
T PRK13394 130 MYKD-DRGGVVIYMGSVHSHEASP---------------------------------------LKSAYVTAKHGLLGLAR 169 (262)
T ss_pred HHhh-cCCcEEEEEcchhhcCCCC---------------------------------------CCcccHHHHHHHHHHHH
Confidence 7 44 4678999999975442110 12469999999998887
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCc-cccCCCCC-CcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPI-VGWSNNLY-GPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~-~G~~~~~~-~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
.++ .++.++++|||.|+++..... +....... ....++.. +++.+....+|++++|++++++.++
T Consensus 170 ~la~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~~dva~a~~~l~ 241 (262)
T PRK13394 170 VLAKEGAKHNVRSHVVCPGFVRTPLVDKQIPEQAKELGISEEEVVKK--------VMLGKTVDGVFTTVEDVAQTVLFLS 241 (262)
T ss_pred HHHHHhhhcCeEEEEEeeCcccchhhhhhhHhhhhccCCChHHHHHH--------HHhcCCCCCCCCCHHHHHHHHHHHc
Confidence 765 589999999999998743110 00000000 00011111 1222344578999999999999988
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|.+|++.++
T Consensus 242 ~~~~~~----------------~~g~~~~~~~g 258 (262)
T PRK13394 242 SFPSAA----------------LTGQSFVVSHG 258 (262)
T ss_pred CccccC----------------CcCCEEeeCCc
Confidence 643221 35789999876
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=99.37 E-value=1.6e-11 Score=123.25 Aligned_cols=183 Identities=10% Similarity=0.038 Sum_probs=115.4
Q ss_pred CcEEEEEeccCCCCCCCCH--HHHHHHhccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh---cCC
Q psy5825 277 RKVHIISGDISQPSLGISS--HDQQFIQHHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR---CSQ 344 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~--~~~~~l~~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~---~~~ 344 (596)
.++.++.+|+.++.. +.. ..+...+.++|+|||+|+.... ...+..++.+|+.|+.++++.+.. ..+
T Consensus 50 ~~~~~~~~D~~~~~~-~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 128 (255)
T TIGR01963 50 GSVIYLVADVTKEDE-IADMIAAAAAEFGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMKKQG 128 (255)
T ss_pred CceEEEECCCCCHHH-HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcC
Confidence 568999999997541 000 0122223468999999997542 123456788999999988888742 145
Q ss_pred CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----
Q psy5825 345 LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---- 420 (596)
Q Consensus 345 vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---- 420 (596)
+.+|||+||.+.+.... ....|+.+|.+.+.++..++
T Consensus 129 ~~~~v~~ss~~~~~~~~---------------------------------------~~~~y~~sk~a~~~~~~~~~~~~~ 169 (255)
T TIGR01963 129 WGRIINIASAHGLVASP---------------------------------------FKSAYVAAKHGLIGLTKVLALEVA 169 (255)
T ss_pred CeEEEEEcchhhcCCCC---------------------------------------CCchhHHHHHHHHHHHHHHHHHhh
Confidence 78999999986554210 12459999999998887654
Q ss_pred -cCCCEEEecCCccccCCCCCc-c-ccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 421 -YKLPLAMVRPSIVVSTWKEPI-V-GWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 421 -~gl~~~IlRp~~V~G~~~~p~-~-G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
.+++++++||+.|+|+..... + .+.. .......+ ..+. ...+....++++++|+|++++.++......
T Consensus 170 ~~~i~v~~i~pg~v~~~~~~~~~~~~~~~-~~~~~~~~---~~~~----~~~~~~~~~~~~~~d~a~~~~~~~~~~~~~- 240 (255)
T TIGR01963 170 AHGITVNAICPGYVRTPLVEKQIADQAKT-RGIPEEQV---IREV----MLPGQPTKRFVTVDEVAETALFLASDAAAG- 240 (255)
T ss_pred hcCeEEEEEecCccccHHHHHHHHhhhcc-cCCCchHH---HHHH----HHccCccccCcCHHHHHHHHHHHcCccccC-
Confidence 489999999999988642110 0 0000 00000000 0000 112334568999999999999988653211
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..+++||+.++
T Consensus 241 ---------------~~g~~~~~~~g 251 (255)
T TIGR01963 241 ---------------ITGQAIVLDGG 251 (255)
T ss_pred ---------------ccceEEEEcCc
Confidence 25789999887
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.34 E-value=4.4e-11 Score=122.03 Aligned_cols=190 Identities=11% Similarity=0.060 Sum_probs=121.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. .+..++ ..+|+||||||..... ..+..++.+|+.|+.++++.+..
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 122 (275)
T PRK08263 49 DRLLPLALDVTDRA------AVFAAVETAVEHFGRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPY 122 (275)
T ss_pred CCeeEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46888999998754 244333 3579999999976431 34567889999999888888632
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||.+++.... ....|+.||+..+.++..+
T Consensus 123 ~~~~~~~~iv~vsS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~l 163 (275)
T PRK08263 123 LREQRSGHIIQISSIGGISAFP---------------------------------------MSGIYHASKWALEGMSEAL 163 (275)
T ss_pred HHhcCCCEEEEEcChhhcCCCC---------------------------------------CccHHHHHHHHHHHHHHHH
Confidence 13567999999987764311 1245999999998888665
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCcccc-ccHHHHHHHHHHHHHhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDL-IPVDVATNMMLGVVWKT 493 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~-ipVDdva~aii~~~~~~ 493 (596)
+ .|++++++|||.+..+...+.............+...+.. ......+ +.++|+|++++.++...
T Consensus 164 a~e~~~~gi~v~~v~Pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~p~dva~~~~~l~~~~ 234 (275)
T PRK08263 164 AQEVAEFGIKVTLVEPGGYSTDWAGTSAKRATPLDAYDTLREELAE---------QWSERSVDGDPEAAAEALLKLVDAE 234 (275)
T ss_pred HHHhhhhCcEEEEEecCCccCCccccccccCCCchhhhhHHHHHHH---------HHHhccCCCCHHHHHHHHHHHHcCC
Confidence 4 6899999999998765432100000000000011111111 0111234 88999999999998754
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHH
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAA 540 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~ 540 (596)
.. .+.+|+.+.+ ..+++.++.+.+.++
T Consensus 235 ~~------------------~~~~~~~~~~--~~~~~~~~~~~~~~~ 261 (275)
T PRK08263 235 NP------------------PLRLFLGSGV--LDLAKADYERRLATW 261 (275)
T ss_pred CC------------------CeEEEeCchH--HHHHHHHHHHHHHHH
Confidence 21 3445554444 678888888888774
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=99.32 E-value=7.1e-11 Score=118.17 Aligned_cols=170 Identities=13% Similarity=0.022 Sum_probs=115.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh----h---hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF----D---ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~----~---~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
..+.++.+|++++. .+..+++ .+|+|||+|+.... . ..+...+.+|+.|+.++++++..
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (251)
T PRK12826 55 GKARARQVDVRDRA------ALKAAVAAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPA 128 (251)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45889999999654 3555543 68999999988653 1 23456889999999999998852
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+|||+||...++... . ....|+.+|..++.++..+
T Consensus 129 ~~~~~~~~ii~~ss~~~~~~~~-------------------------------------~-~~~~y~~sK~a~~~~~~~~ 170 (251)
T PRK12826 129 LIRAGGGRIVLTSSVAGPRVGY-------------------------------------P-GLAHYAASKAGLVGFTRAL 170 (251)
T ss_pred HHHcCCcEEEEEechHhhccCC-------------------------------------C-CccHHHHHHHHHHHHHHHH
Confidence 13567899999987652100 0 1245999999999999886
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
. .+++++++|||.++|+...+. ....+ ....... .+. ..+++++|+|++++.++....
T Consensus 171 ~~~~~~~~i~~~~i~pg~~~~~~~~~~--------~~~~~-~~~~~~~---~~~-----~~~~~~~dva~~~~~l~~~~~ 233 (251)
T PRK12826 171 ALELAARNITVNSVHPGGVDTPMAGNL--------GDAQW-AEAIAAA---IPL-----GRLGEPEDIAAAVLFLASDEA 233 (251)
T ss_pred HHHHHHcCeEEEEEeeCCCCcchhhhc--------CchHH-HHHHHhc---CCC-----CCCcCHHHHHHHHHHHhCccc
Confidence 5 489999999999999743211 11111 1111111 111 258999999999988764432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.++
T Consensus 234 ~~----------------~~g~~~~~~~g 246 (251)
T PRK12826 234 RY----------------ITGQTLPVDGG 246 (251)
T ss_pred cC----------------cCCcEEEECCC
Confidence 11 25889999886
|
|
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=7.5e-11 Score=117.57 Aligned_cols=168 Identities=12% Similarity=0.086 Sum_probs=116.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. .+..++ ..+|+|||+||..... ..+...+.+|+.|+.+|++.+..
T Consensus 56 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (249)
T PRK12825 56 RRAQAVQADVTDKA------ALEAAVAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPP 129 (249)
T ss_pred CceEEEECCcCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56899999999754 244444 3579999999965322 23456789999999999999842
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..++.+||++||..++.... ....|+.+|...+.++..+
T Consensus 130 ~~~~~~~~~i~~SS~~~~~~~~---------------------------------------~~~~y~~sK~~~~~~~~~~ 170 (249)
T PRK12825 130 MRKQRGGRIVNISSVAGLPGWP---------------------------------------GRSNYAAAKAGLVGLTKAL 170 (249)
T ss_pred HHhcCCCEEEEECccccCCCCC---------------------------------------CchHHHHHHHHHHHHHHHH
Confidence 14578999999988764210 1245999999999988766
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .+++++++|||.++|+...+. . ...++.. .... ....+++++|++++++.++....
T Consensus 171 ~~~~~~~~i~~~~i~pg~~~~~~~~~~-------~-~~~~~~~-----~~~~-----~~~~~~~~~dva~~~~~~~~~~~ 232 (249)
T PRK12825 171 ARELAEYGITVNMVAPGDIDTDMKEAT-------I-EEAREAK-----DAET-----PLGRSGTPEDIARAVAFLCSDAS 232 (249)
T ss_pred HHHHhhcCeEEEEEEECCccCCccccc-------c-chhHHhh-----hccC-----CCCCCcCHHHHHHHHHHHhCccc
Confidence 5 589999999999999753211 1 1111110 0001 12238999999999988885432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|+++++
T Consensus 233 ~~----------------~~g~~~~i~~g 245 (249)
T PRK12825 233 DY----------------ITGQVIEVTGG 245 (249)
T ss_pred cC----------------cCCCEEEeCCC
Confidence 11 35899999987
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.31 E-value=1.5e-10 Score=115.73 Aligned_cols=168 Identities=13% Similarity=0.106 Sum_probs=107.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
..+.++.+|+++.. .+..++. .+|+||||||.... ...+..++++|+.|+.+|+++|...
T Consensus 57 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 130 (249)
T PRK09135 57 GSAAALQADLLDPD------ALPELVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ 130 (249)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 35889999999654 3555444 47999999996421 1234568899999999999999642
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.....++++++..... . + . ..+.|+.||+.+|.+++.+.
T Consensus 131 ~~~~~~~~~~~~~~~~~~--~------~------------------------------~-~~~~Y~~sK~~~~~~~~~l~ 171 (249)
T PRK09135 131 LRKQRGAIVNITDIHAER--P------L------------------------------K-GYPVYCAAKAALEMLTRSLA 171 (249)
T ss_pred HhhCCeEEEEEeChhhcC--C------C------------------------------C-CchhHHHHHHHHHHHHHHHH
Confidence 1123455555422110 0 0 0 22569999999999998876
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.++.++++|||.|+|+...+ .+ ...+......... ..-+.+++|+|++++.++.....
T Consensus 172 ~~~~~~i~~~~v~pg~~~~~~~~~------~~---~~~~~~~~~~~~~--------~~~~~~~~d~a~~~~~~~~~~~~- 233 (249)
T PRK09135 172 LELAPEVRVNAVAPGAILWPEDGN------SF---DEEARQAILARTP--------LKRIGTPEDIAEAVRFLLADASF- 233 (249)
T ss_pred HHHCCCCeEEEEEeccccCccccc------cC---CHHHHHHHHhcCC--------cCCCcCHHHHHHHHHHHcCcccc-
Confidence 47999999999999985421 11 1222221111111 11234589999999766643211
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++||++++
T Consensus 234 ----------------~~g~~~~i~~g 244 (249)
T PRK09135 234 ----------------ITGQILAVDGG 244 (249)
T ss_pred ----------------ccCcEEEECCC
Confidence 35889999998
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=99.30 E-value=4e-11 Score=131.33 Aligned_cols=185 Identities=15% Similarity=0.121 Sum_probs=122.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh-hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD-ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~-~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
.++.++.|||.+.. ++..++.++|+||||||..... ..+...+.+|+.|+.+|+++|.. .++++|||+||++
T Consensus 138 ~~v~iV~gDLtD~e------sI~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~-agVgRIV~VSSig 210 (576)
T PLN03209 138 EKLEIVECDLEKPD------QIGPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATV-AKVNHFILVTSLG 210 (576)
T ss_pred CceEEEEecCCCHH------HHHHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHH-hCCCEEEEEccch
Confidence 36899999998643 4777889999999999875321 23445788999999999999998 5789999999987
Q ss_pred cccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCcccc
Q psy5825 356 THSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVS 435 (596)
Q Consensus 356 v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G 435 (596)
++.... .. .... ...+|...|..+|.+|.. .||+++|||||.+++
T Consensus 211 a~~~g~--p~---------------------~~~~----------sk~~~~~~KraaE~~L~~--sGIrvTIVRPG~L~t 255 (576)
T PLN03209 211 TNKVGF--PA---------------------AILN----------LFWGVLCWKRKAEEALIA--SGLPYTIVRPGGMER 255 (576)
T ss_pred hcccCc--cc---------------------cchh----------hHHHHHHHHHHHHHHHHH--cCCCEEEEECCeecC
Confidence 642100 00 0000 124588899999998865 599999999999987
Q ss_pred CCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCC
Q psy5825 436 TWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDP 515 (596)
Q Consensus 436 ~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (596)
+... +... +.+.....+ ....-++..+|||++++.++..... ..+
T Consensus 256 p~d~----~~~t-------------~~v~~~~~d-~~~gr~isreDVA~vVvfLasd~~a-----------------s~~ 300 (576)
T PLN03209 256 PTDA----YKET-------------HNLTLSEED-TLFGGQVSNLQVAELMACMAKNRRL-----------------SYC 300 (576)
T ss_pred Cccc----cccc-------------cceeecccc-ccCCCccCHHHHHHHHHHHHcCchh-----------------ccc
Confidence 5321 1000 001001111 1112357888999999998875432 246
Q ss_pred CeEEccCCCCC-cccHHHHHHHHH
Q psy5825 516 PVYNLSISSSY-PITWLEYMNSVQ 538 (596)
Q Consensus 516 ~vyni~~~~~~-~vt~~el~~~l~ 538 (596)
.+|.|.++... ..++.+++..|-
T Consensus 301 kvvevi~~~~~p~~~~~~~~~~ip 324 (576)
T PLN03209 301 KVVEVIAETTAPLTPMEELLAKIP 324 (576)
T ss_pred eEEEEEeCCCCCCCCHHHHHHhcc
Confidence 78998876212 234666665544
|
|
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=99.30 E-value=3.3e-11 Score=115.06 Aligned_cols=144 Identities=15% Similarity=0.211 Sum_probs=108.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+++++.||+.++ ..+..++.++|+|||+++.... .+.++.+++++|.. .++++||++||+++
T Consensus 39 ~~~~~~~~d~~d~------~~~~~al~~~d~vi~~~~~~~~----------~~~~~~~~~~a~~~-~~~~~~v~~s~~~~ 101 (183)
T PF13460_consen 39 PGVEIIQGDLFDP------DSVKAALKGADAVIHAAGPPPK----------DVDAAKNIIEAAKK-AGVKRVVYLSSAGV 101 (183)
T ss_dssp TTEEEEESCTTCH------HHHHHHHTTSSEEEECCHSTTT----------HHHHHHHHHHHHHH-TTSSEEEEEEETTG
T ss_pred cccccceeeehhh------hhhhhhhhhcchhhhhhhhhcc----------cccccccccccccc-cccccceeeecccc
Confidence 7899999999865 4588999999999999976443 27889999999998 58999999999999
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
++........ . .. . ....|...+..+|.++.. .+++++|+||+.+||.
T Consensus 102 ~~~~~~~~~~------------------------~-~~----~-~~~~~~~~~~~~e~~~~~--~~~~~~ivrp~~~~~~ 149 (183)
T PF13460_consen 102 YRDPPGLFSD------------------------E-DK----P-IFPEYARDKREAEEALRE--SGLNWTIVRPGWIYGN 149 (183)
T ss_dssp TTTCTSEEEG------------------------G-TC----G-GGHHHHHHHHHHHHHHHH--STSEEEEEEESEEEBT
T ss_pred CCCCCccccc------------------------c-cc----c-chhhhHHHHHHHHHHHHh--cCCCEEEEECcEeEeC
Confidence 8853310000 0 00 0 124599999999999965 5999999999999997
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
..... ..+...+.....+|+++|+|.+|+.++.
T Consensus 150 ~~~~~----------------------~~~~~~~~~~~~~i~~~DvA~~~~~~l~ 182 (183)
T PF13460_consen 150 PSRSY----------------------RLIKEGGPQGVNFISREDVAKAIVEALE 182 (183)
T ss_dssp TSSSE----------------------EEESSTSTTSHCEEEHHHHHHHHHHHHH
T ss_pred CCcce----------------------eEEeccCCCCcCcCCHHHHHHHHHHHhC
Confidence 43210 0111134556699999999999999875
|
... |
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=5.9e-11 Score=121.27 Aligned_cols=169 Identities=11% Similarity=0.074 Sum_probs=105.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH---hccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh---cC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI---QHHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR---CS 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l---~~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~---~~ 343 (596)
.++.++.+|++++.. ...+..+ +..+|+|||||+..... ..+...+.+|+.|+.++++.+.. ..
T Consensus 54 ~~~~~~~~D~~d~~~---~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 130 (280)
T PRK06914 54 QNIKVQQLDVTDQNS---IHNFQLVLKEIGRIDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMRKQ 130 (280)
T ss_pred CceeEEecCCCCHHH---HHHHHHHHHhcCCeeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc
Confidence 478999999997642 0002222 24579999999875421 23455788999999999888642 13
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
+..+||++||.+.+.... ....|+.||+..+.++..++
T Consensus 131 ~~~~iv~vsS~~~~~~~~---------------------------------------~~~~Y~~sK~~~~~~~~~l~~~~ 171 (280)
T PRK06914 131 KSGKIINISSISGRVGFP---------------------------------------GLSPYVSSKYALEGFSESLRLEL 171 (280)
T ss_pred CCCEEEEECcccccCCCC---------------------------------------CCchhHHhHHHHHHHHHHHHHHh
Confidence 567999999975432100 12469999999999887764
Q ss_pred --cCCCEEEecCCccccCCCCCccccCC---CCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSN---NLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~---~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.|++++++|||.+.++.......... ........+.....+. +. .....+++++|||++++.++...
T Consensus 172 ~~~~i~v~~v~pg~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~---~~~~~~~~~~dva~~~~~~~~~~ 243 (280)
T PRK06914 172 KPFGIDVALIEPGSYNTNIWEVGKQLAENQSETTSPYKEYMKKIQKH---IN---SGSDTFGNPIDVANLIVEIAESK 243 (280)
T ss_pred hhhCCEEEEEecCCcccchhhccccccccccccccchHHHHHHHHHH---Hh---hhhhccCCHHHHHHHHHHHHcCC
Confidence 68999999999998864321100000 0001111111111111 11 12245789999999999998654
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.29 E-value=2.5e-10 Score=116.51 Aligned_cols=159 Identities=14% Similarity=0.139 Sum_probs=104.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||..... ..+...+.+|+.|+.++++.+...
T Consensus 59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~ 132 (274)
T PRK07775 59 GEAVAFPLDVTDPD------SVKSFVAQAEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPG 132 (274)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46888999999764 2444443 579999999975421 234456799999999999887531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.+|++.|.++..+
T Consensus 133 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~l~~~~ 173 (274)
T PRK07775 133 MIERRRGDLIFVGSDVALRQRP---------------------------------------HMGAYGAAKAGLEAMVTNL 173 (274)
T ss_pred HHhcCCceEEEECChHhcCCCC---------------------------------------CcchHHHHHHHHHHHHHHH
Confidence 2456899999987664211 1245999999999999887
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
. .|++++++|||.+.++.. +.........++..... .+ ......++++||+|++++.++..
T Consensus 174 ~~~~~~~gi~v~~v~pG~~~t~~~-----~~~~~~~~~~~~~~~~~------~~-~~~~~~~~~~~dva~a~~~~~~~ 239 (274)
T PRK07775 174 QMELEGTGVRASIVHPGPTLTGMG-----WSLPAEVIGPMLEDWAK------WG-QARHDYFLRASDLARAITFVAET 239 (274)
T ss_pred HHHhcccCeEEEEEeCCcccCccc-----ccCChhhhhHHHHHHHH------hc-ccccccccCHHHHHHHHHHHhcC
Confidence 6 489999999998755421 10000101111111111 01 12235689999999999988864
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.28 E-value=6.3e-11 Score=119.15 Aligned_cols=178 Identities=7% Similarity=-0.019 Sum_probs=112.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++. .+|+|||+|+..... ..+...+.+|+.|+.+++..+...
T Consensus 53 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (258)
T PRK12429 53 GKAIGVAMDVTDEE------AINAGIDYAVETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPI 126 (258)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence 57889999999654 3444443 589999999975432 234457889999966665555421
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+|||+||.+.+.... ..+.|+.+|++.+.++..+
T Consensus 127 ~~~~~~~~iv~iss~~~~~~~~---------------------------------------~~~~y~~~k~a~~~~~~~l 167 (258)
T PRK12429 127 MKAQGGGRIINMASVHGLVGSA---------------------------------------GKAAYVSAKHGLIGLTKVV 167 (258)
T ss_pred HHhcCCeEEEEEcchhhccCCC---------------------------------------CcchhHHHHHHHHHHHHHH
Confidence 4678999999986543210 1246999999999888765
Q ss_pred h-----cCCCEEEecCCccccCCCCCcc-ccCCCCC-CcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIV-GWSNNLY-GPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~-G~~~~~~-~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .++.++++|||.|+++...+.. ....... .....+... ++.......|++++|+|++++.++..
T Consensus 168 ~~~~~~~~i~v~~~~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~~~~~~d~a~~~~~l~~~ 239 (258)
T PRK12429 168 ALEGATHGVTVNAICPGYVDTPLVRKQIPDLAKERGISEEEVLEDV--------LLPLVPQKRFTTVEEIADYALFLASF 239 (258)
T ss_pred HHHhcccCeEEEEEecCCCcchhhhhhhhhhccccCCChHHHHHHH--------HhccCCccccCCHHHHHHHHHHHcCc
Confidence 4 5799999999999886532110 0000000 001111111 11122345799999999999888754
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|++|++.++
T Consensus 240 ~~~~----------------~~g~~~~~~~g 254 (258)
T PRK12429 240 AAKG----------------VTGQAWVVDGG 254 (258)
T ss_pred cccC----------------ccCCeEEeCCC
Confidence 3221 25789999876
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.27 E-value=5.6e-11 Score=119.87 Aligned_cols=176 Identities=15% Similarity=0.100 Sum_probs=115.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..++. .+|+|||+|+.... ...+...+.+|+.|+.+|++++...
T Consensus 52 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (257)
T PRK07067 52 PAAIAVSLDVTRQDS------IDRIVAAAVERFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARH 125 (257)
T ss_pred CceEEEEccCCCHHH------HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 468899999987642 444443 57999999997542 1345568899999999999998641
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||........ ....|+.||++.+.++..
T Consensus 126 ~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 166 (257)
T PRK07067 126 MVEQGRGGKIINMASQAGRRGEA---------------------------------------LVSHYCATKAAVISYTQS 166 (257)
T ss_pred HHhcCCCcEEEEeCCHHhCCCCC---------------------------------------CCchhhhhHHHHHHHHHH
Confidence 1125799999965321100 124699999999998876
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHH---hccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAA---LGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~---~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
++ .|+++++++||.|+++..... ..++.... .+......+.......+++++|+|++++.++
T Consensus 167 la~e~~~~gi~v~~i~pg~v~t~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~l~ 236 (257)
T PRK07067 167 AALALIRHGINVNAIAPGVVDTPMWDQV----------DALFARYENRPPGEKKRLVGEAVPLGRMGVPDDLTGMALFLA 236 (257)
T ss_pred HHHHhcccCeEEEEEeeCcccchhhhhh----------hhhhhhccCCCHHHHHHHHhhcCCCCCccCHHHHHHHHHHHh
Confidence 54 689999999999988642110 00000000 0000001122233457899999999999988
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|.+||+.++
T Consensus 237 s~~~~~----------------~~g~~~~v~gg 253 (257)
T PRK07067 237 SADADY----------------IVAQTYNVDGG 253 (257)
T ss_pred Cccccc----------------ccCcEEeecCC
Confidence 653221 35889999887
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.26 E-value=3.3e-10 Score=113.57 Aligned_cols=166 Identities=13% Similarity=0.120 Sum_probs=112.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh----------hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF----------DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~----------~~~~~~~~~~NV~GT~~LL~~a 339 (596)
.++.++.+|+++.. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+.+|++++
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 128 (250)
T PRK07774 55 GTAIAVQVDVSDPD------SAKAMADATVSAFGGIDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAV 128 (250)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 36788899999754 244433 358999999997431 1234457889999999999998
Q ss_pred Hhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 340 TRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 340 ~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
... .+..+||++||.++++. .+.|+.||++.|.++
T Consensus 129 ~~~~~~~~~~~iv~~sS~~~~~~------------------------------------------~~~Y~~sK~a~~~~~ 166 (250)
T PRK07774 129 YKHMAKRGGGAIVNQSSTAAWLY------------------------------------------SNFYGLAKVGLNGLT 166 (250)
T ss_pred HHHHHHhCCcEEEEEecccccCC------------------------------------------ccccHHHHHHHHHHH
Confidence 752 23569999999876541 135999999999998
Q ss_pred HHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+.+. .|+.+++++||.+..+.... ..+..+...+..+. +. .-+..++|+|++++.++.
T Consensus 167 ~~l~~~~~~~~i~v~~v~pg~~~t~~~~~--------~~~~~~~~~~~~~~----~~-----~~~~~~~d~a~~~~~~~~ 229 (250)
T PRK07774 167 QQLARELGGMNIRVNAIAPGPIDTEATRT--------VTPKEFVADMVKGI----PL-----SRMGTPEDLVGMCLFLLS 229 (250)
T ss_pred HHHHHHhCccCeEEEEEecCcccCccccc--------cCCHHHHHHHHhcC----CC-----CCCcCHHHHHHHHHHHhC
Confidence 8775 47999999999886653211 11222222222221 11 124568999999988876
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..+++||+.++
T Consensus 230 ~~~~~----------------~~g~~~~v~~g 245 (250)
T PRK07774 230 DEASW----------------ITGQIFNVDGG 245 (250)
T ss_pred hhhhC----------------cCCCEEEECCC
Confidence 53211 25789999987
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.25 E-value=4.9e-10 Score=112.92 Aligned_cols=184 Identities=12% Similarity=0.039 Sum_probs=123.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+.++. .+..++. ++|+|||+||..... ..+...+.+|+.|+.++++++...
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (257)
T PRK07074 49 ARFVPVACDLTDAA------SLAAALANAAAERGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEG 122 (257)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999754 2444443 479999999875321 123345789999999999988431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+... ....|+.+|++.+.++..+
T Consensus 123 ~~~~~~~~iv~~sS~~~~~~~----------------------------------------~~~~y~~sK~a~~~~~~~~ 162 (257)
T PRK07074 123 MLKRSRGAVVNIGSVNGMAAL----------------------------------------GHPAYSAAKAGLIHYTKLL 162 (257)
T ss_pred HHHcCCeEEEEEcchhhcCCC----------------------------------------CCcccHHHHHHHHHHHHHH
Confidence 345689999996543210 0125999999999999887
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++|||.|+++.... .......++..... .....+|++++|++++++.++....
T Consensus 163 a~~~~~~gi~v~~v~pg~v~t~~~~~------~~~~~~~~~~~~~~---------~~~~~~~~~~~d~a~~~~~l~~~~~ 227 (257)
T PRK07074 163 AVEYGRFGIRANAVAPGTVKTQAWEA------RVAANPQVFEELKK---------WYPLQDFATPDDVANAVLFLASPAA 227 (257)
T ss_pred HHHHhHhCeEEEEEEeCcCCcchhhc------ccccChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCchh
Confidence 6 57999999999998753211 00111122111111 1123579999999999999985322
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHH
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQA 539 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~ 539 (596)
.. ..|.++++.++ ......++++.+..
T Consensus 228 ~~----------------~~g~~~~~~~g--~~~~~~~~~~~~~~ 254 (257)
T PRK07074 228 RA----------------ITGVCLPVDGG--LTAGNREMARTLTL 254 (257)
T ss_pred cC----------------cCCcEEEeCCC--cCcCChhhhhhhcc
Confidence 11 35788999888 77888899887754
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.6e-10 Score=115.18 Aligned_cols=186 Identities=15% Similarity=0.157 Sum_probs=123.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..++. .+|+|||+||.... ...+...+.+|+.|+.++++.+..
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 131 (276)
T PRK05875 58 GAVRYEPADVTDED------QVARAVDAATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAAR 131 (276)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999998654 3444444 67999999986421 112455788999999999988764
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||.+++.... ..+.|+.+|++.|.+++.
T Consensus 132 ~~~~~~~g~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 172 (276)
T PRK05875 132 ELVRGGGGSFVGISSIAASNTHR---------------------------------------WFGAYGVTKSAVDHLMKL 172 (276)
T ss_pred HHHhcCCcEEEEEechhhcCCCC---------------------------------------CCcchHHHHHHHHHHHHH
Confidence 1 2345899999987654210 225699999999999988
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+. .+++++++|||.|.++..... .....+...+.. ......++.++|+|++++.++...
T Consensus 173 ~~~~~~~~~i~v~~i~Pg~v~t~~~~~~-------~~~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~ 236 (276)
T PRK05875 173 AADELGPSWVRVNSIRPGLIRTDLVAPI-------TESPELSADYRA---------CTPLPRVGEVEDVANLAMFLLSDA 236 (276)
T ss_pred HHHHhcccCeEEEEEecCccCCcccccc-------ccCHHHHHHHHc---------CCCCCCCcCHHHHHHHHHHHcCch
Confidence 76 579999999999976532110 001111111111 011234677999999999988654
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcc----cHHHHHHHHHHHc
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPI----TWLEYMNSVQAAG 541 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~v----t~~el~~~l~~~~ 541 (596)
... ..+++||++++ ..+ ++.+++..+....
T Consensus 237 ~~~----------------~~g~~~~~~~g--~~~~~~~~~~~~~~~~~~~~ 270 (276)
T PRK05875 237 ASW----------------ITGQVINVDGG--HMLRRGPDFSSMLEPVFGAD 270 (276)
T ss_pred hcC----------------cCCCEEEECCC--eeccCCccHHHHHHHHhhHH
Confidence 321 25789999988 444 6677776665443
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=3e-10 Score=116.11 Aligned_cols=164 Identities=10% Similarity=0.036 Sum_probs=105.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++.. +..++. .+|+|||+|+...+. ..+...+++|+.|+.+|++++..
T Consensus 50 ~~~~~~~~D~~d~~~------~~~~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 123 (277)
T PRK06180 50 DRALARLLDVTDFDA------IDAVVADAEATFGPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPG 123 (277)
T ss_pred CCeeEEEccCCCHHH------HHHHHHHHHHHhCCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 468889999997643 444433 579999999985421 22455789999999999998643
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||++.+.... ....|+.+|++.|.++..+
T Consensus 124 ~~~~~~~~iv~iSS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 164 (277)
T PRK06180 124 MRARRRGHIVNITSMGGLITMP---------------------------------------GIGYYCGSKFALEGISESL 164 (277)
T ss_pred HhccCCCEEEEEecccccCCCC---------------------------------------CcchhHHHHHHHHHHHHHH
Confidence 13456899999987653210 1246999999999988776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHH---HHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGG---AAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~---l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+ .|++++++|||.|.++.... ++......... .+........ .. ....++.++|+|++++.++.
T Consensus 165 a~e~~~~gi~v~~i~Pg~v~t~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~-~~-----~~~~~~~~~dva~~~~~~l~ 236 (277)
T PRK06180 165 AKEVAPFGIHVTAVEPGSFRTDWAGR--SMVRTPRSIADYDALFGPIRQARE-AK-----SGKQPGDPAKAAQAILAAVE 236 (277)
T ss_pred HHHhhhhCcEEEEEecCCcccCcccc--ccccCCCCcHhHHHHHHHHHHHHH-hh-----ccCCCCCHHHHHHHHHHHHc
Confidence 5 48999999999998764321 11110011111 1111111000 01 11235679999999999886
Q ss_pred hh
Q psy5825 492 KT 493 (596)
Q Consensus 492 ~~ 493 (596)
..
T Consensus 237 ~~ 238 (277)
T PRK06180 237 SD 238 (277)
T ss_pred CC
Confidence 53
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.24 E-value=3.4e-10 Score=113.86 Aligned_cols=169 Identities=13% Similarity=0.112 Sum_probs=114.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh---------hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF---------DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~---------~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++.- +..++ ..+|+||||||.... ...+...+.+|+.|+.+|++++.
T Consensus 52 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 125 (256)
T PRK12745 52 VEVIFFPADVADLSA------HEAMLDAAQAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVA 125 (256)
T ss_pred CceEEEEecCCCHHH------HHHHHHHHHHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHH
Confidence 478999999997542 43333 357999999987431 13455678999999999999885
Q ss_pred hc----CC-----CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHH
Q psy5825 341 RC----SQ-----LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAI 411 (596)
Q Consensus 341 ~~----~~-----vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~ 411 (596)
.. .+ +.+|||+||+.++.... ....|+.+|++
T Consensus 126 ~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a 166 (256)
T PRK12745 126 KRMLAQPEPEELPHRSIVFVSSVNAIMVSP---------------------------------------NRGEYCISKAG 166 (256)
T ss_pred HHHHhccCcCCCCCcEEEEECChhhccCCC---------------------------------------CCcccHHHHHH
Confidence 42 11 56799999987653211 12459999999
Q ss_pred HHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHH
Q psy5825 412 GESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMM 486 (596)
Q Consensus 412 aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~ai 486 (596)
.|.+++.++ .|++++++|||.|.++...+ +. ..+...+..+. . ....|.+++|+++++
T Consensus 167 ~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~~~---~~------~~~~~~~~~~~---~-----~~~~~~~~~d~a~~i 229 (256)
T PRK12745 167 LSMAAQLFAARLAEEGIGVYEVRPGLIKTDMTAP---VT------AKYDALIAKGL---V-----PMPRWGEPEDVARAV 229 (256)
T ss_pred HHHHHHHHHHHHHHhCCEEEEEecCCCcCccccc---cc------hhHHhhhhhcC---C-----CcCCCcCHHHHHHHH
Confidence 999988775 68999999999998864321 10 11111111111 1 123577999999999
Q ss_pred HHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 487 LGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 487 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
+.++...... ..|.+|++.++
T Consensus 230 ~~l~~~~~~~----------------~~G~~~~i~gg 250 (256)
T PRK12745 230 AALASGDLPY----------------STGQAIHVDGG 250 (256)
T ss_pred HHHhCCcccc----------------cCCCEEEECCC
Confidence 8877432210 35789999887
|
|
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.21 E-value=3.4e-10 Score=113.26 Aligned_cols=167 Identities=12% Similarity=0.086 Sum_probs=113.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||||+..... ..+...+.+|+.|+.++++++...
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (247)
T PRK12935 56 HDVYAVQADVSKVE------DANRLVEEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPY 129 (247)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999754 2444443 379999999975421 345568899999999999998742
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
....+||++||.+.+.... ....|+.||++.+.++..+
T Consensus 130 ~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 170 (247)
T PRK12935 130 ITEAEEGRIISISSIIGQAGGF---------------------------------------GQTNYSAAKAGMLGFTKSL 170 (247)
T ss_pred HHHcCCcEEEEEcchhhcCCCC---------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 2346899999976542110 1145999999988887665
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
. .++++++++||.|.++... ..+......+..+ ....++++++|++++++.++....
T Consensus 171 ~~~~~~~~i~v~~v~pg~v~t~~~~---------~~~~~~~~~~~~~---------~~~~~~~~~edva~~~~~~~~~~~ 232 (247)
T PRK12935 171 ALELAKTNVTVNAICPGFIDTEMVA---------EVPEEVRQKIVAK---------IPKKRFGQADEIAKGVVYLCRDGA 232 (247)
T ss_pred HHHHHHcCcEEEEEEeCCCcChhhh---------hccHHHHHHHHHh---------CCCCCCcCHHHHHHHHHHHcCccc
Confidence 4 5899999999999764211 0111111111111 122468999999999999875421
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|++||+.++
T Consensus 233 ~-----------------~~g~~~~i~~g 244 (247)
T PRK12935 233 Y-----------------ITGQQLNINGG 244 (247)
T ss_pred C-----------------ccCCEEEeCCC
Confidence 1 35889999887
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.19 E-value=2.1e-10 Score=115.38 Aligned_cols=170 Identities=10% Similarity=0.071 Sum_probs=113.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELL 336 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL 336 (596)
.++.++.+|++++. .+..+++ ++|+|||+||..... ..+...+.+|+.|+.+|+
T Consensus 56 ~~~~~~~~D~~d~~------~i~~~~~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~ 129 (254)
T PRK12746 56 GKAFLIEADLNSID------GVKKLVEQLKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLI 129 (254)
T ss_pred CcEEEEEcCcCCHH------HHHHHHHHHHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHH
Confidence 46889999999754 3444433 589999999975321 123457789999999999
Q ss_pred HHHHhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 337 DLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 337 ~~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
+++... ....+||++||..++.... ....|+.||++.+.+
T Consensus 130 ~~~~~~~~~~~~~v~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~ 170 (254)
T PRK12746 130 QQTLPLLRAEGRVINISSAEVRLGFT---------------------------------------GSIAYGLSKGALNTM 170 (254)
T ss_pred HHHHHHhhcCCEEEEECCHHhcCCCC---------------------------------------CCcchHhhHHHHHHH
Confidence 998752 2335899999988764211 124599999999998
Q ss_pred HHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 416 VEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 416 v~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
+..++ .++++++++||.|+++..... . ....+.....+. .....+++++|+|++++.++
T Consensus 171 ~~~~~~~~~~~~i~v~~v~pg~~~t~~~~~~---~-----~~~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~ 234 (254)
T PRK12746 171 TLPLAKHLGERGITVNTIMPGYTKTDINAKL---L-----DDPEIRNFATNS--------SVFGRIGQVEDIADAVAFLA 234 (254)
T ss_pred HHHHHHHHhhcCcEEEEEEECCccCcchhhh---c-----cChhHHHHHHhc--------CCcCCCCCHHHHHHHHHHHc
Confidence 86654 579999999999988643211 0 011111211111 11235778999999998776
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|.+||+.++
T Consensus 235 ~~~~~~----------------~~g~~~~i~~~ 251 (254)
T PRK12746 235 SSDSRW----------------VTGQIIDVSGG 251 (254)
T ss_pred CcccCC----------------cCCCEEEeCCC
Confidence 543210 25789999876
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.18 E-value=8.1e-10 Score=111.57 Aligned_cols=176 Identities=13% Similarity=0.099 Sum_probs=111.1
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
++.++.+|++++.. +..++ .++|+|||+|+.... ...+...+.+|+.|+.++++++...
T Consensus 59 ~~~~~~~D~~~~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 132 (264)
T PRK12829 59 KVTATVADVADPAQ------VERVFDTAVERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPL 132 (264)
T ss_pred ceEEEEccCCCHHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57889999997552 44333 468999999997621 1234568899999999999987431
Q ss_pred ---CCC-ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQL-KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~v-krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+. ..||++||.+...... ....|+.+|.+.|.++..
T Consensus 133 ~~~~~~~~~vv~~ss~~~~~~~~---------------------------------------~~~~y~~~K~a~~~~~~~ 173 (264)
T PRK12829 133 LKASGHGGVIIALSSVAGRLGYP---------------------------------------GRTPYAASKWAVVGLVKS 173 (264)
T ss_pred HHhCCCCeEEEEecccccccCCC---------------------------------------CCchhHHHHHHHHHHHHH
Confidence 233 5688888765322100 113599999999999887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCC-C-CCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNN-L-YGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~-~-~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
++ .+++++++|||+|+|+........... . .+...+.. +.+..+ ....+++++|+|++++.++.
T Consensus 174 l~~~~~~~~i~~~~l~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~~~~~~~d~a~~~~~l~~ 244 (264)
T PRK12829 174 LAIELGPLGIRVNAILPGIVRGPRMRRVIEARAQQLGIGLDEMEQ----EYLEKI-----SLGRMVEPEDIAATALFLAS 244 (264)
T ss_pred HHHHHhhcCeEEEEEecCCcCChHHHHHhhhhhhccCCChhHHHH----HHHhcC-----CCCCCCCHHHHHHHHHHHcC
Confidence 65 489999999999998753211000000 0 00001110 111111 12358999999999888764
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|+++++
T Consensus 245 ~~~~~----------------~~g~~~~i~~g 260 (264)
T PRK12829 245 PAARY----------------ITGQAISVDGN 260 (264)
T ss_pred ccccC----------------ccCcEEEeCCC
Confidence 32111 35789999987
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=99.18 E-value=1.3e-09 Score=109.02 Aligned_cols=174 Identities=13% Similarity=0.052 Sum_probs=114.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+++.. .+..++. .+|+|||+|+.... ...+...+.+|+.|+.+|++++...
T Consensus 52 ~~~~~~~~d~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (250)
T TIGR03206 52 GNAQAFACDITDRD------SVDTAVAAAEQALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPG 125 (250)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 56899999999654 2444443 58999999986421 1223457899999999998888631
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.++++... ....|+.+|++.+.++..+
T Consensus 126 ~~~~~~~~ii~iss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 166 (250)
T TIGR03206 126 MVERGAGRIVNIASDAARVGSS---------------------------------------GEAVYAACKGGLVAFSKTM 166 (250)
T ss_pred HHhcCCeEEEEECchhhccCCC---------------------------------------CCchHHHHHHHHHHHHHHH
Confidence 3567899999987765311 1245999999998888876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .+++++++|||.++++......++ ...+..++..+... + + ...+...+|+|++++.++....
T Consensus 167 a~~~~~~~i~v~~v~pg~~~~~~~~~~~~~---~~~~~~~~~~~~~~-~---~-----~~~~~~~~dva~~~~~l~~~~~ 234 (250)
T TIGR03206 167 AREHARHGITVNVVCPGPTDTALLDDICGG---AENPEKLREAFTRA-I---P-----LGRLGQPDDLPGAILFFSSDDA 234 (250)
T ss_pred HHHHhHhCcEEEEEecCcccchhHHhhhhc---cCChHHHHHHHHhc-C---C-----ccCCcCHHHHHHHHHHHcCccc
Confidence 5 489999999999988743221111 11122222222221 1 1 1124567899999999875432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.++
T Consensus 235 ~~----------------~~g~~~~~~~g 247 (250)
T TIGR03206 235 SF----------------ITGQVLSVSGG 247 (250)
T ss_pred CC----------------CcCcEEEeCCC
Confidence 11 35889999876
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.9e-09 Score=111.63 Aligned_cols=170 Identities=12% Similarity=0.058 Sum_probs=114.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++.. +..++ ..+|+|||+|+.... ...+..++.+|+.|+.++++++..
T Consensus 106 ~~~~~~~~Dl~~~~~------v~~~~~~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 179 (300)
T PRK06128 106 RKAVALPGDLKDEAF------CRQLVERAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIP 179 (300)
T ss_pred CeEEEEecCCCCHHH------HHHHHHHHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 467889999997542 44443 368999999996421 123566899999999999999975
Q ss_pred c-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 C-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 ~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
. ....+||++||+.++.... ....|+.||++.+.+++.++
T Consensus 180 ~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~la 220 (300)
T PRK06128 180 HLPPGASIINTGSIQSYQPSP---------------------------------------TLLDYASTKAAIVAFTKALA 220 (300)
T ss_pred hcCcCCEEEEECCccccCCCC---------------------------------------CchhHHHHHHHHHHHHHHHH
Confidence 2 2235899999988765311 11359999999999998765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+++++++||.|.++..... ......+..+..+ . ....+...+|+|.+++.++.....
T Consensus 221 ~el~~~gI~v~~v~PG~i~t~~~~~~-------~~~~~~~~~~~~~----~-----p~~r~~~p~dva~~~~~l~s~~~~ 284 (300)
T PRK06128 221 KQVAEKGIRVNAVAPGPVWTPLQPSG-------GQPPEKIPDFGSE----T-----PMKRPGQPVEMAPLYVLLASQESS 284 (300)
T ss_pred HHhhhcCcEEEEEEECcCcCCCcccC-------CCCHHHHHHHhcC----C-----CCCCCcCHHHHHHHHHHHhCcccc
Confidence 689999999999988743110 0011121111110 1 122466889999999888754221
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|++|++.++
T Consensus 285 ~----------------~~G~~~~v~gg 296 (300)
T PRK06128 285 Y----------------VTGEVFGVTGG 296 (300)
T ss_pred C----------------ccCcEEeeCCC
Confidence 1 35889999987
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=1.8e-09 Score=110.42 Aligned_cols=161 Identities=10% Similarity=0.055 Sum_probs=104.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++. .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 55 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~ 128 (275)
T PRK05876 55 FDVHGVMCDVRHRE------EVTHLADEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPR 128 (275)
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 36888999999754 3544443 47999999997431 123455789999999999998853
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHH----HHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAI----GES 414 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~----aE~ 414 (596)
.....+||++||...+.... ....|+.||+. +|.
T Consensus 129 m~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~ 169 (275)
T PRK05876 129 LLEQGTGGHVVFTASFAGLVPNA---------------------------------------GLGAYGVAKYGVVGLAET 169 (275)
T ss_pred HHhcCCCCEEEEeCChhhccCCC---------------------------------------CCchHHHHHHHHHHHHHH
Confidence 12246899999987654210 22469999997 666
Q ss_pred HHHHHh-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHH-HHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 415 VVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAA-AGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 415 lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~-~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+..++. .|+.+++++||.|.++..... . .+. ...........++......++++++|||++++.++..
T Consensus 170 l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dva~~~~~ai~~ 239 (275)
T PRK05876 170 LAREVTADGIGVSVLCPMVVETNLVANS-------E---RIRGAACAQSSTTGSPGPLPLQDDNLGVDDIAQLTADAILA 239 (275)
T ss_pred HHHHhhhcCcEEEEEEeCccccccccch-------h---hhcCccccccccccccccccccccCCCHHHHHHHHHHHHHc
Confidence 665555 799999999999977532110 0 000 0000000011223334456789999999999998854
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.17 E-value=2.1e-10 Score=114.85 Aligned_cols=173 Identities=13% Similarity=0.085 Sum_probs=111.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-hhhHHHHHHHHHHHHHHHHHHHHhc-CCCce
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-DELIQDAFTLNIQATRELLDLATRC-SQLKA 347 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-~~~~~~~~~~NV~GT~~LL~~a~~~-~~vkr 347 (596)
.++.++.+|++++. ++..++ ..+|+|||+|+.... ...+...+.+|+.|+.+|+++|... ....+
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~ 129 (248)
T PRK07806 56 GRASAVGADLTDEE------SVAALMDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSR 129 (248)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCce
Confidence 46889999999754 344443 358999999986422 2233456789999999999999862 22358
Q ss_pred EEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cC
Q psy5825 348 ILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YK 422 (596)
Q Consensus 348 fV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~g 422 (596)
|||+||..+..... .+ .+ + ....|+.||+++|.+++.++ .+
T Consensus 130 iv~isS~~~~~~~~--~~-~~-------------------------~------~~~~Y~~sK~a~e~~~~~l~~~~~~~~ 175 (248)
T PRK07806 130 VVFVTSHQAHFIPT--VK-TM-------------------------P------EYEPVARSKRAGEDALRALRPELAEKG 175 (248)
T ss_pred EEEEeCchhhcCcc--cc-CC-------------------------c------cccHHHHHHHHHHHHHHHHHHHhhccC
Confidence 99999965431100 00 00 0 12469999999999998865 67
Q ss_pred CCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCC
Q psy5825 423 LPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAP 502 (596)
Q Consensus 423 l~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~ 502 (596)
+++++++|+.+-++..... ... ..+ ..+ .. . .. ....+++++|+|++++.++....
T Consensus 176 i~v~~v~pg~~~~~~~~~~---~~~-~~~-~~~----~~-~-~~-----~~~~~~~~~dva~~~~~l~~~~~-------- 231 (248)
T PRK07806 176 IGFVVVSGDMIEGTVTATL---LNR-LNP-GAI----EA-R-RE-----AAGKLYTVSEFAAEVARAVTAPV-------- 231 (248)
T ss_pred eEEEEeCCccccCchhhhh---hcc-CCH-HHH----HH-H-Hh-----hhcccCCHHHHHHHHHHHhhccc--------
Confidence 8999999887755421100 000 000 000 00 0 01 12368999999999999987432
Q ss_pred CCCcCCCCCCCCCCeEEccCC
Q psy5825 503 PASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 503 ~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|.+|+++++
T Consensus 232 ----------~~g~~~~i~~~ 242 (248)
T PRK07806 232 ----------PSGHIEYVGGA 242 (248)
T ss_pred ----------cCccEEEecCc
Confidence 36889999998
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.16 E-value=1.4e-09 Score=108.20 Aligned_cols=168 Identities=13% Similarity=0.087 Sum_probs=113.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++.- +..++. .+|+|||+||..... ..+...+.+|+.|+.++++.+..
T Consensus 54 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 127 (246)
T PRK05653 54 GEARVLVFDVSDEAA------VRALIEAAVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPP 127 (246)
T ss_pred CceEEEEccCCCHHH------HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 568899999997642 444433 469999999876432 12355788999999999988853
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..++++||++||........ ....|+.+|...+.++..+
T Consensus 128 l~~~~~~~ii~~ss~~~~~~~~---------------------------------------~~~~y~~sk~~~~~~~~~l 168 (246)
T PRK05653 128 MIKARYGRIVNISSVSGVTGNP---------------------------------------GQTNYSAAKAGVIGFTKAL 168 (246)
T ss_pred HHhcCCcEEEEECcHHhccCCC---------------------------------------CCcHhHhHHHHHHHHHHHH
Confidence 13568999999976432100 1245999999998888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
. .++.++++|||.++|+...+ ....+.. +....++ ...++.++|+|++++.++....
T Consensus 169 ~~~~~~~~i~~~~i~pg~~~~~~~~~----------~~~~~~~---~~~~~~~-----~~~~~~~~dva~~~~~~~~~~~ 230 (246)
T PRK05653 169 ALELASRGITVNAVAPGFIDTDMTEG----------LPEEVKA---EILKEIP-----LGRLGQPEEVANAVAFLASDAA 230 (246)
T ss_pred HHHHhhcCeEEEEEEeCCcCCcchhh----------hhHHHHH---HHHhcCC-----CCCCcCHHHHHHHHHHHcCchh
Confidence 5 58999999999998864211 0111111 1111111 2457889999999999875432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..+.+|++++|
T Consensus 231 ~~----------------~~g~~~~~~gg 243 (246)
T PRK05653 231 SY----------------ITGQVIPVNGG 243 (246)
T ss_pred cC----------------ccCCEEEeCCC
Confidence 21 35889999887
|
|
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.15 E-value=4.9e-10 Score=112.34 Aligned_cols=170 Identities=11% Similarity=0.076 Sum_probs=113.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..++ ..+|+|||+||..... ..+...+.+|+.|+.++++++...
T Consensus 56 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 129 (252)
T PRK06077 56 GEGIGVLADVSTREG------CETLAKATIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKE 129 (252)
T ss_pred CeeEEEEeccCCHHH------HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHH
Confidence 357788999987542 33333 3689999999963321 123457899999999999998752
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....+||++||+.++.... ..+.|+.||...+.+++.++
T Consensus 130 ~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~~~~~~~~~l~~ 170 (252)
T PRK06077 130 MREGGAIVNIASVAGIRPAY---------------------------------------GLSIYGAMKAAVINLTKYLAL 170 (252)
T ss_pred hhcCcEEEEEcchhccCCCC---------------------------------------CchHHHHHHHHHHHHHHHHHH
Confidence 2235899999987764211 22469999999999998876
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
.++.+.+++||.|.++....... ...+....... .......+++++|+|++++.++....
T Consensus 171 ~~~~~i~v~~v~Pg~i~t~~~~~~~~-------~~~~~~~~~~~-------~~~~~~~~~~~~dva~~~~~~~~~~~--- 233 (252)
T PRK06077 171 ELAPKIRVNAIAPGFVKTKLGESLFK-------VLGMSEKEFAE-------KFTLMGKILDPEEVAEFVAAILKIES--- 233 (252)
T ss_pred HHhcCCEEEEEeeCCccChHHHhhhh-------cccccHHHHHH-------hcCcCCCCCCHHHHHHHHHHHhCccc---
Confidence 47899999999997753211000 00000000000 01112368999999999999885321
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..+++||+.++
T Consensus 234 ---------------~~g~~~~i~~g 244 (252)
T PRK06077 234 ---------------ITGQVFVLDSG 244 (252)
T ss_pred ---------------cCCCeEEecCC
Confidence 25789999987
|
|
| >KOG2774|consensus | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.8e-10 Score=109.72 Aligned_cols=187 Identities=16% Similarity=0.147 Sum_probs=129.7
Q ss_pred ccccEEEEcCccCChhh--hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHH
Q psy5825 303 HHIHVIIHAAASLRFDE--LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHV 380 (596)
Q Consensus 303 ~~vd~ViH~AA~v~~~~--~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~ 380 (596)
..+|..||..|..+... +..-+.++|+.|..|+|++|.+ .++ ++..-||++++|....-+ |
T Consensus 109 ~RIdWL~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~-~kL-~iFVPSTIGAFGPtSPRN---------P------ 171 (366)
T KOG2774|consen 109 KRIDWLVHFSALLSAVGETNVPLALQVNIRGVHNILQVAAK-HKL-KVFVPSTIGAFGPTSPRN---------P------ 171 (366)
T ss_pred cccceeeeHHHHHHHhcccCCceeeeecchhhhHHHHHHHH-cCe-eEeecccccccCCCCCCC---------C------
Confidence 45899999988765322 2223678999999999999998 455 455679999999743111 0
Q ss_pred HhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHH
Q psy5825 381 MQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGA 458 (596)
Q Consensus 381 ~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~ 458 (596)
+|.+.-+...+.||.||..||.+-..+. .|+.+..+|++.++.... ||-....+ ...++..+
T Consensus 172 ------------TPdltIQRPRTIYGVSKVHAEL~GEy~~hrFg~dfr~~rfPg~is~~~---pgggttdy-a~A~f~~A 235 (366)
T KOG2774|consen 172 ------------TPDLTIQRPRTIYGVSKVHAELLGEYFNHRFGVDFRSMRFPGIISATK---PGGGTTDY-AIAIFYDA 235 (366)
T ss_pred ------------CCCeeeecCceeechhHHHHHHHHHHHHhhcCccceecccCcccccCC---CCCCcchh-HHHHHHHH
Confidence 1111111033679999999998876665 789999999888877643 22111112 23444444
Q ss_pred H-hccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHH
Q psy5825 459 A-LGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSV 537 (596)
Q Consensus 459 ~-~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l 537 (596)
. .|... .+..++..+.++|+.||..+++..+..+... -..++||+++ -..|-.++++.|
T Consensus 236 l~~gk~t-Cylrpdtrlpmmy~~dc~~~~~~~~~a~~~~----------------lkrr~ynvt~---~sftpee~~~~~ 295 (366)
T KOG2774|consen 236 LQKGKHT-CYLRPDTRLPMMYDTDCMASVIQLLAADSQS----------------LKRRTYNVTG---FSFTPEEIADAI 295 (366)
T ss_pred HHcCCcc-cccCCCccCceeehHHHHHHHHHHHhCCHHH----------------hhhheeeece---eccCHHHHHHHH
Confidence 3 45443 4456889999999999999999888765431 2467999987 478899999999
Q ss_pred HHHcc
Q psy5825 538 QAAGK 542 (596)
Q Consensus 538 ~~~~~ 542 (596)
.+.+.
T Consensus 296 ~~~~p 300 (366)
T KOG2774|consen 296 RRVMP 300 (366)
T ss_pred HhhCC
Confidence 99876
|
|
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=1.8e-09 Score=109.07 Aligned_cols=114 Identities=16% Similarity=0.113 Sum_probs=82.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..++ ..+|+|||+|+...+ ...+...+.+|+.|+..+++.+..
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (260)
T PRK12823 56 GEALALTADLETYA------GAQAAMAAAVEAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLP 129 (260)
T ss_pred CeEEEEEEeCCCHH------HHHHHHHHHHHHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46788999999753 233333 358999999985321 122445778999998877666553
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||..+++. ....|+.||++.+.+++.
T Consensus 130 ~~~~~~~g~iv~~sS~~~~~~-----------------------------------------~~~~Y~~sK~a~~~~~~~ 168 (260)
T PRK12823 130 HMLAQGGGAIVNVSSIATRGI-----------------------------------------NRVPYSAAKGGVNALTAS 168 (260)
T ss_pred HHHhcCCCeEEEEcCccccCC-----------------------------------------CCCccHHHHHHHHHHHHH
Confidence 1 34568999999876542 113499999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCC
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~ 437 (596)
++ .|+++++++||+|+++.
T Consensus 169 la~e~~~~gi~v~~v~Pg~v~t~~ 192 (260)
T PRK12823 169 LAFEYAEHGIRVNAVAPGGTEAPP 192 (260)
T ss_pred HHHHhcccCcEEEEEecCccCCcc
Confidence 65 58999999999999863
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.13 E-value=2e-09 Score=107.39 Aligned_cols=169 Identities=11% Similarity=0.102 Sum_probs=113.6
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc----C
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC----S 343 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~----~ 343 (596)
.+.++.+|+++.. .+..++. .+|+|||+|+..... ..+..++.+|+.|+.++++++... .
T Consensus 54 ~~~~~~~D~~~~~------~v~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~ 127 (245)
T PRK07060 54 GCEPLRLDVGDDA------AIRAALAAAGAFDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAG 127 (245)
T ss_pred CCeEEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcC
Confidence 3567889998653 3445444 589999999975421 234557889999999999988752 1
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
...+||++||...+.... ....|+.+|.+++.+++.++
T Consensus 128 ~~~~iv~~sS~~~~~~~~---------------------------------------~~~~y~~sK~a~~~~~~~~a~~~ 168 (245)
T PRK07060 128 RGGSIVNVSSQAALVGLP---------------------------------------DHLAYCASKAALDAITRVLCVEL 168 (245)
T ss_pred CCcEEEEEccHHHcCCCC---------------------------------------CCcHhHHHHHHHHHHHHHHHHHH
Confidence 136899999987654211 12469999999999998775
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
.+++++++|||+|+++..... | ..+ .....+.. .+ ....|++++|+|++++.++......
T Consensus 169 ~~~~i~v~~v~pg~v~~~~~~~~--~----~~~-~~~~~~~~----~~-----~~~~~~~~~d~a~~~~~l~~~~~~~-- 230 (245)
T PRK07060 169 GPHGIRVNSVNPTVTLTPMAAEA--W----SDP-QKSGPMLA----AI-----PLGRFAEVDDVAAPILFLLSDAASM-- 230 (245)
T ss_pred hhhCeEEEEEeeCCCCCchhhhh--c----cCH-HHHHHHHh----cC-----CCCCCCCHHHHHHHHHHHcCcccCC--
Confidence 479999999999988643210 1 111 11111111 11 1235899999999999988653321
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|+++++.++
T Consensus 231 --------------~~G~~~~~~~g 241 (245)
T PRK07060 231 --------------VSGVSLPVDGG 241 (245)
T ss_pred --------------ccCcEEeECCC
Confidence 35888888776
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.12 E-value=1.7e-09 Score=106.57 Aligned_cols=147 Identities=13% Similarity=0.100 Sum_probs=97.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHH----HHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRFD-------ELIQDAFTLNIQATREL----LDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~L----L~~a~~~ 342 (596)
..++++.+|++++. .+..++. ++|+|||+|+..... ..+...+.+|+.|+.++ +.++..
T Consensus 47 ~~~~~~~~D~~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~- 119 (227)
T PRK08219 47 PGATPFPVDLTDPE------AIAAAVEQLGRLDVLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALRA- 119 (227)
T ss_pred ccceEEecCCCCHH------HHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-
Confidence 35788999999754 4666665 589999999975421 22445788999995554 444444
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
...+||++||..+++... ....|+.+|+..+.++..++
T Consensus 120 -~~~~~v~~ss~~~~~~~~---------------------------------------~~~~y~~~K~a~~~~~~~~~~~ 159 (227)
T PRK08219 120 -AHGHVVFINSGAGLRANP---------------------------------------GWGSYAASKFALRALADALREE 159 (227)
T ss_pred -CCCeEEEEcchHhcCcCC---------------------------------------CCchHHHHHHHHHHHHHHHHHH
Confidence 357899999987664311 12459999999999887765
Q ss_pred -cC-CCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -YK-LPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -~g-l~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.+ +++.+++||.+.++.. ..+.. ..+. ......|++++|+|++++.++..
T Consensus 160 ~~~~i~~~~i~pg~~~~~~~-------------~~~~~--~~~~-------~~~~~~~~~~~dva~~~~~~l~~ 211 (227)
T PRK08219 160 EPGNVRVTSVHPGRTDTDMQ-------------RGLVA--QEGG-------EYDPERYLRPETVAKAVRFAVDA 211 (227)
T ss_pred hcCCceEEEEecCCccchHh-------------hhhhh--hhcc-------ccCCCCCCCHHHHHHHHHHHHcC
Confidence 44 8888888887644311 00000 0010 11124689999999999999865
|
|
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=99.11 E-value=4e-09 Score=104.63 Aligned_cols=167 Identities=14% Similarity=0.095 Sum_probs=110.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+|+..... ..+...+.+|+.|+.+|+++|...
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (239)
T TIGR01830 48 VKALGVVCDVSDRE------DVKAVVEEIEEELGPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRI 121 (239)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999754 2555443 469999999986421 234567899999999999998742
Q ss_pred ---CCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+..+||++||.+. +|.. ....|+.+|++.+.++..
T Consensus 122 ~~~~~~~~~v~~sS~~~~~g~~----------------------------------------~~~~y~~~k~a~~~~~~~ 161 (239)
T TIGR01830 122 MIKQRSGRIINISSVVGLMGNA----------------------------------------GQANYAASKAGVIGFTKS 161 (239)
T ss_pred HHhcCCeEEEEECCccccCCCC----------------------------------------CCchhHHHHHHHHHHHHH
Confidence 34569999999754 4320 124599999998888766
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.++++|||.+.++...+ . ...+...+. +.+ + ..-+.+++|++.+++.++...
T Consensus 162 l~~~~~~~g~~~~~i~pg~~~~~~~~~-------~--~~~~~~~~~-~~~---~-----~~~~~~~~~~a~~~~~~~~~~ 223 (239)
T TIGR01830 162 LAKELASRNITVNAVAPGFIDTDMTDK-------L--SEKVKKKIL-SQI---P-----LGRFGTPEEVANAVAFLASDE 223 (239)
T ss_pred HHHHHhhcCeEEEEEEECCCCChhhhh-------c--ChHHHHHHH-hcC---C-----cCCCcCHHHHHHHHHHHhCcc
Confidence 54 68999999999886542211 0 111111111 111 1 122668899999998887432
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..+++||+.++
T Consensus 224 ~~~----------------~~g~~~~~~~g 237 (239)
T TIGR01830 224 ASY----------------ITGQVIHVDGG 237 (239)
T ss_pred cCC----------------cCCCEEEeCCC
Confidence 110 35789999765
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.10 E-value=2.7e-09 Score=105.75 Aligned_cols=160 Identities=11% Similarity=0.079 Sum_probs=110.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
..+.++.+|+.+.. ++..+++ ++|+|||+|+...+ ...+...+.+|+.|+.++++++..
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (239)
T PRK12828 54 DALRIGGIDLVDPQ------AARRAVDEVNRQFGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPA 127 (239)
T ss_pred cCceEEEeecCCHH------HHHHHHHHHHHHhCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHH
Confidence 35678889998653 2444433 68999999986432 122445788999999999998853
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..++.+||++||...++... ....|+.+|++.+.++..+
T Consensus 128 ~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~y~~sk~a~~~~~~~~ 168 (239)
T PRK12828 128 LTASGGGRIVNIGAGAALKAGP---------------------------------------GMGAYAAAKAGVARLTEAL 168 (239)
T ss_pred HHhcCCCEEEEECchHhccCCC---------------------------------------CcchhHHHHHHHHHHHHHH
Confidence 13578999999998765311 1135999999998888765
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .+++++++|||.|+++.... . ++. .....|++++|+|.+++.++....
T Consensus 169 a~~~~~~~i~~~~i~pg~v~~~~~~~--------~----------------~~~--~~~~~~~~~~dva~~~~~~l~~~~ 222 (239)
T PRK12828 169 AAELLDRGITVNAVLPSIIDTPPNRA--------D----------------MPD--ADFSRWVTPEQIAAVIAFLLSDEA 222 (239)
T ss_pred HHHhhhcCeEEEEEecCcccCcchhh--------c----------------CCc--hhhhcCCCHHHHHHHHHHHhCccc
Confidence 4 58999999999998752110 0 000 011237999999999988886432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|.+|++.++
T Consensus 223 ~~----------------~~g~~~~~~g~ 235 (239)
T PRK12828 223 QA----------------ITGASIPVDGG 235 (239)
T ss_pred cc----------------ccceEEEecCC
Confidence 21 24778888876
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=3.6e-09 Score=106.70 Aligned_cols=175 Identities=10% Similarity=0.102 Sum_probs=113.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCC---hh---hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLR---FD---ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~---~~---~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++.. +..+++ .+|+|||+|+... +. ..+...+.+|+.|+.++++++...
T Consensus 55 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 128 (258)
T PRK08628 55 PRAEFVQVDLTDDAQ------CRDAVEQTVAKFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHL 128 (258)
T ss_pred CceEEEEccCCCHHH------HHHHHHHHHHhcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHh
Confidence 468899999997642 444443 5899999999632 11 345567899999999999988641
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....+||++||...+.... ....|+.||+..+.+++.++
T Consensus 129 ~~~~~~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l~~ 169 (258)
T PRK08628 129 KASRGAIVNISSKTALTGQG---------------------------------------GTSGYAAAKGAQLALTREWAV 169 (258)
T ss_pred hccCcEEEEECCHHhccCCC---------------------------------------CCchhHHHHHHHHHHHHHHHH
Confidence 2346899999977643210 12469999999999998765
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.++.++.++||.|+++... .|...+..+... ....... ++. ...++.++|+|.+++.++......
T Consensus 170 e~~~~~i~v~~v~pg~v~t~~~~---~~~~~~~~~~~~-~~~~~~~---~~~----~~~~~~~~dva~~~~~l~~~~~~~ 238 (258)
T PRK08628 170 ALAKDGVRVNAVIPAEVMTPLYE---NWIATFDDPEAK-LAAITAK---IPL----GHRMTTAEEIADTAVFLLSERSSH 238 (258)
T ss_pred HHhhcCeEEEEEecCccCCHHHH---HHhhhccCHHHH-HHHHHhc---CCc----cccCCCHHHHHHHHHHHhChhhcc
Confidence 5899999999999886421 122111111111 1111111 111 124688899999999988654321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|.+|.+.++
T Consensus 239 ----------------~~g~~~~~~gg 249 (258)
T PRK08628 239 ----------------TTGQWLFVDGG 249 (258)
T ss_pred ----------------ccCceEEecCC
Confidence 25677877655
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=2.1e-09 Score=107.70 Aligned_cols=170 Identities=14% Similarity=0.029 Sum_probs=113.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+|+..... ..+...+.+|+.|+.++++++...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (250)
T PRK08063 54 RKALAVKANVGDVE------KIKEMFAQIDEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKL 127 (250)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999764 3444443 579999999864321 123446789999999999998752
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+|||+||...+.... ....|+.||++.+.+++.+
T Consensus 128 ~~~~~~g~iv~~sS~~~~~~~~---------------------------------------~~~~y~~sK~a~~~~~~~~ 168 (250)
T PRK08063 128 MEKVGGGKIISLSSLGSIRYLE---------------------------------------NYTTVGVSKAALEALTRYL 168 (250)
T ss_pred HHhcCCeEEEEEcchhhccCCC---------------------------------------CccHHHHHHHHHHHHHHHH
Confidence 2456999999976543210 1246999999999999876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||+|..+.....+ ....+... .... .+ ...+++++|+|++++.++....
T Consensus 169 ~~~~~~~~i~v~~i~pg~v~t~~~~~~~-------~~~~~~~~-~~~~---~~-----~~~~~~~~dva~~~~~~~~~~~ 232 (250)
T PRK08063 169 AVELAPKGIAVNAVSGGAVDTDALKHFP-------NREELLED-ARAK---TP-----AGRMVEPEDVANAVLFLCSPEA 232 (250)
T ss_pred HHHHhHhCeEEEeEecCcccCchhhhcc-------CchHHHHH-HhcC---CC-----CCCCcCHHHHHHHHHHHcCchh
Confidence 5 6899999999999765321111 11111111 1111 11 1247899999999998876532
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.++
T Consensus 233 ~~----------------~~g~~~~~~gg 245 (250)
T PRK08063 233 DM----------------IRGQTIIVDGG 245 (250)
T ss_pred cC----------------ccCCEEEECCC
Confidence 21 35788998877
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.09 E-value=1.1e-09 Score=110.45 Aligned_cols=177 Identities=11% Similarity=0.016 Sum_probs=111.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|+|||+|+.... ...+...+++|+.|+.++++++...
T Consensus 53 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (259)
T PRK12384 53 GMAYGFGADATSEQ------SVLALSRGVDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRL 126 (259)
T ss_pred ceeEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 36889999999653 243333 357999999986431 1234567899999999888877541
Q ss_pred ---CC-CceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 343 ---SQ-LKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 343 ---~~-vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
.+ ..+||++||... ++.. ....|+.||++.+.++.
T Consensus 127 l~~~~~~~~iv~~ss~~~~~~~~----------------------------------------~~~~Y~~sKaa~~~l~~ 166 (259)
T PRK12384 127 MIRDGIQGRIIQINSKSGKVGSK----------------------------------------HNSGYSAAKFGGVGLTQ 166 (259)
T ss_pred HHhCCCCcEEEEecCcccccCCC----------------------------------------CCchhHHHHHHHHHHHH
Confidence 23 358999999653 2210 12469999999888877
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHH--hccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAA--LGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~--~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
.++ .|++++++|||.++++... . .. +..+..... .+.......+......+++++||+++++.++
T Consensus 167 ~la~e~~~~gi~v~~v~pg~~~~~~~~-----~-~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~l~ 238 (259)
T PRK12384 167 SLALDLAEYGITVHSLMLGNLLKSPMF-----Q-SL--LPQYAKKLGIKPDEVEQYYIDKVPLKRGCDYQDVLNMLLFYA 238 (259)
T ss_pred HHHHHHHHcCcEEEEEecCCcccchhh-----h-hh--hHHHHHhcCCChHHHHHHHHHhCcccCCCCHHHHHHHHHHHc
Confidence 654 7899999999998775221 0 00 001110000 0000001112233457889999999999887
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|.+||+.++
T Consensus 239 ~~~~~~----------------~~G~~~~v~~g 255 (259)
T PRK12384 239 SPKASY----------------CTGQSINVTGG 255 (259)
T ss_pred Cccccc----------------ccCceEEEcCC
Confidence 543211 35889999987
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=4.6e-09 Score=105.74 Aligned_cols=170 Identities=9% Similarity=0.023 Sum_probs=114.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+++.. .+..++. .+|+|||+||.... ...+...+.+|+.|+.+|++++...
T Consensus 59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (255)
T PRK07523 59 LSAHALAFDVTDHD------AVRAAIDAFEAEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARH 132 (255)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35888999999754 3555543 47999999997532 1234567889999999999998742
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||........ ....|+.+|...+.+++.+
T Consensus 133 ~~~~~~g~iv~iss~~~~~~~~---------------------------------------~~~~y~~sK~a~~~~~~~~ 173 (255)
T PRK07523 133 MIARGAGKIINIASVQSALARP---------------------------------------GIAPYTATKGAVGNLTKGM 173 (255)
T ss_pred HHHhCCeEEEEEccchhccCCC---------------------------------------CCccHHHHHHHHHHHHHHH
Confidence 2457899999976432100 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++|||.+.++..... .. ...+........ + ...|..++|+|.+++.++....
T Consensus 174 a~e~~~~gi~v~~i~pg~~~t~~~~~~-------~~-~~~~~~~~~~~~---~-----~~~~~~~~dva~~~~~l~~~~~ 237 (255)
T PRK07523 174 ATDWAKHGLQCNAIAPGYFDTPLNAAL-------VA-DPEFSAWLEKRT---P-----AGRWGKVEELVGACVFLASDAS 237 (255)
T ss_pred HHHhhHhCeEEEEEEECcccCchhhhh-------cc-CHHHHHHHHhcC---C-----CCCCcCHHHHHHHHHHHcCchh
Confidence 5 689999999999988643110 00 111111111111 1 2346789999999988875432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.++
T Consensus 238 ~~----------------~~G~~i~~~gg 250 (255)
T PRK07523 238 SF----------------VNGHVLYVDGG 250 (255)
T ss_pred cC----------------ccCcEEEECCC
Confidence 21 35789999887
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.08 E-value=2.6e-09 Score=107.11 Aligned_cols=174 Identities=10% Similarity=0.037 Sum_probs=113.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++.. +..+++ .+|+|||||+.... ...+...+.+|+.|+.++++.+..
T Consensus 53 ~~~~~~~~D~~~~~~------~~~~~~~i~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 126 (252)
T PRK06138 53 GRAFARQGDVGSAEA------VEALVDFVAARWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPI 126 (252)
T ss_pred CeEEEEEcCCCCHHH------HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 468899999997643 444443 68999999997532 122345789999999888776642
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||........ ..+.|+.+|++.+.++..+
T Consensus 127 ~~~~~~~~ii~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 167 (252)
T PRK06138 127 MQRQGGGSIVNTASQLALAGGR---------------------------------------GRAAYVASKGAIASLTRAM 167 (252)
T ss_pred HHhcCCeEEEEECChhhccCCC---------------------------------------CccHHHHHHHHHHHHHHHH
Confidence 13567999999986543110 1246999999999999887
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++|||+|+++.......+.. .+ ..+.....+ ......|++++|++.+++.++....
T Consensus 168 ~~~~~~~~i~v~~v~pg~~~t~~~~~~~~~~~---~~-~~~~~~~~~--------~~~~~~~~~~~d~a~~~~~l~~~~~ 235 (252)
T PRK06138 168 ALDHATDGIRVNAVAPGTIDTPYFRRIFARHA---DP-EALREALRA--------RHPMNRFGTAEEVAQAALFLASDES 235 (252)
T ss_pred HHHHHhcCeEEEEEEECCccCcchhhhhcccc---Ch-HHHHHHHHh--------cCCCCCCcCHHHHHHHHHHHcCchh
Confidence 5 48999999999998875432211110 11 111111111 0111237889999999999876543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|.++++.++
T Consensus 236 ~~----------------~~g~~~~~~~g 248 (252)
T PRK06138 236 SF----------------ATGTTLVVDGG 248 (252)
T ss_pred cC----------------ccCCEEEECCC
Confidence 21 35777887665
|
|
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.07 E-value=5.2e-09 Score=105.37 Aligned_cols=162 Identities=13% Similarity=0.096 Sum_probs=105.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++.. +..++ ..+|+|||+|+.... ...+...+.+|+.|+..+++++..
T Consensus 54 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 127 (258)
T PRK07890 54 RRALAVPTDITDEDQ------CANLVALALERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTP 127 (258)
T ss_pred CceEEEecCCCCHHH------HHHHHHHHHHHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 468899999997542 44333 457999999986421 133456889999999999999975
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
. ....+||++||...+.... ....|+.+|.+.+.+++.+
T Consensus 128 ~~~~~~~~ii~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~l~~~~ 168 (258)
T PRK07890 128 ALAESGGSIVMINSMVLRHSQP---------------------------------------KYGAYKMAKGALLAASQSL 168 (258)
T ss_pred HHHhCCCEEEEEechhhccCCC---------------------------------------CcchhHHHHHHHHHHHHHH
Confidence 2 1225899999986543210 1246999999999999887
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCc--HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGP--GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~--~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .+++++++|||.|+++...+...+.....+. ..++..+.. ......+++++|+|++++.++..
T Consensus 169 a~~~~~~~i~v~~v~pg~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~a~~~l~~~ 239 (258)
T PRK07890 169 ATELGPQGIRVNSVAPGYIWGDPLKGYFRHQAGKYGVTVEQIYAETAA---------NSDLKRLPTDDEVASAVLFLASD 239 (258)
T ss_pred HHHHhhcCcEEEEEeCCccCcHHHHHHhhhcccccCCCHHHHHHHHhh---------cCCccccCCHHHHHHHHHHHcCH
Confidence 6 5899999999999997532110000000000 011111111 01122478899999999888764
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=99.07 E-value=3.4e-09 Score=108.35 Aligned_cols=178 Identities=12% Similarity=0.039 Sum_probs=111.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh---------hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF---------DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++.. +..++. .+|+|||+||.... ...+...+.+|+.|+.++++++.
T Consensus 66 ~~~~~~~~Dl~d~~~------~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 139 (280)
T PLN02253 66 PNVCFFHCDVTVEDD------VSRAVDFTVDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAA 139 (280)
T ss_pred CceEEEEeecCCHHH------HHHHHHHHHHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence 468899999997543 544443 68999999997532 12345689999999999999886
Q ss_pred hc---CCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 341 RC---SQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 341 ~~---~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
.. ....++|++||.+. ++.. ....|+.||++.|.++
T Consensus 140 ~~~~~~~~g~ii~isS~~~~~~~~----------------------------------------~~~~Y~~sK~a~~~~~ 179 (280)
T PLN02253 140 RIMIPLKKGSIVSLCSVASAIGGL----------------------------------------GPHAYTGSKHAVLGLT 179 (280)
T ss_pred HHHHhcCCceEEEecChhhcccCC----------------------------------------CCcccHHHHHHHHHHH
Confidence 41 13357899888664 2210 1246999999999999
Q ss_pred HHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+.++ .|+.+.+++||.|..+...... .+. ......+..+.. . +.........++.++|+|++++.++.
T Consensus 180 ~~la~e~~~~gi~v~~i~pg~v~t~~~~~~~--~~~-~~~~~~~~~~~~-~---~~~~~~l~~~~~~~~dva~~~~~l~s 252 (280)
T PLN02253 180 RSVAAELGKHGIRVNCVSPYAVPTALALAHL--PED-ERTEDALAGFRA-F---AGKNANLKGVELTVDDVANAVLFLAS 252 (280)
T ss_pred HHHHHHhhhcCeEEEEEeeCccccccccccc--ccc-cchhhhhhhhHH-H---hhcCCCCcCCCCCHHHHHHHHHhhcC
Confidence 8765 5899999999999775321100 000 000111111110 0 00000011224779999999998875
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|.++++.++
T Consensus 253 ~~~~~----------------i~G~~i~vdgG 268 (280)
T PLN02253 253 DEARY----------------ISGLNLMIDGG 268 (280)
T ss_pred ccccc----------------ccCcEEEECCc
Confidence 42211 35788888776
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=9.4e-09 Score=102.86 Aligned_cols=172 Identities=13% Similarity=0.065 Sum_probs=113.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..++. .+|+|||+|+..... ..+...+.+|+.|+.++++.+..
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 126 (251)
T PRK07231 53 GRAIAVAADVSDEA------DVEAAVAAALERFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVP 126 (251)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 46889999999765 3555554 469999999974211 23456889999998888887764
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||.++++... ....|+.+|...+.++..
T Consensus 127 ~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~y~~sk~~~~~~~~~ 167 (251)
T PRK07231 127 AMRGEGGGAIVNVASTAGLRPRP---------------------------------------GLGWYNASKGAVITLTKA 167 (251)
T ss_pred HHHhcCCcEEEEEcChhhcCCCC---------------------------------------CchHHHHHHHHHHHHHHH
Confidence 1 3567899999988765311 124599999999988877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .++++++++||.|.++...... .. . .......+.. ......+++++|+|.+++.++...
T Consensus 168 ~a~~~~~~~i~v~~i~pg~~~t~~~~~~~---~~-~-~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~ 233 (251)
T PRK07231 168 LAAELGPDKIRVNAVAPVVVETGLLEAFM---GE-P-TPENRAKFLA---------TIPLGRLGTPEDIANAALFLASDE 233 (251)
T ss_pred HHHHhhhhCeEEEEEEECccCCCcchhhh---cc-c-ChHHHHHHhc---------CCCCCCCcCHHHHHHHHHHHhCcc
Confidence 65 4899999999999665322110 00 0 0011111111 111235789999999999988543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|.++++.++
T Consensus 234 ~~~----------------~~g~~~~~~gg 247 (251)
T PRK07231 234 ASW----------------ITGVTLVVDGG 247 (251)
T ss_pred ccC----------------CCCCeEEECCC
Confidence 221 24777888766
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.06 E-value=4.9e-09 Score=104.72 Aligned_cols=166 Identities=11% Similarity=0.031 Sum_probs=112.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHH-h
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLAT-R 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~-~ 341 (596)
.++.++.+|++++.. +..++ .++|+|||+||.... ...+...+.+|+.|+.+|++++. .
T Consensus 59 ~~~~~~~~Dl~~~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (249)
T PRK12827 59 GKALGLAFDVRDFAA------TRAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPP 132 (249)
T ss_pred CcEEEEEccCCCHHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 468899999997643 44443 358999999997641 12345578999999999999998 1
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||...+.... ....|+.+|++.+.+++.
T Consensus 133 ~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~y~~sK~a~~~~~~~ 173 (249)
T PRK12827 133 MIRARRGGRIVNIASVAGVRGNR---------------------------------------GQVNYAASKAGLIGLTKT 173 (249)
T ss_pred HHhcCCCeEEEEECCchhcCCCC---------------------------------------CCchhHHHHHHHHHHHHH
Confidence 13567899999987654211 124599999999988877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .+++++++|||+|.++..... .+.. .+.. ..+ ...+.+++|+|++++.++...
T Consensus 174 l~~~~~~~~i~~~~i~pg~v~t~~~~~~--------~~~~---~~~~----~~~-----~~~~~~~~~va~~~~~l~~~~ 233 (249)
T PRK12827 174 LANELAPRGITVNAVAPGAINTPMADNA--------APTE---HLLN----PVP-----VQRLGEPDEVAALVAFLVSDA 233 (249)
T ss_pred HHHHhhhhCcEEEEEEECCcCCCccccc--------chHH---HHHh----hCC-----CcCCcCHHHHHHHHHHHcCcc
Confidence 65 489999999999988643210 0111 1111 011 112568899999988887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.++
T Consensus 234 ~~~----------------~~g~~~~~~~g 247 (249)
T PRK12827 234 ASY----------------VTGQVIPVDGG 247 (249)
T ss_pred cCC----------------ccCcEEEeCCC
Confidence 221 35788998776
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=9.9e-09 Score=104.25 Aligned_cols=117 Identities=15% Similarity=0.197 Sum_probs=88.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.+++++.+|++++. .+..++. .+|+||||||...+. ..+..++.+|+.|+.++++++..
T Consensus 45 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~g~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~ 118 (270)
T PRK06179 45 PGVELLELDVTDDA------SVQAAVDEVIARAGRIDVLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPH 118 (270)
T ss_pred CCCeeEEeecCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999754 3555554 469999999975421 23466889999999999988643
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||.+.+.... ....|+.||+..+.++...
T Consensus 119 ~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 159 (270)
T PRK06179 119 MRAQGSGRIINISSVLGFLPAP---------------------------------------YMALYAASKHAVEGYSESL 159 (270)
T ss_pred HHhcCCceEEEECCccccCCCC---------------------------------------CccHHHHHHHHHHHHHHHH
Confidence 14678999999976543210 2246999999999998775
Q ss_pred h-----cCCCEEEecCCccccCCC
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWK 438 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~ 438 (596)
. .|+++++++||.|.++..
T Consensus 160 ~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 160 DHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred HHHHhhhCcEEEEEeCCCcccccc
Confidence 4 699999999999987643
|
|
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=5e-09 Score=106.72 Aligned_cols=165 Identities=15% Similarity=0.182 Sum_probs=101.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHH----H
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLD----L 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~----~ 338 (596)
.++.++.+|++++. .+..++. ++|+|||+|+...+. ..+...+.+|+.|+..++. .
T Consensus 46 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~ 119 (273)
T PRK06182 46 LGVHPLSLDVTDEA------SIKAAVDTIIAEEGRIDVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPH 119 (273)
T ss_pred CCCeEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHH
Confidence 35788999999754 3555544 689999999975432 2345688999999655555 4
Q ss_pred HHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 339 ATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 339 a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
+.. .+..+||++||.+...... ....|+.||++.+.++..
T Consensus 120 ~~~-~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~ 159 (273)
T PRK06182 120 MRA-QRSGRIINISSMGGKIYTP---------------------------------------LGAWYHATKFALEGFSDA 159 (273)
T ss_pred HHh-cCCCEEEEEcchhhcCCCC---------------------------------------CccHhHHHHHHHHHHHHH
Confidence 444 3567899999976432100 224599999999998765
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCC-CC-CCcHH-HHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSN-NL-YGPGG-AAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~-~~-~~~~~-l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
++ .|++++++|||.|.++.......... .. ..... ....+.. .+ ........+...++||++++.++
T Consensus 160 l~~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~~~~~~~~~~vA~~i~~~~ 234 (273)
T PRK06182 160 LRLEVAPFGIDVVVIEPGGIKTEWGDIAADHLLKTSGNGAYAEQAQAVAA-SM----RSTYGSGRLSDPSVIADAISKAV 234 (273)
T ss_pred HHHHhcccCCEEEEEecCCcccccchhhhhhhcccccccchHHHHHHHHH-HH----HHhhccccCCCHHHHHHHHHHHH
Confidence 43 68999999999997764310000000 00 00000 0000100 01 01112335789999999999998
Q ss_pred Hh
Q psy5825 491 WK 492 (596)
Q Consensus 491 ~~ 492 (596)
..
T Consensus 235 ~~ 236 (273)
T PRK06182 235 TA 236 (273)
T ss_pred hC
Confidence 64
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.05 E-value=5.9e-09 Score=105.41 Aligned_cols=154 Identities=11% Similarity=0.144 Sum_probs=104.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..++. .+|+|||||+..... ..+...+.+|+.|+.+|++.+..
T Consensus 50 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~ 123 (263)
T PRK06181 50 GEALVVPTDVSDAE------ACERLIEAAVARFGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALP 123 (263)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 57889999999754 2444443 689999999975421 11345789999999999999863
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
. .+..+||++||...+.... ....|+.||++.+.++..+
T Consensus 124 ~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~~~~~~~~~l 164 (263)
T PRK06181 124 HLKASRGQIVVVSSLAGLTGVP---------------------------------------TRSGYAASKHALHGFFDSL 164 (263)
T ss_pred HHHhcCCEEEEEecccccCCCC---------------------------------------CccHHHHHHHHHHHHHHHH
Confidence 1 2457899999987664210 1246999999999998765
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
. .++.+++++||.|..+..... .. ..+.. ....+....++++++|+|++++.++..
T Consensus 165 ~~~~~~~~i~~~~i~pg~v~t~~~~~~-------~~--------~~~~~--~~~~~~~~~~~~~~~dva~~i~~~~~~ 225 (263)
T PRK06181 165 RIELADDGVAVTVVCPGFVATDIRKRA-------LD--------GDGKP--LGKSPMQESKIMSAEECAEAILPAIAR 225 (263)
T ss_pred HHHhhhcCceEEEEecCccccCcchhh-------cc--------ccccc--cccccccccCCCCHHHHHHHHHHHhhC
Confidence 4 689999999999876532110 00 00110 000111223789999999999988853
|
|
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=1.8e-09 Score=124.05 Aligned_cols=176 Identities=16% Similarity=0.138 Sum_probs=115.8
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
++.++.+|++++. .+..++ .++|+|||+||.... ...+...+.+|+.|+.+++++|...
T Consensus 471 ~v~~v~~Dvtd~~------~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l 544 (681)
T PRK08324 471 RALGVACDVTDEA------AVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIM 544 (681)
T ss_pred cEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 7889999999754 244443 368999999996532 1234567899999999998888641
Q ss_pred --CCC-ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 --SQL-KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 --~~v-krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+. .+||++||..++.... ....|+.||+..+.+++.+
T Consensus 545 ~~~~~~g~iV~vsS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 585 (681)
T PRK08324 545 KAQGLGGSIVFIASKNAVNPGP---------------------------------------NFGAYGAAKAAELHLVRQL 585 (681)
T ss_pred HhcCCCcEEEEECCccccCCCC---------------------------------------CcHHHHHHHHHHHHHHHHH
Confidence 232 6899999986543210 1246999999999999887
Q ss_pred h-----cCCCEEEecCCccc-cCCCCCccccCCCCCCcHHHHHHHHhccce----EeecCCCCccccccHHHHHHHHHHH
Q psy5825 420 L-----YKLPLAMVRPSIVV-STWKEPIVGWSNNLYGPGGAAAGAALGLIH----TFYAKHDKKCDLIPVDVATNMMLGV 489 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~-G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~----~~~~~~~~~~d~ipVDdva~aii~~ 489 (596)
+ .|+++++++|+.|| +..... .+|. .......|... .++..+.....+++++|+|++++.+
T Consensus 586 a~e~~~~gIrvn~v~Pg~v~~~t~~~~-~~~~--------~~~~~~~g~~~~~~~~~~~~~~~l~~~v~~~DvA~a~~~l 656 (681)
T PRK08324 586 ALELGPDGIRVNGVNPDAVVRGSGIWT-GEWI--------EARAAAYGLSEEELEEFYRARNLLKREVTPEDVAEAVVFL 656 (681)
T ss_pred HHHhcccCeEEEEEeCceeecCCcccc-chhh--------hhhhhhccCChHHHHHHHHhcCCcCCccCHHHHHHHHHHH
Confidence 5 57999999999998 532100 1110 00011111110 1223344556899999999999988
Q ss_pred HHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 490 VWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
+...... ..|.+|++.+|
T Consensus 657 ~s~~~~~----------------~tG~~i~vdgG 674 (681)
T PRK08324 657 ASGLLSK----------------TTGAIITVDGG 674 (681)
T ss_pred hCccccC----------------CcCCEEEECCC
Confidence 7422111 35889999988
|
|
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=99.05 E-value=7.3e-09 Score=103.88 Aligned_cols=178 Identities=17% Similarity=0.125 Sum_probs=114.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+|+..... ..+...+.+|+.|+.++++++...
T Consensus 48 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (252)
T PRK08220 48 YPFATFVLDVSDAA------AVAQVCQRLLAETGPLDVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQ 121 (252)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56889999998654 3555544 379999999975421 245568899999999999998631
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||........ ....|+.||+..+.+++.+
T Consensus 122 ~~~~~~g~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 162 (252)
T PRK08220 122 FRRQRSGAIVTVGSNAAHVPRI---------------------------------------GMAAYGASKAALTSLAKCV 162 (252)
T ss_pred HHhCCCCEEEEECCchhccCCC---------------------------------------CCchhHHHHHHHHHHHHHH
Confidence 2345899999976543110 1246999999999999776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+++++||.|+++..... |. ........+..... .+. .......+++++|+|++++.++....
T Consensus 163 a~e~~~~~i~v~~i~pg~v~t~~~~~~--~~-~~~~~~~~~~~~~~-~~~----~~~~~~~~~~~~dva~~~~~l~~~~~ 234 (252)
T PRK08220 163 GLELAPYGVRCNVVSPGSTDTDMQRTL--WV-DEDGEQQVIAGFPE-QFK----LGIPLGKIARPQEIANAVLFLASDLA 234 (252)
T ss_pred HHHhhHhCeEEEEEecCcCcchhhhhh--cc-chhhhhhhhhhHHH-HHh----hcCCCcccCCHHHHHHHHHHHhcchh
Confidence 5 689999999999988753211 00 00000001100000 000 01123468999999999999885432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|.+..+.++
T Consensus 235 ~~----------------~~g~~i~~~gg 247 (252)
T PRK08220 235 SH----------------ITLQDIVVDGG 247 (252)
T ss_pred cC----------------ccCcEEEECCC
Confidence 21 35677777766
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.03 E-value=4.6e-09 Score=105.08 Aligned_cols=170 Identities=14% Similarity=0.119 Sum_probs=110.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh----h----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF----D----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~----~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|+++.. .+..++. .+|+|||+|+.... . ..+...+.+|+.|+.++++++..
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06123 52 GEALAVAADVADEA------DVLRLFEAVDRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVK 125 (248)
T ss_pred CcEEEEEeccCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46788999999754 3444443 57999999987531 1 23446789999999999988865
Q ss_pred cC------CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 342 CS------QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 342 ~~------~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
.- ...+||++||.+.+.... + ....|+.+|+..+.+
T Consensus 126 ~~~~~~~~~~g~iv~~sS~~~~~~~~------------------------------------~--~~~~Y~~sKaa~~~~ 167 (248)
T PRK06123 126 RMSTRHGGRGGAIVNVSSMAARLGSP------------------------------------G--EYIDYAASKGAIDTM 167 (248)
T ss_pred HHHhcCCCCCeEEEEECchhhcCCCC------------------------------------C--CccchHHHHHHHHHH
Confidence 20 123699999976532100 0 112499999999999
Q ss_pred HHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 416 VEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 416 v~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
+..++ +|++++++|||.|+|+.... ......+.. ..+.. +. .-+..++|++++++.++
T Consensus 168 ~~~la~~~~~~~i~v~~i~pg~v~~~~~~~--------~~~~~~~~~-~~~~~---p~-----~~~~~~~d~a~~~~~l~ 230 (248)
T PRK06123 168 TIGLAKEVAAEGIRVNAVRPGVIYTEIHAS--------GGEPGRVDR-VKAGI---PM-----GRGGTAEEVARAILWLL 230 (248)
T ss_pred HHHHHHHhcccCeEEEEEecCcccCchhhc--------cCCHHHHHH-HHhcC---CC-----CCCcCHHHHHHHHHHHh
Confidence 88765 58999999999999974311 011122211 11111 11 11246899999999877
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|.+|++.++
T Consensus 231 ~~~~~~----------------~~g~~~~~~gg 247 (248)
T PRK06123 231 SDEASY----------------TTGTFIDVSGG 247 (248)
T ss_pred CccccC----------------ccCCEEeecCC
Confidence 543211 35789998765
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=1.4e-08 Score=104.65 Aligned_cols=169 Identities=13% Similarity=0.071 Sum_probs=114.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|+++... +..++. .+|+|||+|+..... ..+...+.+|+.|+.++++++..
T Consensus 96 ~~~~~~~~Dl~~~~~------~~~~~~~i~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~ 169 (290)
T PRK06701 96 VKCLLIPGDVSDEAF------CKDAVEETVRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALP 169 (290)
T ss_pred CeEEEEEccCCCHHH------HHHHHHHHHHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 468899999997542 444433 579999999974321 23355789999999999999975
Q ss_pred c-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 C-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 ~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
. ....+||++||..++.... ....|+.||++.+.++..++
T Consensus 170 ~~~~~g~iV~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~l~~~la 210 (290)
T PRK06701 170 HLKQGSAIINTGSITGYEGNE---------------------------------------TLIDYSATKGAIHAFTRSLA 210 (290)
T ss_pred HHhhCCeEEEEecccccCCCC---------------------------------------CcchhHHHHHHHHHHHHHHH
Confidence 2 2235899999988765311 11359999999999988876
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+++++++||.|+.+... + .. ....+..+.. ......+..++|+|++++.++.....
T Consensus 211 ~~~~~~gIrv~~i~pG~v~T~~~~---~---~~--~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~ll~~~~~ 273 (290)
T PRK06701 211 QSLVQKGIRVNAVAPGPIWTPLIP---S---DF--DEEKVSQFGS---------NTPMQRPGQPEELAPAYVFLASPDSS 273 (290)
T ss_pred HHhhhcCeEEEEEecCCCCCcccc---c---cc--CHHHHHHHHh---------cCCcCCCcCHHHHHHHHHHHcCcccC
Confidence 4899999999999876321 1 00 1111111111 11224578899999999998765322
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|.+|++.++
T Consensus 274 ~----------------~~G~~i~idgg 285 (290)
T PRK06701 274 Y----------------ITGQMLHVNGG 285 (290)
T ss_pred C----------------ccCcEEEeCCC
Confidence 1 35788888776
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=99.02 E-value=4.4e-09 Score=105.23 Aligned_cols=169 Identities=12% Similarity=0.044 Sum_probs=113.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+.+|++++...
T Consensus 56 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (250)
T PRK12939 56 GRAHAIAADLADPA------SVQRFFDAAAAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPH 129 (250)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46899999999754 244444 358999999997532 1234557889999999999998642
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.+|+..+.+++.+
T Consensus 130 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~y~~sK~~~~~~~~~l 170 (250)
T PRK12939 130 LRDSGRGRIVNLASDTALWGAP---------------------------------------KLGAYVASKGAVIGMTRSL 170 (250)
T ss_pred HHHcCCeEEEEECchhhccCCC---------------------------------------CcchHHHHHHHHHHHHHHH
Confidence 2245899999976543210 1135999999999999876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .++.+++++||.|..+..... . ...+...+.. ......+++++|+|++++.++....
T Consensus 171 ~~~~~~~~i~v~~v~pg~v~t~~~~~~-------~-~~~~~~~~~~---------~~~~~~~~~~~dva~~~~~l~~~~~ 233 (250)
T PRK12939 171 ARELGGRGITVNAIAPGLTATEATAYV-------P-ADERHAYYLK---------GRALERLQVPDDVAGAVLFLLSDAA 233 (250)
T ss_pred HHHHhhhCEEEEEEEECCCCCcccccc-------C-ChHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCccc
Confidence 5 579999999998866532110 0 0111111111 1123457899999999999886432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.++
T Consensus 234 ~~----------------~~G~~i~~~gg 246 (250)
T PRK12939 234 RF----------------VTGQLLPVNGG 246 (250)
T ss_pred cC----------------ccCcEEEECCC
Confidence 21 35888998876
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=99.01 E-value=2.3e-08 Score=99.60 Aligned_cols=167 Identities=12% Similarity=0.089 Sum_probs=109.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..+++ .+|+|||+|+..... ..+...+.+|+.|+.++++++...
T Consensus 55 ~~~~~~~~Dl~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (248)
T PRK05557 55 GKALAVQGDVSDAES------VERAVDEAKAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARP 128 (248)
T ss_pred CceEEEEcCCCCHHH------HHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 578899999997542 444433 589999999975321 234457889999999999998752
Q ss_pred ---CCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+..+|||+||.+. +|.. ....|+.+|.+.+.+++.
T Consensus 129 ~~~~~~~~~v~iss~~~~~~~~----------------------------------------~~~~y~~sk~a~~~~~~~ 168 (248)
T PRK05557 129 MMKQRSGRIINISSVVGLMGNP----------------------------------------GQANYAASKAGVIGFTKS 168 (248)
T ss_pred HHhcCCeEEEEEcccccCcCCC----------------------------------------CCchhHHHHHHHHHHHHH
Confidence 24568999999743 3310 124599999999988876
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .++.+++++||.+.++...+ ....+...+..+ .+ ...+++++|+|++++.++...
T Consensus 169 ~a~~~~~~~i~~~~v~pg~~~~~~~~~---------~~~~~~~~~~~~----~~-----~~~~~~~~~va~~~~~l~~~~ 230 (248)
T PRK05557 169 LARELASRGITVNAVAPGFIETDMTDA---------LPEDVKEAILAQ----IP-----LGRLGQPEEIASAVAFLASDE 230 (248)
T ss_pred HHHHhhhhCeEEEEEecCccCCccccc---------cChHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHcCcc
Confidence 54 58999999999885542211 011121111111 11 123678999999988776442
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.++
T Consensus 231 ~~~----------------~~g~~~~i~~~ 244 (248)
T PRK05557 231 AAY----------------ITGQTLHVNGG 244 (248)
T ss_pred cCC----------------ccccEEEecCC
Confidence 110 35789999876
|
|
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=2.5e-08 Score=99.34 Aligned_cols=167 Identities=11% Similarity=0.040 Sum_probs=110.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHH---
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLA--- 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a--- 339 (596)
.++.++.+|+++... +..++ ..+|+|||+|+.... ...+..++.+|+.|+.+|+..+
T Consensus 52 ~~~~~~~~D~~~~~~------v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (245)
T PRK12824 52 DQVRLKELDVTDTEE------CAEALAEIEEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAA 125 (245)
T ss_pred CeEEEEEcCCCCHHH------HHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 568999999997542 44433 248999999997531 1234557899999999986654
Q ss_pred -HhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 340 -TRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 340 -~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.. ....+||++||...++... ....|+.+|++.+.+++.
T Consensus 126 ~~~-~~~~~iv~iss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 165 (245)
T PRK12824 126 MCE-QGYGRIINISSVNGLKGQF---------------------------------------GQTNYSAAKAGMIGFTKA 165 (245)
T ss_pred HHH-hCCeEEEEECChhhccCCC---------------------------------------CChHHHHHHHHHHHHHHH
Confidence 33 3567999999987654210 113599999999888877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.+.++..... ...+...+.. . .....+..+++++++++.++...
T Consensus 166 l~~~~~~~~i~v~~v~pg~~~t~~~~~~---------~~~~~~~~~~-~--------~~~~~~~~~~~va~~~~~l~~~~ 227 (245)
T PRK12824 166 LASEGARYGITVNCIAPGYIATPMVEQM---------GPEVLQSIVN-Q--------IPMKRLGTPEEIAAAVAFLVSEA 227 (245)
T ss_pred HHHHHHHhCeEEEEEEEcccCCcchhhc---------CHHHHHHHHh-c--------CCCCCCCCHHHHHHHHHHHcCcc
Confidence 64 589999999999977543111 1111111111 1 11223567899999998877432
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|+++++.++
T Consensus 228 ~~~----------------~~G~~~~~~~g 241 (245)
T PRK12824 228 AGF----------------ITGETISINGG 241 (245)
T ss_pred ccC----------------ccCcEEEECCC
Confidence 210 35889999887
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.99 E-value=1.5e-08 Score=100.96 Aligned_cols=146 Identities=15% Similarity=0.167 Sum_probs=102.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ ++|+|||+|+..... ......+.+|+.|+.+|++++...
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 129 (239)
T PRK07666 56 VKVVIATADVSDYE------EVTAAIEQLKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPS 129 (239)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999998754 3444443 689999999874321 234567899999999999888631
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..++|++||...+.... ....|+.+|++.+.++..+
T Consensus 130 ~~~~~~~~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~~ 170 (239)
T PRK07666 130 MIERQSGDIINISSTAGQKGAA---------------------------------------VTSAYSASKFGVLGLTESL 170 (239)
T ss_pred HHhCCCcEEEEEcchhhccCCC---------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 3467899999977543210 1245999999999888765
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|++++++|||.|.++.... . + +.. .....++..+|+|++++.++..
T Consensus 171 a~e~~~~gi~v~~v~pg~v~t~~~~~-------~------------~----~~~--~~~~~~~~~~~~a~~~~~~l~~ 223 (239)
T PRK07666 171 MQEVRKHNIRVTALTPSTVATDMAVD-------L------------G----LTD--GNPDKVMQPEDLAEFIVAQLKL 223 (239)
T ss_pred HHHhhccCcEEEEEecCcccCcchhh-------c------------c----ccc--cCCCCCCCHHHHHHHHHHHHhC
Confidence 4 58999999999997653210 0 0 000 0112468899999999998864
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=2.2e-08 Score=99.37 Aligned_cols=146 Identities=16% Similarity=0.160 Sum_probs=100.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++. .+|+|||+|+...+ ...+...+.+|+.|+.+++++|...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (237)
T PRK07326 54 GNVLGLAADVRDEA------DVQRAVDAIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPA 127 (237)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 46889999998754 2444433 68999999987532 1234567899999999999988642
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..+||++||.+.+.... ....|+.+|+..+.+++.+.
T Consensus 128 ~~~~~~~iv~~ss~~~~~~~~---------------------------------------~~~~y~~sk~a~~~~~~~~~ 168 (237)
T PRK07326 128 LKRGGGYIINISSLAGTNFFA---------------------------------------GGAAYNASKFGLVGFSEAAM 168 (237)
T ss_pred HHHCCeEEEEECChhhccCCC---------------------------------------CCchHHHHHHHHHHHHHHHH
Confidence 2456899999976543210 12459999999888887754
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
.|++++++|||.+..+... ... . .....++..+|++.+++.++..+.
T Consensus 169 ~~~~~~gi~v~~v~pg~~~t~~~~-------~~~------------------~--~~~~~~~~~~d~a~~~~~~l~~~~ 220 (237)
T PRK07326 169 LDLRQYGIKVSTIMPGSVATHFNG-------HTP------------------S--EKDAWKIQPEDIAQLVLDLLKMPP 220 (237)
T ss_pred HHhcccCcEEEEEeeccccCcccc-------ccc------------------c--hhhhccCCHHHHHHHHHHHHhCCc
Confidence 6899999999998664210 000 0 000113778999999999986543
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=98.98 E-value=1.2e-08 Score=104.70 Aligned_cols=112 Identities=13% Similarity=0.101 Sum_probs=77.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHH--
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLAT-- 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~-- 340 (596)
.++.++.+|++++. ++..+++ .+|+|||+||..... ..+...+.+|+.|+.++++++.
T Consensus 55 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 128 (287)
T PRK06194 55 AEVLGVRTDVSDAA------QVEALADAALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPL 128 (287)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 46888999999754 3555554 479999999986431 2334578999999999888753
Q ss_pred --hcCC-----CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHH
Q psy5825 341 --RCSQ-----LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413 (596)
Q Consensus 341 --~~~~-----vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE 413 (596)
+... ..+||++||++.+.... ....|+.||++.+
T Consensus 129 ~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~ 169 (287)
T PRK06194 129 MLAAAEKDPAYEGHIVNTASMAGLLAPP---------------------------------------AMGIYNVSKHAVV 169 (287)
T ss_pred HHhcCCCCCCCCeEEEEeCChhhccCCC---------------------------------------CCcchHHHHHHHH
Confidence 2111 15899999987764211 1245999999999
Q ss_pred HHHHHHh--c-----CCCEEEecCCcc
Q psy5825 414 SVVEKYL--Y-----KLPLAMVRPSIV 433 (596)
Q Consensus 414 ~lv~~~~--~-----gl~~~IlRp~~V 433 (596)
.++..++ . ++.+.++.||.|
T Consensus 170 ~~~~~l~~e~~~~~~~irv~~v~pg~i 196 (287)
T PRK06194 170 SLTETLYQDLSLVTDQVGASVLCPYFV 196 (287)
T ss_pred HHHHHHHHHHhhcCCCeEEEEEEeCcc
Confidence 9998765 2 355556666555
|
|
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.2e-08 Score=101.57 Aligned_cols=160 Identities=12% Similarity=0.065 Sum_probs=107.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCcc-CCh-------hhhHHHHHHHHHHHHHHHHHHHHhc---
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAAS-LRF-------DELIQDAFTLNIQATRELLDLATRC--- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~-v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~--- 342 (596)
.++.++.+|++++. .+..++. .+|+|||+|+. ... ...+...+.+|+.|+.+|++++...
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 122 (238)
T PRK08264 49 PRVVPLQLDVTDPA------SVAAAAEAASDVTILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLAA 122 (238)
T ss_pred CceEEEEecCCCHH------HHHHHHHhcCCCCEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 57889999999754 3555554 58999999997 221 1234557889999999999997631
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
.+..+||++||...+.... ....|+.+|.+++.++..++
T Consensus 123 ~~~~~~v~~sS~~~~~~~~---------------------------------------~~~~y~~sK~a~~~~~~~l~~~ 163 (238)
T PRK08264 123 NGGGAIVNVLSVLSWVNFP---------------------------------------NLGTYSASKAAAWSLTQALRAE 163 (238)
T ss_pred cCCCEEEEEcChhhccCCC---------------------------------------CchHhHHHHHHHHHHHHHHHHH
Confidence 3457899999987654211 22469999999999988765
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.+++++++|||.|.++.....++. ...+..+...+..+.. ...+.+.++++++.++.+...
T Consensus 164 ~~~~~i~~~~v~pg~v~t~~~~~~~~~---~~~~~~~a~~~~~~~~--------~~~~~i~~~~~~~~~~~~~~~ 227 (238)
T PRK08264 164 LAPQGTRVLGVHPGPIDTDMAAGLDAP---KASPADVARQILDALE--------AGDEEVLPDEMARQVKAALSA 227 (238)
T ss_pred hhhcCeEEEEEeCCcccccccccCCcC---CCCHHHHHHHHHHHHh--------CCCCeEeccHHHHHHHHHhhc
Confidence 489999999999987653222111 1112222222222111 123578888999988888654
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=2.4e-08 Score=100.38 Aligned_cols=173 Identities=10% Similarity=0.056 Sum_probs=108.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh----------hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF----------DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~----------~~~~~~~~~~NV~GT~~LL~~a 339 (596)
..+.++.+|++++. ++..+++ .+|+|||||+.... ...+...+.+|+.|+..+++++
T Consensus 55 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 128 (256)
T PRK09186 55 KKLSLVELDITDQE------SLEEFLSKSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQF 128 (256)
T ss_pred CceeEEEecCCCHH------HHHHHHHHHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHH
Confidence 35678899999764 3555544 38999999975321 1234557888998888777766
Q ss_pred Hhc---CCCceEEEecCcccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 340 TRC---SQLKAILHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 340 ~~~---~~vkrfV~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
... .+..+||++||++.+.... .+.+. .+ .. .+..|+.||+..+.+
T Consensus 129 ~~~~~~~~~~~iv~~sS~~~~~~~~~~~~~~--------------------------~~---~~-~~~~Y~~sK~a~~~l 178 (256)
T PRK09186 129 AKYFKKQGGGNLVNISSIYGVVAPKFEIYEG--------------------------TS---MT-SPVEYAAIKAGIIHL 178 (256)
T ss_pred HHHHHhcCCceEEEEechhhhccccchhccc--------------------------cc---cC-CcchhHHHHHHHHHH
Confidence 541 3557999999977543211 00000 00 00 123699999999999
Q ss_pred HHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 416 VEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 416 v~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
++.+. .++.+++++||.+++.. ...+... .... .+ ...+++++|+|++++.++
T Consensus 179 ~~~la~e~~~~~i~v~~i~Pg~~~~~~-------------~~~~~~~-~~~~---~~-----~~~~~~~~dva~~~~~l~ 236 (256)
T PRK09186 179 TKYLAKYFKDSNIRVNCVSPGGILDNQ-------------PEAFLNA-YKKC---CN-----GKGMLDPDDICGTLVFLL 236 (256)
T ss_pred HHHHHHHhCcCCeEEEEEecccccCCC-------------CHHHHHH-HHhc---CC-----ccCCCCHHHhhhhHhhee
Confidence 86544 57999999999886531 1122111 1111 11 124789999999999988
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|.++++.++
T Consensus 237 ~~~~~~----------------~~g~~~~~~~g 253 (256)
T PRK09186 237 SDQSKY----------------ITGQNIIVDDG 253 (256)
T ss_pred cccccc----------------ccCceEEecCC
Confidence 643221 35778887766
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.97 E-value=1.6e-08 Score=101.97 Aligned_cols=169 Identities=9% Similarity=0.087 Sum_probs=111.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+++.. .+..++ ..+|+|||||+.... ...+..++++|+.|+.+|++++...
T Consensus 59 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (258)
T PRK09134 59 RRAVALQADLADEA------EVRALVARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARA 132 (258)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 56889999999754 244443 347999999986432 1234568899999999999988752
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.....+|++||...+.... ....|+.||...|.+++.+
T Consensus 133 ~~~~~~~~iv~~~s~~~~~~~p---------------------------------------~~~~Y~~sK~a~~~~~~~l 173 (258)
T PRK09134 133 LPADARGLVVNMIDQRVWNLNP---------------------------------------DFLSYTLSKAALWTATRTL 173 (258)
T ss_pred HHhcCCceEEEECchhhcCCCC---------------------------------------CchHHHHHHHHHHHHHHHH
Confidence 1235788887765433100 1146999999999999887
Q ss_pred h----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 420 L----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 420 ~----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
+ .++.+++++||.|..... . ....+.....+. + ......++|+|++++.++....
T Consensus 174 a~~~~~~i~v~~i~PG~v~t~~~----------~-~~~~~~~~~~~~----~-----~~~~~~~~d~a~~~~~~~~~~~- 232 (258)
T PRK09134 174 AQALAPRIRVNAIGPGPTLPSGR----------Q-SPEDFARQHAAT----P-----LGRGSTPEEIAAAVRYLLDAPS- 232 (258)
T ss_pred HHHhcCCcEEEEeecccccCCcc----------c-ChHHHHHHHhcC----C-----CCCCcCHHHHHHHHHHHhcCCC-
Confidence 6 358999999998865311 0 011111211111 1 1124779999999999986432
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccH
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITW 530 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~ 530 (596)
..|++|++.++ ..++|
T Consensus 233 -----------------~~g~~~~i~gg--~~~~~ 248 (258)
T PRK09134 233 -----------------VTGQMIAVDGG--QHLAW 248 (258)
T ss_pred -----------------cCCCEEEECCC--eeccc
Confidence 25789998887 44544
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.96 E-value=4.8e-08 Score=100.86 Aligned_cols=170 Identities=14% Similarity=0.060 Sum_probs=111.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC----h----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR----F----DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~----~----~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++.. +..++ ..+|++||+|+... + ...+...+++|+.|+.++++++..
T Consensus 100 ~~~~~~~~Dl~~~~~------~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 173 (294)
T PRK07985 100 RKAVLLPGDLSDEKF------ARSLVHEAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIP 173 (294)
T ss_pred CeEEEEEccCCCHHH------HHHHHHHHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 467889999997542 33332 35799999998632 1 123456889999999999999875
Q ss_pred c-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 C-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 ~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
. ....+||++||+.++.... ....|+.||+..+.++..++
T Consensus 174 ~m~~~g~iv~iSS~~~~~~~~---------------------------------------~~~~Y~asKaal~~l~~~la 214 (294)
T PRK07985 174 LLPKGASIITTSSIQAYQPSP---------------------------------------HLLDYAATKAAILNYSRGLA 214 (294)
T ss_pred hhhcCCEEEEECCchhccCCC---------------------------------------CcchhHHHHHHHHHHHHHHH
Confidence 2 2235899999988764211 12459999999998887765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+++++++||+|.++.... + ......+..+.. . .+ ...+...+|+|++++.++.....
T Consensus 215 ~el~~~gIrvn~i~PG~v~t~~~~~--~-----~~~~~~~~~~~~-~---~~-----~~r~~~pedva~~~~fL~s~~~~ 278 (294)
T PRK07985 215 KQVAEKGIRVNIVAPGPIWTALQIS--G-----GQTQDKIPQFGQ-Q---TP-----MKRAGQPAELAPVYVYLASQESS 278 (294)
T ss_pred HHHhHhCcEEEEEECCcCccccccc--c-----CCCHHHHHHHhc-c---CC-----CCCCCCHHHHHHHHHhhhChhcC
Confidence 58999999999998874310 0 001122111111 1 11 11355688999999988754322
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|.++++.++
T Consensus 279 ~----------------itG~~i~vdgG 290 (294)
T PRK07985 279 Y----------------VTAEVHGVCGG 290 (294)
T ss_pred C----------------ccccEEeeCCC
Confidence 1 35778888776
|
|
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.95 E-value=6.1e-08 Score=96.70 Aligned_cols=169 Identities=15% Similarity=0.076 Sum_probs=110.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ ++|+|||+|+.... ...+...+.+|+.|+.+++.++...
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 128 (245)
T PRK12937 55 GRAIAVQADVADAA------AVTRLFDAAETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARH 128 (245)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHH
Confidence 57899999999754 3444444 58999999997542 1234567899999999999988752
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....+||++||...+.... ..+.|+.+|...+.+++.++
T Consensus 129 ~~~~~~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~~a~ 169 (245)
T PRK12937 129 LGQGGRIINLSTSVIALPLP---------------------------------------GYGPYAASKAAVEGLVHVLAN 169 (245)
T ss_pred hccCcEEEEEeeccccCCCC---------------------------------------CCchhHHHHHHHHHHHHHHHH
Confidence 2235899999876543210 12469999999999998765
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.++.+++++||.|-.+.. .+. . ...++..+.. .. + ..-+.+++|++++++.++......
T Consensus 170 ~~~~~~i~v~~i~pg~~~t~~~------~~~-~-~~~~~~~~~~-~~---~-----~~~~~~~~d~a~~~~~l~~~~~~~ 232 (245)
T PRK12937 170 ELRGRGITVNAVAPGPVATELF------FNG-K-SAEQIDQLAG-LA---P-----LERLGTPEEIAAAVAFLAGPDGAW 232 (245)
T ss_pred HhhhcCeEEEEEEeCCccCchh------ccc-C-CHHHHHHHHh-cC---C-----CCCCCCHHHHHHHHHHHcCccccC
Confidence 578999999998865421 000 0 1112211111 11 1 112457799999988887443211
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|.++++.++
T Consensus 233 ----------------~~g~~~~~~~g 243 (245)
T PRK12937 233 ----------------VNGQVLRVNGG 243 (245)
T ss_pred ----------------ccccEEEeCCC
Confidence 35788888765
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.95 E-value=1.5e-08 Score=102.08 Aligned_cols=120 Identities=10% Similarity=0.105 Sum_probs=85.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh---ccccEEEEcCccCChh---------hhHHHHHHHHHHHHHHHHHHHHhc--
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ---HHIHVIIHAAASLRFD---------ELIQDAFTLNIQATRELLDLATRC-- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~---~~vd~ViH~AA~v~~~---------~~~~~~~~~NV~GT~~LL~~a~~~-- 342 (596)
.++.++.+|++++.. + ...+..+. ..+|+|||+||..... ..+..++.+|+.|+.+|++++...
T Consensus 56 ~~~~~~~~Dl~~~~~-~-~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~ 133 (255)
T PRK05717 56 ENAWFIAMDVADEAQ-V-AAGVAEVLGQFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLR 133 (255)
T ss_pred CceEEEEccCCCHHH-H-HHHHHHHHHHhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 468899999997542 0 00122222 2479999999975321 224568899999999999999641
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
....+||++||...+.... ..+.|+.+|++.+.+++.++
T Consensus 134 ~~~g~ii~~sS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~la~~ 174 (255)
T PRK05717 134 AHNGAIVNLASTRARQSEP---------------------------------------DTEAYAASKGGLLALTHALAIS 174 (255)
T ss_pred HcCcEEEEEcchhhcCCCC---------------------------------------CCcchHHHHHHHHHHHHHHHHH
Confidence 2235899999976543210 12469999999999998876
Q ss_pred --cCCCEEEecCCccccCC
Q psy5825 421 --YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~ 437 (596)
.++.+++++||.|.++.
T Consensus 175 ~~~~i~v~~i~Pg~i~t~~ 193 (255)
T PRK05717 175 LGPEIRVNAVSPGWIDARD 193 (255)
T ss_pred hcCCCEEEEEecccCcCCc
Confidence 46899999999998863
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.94 E-value=9.3e-09 Score=103.40 Aligned_cols=169 Identities=12% Similarity=0.104 Sum_probs=111.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|+|||+|+...+. ..+...+.+|+.|+.+|++++...
T Consensus 61 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (255)
T PRK06841 61 GNAKGLVCDVSDSQ------SVEAAVAAVISAFGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRH 134 (255)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHH
Confidence 35678999998654 244443 3579999999975421 234457899999999999998642
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||........ ....|+.+|.+.+.+++.+
T Consensus 135 ~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 175 (255)
T PRK06841 135 MIAAGGGKIVNLASQAGVVALE---------------------------------------RHVAYCASKAGVVGMTKVL 175 (255)
T ss_pred HHhcCCceEEEEcchhhccCCC---------------------------------------CCchHHHHHHHHHHHHHHH
Confidence 2457999999986432100 1245999999999888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+++++||.|..+.... .| . ......+..+ ++ ...|.+++|+|++++.++....
T Consensus 176 a~e~~~~gi~v~~v~pg~v~t~~~~~--~~----~--~~~~~~~~~~----~~-----~~~~~~~~~va~~~~~l~~~~~ 238 (255)
T PRK06841 176 ALEWGPYGITVNAISPTVVLTELGKK--AW----A--GEKGERAKKL----IP-----AGRFAYPEEIAAAALFLASDAA 238 (255)
T ss_pred HHHHHhhCeEEEEEEeCcCcCccccc--cc----c--hhHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHcCccc
Confidence 5 58999999999996653210 01 0 0111111111 11 2357899999999998875432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.++
T Consensus 239 ~~----------------~~G~~i~~dgg 251 (255)
T PRK06841 239 AM----------------ITGENLVIDGG 251 (255)
T ss_pred cC----------------ccCCEEEECCC
Confidence 21 35788888776
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.92 E-value=6.6e-08 Score=96.66 Aligned_cols=158 Identities=13% Similarity=0.129 Sum_probs=100.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH-------hccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI-------QHHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l-------~~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+++... +..+ ...+|+|||+|+...+. ..+...+.+|+.|+.+|++++...
T Consensus 52 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (249)
T PRK06500 52 ESALVIRADAGDVAA------QKALAQALAEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPL 125 (249)
T ss_pred CceEEEEecCCCHHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 468889999986542 2222 24689999999975422 234568899999999999999741
Q ss_pred -CCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 -SQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
....++|++||... ++.. ..+.|+.+|++.|.+++.++
T Consensus 126 ~~~~~~~i~~~S~~~~~~~~----------------------------------------~~~~Y~~sK~a~~~~~~~la 165 (249)
T PRK06500 126 LANPASIVLNGSINAHIGMP----------------------------------------NSSVYAASKAALLSLAKTLS 165 (249)
T ss_pred HhcCCEEEEEechHhccCCC----------------------------------------CccHHHHHHHHHHHHHHHHH
Confidence 22356777777543 3310 12469999999999996654
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|++++++|||.++++..... | . .......+........ + ..-+..++++|++++.++..
T Consensus 166 ~e~~~~gi~v~~i~pg~~~t~~~~~~-~-~--~~~~~~~~~~~~~~~~---~-----~~~~~~~~~va~~~~~l~~~ 230 (249)
T PRK06500 166 GELLPRGIRVNAVSPGPVQTPLYGKL-G-L--PEATLDAVAAQIQALV---P-----LGRFGTPEEIAKAVLYLASD 230 (249)
T ss_pred HHhhhcCeEEEEEeeCcCCCHHHHhh-c-c--CccchHHHHHHHHhcC---C-----CCCCcCHHHHHHHHHHHcCc
Confidence 589999999999988632110 0 0 0001111111111111 1 11245889999999988753
|
|
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=6.3e-08 Score=97.71 Aligned_cols=119 Identities=11% Similarity=0.113 Sum_probs=85.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..++ ..+|+|||||+.... ...+...+++|+.|+.+|++++...
T Consensus 61 ~~~~~~~~Dl~d~~~------i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 134 (259)
T PRK08213 61 IDALWIAADVADEAD------IERLAEETLERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKR 134 (259)
T ss_pred CeEEEEEccCCCHHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHH
Confidence 468899999997653 43333 358999999996421 1234557889999999999988652
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+..+||++||...+...... . . ...+|+.+|++.+.+++.
T Consensus 135 ~l~~~~~~~~v~~sS~~~~~~~~~~--------------------------------~--~-~~~~Y~~sKa~~~~~~~~ 179 (259)
T PRK08213 135 SMIPRGYGRIINVASVAGLGGNPPE--------------------------------V--M-DTIAYNTSKGAVINFTRA 179 (259)
T ss_pred HHHhcCCeEEEEECChhhccCCCcc--------------------------------c--c-CcchHHHHHHHHHHHHHH
Confidence 245799999998665421100 0 0 124699999999999988
Q ss_pred Hh-----cCCCEEEecCCccccC
Q psy5825 419 YL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~ 436 (596)
++ .|+.+.+++|+.+-.+
T Consensus 180 ~a~~~~~~gi~v~~v~Pg~~~t~ 202 (259)
T PRK08213 180 LAAEWGPHGIRVNAIAPGFFPTK 202 (259)
T ss_pred HHHHhcccCEEEEEEecCcCCCc
Confidence 76 4799999999988554
|
|
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=2.9e-08 Score=100.15 Aligned_cols=117 Identities=16% Similarity=0.172 Sum_probs=83.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH-------hccccEEEEcCccCCh---------hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI-------QHHIHVIIHAAASLRF---------DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l-------~~~vd~ViH~AA~v~~---------~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++.- +..+ +..+|+|||+|+.... ...+...+.+|+.|+.+++.++.
T Consensus 49 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~ 122 (260)
T PRK06523 49 EGVEFVAADLTTAEG------CAAVARAVLERLGGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALL 122 (260)
T ss_pred CceeEEecCCCCHHH------HHHHHHHHHHHcCCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHH
Confidence 568899999997542 3332 2457999999995421 12355688999999988877664
Q ss_pred hc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 341 RC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 341 ~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
.. .+..+||++||...+.... . ....|+.||+..+.+++
T Consensus 123 ~~~~~~~~g~ii~isS~~~~~~~~-------------------------------------~-~~~~Y~~sK~a~~~l~~ 164 (260)
T PRK06523 123 PGMIARGSGVIIHVTSIQRRLPLP-------------------------------------E-STTAYAAAKAALSTYSK 164 (260)
T ss_pred HHHHhcCCcEEEEEecccccCCCC-------------------------------------C-CcchhHHHHHHHHHHHH
Confidence 31 2446899999987643200 0 12469999999999987
Q ss_pred HHh-----cCCCEEEecCCccccCC
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~ 437 (596)
.++ .|+.+++++||.|.++.
T Consensus 165 ~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 165 SLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred HHHHHHhhcCcEEEEEecCcccCcc
Confidence 765 58999999999998764
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1e-07 Score=96.93 Aligned_cols=154 Identities=17% Similarity=0.123 Sum_probs=99.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHH---
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLA--- 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a--- 339 (596)
.++.++.+|++++. ++..++ ..+|+|||+|+..... ..+...+.+|+.|+.++++.+
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~i~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (270)
T PRK05650 49 GDGFYQRCDVRDYS------QLTALAQACEEKWGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPL 122 (270)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 56889999998654 244443 3689999999976421 234557889999888877665
Q ss_pred -HhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 340 -TRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 340 -~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.. .+..+||++||..++.... ....|+.+|++.+.+...
T Consensus 123 ~~~-~~~~~iv~vsS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~ 162 (270)
T PRK05650 123 FKR-QKSGRIVNIASMAGLMQGP---------------------------------------AMSSYNVAKAGVVALSET 162 (270)
T ss_pred HHh-CCCCEEEEECChhhcCCCC---------------------------------------CchHHHHHHHHHHHHHHH
Confidence 33 3567999999987654211 124699999987766655
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .|+.+++++||.|..+..... ............+.+ ...+++++|||.+++.++..
T Consensus 163 l~~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~~~~---------~~~~~~~~~vA~~i~~~l~~ 225 (270)
T PRK05650 163 LLVELADDEIGVHVVCPSFFQTNLLDSF-------RGPNPAMKAQVGKLL---------EKSPITAADIADYIYQQVAK 225 (270)
T ss_pred HHHHhcccCcEEEEEecCccccCccccc-------ccCchhHHHHHHHHh---------hcCCCCHHHHHHHHHHHHhC
Confidence 54 689999999999977543211 100111111111000 11357899999999988853
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.91 E-value=1.1e-07 Score=94.14 Aligned_cols=167 Identities=11% Similarity=0.066 Sum_probs=107.3
Q ss_pred EEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---C
Q psy5825 280 HIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC---S 343 (596)
Q Consensus 280 ~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~---~ 343 (596)
.++.+|++++. .+..++. ++|+|||||+..... ..+...+.+|+.|+.+++.++... .
T Consensus 44 ~~~~~D~~~~~------~~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~ 117 (234)
T PRK07577 44 ELFACDLADIE------QTAATLAQINEIHPVDAIVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMKLR 117 (234)
T ss_pred eEEEeeCCCHH------HHHHHHHHHHHhCCCcEEEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 57789998754 2444443 579999999975431 234457889999998887776531 3
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
+..+||++||.++++.. ....|+.||...+.++..++
T Consensus 118 ~~~~iv~~sS~~~~~~~----------------------------------------~~~~Y~~sK~a~~~~~~~~a~e~ 157 (234)
T PRK07577 118 EQGRIVNICSRAIFGAL----------------------------------------DRTSYSAAKSALVGCTRTWALEL 157 (234)
T ss_pred CCcEEEEEccccccCCC----------------------------------------CchHHHHHHHHHHHHHHHHHHHH
Confidence 56799999998766421 12469999999999987754
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
.|+.++++|||.+..+... ............+.. ..+ ...+...+|+|.+++.++......
T Consensus 158 ~~~gi~v~~i~pg~~~t~~~~------~~~~~~~~~~~~~~~----~~~-----~~~~~~~~~~a~~~~~l~~~~~~~-- 220 (234)
T PRK07577 158 AEYGITVNAVAPGPIETELFR------QTRPVGSEEEKRVLA----SIP-----MRRLGTPEEVAAAIAFLLSDDAGF-- 220 (234)
T ss_pred HhhCcEEEEEecCcccCcccc------cccccchhHHHHHhh----cCC-----CCCCcCHHHHHHHHHHHhCcccCC--
Confidence 5899999999999765321 000000111111111 011 112457799999999887543211
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|.++++.++
T Consensus 221 --------------~~g~~~~~~g~ 231 (234)
T PRK07577 221 --------------ITGQVLGVDGG 231 (234)
T ss_pred --------------ccceEEEecCC
Confidence 35778888765
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=98.91 E-value=8.2e-09 Score=102.67 Aligned_cols=181 Identities=10% Similarity=0.087 Sum_probs=118.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
..++++.+|+.++ +.+..+++++|+||.+-+..+ ..-+....+|+++|.. .+|++|||.|-...
T Consensus 43 ~g~~vv~~d~~~~------~~l~~al~g~d~v~~~~~~~~---------~~~~~~~~~li~Aa~~-agVk~~v~ss~~~~ 106 (233)
T PF05368_consen 43 LGAEVVEADYDDP------ESLVAALKGVDAVFSVTPPSH---------PSELEQQKNLIDAAKA-AGVKHFVPSSFGAD 106 (233)
T ss_dssp TTTEEEES-TT-H------HHHHHHHTTCSEEEEESSCSC---------CCHHHHHHHHHHHHHH-HT-SEEEESEESSG
T ss_pred ccceEeecccCCH------HHHHHHHcCCceEEeecCcch---------hhhhhhhhhHHHhhhc-cccceEEEEEeccc
Confidence 4567889999854 559999999999999888654 1123446889999998 47999997555443
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCC-chHHHHHHHHHHHHHHHhcCCCEEEecCCcccc
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYN-NSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVS 435 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~-~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G 435 (596)
+..... . ++ ..+-..|+..|.++++. +++++++|+|+.+.
T Consensus 107 ~~~~~~------------------------------------~-~p~~~~~~~k~~ie~~l~~~--~i~~t~i~~g~f~e 147 (233)
T PF05368_consen 107 YDESSG------------------------------------S-EPEIPHFDQKAEIEEYLRES--GIPYTIIRPGFFME 147 (233)
T ss_dssp TTTTTT------------------------------------S-TTHHHHHHHHHHHHHHHHHC--TSEBEEEEE-EEHH
T ss_pred cccccc------------------------------------c-cccchhhhhhhhhhhhhhhc--cccceeccccchhh
Confidence 321100 0 11 22445788889888775 89999999998755
Q ss_pred CCCCCccccCCCCCCcHHHHHHHHhc-cceEeecCCCCccccc-cHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCC
Q psy5825 436 TWKEPIVGWSNNLYGPGGAAAGAALG-LIHTFYAKHDKKCDLI-PVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRT 513 (596)
Q Consensus 436 ~~~~p~~G~~~~~~~~~~l~~~~~~g-~~~~~~~~~~~~~d~i-pVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (596)
....+..++ ...... ....++++++....++ .++|++.++..++..+... .
T Consensus 148 ~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvg~~va~il~~p~~~----------------~ 200 (233)
T PF05368_consen 148 NLLPPFAPV-----------VDIKKSKDVVTLPGPGNQKAVPVTDTRDVGRAVAAILLDPEKH----------------N 200 (233)
T ss_dssp HHHTTTHHT-----------TCSCCTSSEEEEETTSTSEEEEEEHHHHHHHHHHHHHHSGGGT----------------T
T ss_pred hhhhhhccc-----------ccccccceEEEEccCCCccccccccHHHHHHHHHHHHcChHHh----------------c
Confidence 322111000 001111 1234566666666665 9999999999998876541 1
Q ss_pred CCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 514 DPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 514 ~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+..|++++ ..+|+.|+++.+.+.+|
T Consensus 201 ~~~~~~~~~---~~~t~~eia~~~s~~~G 226 (233)
T PF05368_consen 201 NGKTIFLAG---ETLTYNEIAAILSKVLG 226 (233)
T ss_dssp EEEEEEEGG---GEEEHHHHHHHHHHHHT
T ss_pred CCEEEEeCC---CCCCHHHHHHHHHHHHC
Confidence 356788766 47899999999999988
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.9e-08 Score=99.12 Aligned_cols=114 Identities=17% Similarity=0.156 Sum_probs=83.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+++..- +..++ ..+|+|||+|+..... ..+...+.+|+.|+..|++++...
T Consensus 67 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 140 (256)
T PRK12748 67 VRCEHMEIDLSQPYA------PNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQ 140 (256)
T ss_pred CeEEEEECCCCCHHH------HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 468999999997542 33332 3579999999875321 223557899999999999988641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
....+||++||..+++... ....|+.||++.+.++..+
T Consensus 141 ~~~~~~~~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 181 (256)
T PRK12748 141 YDGKAGGRIINLTSGQSLGPMP---------------------------------------DELAYAATKGAIEAFTKSL 181 (256)
T ss_pred hhhcCCeEEEEECCccccCCCC---------------------------------------CchHHHHHHHHHHHHHHHH
Confidence 1346899999987654210 1145999999999998776
Q ss_pred h-----cCCCEEEecCCcccc
Q psy5825 420 L-----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G 435 (596)
+ .++++++++||.+..
T Consensus 182 a~e~~~~~i~v~~i~Pg~~~t 202 (256)
T PRK12748 182 APELAEKGITVNAVNPGPTDT 202 (256)
T ss_pred HHHHHHhCeEEEEEEeCcccC
Confidence 4 589999999998754
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=4.3e-08 Score=97.72 Aligned_cols=148 Identities=14% Similarity=0.061 Sum_probs=101.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..++. .+|+|||+|+..... ..+...+.+|+.|+.++++++...
T Consensus 55 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 128 (241)
T PRK07454 55 VKAAAYSIDLSNPEA------IAPGIAELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPG 128 (241)
T ss_pred CcEEEEEccCCCHHH------HHHHHHHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 478899999997642 333333 589999999975321 234567889999999988877431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||..+++... ....|+.||+..+.+++.+
T Consensus 129 ~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~~~~~~~~~~ 169 (241)
T PRK07454 129 MRARGGGLIINVSSIAARNAFP---------------------------------------QWGAYCVSKAALAAFTKCL 169 (241)
T ss_pred HHhcCCcEEEEEccHHhCcCCC---------------------------------------CccHHHHHHHHHHHHHHHH
Confidence 3457899999988765311 2246999999999988765
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+ .|++++++|||.|-.+... .. . .. ..+ ....+++.+|+|.+++.++..+
T Consensus 170 a~e~~~~gi~v~~i~pg~i~t~~~~------~~-~---------~~---~~~-----~~~~~~~~~~va~~~~~l~~~~ 224 (241)
T PRK07454 170 AEEERSHGIRVCTITLGAVNTPLWD------TE-T---------VQ---ADF-----DRSAMLSPEQVAQTILHLAQLP 224 (241)
T ss_pred HHHhhhhCCEEEEEecCcccCCccc------cc-c---------cc---ccc-----ccccCCCHHHHHHHHHHHHcCC
Confidence 4 5899999999998654210 00 0 00 000 0123589999999999998654
|
|
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.90 E-value=3.2e-08 Score=97.83 Aligned_cols=169 Identities=13% Similarity=-0.013 Sum_probs=112.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhcCCCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRCSQLK 346 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~~~vk 346 (596)
.+++++.+|++++. ++..++. .+|+|||+|+.... ......++.+|+.|+.++++++.. .+..
T Consensus 45 ~~~~~~~~Dl~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~g 117 (230)
T PRK07041 45 APVRTAALDITDEA------AVDAFFAEAGPFDHVVITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARI-APGG 117 (230)
T ss_pred CceEEEEccCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhh-cCCe
Confidence 56889999999654 3666554 47999999997432 123456889999999999996654 4668
Q ss_pred eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---cCC
Q psy5825 347 AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---YKL 423 (596)
Q Consensus 347 rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---~gl 423 (596)
+||++||.+.+.... ..+.|+.+|++.+.+++..+ .++
T Consensus 118 ~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~i 158 (230)
T PRK07041 118 SLTFVSGFAAVRPSA---------------------------------------SGVLQGAINAALEALARGLALELAPV 158 (230)
T ss_pred EEEEECchhhcCCCC---------------------------------------cchHHHHHHHHHHHHHHHHHHHhhCc
Confidence 999999988765311 22469999999999998876 468
Q ss_pred CEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCC
Q psy5825 424 PLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPP 503 (596)
Q Consensus 424 ~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~ 503 (596)
.++++.||.|-.+..... .. .....++..+.. . ++. .-+...+|+|++++.++....
T Consensus 159 rv~~i~pg~~~t~~~~~~---~~--~~~~~~~~~~~~-~---~~~-----~~~~~~~dva~~~~~l~~~~~--------- 215 (230)
T PRK07041 159 RVNTVSPGLVDTPLWSKL---AG--DAREAMFAAAAE-R---LPA-----RRVGQPEDVANAILFLAANGF--------- 215 (230)
T ss_pred eEEEEeecccccHHHHhh---hc--cchHHHHHHHHh-c---CCC-----CCCcCHHHHHHHHHHHhcCCC---------
Confidence 899999988855321100 00 001112211111 1 111 123467999999999875321
Q ss_pred CCcCCCCCCCCCCeEEccCC
Q psy5825 504 ASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 504 ~~~~~~~~~~~~~vyni~~~ 523 (596)
..|.+|++.++
T Consensus 216 ---------~~G~~~~v~gg 226 (230)
T PRK07041 216 ---------TTGSTVLVDGG 226 (230)
T ss_pred ---------cCCcEEEeCCC
Confidence 35789999887
|
|
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=98.90 E-value=8.8e-08 Score=95.45 Aligned_cols=168 Identities=13% Similarity=0.122 Sum_probs=107.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+++.. .+..++ ..+|+|||||+.... ...+..++.+|+.|+.++++++...
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (245)
T PRK12936 52 ERVKIFPANLSDRD------EVKALGQKAEADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHP 125 (245)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHH
Confidence 46889999999654 244443 358999999997532 1345668899999999998887531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+|||+||...+.... ....|+.+|+..+.++..+
T Consensus 126 ~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sk~a~~~~~~~l 166 (245)
T PRK12936 126 MMRRRYGRIINITSVVGVTGNP---------------------------------------GQANYCASKAGMIGFSKSL 166 (245)
T ss_pred HHHhCCCEEEEECCHHhCcCCC---------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 2457899999975432110 1135999999887777654
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.+..+... ... ........+. ++ ...+...++++++++.++....
T Consensus 167 a~~~~~~~i~v~~i~pg~~~t~~~~-------~~~---~~~~~~~~~~---~~-----~~~~~~~~~ia~~~~~l~~~~~ 228 (245)
T PRK12936 167 AQEIATRNVTVNCVAPGFIESAMTG-------KLN---DKQKEAIMGA---IP-----MKRMGTGAEVASAVAYLASSEA 228 (245)
T ss_pred HHHhhHhCeEEEEEEECcCcCchhc-------ccC---hHHHHHHhcC---CC-----CCCCcCHHHHHHHHHHHcCccc
Confidence 3 6899999999988553211 000 1111111111 11 1235678999999987764322
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.++
T Consensus 229 ~~----------------~~G~~~~~~~g 241 (245)
T PRK12936 229 AY----------------VTGQTIHVNGG 241 (245)
T ss_pred cC----------------cCCCEEEECCC
Confidence 10 35889999876
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=2.1e-08 Score=100.10 Aligned_cols=170 Identities=15% Similarity=0.103 Sum_probs=109.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++.. +..++. .+|+|||+|+..... ..+..++.+|+.|+.++++++..
T Consensus 51 ~~~~~~~~D~~d~~~------i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 124 (247)
T PRK09730 51 GKAFVLQADISDENQ------VVAMFTAIDQHDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVK 124 (247)
T ss_pred CeEEEEEccCCCHHH------HHHHHHHHHHhCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 468889999997653 444443 468999999964211 23446889999999988877654
Q ss_pred c------CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 342 C------SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 342 ~------~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
. .+..+||++||...+.... + ....|+.+|...+.+
T Consensus 125 ~~~~~~~~~~g~~v~~sS~~~~~~~~------------------------------------~--~~~~Y~~sK~~~~~~ 166 (247)
T PRK09730 125 RMALKHGGSGGAIVNVSSAASRLGAP------------------------------------G--EYVDYAASKGAIDTL 166 (247)
T ss_pred HHHhcCCCCCcEEEEECchhhccCCC------------------------------------C--cccchHhHHHHHHHH
Confidence 1 1235699999986543110 0 113499999999988
Q ss_pred HHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 416 VEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 416 v~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
+..++ .+++++++|||.|+++.... .+...++..+..+ . +. .-+.+++|+|++++.++
T Consensus 167 ~~~l~~~~~~~~i~v~~i~pg~~~~~~~~~--------~~~~~~~~~~~~~-~---~~-----~~~~~~~dva~~~~~~~ 229 (247)
T PRK09730 167 TTGLSLEVAAQGIRVNCVRPGFIYTEMHAS--------GGEPGRVDRVKSN-I---PM-----QRGGQPEEVAQAIVWLL 229 (247)
T ss_pred HHHHHHHHHHhCeEEEEEEeCCCcCccccc--------CCCHHHHHHHHhc-C---CC-----CCCcCHHHHHHHHHhhc
Confidence 87654 58999999999999975321 1111222222211 1 11 11247899999999887
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|.+|++.++
T Consensus 230 ~~~~~~----------------~~g~~~~~~g~ 246 (247)
T PRK09730 230 SDKASY----------------VTGSFIDLAGG 246 (247)
T ss_pred ChhhcC----------------ccCcEEecCCC
Confidence 543221 25778887764
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.89 E-value=9.8e-08 Score=95.52 Aligned_cols=165 Identities=13% Similarity=0.094 Sum_probs=109.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh----------------hhhHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF----------------DELIQDAFTLNIQATR 333 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~----------------~~~~~~~~~~NV~GT~ 333 (596)
.++.++.+|++++.. +..++ ..+|+|||+|+.... ...+..++.+|+.|+.
T Consensus 54 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 127 (253)
T PRK08217 54 TEVRGYAANVTDEED------VEATFAQIAEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVF 127 (253)
T ss_pred CceEEEEcCCCCHHH------HHHHHHHHHHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHH
Confidence 468889999987542 33332 347999999986321 1234457789999999
Q ss_pred HHHHHHHh----cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHH
Q psy5825 334 ELLDLATR----CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTK 409 (596)
Q Consensus 334 ~LL~~a~~----~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK 409 (596)
+++..+.. ...-..||++||..+++.. ....|+.||
T Consensus 128 ~~~~~~~~~l~~~~~~~~iv~~ss~~~~~~~----------------------------------------~~~~Y~~sK 167 (253)
T PRK08217 128 LCGREAAAKMIESGSKGVIINISSIARAGNM----------------------------------------GQTNYSASK 167 (253)
T ss_pred HHHHHHHHHHHhcCCCeEEEEEccccccCCC----------------------------------------CCchhHHHH
Confidence 88776553 1123479999998766531 124599999
Q ss_pred HHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHH
Q psy5825 410 AIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATN 484 (596)
Q Consensus 410 ~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~ 484 (596)
.+.+.+++.++ .+++++.++||.|.++.... . ...+...+..+ . ....+.+++++|+
T Consensus 168 ~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~~~~-------~--~~~~~~~~~~~-~--------~~~~~~~~~~~a~ 229 (253)
T PRK08217 168 AGVAAMTVTWAKELARYGIRVAAIAPGVIETEMTAA-------M--KPEALERLEKM-I--------PVGRLGEPEEIAH 229 (253)
T ss_pred HHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCccccc-------c--CHHHHHHHHhc-C--------CcCCCcCHHHHHH
Confidence 99999988765 58999999999997764311 1 11111111111 1 1124678999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 485 MMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 485 aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
+++.++.... ..|.+|++.++
T Consensus 230 ~~~~l~~~~~------------------~~g~~~~~~gg 250 (253)
T PRK08217 230 TVRFIIENDY------------------VTGRVLEIDGG 250 (253)
T ss_pred HHHHHHcCCC------------------cCCcEEEeCCC
Confidence 9998884321 36889999887
|
|
| >KOG1372|consensus | Back alignment and domain information |
|---|
Probab=98.89 E-value=8.4e-09 Score=99.14 Aligned_cols=230 Identities=16% Similarity=0.129 Sum_probs=151.4
Q ss_pred eEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccc--cEEEEcCccC
Q psy5825 238 GIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHI--HVIIHAAASL 315 (596)
Q Consensus 238 ~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~v--d~ViH~AA~v 315 (596)
.|+.++|..+... .+|+..+...+.- .....+....||++|..+ +..+++.+ +-|+|+||..
T Consensus 54 eVHGiiRRsSsFN-T~RIeHlY~nP~~---------h~~~~mkLHYgDmTDss~------L~k~I~~ikPtEiYnLaAQS 117 (376)
T KOG1372|consen 54 EVHGIIRRSSSFN-TARIEHLYSNPHT---------HNGASMKLHYGDMTDSSC------LIKLISTIKPTEVYNLAAQS 117 (376)
T ss_pred eeeEEEeeccccc-hhhhhhhhcCchh---------cccceeEEeeccccchHH------HHHHHhccCchhhhhhhhhc
Confidence 6888888765443 3567765543321 112567889999998765 77777754 8999999985
Q ss_pred C----hhhhHHHHHHHHHHHHHHHHHHHHhcC--CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHH
Q psy5825 316 R----FDELIQDAFTLNIQATRELLDLATRCS--QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEEL 389 (596)
Q Consensus 316 ~----~~~~~~~~~~~NV~GT~~LL~~a~~~~--~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~ 389 (596)
+ |+.+. -..++...||+.||++.+.|. .--+|..+||...||....++..
T Consensus 118 HVkvSFdlpe-YTAeVdavGtLRlLdAi~~c~l~~~VrfYQAstSElyGkv~e~PQs----------------------- 173 (376)
T KOG1372|consen 118 HVKVSFDLPE-YTAEVDAVGTLRLLDAIRACRLTEKVRFYQASTSELYGKVQEIPQS----------------------- 173 (376)
T ss_pred ceEEEeeccc-ceeeccchhhhhHHHHHHhcCcccceeEEecccHhhcccccCCCcc-----------------------
Confidence 4 43321 244677889999999988753 22489999999999964322110
Q ss_pred HhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHH----HHHHHHhccc
Q psy5825 390 EILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGG----AAAGAALGLI 463 (596)
Q Consensus 390 ~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~----l~~~~~~g~~ 463 (596)
..+|- . +.++|+.+|..|-.++-.|. +++-.+ -|+++.+ ..|..|. +..++ -+..+..|..
T Consensus 174 -E~TPF-y---PRSPYa~aKmy~~WivvNyREAYnmfAc---NGILFNH-ESPRRGe----nFVTRKItRsvakI~~gqq 240 (376)
T KOG1372|consen 174 -ETTPF-Y---PRSPYAAAKMYGYWIVVNYREAYNMFAC---NGILFNH-ESPRRGE----NFVTRKITRSVAKISLGQQ 240 (376)
T ss_pred -cCCCC-C---CCChhHHhhhhheEEEEEhHHhhcceee---ccEeecC-CCCcccc----chhhHHHHHHHHHhhhcce
Confidence 01111 0 23679999999987776665 444322 3444443 3343332 22333 3333444544
Q ss_pred -eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 464 -HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 464 -~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
....|+.+..+||-|..|.+.||..++... ...-|-|+.+ ...++++|++.....++
T Consensus 241 e~~~LGNL~a~RDWGhA~dYVEAMW~mLQ~d--------------------~PdDfViATg--e~hsVrEF~~~aF~~ig 298 (376)
T KOG1372|consen 241 EKIELGNLSALRDWGHAGDYVEAMWLMLQQD--------------------SPDDFVIATG--EQHSVREFCNLAFAEIG 298 (376)
T ss_pred eeEEecchhhhcccchhHHHHHHHHHHHhcC--------------------CCCceEEecC--CcccHHHHHHHHHHhhC
Confidence 334688999999999999999998888653 3456888888 78899999998877666
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.4e-07 Score=94.96 Aligned_cols=169 Identities=13% Similarity=0.086 Sum_probs=110.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh---h---hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF---D---ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~---~---~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++. .+..++ ..+|+||||||.... . ..+...+.+|+.|+.++++++...
T Consensus 60 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 133 (255)
T PRK06113 60 GQAFACRCDITSEQ------ELSALADFALSKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 46788999999754 233332 357999999997532 2 234456899999999999998631
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..+||++||.+...... ....|+.||++.+.+++.++
T Consensus 134 ~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la 174 (255)
T PRK06113 134 EKNGGGVILTITSMAAENKNI---------------------------------------NMTSYASSKAAASHLVRNMA 174 (255)
T ss_pred HhcCCcEEEEEecccccCCCC---------------------------------------CcchhHHHHHHHHHHHHHHH
Confidence 2345899999976532100 12469999999999998765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+.++++.||.|..+... + .. ...+...+.. .++ ...+...+|++++++.++.....
T Consensus 175 ~~~~~~~i~v~~v~pg~~~t~~~~---~----~~-~~~~~~~~~~----~~~-----~~~~~~~~d~a~~~~~l~~~~~~ 237 (255)
T PRK06113 175 FDLGEKNIRVNGIAPGAILTDALK---S----VI-TPEIEQKMLQ----HTP-----IRRLGQPQDIANAALFLCSPAAS 237 (255)
T ss_pred HHhhhhCeEEEEEecccccccccc---c----cc-CHHHHHHHHh----cCC-----CCCCcCHHHHHHHHHHHcCcccc
Confidence 5789999999988554211 0 01 1111111111 111 12356889999999988753221
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|+++++.++
T Consensus 238 ~----------------~~G~~i~~~gg 249 (255)
T PRK06113 238 W----------------VSGQILTVSGG 249 (255)
T ss_pred C----------------ccCCEEEECCC
Confidence 1 35889998887
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.1e-07 Score=95.83 Aligned_cols=170 Identities=12% Similarity=0.203 Sum_probs=111.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+++.. .+..+++ .+|+|||+|+.... ...+...+.+|+.|+.++++++...
T Consensus 63 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 136 (258)
T PRK06935 63 RKVTFVQVDLTKPE------SAEKVVKEALEEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKV 136 (258)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHH
Confidence 46889999999754 2444443 57999999997532 1234567899999988888777531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||..++.... ....|+.+|++.+.+++.+
T Consensus 137 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 177 (258)
T PRK06935 137 MAKQGSGKIINIASMLSFQGGK---------------------------------------FVPAYTASKHGVAGLTKAF 177 (258)
T ss_pred HHhcCCeEEEEECCHHhccCCC---------------------------------------CchhhHHHHHHHHHHHHHH
Confidence 3456899999987653211 1246999999999999887
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+++++||.|..+.....+. .. .....+.. .++ ..-+...+|++.+++.++....
T Consensus 178 a~e~~~~gi~v~~i~PG~v~t~~~~~~~~------~~-~~~~~~~~----~~~-----~~~~~~~~dva~~~~~l~s~~~ 241 (258)
T PRK06935 178 ANELAAYNIQVNAIAPGYIKTANTAPIRA------DK-NRNDEILK----RIP-----AGRWGEPDDLMGAAVFLASRAS 241 (258)
T ss_pred HHHhhhhCeEEEEEEeccccccchhhccc------Ch-HHHHHHHh----cCC-----CCCCCCHHHHHHHHHHHcChhh
Confidence 6 58999999999986653211100 00 11111111 111 1236677899999888775432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|.++.+.++
T Consensus 242 ~~----------------~~G~~i~~dgg 254 (258)
T PRK06935 242 DY----------------VNGHILAVDGG 254 (258)
T ss_pred cC----------------CCCCEEEECCC
Confidence 21 35778887766
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.86 E-value=1.3e-07 Score=95.31 Aligned_cols=174 Identities=13% Similarity=0.142 Sum_probs=112.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..++ ..+|+|||||+.... ...+...+.+|+.|+.++++++...
T Consensus 56 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 129 (260)
T PRK06198 56 AKAVFVQADLSDVED------CRRVVAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKL 129 (260)
T ss_pred CeEEEEEccCCCHHH------HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 468889999997542 44443 358999999997431 1223457899999999999888642
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||..+++... ..+.|+.+|...|.+++.
T Consensus 130 ~~~~~~~g~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 170 (260)
T PRK06198 130 MRRRKAEGTIVNIGSMSAHGGQP---------------------------------------FLAAYCASKGALATLTRN 170 (260)
T ss_pred HHhcCCCCEEEEECCcccccCCC---------------------------------------CcchhHHHHHHHHHHHHH
Confidence 1135799999988765311 124699999999999886
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCC-CCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNL-YGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .++.++.++||.++++..... ...+ .....++.. ... ......++++++++++++.++..
T Consensus 171 ~a~e~~~~~i~v~~i~pg~~~t~~~~~~---~~~~~~~~~~~~~~-~~~--------~~~~~~~~~~~~~a~~~~~l~~~ 238 (260)
T PRK06198 171 AAYALLRNRIRVNGLNIGWMATEGEDRI---QREFHGAPDDWLEK-AAA--------TQPFGRLLDPDEVARAVAFLLSD 238 (260)
T ss_pred HHHHhcccCeEEEEEeeccccCcchhhh---hhhccCCChHHHHH-Hhc--------cCCccCCcCHHHHHHHHHHHcCh
Confidence 55 568999999999987642100 0000 011112111 110 11123468999999999988754
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|++|++.++
T Consensus 239 ~~~~----------------~~G~~~~~~~~ 253 (260)
T PRK06198 239 ESGL----------------MTGSVIDFDQS 253 (260)
T ss_pred hhCC----------------ccCceEeECCc
Confidence 3211 35788888776
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.85 E-value=5.6e-08 Score=98.04 Aligned_cols=142 Identities=10% Similarity=0.060 Sum_probs=97.7
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
++.++.+|++++.. +..+++ .+|+|||+||..... ..+...+.+|+.|+.++++++..
T Consensus 51 ~~~~~~~Dl~~~~~------i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~ 124 (257)
T PRK07024 51 RVSVYAADVRDADA------LAAAAADFIAAHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAP 124 (257)
T ss_pred eeEEEEcCCCCHHH------HHHHHHHHHHhCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHH
Confidence 68899999997643 444433 379999999974311 23456889999999998875432
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||.+.+.... ....|+.||++.+.++..+
T Consensus 125 ~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 165 (257)
T PRK07024 125 MRAARRGTLVGIASVAGVRGLP---------------------------------------GAGAYSASKAAAIKYLESL 165 (257)
T ss_pred HHhcCCCEEEEEechhhcCCCC---------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 13457899999976542110 1245999999999998775
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
. .|++++++|||.|.++.... . . +. ...+++.+++|..++.++..
T Consensus 166 ~~e~~~~gi~v~~v~Pg~v~t~~~~~--------~-----------~----~~-----~~~~~~~~~~a~~~~~~l~~ 215 (257)
T PRK07024 166 RVELRPAGVRVVTIAPGYIRTPMTAH--------N-----------P----YP-----MPFLMDADRFAARAARAIAR 215 (257)
T ss_pred HHHhhccCcEEEEEecCCCcCchhhc--------C-----------C----CC-----CCCccCHHHHHHHHHHHHhC
Confidence 4 68999999999997652100 0 0 00 01246899999999988753
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.85 E-value=4.9e-08 Score=98.66 Aligned_cols=115 Identities=10% Similarity=0.128 Sum_probs=84.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|+|||+||...+ ...+...+.+|+.|+..|++++...
T Consensus 44 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 117 (258)
T PRK06398 44 NDVDYFKVDVSNKE------QVIKGIDYVISKYGRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPY 117 (258)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36889999999764 244443 358999999997432 1234567899999999999888641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.||++.+.+++.+
T Consensus 118 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sKaal~~~~~~l 158 (258)
T PRK06398 118 MLKQDKGVIINIASVQSFAVTR---------------------------------------NAAAYVTSKHAVLGLTRSI 158 (258)
T ss_pred HHHcCCeEEEEeCcchhccCCC---------------------------------------CCchhhhhHHHHHHHHHHH
Confidence 3457999999987654210 1246999999999999887
Q ss_pred h----cCCCEEEecCCccccC
Q psy5825 420 L----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 420 ~----~gl~~~IlRp~~V~G~ 436 (596)
+ +++.+++++||.|-.+
T Consensus 159 a~e~~~~i~vn~i~PG~v~T~ 179 (258)
T PRK06398 159 AVDYAPTIRCVAVCPGSIRTP 179 (258)
T ss_pred HHHhCCCCEEEEEecCCccch
Confidence 6 4489999999988654
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.4e-07 Score=94.57 Aligned_cols=154 Identities=14% Similarity=0.064 Sum_probs=99.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC--------hhhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR--------FDELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~--------~~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|+++.. .+..++ .++|+|||+||... ....+..++++|+.|+.+++..+..
T Consensus 46 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 119 (248)
T PRK10538 46 DNLYIAQLDVRNRA------AIEEMLASLPAEWRNIDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119 (248)
T ss_pred cceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46889999999754 244333 36899999998632 1123456889999997777766642
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||.+.+.... ..+.|+.+|...+.++..
T Consensus 120 ~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~~~~~~~~~ 160 (248)
T PRK10538 120 GMVERNHGHIINIGSTAGSWPYA---------------------------------------GGNVYGATKAFVRQFSLN 160 (248)
T ss_pred HHHhcCCcEEEEECCcccCCCCC---------------------------------------CCchhHHHHHHHHHHHHH
Confidence 13567899999976532100 124699999999999877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.+ .++.+.+++||.|.|+..... .+.+....... .+. ...++..+|+|++++.++..
T Consensus 161 l~~~~~~~~i~v~~v~pg~i~~~~~~~~-----~~~~~~~~~~~--------~~~----~~~~~~~~dvA~~~~~l~~~ 222 (248)
T PRK10538 161 LRTDLHGTAVRVTDIEPGLVGGTEFSNV-----RFKGDDGKAEK--------TYQ----NTVALTPEDVSEAVWWVATL 222 (248)
T ss_pred HHHHhcCCCcEEEEEeCCeecccccchh-----hccCcHHHHHh--------hcc----ccCCCCHHHHHHHHHHHhcC
Confidence 65 579999999999976532100 01111100000 000 11346899999999988743
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.9e-07 Score=94.02 Aligned_cols=116 Identities=14% Similarity=0.113 Sum_probs=82.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..++ ..+|+|||||+.... ...+...+.+|+.|+..+++++...
T Consensus 51 ~~~~~~~~Dl~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 124 (256)
T PRK08643 51 GKAIAVKADVSDRDQ------VFAAVRQVVDTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEA 124 (256)
T ss_pred CeEEEEECCCCCHHH------HHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 468889999997652 44433 358999999986432 1234567899999999888877641
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||...+.... ....|+.+|+..+.++..
T Consensus 125 ~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 165 (256)
T PRK08643 125 FKKLGHGGKIINATSQAGVVGNP---------------------------------------ELAVYSSTKFAVRGLTQT 165 (256)
T ss_pred HHhcCCCCEEEEECccccccCCC---------------------------------------CCchhHHHHHHHHHHHHH
Confidence 1235899999876432100 124599999999888877
Q ss_pred Hh-----cCCCEEEecCCccccCC
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~ 437 (596)
++ .|+.+++++||+|.++.
T Consensus 166 la~e~~~~gi~v~~i~Pg~v~t~~ 189 (256)
T PRK08643 166 AARDLASEGITVNAYAPGIVKTPM 189 (256)
T ss_pred HHHHhcccCcEEEEEeeCCCcChh
Confidence 65 68999999999997753
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.3e-07 Score=95.23 Aligned_cols=173 Identities=12% Similarity=0.075 Sum_probs=108.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. .+..++ ..+|+|||+||.... ...+...+.+|+.|+..+++++..
T Consensus 61 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 134 (257)
T PRK12744 61 AKAVAFQADLTTAA------AVEKLFDDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH 134 (257)
T ss_pred CcEEEEecCcCCHH------HHHHHHHHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 46889999999754 344443 358999999997421 123456889999999999999875
Q ss_pred cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 342 CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 342 ~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
+....++|+++|..+..... ....|+.||++.|.+++.++
T Consensus 135 ~~~~~~iv~~~ss~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~ 175 (257)
T PRK12744 135 LNDNGKIVTLVTSLLGAFTP---------------------------------------FYSAYAGSKAPVEHFTRAASK 175 (257)
T ss_pred hccCCCEEEEecchhcccCC---------------------------------------CcccchhhHHHHHHHHHHHHH
Confidence 22234677764433221100 22469999999999998876
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+++++++||.|.++...+. ..+..+ ..... . ..........+.+++|+|.+++.++.....
T Consensus 176 e~~~~~i~v~~v~pg~v~t~~~~~~-------~~~~~~--~~~~~-~--~~~~~~~~~~~~~~~dva~~~~~l~~~~~~- 242 (257)
T PRK12744 176 EFGARGISVTAVGPGPMDTPFFYPQ-------EGAEAV--AYHKT-A--AALSPFSKTGLTDIEDIVPFIRFLVTDGWW- 242 (257)
T ss_pred HhCcCceEEEEEecCccccchhccc-------cccchh--hcccc-c--ccccccccCCCCCHHHHHHHHHHhhcccce-
Confidence 479999999999976533211 011100 00000 0 001111122478899999999998863211
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|.+|++.++
T Consensus 243 ----------------~~g~~~~~~gg 253 (257)
T PRK12744 243 ----------------ITGQTILINGG 253 (257)
T ss_pred ----------------eecceEeecCC
Confidence 24789998876
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.6e-07 Score=93.93 Aligned_cols=155 Identities=13% Similarity=0.127 Sum_probs=104.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.- +..++ ..+|+|||+|+.... ...+...+.+|+.|+.++++++...
T Consensus 52 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 125 (248)
T TIGR01832 52 RRFLSLTADLSDIEA------IKALVDSAVEEFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKH 125 (248)
T ss_pred CceEEEECCCCCHHH------HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 468899999997542 43333 358999999997532 1235567899999999999988641
Q ss_pred ---CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+ ..+||++||..+++... ....|+.||++.+.+++.
T Consensus 126 ~~~~~~~g~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~ 166 (248)
T TIGR01832 126 FLKQGRGGKIINIASMLSFQGGI---------------------------------------RVPSYTASKHGVAGLTKL 166 (248)
T ss_pred HHhcCCCeEEEEEecHHhccCCC---------------------------------------CCchhHHHHHHHHHHHHH
Confidence 22 46899999987765311 123599999999999988
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .|+.+++++||.|..+.... ..........+ . ..++ ...|+..+|+|++++.++..
T Consensus 167 la~e~~~~gi~v~~v~pg~v~t~~~~~-------~~~~~~~~~~~-~---~~~~-----~~~~~~~~dva~~~~~l~s~ 229 (248)
T TIGR01832 167 LANEWAAKGINVNAIAPGYMATNNTQA-------LRADEDRNAAI-L---ERIP-----AGRWGTPDDIGGPAVFLASS 229 (248)
T ss_pred HHHHhCccCcEEEEEEECcCcCcchhc-------cccChHHHHHH-H---hcCC-----CCCCcCHHHHHHHHHHHcCc
Confidence 76 58999999999997653211 01101111111 1 1112 13578899999999988754
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.84 E-value=1.6e-07 Score=93.22 Aligned_cols=171 Identities=13% Similarity=0.067 Sum_probs=110.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCC----h----hhhHHHHHHHHHHHHHHHHHHHHhc---CCC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLR----F----DELIQDAFTLNIQATRELLDLATRC---SQL 345 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~----~----~~~~~~~~~~NV~GT~~LL~~a~~~---~~v 345 (596)
.++.++.+|++++ ...+...+..+|+|||+|+... + ...+..++.+|+.|+.++++++... .+.
T Consensus 45 ~~~~~~~~D~~~~-----~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~ 119 (235)
T PRK06550 45 GNFHFLQLDLSDD-----LEPLFDWVPSVDILCNTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLERKS 119 (235)
T ss_pred CcEEEEECChHHH-----HHHHHHhhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCC
Confidence 4688899999876 1223334467899999999642 1 1234568899999999999988641 234
Q ss_pred ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----
Q psy5825 346 KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----- 420 (596)
Q Consensus 346 krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----- 420 (596)
.+||++||++.+.... ....|+.+|...+.++..++
T Consensus 120 ~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~~~~~ 160 (235)
T PRK06550 120 GIIINMCSIASFVAGG---------------------------------------GGAAYTASKHALAGFTKQLALDYAK 160 (235)
T ss_pred cEEEEEcChhhccCCC---------------------------------------CCcccHHHHHHHHHHHHHHHHHhhh
Confidence 5899999987543210 12459999999888877655
Q ss_pred cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCC
Q psy5825 421 YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHV 500 (596)
Q Consensus 421 ~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~ 500 (596)
.|+++++++||.|.++.... .+ . ...+...+.. . .+ ...+...+++|++++.++......
T Consensus 161 ~gi~v~~v~pg~v~t~~~~~--~~----~-~~~~~~~~~~-~---~~-----~~~~~~~~~~a~~~~~l~s~~~~~---- 220 (235)
T PRK06550 161 DGIQVFGIAPGAVKTPMTAA--DF----E-PGGLADWVAR-E---TP-----IKRWAEPEEVAELTLFLASGKADY---- 220 (235)
T ss_pred cCeEEEEEeeCCccCccccc--cc----C-chHHHHHHhc-c---CC-----cCCCCCHHHHHHHHHHHcChhhcc----
Confidence 58999999999997764211 01 0 1111111111 1 11 233677899999999988543221
Q ss_pred CCCCCcCCCCCCCCCCeEEccCC
Q psy5825 501 APPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 501 ~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|.++.+.++
T Consensus 221 ------------~~g~~~~~~gg 231 (235)
T PRK06550 221 ------------MQGTIVPIDGG 231 (235)
T ss_pred ------------CCCcEEEECCc
Confidence 25677777665
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=1.8e-07 Score=95.51 Aligned_cols=116 Identities=13% Similarity=0.135 Sum_probs=84.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh----------------------hhhHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF----------------------DELIQDAFTL 327 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~----------------------~~~~~~~~~~ 327 (596)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+
T Consensus 59 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (278)
T PRK08277 59 GEALAVKADVLDKE------SLEQARQQILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDL 132 (278)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhh
Confidence 46889999999754 233333 368999999995421 1234567899
Q ss_pred HHHHHHHHHHHHHhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCch
Q psy5825 328 NIQATRELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNS 404 (596)
Q Consensus 328 NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~ 404 (596)
|+.|+..++.++... .+..+||++||...+.... ....
T Consensus 133 n~~~~~~~~~~~~~~~~~~~~g~ii~isS~~~~~~~~---------------------------------------~~~~ 173 (278)
T PRK08277 133 NLLGTLLPTQVFAKDMVGRKGGNIINISSMNAFTPLT---------------------------------------KVPA 173 (278)
T ss_pred hhHHHHHHHHHHHHHHHhcCCcEEEEEccchhcCCCC---------------------------------------CCch
Confidence 999998777665431 2356899999987764211 1246
Q ss_pred HHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCC
Q psy5825 405 YSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 405 Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~ 437 (596)
|+.||++.+.+++.++ .|+.+.+++||.|..+.
T Consensus 174 Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 174 YSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred hHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 9999999999988766 58999999999998764
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=4e-08 Score=100.42 Aligned_cols=114 Identities=13% Similarity=0.211 Sum_probs=81.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--------ccccEEEEcCccCChh-------hhHHHHHHHHHHH----HHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQA----TRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~G----T~~LL~ 337 (596)
..+.++.+|++++. .+..++ ..+|+|||+||..... ..+...+++|+.| +.+++.
T Consensus 47 ~~~~~~~~Dl~d~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~ 120 (277)
T PRK05993 47 EGLEAFQLDYAEPE------SIAALVAQVLELSGGRLDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIP 120 (277)
T ss_pred CCceEEEccCCCHH------HHHHHHHHHHHHcCCCccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHH
Confidence 35788999999754 233333 2579999999875321 2345588999999 555666
Q ss_pred HHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 338 LATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 338 ~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
++.. .+..+||++||.+.+.... ....|+.||++.+.++.
T Consensus 121 ~~~~-~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~ 160 (277)
T PRK05993 121 VMRK-QGQGRIVQCSSILGLVPMK---------------------------------------YRGAYNASKFAIEGLSL 160 (277)
T ss_pred HHhh-cCCCEEEEECChhhcCCCC---------------------------------------ccchHHHHHHHHHHHHH
Confidence 6665 4567999999975432100 22469999999999987
Q ss_pred HHh-----cCCCEEEecCCccccC
Q psy5825 418 KYL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~ 436 (596)
.+. .|+.+++++||.|-.+
T Consensus 161 ~l~~el~~~gi~v~~v~Pg~v~T~ 184 (277)
T PRK05993 161 TLRMELQGSGIHVSLIEPGPIETR 184 (277)
T ss_pred HHHHHhhhhCCEEEEEecCCccCc
Confidence 654 7899999999988543
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.83 E-value=2.4e-07 Score=93.21 Aligned_cols=114 Identities=17% Similarity=0.231 Sum_probs=82.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh---cCCC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR---CSQL 345 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~---~~~v 345 (596)
.++.++.+|++++. .+..++. ++|+|||||+.... ...+...+.+|+.|+.++++.+.. ..+.
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~ 124 (257)
T PRK09291 51 LALRVEKLDLTDAI------DRAQAAEWDVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMVARGK 124 (257)
T ss_pred CcceEEEeeCCCHH------HHHHHhcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCC
Confidence 46889999999764 3666655 89999999996532 123455788999998877665432 1355
Q ss_pred ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----
Q psy5825 346 KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----- 420 (596)
Q Consensus 346 krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----- 420 (596)
.+||++||...+.... ....|+.||++.|.+++.+.
T Consensus 125 ~~iv~~SS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l~~~~~~ 165 (257)
T PRK09291 125 GKVVFTSSMAGLITGP---------------------------------------FTGAYCASKHALEAIAEAMHAELKP 165 (257)
T ss_pred ceEEEEcChhhccCCC---------------------------------------CcchhHHHHHHHHHHHHHHHHHHHh
Confidence 7999999975432100 22469999999999887654
Q ss_pred cCCCEEEecCCcccc
Q psy5825 421 YKLPLAMVRPSIVVS 435 (596)
Q Consensus 421 ~gl~~~IlRp~~V~G 435 (596)
.|++++++|||.+..
T Consensus 166 ~gi~~~~v~pg~~~t 180 (257)
T PRK09291 166 FGIQVATVNPGPYLT 180 (257)
T ss_pred cCcEEEEEecCcccc
Confidence 689999999998743
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.82 E-value=1e-07 Score=95.34 Aligned_cols=156 Identities=16% Similarity=0.197 Sum_probs=99.3
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHH----HHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQ----ATRELLDLA 339 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~----GT~~LL~~a 339 (596)
.+.++.+|++++. .+..++ ..+|+|||+|+..... ..+..++.+|+. ++++++.++
T Consensus 52 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 125 (251)
T PRK07069 52 VAFAAVQDVTDEA------QWQALLAQAADAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYL 125 (251)
T ss_pred eEEEEEeecCCHH------HHHHHHHHHHHHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 3556889999654 344443 3579999999976432 133457788888 777788877
Q ss_pred HhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 340 TRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 340 ~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.. .+..+||++||...+.... ....|+.+|+..+.+++.+
T Consensus 126 ~~-~~~~~ii~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 165 (251)
T PRK07069 126 RA-SQPASIVNISSVAAFKAEP---------------------------------------DYTAYNASKAAVASLTKSI 165 (251)
T ss_pred hh-cCCcEEEEecChhhccCCC---------------------------------------CCchhHHHHHHHHHHHHHH
Confidence 76 4568999999987765311 1135999999999988765
Q ss_pred h-------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .++.+++++||.|.++...+.. .. ......+..+..+ ++ ...+..++|+|++++.++..
T Consensus 166 a~e~~~~~~~i~v~~v~pg~v~t~~~~~~~---~~-~~~~~~~~~~~~~----~~-----~~~~~~~~~va~~~~~l~~~ 232 (251)
T PRK07069 166 ALDCARRGLDVRCNSIHPTFIRTGIVDPIF---QR-LGEEEATRKLARG----VP-----LGRLGEPDDVAHAVLYLASD 232 (251)
T ss_pred HHHhcccCCcEEEEEEeecccCCcchhHHh---hh-ccchhHHHHHhcc----CC-----CCCCcCHHHHHHHHHHHcCc
Confidence 4 2478899999999776432110 00 0011111111111 11 12356789999999887644
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.82 E-value=8.3e-08 Score=95.67 Aligned_cols=168 Identities=13% Similarity=0.105 Sum_probs=110.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.- +..++. .+|+|||+||..... ..+...+.+|+.|+.+|++++...
T Consensus 55 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 128 (247)
T PRK05565 55 GDAIAVKADVSSEED------VENLVEQIVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPY 128 (247)
T ss_pred CeEEEEECCCCCHHH------HHHHHHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 468899999997652 444433 689999999976321 234568899999999998887641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.+|++.+.++..+
T Consensus 129 ~~~~~~~~~v~~sS~~~~~~~~---------------------------------------~~~~y~~sK~a~~~~~~~~ 169 (247)
T PRK05565 129 MIKRKSGVIVNISSIWGLIGAS---------------------------------------CEVLYSASKGAVNAFTKAL 169 (247)
T ss_pred HHhcCCcEEEEECCHhhccCCC---------------------------------------CccHHHHHHHHHHHHHHHH
Confidence 2456799999976543210 1135999998888777665
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
. .|+.++++|||.|..+.... .. ......+.. .. ....++..++++.+++.++....
T Consensus 170 ~~~~~~~gi~~~~v~pg~v~t~~~~~-------~~--~~~~~~~~~----~~-----~~~~~~~~~~va~~~~~l~~~~~ 231 (247)
T PRK05565 170 AKELAPSGIRVNAVAPGAIDTEMWSS-------FS--EEDKEGLAE----EI-----PLGRLGKPEEIAKVVLFLASDDA 231 (247)
T ss_pred HHHHHHcCeEEEEEEECCccCccccc-------cC--hHHHHHHHh----cC-----CCCCCCCHHHHHHHHHHHcCCcc
Confidence 4 68999999999986543211 11 111111111 11 12246788999999988886533
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.++
T Consensus 232 ~~----------------~~g~~~~~~~~ 244 (247)
T PRK05565 232 SY----------------ITGQIITVDGG 244 (247)
T ss_pred CC----------------ccCcEEEecCC
Confidence 21 35888888776
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.9e-07 Score=92.63 Aligned_cols=173 Identities=13% Similarity=0.028 Sum_probs=108.1
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-c
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR-C 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~-~ 342 (596)
++.++.+|++++. .+..++. .+|+|||||+.... ...+...+++|+.|+..++..+.. +
T Consensus 52 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~ 125 (255)
T PRK06463 52 GVFTIKCDVGNRD------QVKKSKEVVEKEFGRVDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLL 125 (255)
T ss_pred CCeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 5788999999754 2444433 57999999987531 123446789999997666555432 1
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..+||++||...++... . ....|+.||++.+.+++.++
T Consensus 126 ~~~~~g~iv~isS~~~~~~~~-------------------------------------~-~~~~Y~asKaa~~~~~~~la 167 (255)
T PRK06463 126 KLSKNGAIVNIASNAGIGTAA-------------------------------------E-GTTFYAITKAGIIILTRRLA 167 (255)
T ss_pred HhcCCcEEEEEcCHHhCCCCC-------------------------------------C-CccHhHHHHHHHHHHHHHHH
Confidence 3456999999987764210 0 12459999999999988876
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+++++++||.|-.+..... .. ......+....... .....+...++++.+++.++.....
T Consensus 168 ~e~~~~~i~v~~i~Pg~v~t~~~~~~---~~--~~~~~~~~~~~~~~--------~~~~~~~~~~~va~~~~~l~s~~~~ 234 (255)
T PRK06463 168 FELGKYGIRVNAVAPGWVETDMTLSG---KS--QEEAEKLRELFRNK--------TVLKTTGKPEDIANIVLFLASDDAR 234 (255)
T ss_pred HHhhhcCeEEEEEeeCCCCCchhhcc---cC--ccchHHHHHHHHhC--------CCcCCCcCHHHHHHHHHHHcChhhc
Confidence 589999999998854322100 00 00001111111110 1122356789999999988754322
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|.++.+.++
T Consensus 235 ~----------------~~G~~~~~dgg 246 (255)
T PRK06463 235 Y----------------ITGQVIVADGG 246 (255)
T ss_pred C----------------CCCCEEEECCC
Confidence 1 35788888777
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.81 E-value=2.8e-07 Score=92.67 Aligned_cols=155 Identities=12% Similarity=0.065 Sum_probs=103.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..++ ..+|+|||+|+.... ...+...+.+|+.|+..+++.+...
T Consensus 58 ~~~~~~~~Dl~~~~~------~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (254)
T PRK08085 58 IKAHAAPFNVTHKQE------VEAAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARY 131 (254)
T ss_pred CeEEEEecCCCCHHH------HHHHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 467888999997642 44443 347999999997432 2334568899999999998887642
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||........ ....|+.+|++.+.+++.+
T Consensus 132 ~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 172 (254)
T PRK08085 132 MVKRQAGKIINICSMQSELGRD---------------------------------------TITPYAASKGAVKMLTRGM 172 (254)
T ss_pred HHHcCCcEEEEEccchhccCCC---------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 3457899999975432100 1246999999999999887
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|+.+++++||.+..+...+.. .... +....... .| ..-+...+|++++++.++..
T Consensus 173 a~e~~~~gi~v~~v~pG~~~t~~~~~~~-------~~~~-~~~~~~~~---~p-----~~~~~~~~~va~~~~~l~~~ 234 (254)
T PRK08085 173 CVELARHNIQVNGIAPGYFKTEMTKALV-------EDEA-FTAWLCKR---TP-----AARWGDPQELIGAAVFLSSK 234 (254)
T ss_pred HHHHHhhCeEEEEEEeCCCCCcchhhhc-------cCHH-HHHHHHhc---CC-----CCCCcCHHHHHHHHHHHhCc
Confidence 5 5899999999999876432110 0111 11111111 11 12366789999988888754
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.79 E-value=2.3e-07 Score=93.65 Aligned_cols=115 Identities=10% Similarity=0.120 Sum_probs=84.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++. .+|+|||+|+...+ ...+...+.+|+.|+.++++++...
T Consensus 58 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (260)
T PRK07063 58 ARVLAVPADVTDAA------SVAAAVAAAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPG 131 (260)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46889999999754 2444443 68999999996432 1234567899999999999987631
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.||++.+.++..+
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~l 172 (260)
T PRK07063 132 MVERGRGSIVNIASTHAFKIIP---------------------------------------GCFPYPVAKHGLLGLTRAL 172 (260)
T ss_pred HHhhCCeEEEEECChhhccCCC---------------------------------------CchHHHHHHHHHHHHHHHH
Confidence 2446899999986543210 1135999999999998876
Q ss_pred h-----cCCCEEEecCCccccC
Q psy5825 420 L-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~ 436 (596)
+ .|+.++.++||.|-.+
T Consensus 173 a~el~~~gIrvn~v~PG~v~t~ 194 (260)
T PRK07063 173 GIEYAARNVRVNAIAPGYIETQ 194 (260)
T ss_pred HHHhCccCeEEEEEeeCCccCh
Confidence 5 5899999999998554
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=98.79 E-value=4.7e-07 Score=90.01 Aligned_cols=168 Identities=11% Similarity=0.039 Sum_probs=106.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+..+++.+..
T Consensus 50 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 123 (242)
T TIGR01829 50 FDFRVVEGDVSSFE------SCKAAVAKVEAELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDG 123 (242)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57889999999754 243333 358999999986531 123455788999998886655532
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||.+...... ....|+.+|...+.+++.+
T Consensus 124 ~~~~~~~~iv~iss~~~~~~~~---------------------------------------~~~~y~~sk~a~~~~~~~l 164 (242)
T TIGR01829 124 MRERGWGRIINISSVNGQKGQF---------------------------------------GQTNYSAAKAGMIGFTKAL 164 (242)
T ss_pred HHhcCCcEEEEEcchhhcCCCC---------------------------------------CcchhHHHHHHHHHHHHHH
Confidence 13567999999975432100 1245999999888777665
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+++++||.+.++...+. +..++..+.. .. + ...+...+++++++..++....
T Consensus 165 a~~~~~~~i~v~~i~pg~~~t~~~~~~---------~~~~~~~~~~-~~---~-----~~~~~~~~~~a~~~~~l~~~~~ 226 (242)
T TIGR01829 165 AQEGATKGVTVNTISPGYIATDMVMAM---------REDVLNSIVA-QI---P-----VGRLGRPEEIAAAVAFLASEEA 226 (242)
T ss_pred HHHhhhhCeEEEEEeeCCCcCcccccc---------chHHHHHHHh-cC---C-----CCCCcCHHHHHHHHHHHcCchh
Confidence 4 689999999999977532111 1122222111 11 1 1234566889998877664322
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|.+.++
T Consensus 227 ~~----------------~~G~~~~~~gg 239 (242)
T TIGR01829 227 GY----------------ITGATLSINGG 239 (242)
T ss_pred cC----------------ccCCEEEecCC
Confidence 11 35788888876
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=1.3e-07 Score=95.32 Aligned_cols=168 Identities=12% Similarity=0.078 Sum_probs=109.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.- +..++ ..+|+|||+|+..... ..+..++.+|+.|+.+|++++...
T Consensus 52 ~~~~~~~~Dl~~~~~------~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 125 (256)
T PRK12743 52 VRAEIRQLDLSDLPE------GAQALDKLIQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARH 125 (256)
T ss_pred CceEEEEccCCCHHH------HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 568899999997542 33333 3589999999975421 234568899999999999988652
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||........ ....|+.+|.+.+.+++.
T Consensus 126 l~~~~~~g~ii~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~l~~~ 166 (256)
T PRK12743 126 MVKQGQGGRIINITSVHEHTPLP---------------------------------------GASAYTAAKHALGGLTKA 166 (256)
T ss_pred HHhcCCCeEEEEEeeccccCCCC---------------------------------------CcchhHHHHHHHHHHHHH
Confidence 1235899999975322100 124699999999999877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|++++.++||.|.++.. +. . .......... .++. ..+...+|++.+++.++...
T Consensus 167 la~~~~~~~i~v~~v~Pg~~~t~~~----~~----~-~~~~~~~~~~----~~~~-----~~~~~~~dva~~~~~l~~~~ 228 (256)
T PRK12743 167 MALELVEHGILVNAVAPGAIATPMN----GM----D-DSDVKPDSRP----GIPL-----GRPGDTHEIASLVAWLCSEG 228 (256)
T ss_pred HHHHhhhhCeEEEEEEeCCccCccc----cc----c-ChHHHHHHHh----cCCC-----CCCCCHHHHHHHHHHHhCcc
Confidence 65 579999999999987632 10 0 0111111111 1111 12457899999998887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|.++++.++
T Consensus 229 ~~~----------------~~G~~~~~dgg 242 (256)
T PRK12743 229 ASY----------------TTGQSLIVDGG 242 (256)
T ss_pred ccC----------------cCCcEEEECCC
Confidence 211 35777887766
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.78 E-value=2.5e-07 Score=93.00 Aligned_cols=170 Identities=14% Similarity=0.094 Sum_probs=109.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++. .+|+|||+|+.... ...+...+.+|+.|+.++++++...
T Consensus 47 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 120 (252)
T PRK07856 47 RPAEFHAADVRDPD------QVAALVDAIVERHGRLDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAV 120 (252)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999998654 3555544 46999999986432 1234568899999999999988641
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+..+||++||...+.... ....|+.||+..+.+++.
T Consensus 121 ~~~~~~~g~ii~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~l~~~ 161 (252)
T PRK07856 121 MQQQPGGGSIVNIGSVSGRRPSP---------------------------------------GTAAYGAAKAGLLNLTRS 161 (252)
T ss_pred HHhcCCCcEEEEEcccccCCCCC---------------------------------------CCchhHHHHHHHHHHHHH
Confidence 2346899999987543210 124699999999999988
Q ss_pred Hh----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 419 YL----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 419 ~~----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
++ ..+.+++++||.|..+..... ......+..+.. . .+ ..-+...+++|.+++.++....
T Consensus 162 la~e~~~~i~v~~i~Pg~v~t~~~~~~-------~~~~~~~~~~~~-~---~~-----~~~~~~p~~va~~~~~L~~~~~ 225 (252)
T PRK07856 162 LAVEWAPKVRVNAVVVGLVRTEQSELH-------YGDAEGIAAVAA-T---VP-----LGRLATPADIAWACLFLASDLA 225 (252)
T ss_pred HHHHhcCCeEEEEEEeccccChHHhhh-------ccCHHHHHHHhh-c---CC-----CCCCcCHHHHHHHHHHHcCccc
Confidence 76 338889999998866532110 011111111111 1 11 1234567999999988875322
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|.++++.++
T Consensus 226 ~~----------------i~G~~i~vdgg 238 (252)
T PRK07856 226 SY----------------VSGANLEVHGG 238 (252)
T ss_pred CC----------------ccCCEEEECCC
Confidence 11 36888888777
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=9e-08 Score=96.17 Aligned_cols=174 Identities=11% Similarity=0.033 Sum_probs=110.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh---------ccccEEEEcCccCCh---h----hhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ---------HHIHVIIHAAASLRF---D----ELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~---------~~vd~ViH~AA~v~~---~----~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
..+.++..|+++... + ...+..+. ..+|+|||+||.... . ..+..++.+|+.|+..+++++.
T Consensus 54 ~~~~~~~~D~~~~~~-~-~~~~~~~~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 131 (252)
T PRK12747 54 GSAFSIGANLESLHG-V-EALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQAL 131 (252)
T ss_pred CceEEEecccCCHHH-H-HHHHHHHHHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHH
Confidence 456788899987542 1 11122221 168999999996431 1 1245678899999999998886
Q ss_pred h-cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 341 R-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 341 ~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
. +....+||++||.+.+.... ....|+.||++.+.+++.+
T Consensus 132 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~l 172 (252)
T PRK12747 132 SRLRDNSRIINISSAATRISLP---------------------------------------DFIAYSMTKGAINTMTFTL 172 (252)
T ss_pred HHhhcCCeEEEECCcccccCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 5 22235899999987653210 1246999999999999876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++.||.|.++.... +. . ...+...... . .....+..++|+|++++.++....
T Consensus 173 a~e~~~~girvn~v~Pg~v~t~~~~~---~~---~--~~~~~~~~~~-~-------~~~~~~~~~~dva~~~~~l~s~~~ 236 (252)
T PRK12747 173 AKQLGARGITVNAILPGFIKTDMNAE---LL---S--DPMMKQYATT-I-------SAFNRLGEVEDIADTAAFLASPDS 236 (252)
T ss_pred HHHHhHcCCEEEEEecCCccCchhhh---cc---c--CHHHHHHHHh-c-------CcccCCCCHHHHHHHHHHHcCccc
Confidence 5 68999999999997763211 00 0 0111111110 0 011246789999999988864322
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|.++.+.++
T Consensus 237 ~~----------------~~G~~i~vdgg 249 (252)
T PRK12747 237 RW----------------VTGQLIDVSGG 249 (252)
T ss_pred cC----------------cCCcEEEecCC
Confidence 11 35778887765
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=2e-07 Score=93.09 Aligned_cols=168 Identities=11% Similarity=0.036 Sum_probs=107.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|+++.. ++..++ ..+|+|||||+.... ...+..++.+|+.|+.++++++..
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 126 (246)
T PRK12938 53 FDFIASEGNVGDWD------STKAAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDG 126 (246)
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788899998754 244333 358999999997531 123556889999998777666543
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||........ ....|+.+|++.+.++..+
T Consensus 127 ~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~y~~sK~a~~~~~~~l 167 (246)
T PRK12938 127 MVERGWGRIINISSVNGQKGQF---------------------------------------GQTNYSTAKAGIHGFTMSL 167 (246)
T ss_pred HHHcCCeEEEEEechhccCCCC---------------------------------------CChhHHHHHHHHHHHHHHH
Confidence 13557899999975432100 1246999999888877665
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.+.++.... . . ..++.. ..+.. ....+..+++++++++.++....
T Consensus 168 ~~~~~~~gi~v~~i~pg~~~t~~~~~-------~-~-~~~~~~-~~~~~--------~~~~~~~~~~v~~~~~~l~~~~~ 229 (246)
T PRK12938 168 AQEVATKGVTVNTVSPGYIGTDMVKA-------I-R-PDVLEK-IVATI--------PVRRLGSPDEIGSIVAWLASEES 229 (246)
T ss_pred HHHhhhhCeEEEEEEecccCCchhhh-------c-C-hHHHHH-HHhcC--------CccCCcCHHHHHHHHHHHcCccc
Confidence 4 68999999999997653210 0 0 111111 11111 12235678999999988775422
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|.++.+.++
T Consensus 230 ~~----------------~~g~~~~~~~g 242 (246)
T PRK12938 230 GF----------------STGADFSLNGG 242 (246)
T ss_pred CC----------------ccCcEEEECCc
Confidence 11 35778877665
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=4.7e-07 Score=91.11 Aligned_cols=156 Identities=9% Similarity=0.026 Sum_probs=103.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+|+.... ...+...+.+|+.|+.++++.+..
T Consensus 60 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 133 (256)
T PRK06124 60 GAAEALAFDIADEE------AVAAAFARIDAEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQR 133 (256)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999754 3444443 46999999997532 123456789999999999977754
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
+ .+..+||++||...+.... ....|+.+|.+.+.+++.+
T Consensus 134 ~~~~~~~~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 174 (256)
T PRK06124 134 MKRQGYGRIIAITSIAGQVARA---------------------------------------GDAVYPAAKQGLTGLMRAL 174 (256)
T ss_pred HHhcCCcEEEEEeechhccCCC---------------------------------------CccHhHHHHHHHHHHHHHH
Confidence 1 3457899999976542110 1246999999999988775
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+ .++.+++++||.|.++... ++ .....+...+.. . .+ ...|+++++++.+++.++...
T Consensus 175 a~e~~~~~i~v~~i~pg~v~t~~~~---~~----~~~~~~~~~~~~-~---~~-----~~~~~~~~~~a~~~~~l~~~~ 237 (256)
T PRK06124 175 AAEFGPHGITSNAIAPGYFATETNA---AM----AADPAVGPWLAQ-R---TP-----LGRWGRPEEIAGAAVFLASPA 237 (256)
T ss_pred HHHHHHhCcEEEEEEECCccCcchh---hh----ccChHHHHHHHh-c---CC-----CCCCCCHHHHHHHHHHHcCcc
Confidence 5 5899999999999876421 11 011111111111 1 11 124789999999999988653
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.77 E-value=2.6e-07 Score=93.33 Aligned_cols=162 Identities=14% Similarity=0.121 Sum_probs=102.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++. .+|+|||+|+..... ..+...+.+|+.|+.++++++...
T Consensus 54 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 127 (263)
T PRK08226 54 HRCTAVVADVRDPA------SVAAAIKRAKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPE 127 (263)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 46888999999754 3444443 579999999975321 223457899999999999987641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||........ . ....|+.+|...+.++..+
T Consensus 128 ~~~~~~~~iv~isS~~~~~~~~-------------------------------------~-~~~~Y~~sK~a~~~~~~~l 169 (263)
T PRK08226 128 MIARKDGRIVMMSSVTGDMVAD-------------------------------------P-GETAYALTKAAIVGLTKSL 169 (263)
T ss_pred HHhcCCcEEEEECcHHhcccCC-------------------------------------C-CcchHHHHHHHHHHHHHHH
Confidence 2456899999965421100 0 1145999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|+.++.++||.|.++......++.. ...+..++..+..+ .| ...+...+++|++++.++..
T Consensus 170 a~~~~~~~i~v~~i~pg~v~t~~~~~~~~~~~-~~~~~~~~~~~~~~----~p-----~~~~~~~~~va~~~~~l~~~ 237 (263)
T PRK08226 170 AVEYAQSGIRVNAICPGYVRTPMAESIARQSN-PEDPESVLTEMAKA----IP-----LRRLADPLEVGELAAFLASD 237 (263)
T ss_pred HHHhcccCcEEEEEecCcccCHHHHhhhhhcc-CCCcHHHHHHHhcc----CC-----CCCCCCHHHHHHHHHHHcCc
Confidence 5 48999999999998764322111100 01111122222111 11 12356889999998888743
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=98.77 E-value=1.8e-07 Score=93.97 Aligned_cols=115 Identities=16% Similarity=0.159 Sum_probs=82.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+..+++++...
T Consensus 49 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 122 (254)
T TIGR02415 49 GKAVAYKLDVSDKD------QVFSAIDQAAEKFGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQ 122 (254)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 46889999999754 244443 357999999987532 1234567899999999888777531
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||........ ....|+.+|++.+.+++.
T Consensus 123 ~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 163 (254)
T TIGR02415 123 FKKQGHGGKIINAASIAGHEGNP---------------------------------------ILSAYSSTKFAVRGLTQT 163 (254)
T ss_pred HHhCCCCeEEEEecchhhcCCCC---------------------------------------CCcchHHHHHHHHHHHHH
Confidence 1236899999976532110 124599999999999976
Q ss_pred Hh-----cCCCEEEecCCccccC
Q psy5825 419 YL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~ 436 (596)
+. .++.+++++||.|..+
T Consensus 164 l~~~~~~~~i~v~~v~Pg~i~t~ 186 (254)
T TIGR02415 164 AAQELAPKGITVNAYCPGIVKTP 186 (254)
T ss_pred HHHHhcccCeEEEEEecCcccCh
Confidence 54 4799999999998554
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.8e-07 Score=93.68 Aligned_cols=169 Identities=11% Similarity=0.034 Sum_probs=110.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------c-ccEEEEcCccCC---------h----hhhHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------H-IHVIIHAAASLR---------F----DELIQDAFTLNIQATREL 335 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~-vd~ViH~AA~v~---------~----~~~~~~~~~~NV~GT~~L 335 (596)
.++.++.+|++++. .+..+++ . +|+|||+|+... + ...+...+.+|+.|+.++
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l 125 (253)
T PRK08642 52 DRAIALQADVTDRE------QVQAMFATATEHFGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNT 125 (253)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHH
Confidence 46889999998754 2444443 2 899999997521 1 123445789999999999
Q ss_pred HHHHHh---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHH
Q psy5825 336 LDLATR---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIG 412 (596)
Q Consensus 336 L~~a~~---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~a 412 (596)
+++|.. ..+..+||++||........ ..+.|+.||++.
T Consensus 126 ~~~~~~~~~~~~~g~iv~iss~~~~~~~~---------------------------------------~~~~Y~~sK~a~ 166 (253)
T PRK08642 126 IQAALPGMREQGFGRIINIGTNLFQNPVV---------------------------------------PYHDYTTAKAAL 166 (253)
T ss_pred HHHHHHHHHhcCCeEEEEECCccccCCCC---------------------------------------CccchHHHHHHH
Confidence 999863 13456899999864322100 124699999999
Q ss_pred HHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHH
Q psy5825 413 ESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMML 487 (596)
Q Consensus 413 E~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii 487 (596)
+.+++.++ .|+.++.++||.|..+... + ..+..+. ....... + ...+...+|++++++
T Consensus 167 ~~l~~~la~~~~~~~i~v~~i~pG~v~t~~~~---~-----~~~~~~~-~~~~~~~---~-----~~~~~~~~~va~~~~ 229 (253)
T PRK08642 167 LGLTRNLAAELGPYGITVNMVSGGLLRTTDAS---A-----ATPDEVF-DLIAATT---P-----LRKVTTPQEFADAVL 229 (253)
T ss_pred HHHHHHHHHHhCccCeEEEEEeecccCCchhh---c-----cCCHHHH-HHHHhcC---C-----cCCCCCHHHHHHHHH
Confidence 99999876 5789999999988553211 1 1111111 1111111 1 124788999999999
Q ss_pred HHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 488 GVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.++...... ..|.++.+.++
T Consensus 230 ~l~~~~~~~----------------~~G~~~~vdgg 249 (253)
T PRK08642 230 FFASPWARA----------------VTGQNLVVDGG 249 (253)
T ss_pred HHcCchhcC----------------ccCCEEEeCCC
Confidence 888643221 36788888766
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=2.2e-07 Score=97.68 Aligned_cols=151 Identities=13% Similarity=0.124 Sum_probs=98.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|+|||+|+...+. ..+...+++|+.|+.+++..+...
T Consensus 57 ~~~~~v~~Dv~d~~------~v~~~~~~~~~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~ 130 (334)
T PRK07109 57 GEALAVVADVADAE------AVQAAADRAEEELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRH 130 (334)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999754 344443 3689999999975322 234457888988877766655431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||+..+.... ....|+.||+..+.++...
T Consensus 131 ~~~~~~g~iV~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 171 (334)
T PRK07109 131 MRPRDRGAIIQVGSALAYRSIP---------------------------------------LQSAYCAAKHAIRGFTDSL 171 (334)
T ss_pred HHhcCCcEEEEeCChhhccCCC---------------------------------------cchHHHHHHHHHHHHHHHH
Confidence 2457899999998765311 1246999999988887654
Q ss_pred h-------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
. .++.+++++||.|..+.. .|. .. .+.. .......++..++||++++.++..
T Consensus 172 ~~el~~~~~~I~v~~v~Pg~v~T~~~----~~~----------~~----~~~~---~~~~~~~~~~pe~vA~~i~~~~~~ 230 (334)
T PRK07109 172 RCELLHDGSPVSVTMVQPPAVNTPQF----DWA----------RS----RLPV---EPQPVPPIYQPEVVADAILYAAEH 230 (334)
T ss_pred HHHHhhcCCCeEEEEEeCCCccCchh----hhh----------hh----hccc---cccCCCCCCCHHHHHHHHHHHHhC
Confidence 3 368999999998855311 110 00 0000 011123467899999999999865
Q ss_pred h
Q psy5825 493 T 493 (596)
Q Consensus 493 ~ 493 (596)
+
T Consensus 231 ~ 231 (334)
T PRK07109 231 P 231 (334)
T ss_pred C
Confidence 3
|
|
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.76 E-value=1.3e-07 Score=95.02 Aligned_cols=157 Identities=10% Similarity=0.069 Sum_probs=96.7
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh----ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHH----HHHHHhc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ----HHIHVIIHAAASLRF-------DELIQDAFTLNIQATREL----LDLATRC 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~----~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~L----L~~a~~~ 342 (596)
++.++.+|+++... + ...++.+. ..+|+|||+||...+ ...+...+++|+.|+.++ +.++..
T Consensus 46 ~~~~~~~D~~~~~~-~-~~~~~~i~~~~~~~~~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~- 122 (256)
T PRK08017 46 GFTGILLDLDDPES-V-ERAADEVIALTDNRLYGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLP- 122 (256)
T ss_pred CCeEEEeecCCHHH-H-HHHHHHHHHhcCCCCeEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhh-
Confidence 46788999986542 0 00112221 357899999996432 123456889999999886 444444
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
.+..+||++||.+.+.... ....|+.||+..|.++..+.
T Consensus 123 ~~~~~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~~~~~~~~~l~~~ 163 (256)
T PRK08017 123 HGEGRIVMTSSVMGLISTP---------------------------------------GRGAYAASKYALEAWSDALRME 163 (256)
T ss_pred cCCCEEEEEcCcccccCCC---------------------------------------CccHHHHHHHHHHHHHHHHHHH
Confidence 3567899999975432100 22469999999999876542
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.+++++++|||.+..+... +.. .. .... .+...+.....+++++|+|++++.++..
T Consensus 164 ~~~~~i~v~~v~pg~~~t~~~~-------~~~-------~~-~~~~-~~~~~~~~~~~~~~~~d~a~~~~~~~~~ 222 (256)
T PRK08017 164 LRHSGIKVSLIEPGPIRTRFTD-------NVN-------QT-QSDK-PVENPGIAARFTLGPEAVVPKLRHALES 222 (256)
T ss_pred HhhcCCEEEEEeCCCcccchhh-------ccc-------ch-hhcc-chhhhHHHhhcCCCHHHHHHHHHHHHhC
Confidence 7899999999887543211 000 00 0000 0111112224579999999999999854
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=3.5e-07 Score=94.42 Aligned_cols=145 Identities=15% Similarity=0.101 Sum_probs=99.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh---------hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF---------DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++.. +..+++ .+|+||||||.... ...+...+.+|+.|+.++++++.
T Consensus 89 ~~~~~~~~Dl~d~~~------v~~~~~~~~~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 162 (293)
T PRK05866 89 GDAMAVPCDLSDLDA------VDALVADVEKRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLA 162 (293)
T ss_pred CcEEEEEccCCCHHH------HHHHHHHHHHHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 457899999997542 555544 78999999987532 12334578999999998888764
Q ss_pred h---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 341 R---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 341 ~---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
. ..+..+||++||.++++... + ....|+.||++.+.++.
T Consensus 163 ~~~~~~~~g~iv~isS~~~~~~~~-------p-------------------------------~~~~Y~asKaal~~l~~ 204 (293)
T PRK05866 163 PGMLERGDGHIINVATWGVLSEAS-------P-------------------------------LFSVYNASKAALSAVSR 204 (293)
T ss_pred HHHHhcCCcEEEEECChhhcCCCC-------C-------------------------------CcchHHHHHHHHHHHHH
Confidence 2 13567999999976653200 0 22469999999999887
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+ .|+.+++++||.|-.+...+ . .... ....+..++||+.++.++..
T Consensus 205 ~la~e~~~~gI~v~~v~pg~v~T~~~~~-----------------~-----~~~~-----~~~~~~pe~vA~~~~~~~~~ 257 (293)
T PRK05866 205 VIETEWGDRGVHSTTLYYPLVATPMIAP-----------------T-----KAYD-----GLPALTADEAAEWMVTAART 257 (293)
T ss_pred HHHHHhcccCcEEEEEEcCcccCccccc-----------------c-----cccc-----CCCCCCHHHHHHHHHHHHhc
Confidence 764 58999999999874432100 0 0000 11246789999999888864
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.75 E-value=4.8e-07 Score=92.20 Aligned_cols=115 Identities=12% Similarity=0.160 Sum_probs=83.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..++ ..+|+|||+||..... ..+...+.+|+.|+..+++++..
T Consensus 54 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 127 (272)
T PRK08589 54 GKAKAYHVDISDEQ------QVKDFASEIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLP 127 (272)
T ss_pred CeEEEEEeecCCHH------HHHHHHHHHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46889999999754 243333 3579999999975321 12455788999999888887654
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
. ..-.+||++||...+.... ....|+.||++.+.+++.+
T Consensus 128 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~l~~~l 168 (272)
T PRK08589 128 LMMEQGGSIINTSSFSGQAADL---------------------------------------YRSGYNAAKGAVINFTKSI 168 (272)
T ss_pred HHHHcCCEEEEeCchhhcCCCC---------------------------------------CCchHHHHHHHHHHHHHHH
Confidence 1 1226899999987543210 2246999999999999886
Q ss_pred h-----cCCCEEEecCCccccC
Q psy5825 420 L-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~ 436 (596)
+ .|+.++++.||.|..+
T Consensus 169 a~e~~~~gI~v~~v~PG~v~T~ 190 (272)
T PRK08589 169 AIEYGRDGIRANAIAPGTIETP 190 (272)
T ss_pred HHHhhhcCeEEEEEecCcccCc
Confidence 5 6899999999999655
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.4e-07 Score=90.15 Aligned_cols=171 Identities=11% Similarity=0.016 Sum_probs=109.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..++ ..+|+|||+||..... ..+..++.+|+.|+..++.++...
T Consensus 58 ~~~~~~~~D~~~~~~------i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (254)
T PRK06114 58 RRAIQIAADVTSKAD------LRAAVARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARA 131 (254)
T ss_pred CceEEEEcCCCCHHH------HHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence 468889999997642 44333 3479999999975421 234568899999998888776431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+.+.... +. ....|+.+|++.+.+++.+
T Consensus 132 ~~~~~~~~iv~isS~~~~~~~~------------------------------------~~-~~~~Y~~sKaa~~~l~~~l 174 (254)
T PRK06114 132 MLENGGGSIVNIASMSGIIVNR------------------------------------GL-LQAHYNASKAGVIHLSKSL 174 (254)
T ss_pred HHhcCCcEEEEECchhhcCCCC------------------------------------CC-CcchHHHHHHHHHHHHHHH
Confidence 3446899999976542110 00 1145999999999888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++.... + ........+.. ..|. .-+..++|++++++.++....
T Consensus 175 a~e~~~~gi~v~~v~PG~i~t~~~~~-~-------~~~~~~~~~~~----~~p~-----~r~~~~~dva~~~~~l~s~~~ 237 (254)
T PRK06114 175 AMEWVGRGIRVNSISPGYTATPMNTR-P-------EMVHQTKLFEE----QTPM-----QRMAKVDEMVGPAVFLLSDAA 237 (254)
T ss_pred HHHHhhcCeEEEEEeecCccCccccc-c-------cchHHHHHHHh----cCCC-----CCCcCHHHHHHHHHHHcCccc
Confidence 5 68999999999997753210 0 01111111111 1111 124668999999998875432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.++
T Consensus 238 ~~----------------~tG~~i~~dgg 250 (254)
T PRK06114 238 SF----------------CTGVDLLVDGG 250 (254)
T ss_pred cC----------------cCCceEEECcC
Confidence 21 35778887766
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=6.7e-07 Score=90.08 Aligned_cols=116 Identities=19% Similarity=0.242 Sum_probs=85.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++ ..+|+|||+|+.... ...+...+.+|+.|+.++++++..
T Consensus 60 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 133 (257)
T PRK09242 60 REVHGLAADVSDDE------DRRAILDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPL 133 (257)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 46889999998754 233333 357999999996321 123456889999999999998853
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||.+.+.... ....|+.+|...+.++..+
T Consensus 134 ~~~~~~~~ii~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 174 (257)
T PRK09242 134 LKQHASSAIVNIGSVSGLTHVR---------------------------------------SGAPYGMTKAALLQMTRNL 174 (257)
T ss_pred HHhcCCceEEEECccccCCCCC---------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 13457899999987654211 1245999999999998876
Q ss_pred h-----cCCCEEEecCCccccCC
Q psy5825 420 L-----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~ 437 (596)
+ .|++++.++||.|.++.
T Consensus 175 a~e~~~~~i~v~~i~Pg~i~t~~ 197 (257)
T PRK09242 175 AVEWAEDGIRVNAVAPWYIRTPL 197 (257)
T ss_pred HHHHHHhCeEEEEEEECCCCCcc
Confidence 5 58999999999997764
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.75 E-value=5.8e-07 Score=91.01 Aligned_cols=155 Identities=12% Similarity=0.111 Sum_probs=100.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+.+|++++...
T Consensus 59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (263)
T PRK07814 59 RRAHVVAADLAHPE------ATAGLAGQAVEAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPL 132 (263)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 46889999999754 244433 368999999986432 1234568899999999999999741
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+..+||++||.+..... . ....|+.||++.+.+++.
T Consensus 133 ~~~~~~~g~iv~~sS~~~~~~~--------------------------------------~-~~~~Y~~sK~a~~~~~~~ 173 (263)
T PRK07814 133 MLEHSGGGSVINISSTMGRLAG--------------------------------------R-GFAAYGTAKAALAHYTRL 173 (263)
T ss_pred HHhhcCCeEEEEEccccccCCC--------------------------------------C-CCchhHHHHHHHHHHHHH
Confidence 245689999997543210 0 224699999999999988
Q ss_pred Hh----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .++.++.+.||.|..+.. +.. .. ..-+.....+.. ....+..++|+|++++.++..
T Consensus 174 ~~~e~~~~i~v~~i~Pg~v~t~~~----~~~---~~-~~~~~~~~~~~~--------~~~~~~~~~~va~~~~~l~~~ 235 (263)
T PRK07814 174 AALDLCPRIRVNAIAPGSILTSAL----EVV---AA-NDELRAPMEKAT--------PLRRLGDPEDIAAAAVYLASP 235 (263)
T ss_pred HHHHHCCCceEEEEEeCCCcCchh----hhc---cC-CHHHHHHHHhcC--------CCCCCcCHHHHHHHHHHHcCc
Confidence 76 467888999988855321 100 00 011111111111 112356889999999998753
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=3.7e-07 Score=93.01 Aligned_cols=115 Identities=12% Similarity=0.186 Sum_probs=82.6
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.+.++.+|++++. .+..++ ..+|+|||+||...+. ..+...+.+|+.|+.++++++...
T Consensus 45 ~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 118 (274)
T PRK05693 45 GFTAVQLDVNDGA------ALARLAEELEAEHGGLDVLINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLL 118 (274)
T ss_pred CCeEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 4678899998653 344443 3589999999975321 234567899999999999987541
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+..+||++||++.+.... ....|+.||...+.++..+.
T Consensus 119 ~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~al~~~~~~l~~ 159 (274)
T PRK05693 119 RRSRGLVVNIGSVSGVLVTP---------------------------------------FAGAYCASKAAVHALSDALRL 159 (274)
T ss_pred hhcCCEEEEECCccccCCCC---------------------------------------CccHHHHHHHHHHHHHHHHHH
Confidence 2346799999976432100 22469999999998876654
Q ss_pred ----cCCCEEEecCCccccCC
Q psy5825 421 ----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~ 437 (596)
.|+.+++++||.|..+.
T Consensus 160 e~~~~gi~v~~v~pg~v~t~~ 180 (274)
T PRK05693 160 ELAPFGVQVMEVQPGAIASQF 180 (274)
T ss_pred HhhhhCeEEEEEecCcccccc
Confidence 68999999999997653
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.74 E-value=4.6e-07 Score=91.14 Aligned_cols=116 Identities=9% Similarity=0.087 Sum_probs=85.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++. .+|+|||+|+.... ...+...+.+|+.|+.++++++...
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (258)
T PRK06949 58 GAAHVVSLDVTDYQ------SIKAAVAHAETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKR 131 (258)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHH
Confidence 46889999999653 3444443 58999999996432 1234567899999999999887631
Q ss_pred ---CC--------CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHH
Q psy5825 343 ---SQ--------LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAI 411 (596)
Q Consensus 343 ---~~--------vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~ 411 (596)
.. ..+||++||...+.... ....|+.+|++
T Consensus 132 ~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a 172 (258)
T PRK06949 132 MIARAKGAGNTKPGGRIINIASVAGLRVLP---------------------------------------QIGLYCMSKAA 172 (258)
T ss_pred HHhcCCcCCCCCCCeEEEEECcccccCCCC---------------------------------------CccHHHHHHHH
Confidence 11 25899999987653210 22469999999
Q ss_pred HHHHHHHHh-----cCCCEEEecCCccccCC
Q psy5825 412 GESVVEKYL-----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 412 aE~lv~~~~-----~gl~~~IlRp~~V~G~~ 437 (596)
.+.++..++ .++++++++||.|+++.
T Consensus 173 ~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~ 203 (258)
T PRK06949 173 VVHMTRAMALEWGRHGINVNAICPGYIDTEI 203 (258)
T ss_pred HHHHHHHHHHHHHhcCeEEEEEeeCCCcCCc
Confidence 999998765 58999999999998864
|
|
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=98.73 E-value=1.3e-07 Score=98.83 Aligned_cols=148 Identities=14% Similarity=0.097 Sum_probs=85.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+||++.. .+..+++ .+|+|||+||.... ...+...+.+|+.|+.+|++++..
T Consensus 55 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 128 (322)
T PRK07453 55 DSYTIIHIDLGDLD------SVRRFVDDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLE 128 (322)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 46889999999654 2444443 48999999996421 123456889999999999988864
Q ss_pred c---C--CCceEEEecCcccccCC--ccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHH
Q psy5825 342 C---S--QLKAILHVSTLYTHSYR--EDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGES 414 (596)
Q Consensus 342 ~---~--~vkrfV~vSS~~v~g~~--~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~ 414 (596)
. . +..+||++||...+... ..+. .+.+.+...+......+.. .......... . ....|+.||++.+.
T Consensus 129 ~~~~~~~~~~riV~vsS~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~-~~~~Y~~SK~a~~~ 202 (322)
T PRK07453 129 DLKKSPAPDPRLVILGTVTANPKELGGKIP---IPAPADLGDLSGFEAGFKA-PISMADGKKF-K-PGKAYKDSKLCNML 202 (322)
T ss_pred HHHhCCCCCceEEEEcccccCccccCCccC---CCCccchhhhhcchhcccc-cccccCccCC-C-ccchhhHhHHHHHH
Confidence 1 1 13599999998765421 0000 0001111000000000000 0000000000 0 23579999998877
Q ss_pred HHHHHh------cCCCEEEecCCccccC
Q psy5825 415 VVEKYL------YKLPLAMVRPSIVVST 436 (596)
Q Consensus 415 lv~~~~------~gl~~~IlRp~~V~G~ 436 (596)
++..++ .|+.++++|||+|++.
T Consensus 203 ~~~~la~~~~~~~gi~v~~v~PG~v~~t 230 (322)
T PRK07453 203 TMRELHRRYHESTGITFSSLYPGCVADT 230 (322)
T ss_pred HHHHHHHhhcccCCeEEEEecCCcccCC
Confidence 766654 3799999999999864
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.73 E-value=7.2e-07 Score=89.67 Aligned_cols=156 Identities=12% Similarity=0.051 Sum_probs=99.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++.. +..+++ .+|+|||+||..... ..+...+.+|+.|+..++.++..
T Consensus 55 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 128 (254)
T PRK07478 55 GEAVALAGDVRDEAY------AKALVALAVERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIP 128 (254)
T ss_pred CcEEEEEcCCCCHHH------HHHHHHHHHHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 468899999997642 444433 689999999975321 23456789999988888776543
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||...+.... + ....|+.||++.+.++..
T Consensus 129 ~l~~~~~~~iv~~sS~~~~~~~~-------~-------------------------------~~~~Y~~sK~a~~~~~~~ 170 (254)
T PRK07478 129 AMLARGGGSLIFTSTFVGHTAGF-------P-------------------------------GMAAYAASKAGLIGLTQV 170 (254)
T ss_pred HHHhcCCceEEEEechHhhccCC-------C-------------------------------CcchhHHHHHHHHHHHHH
Confidence 1 3456899999986543100 0 124699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .|+.++++.||.|-.+... .+. ....+........ + ...+...++++++++.++..
T Consensus 171 la~e~~~~gi~v~~v~PG~v~t~~~~-------~~~-~~~~~~~~~~~~~---~-----~~~~~~~~~va~~~~~l~s~ 233 (254)
T PRK07478 171 LAAEYGAQGIRVNALLPGGTDTPMGR-------AMG-DTPEALAFVAGLH---A-----LKRMAQPEEIAQAALFLASD 233 (254)
T ss_pred HHHHHhhcCEEEEEEeeCcccCcccc-------ccc-CCHHHHHHHHhcC---C-----CCCCcCHHHHHHHHHHHcCc
Confidence 65 5799999999998554211 000 0111111111111 1 12356789999999988754
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.72 E-value=8.7e-07 Score=88.93 Aligned_cols=170 Identities=14% Similarity=0.144 Sum_probs=108.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----h---hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----D---ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----~---~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|+++.. ++..++ ..+|+|||+|+.... . ..+...+.+|+.|+..++.++..
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 130 (252)
T PRK07035 57 GKAEALACHIGEME------QIDALFAHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGK 130 (252)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 35788999998654 233333 358999999986421 1 22445789999999988877743
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||.+.+.... ....|+.||++.+.+++.
T Consensus 131 ~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~al~~~~~~ 171 (252)
T PRK07035 131 LMKEQGGGSIVNVASVNGVSPGD---------------------------------------FQGIYSITKAAVISMTKA 171 (252)
T ss_pred HHHhCCCcEEEEECchhhcCCCC---------------------------------------CCcchHHHHHHHHHHHHH
Confidence 1 3457899999975432100 124699999999999988
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|++++.+.||.|..+.... +.....++..+.. . .+ ...+...+++|++++.++...
T Consensus 172 l~~e~~~~gi~v~~i~PG~v~t~~~~~-------~~~~~~~~~~~~~-~---~~-----~~~~~~~~~va~~~~~l~~~~ 235 (252)
T PRK07035 172 FAKECAPFGIRVNALLPGLTDTKFASA-------LFKNDAILKQALA-H---IP-----LRRHAEPSEMAGAVLYLASDA 235 (252)
T ss_pred HHHHHhhcCEEEEEEeeccccCccccc-------ccCCHHHHHHHHc-c---CC-----CCCcCCHHHHHHHHHHHhCcc
Confidence 76 58999999999985543211 1111111111111 1 11 123566789999999887653
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|.++++.++
T Consensus 236 ~~~----------------~~g~~~~~dgg 249 (252)
T PRK07035 236 SSY----------------TTGECLNVDGG 249 (252)
T ss_pred ccC----------------ccCCEEEeCCC
Confidence 321 35778887665
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.70 E-value=2.1e-07 Score=96.95 Aligned_cols=127 Identities=11% Similarity=0.083 Sum_probs=83.1
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----hhhHHHHHHHHHHHHHHHHHHHHhc---
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----DELIQDAFTLNIQATRELLDLATRC--- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----~~~~~~~~~~NV~GT~~LL~~a~~~--- 342 (596)
.+.++.+||++.. .+..++ ..+|+|||+||.... ...++..+.+|+.|+..|++++...
T Consensus 72 ~v~~~~~Dl~d~~------~v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~ 145 (315)
T PRK06196 72 GVEVVMLDLADLE------SVRAFAERFLDSGRRIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAA 145 (315)
T ss_pred hCeEEEccCCCHH------HHHHHHHHHHhcCCCCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHh
Confidence 4788999999654 344443 358999999997532 1234667899999977666654421
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
.+..+||++||.+........++ . + ...+ . . ....|+.||++.+.+++.+.
T Consensus 146 ~~~~~iV~vSS~~~~~~~~~~~~-~-----~-----------------~~~~-~--~-~~~~Y~~SK~a~~~~~~~la~~ 198 (315)
T PRK06196 146 GAGARVVALSSAGHRRSPIRWDD-P-----H-----------------FTRG-Y--D-KWLAYGQSKTANALFAVHLDKL 198 (315)
T ss_pred cCCCeEEEECCHHhccCCCCccc-c-----C-----------------ccCC-C--C-hHHHHHHHHHHHHHHHHHHHHH
Confidence 34469999999764321110000 0 0 0000 0 0 12469999999999887664
Q ss_pred ---cCCCEEEecCCccccCC
Q psy5825 421 ---YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~ 437 (596)
.|+.+++++||.|.++.
T Consensus 199 ~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 199 GKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred hcCCCcEEEEeeCCcccCCc
Confidence 58999999999998864
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=1.1e-06 Score=88.25 Aligned_cols=114 Identities=13% Similarity=0.081 Sum_probs=81.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..++ ..+|+|||+|+.... ...+...+++|+.|+.+|++++...
T Consensus 50 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 123 (252)
T PRK07677 50 GQVLTVQMDVRNPED------VQKMVEQIDEKFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKY 123 (252)
T ss_pred CcEEEEEecCCCHHH------HHHHHHHHHHHhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHH
Confidence 578899999997543 44433 357999999985321 1224568899999999999998531
Q ss_pred ---C-CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---S-QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~-~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. ...+||++||.+.+.... ....|+.||+..+.+++.
T Consensus 124 ~~~~~~~g~ii~isS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~ 164 (252)
T PRK07677 124 WIEKGIKGNIINMVATYAWDAGP---------------------------------------GVIHSAAAKAGVLAMTRT 164 (252)
T ss_pred HHhcCCCEEEEEEcChhhccCCC---------------------------------------CCcchHHHHHHHHHHHHH
Confidence 1 236899999876432100 123599999999988886
Q ss_pred Hh------cCCCEEEecCCcccc
Q psy5825 419 YL------YKLPLAMVRPSIVVS 435 (596)
Q Consensus 419 ~~------~gl~~~IlRp~~V~G 435 (596)
.+ .|+++++++||.|.+
T Consensus 165 la~e~~~~~gi~v~~v~PG~v~~ 187 (252)
T PRK07677 165 LAVEWGRKYGIRVNAIAPGPIER 187 (252)
T ss_pred HHHHhCcccCeEEEEEeeccccc
Confidence 43 489999999999974
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=9.1e-07 Score=88.83 Aligned_cols=171 Identities=9% Similarity=0.020 Sum_probs=109.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++ .+|+|||+|+.... ...+...+.+|+.|+..++.++..
T Consensus 56 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 129 (253)
T PRK06172 56 GEALFVACDVTRDA------EVKALVEQTIAAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIP 129 (253)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 56899999999754 2444433 56999999996421 123455788999999888776542
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||...++... ....|+.||++.+.+++.
T Consensus 130 ~~~~~~~~~ii~~sS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~ 170 (253)
T PRK06172 130 LMLAQGGGAIVNTASVAGLGAAP---------------------------------------KMSIYAASKHAVIGLTKS 170 (253)
T ss_pred HHHhcCCcEEEEECchhhccCCC---------------------------------------CCchhHHHHHHHHHHHHH
Confidence 12446899999987665311 124699999999998877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.++++.||.|-.+...... .....+ ....... .+ ..-+...+++++.++.++...
T Consensus 171 la~e~~~~~i~v~~i~PG~v~t~~~~~~~------~~~~~~-~~~~~~~---~~-----~~~~~~p~~ia~~~~~l~~~~ 235 (253)
T PRK06172 171 AAIEYAKKGIRVNAVCPAVIDTDMFRRAY------EADPRK-AEFAAAM---HP-----VGRIGKVEEVASAVLYLCSDG 235 (253)
T ss_pred HHHHhcccCeEEEEEEeCCccChhhhhhc------ccChHH-HHHHhcc---CC-----CCCccCHHHHHHHHHHHhCcc
Confidence 66 5799999999988554321110 001111 1111111 11 112456899999998888653
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|.++++.++
T Consensus 236 ~~~----------------~~G~~i~~dgg 249 (253)
T PRK06172 236 ASF----------------TTGHALMVDGG 249 (253)
T ss_pred ccC----------------cCCcEEEECCC
Confidence 221 35788888776
|
|
| >KOG4288|consensus | Back alignment and domain information |
|---|
Probab=98.69 E-value=7e-08 Score=92.26 Aligned_cols=165 Identities=12% Similarity=0.019 Sum_probs=112.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.||+...++ +.....++..|+-|++-.. ....+..+|-....+-+.+|.. .++++|||||-...
T Consensus 96 ~~vswh~gnsfssn~------~k~~l~g~t~v~e~~ggfg---n~~~m~~ing~ani~a~kaa~~-~gv~~fvyISa~d~ 165 (283)
T KOG4288|consen 96 TYVSWHRGNSFSSNP------NKLKLSGPTFVYEMMGGFG---NIILMDRINGTANINAVKAAAK-AGVPRFVYISAHDF 165 (283)
T ss_pred cccchhhccccccCc------chhhhcCCcccHHHhcCcc---chHHHHHhccHhhHHHHHHHHH-cCCceEEEEEhhhc
Confidence 678889999876665 6667788888988887542 3334667777777778888888 69999999987532
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
|.. + - .+.||-.+|..||.-+...+ ++.-+|+|||++||.
T Consensus 166 -~~~----------~---------------------------~-i~rGY~~gKR~AE~Ell~~~-~~rgiilRPGFiyg~ 205 (283)
T KOG4288|consen 166 -GLP----------P---------------------------L-IPRGYIEGKREAEAELLKKF-RFRGIILRPGFIYGT 205 (283)
T ss_pred -CCC----------C---------------------------c-cchhhhccchHHHHHHHHhc-CCCceeeccceeecc
Confidence 210 0 0 23579999999999887765 478899999999998
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhcc---ceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGL---IHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~---~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
. ++.|.--.+......+.....+. +..++.-+.....-|+|++||.+.+.++.++
T Consensus 206 R--~v~g~~~pL~~vg~pl~~~~~~a~k~~~kLp~lg~l~~ppvnve~VA~aal~ai~dp 263 (283)
T KOG4288|consen 206 R--NVGGIKSPLHTVGEPLEMVLKFALKPLNKLPLLGPLLAPPVNVESVALAALKAIEDP 263 (283)
T ss_pred c--ccCcccccHHhhhhhHHHHHHhhhchhhcCcccccccCCCcCHHHHHHHHHHhccCC
Confidence 3 34442221111112222222222 2234445667788999999999999888654
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.69 E-value=4.5e-07 Score=91.99 Aligned_cols=156 Identities=12% Similarity=0.009 Sum_probs=99.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+|+.... ...+...+.+|+.|+.+++.++...
T Consensus 58 ~~~~~~~~Dv~~~~------~i~~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 131 (264)
T PRK07576 58 PEGLGVSADVRDYA------AVEAAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPL 131 (264)
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46788999998654 3444443 47999999985321 1234567889999999999988641
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
....+||++||...+.... ....|+.||+..+.+++...
T Consensus 132 l~~~~g~iv~iss~~~~~~~~---------------------------------------~~~~Y~asK~a~~~l~~~la 172 (264)
T PRK07576 132 LRRPGASIIQISAPQAFVPMP---------------------------------------MQAHVCAAKAGVDMLTRTLA 172 (264)
T ss_pred HHhCCCEEEEECChhhccCCC---------------------------------------CccHHHHHHHHHHHHHHHHH
Confidence 1225899999976542100 12469999999999998764
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|+.+++++||.+.+... ...+. +...+....... ++ ...++...|+|.+++.++..
T Consensus 173 ~e~~~~gi~v~~v~pg~~~~t~~--~~~~~-----~~~~~~~~~~~~---~~-----~~~~~~~~dva~~~~~l~~~ 234 (264)
T PRK07576 173 LEWGPEGIRVNSIVPGPIAGTEG--MARLA-----PSPELQAAVAQS---VP-----LKRNGTKQDIANAALFLASD 234 (264)
T ss_pred HHhhhcCeEEEEEecccccCcHH--Hhhcc-----cCHHHHHHHHhc---CC-----CCCCCCHHHHHHHHHHHcCh
Confidence 679999999998865311 00110 111111111111 11 12356789999999998854
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.68 E-value=9.6e-07 Score=90.21 Aligned_cols=198 Identities=14% Similarity=0.054 Sum_probs=111.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh------ccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhc-CCCceEE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ------HHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRC-SQLKAIL 349 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~------~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV 349 (596)
.++.++.+|++++.. +..++ ..+|+|||+||.......+..++.+|+.|+.+|++++... ..-.++|
T Consensus 49 ~~~~~~~~Dv~d~~~------i~~~~~~~~~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv 122 (275)
T PRK06940 49 FDVSTQEVDVSSRES------VKALAATAQTLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGV 122 (275)
T ss_pred CeEEEEEeecCCHHH------HHHHHHHHHhcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEE
Confidence 468899999997642 44443 3589999999986555567789999999999999998752 1123567
Q ss_pred EecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhh---hhhcCCCCCchHHHHHHHHHHHHHHHh-----c
Q psy5825 350 HVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILS---SMLFGGIYNNSYSFTKAIGESVVEKYL-----Y 421 (596)
Q Consensus 350 ~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~---p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~ 421 (596)
++||.+.........+.. ..+ ..++...+.... +..... ....|+.||++.+.+++..+ .
T Consensus 123 ~isS~~~~~~~~~~~~~~--~~~---------~~~~~~~~~~~~~~~~~~~~~-~~~~Y~asKaa~~~~~~~la~e~~~~ 190 (275)
T PRK06940 123 VIASQSGHRLPALTAEQE--RAL---------ATTPTEELLSLPFLQPDAIED-SLHAYQIAKRANALRVMAEAVKWGER 190 (275)
T ss_pred EEEecccccCcccchhhh--ccc---------cccccccccccccccccccCC-ccchhHHHHHHHHHHHHHHHHHHccC
Confidence 777765432110000000 000 000000000000 000000 12469999999988887654 6
Q ss_pred CCCEEEecCCccccCCCCCccccCCCCCCc-HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCC
Q psy5825 422 KLPLAMVRPSIVVSTWKEPIVGWSNNLYGP-GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHV 500 (596)
Q Consensus 422 gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~-~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~ 500 (596)
|+.++.+.||.|..+.... .+... ......+. . ..+. --+...+++|++++.++......
T Consensus 191 gIrvn~i~PG~v~T~~~~~------~~~~~~~~~~~~~~-~---~~p~-----~r~~~peeia~~~~fL~s~~~~~---- 251 (275)
T PRK06940 191 GARINSISPGIISTPLAQD------ELNGPRGDGYRNMF-A---KSPA-----GRPGTPDEIAALAEFLMGPRGSF---- 251 (275)
T ss_pred CeEEEEeccCcCcCccchh------hhcCCchHHHHHHh-h---hCCc-----ccCCCHHHHHHHHHHHcCcccCc----
Confidence 8999999999996653210 00000 01111111 1 1111 12677899999998887432221
Q ss_pred CCCCCcCCCCCCCCCCeEEccCC
Q psy5825 501 APPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 501 ~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|.++.+.++
T Consensus 252 ------------itG~~i~vdgg 262 (275)
T PRK06940 252 ------------ITGSDFLVDGG 262 (275)
T ss_pred ------------ccCceEEEcCC
Confidence 35777777665
|
|
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=5.9e-07 Score=93.18 Aligned_cols=126 Identities=13% Similarity=0.091 Sum_probs=79.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-----hhHHHHHHHHHHH----HHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-----ELIQDAFTLNIQA----TRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-----~~~~~~~~~NV~G----T~~LL~~a~ 340 (596)
.++.++.+||++... +..++. .+|+|||+||..... ..+...+.+|+.| |..|+.++.
T Consensus 67 ~~~~~~~~Dl~d~~~------v~~~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~ 140 (306)
T PRK06197 67 ADVTLQELDLTSLAS------VRAAADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLL 140 (306)
T ss_pred CceEEEECCCCCHHH------HHHHHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHh
Confidence 468899999997542 444433 589999999975322 2345578999999 556666665
Q ss_pred hcCCCceEEEecCcccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 341 RCSQLKAILHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 341 ~~~~vkrfV~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
. .+..+||++||.+.+.... ..++ .++ . .+ . . ....|+.||++.+.++..+
T Consensus 141 ~-~~~~~iV~vSS~~~~~~~~~~~~~------~~~---------------~--~~-~--~-~~~~Y~~SK~a~~~~~~~l 192 (306)
T PRK06197 141 P-VPGSRVVTVSSGGHRIRAAIHFDD------LQW---------------E--RR-Y--N-RVAAYGQSKLANLLFTYEL 192 (306)
T ss_pred h-CCCCEEEEECCHHHhccCCCCccc------cCc---------------c--cC-C--C-cHHHHHHHHHHHHHHHHHH
Confidence 5 3457999999987543111 0100 000 0 00 0 0 2256999999999998876
Q ss_pred h-----cCCCEEE--ecCCccccC
Q psy5825 420 L-----YKLPLAM--VRPSIVVST 436 (596)
Q Consensus 420 ~-----~gl~~~I--lRp~~V~G~ 436 (596)
+ .|+++++ +.||.|..+
T Consensus 193 a~~l~~~~i~v~~v~~~PG~v~T~ 216 (306)
T PRK06197 193 QRRLAAAGATTIAVAAHPGVSNTE 216 (306)
T ss_pred HHHhhcCCCCeEEEEeCCCcccCc
Confidence 5 4666554 479888554
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=7.3e-07 Score=89.00 Aligned_cols=143 Identities=12% Similarity=0.126 Sum_probs=99.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc----ccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc-CC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH----IHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC-SQ 344 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~----vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~-~~ 344 (596)
.++.++.+|+++.. ++..++.. .|++||+|+...+. ..+...+.+|+.|+.++++++... ..
T Consensus 46 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~d~~i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 119 (240)
T PRK06101 46 ANIFTLAFDVTDHP------GTKAALSQLPFIPELWIFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLSC 119 (240)
T ss_pred CCCeEEEeeCCCHH------HHHHHHHhcccCCCEEEEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 46889999999654 46666554 58999999864321 123468899999999999998752 23
Q ss_pred CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----
Q psy5825 345 LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---- 420 (596)
Q Consensus 345 vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---- 420 (596)
..+||++||....... . ....|+.||+..+.+++.+.
T Consensus 120 ~~~iv~isS~~~~~~~--------------------------------------~-~~~~Y~asK~a~~~~~~~l~~e~~ 160 (240)
T PRK06101 120 GHRVVIVGSIASELAL--------------------------------------P-RAEAYGASKAAVAYFARTLQLDLR 160 (240)
T ss_pred CCeEEEEechhhccCC--------------------------------------C-CCchhhHHHHHHHHHHHHHHHHHH
Confidence 3579999886532110 0 12469999999999987654
Q ss_pred -cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|+.++++|||.|+++.... .. . . ...+++.+++|..++.++..
T Consensus 161 ~~gi~v~~v~pg~i~t~~~~~-------~~-------------~---~-----~~~~~~~~~~a~~i~~~i~~ 205 (240)
T PRK06101 161 PKGIEVVTVFPGFVATPLTDK-------NT-------------F---A-----MPMIITVEQASQEIRAQLAR 205 (240)
T ss_pred hcCceEEEEeCCcCCCCCcCC-------CC-------------C---C-----CCcccCHHHHHHHHHHHHhc
Confidence 68999999999998753210 00 0 0 01247899999999988865
|
|
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.67 E-value=6.2e-07 Score=90.72 Aligned_cols=115 Identities=14% Similarity=0.118 Sum_probs=83.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh------hhhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF------DELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|+++.. ++..+++ .+|+|||+|+.... ...+...+.+|+.|+.++++++...
T Consensus 52 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~ 125 (261)
T PRK08265 52 ERARFIATDITDDA------AIERAVATVVARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHL 125 (261)
T ss_pred CeeEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHH
Confidence 56889999999754 3444433 57999999996421 2345568899999999999987641
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....+||++||.+...... ....|+.+|+..+.+++..+
T Consensus 126 ~~~~g~ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~la~ 166 (261)
T PRK08265 126 ARGGGAIVNFTSISAKFAQT---------------------------------------GRWLYPASKAAIRQLTRSMAM 166 (261)
T ss_pred hcCCcEEEEECchhhccCCC---------------------------------------CCchhHHHHHHHHHHHHHHHH
Confidence 2336899999976532100 11359999999999887765
Q ss_pred ----cCCCEEEecCCccccC
Q psy5825 421 ----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~ 436 (596)
.|+.+++++||.|..+
T Consensus 167 e~~~~gi~vn~v~PG~~~t~ 186 (261)
T PRK08265 167 DLAPDGIRVNSVSPGWTWSR 186 (261)
T ss_pred HhcccCEEEEEEccCCccCh
Confidence 5899999999988554
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.66 E-value=1.1e-06 Score=87.86 Aligned_cols=115 Identities=18% Similarity=0.161 Sum_probs=84.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc----cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH----HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC--- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~----~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~--- 342 (596)
.++.++.+|++++.. +..+++ .+|+|||+|+..... ..+..++.+|+.|+.++++++...
T Consensus 51 ~~~~~~~~Dl~~~~~------~~~~~~~~~~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~ 124 (243)
T PRK07102 51 VAVSTHELDILDTAS------HAAFLDSLPALPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEA 124 (243)
T ss_pred CeEEEEecCCCChHH------HHHHHHHHhhcCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHh
Confidence 578999999997642 444443 469999999865321 223457889999999999887641
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
.+..+||++||........ ....|+.+|+..+.++..++
T Consensus 125 ~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l~~e 165 (243)
T PRK07102 125 RGSGTIVGISSVAGDRGRA---------------------------------------SNYVYGSAKAALTAFLSGLRNR 165 (243)
T ss_pred CCCCEEEEEecccccCCCC---------------------------------------CCcccHHHHHHHHHHHHHHHHH
Confidence 3467899999975322100 11359999999999887764
Q ss_pred ---cCCCEEEecCCccccC
Q psy5825 421 ---YKLPLAMVRPSIVVST 436 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~ 436 (596)
.|+++++++||.|.++
T Consensus 166 l~~~gi~v~~v~pg~v~t~ 184 (243)
T PRK07102 166 LFKSGVHVLTVKPGFVRTP 184 (243)
T ss_pred hhccCcEEEEEecCcccCh
Confidence 6899999999999775
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.65 E-value=3.7e-07 Score=92.87 Aligned_cols=143 Identities=15% Similarity=0.105 Sum_probs=97.8
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
++.++.+|++++. ++..++ ..+|+|||+||..... ..+..++.+|+.|+.++++.+...
T Consensus 51 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 124 (273)
T PRK07825 51 LVVGGPLDVTDPA------SFAAFLDAVEADLGPIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRM 124 (273)
T ss_pred cceEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788999999754 233332 4579999999975321 234568899999999988877531
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..+||++||.+.+.... ....|+.||+..+.++....
T Consensus 125 ~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~l~ 165 (273)
T PRK07825 125 VPRGRGHVVNVASLAGKIPVP---------------------------------------GMATYCASKHAVVGFTDAAR 165 (273)
T ss_pred HhCCCCEEEEEcCccccCCCC---------------------------------------CCcchHHHHHHHHHHHHHHH
Confidence 3556899999987543210 12459999998887665543
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|+++++++||.|..+... +. . ......++.++|+|++++.++..
T Consensus 166 ~el~~~gi~v~~v~Pg~v~t~~~~---------------------~~----~--~~~~~~~~~~~~va~~~~~~l~~ 215 (273)
T PRK07825 166 LELRGTGVHVSVVLPSFVNTELIA---------------------GT----G--GAKGFKNVEPEDVAAAIVGTVAK 215 (273)
T ss_pred HHhhccCcEEEEEeCCcCcchhhc---------------------cc----c--cccCCCCCCHHHHHHHHHHHHhC
Confidence 6899999999988443110 00 0 01123478999999999998865
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=1.2e-06 Score=88.46 Aligned_cols=145 Identities=17% Similarity=0.083 Sum_probs=93.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--ccccEEEEcCccCChhh----h---HHHHHHHHHHHHHHH----HHHHHhcC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--HHIHVIIHAAASLRFDE----L---IQDAFTLNIQATREL----LDLATRCS 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--~~vd~ViH~AA~v~~~~----~---~~~~~~~NV~GT~~L----L~~a~~~~ 343 (596)
.+++++.+|++++.. -...++.+. ..+|++||+||...... . ....+.+|+.|+..+ +.++.. .
T Consensus 60 ~~v~~~~~D~~~~~~--~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~-~ 136 (253)
T PRK07904 60 SSVEVIDFDALDTDS--HPKVIDAAFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRA-Q 136 (253)
T ss_pred CceEEEEecCCChHH--HHHHHHHHHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHh-c
Confidence 368999999997542 011122332 36999999998753211 1 123689999998875 445554 4
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
+..+||++||...+.... ....|+.||++...+.....
T Consensus 137 ~~~~iv~isS~~g~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~l~~el 177 (253)
T PRK07904 137 GFGQIIAMSSVAGERVRR---------------------------------------SNFVYGSTKAGLDGFYLGLGEAL 177 (253)
T ss_pred CCceEEEEechhhcCCCC---------------------------------------CCcchHHHHHHHHHHHHHHHHHH
Confidence 568999999986422100 11359999999887665543
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|+++++++||.|..+.. . . .. . ....+..++||+.++.++..
T Consensus 178 ~~~~i~v~~v~Pg~v~t~~~-------~--------------~-~~---~----~~~~~~~~~~A~~i~~~~~~ 222 (253)
T PRK07904 178 REYGVRVLVVRPGQVRTRMS-------A--------------H-AK---E----APLTVDKEDVAKLAVTAVAK 222 (253)
T ss_pred hhcCCEEEEEeeCceecchh-------c--------------c-CC---C----CCCCCCHHHHHHHHHHHHHc
Confidence 789999999999955311 0 0 00 0 01247889999999988864
|
|
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.64 E-value=2.2e-06 Score=86.90 Aligned_cols=117 Identities=11% Similarity=0.154 Sum_probs=85.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+++.. .+..+++ .+|+|||+||.... ...+...+.+|+.|+..++.++...
T Consensus 59 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (265)
T PRK07097 59 IEAHGYVCDVTDED------GVQAMVSQIEKEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPS 132 (265)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46889999999654 2444443 48999999997542 1234557889999999888887531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||........ ....|+.+|.+.+.+++.+
T Consensus 133 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sKaal~~l~~~l 173 (265)
T PRK07097 133 MIKKGHGKIINICSMMSELGRE---------------------------------------TVSAYAAAKGGLKMLTKNI 173 (265)
T ss_pred HHhcCCcEEEEEcCccccCCCC---------------------------------------CCccHHHHHHHHHHHHHHH
Confidence 3457899999975321100 1245999999999999887
Q ss_pred h-----cCCCEEEecCCccccCCC
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWK 438 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~ 438 (596)
+ .|+.++.++||.|..+..
T Consensus 174 a~e~~~~gi~v~~v~Pg~v~t~~~ 197 (265)
T PRK07097 174 ASEYGEANIQCNGIGPGYIATPQT 197 (265)
T ss_pred HHHhhhcCceEEEEEeccccccch
Confidence 6 589999999999977643
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.63 E-value=9.5e-07 Score=98.59 Aligned_cols=171 Identities=13% Similarity=0.083 Sum_probs=111.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----h---hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----D---ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----~---~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++.. +..++ ..+|+|||+|+.... . ..+..++.+|+.|+.++++++..
T Consensus 315 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 388 (520)
T PRK06484 315 DEHLSVQADITDEAA------VESAFAQIQARWGRLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAAR 388 (520)
T ss_pred CceeEEEccCCCHHH------HHHHHHHHHHHcCCCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHH
Confidence 467788999997642 44443 348999999997531 1 23456889999999999999875
Q ss_pred -cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 -CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 -~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
+.+..+||++||.+.+.... ....|+.||+..+.+++.++
T Consensus 389 ~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~l~~~la 429 (520)
T PRK06484 389 LMSQGGVIVNLGSIASLLALP---------------------------------------PRNAYCASKAAVTMLSRSLA 429 (520)
T ss_pred HhccCCEEEEECchhhcCCCC---------------------------------------CCchhHHHHHHHHHHHHHHH
Confidence 22346899999987653210 12469999999999998765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|++++++.||.|..+.... .............. .++. .-+..++|+|++++.++.....
T Consensus 430 ~e~~~~gI~vn~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~---~~~~-----~~~~~~~dia~~~~~l~s~~~~ 494 (520)
T PRK06484 430 CEWAPAGIRVNTVAPGYIETPAVLA-------LKASGRADFDSIRR---RIPL-----GRLGDPEEVAEAIAFLASPAAS 494 (520)
T ss_pred HHhhhhCeEEEEEEeCCccCchhhh-------hccccHHHHHHHHh---cCCC-----CCCcCHHHHHHHHHHHhCcccc
Confidence 58999999999997653210 00000111111111 1111 1256789999999988754321
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|+++.+.++
T Consensus 495 ~----------------~~G~~i~vdgg 506 (520)
T PRK06484 495 Y----------------VNGATLTVDGG 506 (520)
T ss_pred C----------------ccCcEEEECCC
Confidence 1 35788888766
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=3.6e-07 Score=94.86 Aligned_cols=111 Identities=17% Similarity=0.133 Sum_probs=79.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++.. +..++ ..+|+|||+||.... ...+...+.+|+.|+.+++++|...
T Consensus 62 ~~~~~~~~Dv~d~~~------~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~ 135 (306)
T PRK07792 62 AKAVAVAGDISQRAT------ADELVATAVGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAAYW 135 (306)
T ss_pred CeEEEEeCCCCCHHH------HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 468899999997542 44333 468999999997642 1234568899999999999987531
Q ss_pred -C--------CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHH
Q psy5825 343 -S--------QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413 (596)
Q Consensus 343 -~--------~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE 413 (596)
. ...+||++||.+.+.... ....|+.+|++.+
T Consensus 136 ~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~ 176 (306)
T PRK07792 136 RAKAKAAGGPVYGRIVNTSSEAGLVGPV---------------------------------------GQANYGAAKAGIT 176 (306)
T ss_pred HHhhcccCCCCCcEEEEECCcccccCCC---------------------------------------CCchHHHHHHHHH
Confidence 0 014899999976543110 1135999999999
Q ss_pred HHHHHHh-----cCCCEEEecCCc
Q psy5825 414 SVVEKYL-----YKLPLAMVRPSI 432 (596)
Q Consensus 414 ~lv~~~~-----~gl~~~IlRp~~ 432 (596)
.++..++ .|+.++++.|+.
T Consensus 177 ~l~~~la~e~~~~gI~vn~i~Pg~ 200 (306)
T PRK07792 177 ALTLSAARALGRYGVRANAICPRA 200 (306)
T ss_pred HHHHHHHHHhhhcCeEEEEECCCC
Confidence 9987755 588999999873
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=5.4e-07 Score=90.93 Aligned_cols=115 Identities=16% Similarity=0.055 Sum_probs=84.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|+++... +..++ ..+|+||||||.... ...+...+.+|+.|+.+++++|..
T Consensus 48 ~~~~~~~~D~~~~~~------v~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 121 (260)
T PRK08267 48 GNAWTGALDVTDRAA------WDAALADFAAATGGRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALP 121 (260)
T ss_pred CceEEEEecCCCHHH------HHHHHHHHHHHcCCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 478999999987542 44433 356999999997542 123566899999999999998853
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||...+.... ....|+.||+..+.++..
T Consensus 122 ~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~ 162 (260)
T PRK08267 122 YLKATPGARVINTSSASAIYGQP---------------------------------------GLAVYSATKFAVRGLTEA 162 (260)
T ss_pred HHHhCCCCEEEEeCchhhCcCCC---------------------------------------CchhhHHHHHHHHHHHHH
Confidence 1 2457899999975432100 124699999999988877
Q ss_pred Hh-----cCCCEEEecCCccccC
Q psy5825 419 YL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~ 436 (596)
++ .++++++++||.|...
T Consensus 163 l~~~~~~~~i~v~~i~pg~~~t~ 185 (260)
T PRK08267 163 LDLEWRRHGIRVADVMPLFVDTA 185 (260)
T ss_pred HHHHhcccCcEEEEEecCCcCCc
Confidence 65 6899999999998654
|
|
| >KOG3019|consensus | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.9e-07 Score=89.01 Aligned_cols=149 Identities=17% Similarity=0.097 Sum_probs=96.7
Q ss_pred HHHHHHHHHHHHhcCCC-ceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchH
Q psy5825 329 IQATRELLDLATRCSQL-KAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSY 405 (596)
Q Consensus 329 V~GT~~LL~~a~~~~~v-krfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y 405 (596)
+..|..|.++....+.. +.+|.+|..++|-... .++|+.....+ .|
T Consensus 105 i~~t~~la~aI~~aPq~~~~~Vlv~gva~y~pS~s~eY~e~~~~qgf-------------------------------d~ 153 (315)
T KOG3019|consen 105 IRVTSKLADAINNAPQEARPTVLVSGVAVYVPSESQEYSEKIVHQGF-------------------------------DI 153 (315)
T ss_pred eeHHHHHHHHHhcCCCCCCCeEEEEeeEEeccccccccccccccCCh-------------------------------HH
Confidence 34466777777765544 4899999999987532 23332211110 11
Q ss_pred H---HHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHH
Q psy5825 406 S---FTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVA 482 (596)
Q Consensus 406 ~---~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdv 482 (596)
- ..+|.+-.+. .....+++++|.|.|.|..- |. ...|+.-+..|.- --.|++++++.||||||+
T Consensus 154 ~srL~l~WE~aA~~--~~~~~r~~~iR~GvVlG~gG----Ga------~~~M~lpF~~g~G-GPlGsG~Q~fpWIHv~DL 220 (315)
T KOG3019|consen 154 LSRLCLEWEGAALK--ANKDVRVALIRIGVVLGKGG----GA------LAMMILPFQMGAG-GPLGSGQQWFPWIHVDDL 220 (315)
T ss_pred HHHHHHHHHHHhhc--cCcceeEEEEEEeEEEecCC----cc------hhhhhhhhhhccC-CcCCCCCeeeeeeehHHH
Confidence 1 1233332211 11458899999999999731 21 1122333333322 224788999999999999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 483 TNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 483 a~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
|+.|..++.++. ...+.|-+.+ ++++..||++.+..+++
T Consensus 221 ~~li~~ale~~~-------------------v~GViNgvAP--~~~~n~Ef~q~lg~aL~ 259 (315)
T KOG3019|consen 221 VNLIYEALENPS-------------------VKGVINGVAP--NPVRNGEFCQQLGSALS 259 (315)
T ss_pred HHHHHHHHhcCC-------------------CCceecccCC--CccchHHHHHHHHHHhC
Confidence 999999998753 3568898888 89999999999999887
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=8.5e-07 Score=88.70 Aligned_cols=155 Identities=14% Similarity=0.121 Sum_probs=97.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh----h----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF----D----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~----~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++.. +..++ ..+|+|||+|+.... . ..+...+.+|+.|+.+++..+..
T Consensus 52 ~~~~~~~~Dl~~~~~------~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 125 (248)
T PRK06947 52 GRACVVAGDVANEAD------VIAMFDAVQSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAAR 125 (248)
T ss_pred CcEEEEEeccCCHHH------HHHHHHHHHHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 478899999997642 33332 358999999996421 1 12345789999999999765443
Q ss_pred -cC--C---CceEEEecCcccc-cCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHH
Q psy5825 342 -CS--Q---LKAILHVSTLYTH-SYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGES 414 (596)
Q Consensus 342 -~~--~---vkrfV~vSS~~v~-g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~ 414 (596)
+. + -.+||++||++.+ +... ....|+.||+..+.
T Consensus 126 ~~~~~~~~~~~~ii~~sS~~~~~~~~~---------------------------------------~~~~Y~~sK~~~~~ 166 (248)
T PRK06947 126 RLSTDRGGRGGAIVNVSSIASRLGSPN---------------------------------------EYVDYAGSKGAVDT 166 (248)
T ss_pred HHHhcCCCCCcEEEEECchhhcCCCCC---------------------------------------CCcccHhhHHHHHH
Confidence 21 1 2359999997643 3100 01359999999998
Q ss_pred HHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHH
Q psy5825 415 VVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGV 489 (596)
Q Consensus 415 lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~ 489 (596)
++..++ .|++++++|||.|..+... + .+..... ...... .+. --+..+++++.+++.+
T Consensus 167 ~~~~la~~~~~~~i~v~~i~Pg~v~t~~~~----~----~~~~~~~-~~~~~~---~~~-----~~~~~~e~va~~~~~l 229 (248)
T PRK06947 167 LTLGLAKELGPHGVRVNAVRPGLIETEIHA----S----GGQPGRA-ARLGAQ---TPL-----GRAGEADEVAETIVWL 229 (248)
T ss_pred HHHHHHHHhhhhCcEEEEEeccCccccccc----c----cCCHHHH-HHHhhc---CCC-----CCCcCHHHHHHHHHHH
Confidence 887765 4899999999999765321 0 0001111 111111 111 1146789999999988
Q ss_pred HHhh
Q psy5825 490 VWKT 493 (596)
Q Consensus 490 ~~~~ 493 (596)
+...
T Consensus 230 ~~~~ 233 (248)
T PRK06947 230 LSDA 233 (248)
T ss_pred cCcc
Confidence 7553
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.62 E-value=1.6e-06 Score=86.70 Aligned_cols=117 Identities=19% Similarity=0.196 Sum_probs=81.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH-------hccccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI-------QHHIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l-------~~~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|+...+ ..++..+ ...+|+|||+|+.... ...+...+.+|+.|+.++++++..
T Consensus 62 ~~~~~~~~d~~~~~----~~~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~ 137 (247)
T PRK08945 62 PQPAIIPLDLLTAT----PQNYQQLADTIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLP 137 (247)
T ss_pred CCceEEEecccCCC----HHHHHHHHHHHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHH
Confidence 46788889986422 1222222 2368999999987432 123456889999999999888742
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||........ ....|+.||++++.++..
T Consensus 138 ~l~~~~~~~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 178 (247)
T PRK08945 138 LLLKSPAASLVFTSSSVGRQGRA---------------------------------------NWGAYAVSKFATEGMMQV 178 (247)
T ss_pred HHHhCCCCEEEEEccHhhcCCCC---------------------------------------CCcccHHHHHHHHHHHHH
Confidence 13567999999976432100 124599999999999887
Q ss_pred Hh-----cCCCEEEecCCccccC
Q psy5825 419 YL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~ 436 (596)
+. .++.+++++||.|-++
T Consensus 179 ~~~~~~~~~i~~~~v~pg~v~t~ 201 (247)
T PRK08945 179 LADEYQGTNLRVNCINPGGTRTA 201 (247)
T ss_pred HHHHhcccCEEEEEEecCCccCc
Confidence 65 5788889999887543
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=6.9e-07 Score=89.38 Aligned_cols=143 Identities=13% Similarity=0.062 Sum_probs=98.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++ .++|+|||+||..... ..+...+.+|+.|+.++++++...
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 126 (248)
T PRK08251 53 IKVAVAALDVNDHD------QVFEVFAEFRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEI 126 (248)
T ss_pred ceEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46899999999764 243333 3689999999875321 233457889999999999887531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||........ + ....|+.||++.+.++..+
T Consensus 127 ~~~~~~~~iv~~sS~~~~~~~~------------------------------------~--~~~~Y~~sK~a~~~~~~~l 168 (248)
T PRK08251 127 FREQGSGHLVLISSVSAVRGLP------------------------------------G--VKAAYAASKAGVASLGEGL 168 (248)
T ss_pred HHhcCCCeEEEEeccccccCCC------------------------------------C--CcccHHHHHHHHHHHHHHH
Confidence 3567899999976532100 0 1246999999999888765
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
. .++.+++++||.|.++... +. +. ...+++.+++|++|+.++..
T Consensus 169 ~~~~~~~~i~v~~v~pg~v~t~~~~---------------------~~-----~~---~~~~~~~~~~a~~i~~~~~~ 217 (248)
T PRK08251 169 RAELAKTPIKVSTIEPGYIRSEMNA---------------------KA-----KS---TPFMVDTETGVKALVKAIEK 217 (248)
T ss_pred HHHhcccCcEEEEEecCcCcchhhh---------------------cc-----cc---CCccCCHHHHHHHHHHHHhc
Confidence 5 5789999999998654210 00 00 11357789999999988854
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.61 E-value=2.8e-07 Score=105.65 Aligned_cols=176 Identities=12% Similarity=0.051 Sum_probs=108.2
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh--
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR-- 341 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~-- 341 (596)
++.++.+|++++. ++..+++ ++|+|||+||..... ..+...+.+|+.|...++..+..
T Consensus 466 ~~~~v~~Dvtd~~------~v~~a~~~i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m 539 (676)
T TIGR02632 466 RAVALKMDVTDEQ------AVKAAFADVALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQM 539 (676)
T ss_pred cEEEEECCCCCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778999999754 3555444 689999999975321 22445788999998877655542
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.....+|||+||...+.... ....|+.||++.+.+++.+
T Consensus 540 ~~~~~~g~IV~iSS~~a~~~~~---------------------------------------~~~aY~aSKaA~~~l~r~l 580 (676)
T TIGR02632 540 REQGLGGNIVFIASKNAVYAGK---------------------------------------NASAYSAAKAAEAHLARCL 580 (676)
T ss_pred HhcCCCCEEEEEeChhhcCCCC---------------------------------------CCHHHHHHHHHHHHHHHHH
Confidence 11235899999976432110 1246999999999999876
Q ss_pred h-----cCCCEEEecCCccc-cCCCCCccccCCCCC---Cc-HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHH
Q psy5825 420 L-----YKLPLAMVRPSIVV-STWKEPIVGWSNNLY---GP-GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGV 489 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~-G~~~~p~~G~~~~~~---~~-~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~ 489 (596)
+ .|+.++.++|+.|+ |.... ..+|..... +. ..-+.. ++........++..+|||++++.+
T Consensus 581 A~el~~~gIrVn~V~Pg~V~~~s~~~-~~~~~~~~~~~~~~~~~~~~~--------~~~~r~~l~r~v~peDVA~av~~L 651 (676)
T TIGR02632 581 AAEGGTYGIRVNTVNPDAVLQGSGIW-DGEWREERAAAYGIPADELEE--------HYAKRTLLKRHIFPADIAEAVFFL 651 (676)
T ss_pred HHHhcccCeEEEEEECCceecCcccc-cccchhhhhhcccCChHHHHH--------HHHhcCCcCCCcCHHHHHHHHHHH
Confidence 5 57999999999886 32110 011111000 00 000000 011112223568889999999988
Q ss_pred HHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 490 VWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
+...... ..|.++++.+|
T Consensus 652 ~s~~~~~----------------~TG~~i~vDGG 669 (676)
T TIGR02632 652 ASSKSEK----------------TTGCIITVDGG 669 (676)
T ss_pred hCCcccC----------------CcCcEEEECCC
Confidence 7533221 35789998877
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.61 E-value=1.3e-06 Score=87.82 Aligned_cols=169 Identities=13% Similarity=0.041 Sum_probs=108.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..++ ..+|+|||+|+..... ..+..++.+|+.|+..+++++...
T Consensus 58 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 131 (253)
T PRK05867 58 GKVVPVCCDVSQHQQ------VTSMLDQVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKA 131 (253)
T ss_pred CeEEEEEccCCCHHH------HHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHH
Confidence 468889999997542 44433 3689999999975421 234557899999999999988641
Q ss_pred ---CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+ ..++|++||.+...... + . ....|+.||++.+.+++.
T Consensus 132 ~~~~~~~g~iv~~sS~~~~~~~~--------------------------------~----~-~~~~Y~asKaal~~~~~~ 174 (253)
T PRK05867 132 MVKQGQGGVIINTASMSGHIINV--------------------------------P----Q-QVSHYCASKAAVIHLTKA 174 (253)
T ss_pred HHhcCCCcEEEEECcHHhcCCCC--------------------------------C----C-CccchHHHHHHHHHHHHH
Confidence 11 24789998875421100 0 0 113599999999999988
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.+.++.||.|-.+... .. ......+.. ..+ .--+...+++|++++.++...
T Consensus 175 la~e~~~~gI~vn~i~PG~v~t~~~~-------~~---~~~~~~~~~----~~~-----~~r~~~p~~va~~~~~L~s~~ 235 (253)
T PRK05867 175 MAVELAPHKIRVNSVSPGYILTELVE-------PY---TEYQPLWEP----KIP-----LGRLGRPEELAGLYLYLASEA 235 (253)
T ss_pred HHHHHhHhCeEEEEeecCCCCCcccc-------cc---hHHHHHHHh----cCC-----CCCCcCHHHHHHHHHHHcCcc
Confidence 75 6899999999999554221 11 111111111 111 113567899999999887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|+++.+.+|
T Consensus 236 ~~~----------------~tG~~i~vdgG 249 (253)
T PRK05867 236 SSY----------------MTGSDIVIDGG 249 (253)
T ss_pred cCC----------------cCCCeEEECCC
Confidence 221 35778887766
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.5e-06 Score=89.81 Aligned_cols=157 Identities=11% Similarity=0.033 Sum_probs=102.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
..+..+.+|++++. ++..++ ..+|+|||+||...+ ...+..++.+|+.|+.++++++...
T Consensus 57 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~ 130 (296)
T PRK05872 57 DRVLTVVADVTDLA------AMQAAAEEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPA 130 (296)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 35667779999754 243333 458999999997532 1234568899999999999998641
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
....+||++||.+.+.... ....|+.||+..+.++....
T Consensus 131 ~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~~~~~l~ 171 (296)
T PRK05872 131 LIERRGYVLQVSSLAAFAAAP---------------------------------------GMAAYCASKAGVEAFANALR 171 (296)
T ss_pred HHHcCCEEEEEeCHhhcCCCC---------------------------------------CchHHHHHHHHHHHHHHHHH
Confidence 1235899999987654211 12469999999999987654
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|+.++++.||.|..+..... ......+..+. +.+ +. ...-+++.++++++++.++..
T Consensus 172 ~e~~~~gi~v~~v~Pg~v~T~~~~~~-------~~~~~~~~~~~-~~~---~~---p~~~~~~~~~va~~i~~~~~~ 234 (296)
T PRK05872 172 LEVAHHGVTVGSAYLSWIDTDLVRDA-------DADLPAFRELR-ARL---PW---PLRRTTSVEKCAAAFVDGIER 234 (296)
T ss_pred HHHHHHCcEEEEEecCcccchhhhhc-------cccchhHHHHH-hhC---CC---cccCCCCHHHHHHHHHHHHhc
Confidence 689999999999865432110 00001111111 111 10 112467899999999988754
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.60 E-value=1.2e-06 Score=100.50 Aligned_cols=144 Identities=11% Similarity=0.152 Sum_probs=101.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCC---h------hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLR---F------DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~---~------~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++. ++..++. .+|+|||+||... + ...+...+.+|+.|+.+++.++.
T Consensus 420 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 493 (657)
T PRK07201 420 GTAHAYTCDLTDSA------AVDHTVKDILAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLL 493 (657)
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999754 3544443 5899999999642 1 12355688999999999877764
Q ss_pred hc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 341 RC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 341 ~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
.. .+..+||++||.++++... ....|+.||++.+.++.
T Consensus 494 ~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~ 534 (657)
T PRK07201 494 PHMRERRFGHVVNVSSIGVQTNAP---------------------------------------RFSAYVASKAALDAFSD 534 (657)
T ss_pred HhhhhcCCCEEEEECChhhcCCCC---------------------------------------CcchHHHHHHHHHHHHH
Confidence 31 3457999999998765311 12459999999999987
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++ .|+.+++++||.|..+...+. .. + ....++..+++|..|+.++..
T Consensus 535 ~la~e~~~~~i~v~~v~pg~v~T~~~~~~-------------------~~---~-----~~~~~~~~~~~a~~i~~~~~~ 587 (657)
T PRK07201 535 VAASETLSDGITFTTIHMPLVRTPMIAPT-------------------KR---Y-----NNVPTISPEEAADMVVRAIVE 587 (657)
T ss_pred HHHHHHHhhCCcEEEEECCcCcccccCcc-------------------cc---c-----cCCCCCCHHHHHHHHHHHHHh
Confidence 755 689999999999966432110 00 0 012357889999999887754
|
|
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=98.59 E-value=3.4e-06 Score=83.83 Aligned_cols=153 Identities=10% Similarity=0.001 Sum_probs=98.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHH-h
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLAT-R 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~-~ 341 (596)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+..++.+|+.|+.++++.+. .
T Consensus 48 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 121 (239)
T TIGR01831 48 GNARLLQFDVADRV------ACRTLLEADIAEHGAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMP 121 (239)
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999764 233333 357999999986431 23455688999999999988763 1
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.....+||++||.+.+.... ....|+.+|+..+.+++.
T Consensus 122 ~~~~~~~~~iv~vsS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 162 (239)
T TIGR01831 122 MIRARQGGRIITLASVSGVMGNR---------------------------------------GQVNYSAAKAGLIGATKA 162 (239)
T ss_pred HHhhcCCeEEEEEcchhhccCCC---------------------------------------CCcchHHHHHHHHHHHHH
Confidence 12446899999976432100 113599999988877766
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.|.++.... . ......+.. . ++ ..-+...++++++++.++...
T Consensus 163 la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~---~~~~~~~~~-~---~~-----~~~~~~~~~va~~~~~l~~~~ 223 (239)
T TIGR01831 163 LAVELAKRKITVNCIAPGLIDTEMLAE-------V---EHDLDEALK-T---VP-----MNRMGQPAEVASLAGFLMSDG 223 (239)
T ss_pred HHHHHhHhCeEEEEEEEccCccccchh-------h---hHHHHHHHh-c---CC-----CCCCCCHHHHHHHHHHHcCch
Confidence 54 68999999999996653210 0 111111111 1 11 112456689999999987643
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.9e-06 Score=85.54 Aligned_cols=148 Identities=14% Similarity=0.141 Sum_probs=98.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH-------hccccEEEEcCccCCh-----hhhHHHHHHHHHHHHHHHHHHHHhc-C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI-------QHHIHVIIHAAASLRF-----DELIQDAFTLNIQATRELLDLATRC-S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l-------~~~vd~ViH~AA~v~~-----~~~~~~~~~~NV~GT~~LL~~a~~~-~ 343 (596)
.+++++.+|++++.- +..+ ...+|+|||+|+.... ...+..++.+|+.+..++++.+..+ .
T Consensus 53 ~~~~~~~~Dl~~~~~------~~~~~~~~~~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~ 126 (238)
T PRK05786 53 GNIHYVVGDVSSTES------ARNVIEKAAKVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLK 126 (238)
T ss_pred CCeEEEECCCCCHHH------HHHHHHHHHHHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHh
Confidence 368899999997653 3333 2357999999985421 1233457889999999998888752 1
Q ss_pred CCceEEEecCcccc-cCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 344 QLKAILHVSTLYTH-SYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~-g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
...+||++||.... +... ....|+.+|++.+.++..++
T Consensus 127 ~~~~iv~~ss~~~~~~~~~---------------------------------------~~~~Y~~sK~~~~~~~~~~~~~ 167 (238)
T PRK05786 127 EGSSIVLVSSMSGIYKASP---------------------------------------DQLSYAVAKAGLAKAVEILASE 167 (238)
T ss_pred cCCEEEEEecchhcccCCC---------------------------------------CchHHHHHHHHHHHHHHHHHHH
Confidence 23579999987542 1100 12459999999988877655
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+|++++++||++|+++.. ++ .. +. . +. .....+++.++++.+++.++..
T Consensus 168 ~~~~gi~v~~i~pg~v~~~~~---~~---------~~-~~---~-~~------~~~~~~~~~~~va~~~~~~~~~ 219 (238)
T PRK05786 168 LLGRGIRVNGIAPTTISGDFE---PE---------RN-WK---K-LR------KLGDDMAPPEDFAKVIIWLLTD 219 (238)
T ss_pred HhhcCeEEEEEecCccCCCCC---ch---------hh-hh---h-hc------cccCCCCCHHHHHHHHHHHhcc
Confidence 589999999999988632 00 00 01 0 00 0112367889999999998854
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.58 E-value=1.8e-06 Score=90.58 Aligned_cols=150 Identities=11% Similarity=0.085 Sum_probs=97.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|+|||+|+...+. ..+...+++|+.|+.+++.++...
T Consensus 56 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~ 129 (330)
T PRK06139 56 AEVLVVPTDVTDAD------QVKALATQAASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPI 129 (330)
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 46888999999754 355444 4689999999964321 234557899999999988887531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+...||++||+..+.... +...|+.||+....+....
T Consensus 130 ~~~~~~g~iV~isS~~~~~~~p---------------------------------------~~~~Y~asKaal~~~~~sL 170 (330)
T PRK06139 130 FKKQGHGIFINMISLGGFAAQP---------------------------------------YAAAYSASKFGLRGFSEAL 170 (330)
T ss_pred HHHcCCCEEEEEcChhhcCCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 2346899999977543210 2246999999755555443
Q ss_pred ----h--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 ----L--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ----~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
. .|+.++++.||.|..+... +..++ .+. .......++..++||++++.++..
T Consensus 171 ~~El~~~~gI~V~~v~Pg~v~T~~~~----~~~~~-----------~~~------~~~~~~~~~~pe~vA~~il~~~~~ 228 (330)
T PRK06139 171 RGELADHPDIHVCDVYPAFMDTPGFR----HGANY-----------TGR------RLTPPPPVYDPRRVAKAVVRLADR 228 (330)
T ss_pred HHHhCCCCCeEEEEEecCCccCcccc----ccccc-----------ccc------cccCCCCCCCHHHHHHHHHHHHhC
Confidence 3 3799999999999665321 10000 000 001112357789999999888864
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=2.3e-06 Score=86.52 Aligned_cols=148 Identities=14% Similarity=0.134 Sum_probs=97.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++. .+..++ ..+|+|||+||...+. ..+...+.+|+.|+.++++++...
T Consensus 53 ~~~~~~~~D~~d~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~ 126 (263)
T PRK09072 53 GRHRWVVADLTSEA------GREAVLARAREMGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLL 126 (263)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHhcCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHH
Confidence 57899999999754 233333 4579999999976431 234567889999999999998641
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+...||++||...+.... ....|+.+|...+.++..++
T Consensus 127 ~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l~ 167 (263)
T PRK09072 127 RAQPSAMVVNVGSTFGSIGYP---------------------------------------GYASYCASKFALRGFSEALR 167 (263)
T ss_pred HhcCCCEEEEecChhhCcCCC---------------------------------------CccHHHHHHHHHHHHHHHHH
Confidence 2346789998865432100 12459999999887776655
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++.++++.||.+..+.... .. ... .. .....++.++++|++++.++..
T Consensus 168 ~~~~~~~i~v~~v~Pg~~~t~~~~~-----------------~~-~~~---~~--~~~~~~~~~~~va~~i~~~~~~ 221 (263)
T PRK09072 168 RELADTGVRVLYLAPRATRTAMNSE-----------------AV-QAL---NR--ALGNAMDDPEDVAAAVLQAIEK 221 (263)
T ss_pred HHhcccCcEEEEEecCcccccchhh-----------------hc-ccc---cc--cccCCCCCHHHHHHHHHHHHhC
Confidence 57889999998875432100 00 000 00 0012467889999999999864
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.57 E-value=1.8e-06 Score=85.73 Aligned_cols=152 Identities=13% Similarity=0.124 Sum_probs=97.6
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh---ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-cCCCc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ---HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR-CSQLK 346 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~---~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~-~~~vk 346 (596)
.+.++.+|+++.. .+..++ ..+|+|||+|+..... ..+...+.+|+.|+..++..+.. +....
T Consensus 52 ~~~~~~~D~~~~~------~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g 125 (237)
T PRK12742 52 GATAVQTDSADRD------AVIDVVRKSGALDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGG 125 (237)
T ss_pred CCeEEecCCCCHH------HHHHHHHHhCCCcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCC
Confidence 3567889988643 243333 3589999999875321 23456889999999999766654 22346
Q ss_pred eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----c
Q psy5825 347 AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----Y 421 (596)
Q Consensus 347 rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~ 421 (596)
+||++||...... +. . ....|+.+|++.+.+++.++ .
T Consensus 126 ~iv~isS~~~~~~---------~~----------------------------~-~~~~Y~~sKaa~~~~~~~la~~~~~~ 167 (237)
T PRK12742 126 RIIIIGSVNGDRM---------PV----------------------------A-GMAAYAASKSALQGMARGLARDFGPR 167 (237)
T ss_pred eEEEEeccccccC---------CC----------------------------C-CCcchHHhHHHHHHHHHHHHHHHhhh
Confidence 8999999764210 00 0 12469999999999997765 6
Q ss_pred CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 422 KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 422 gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
|+.+++++||.|..+... . ..+ + ........ + ..-+...++++++++.++..
T Consensus 168 gi~v~~v~Pg~~~t~~~~---~-----~~~--~-~~~~~~~~---~-----~~~~~~p~~~a~~~~~l~s~ 219 (237)
T PRK12742 168 GITINVVQPGPIDTDANP---A-----NGP--M-KDMMHSFM---A-----IKRHGRPEEVAGMVAWLAGP 219 (237)
T ss_pred CeEEEEEecCcccCCccc---c-----ccH--H-HHHHHhcC---C-----CCCCCCHHHHHHHHHHHcCc
Confidence 799999999999654321 0 111 1 11111111 1 11246788999999888754
|
|
| >smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=98.55 E-value=1e-06 Score=82.43 Aligned_cols=112 Identities=14% Similarity=0.140 Sum_probs=82.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++ ..+|+|||+|+..... ..+..++.+|+.|+.+|++++..
T Consensus 53 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~- 125 (180)
T smart00822 53 AEVTVVACDVADRA------ALAAALAAIPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRD- 125 (180)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhcc-
Confidence 46888999998643 244443 3469999999965321 23456789999999999999977
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-c
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-Y 421 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~ 421 (596)
.+..+||++||.+..-... ....|+.+|...+.++.... .
T Consensus 126 ~~~~~ii~~ss~~~~~~~~---------------------------------------~~~~y~~sk~~~~~~~~~~~~~ 166 (180)
T smart00822 126 LPLDFFVLFSSVAGVLGNP---------------------------------------GQANYAAANAFLDALAAHRRAR 166 (180)
T ss_pred CCcceEEEEccHHHhcCCC---------------------------------------CchhhHHHHHHHHHHHHHHHhc
Confidence 5678999999976432100 11459999999999997655 8
Q ss_pred CCCEEEecCCccc
Q psy5825 422 KLPLAMVRPSIVV 434 (596)
Q Consensus 422 gl~~~IlRp~~V~ 434 (596)
+++++++.||.+-
T Consensus 167 ~~~~~~~~~g~~~ 179 (180)
T smart00822 167 GLPATSINWGAWA 179 (180)
T ss_pred CCceEEEeecccc
Confidence 9999999988763
|
It uses NADPH to reduce the keto group to a hydroxy group. |
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=6.1e-06 Score=83.68 Aligned_cols=115 Identities=10% Similarity=0.064 Sum_probs=82.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++. ++..+++ .+|++||+||.... ...+...+.+|+.|...+++.+...
T Consensus 58 ~~~~~~~~Dv~~~~------~i~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m 131 (263)
T PRK08339 58 VDVSYIVADLTKRE------DLERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAM 131 (263)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 46889999999764 2444443 58999999996432 1335568899998877777666431
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..++|++||.+.+.... ....|+.+|..-+.+++..+
T Consensus 132 ~~~~~g~Ii~isS~~~~~~~~---------------------------------------~~~~y~asKaal~~l~~~la 172 (263)
T PRK08339 132 ERKGFGRIIYSTSVAIKEPIP---------------------------------------NIALSNVVRISMAGLVRTLA 172 (263)
T ss_pred HHcCCCEEEEEcCccccCCCC---------------------------------------cchhhHHHHHHHHHHHHHHH
Confidence 3456899999987543210 12359999999998887765
Q ss_pred -----cCCCEEEecCCccccC
Q psy5825 421 -----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~ 436 (596)
.|+.+.++.||.|..+
T Consensus 173 ~el~~~gIrVn~v~PG~v~T~ 193 (263)
T PRK08339 173 KELGPKGITVNGIMPGIIRTD 193 (263)
T ss_pred HHhcccCeEEEEEEeCcCccH
Confidence 6899999999998553
|
|
| >COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=98.53 E-value=4.5e-06 Score=84.52 Aligned_cols=178 Identities=16% Similarity=0.109 Sum_probs=126.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
..+.++.+|+.++.. +...+.+++.++++..... ... ......+.+..++.+.+. ..+.+++++|...+
T Consensus 42 ~~v~~~~~d~~~~~~------l~~a~~G~~~~~~i~~~~~-~~~--~~~~~~~~~~~~~a~~a~--~~~~~~~~~s~~~~ 110 (275)
T COG0702 42 GGVEVVLGDLRDPKS------LVAGAKGVDGVLLISGLLD-GSD--AFRAVQVTAVVRAAEAAG--AGVKHGVSLSVLGA 110 (275)
T ss_pred CCcEEEEeccCCHhH------HHHHhccccEEEEEecccc-ccc--chhHHHHHHHHHHHHHhc--CCceEEEEeccCCC
Confidence 468899999998876 8899999999999998765 333 344455555566666555 25788888888765
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
... .+..|..+|..+|+++... |++.+++|+..+|..
T Consensus 111 ~~~-----------------------------------------~~~~~~~~~~~~e~~l~~s--g~~~t~lr~~~~~~~ 147 (275)
T COG0702 111 DAA-----------------------------------------SPSALARAKAAVEAALRSS--GIPYTTLRRAAFYLG 147 (275)
T ss_pred CCC-----------------------------------------CccHHHHHHHHHHHHHHhc--CCCeEEEecCeeeec
Confidence 331 1246999999999999874 899999996666553
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPP 516 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (596)
.. .. ........+. +.++ .+...+.++.++|++.++..++..+. ..+.
T Consensus 148 ~~----------~~--~~~~~~~~~~-~~~~-~~~~~~~~i~~~d~a~~~~~~l~~~~------------------~~~~ 195 (275)
T COG0702 148 AG----------AA--FIEAAEAAGL-PVIP-RGIGRLSPIAVDDVAEALAAALDAPA------------------TAGR 195 (275)
T ss_pred cc----------hh--HHHHHHhhCC-ceec-CCCCceeeeEHHHHHHHHHHHhcCCc------------------ccCc
Confidence 11 00 0112222222 2222 23337899999999999988876543 2578
Q ss_pred eEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 517 VYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 517 vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+|.++++ ..+++.++...+....+
T Consensus 196 ~~~l~g~--~~~~~~~~~~~l~~~~g 219 (275)
T COG0702 196 TYELAGP--EALTLAELASGLDYTIG 219 (275)
T ss_pred EEEccCC--ceecHHHHHHHHHHHhC
Confidence 9999998 88999999999999888
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.53 E-value=9.5e-07 Score=88.93 Aligned_cols=153 Identities=9% Similarity=0.072 Sum_probs=95.8
Q ss_pred EEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh---------hhHHHHHHHHHHHHHHHHHHHHh-c
Q psy5825 280 HIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD---------ELIQDAFTLNIQATRELLDLATR-C 342 (596)
Q Consensus 280 ~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~---------~~~~~~~~~NV~GT~~LL~~a~~-~ 342 (596)
.++.+|++++. .+..+++ .+|+|||+|+..... ..+...+.+|+.|+.++++.+.. +
T Consensus 54 ~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l 127 (255)
T PRK06057 54 LFVPTDVTDED------AVNALFDTAAETYGSVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHM 127 (255)
T ss_pred cEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHH
Confidence 57889998754 3554443 579999999875321 12456889999999988887653 1
Q ss_pred --CCCceEEEecCcc-cccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH-
Q psy5825 343 --SQLKAILHVSTLY-THSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK- 418 (596)
Q Consensus 343 --~~vkrfV~vSS~~-v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~- 418 (596)
.+..+||++||.. ++|... ...+|+.+|++.+.++..
T Consensus 128 ~~~~~g~iv~~sS~~~~~g~~~---------------------------------------~~~~Y~~sKaal~~~~~~l 168 (255)
T PRK06057 128 VRQGKGSIINTASFVAVMGSAT---------------------------------------SQISYTASKGGVLAMSREL 168 (255)
T ss_pred HHhCCcEEEEEcchhhccCCCC---------------------------------------CCcchHHHHHHHHHHHHHH
Confidence 2346899999864 343200 124599999766666554
Q ss_pred ---Hh-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 ---YL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ---~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+. .|+.+++++||.|.++..... +. ..+... .. .+..++. ..+..+++++++++.++..
T Consensus 169 ~~~~~~~gi~v~~i~pg~v~t~~~~~~--~~---~~~~~~-~~----~~~~~~~-----~~~~~~~~~a~~~~~l~~~ 231 (255)
T PRK06057 169 GVQFARQGIRVNALCPGPVNTPLLQEL--FA---KDPERA-AR----RLVHVPM-----GRFAEPEEIAAAVAFLASD 231 (255)
T ss_pred HHHHHhhCcEEEEEeeCCcCCchhhhh--cc---CCHHHH-HH----HHhcCCC-----CCCcCHHHHHHHHHHHhCc
Confidence 33 689999999999987643211 00 011111 11 0111111 2578899999998877654
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=2.6e-06 Score=85.75 Aligned_cols=155 Identities=17% Similarity=0.184 Sum_probs=101.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|++||+|+.... ...+..++.+|+.|+..|++++...
T Consensus 55 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 128 (251)
T PRK12481 55 RKFHFITADLIQQK------DIDSIVSQAVEVMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQ 128 (251)
T ss_pred CeEEEEEeCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHH
Confidence 56889999999754 344444 358999999997532 1335568899999999998887641
Q ss_pred ---CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+ ..+||++||...+.... ....|+.||++.+.+++.
T Consensus 129 ~~~~~~~g~ii~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~l~~~ 169 (251)
T PRK12481 129 FVKQGNGGKIINIASMLSFQGGI---------------------------------------RVPSYTASKSAVMGLTRA 169 (251)
T ss_pred HHHcCCCCEEEEeCChhhcCCCC---------------------------------------CCcchHHHHHHHHHHHHH
Confidence 12 35899999987654211 113599999999999876
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .|+++.+++||.|-.+.... +.........+ .. .+|. -.+...+++|++++.++..
T Consensus 170 la~e~~~~girvn~v~PG~v~t~~~~~-------~~~~~~~~~~~-~~---~~p~-----~~~~~peeva~~~~~L~s~ 232 (251)
T PRK12481 170 LATELSQYNINVNAIAPGYMATDNTAA-------LRADTARNEAI-LE---RIPA-----SRWGTPDDLAGPAIFLSSS 232 (251)
T ss_pred HHHHHhhcCeEEEEEecCCCccCchhh-------cccChHHHHHH-Hh---cCCC-----CCCcCHHHHHHHHHHHhCc
Confidence 55 68999999999985542110 00001111111 11 1121 1256779999999988753
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.3e-06 Score=88.60 Aligned_cols=171 Identities=11% Similarity=0.025 Sum_probs=103.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH-------hccccEEEEcCccCChh------------------hhHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI-------QHHIHVIIHAAASLRFD------------------ELIQDAFTLNIQA 331 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l-------~~~vd~ViH~AA~v~~~------------------~~~~~~~~~NV~G 331 (596)
.++.++.+|++++.. + ...+..+ +..+|+|||+||..... ..+..++.+|+.|
T Consensus 52 ~~~~~~~~Dv~d~~~-~-~~~~~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~ 129 (267)
T TIGR02685 52 NSAVTCQADLSNSAT-L-FSRCEAIIDACFRAFGRCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIA 129 (267)
T ss_pred CceEEEEccCCCchh-h-HHHHHHHHHHHHHccCCceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHH
Confidence 457789999998752 0 0012222 24689999999964311 0244678999999
Q ss_pred HHHHHHHHHhcC---------CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCC
Q psy5825 332 TRELLDLATRCS---------QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYN 402 (596)
Q Consensus 332 T~~LL~~a~~~~---------~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~ 402 (596)
+..+++++...- ....+|++||....... . ..
T Consensus 130 ~~~l~~~~~~~~~~~~~~~~~~~~~iv~~~s~~~~~~~--------------------------------------~-~~ 170 (267)
T TIGR02685 130 PYFLIKAFAQRQAGTRAEQRSTNLSIVNLCDAMTDQPL--------------------------------------L-GF 170 (267)
T ss_pred HHHHHHHHHHHhhhcccccCCCCeEEEEehhhhccCCC--------------------------------------c-cc
Confidence 999998765411 11356666665432110 0 22
Q ss_pred chHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccc
Q psy5825 403 NSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLI 477 (596)
Q Consensus 403 ~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~i 477 (596)
..|+.||+..+.+++.++ .|+.+++++||.|..+... ...+...+.. . .+. ...+.
T Consensus 171 ~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~~~~~~~~-----------~~~~~~~~~~-~---~~~----~~~~~ 231 (267)
T TIGR02685 171 TMYTMAKHALEGLTRSAALELAPLQIRVNGVAPGLSLLPDAM-----------PFEVQEDYRR-K---VPL----GQREA 231 (267)
T ss_pred chhHHHHHHHHHHHHHHHHHHhhhCeEEEEEecCCccCcccc-----------chhHHHHHHH-h---CCC----CcCCC
Confidence 469999999999998765 6899999999998643210 0111111111 1 111 11246
Q ss_pred cHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 478 PVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 478 pVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..++++++++.++...... ..|.++++.++
T Consensus 232 ~~~~va~~~~~l~~~~~~~----------------~~G~~~~v~gg 261 (267)
T TIGR02685 232 SAEQIADVVIFLVSPKAKY----------------ITGTCIKVDGG 261 (267)
T ss_pred CHHHHHHHHHHHhCcccCC----------------cccceEEECCc
Confidence 7899999999987543221 35777777665
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.51 E-value=1.9e-06 Score=94.43 Aligned_cols=111 Identities=16% Similarity=0.194 Sum_probs=79.4
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc--
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC-- 342 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~-- 342 (596)
..++.+|++++.. +..+++ .+|+|||+|+.... ...+...+.+|+.|+.+|++++...
T Consensus 258 ~~~~~~Dv~~~~~------~~~~~~~~~~~~g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~ 331 (450)
T PRK08261 258 GTALALDITAPDA------PARIAEHLAERHGGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGA 331 (450)
T ss_pred CeEEEEeCCCHHH------HHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh
Confidence 4578899987542 333332 58999999997642 1335568899999999999998762
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....+||++||++.+.... ....|+.+|+..+.++..++
T Consensus 332 ~~~~g~iv~~SS~~~~~g~~---------------------------------------~~~~Y~asKaal~~~~~~la~ 372 (450)
T PRK08261 332 LGDGGRIVGVSSISGIAGNR---------------------------------------GQTNYAASKAGVIGLVQALAP 372 (450)
T ss_pred hcCCCEEEEECChhhcCCCC---------------------------------------CChHHHHHHHHHHHHHHHHHH
Confidence 1236899999986542100 11459999998777776654
Q ss_pred ----cCCCEEEecCCccc
Q psy5825 421 ----YKLPLAMVRPSIVV 434 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~ 434 (596)
.|+.++++.||.|-
T Consensus 373 el~~~gi~v~~v~PG~i~ 390 (450)
T PRK08261 373 LLAERGITINAVAPGFIE 390 (450)
T ss_pred HHhhhCcEEEEEEeCcCc
Confidence 68999999999874
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.50 E-value=2.3e-06 Score=82.82 Aligned_cols=140 Identities=13% Similarity=0.152 Sum_probs=93.0
Q ss_pred EEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-cCCCceEE
Q psy5825 281 IISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR-CSQLKAIL 349 (596)
Q Consensus 281 ~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~-~~~vkrfV 349 (596)
.+.+|++++. .+..+++ .+|+|||+||...+. ..+...+.+|+.|+.++++++.. +.....||
T Consensus 35 ~~~~D~~~~~------~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv 108 (199)
T PRK07578 35 DVQVDITDPA------SIRALFEKVGKVDAVVSAAGKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLNDGGSFT 108 (199)
T ss_pred ceEecCCChH------HHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCeEE
Confidence 4577888654 3555544 689999999964321 23445788999999999999865 22335799
Q ss_pred EecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----cCCCE
Q psy5825 350 HVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----YKLPL 425 (596)
Q Consensus 350 ~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----~gl~~ 425 (596)
++||........ ....|+.||+..+.++..++ .|+.+
T Consensus 109 ~iss~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~e~~~gi~v 149 (199)
T PRK07578 109 LTSGILSDEPIP---------------------------------------GGASAATVNGALEGFVKAAALELPRGIRI 149 (199)
T ss_pred EEcccccCCCCC---------------------------------------CchHHHHHHHHHHHHHHHHHHHccCCeEE
Confidence 999866432100 12469999999999887765 47888
Q ss_pred EEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 426 AMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 426 ~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+.||.|-.+. . .. + ..+++ ..+++.+++|++++.++..
T Consensus 150 ~~i~Pg~v~t~~---------------~---~~--~--~~~~~-----~~~~~~~~~a~~~~~~~~~ 189 (199)
T PRK07578 150 NVVSPTVLTESL---------------E---KY--G--PFFPG-----FEPVPAARVALAYVRSVEG 189 (199)
T ss_pred EEEcCCcccCch---------------h---hh--h--hcCCC-----CCCCCHHHHHHHHHHHhcc
Confidence 888888773211 0 00 0 01121 2468999999999888753
|
|
| >PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.8e-07 Score=91.22 Aligned_cols=134 Identities=15% Similarity=0.155 Sum_probs=86.0
Q ss_pred EEEeccCCCCCCCCHHHHHHHhc----cccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEecCcc
Q psy5825 281 IISGDISQPSLGISSHDQQFIQH----HIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRC-SQLKAILHVSTLY 355 (596)
Q Consensus 281 ~v~GDl~~~~lGL~~~~~~~l~~----~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~ 355 (596)
++.+|+++.. ++..+++ ++|+|||+||... ..++...+.+|+.|+..|++++... ....+||++||.+
T Consensus 27 ~~~~Dl~~~~------~v~~~~~~~~~~iD~li~nAG~~~-~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~Iv~isS~~ 99 (241)
T PRK12428 27 FIQADLGDPA------SIDAAVAALPGRIDALFNIAGVPG-TAPVELVARVNFLGLRHLTEALLPRMAPGGAIVNVASLA 99 (241)
T ss_pred hhcccCCCHH------HHHHHHHHhcCCCeEEEECCCCCC-CCCHHHhhhhchHHHHHHHHHHHHhccCCcEEEEeCcHH
Confidence 4578888543 3555554 5899999999764 3457778999999999999999752 2236999999999
Q ss_pred cccCCcc--ccccccCCCCChHHHHHHHhcCChHHHHhh--hhhhcCCCCCchHHHHHHHHHHHHHHHh------cCCCE
Q psy5825 356 THSYRED--IQEEFYPPLFSYEDLAHVMQTTNQEELEIL--SSMLFGGIYNNSYSFTKAIGESVVEKYL------YKLPL 425 (596)
Q Consensus 356 v~g~~~~--i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~--~p~~~~~~~~~~Y~~SK~~aE~lv~~~~------~gl~~ 425 (596)
.++.... +.+.... ..+ ++ ..+... .| .. ....|+.||++.+.+.+..+ .|+.+
T Consensus 100 ~~~~~~~~~~~~~~~~-~~~----------~~-~~~~~~~~~~---~~-~~~~Y~~sK~a~~~~~~~la~~e~~~~girv 163 (241)
T PRK12428 100 GAEWPQRLELHKALAA-TAS----------FD-EGAAWLAAHP---VA-LATGYQLSKEALILWTMRQAQPWFGARGIRV 163 (241)
T ss_pred hhccccchHHHHhhhc-cch----------HH-HHHHhhhccC---CC-cccHHHHHHHHHHHHHHHHHHHhhhccCeEE
Confidence 8763210 0000000 000 00 000000 01 01 22679999999998875432 68999
Q ss_pred EEecCCccccCC
Q psy5825 426 AMVRPSIVVSTW 437 (596)
Q Consensus 426 ~IlRp~~V~G~~ 437 (596)
++++||.|.++.
T Consensus 164 n~v~PG~v~T~~ 175 (241)
T PRK12428 164 NCVAPGPVFTPI 175 (241)
T ss_pred EEeecCCccCcc
Confidence 999999998764
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=98.49 E-value=3.4e-06 Score=85.04 Aligned_cols=115 Identities=14% Similarity=0.147 Sum_probs=80.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc-----------ccEEEEcCccCCh----------hhhHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH-----------IHVIIHAAASLRF----------DELIQDAFTLNIQATREL 335 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~-----------vd~ViH~AA~v~~----------~~~~~~~~~~NV~GT~~L 335 (596)
.++.++.+|++++. ++..+++. .|+|||+||.... ...+..++++|+.|+..+
T Consensus 55 ~~v~~~~~Dl~~~~------~v~~~~~~~~~~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~ 128 (256)
T TIGR01500 55 LRVVRVSLDLGAEA------GLEQLLKALRELPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCL 128 (256)
T ss_pred ceEEEEEeccCCHH------HHHHHHHHHHhccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHH
Confidence 46889999999754 24444322 2589999996421 123456889999999888
Q ss_pred HHHHHhc----CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHH
Q psy5825 336 LDLATRC----SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKA 410 (596)
Q Consensus 336 L~~a~~~----~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~ 410 (596)
++++... .+ ..+||++||.+.+.... ....|+.||+
T Consensus 129 ~~~~~~~l~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKa 169 (256)
T TIGR01500 129 TSSVLKAFKDSPGLNRTVVNISSLCAIQPFK---------------------------------------GWALYCAGKA 169 (256)
T ss_pred HHHHHHHHhhcCCCCCEEEEECCHHhCCCCC---------------------------------------CchHHHHHHH
Confidence 8877542 11 25799999986543110 1246999999
Q ss_pred HHHHHHHHHh-----cCCCEEEecCCccccC
Q psy5825 411 IGESVVEKYL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 411 ~aE~lv~~~~-----~gl~~~IlRp~~V~G~ 436 (596)
..+.+++.++ .|+.++.+.||.|-.+
T Consensus 170 al~~l~~~la~e~~~~~i~v~~v~PG~v~T~ 200 (256)
T TIGR01500 170 ARDMLFQVLALEEKNPNVRVLNYAPGVLDTD 200 (256)
T ss_pred HHHHHHHHHHHHhcCCCeEEEEecCCcccch
Confidence 9999988765 6789999999988543
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.48 E-value=4.5e-06 Score=84.38 Aligned_cols=155 Identities=12% Similarity=0.067 Sum_probs=100.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++ ..+|+|||+|+.... ...+...+.+|+.|+..+++++...
T Consensus 69 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 142 (262)
T PRK07831 69 GRVEAVVCDVTSEA------QVDALIDAAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRY 142 (262)
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 36889999999754 244443 357999999996421 1234567889999999998887641
Q ss_pred ---CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.. ...||++||...+.... ....|+.||++.+.++..
T Consensus 143 ~~~~~~~g~iv~~ss~~~~~~~~---------------------------------------~~~~Y~~sKaal~~~~~~ 183 (262)
T PRK07831 143 MRARGHGGVIVNNASVLGWRAQH---------------------------------------GQAHYAAAKAGVMALTRC 183 (262)
T ss_pred HHhcCCCcEEEEeCchhhcCCCC---------------------------------------CCcchHHHHHHHHHHHHH
Confidence 12 35788888865332100 124599999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.+..+... .. ....++..+.. .. + ..-+...+|++++++.++...
T Consensus 184 la~e~~~~gI~v~~i~Pg~~~t~~~~-------~~-~~~~~~~~~~~-~~---~-----~~r~~~p~~va~~~~~l~s~~ 246 (262)
T PRK07831 184 SALEAAEYGVRINAVAPSIAMHPFLA-------KV-TSAELLDELAA-RE---A-----FGRAAEPWEVANVIAFLASDY 246 (262)
T ss_pred HHHHhCccCeEEEEEeeCCccCcccc-------cc-cCHHHHHHHHh-cC---C-----CCCCcCHHHHHHHHHHHcCch
Confidence 66 6899999999999775321 00 11222222211 11 1 123567789999999987543
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.46 E-value=8.9e-07 Score=89.10 Aligned_cols=156 Identities=13% Similarity=0.132 Sum_probs=101.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+++.. ++..+++ .+|+||||||...+. ..+...+.+|+.|+.+|++++...
T Consensus 57 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 130 (253)
T PRK08993 57 RRFLSLTADLRKID------GIPALLERAVAEFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKH 130 (253)
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 46888999998643 3444443 589999999975421 245668899999999999987641
Q ss_pred ---C-CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---S-QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~-~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .-.+||++||...+.... ....|+.||++.+.+++.
T Consensus 131 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~ 171 (253)
T PRK08993 131 FIAQGNGGKIINIASMLSFQGGI---------------------------------------RVPSYTASKSGVMGVTRL 171 (253)
T ss_pred HHhCCCCeEEEEECchhhccCCC---------------------------------------CCcchHHHHHHHHHHHHH
Confidence 1 125799999987654211 113599999999988877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.+++++||.|-.+.... +.........+ .. .++. .-|...+++|.+++.++...
T Consensus 172 la~e~~~~gi~v~~v~pG~v~T~~~~~-------~~~~~~~~~~~-~~---~~p~-----~r~~~p~eva~~~~~l~s~~ 235 (253)
T PRK08993 172 MANEWAKHNINVNAIAPGYMATNNTQQ-------LRADEQRSAEI-LD---RIPA-----GRWGLPSDLMGPVVFLASSA 235 (253)
T ss_pred HHHHhhhhCeEEEEEeeCcccCcchhh-------hccchHHHHHH-Hh---cCCC-----CCCcCHHHHHHHHHHHhCcc
Confidence 65 58999999999995542210 00000111111 11 1111 12566799999999888543
|
|
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.45 E-value=6.3e-06 Score=83.11 Aligned_cols=114 Identities=16% Similarity=0.161 Sum_probs=80.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++ ..+|+|||+|+..... ..+...+++|+.|...+...+..
T Consensus 68 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 141 (256)
T PRK12859 68 VKVSSMELDLTQND------APKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARG 141 (256)
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999754 233333 3479999999975321 12445789999999988655532
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
+ ....+||++||........ ....|+.||++.+.++..+
T Consensus 142 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~l~~~l 182 (256)
T PRK12859 142 FDKKSGGRIINMTSGQFQGPMV---------------------------------------GELAYAATKGAIDALTSSL 182 (256)
T ss_pred HhhcCCeEEEEEcccccCCCCC---------------------------------------CchHHHHHHHHHHHHHHHH
Confidence 1 2345999999986543100 1246999999999998776
Q ss_pred h-----cCCCEEEecCCcccc
Q psy5825 420 L-----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G 435 (596)
+ .|+.++.++||.|-.
T Consensus 183 a~~~~~~~i~v~~v~PG~i~t 203 (256)
T PRK12859 183 AAEVAHLGITVNAINPGPTDT 203 (256)
T ss_pred HHHhhhhCeEEEEEEEccccC
Confidence 5 679999999998844
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.4e-06 Score=87.08 Aligned_cols=150 Identities=11% Similarity=0.110 Sum_probs=96.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++. .+|+|||+||...+. ..+..++++|+.|+.++++++...
T Consensus 62 ~~~~~~~~D~~~~~------~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 135 (273)
T PRK08278 62 GQALPLVGDVRDED------QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH 135 (273)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 56889999999764 2444433 689999999975321 224557889999999999999742
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+-.++|++||....... +. . ....|+.||++.|.+++.+
T Consensus 136 ~~~~~~g~iv~iss~~~~~~~-------~~-----------------------------~-~~~~Y~~sK~a~~~~~~~l 178 (273)
T PRK08278 136 LKKSENPHILTLSPPLNLDPK-------WF-----------------------------A-PHTAYTMAKYGMSLCTLGL 178 (273)
T ss_pred HHhcCCCEEEEECCchhcccc-------cc-----------------------------C-CcchhHHHHHHHHHHHHHH
Confidence 223578888875321100 00 0 2246999999999999887
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+ .++.++.+.||.++.. .+...+..+ ......+...+++|++++.++...
T Consensus 179 a~el~~~~I~v~~i~Pg~~i~t----------------~~~~~~~~~--------~~~~~~~~~p~~va~~~~~l~~~~ 233 (273)
T PRK08278 179 AEEFRDDGIAVNALWPRTTIAT----------------AAVRNLLGG--------DEAMRRSRTPEIMADAAYEILSRP 233 (273)
T ss_pred HHHhhhcCcEEEEEeCCCcccc----------------HHHHhcccc--------cccccccCCHHHHHHHHHHHhcCc
Confidence 6 5789999998843211 000000000 011123577899999999987543
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.44 E-value=4.5e-06 Score=86.98 Aligned_cols=127 Identities=13% Similarity=0.087 Sum_probs=83.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh------hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD------ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~------~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+||+++. .+..++ ..+|+|||+||..... ..++..+.+|+.|...|+.++...
T Consensus 65 ~~v~~~~~Dl~d~~------sv~~~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l 138 (313)
T PRK05854 65 AKLSLRALDLSSLA------SVAALGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLL 138 (313)
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHH
Confidence 36889999999754 244333 3489999999975421 235668899999988888777631
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+..+||++||.+.+....... .++ .. .+ . . ....|+.||++...+...++
T Consensus 139 ~~~~~riv~vsS~~~~~~~~~~~------~~~------------~~-----~~-~--~-~~~~Y~~SK~a~~~~~~~la~ 191 (313)
T PRK05854 139 RAGRARVTSQSSIAARRGAINWD------DLN------------WE-----RS-Y--A-GMRAYSQSKIAVGLFALELDR 191 (313)
T ss_pred HhCCCCeEEEechhhcCCCcCcc------ccc------------cc-----cc-C--c-chhhhHHHHHHHHHHHHHHHH
Confidence 1245899999986543211000 000 00 00 0 0 12469999999999887664
Q ss_pred ------cCCCEEEecCCccccC
Q psy5825 421 ------YKLPLAMVRPSIVVST 436 (596)
Q Consensus 421 ------~gl~~~IlRp~~V~G~ 436 (596)
.|+.++.+.||.|..+
T Consensus 192 ~~~~~~~gI~v~~v~PG~v~T~ 213 (313)
T PRK05854 192 RSRAAGWGITSNLAHPGVAPTN 213 (313)
T ss_pred HhhcCCCCeEEEEEecceeccC
Confidence 3689999999998654
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.44 E-value=2.2e-06 Score=96.65 Aligned_cols=115 Identities=14% Similarity=0.059 Sum_probs=84.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.- +..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 364 ~~~~~~~~Dv~~~~~------~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~ 437 (582)
T PRK05855 364 AVAHAYRVDVSDADA------MEAFAEWVRAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQ 437 (582)
T ss_pred CeEEEEEcCCCCHHH------HHHHHHHHHHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 367899999997652 444443 48999999998542 1234567889999999999886531
Q ss_pred ---CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+ ..+||++||++++.... ....|+.||++.+.++..
T Consensus 438 ~~~~~~~g~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~ 478 (582)
T PRK05855 438 MVERGTGGHIVNVASAAAYAPSR---------------------------------------SLPAYATSKAAVLMLSEC 478 (582)
T ss_pred HHhcCCCcEEEEECChhhccCCC---------------------------------------CCcHHHHHHHHHHHHHHH
Confidence 12 35899999998765311 124699999998888766
Q ss_pred Hh-----cCCCEEEecCCccccC
Q psy5825 419 YL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~ 436 (596)
.+ .|+.++++.||.|-.+
T Consensus 479 l~~e~~~~gi~v~~v~Pg~v~t~ 501 (582)
T PRK05855 479 LRAELAAAGIGVTAICPGFVDTN 501 (582)
T ss_pred HHHHhcccCcEEEEEEeCCCccc
Confidence 54 6899999999998554
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=4.3e-06 Score=83.24 Aligned_cols=146 Identities=12% Similarity=0.080 Sum_probs=95.0
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHH-------h-ccccEEEEcCccCC----hh----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFI-------Q-HHIHVIIHAAASLR----FD----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l-------~-~~vd~ViH~AA~v~----~~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.+.++.+|+++... ..+..+ + ..+|+|||+||... +. ..+...+.+|+.|+.+|++++..
T Consensus 57 ~~~~~~~D~~~~~~----~~~~~~~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 132 (239)
T PRK08703 57 EPFAIRFDLMSAEE----KEFEQFAATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFP 132 (239)
T ss_pred CcceEEeeecccch----HHHHHHHHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 46678899975321 112222 2 46799999999642 11 23445789999999999888854
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||....... . ...+|+.||++.+.++..
T Consensus 133 ~~~~~~~~~iv~~ss~~~~~~~--------------------------------------~-~~~~Y~~sKaa~~~~~~~ 173 (239)
T PRK08703 133 LLKQSPDASVIFVGESHGETPK--------------------------------------A-YWGGFGASKAALNYLCKV 173 (239)
T ss_pred HHHhCCCCEEEEEeccccccCC--------------------------------------C-CccchHHhHHHHHHHHHH
Confidence 1 234689999885432110 0 124699999999999877
Q ss_pred Hh-----c-CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----Y-KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~-gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ . ++.+++++||.|+++.... + .++ .....+...++++.+++.++..
T Consensus 174 la~e~~~~~~i~v~~v~pG~v~t~~~~~---~---------------------~~~--~~~~~~~~~~~~~~~~~~~~~~ 227 (239)
T PRK08703 174 AADEWERFGNLRANVLVPGPINSPQRIK---S---------------------HPG--EAKSERKSYGDVLPAFVWWASA 227 (239)
T ss_pred HHHHhccCCCeEEEEEecCcccCccccc---c---------------------CCC--CCccccCCHHHHHHHHHHHhCc
Confidence 66 2 6899999999998863210 0 011 0111356788888888888753
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.43 E-value=1.5e-06 Score=88.09 Aligned_cols=113 Identities=16% Similarity=0.171 Sum_probs=82.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh----------------hhhHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF----------------DELIQDAFTLNIQATR 333 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~----------------~~~~~~~~~~NV~GT~ 333 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+..++.+|+.|+.
T Consensus 49 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~ 122 (266)
T PRK06171 49 ENYQFVPTDVSSAE------EVNHTVAEIIEKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVF 122 (266)
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHH
Confidence 36788899998754 2444433 57999999996421 1223557899999999
Q ss_pred HHHHHHHhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHH
Q psy5825 334 ELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKA 410 (596)
Q Consensus 334 ~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~ 410 (596)
.+++++... .+..+||++||...+.... ....|+.||+
T Consensus 123 ~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~ 163 (266)
T PRK06171 123 LMSQAVARQMVKQHDGVIVNMSSEAGLEGSE---------------------------------------GQSCYAATKA 163 (266)
T ss_pred HHHHHHHHHHHhcCCcEEEEEccccccCCCC---------------------------------------CCchhHHHHH
Confidence 999998742 2335799999987543210 1246999999
Q ss_pred HHHHHHHHHh-----cCCCEEEecCCccc
Q psy5825 411 IGESVVEKYL-----YKLPLAMVRPSIVV 434 (596)
Q Consensus 411 ~aE~lv~~~~-----~gl~~~IlRp~~V~ 434 (596)
..+.+++.++ .|+.+++++||.|.
T Consensus 164 a~~~l~~~la~e~~~~gi~v~~v~pG~~~ 192 (266)
T PRK06171 164 ALNSFTRSWAKELGKHNIRVVGVAPGILE 192 (266)
T ss_pred HHHHHHHHHHHHhhhcCeEEEEEeccccc
Confidence 9999987765 68999999999884
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.42 E-value=5.8e-06 Score=83.51 Aligned_cols=170 Identities=13% Similarity=-0.001 Sum_probs=104.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC---------h----hhhHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR---------F----DELIQDAFTLNIQATRELL 336 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~---------~----~~~~~~~~~~NV~GT~~LL 336 (596)
.++.++.+|++++. ++..++ ..+|+|||+|+... + ...+...+.+|+.+...++
T Consensus 59 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~ 132 (260)
T PRK08416 59 IKAKAYPLNILEPE------TYKELFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGA 132 (260)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHH
Confidence 47889999999754 244333 35799999997531 1 1223457788988877766
Q ss_pred HHHHhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHH
Q psy5825 337 DLATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413 (596)
Q Consensus 337 ~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE 413 (596)
..+... .+..+||++||........ ...+|+.||++.+
T Consensus 133 ~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~ 173 (260)
T PRK08416 133 QEAAKRMEKVGGGSIISLSSTGNLVYIE---------------------------------------NYAGHGTSKAAVE 173 (260)
T ss_pred HHHHHhhhccCCEEEEEEeccccccCCC---------------------------------------CcccchhhHHHHH
Confidence 665431 2345899999975432100 1246999999999
Q ss_pred HHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHH
Q psy5825 414 SVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLG 488 (596)
Q Consensus 414 ~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~ 488 (596)
.+++.++ .|+.++.+.||.|-.+... .+.....+...+.. . .+ .--+...+|+|.+++.
T Consensus 174 ~~~~~la~el~~~gi~v~~v~PG~i~T~~~~-------~~~~~~~~~~~~~~-~---~~-----~~r~~~p~~va~~~~~ 237 (260)
T PRK08416 174 TMVKYAATELGEKNIRVNAVSGGPIDTDALK-------AFTNYEEVKAKTEE-L---SP-----LNRMGQPEDLAGACLF 237 (260)
T ss_pred HHHHHHHHHhhhhCeEEEEEeeCcccChhhh-------hccCCHHHHHHHHh-c---CC-----CCCCCCHHHHHHHHHH
Confidence 9998866 5899999999988443211 01111111111111 0 11 1125678999999998
Q ss_pred HHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 489 VVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++...... ..|.++.+.++
T Consensus 238 l~~~~~~~----------------~~G~~i~vdgg 256 (260)
T PRK08416 238 LCSEKASW----------------LTGQTIVVDGG 256 (260)
T ss_pred HcChhhhc----------------ccCcEEEEcCC
Confidence 87543221 35777777665
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.41 E-value=1.2e-05 Score=81.26 Aligned_cols=115 Identities=13% Similarity=0.072 Sum_probs=79.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++ ..+|+|||+|+..... ..+...+.+|+.|...+++.+...
T Consensus 59 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 132 (265)
T PRK07062 59 ARLLAARCDVLDEA------DVAAFAAAVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPL 132 (265)
T ss_pred ceEEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 36888999999754 243333 3579999999974321 234567888998888777766431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.+|+..+.++...
T Consensus 133 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~y~asKaal~~~~~~l 173 (265)
T PRK07062 133 LRASAAASIVCVNSLLALQPEP---------------------------------------HMVATSAARAGLLNLVKSL 173 (265)
T ss_pred HhccCCcEEEEeccccccCCCC---------------------------------------CchHhHHHHHHHHHHHHHH
Confidence 2346899999987543210 1135999999887777654
Q ss_pred h-----cCCCEEEecCCccccC
Q psy5825 420 L-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~ 436 (596)
+ .|+.++++.||.|..+
T Consensus 174 a~e~~~~gi~v~~i~PG~v~t~ 195 (265)
T PRK07062 174 ATELAPKGVRVNSILLGLVESG 195 (265)
T ss_pred HHHhhhcCeEEEEEecCccccc
Confidence 4 6899999999998554
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.9e-05 Score=79.85 Aligned_cols=154 Identities=14% Similarity=0.053 Sum_probs=97.2
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~a 339 (596)
.+.++.+|++++. ++..++ ..+|++||+|+.... ...+...+++|+.|+..+++++
T Consensus 61 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~ 134 (258)
T PRK07533 61 APIFLPLDVREPG------QLEAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLA 134 (258)
T ss_pred cceEEecCcCCHH------HHHHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 3567889999764 233332 358999999986431 1234568899999999999988
Q ss_pred Hh-cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 340 TR-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 340 ~~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.. +..-.++|++||.+..... + ....|+.||++.+.+.+.
T Consensus 135 ~p~m~~~g~Ii~iss~~~~~~~--------~-------------------------------~~~~Y~asKaal~~l~~~ 175 (258)
T PRK07533 135 EPLMTNGGSLLTMSYYGAEKVV--------E-------------------------------NYNLMGPVKAALESSVRY 175 (258)
T ss_pred HHHhccCCEEEEEeccccccCC--------c-------------------------------cchhhHHHHHHHHHHHHH
Confidence 65 2222478999886532110 0 124599999999888877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.+ .|+.+..+.||.|-.+... ++ .....+...+.. ..+ ...+...+|+|.+++.++..
T Consensus 176 la~el~~~gI~Vn~v~PG~v~T~~~~---~~----~~~~~~~~~~~~----~~p-----~~r~~~p~dva~~~~~L~s~ 238 (258)
T PRK07533 176 LAAELGPKGIRVHAISPGPLKTRAAS---GI----DDFDALLEDAAE----RAP-----LRRLVDIDDVGAVAAFLASD 238 (258)
T ss_pred HHHHhhhcCcEEEEEecCCcCChhhh---cc----CCcHHHHHHHHh----cCC-----cCCCCCHHHHHHHHHHHhCh
Confidence 55 6899999999988554211 10 111111111111 111 11356779999999988754
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=98.40 E-value=1.2e-05 Score=81.31 Aligned_cols=114 Identities=15% Similarity=0.126 Sum_probs=81.0
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC-------hh----hhHHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR-------FD----ELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~-------~~----~~~~~~~~~NV~GT~~LL~~a 339 (596)
.+.++.+|++++.- +..++ ..+|++||+|+... +. ..+...+.+|+.|+..+++++
T Consensus 60 ~~~~~~~Dl~d~~~------v~~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~ 133 (258)
T PRK07370 60 PSLFLPCDVQDDAQ------IEETFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAA 133 (258)
T ss_pred cceEeecCcCCHHH------HHHHHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHH
Confidence 46788999997652 43333 35899999999642 11 224557889999999999887
Q ss_pred Hh-cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 340 TR-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 340 ~~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.. +..-.+||++||....... + ....|+.||++.+.+.+.
T Consensus 134 ~~~m~~~g~Iv~isS~~~~~~~--------~-------------------------------~~~~Y~asKaal~~l~~~ 174 (258)
T PRK07370 134 KPLMSEGGSIVTLTYLGGVRAI--------P-------------------------------NYNVMGVAKAALEASVRY 174 (258)
T ss_pred HHHHhhCCeEEEEeccccccCC--------c-------------------------------ccchhhHHHHHHHHHHHH
Confidence 64 2222589999996542110 0 124699999999999887
Q ss_pred Hh-----cCCCEEEecCCccccC
Q psy5825 419 YL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~ 436 (596)
.+ .|+.++++.||.|-.+
T Consensus 175 la~el~~~gI~Vn~i~PG~v~T~ 197 (258)
T PRK07370 175 LAAELGPKNIRVNAISAGPIRTL 197 (258)
T ss_pred HHHHhCcCCeEEEEEecCcccCc
Confidence 65 6799999999998554
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.39 E-value=1.2e-05 Score=81.20 Aligned_cols=155 Identities=12% Similarity=0.049 Sum_probs=95.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh---h----hhHHHHHHHHHHHHHHHHHHH---
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF---D----ELIQDAFTLNIQATRELLDLA--- 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~---~----~~~~~~~~~NV~GT~~LL~~a--- 339 (596)
.++.++.+|+++.. .+..++ ..+|+|||+|+.... . ..+...+.+|+.|+..++..+
T Consensus 57 ~~~~~~~~Dl~~~~------~i~~~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~ 130 (261)
T PRK08936 57 GEAIAVKGDVTVES------DVVNLIQTAVKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKY 130 (261)
T ss_pred CeEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788999999754 244433 357999999997432 1 234457899998887666554
Q ss_pred -HhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 340 -TRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 340 -~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.......+||++||...+.... ....|+.+|++.+.++..
T Consensus 131 ~~~~~~~g~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~ 171 (261)
T PRK08936 131 FVEHDIKGNIINMSSVHEQIPWP---------------------------------------LFVHYAASKGGVKLMTET 171 (261)
T ss_pred HHhcCCCcEEEEEccccccCCCC---------------------------------------CCcccHHHHHHHHHHHHH
Confidence 3312236899999975432100 224699999777766665
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.+ .|+.+++++||.|..+.... .+..+ .....+ ... .+ ..-+...++++++++.++..
T Consensus 172 la~e~~~~gi~v~~v~pg~v~t~~~~~------~~~~~-~~~~~~-~~~---~~-----~~~~~~~~~va~~~~~l~s~ 234 (261)
T PRK08936 172 LAMEYAPKGIRVNNIGPGAINTPINAE------KFADP-KQRADV-ESM---IP-----MGYIGKPEEIAAVAAWLASS 234 (261)
T ss_pred HHHHHhhcCeEEEEEEECcCCCCcccc------ccCCH-HHHHHH-Hhc---CC-----CCCCcCHHHHHHHHHHHcCc
Confidence 43 68999999999997653210 01111 111111 111 11 12356678999998888754
|
|
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.3e-06 Score=87.17 Aligned_cols=115 Identities=18% Similarity=0.149 Sum_probs=82.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-----------ccccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-----------HHIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-----------~~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~ 337 (596)
.++.++.+|+++... +..++ ..+|+|||+|+..... ..+...+.+|+.|+..+++
T Consensus 45 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 118 (243)
T PRK07023 45 ERLAEVELDLSDAAA------AAAWLAGDLLAAFVDGASRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTA 118 (243)
T ss_pred CeEEEEEeccCCHHH------HHHHHHHHHHHHhccCCCceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHH
Confidence 468899999997652 33321 1478999999975421 2345678899999887777
Q ss_pred HHHhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHH
Q psy5825 338 LATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGES 414 (596)
Q Consensus 338 ~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~ 414 (596)
.+... .+..+||++||...+.... ....|+.+|...|.
T Consensus 119 ~~~~~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~ 159 (243)
T PRK07023 119 ALAQAASDAAERRILHISSGAARNAYA---------------------------------------GWSVYCATKAALDH 159 (243)
T ss_pred HHHHHhhccCCCEEEEEeChhhcCCCC---------------------------------------CchHHHHHHHHHHH
Confidence 66541 2456999999987654210 12469999999999
Q ss_pred HHHHHh----cCCCEEEecCCccccC
Q psy5825 415 VVEKYL----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 415 lv~~~~----~gl~~~IlRp~~V~G~ 436 (596)
++..++ .++.+++++||.+-.+
T Consensus 160 ~~~~~~~~~~~~i~v~~v~pg~~~t~ 185 (243)
T PRK07023 160 HARAVALDANRALRIVSLAPGVVDTG 185 (243)
T ss_pred HHHHHHhcCCCCcEEEEecCCccccH
Confidence 998776 4899999999988443
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.38 E-value=1.2e-05 Score=80.83 Aligned_cols=155 Identities=12% Similarity=0.000 Sum_probs=99.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+|++++.- +..++ ..+|++||+|+.... ...+...+.+|+.|+..|+.+
T Consensus 55 ~~~~~~~~Dl~~~~~------v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~ 128 (252)
T PRK06079 55 EEDLLVECDVASDES------IERAFATIKERVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKY 128 (252)
T ss_pred CceeEEeCCCCCHHH------HHHHHHHHHHHhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHH
Confidence 457889999997542 33332 458999999997531 123455788999999999988
Q ss_pred HHh-cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 339 ATR-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 339 a~~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
+.. +....++|++||.+...... ....|+.||+.-+.+++
T Consensus 129 ~~~~~~~~g~Iv~iss~~~~~~~~---------------------------------------~~~~Y~asKaal~~l~~ 169 (252)
T PRK06079 129 ARPLLNPGASIVTLTYFGSERAIP---------------------------------------NYNVMGIAKAALESSVR 169 (252)
T ss_pred HHHhcccCceEEEEeccCccccCC---------------------------------------cchhhHHHHHHHHHHHH
Confidence 865 22235899999865422100 12469999999999997
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+ .|+.++++.||.|-.+... .+.....+...+ ... .|. --+...+|+|++++.++..
T Consensus 170 ~la~el~~~gI~vn~i~PG~v~T~~~~-------~~~~~~~~~~~~-~~~---~p~-----~r~~~pedva~~~~~l~s~ 233 (252)
T PRK06079 170 YLARDLGKKGIRVNAISAGAVKTLAVT-------GIKGHKDLLKES-DSR---TVD-----GVGVTIEEVGNTAAFLLSD 233 (252)
T ss_pred HHHHHhhhcCcEEEEEecCcccccccc-------cCCChHHHHHHH-Hhc---Ccc-----cCCCCHHHHHHHHHHHhCc
Confidence 765 6899999999999554211 111111221111 111 111 1366779999999988754
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.37 E-value=5.4e-06 Score=84.34 Aligned_cols=156 Identities=13% Similarity=0.077 Sum_probs=96.7
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh---
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR--- 341 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~--- 341 (596)
+.++.+|++++.. +..++ ..+|+|||+||...+ ...+...+.+|+.|+.+|++++..
T Consensus 52 ~~~~~~D~~~~~~------~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~ 125 (272)
T PRK07832 52 PEHRALDISDYDA------VAAFAADIHAAHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMV 125 (272)
T ss_pred ceEEEeeCCCHHH------HHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 5667899997542 33333 347999999986432 123456889999999999999753
Q ss_pred -cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 -CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 -~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.....+||++||...+.... ....|+.||++.+.++....
T Consensus 126 ~~~~~g~ii~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l~ 166 (272)
T PRK07832 126 AAGRGGHLVNVSSAAGLVALP---------------------------------------WHAAYSASKFGLRGLSEVLR 166 (272)
T ss_pred hCCCCcEEEEEccccccCCCC---------------------------------------CCcchHHHHHHHHHHHHHHH
Confidence 12246899999975432100 22459999997776665443
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
.++++++++||.|.++...... ..........+..... . + ....+..++||.+++.++.
T Consensus 167 ~e~~~~~i~v~~v~Pg~v~t~~~~~~~--~~~~~~~~~~~~~~~~-~---~------~~~~~~~~~vA~~~~~~~~ 230 (272)
T PRK07832 167 FDLARHGIGVSVVVPGAVKTPLVNTVE--IAGVDREDPRVQKWVD-R---F------RGHAVTPEKAAEKILAGVE 230 (272)
T ss_pred HHhhhcCcEEEEEecCcccCcchhccc--ccccCcchhhHHHHHH-h---c------ccCCCCHHHHHHHHHHHHh
Confidence 7899999999999876432110 0000000000111100 0 0 1235789999999999884
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.35 E-value=3.4e-06 Score=85.33 Aligned_cols=115 Identities=13% Similarity=0.118 Sum_probs=82.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-----hh-------HHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-----EL-------IQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-----~~-------~~~~~~~NV~GT~~LL~ 337 (596)
.++.++.+|++++.. +..++ ..+|+|||+|+..... .+ +...+++|+.|+..+++
T Consensus 52 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 125 (263)
T PRK06200 52 DHVLVVEGDVTSYAD------NQRAVDQTVDAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAK 125 (263)
T ss_pred CcceEEEccCCCHHH------HHHHHHHHHHhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHH
Confidence 468889999997542 33333 3589999999974321 11 34567899999999998
Q ss_pred HHHhc--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 338 LATRC--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 338 ~a~~~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
++... ....++|++||.+.+.... ....|+.||++.+.+
T Consensus 126 ~~~~~~~~~~g~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~ 166 (263)
T PRK06200 126 AALPALKASGGSMIFTLSNSSFYPGG---------------------------------------GGPLYTASKHAVVGL 166 (263)
T ss_pred HHHHHHHhcCCEEEEECChhhcCCCC---------------------------------------CCchhHHHHHHHHHH
Confidence 88742 1225799999987654210 124599999999999
Q ss_pred HHHHh----cCCCEEEecCCccccC
Q psy5825 416 VEKYL----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 416 v~~~~----~gl~~~IlRp~~V~G~ 436 (596)
++.++ +++.+..+.||.|..+
T Consensus 167 ~~~la~el~~~Irvn~i~PG~i~t~ 191 (263)
T PRK06200 167 VRQLAYELAPKIRVNGVAPGGTVTD 191 (263)
T ss_pred HHHHHHHHhcCcEEEEEeCCccccC
Confidence 98876 5689999999998654
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.34 E-value=3.8e-05 Score=77.46 Aligned_cols=115 Identities=16% Similarity=0.109 Sum_probs=80.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh---ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-c--C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ---HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR-C--S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~---~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~-~--~ 343 (596)
.++.++.+|++++. .+..++ ..+|+|||||+.... ...+...+.+|+.|...+++++.. + .
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~ 130 (259)
T PRK06125 57 VDVAVHALDLSSPE------AREQLAAEAGDIDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR 130 (259)
T ss_pred CceEEEEecCCCHH------HHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc
Confidence 46889999998754 244443 468999999997431 123456789999999999888742 1 2
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
+..++|++||....... . ....|+.+|..-+.++...+
T Consensus 131 ~~g~iv~iss~~~~~~~--------------------------------------~-~~~~y~ask~al~~~~~~la~e~ 171 (259)
T PRK06125 131 GSGVIVNVIGAAGENPD--------------------------------------A-DYICGSAGNAALMAFTRALGGKS 171 (259)
T ss_pred CCcEEEEecCccccCCC--------------------------------------C-CchHhHHHHHHHHHHHHHHHHHh
Confidence 23579999886432100 0 11358999999998888764
Q ss_pred --cCCCEEEecCCccccC
Q psy5825 421 --YKLPLAMVRPSIVVST 436 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~ 436 (596)
.|++++.+.||.|..+
T Consensus 172 ~~~gi~v~~i~PG~v~t~ 189 (259)
T PRK06125 172 LDDGVRVVGVNPGPVATD 189 (259)
T ss_pred CccCeEEEEEecCccccH
Confidence 6899999999988654
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=2e-05 Score=80.38 Aligned_cols=168 Identities=9% Similarity=0.021 Sum_probs=105.3
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
+.++.+|++++. ++..++ ..+|++||+|+.... ...+...+.+|+.|+..+++++.
T Consensus 62 ~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~ 135 (272)
T PRK08159 62 FVAGHCDVTDEA------SIDAVFETLEKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAE 135 (272)
T ss_pred ceEEecCCCCHH------HHHHHHHHHHHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHH
Confidence 557899999754 244332 358999999997531 12345688999999999999887
Q ss_pred h-cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 341 R-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 341 ~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
. +..-.++|++||.+.... +| ....|+.||+.-..+++..
T Consensus 136 ~~~~~~g~Iv~iss~~~~~~--------~p-------------------------------~~~~Y~asKaal~~l~~~l 176 (272)
T PRK08159 136 KLMTDGGSILTLTYYGAEKV--------MP-------------------------------HYNVMGVAKAALEASVKYL 176 (272)
T ss_pred HhcCCCceEEEEeccccccC--------CC-------------------------------cchhhhhHHHHHHHHHHHH
Confidence 5 223358999998643211 00 1245999999999888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+.++.||.|..+... ++ .. . ..+....... .|. --+...+|+|++++.++....
T Consensus 177 a~el~~~gIrVn~v~PG~v~T~~~~---~~-~~---~-~~~~~~~~~~---~p~-----~r~~~peevA~~~~~L~s~~~ 240 (272)
T PRK08159 177 AVDLGPKNIRVNAISAGPIKTLAAS---GI-GD---F-RYILKWNEYN---APL-----RRTVTIEEVGDSALYLLSDLS 240 (272)
T ss_pred HHHhcccCeEEEEeecCCcCCHHHh---cC-Cc---c-hHHHHHHHhC---Ccc-----cccCCHHHHHHHHHHHhCccc
Confidence 5 6799999999988553211 10 00 0 0111111101 111 124677999999998885432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|.++.+.++
T Consensus 241 ~~----------------itG~~i~vdgG 253 (272)
T PRK08159 241 RG----------------VTGEVHHVDSG 253 (272)
T ss_pred cC----------------ccceEEEECCC
Confidence 21 35777877776
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.32 E-value=2.1e-05 Score=80.84 Aligned_cols=165 Identities=13% Similarity=0.065 Sum_probs=104.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.- +..++ ..+|++||+|+.... ...+..++++|+.|+..+++++...
T Consensus 64 ~~~~~~~~Dv~~~~~------v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 137 (286)
T PRK07791 64 GEAVANGDDIADWDG------AANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAY 137 (286)
T ss_pred CceEEEeCCCCCHHH------HHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHH
Confidence 467889999997542 33332 468999999997531 1234568899999999998887531
Q ss_pred ---CC------CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHH
Q psy5825 343 ---SQ------LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413 (596)
Q Consensus 343 ---~~------vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE 413 (596)
.. ..+||++||.+.+.... ....|+.||++.+
T Consensus 138 ~~~~~~~~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~ 178 (286)
T PRK07791 138 WRAESKAGRAVDARIINTSSGAGLQGSV---------------------------------------GQGNYSAAKAGIA 178 (286)
T ss_pred HHHhcccCCCCCcEEEEeCchhhCcCCC---------------------------------------CchhhHHHHHHHH
Confidence 00 24899999976532100 1145999999999
Q ss_pred HHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHH
Q psy5825 414 SVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLG 488 (596)
Q Consensus 414 ~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~ 488 (596)
.+++..+ .|+.++.+.|| +..+. . ...+..... . .+ .....+...+++|++++.
T Consensus 179 ~l~~~la~el~~~gIrVn~v~Pg-~~T~~-------~------~~~~~~~~~-~---~~---~~~~~~~~pedva~~~~~ 237 (286)
T PRK07791 179 ALTLVAAAELGRYGVTVNAIAPA-ARTRM-------T------ETVFAEMMA-K---PE---EGEFDAMAPENVSPLVVW 237 (286)
T ss_pred HHHHHHHHHHHHhCeEEEEECCC-CCCCc-------c------hhhHHHHHh-c---Cc---ccccCCCCHHHHHHHHHH
Confidence 8887755 68999999998 42110 0 011111111 0 01 111235678999999998
Q ss_pred HHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 489 VVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++...... ..|+++.+.++
T Consensus 238 L~s~~~~~----------------itG~~i~vdgG 256 (286)
T PRK07791 238 LGSAESRD----------------VTGKVFEVEGG 256 (286)
T ss_pred HhCchhcC----------------CCCcEEEEcCC
Confidence 87543221 35778888776
|
|
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.31 E-value=4.2e-05 Score=74.89 Aligned_cols=161 Identities=12% Similarity=0.054 Sum_probs=104.7
Q ss_pred CcEEEEEeccCCCCCCCCH---HHHHHHhccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---C
Q psy5825 277 RKVHIISGDISQPSLGISS---HDQQFIQHHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC---S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~---~~~~~l~~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~---~ 343 (596)
..+.++.-|+++... -. ..+..-+..+|++||.||..... .++..++++|+.|+.++.++.... .
T Consensus 53 ~~~~~~~~DVtD~~~--~~~~i~~~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r 130 (246)
T COG4221 53 GAALALALDVTDRAA--VEAAIEALPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER 130 (246)
T ss_pred CceEEEeeccCCHHH--HHHHHHHHHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc
Confidence 368899999998642 01 11222234699999999986431 345679999999999999987641 2
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
+...+|.+||++..-. || ..+.|+.|||..-.+.....
T Consensus 131 ~~G~IiN~~SiAG~~~--------y~-------------------------------~~~vY~ATK~aV~~fs~~LR~e~ 171 (246)
T COG4221 131 KSGHIINLGSIAGRYP--------YP-------------------------------GGAVYGATKAAVRAFSLGLRQEL 171 (246)
T ss_pred CCceEEEecccccccc--------CC-------------------------------CCccchhhHHHHHHHHHHHHHHh
Confidence 3448999999874211 11 22679999999988876654
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.+++++.+-||.|......- |. +.+-..-+.... ....++.-+|+|++++.++..+..
T Consensus 172 ~g~~IRVt~I~PG~v~~~~~s~---v~--~~g~~~~~~~~y------------~~~~~l~p~dIA~~V~~~~~~P~~ 231 (246)
T COG4221 172 AGTGIRVTVISPGLVETTEFST---VR--FEGDDERADKVY------------KGGTALTPEDIAEAVLFAATQPQH 231 (246)
T ss_pred cCCCeeEEEecCceecceeccc---cc--CCchhhhHHHHh------------ccCCCCCHHHHHHHHHHHHhCCCc
Confidence 78999999999985532111 10 111001111111 123567889999999999977643
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.30 E-value=5.7e-06 Score=82.88 Aligned_cols=115 Identities=15% Similarity=0.079 Sum_probs=78.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccc-----------cEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHI-----------HVIIHAAASLRFD--------ELIQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~v-----------d~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~ 337 (596)
.+++++.+|++++.. +..++..+ .++||+||..... ..+...+++|+.|+..++.
T Consensus 48 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 121 (251)
T PRK06924 48 SNLTFHSLDLQDVHE------LETNFNEILSSIQEDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTS 121 (251)
T ss_pred CceEEEEecCCCHHH------HHHHHHHHHHhcCcccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHH
Confidence 568899999997643 55544332 1799999875321 2344577889999777776
Q ss_pred HHHhc----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHH
Q psy5825 338 LATRC----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413 (596)
Q Consensus 338 ~a~~~----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE 413 (596)
.+... ....+||++||..++.... ....|+.+|+..+
T Consensus 122 ~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~ 162 (251)
T PRK06924 122 TFMKHTKDWKVDKRVINISSGAAKNPYF---------------------------------------GWSAYCSSKAGLD 162 (251)
T ss_pred HHHHHHhccCCCceEEEecchhhcCCCC---------------------------------------CcHHHhHHHHHHH
Confidence 66431 2346899999976542100 1246999999999
Q ss_pred HHHHHHh-------cCCCEEEecCCccccC
Q psy5825 414 SVVEKYL-------YKLPLAMVRPSIVVST 436 (596)
Q Consensus 414 ~lv~~~~-------~gl~~~IlRp~~V~G~ 436 (596)
.+++.++ .++.+..++||.|-.+
T Consensus 163 ~~~~~la~e~~~~~~~i~v~~v~Pg~v~t~ 192 (251)
T PRK06924 163 MFTQTVATEQEEEEYPVKIVAFSPGVMDTN 192 (251)
T ss_pred HHHHHHHHHhhhcCCCeEEEEecCCccccH
Confidence 9998765 3688999999988543
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.29 E-value=1.1e-05 Score=80.22 Aligned_cols=116 Identities=13% Similarity=0.177 Sum_probs=79.1
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHH---hccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc---CC
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFI---QHHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC---SQ 344 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l---~~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~---~~ 344 (596)
.+.++.+|++++.. -...+..+ +..+|+|||+|+.... ...+...+.+|+.|+..++..+... .+
T Consensus 47 ~~~~~~~D~~~~~~--~~~~~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~ 124 (236)
T PRK06483 47 GAQCIQADFSTNAG--IMAFIDELKQHTDGLRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHG 124 (236)
T ss_pred CCEEEEcCCCCHHH--HHHHHHHHHhhCCCccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCC
Confidence 36788999987642 01112222 2358999999986421 2335568899999999887777642 12
Q ss_pred --CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 345 --LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 345 --vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
..++|++||........ ....|+.||+..+.+++.++
T Consensus 125 ~~~g~iv~~ss~~~~~~~~---------------------------------------~~~~Y~asKaal~~l~~~~a~e 165 (236)
T PRK06483 125 HAASDIIHITDYVVEKGSD---------------------------------------KHIAYAASKAALDNMTLSFAAK 165 (236)
T ss_pred CCCceEEEEcchhhccCCC---------------------------------------CCccHHHHHHHHHHHHHHHHHH
Confidence 35799998865322100 12469999999999998876
Q ss_pred --cCCCEEEecCCccc
Q psy5825 421 --YKLPLAMVRPSIVV 434 (596)
Q Consensus 421 --~gl~~~IlRp~~V~ 434 (596)
+++.+.++.||.|.
T Consensus 166 ~~~~irvn~v~Pg~~~ 181 (236)
T PRK06483 166 LAPEVKVNSIAPALIL 181 (236)
T ss_pred HCCCcEEEEEccCcee
Confidence 46899999999873
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.28 E-value=4.5e-05 Score=77.18 Aligned_cols=153 Identities=12% Similarity=0.013 Sum_probs=96.8
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------h-----hhHHHHHHHHHHHHHHHHHHH
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------D-----ELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~-----~~~~~~~~~NV~GT~~LL~~a 339 (596)
..++.+|++++.- +..++ ..+|++||+|+.... . ..+...+++|+.|+..+++++
T Consensus 58 ~~~~~~Dv~d~~~------v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~ 131 (260)
T PRK06997 58 DLVFPCDVASDEQ------IDALFASLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAA 131 (260)
T ss_pred cceeeccCCCHHH------HHHHHHHHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHH
Confidence 3468899997653 44333 458999999987531 1 133457899999999999888
Q ss_pred Hh-cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 340 TR-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 340 ~~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.. +..-.++|++||++..... + ....|+.||+.-..+.+.
T Consensus 132 lp~m~~~g~Ii~iss~~~~~~~--------~-------------------------------~~~~Y~asKaal~~l~~~ 172 (260)
T PRK06997 132 LPMLSDDASLLTLSYLGAERVV--------P-------------------------------NYNTMGLAKASLEASVRY 172 (260)
T ss_pred HHhcCCCceEEEEeccccccCC--------C-------------------------------CcchHHHHHHHHHHHHHH
Confidence 75 2223579999987542110 0 124699999999998887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.+ .|+.++.+-||.|-.+... ++ ....... ...... .| .--+...+|++++++.++..
T Consensus 173 la~el~~~gIrVn~i~PG~v~T~~~~---~~----~~~~~~~-~~~~~~---~p-----~~r~~~pedva~~~~~l~s~ 235 (260)
T PRK06997 173 LAVSLGPKGIRANGISAGPIKTLAAS---GI----KDFGKIL-DFVESN---AP-----LRRNVTIEEVGNVAAFLLSD 235 (260)
T ss_pred HHHHhcccCeEEEEEeeCccccchhc---cc----cchhhHH-HHHHhc---Cc-----ccccCCHHHHHHHHHHHhCc
Confidence 65 6799999999988543210 00 0001111 111111 11 11357789999999998754
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.27 E-value=1.1e-05 Score=79.46 Aligned_cols=115 Identities=11% Similarity=0.064 Sum_probs=80.6
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh---c--cccEEEEcCccCCh---------hhhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ---H--HIHVIIHAAASLRF---------DELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~---~--~vd~ViH~AA~v~~---------~~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.+.++.+|+++.. .+..++ . .+|+|||+|+.... ...+..++.+|+.|+.++++++...
T Consensus 45 ~~~~~~~D~~~~~------~v~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 118 (222)
T PRK06953 45 GAEALALDVADPA------SVAGLAWKLDGEALDAAVYVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLV 118 (222)
T ss_pred cceEEEecCCCHH------HHHHHHHHhcCCCCCEEEECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhh
Confidence 3568899999764 244432 2 48999999997621 2235668999999999999998751
Q ss_pred -CCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 -SQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
....+||++||... ++.... . ....|+.+|...+.++..+.
T Consensus 119 ~~~~g~iv~isS~~~~~~~~~~------------------------------------~-~~~~Y~~sK~a~~~~~~~~~ 161 (222)
T PRK06953 119 EAAGGVLAVLSSRMGSIGDATG------------------------------------T-TGWLYRASKAALNDALRAAS 161 (222)
T ss_pred hccCCeEEEEcCcccccccccC------------------------------------C-CccccHHhHHHHHHHHHHHh
Confidence 12347899988643 332100 0 11359999999999998876
Q ss_pred ---cCCCEEEecCCcccc
Q psy5825 421 ---YKLPLAMVRPSIVVS 435 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G 435 (596)
.+++++.++||.|..
T Consensus 162 ~~~~~i~v~~v~Pg~i~t 179 (222)
T PRK06953 162 LQARHATCIALHPGWVRT 179 (222)
T ss_pred hhccCcEEEEECCCeeec
Confidence 578899999888744
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=98.27 E-value=6.8e-06 Score=83.10 Aligned_cols=116 Identities=14% Similarity=0.110 Sum_probs=81.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh------------hhHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD------------ELIQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~------------~~~~~~~~~NV~GT~~LL~ 337 (596)
.++.++.+|+++... +..++ ..+|+|||+||..... ..+...+++|+.|+.++++
T Consensus 51 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 124 (262)
T TIGR03325 51 DAVVGVEGDVRSLDD------HKEAVARCVAAFGKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVK 124 (262)
T ss_pred CceEEEEeccCCHHH------HHHHHHHHHHHhCCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHH
Confidence 468889999987532 33333 3579999999864211 1245688999999999999
Q ss_pred HHHhc--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 338 LATRC--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 338 ~a~~~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
++... ..-.++|++||...+.... ....|+.||...+.+
T Consensus 125 ~~~~~~~~~~g~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~l 165 (262)
T TIGR03325 125 AALPALVASRGSVIFTISNAGFYPNG---------------------------------------GGPLYTAAKHAVVGL 165 (262)
T ss_pred HHHHHHhhcCCCEEEEeccceecCCC---------------------------------------CCchhHHHHHHHHHH
Confidence 99752 1224788888865432100 124699999999999
Q ss_pred HHHHh----cCCCEEEecCCccccCC
Q psy5825 416 VEKYL----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 416 v~~~~----~gl~~~IlRp~~V~G~~ 437 (596)
++.++ +.+.++.+.||.|..+.
T Consensus 166 ~~~la~e~~~~irvn~i~PG~i~t~~ 191 (262)
T TIGR03325 166 VKELAFELAPYVRVNGVAPGGMSSDL 191 (262)
T ss_pred HHHHHHhhccCeEEEEEecCCCcCCC
Confidence 98876 34889999999986553
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.26 E-value=4.8e-05 Score=77.57 Aligned_cols=112 Identities=13% Similarity=0.108 Sum_probs=79.1
Q ss_pred EEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 280 HIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 280 ~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.+|++++.- +..++ ..+|++||+||.... ...+...+.+|+.|+.++++++..
T Consensus 60 ~~~~~Dv~d~~~------v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~ 133 (271)
T PRK06505 60 FVLPCDVEDIAS------VDAVFEALEKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAK 133 (271)
T ss_pred eEEeCCCCCHHH------HHHHHHHHHHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHH
Confidence 468899997542 33332 458999999997531 123455788999999999888764
Q ss_pred -cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 -CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 -~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
+..-.++|++||.+..... | ....|+.||+....+++..+
T Consensus 134 ~m~~~G~Iv~isS~~~~~~~--------~-------------------------------~~~~Y~asKaAl~~l~r~la 174 (271)
T PRK06505 134 LMPDGGSMLTLTYGGSTRVM--------P-------------------------------NYNVMGVAKAALEASVRYLA 174 (271)
T ss_pred hhccCceEEEEcCCCccccC--------C-------------------------------ccchhhhhHHHHHHHHHHHH
Confidence 2222589999987542210 0 12459999999998887765
Q ss_pred -----cCCCEEEecCCccccC
Q psy5825 421 -----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~ 436 (596)
.|+.++.+.||.|-.+
T Consensus 175 ~el~~~gIrVn~v~PG~i~T~ 195 (271)
T PRK06505 175 ADYGPQGIRVNAISAGPVRTL 195 (271)
T ss_pred HHHhhcCeEEEEEecCCcccc
Confidence 6899999999998554
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.20 E-value=2.7e-05 Score=78.67 Aligned_cols=115 Identities=12% Similarity=0.041 Sum_probs=80.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh--------hh---hHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF--------DE---LIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~--------~~---~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+|++++.. +..++ ..+|++||||+.... .. .+...+++|+.|+..++++
T Consensus 59 ~~~~~~~~Dv~d~~~------v~~~~~~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 132 (257)
T PRK08594 59 QESLLLPCDVTSDEE------ITACFETIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVARE 132 (257)
T ss_pred CceEEEecCCCCHHH------HHHHHHHHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHH
Confidence 468889999997643 33332 358999999986431 11 2334678999999988888
Q ss_pred HHh-cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 339 ATR-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 339 a~~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
+.. +..-.+||++||....-.. + ....|+.||++.+.+++
T Consensus 133 ~~~~~~~~g~Iv~isS~~~~~~~--------~-------------------------------~~~~Y~asKaal~~l~~ 173 (257)
T PRK08594 133 AKKLMTEGGSIVTLTYLGGERVV--------Q-------------------------------NYNVMGVAKASLEASVK 173 (257)
T ss_pred HHHhcccCceEEEEcccCCccCC--------C-------------------------------CCchhHHHHHHHHHHHH
Confidence 764 2223589999987642110 0 11469999999999987
Q ss_pred HHh-----cCCCEEEecCCccccC
Q psy5825 418 KYL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~ 436 (596)
..+ .|+.++.+.||.|-.+
T Consensus 174 ~la~el~~~gIrvn~v~PG~v~T~ 197 (257)
T PRK08594 174 YLANDLGKDGIRVNAISAGPIRTL 197 (257)
T ss_pred HHHHHhhhcCCEEeeeecCcccCH
Confidence 765 6899999999988554
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.20 E-value=7.3e-05 Score=83.44 Aligned_cols=115 Identities=18% Similarity=0.109 Sum_probs=83.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC-----h----hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR-----F----DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~-----~----~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++. ++..++ ..+|+|||+||... + ...+..++.+|+.|+..+++++.
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 124 (520)
T PRK06484 51 PDHHALAMDVSDEA------QIREGFEQLHREFGRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREAL 124 (520)
T ss_pred CceeEEEeccCCHH------HHHHHHHHHHHHhCCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45778999999764 244443 35899999998632 1 12345688999999999999887
Q ss_pred hc---CCC-ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 341 RC---SQL-KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 341 ~~---~~v-krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
.. .+. .+||++||........ ....|+.+|+..+.++
T Consensus 125 ~~~~~~~~g~~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~l~ 165 (520)
T PRK06484 125 RLMIEQGHGAAIVNVASGAGLVALP---------------------------------------KRTAYSASKAAVISLT 165 (520)
T ss_pred HHHHhcCCCCeEEEECCcccCCCCC---------------------------------------CCchHHHHHHHHHHHH
Confidence 52 122 3899999976543210 1246999999999988
Q ss_pred HHHh-----cCCCEEEecCCccccC
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~ 436 (596)
+..+ .++.++++.||.|-.+
T Consensus 166 ~~la~e~~~~~i~v~~i~Pg~v~t~ 190 (520)
T PRK06484 166 RSLACEWAAKGIRVNAVLPGYVRTQ 190 (520)
T ss_pred HHHHHHhhhhCeEEEEEccCCcCch
Confidence 7655 5799999999988554
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=6.8e-05 Score=75.90 Aligned_cols=153 Identities=11% Similarity=-0.001 Sum_probs=95.8
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh--------h-h---hHHHHHHHHHHHHHHHHHHH
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF--------D-E---LIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~--------~-~---~~~~~~~~NV~GT~~LL~~a 339 (596)
..++.+|++++. ++..++ ..+|++||+||.... . . .+...+.+|+.|+..+++.+
T Consensus 58 ~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~ 131 (261)
T PRK08690 58 ELVFRCDVASDD------EINQVFADLGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAA 131 (261)
T ss_pred ceEEECCCCCHH------HHHHHHHHHHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHH
Confidence 457899999754 344333 358999999998632 1 1 23446788999998888876
Q ss_pred Hhc--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 340 TRC--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 340 ~~~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
... .+-.+||++||.+.+.... ....|+.||+.-+.+++
T Consensus 132 ~p~m~~~~g~Iv~iss~~~~~~~~---------------------------------------~~~~Y~asKaal~~l~~ 172 (261)
T PRK08690 132 RPMMRGRNSAIVALSYLGAVRAIP---------------------------------------NYNVMGMAKASLEAGIR 172 (261)
T ss_pred HHHhhhcCcEEEEEcccccccCCC---------------------------------------CcccchhHHHHHHHHHH
Confidence 541 1225799999876432100 12459999999998887
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+ .|+.+..+.||.|-.+... ++ .....+... .... .| ...+...+|||++++.++..
T Consensus 173 ~la~e~~~~gIrVn~i~PG~v~T~~~~---~~----~~~~~~~~~-~~~~---~p-----~~r~~~peevA~~v~~l~s~ 236 (261)
T PRK08690 173 FTAACLGKEGIRCNGISAGPIKTLAAS---GI----ADFGKLLGH-VAAH---NP-----LRRNVTIEEVGNTAAFLLSD 236 (261)
T ss_pred HHHHHhhhcCeEEEEEecCcccchhhh---cC----CchHHHHHH-Hhhc---CC-----CCCCCCHHHHHHHHHHHhCc
Confidence 654 7899999999998543211 11 101111111 1111 11 12366789999999998864
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=98.18 E-value=3.2e-05 Score=77.22 Aligned_cols=166 Identities=16% Similarity=0.112 Sum_probs=108.0
Q ss_pred EEEeccCCCCCCCCHHHHHHH-------h-ccccEEEEcCccCCh---h--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 281 IISGDISQPSLGISSHDQQFI-------Q-HHIHVIIHAAASLRF---D--------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 281 ~v~GDl~~~~lGL~~~~~~~l-------~-~~vd~ViH~AA~v~~---~--------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
++.+|++++. ++..+ + ..+|++||+|+.... . ..+...+.+|+.+...+++++..
T Consensus 48 ~~~~D~~~~~------~v~~~~~~~~~~~~g~iD~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 121 (241)
T PF13561_consen 48 VIQCDLSDEE------SVEALFDEAVERFGGRIDILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALP 121 (241)
T ss_dssp EEESCTTSHH------HHHHHHHHHHHHHCSSESEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred eEeecCcchH------HHHHHHHHHHhhcCCCeEEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 5999998654 34444 3 568999999987653 1 23456789999999999998854
Q ss_pred c-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 C-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 ~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
. ..-..+|++||.+...... ....|+.+|+.-+.+++.++
T Consensus 122 ~~~~~gsii~iss~~~~~~~~---------------------------------------~~~~y~~sKaal~~l~r~lA 162 (241)
T PF13561_consen 122 LMKKGGSIINISSIAAQRPMP---------------------------------------GYSAYSASKAALEGLTRSLA 162 (241)
T ss_dssp HHHHEEEEEEEEEGGGTSBST---------------------------------------TTHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCcccccchhhcccCc---------------------------------------cchhhHHHHHHHHHHHHHHH
Confidence 1 2236899999886543210 12369999999999998876
Q ss_pred ----c--CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 421 ----Y--KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 421 ----~--gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ |+++..+.||.|..+.... ......+...+.. ..|. --+...+|||++++.++-...
T Consensus 163 ~el~~~~gIrVN~V~pG~i~t~~~~~-------~~~~~~~~~~~~~----~~pl-----~r~~~~~evA~~v~fL~s~~a 226 (241)
T PF13561_consen 163 KELAPKKGIRVNAVSPGPIETPMTER-------IPGNEEFLEELKK----RIPL-----GRLGTPEEVANAVLFLASDAA 226 (241)
T ss_dssp HHHGGHGTEEEEEEEESSBSSHHHHH-------HHTHHHHHHHHHH----HSTT-----SSHBEHHHHHHHHHHHHSGGG
T ss_pred HHhccccCeeeeeecccceeccchhc-------cccccchhhhhhh----hhcc-----CCCcCHHHHHHHHHHHhCccc
Confidence 5 8999999999885432100 0000111111111 1111 125688999999999986543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. -.|+++.+.+|
T Consensus 227 ~~----------------itG~~i~vDGG 239 (241)
T PF13561_consen 227 SY----------------ITGQVIPVDGG 239 (241)
T ss_dssp TT----------------GTSEEEEESTT
T ss_pred cC----------------ccCCeEEECCC
Confidence 21 35788887765
|
... |
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.18 E-value=0.00014 Score=72.94 Aligned_cols=149 Identities=19% Similarity=0.185 Sum_probs=99.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh----c---cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ----H---HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~----~---~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
-.+.++..||+++.- +..+. + .||++|++||...+. .....++++|+.++..|-.+...
T Consensus 56 v~v~vi~~DLs~~~~------~~~l~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~ 129 (265)
T COG0300 56 VEVEVIPADLSDPEA------LERLEDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPG 129 (265)
T ss_pred ceEEEEECcCCChhH------HHHHHHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 468899999998763 44433 2 599999999986543 23346899999999988877654
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
+ .+-..+|.|+|.+.+-... +...|+.||+.-=.+-...
T Consensus 130 m~~~~~G~IiNI~S~ag~~p~p---------------------------------------~~avY~ATKa~v~~fSeaL 170 (265)
T COG0300 130 MVERGAGHIINIGSAAGLIPTP---------------------------------------YMAVYSATKAFVLSFSEAL 170 (265)
T ss_pred HHhcCCceEEEEechhhcCCCc---------------------------------------chHHHHHHHHHHHHHHHHH
Confidence 1 2446899999988764311 3356999998765544443
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|+.|+.|-||.|.-.... . .+.. ... .....-++..++||++.+.++..
T Consensus 171 ~~EL~~~gV~V~~v~PG~~~T~f~~-------~------------~~~~-~~~--~~~~~~~~~~~~va~~~~~~l~~ 226 (265)
T COG0300 171 REELKGTGVKVTAVCPGPTRTEFFD-------A------------KGSD-VYL--LSPGELVLSPEDVAEAALKALEK 226 (265)
T ss_pred HHHhcCCCeEEEEEecCcccccccc-------c------------cccc-ccc--ccchhhccCHHHHHHHHHHHHhc
Confidence 3 7899999999988543210 0 0000 000 11234578889999999998865
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.18 E-value=9.8e-05 Score=74.70 Aligned_cols=152 Identities=11% Similarity=0.026 Sum_probs=95.4
Q ss_pred EEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC-------hh----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 280 HIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR-------FD----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 280 ~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~-------~~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.+|++++.- +..++ ..+|++||+|+... +. ..+...+.+|+.|+..+++.+..
T Consensus 61 ~~~~~Dv~~~~~------v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~ 134 (260)
T PRK06603 61 FVSELDVTNPKS------ISNLFDDIKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEA 134 (260)
T ss_pred eEEEccCCCHHH------HHHHHHHHHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 467899997642 33333 35899999998642 11 23456889999999999988754
Q ss_pred -cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 -CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 -~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
+..-.++|++||.+..... + ....|+.||+..+.+.+..+
T Consensus 135 ~m~~~G~Iv~isS~~~~~~~--------~-------------------------------~~~~Y~asKaal~~l~~~la 175 (260)
T PRK06603 135 LMHDGGSIVTLTYYGAEKVI--------P-------------------------------NYNVMGVAKAALEASVKYLA 175 (260)
T ss_pred hhccCceEEEEecCccccCC--------C-------------------------------cccchhhHHHHHHHHHHHHH
Confidence 2222589999986543210 0 12459999999999887765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|+.+..+-||.|-.+.... + .........+. .. .| ..-+...+|+|++++.++..
T Consensus 176 ~el~~~gIrVn~v~PG~v~T~~~~~---~----~~~~~~~~~~~-~~---~p-----~~r~~~pedva~~~~~L~s~ 236 (260)
T PRK06603 176 NDMGENNIRVNAISAGPIKTLASSA---I----GDFSTMLKSHA-AT---AP-----LKRNTTQEDVGGAAVYLFSE 236 (260)
T ss_pred HHhhhcCeEEEEEecCcCcchhhhc---C----CCcHHHHHHHH-hc---CC-----cCCCCCHHHHHHHHHHHhCc
Confidence 68999999999985432110 0 01111111111 11 11 11245679999999998754
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.17 E-value=2e-05 Score=80.45 Aligned_cols=112 Identities=20% Similarity=0.171 Sum_probs=79.4
Q ss_pred EEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 280 HIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 280 ~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.+|++++.. +..++ ..+|++||+|+.... ...+...+++|+.|+..+++++..
T Consensus 58 ~~~~~Dv~d~~~------v~~~~~~i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p 131 (274)
T PRK08415 58 YVYELDVSKPEH------FKSLAESLKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLP 131 (274)
T ss_pred eEEEecCCCHHH------HHHHHHHHHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHH
Confidence 578899997642 33332 458999999996421 123456889999999999988875
Q ss_pred -cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 -CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 -~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
+..-.+||++||.+..... + ....|+.||+....+.+..+
T Consensus 132 ~m~~~g~Iv~isS~~~~~~~--------~-------------------------------~~~~Y~asKaal~~l~~~la 172 (274)
T PRK08415 132 LLNDGASVLTLSYLGGVKYV--------P-------------------------------HYNVMGVAKAALESSVRYLA 172 (274)
T ss_pred HhccCCcEEEEecCCCccCC--------C-------------------------------cchhhhhHHHHHHHHHHHHH
Confidence 2223589999987532210 0 12459999999998887765
Q ss_pred -----cCCCEEEecCCccccC
Q psy5825 421 -----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~ 436 (596)
.|+.+..+-||.|..+
T Consensus 173 ~el~~~gIrVn~v~PG~v~T~ 193 (274)
T PRK08415 173 VDLGKKGIRVNAISAGPIKTL 193 (274)
T ss_pred HHhhhcCeEEEEEecCccccH
Confidence 6899999999988553
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=98.16 E-value=3.2e-05 Score=80.87 Aligned_cols=120 Identities=13% Similarity=0.125 Sum_probs=80.5
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCCh-----h----hhHHHHHHHHHHHHHHHHHHHHhc---C
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRF-----D----ELIQDAFTLNIQATRELLDLATRC---S 343 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~-----~----~~~~~~~~~NV~GT~~LL~~a~~~---~ 343 (596)
++.++.+|+++. +.-....+...+.+ +|++||+||.... . ..+...+++|+.|+.++++++... .
T Consensus 105 ~~~~~~~Dl~~~-~~~~~~~l~~~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~ 183 (320)
T PLN02780 105 QIKTVVVDFSGD-IDEGVKRIKETIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR 183 (320)
T ss_pred EEEEEEEECCCC-cHHHHHHHHHHhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc
Confidence 577888999841 10001122233333 5699999997521 1 123458899999999999987641 3
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
+..+||++||.+.+.... . | ....|+.||+..+.+....+
T Consensus 184 ~~g~IV~iSS~a~~~~~~------~-------------------------p------~~~~Y~aSKaal~~~~~~L~~El 226 (320)
T PLN02780 184 KKGAIINIGSGAAIVIPS------D-------------------------P------LYAVYAATKAYIDQFSRCLYVEY 226 (320)
T ss_pred CCcEEEEEechhhccCCC------C-------------------------c------cchHHHHHHHHHHHHHHHHHHHH
Confidence 456899999987642100 0 0 22469999999999887765
Q ss_pred --cCCCEEEecCCcccc
Q psy5825 421 --YKLPLAMVRPSIVVS 435 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G 435 (596)
.|+.++++.||.|-.
T Consensus 227 ~~~gI~V~~v~PG~v~T 243 (320)
T PLN02780 227 KKSGIDVQCQVPLYVAT 243 (320)
T ss_pred hccCeEEEEEeeCceec
Confidence 589999999998844
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.12 E-value=1.4e-05 Score=78.82 Aligned_cols=116 Identities=18% Similarity=0.153 Sum_probs=77.9
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-----cccEEEEcCccCChh---------hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-----HIHVIIHAAASLRFD---------ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-----~vd~ViH~AA~v~~~---------~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
++.++.+|++++. .+..++. .+|+|||+|+..... ..+...+.+|+.|+.+|++++...
T Consensus 46 ~~~~~~~D~~d~~------~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (225)
T PRK08177 46 GVHIEKLDMNDPA------SLDQLLQRLQGQRFDLLFVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQV 119 (225)
T ss_pred ccceEEcCCCCHH------HHHHHHHHhhcCCCCEEEEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhh
Confidence 5677889998754 2444433 589999999875321 233457788999999999988642
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+...++++||........ + .. ....|+.+|++.+.+++.++
T Consensus 120 ~~~~~~iv~~ss~~g~~~~~--------~---------------------------~~-~~~~Y~~sK~a~~~~~~~l~~ 163 (225)
T PRK08177 120 RPGQGVLAFMSSQLGSVELP--------D---------------------------GG-EMPLYKASKAALNSMTRSFVA 163 (225)
T ss_pred hhcCCEEEEEccCccccccC--------C---------------------------CC-CccchHHHHHHHHHHHHHHHH
Confidence 1225688888753221100 0 00 11359999999999998765
Q ss_pred ----cCCCEEEecCCcccc
Q psy5825 421 ----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G 435 (596)
.++.+..++||.|-.
T Consensus 164 e~~~~~i~v~~i~PG~i~t 182 (225)
T PRK08177 164 ELGEPTLTVLSMHPGWVKT 182 (225)
T ss_pred HhhcCCeEEEEEcCCceec
Confidence 568899999998844
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.10 E-value=0.00014 Score=73.31 Aligned_cols=155 Identities=10% Similarity=0.009 Sum_probs=95.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------h----hhHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------D----ELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~----~~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+|++++.- +..++ ..+|++||+||.... . ..+...+.+|+.|+..++.+
T Consensus 57 ~~~~~~~~Dv~~~~~------i~~~~~~~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~ 130 (256)
T PRK07889 57 EPAPVLELDVTNEEH------LASLADRVREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKA 130 (256)
T ss_pred CCCcEEeCCCCCHHH------HHHHHHHHHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 356789999997642 33332 458999999997521 1 22344689999999999888
Q ss_pred HHh-cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 339 ATR-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 339 a~~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
+.. +..-.++|++|+....+. | ....|+.||+.-..+++
T Consensus 131 ~~~~m~~~g~Iv~is~~~~~~~----------------------------------~------~~~~Y~asKaal~~l~~ 170 (256)
T PRK07889 131 LLPLMNEGGSIVGLDFDATVAW----------------------------------P------AYDWMGVAKAALESTNR 170 (256)
T ss_pred HHHhcccCceEEEEeecccccC----------------------------------C------ccchhHHHHHHHHHHHH
Confidence 764 222247888875432110 0 11359999999998887
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+ .|+.++.+.||.|-.+.....+ +...+. ..... ..+. ...+...+++|++++.++..
T Consensus 171 ~la~el~~~gIrvn~v~PG~v~T~~~~~~~-------~~~~~~-~~~~~---~~p~----~~~~~~p~evA~~v~~l~s~ 235 (256)
T PRK07889 171 YLARDLGPRGIRVNLVAAGPIRTLAAKAIP-------GFELLE-EGWDE---RAPL----GWDVKDPTPVARAVVALLSD 235 (256)
T ss_pred HHHHHhhhcCeEEEeeccCcccChhhhccc-------CcHHHH-HHHHh---cCcc----ccccCCHHHHHHHHHHHhCc
Confidence 755 6899999999988554221111 101111 11110 1111 11356789999999988754
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=6e-05 Score=76.04 Aligned_cols=115 Identities=14% Similarity=0.035 Sum_probs=77.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----h----hhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----D----ELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----~----~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++. ++..++ ..+|+|||+||.... . ..+...+.+|+.++..++.++.
T Consensus 48 ~~~~~~~~Dv~d~~------~~~~~~~~~~~~~g~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l 121 (259)
T PRK08340 48 GEVYAVKADLSDKD------DLKNLVKEAWELLGGIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLI 121 (259)
T ss_pred CCceEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHH
Confidence 35788999999754 244443 368999999997431 1 1223356778888766555432
Q ss_pred h----cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 341 R----CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 341 ~----~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
. ..+..+||++||..+..... ....|+.||+..+.++
T Consensus 122 ~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~y~~sKaa~~~~~ 162 (259)
T PRK08340 122 QAWLEKKMKGVLVYLSSVSVKEPMP---------------------------------------PLVLADVTRAGLVQLA 162 (259)
T ss_pred HHHHhcCCCCEEEEEeCcccCCCCC---------------------------------------CchHHHHHHHHHHHHH
Confidence 2 12346899999987643210 1246999999999998
Q ss_pred HHHh-----cCCCEEEecCCccccC
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~ 436 (596)
+.++ .|+.+..+.||.|-.+
T Consensus 163 ~~la~e~~~~gI~v~~v~pG~v~t~ 187 (259)
T PRK08340 163 KGVSRTYGGKGIRAYTVLLGSFDTP 187 (259)
T ss_pred HHHHHHhCCCCEEEEEeccCcccCc
Confidence 8766 5788999999887443
|
|
| >PRK09009 C factor cell-cell signaling protein; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=8.8e-05 Score=73.49 Aligned_cols=152 Identities=13% Similarity=0.078 Sum_probs=97.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh-------------hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD-------------ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~-------------~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++.. ...+...+.++|+|||+||..... ..+...+.+|+.|+..++..+...
T Consensus 43 ~~~~~~~~Dls~~~~---~~~~~~~~~~id~li~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~ 119 (235)
T PRK09009 43 DNVQWHALDVTDEAE---IKQLSEQFTQLDWLINCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKL 119 (235)
T ss_pred CceEEEEecCCCHHH---HHHHHHhcCCCCEEEECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhc
Confidence 578899999997642 111223345799999999986321 123457889999999998888652
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..+++++||.. |... ...+ + ....|+.+|+..+.++...+
T Consensus 120 ~~~~~~~i~~iss~~--~~~~---~~~~-------------------------~------~~~~Y~asK~a~~~~~~~la 163 (235)
T PRK09009 120 KQSESAKFAVISAKV--GSIS---DNRL-------------------------G------GWYSYRASKAALNMFLKTLS 163 (235)
T ss_pred cccCCceEEEEeecc--cccc---cCCC-------------------------C------CcchhhhhHHHHHHHHHHHH
Confidence 2335788988743 1100 0000 0 11359999999999987765
Q ss_pred -------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 421 -------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 421 -------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.++.+..+.||.|..+... .+.. ..+ ...++..+++|++++.++...
T Consensus 164 ~e~~~~~~~i~v~~v~PG~v~t~~~~-----------------~~~~----~~~-----~~~~~~~~~~a~~~~~l~~~~ 217 (235)
T PRK09009 164 IEWQRSLKHGVVLALHPGTTDTALSK-----------------PFQQ----NVP-----KGKLFTPEYVAQCLLGIIANA 217 (235)
T ss_pred HHhhcccCCeEEEEEcccceecCCCc-----------------chhh----ccc-----cCCCCCHHHHHHHHHHHHHcC
Confidence 2677888888888554210 0000 011 122578899999999988764
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=5.1e-05 Score=74.93 Aligned_cols=107 Identities=13% Similarity=0.077 Sum_probs=77.3
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHhc----cccEEEEcCccCC---------h---hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQH----HIHVIIHAAASLR---------F---DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~~----~vd~ViH~AA~v~---------~---~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
+.++.+|++++. .+..++. .+|+|||+|+... + ...+..++++|+.|+.++++++..
T Consensus 46 ~~~~~~D~~~~~------~v~~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 119 (223)
T PRK05884 46 VDAIVCDNTDPA------SLEEARGLFPHHLDTIVNVPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDH 119 (223)
T ss_pred CcEEecCCCCHH------HHHHHHHHHhhcCcEEEECCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567889998654 3444443 5899999997421 1 123456889999999999999875
Q ss_pred cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 342 CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 342 ~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
+....+||++||.... ....|+.||+.-..+++.++
T Consensus 120 ~~~~g~Iv~isS~~~~-------------------------------------------~~~~Y~asKaal~~~~~~la~ 156 (223)
T PRK05884 120 LRSGGSIISVVPENPP-------------------------------------------AGSAEAAIKAALSNWTAGQAA 156 (223)
T ss_pred hhcCCeEEEEecCCCC-------------------------------------------CccccHHHHHHHHHHHHHHHH
Confidence 2223589999986410 11359999999999987765
Q ss_pred ----cCCCEEEecCCccc
Q psy5825 421 ----YKLPLAMVRPSIVV 434 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~ 434 (596)
.|+.++.+.||.|.
T Consensus 157 e~~~~gI~v~~v~PG~v~ 174 (223)
T PRK05884 157 VFGTRGITINAVACGRSV 174 (223)
T ss_pred HhhhcCeEEEEEecCccC
Confidence 67899999998874
|
|
| >KOG4039|consensus | Back alignment and domain information |
|---|
Probab=98.00 E-value=8.3e-06 Score=75.18 Aligned_cols=118 Identities=16% Similarity=0.083 Sum_probs=87.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
..|..+..|.... +++....+++|+.|-|-|.+......+.++.+.-.-...+.++|.. .+++.||.+||.++
T Consensus 62 k~v~q~~vDf~Kl------~~~a~~~qg~dV~FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe-~Gck~fvLvSS~GA 134 (238)
T KOG4039|consen 62 KVVAQVEVDFSKL------SQLATNEQGPDVLFCALGTTRGKAGADGFYKVDHDYVLQLAQAAKE-KGCKTFVLVSSAGA 134 (238)
T ss_pred ceeeeEEechHHH------HHHHhhhcCCceEEEeecccccccccCceEeechHHHHHHHHHHHh-CCCeEEEEEeccCC
Confidence 4566667776642 2355666889999999998876665666777777778889999999 79999999999886
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
... ..-.|-..|-..|+-|.+.- =-.++|+|||.+.|.
T Consensus 135 d~s-----------------------------------------SrFlY~k~KGEvE~~v~eL~-F~~~~i~RPG~ll~~ 172 (238)
T KOG4039|consen 135 DPS-----------------------------------------SRFLYMKMKGEVERDVIELD-FKHIIILRPGPLLGE 172 (238)
T ss_pred Ccc-----------------------------------------cceeeeeccchhhhhhhhcc-ccEEEEecCcceecc
Confidence 432 11348888888888776642 125899999999998
Q ss_pred CCCCccc
Q psy5825 437 WKEPIVG 443 (596)
Q Consensus 437 ~~~p~~G 443 (596)
..+..+|
T Consensus 173 R~esr~g 179 (238)
T KOG4039|consen 173 RTESRQG 179 (238)
T ss_pred ccccccc
Confidence 7765433
|
|
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.99 E-value=9.1e-05 Score=77.21 Aligned_cols=147 Identities=14% Similarity=0.117 Sum_probs=81.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+||++..- +..++ ..+|++||+||.... ...+...+.+|+.|+..|++++..
T Consensus 53 ~~~~~~~~Dl~~~~~------v~~~~~~~~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~ 126 (314)
T TIGR01289 53 DSYTIMHLDLGSLDS------VRQFVQQFRESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLD 126 (314)
T ss_pred CeEEEEEcCCCCHHH------HHHHHHHHHHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHH
Confidence 467889999997642 33332 358999999997431 123456789999999888777654
Q ss_pred c---C--CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 342 C---S--QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 342 ~---~--~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
. . +..+||++||+..+..... .. ++++.+...+......+... ......... . ....|+.||++...+.
T Consensus 127 ~m~~~~~~~g~IV~vsS~~~~~~~~~--~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~-~-~~~~Y~~SK~a~~~~~ 200 (314)
T TIGR01289 127 DLKNSPNKDKRLIIVGSITGNTNTLA--GN-VPPKANLGDLSGLAAGFKAP-IAMIDGKEF-K-GAKAYKDSKVCNMLTV 200 (314)
T ss_pred HHHhCCCCCCeEEEEecCccccccCC--Cc-CCCcccccccccccccCCCc-ccccCCCCc-c-hhhhHHHhHHHHHHHH
Confidence 1 1 1369999999877542100 00 00000000000000000000 000000000 0 1246999999977766
Q ss_pred HHHh------cCCCEEEecCCcccc
Q psy5825 417 EKYL------YKLPLAMVRPSIVVS 435 (596)
Q Consensus 417 ~~~~------~gl~~~IlRp~~V~G 435 (596)
.... .|+.++.+.||.|..
T Consensus 201 ~~la~~~~~~~gi~v~~v~PG~v~~ 225 (314)
T TIGR01289 201 RELHRRFHDETGITFASLYPGCIAD 225 (314)
T ss_pred HHHHHHhccCCCeEEEEecCCcccC
Confidence 5553 368899999999843
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.98 E-value=7.8e-05 Score=75.62 Aligned_cols=154 Identities=11% Similarity=0.002 Sum_probs=95.8
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh------------hhhHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF------------DELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~------------~~~~~~~~~~NV~GT~~LL~~ 338 (596)
.+.++.+|++++. ++..++ ..+|++||+||.... ...+...+++|+.|...+.++
T Consensus 57 ~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~ 130 (262)
T PRK07984 57 SDIVLPCDVAEDA------SIDAMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 130 (262)
T ss_pred CceEeecCCCCHH------HHHHHHHHHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHH
Confidence 4667889999754 344443 347999999986421 112345778999999888888
Q ss_pred HHhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 339 ATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 339 a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
+..+ ..-.+||++||++..... + ....|+.||..-+.+++
T Consensus 131 ~~~~~~~~g~Iv~iss~~~~~~~--------~-------------------------------~~~~Y~asKaal~~l~~ 171 (262)
T PRK07984 131 CRSMLNPGSALLTLSYLGAERAI--------P-------------------------------NYNVMGLAKASLEANVR 171 (262)
T ss_pred HHHHhcCCcEEEEEecCCCCCCC--------C-------------------------------CcchhHHHHHHHHHHHH
Confidence 7542 122579999987542110 0 12359999999999998
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+ .|+.+..+-||.|--+... ++ .....+...+ ... .+ ..-+...+|++++++.++..
T Consensus 172 ~la~el~~~gIrVn~i~PG~v~T~~~~---~~----~~~~~~~~~~-~~~---~p-----~~r~~~pedva~~~~~L~s~ 235 (262)
T PRK07984 172 YMANAMGPEGVRVNAISAGPIRTLAAS---GI----KDFRKMLAHC-EAV---TP-----IRRTVTIEDVGNSAAFLCSD 235 (262)
T ss_pred HHHHHhcccCcEEeeeecCcccchHHh---cC----CchHHHHHHH-HHc---CC-----CcCCCCHHHHHHHHHHHcCc
Confidence 765 5899999999988443110 00 0001111111 111 11 12356779999999988754
|
|
| >KOG1205|consensus | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00011 Score=74.37 Aligned_cols=102 Identities=18% Similarity=0.122 Sum_probs=71.6
Q ss_pred cEEEEEeccCCCCCCCCHHHHH---HHhccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---CC
Q psy5825 278 KVHIISGDISQPSLGISSHDQQ---FIQHHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC---SQ 344 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~---~l~~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~---~~ 344 (596)
++.++++|+++... -...++ .-+.++|+.||.||..... .....++++||.|+..+..+|... .+
T Consensus 64 ~v~~~~~Dvs~~~~--~~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~ 141 (282)
T KOG1205|consen 64 KVLVLQLDVSDEES--VKKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRN 141 (282)
T ss_pred ccEEEeCccCCHHH--HHHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcC
Confidence 59999999998653 111111 2346899999999986421 223458899999999999998641 23
Q ss_pred CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 345 LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 345 vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
-.+||.+||++-+-.. | +...|..||++-+.+..-..
T Consensus 142 ~GhIVvisSiaG~~~~----------P-----------------------------~~~~Y~ASK~Al~~f~etLR 178 (282)
T KOG1205|consen 142 DGHIVVISSIAGKMPL----------P-----------------------------FRSIYSASKHALEGFFETLR 178 (282)
T ss_pred CCeEEEEeccccccCC----------C-----------------------------cccccchHHHHHHHHHHHHH
Confidence 4689999998743210 0 22369999999998887665
|
|
| >KOG1610|consensus | Back alignment and domain information |
|---|
Probab=97.97 E-value=0.00025 Score=71.75 Aligned_cols=112 Identities=12% Similarity=0.180 Sum_probs=78.9
Q ss_pred cCcEEEEEeccCCCCCCCCHHHHHHHhc---------cccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHH
Q psy5825 276 QRKVHIISGDISQPSLGISSHDQQFIQH---------HIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 276 ~~rv~~v~GDl~~~~lGL~~~~~~~l~~---------~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~ 338 (596)
++|+..+.-|++++.. +..+.+ +.-.|||+||+..+. .+|...+++|+.||..+...
T Consensus 75 s~rl~t~~LDVT~~es------i~~a~~~V~~~l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~ 148 (322)
T KOG1610|consen 75 SPRLRTLQLDVTKPES------VKEAAQWVKKHLGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKA 148 (322)
T ss_pred CCcceeEeeccCCHHH------HHHHHHHHHHhcccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHH
Confidence 4789999999997753 555543 345999999965322 35667889999998877665
Q ss_pred HHhc--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 339 ATRC--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 339 a~~~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
...+ ..-.|+|++||..---.. | ...+|+.||++.|.+.
T Consensus 149 ~lpLlr~arGRvVnvsS~~GR~~~---------------------------------p------~~g~Y~~SK~aVeaf~ 189 (322)
T KOG1610|consen 149 FLPLLRRARGRVVNVSSVLGRVAL---------------------------------P------ALGPYCVSKFAVEAFS 189 (322)
T ss_pred HHHHHHhccCeEEEecccccCccC---------------------------------c------ccccchhhHHHHHHHH
Confidence 4321 134699999997531100 0 1246999999999877
Q ss_pred HHHh-----cCCCEEEecCCc
Q psy5825 417 EKYL-----YKLPLAMVRPSI 432 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~ 432 (596)
.-.. .|+.|.|+=||+
T Consensus 190 D~lR~EL~~fGV~VsiiePG~ 210 (322)
T KOG1610|consen 190 DSLRRELRPFGVKVSIIEPGF 210 (322)
T ss_pred HHHHHHHHhcCcEEEEeccCc
Confidence 5543 799999999993
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.93 E-value=0.00011 Score=76.47 Aligned_cols=75 Identities=13% Similarity=0.067 Sum_probs=52.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+||++.. .+..++ ..+|+|||+||.... ...+...+.+|+.|+..|++++..
T Consensus 47 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~~~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp 120 (308)
T PLN00015 47 DSYTVMHLDLASLD------SVRQFVDNFRRSGRPLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLD 120 (308)
T ss_pred CeEEEEEecCCCHH------HHHHHHHHHHhcCCCCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46888999999654 233333 358999999997421 123456889999998888777654
Q ss_pred c---CC--CceEEEecCcccc
Q psy5825 342 C---SQ--LKAILHVSTLYTH 357 (596)
Q Consensus 342 ~---~~--vkrfV~vSS~~v~ 357 (596)
. .+ ..+||++||+..+
T Consensus 121 ~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 121 DLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred HHHhCCCCCCEEEEEeccccc
Confidence 1 22 3689999998654
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=97.92 E-value=8.6e-05 Score=69.28 Aligned_cols=98 Identities=17% Similarity=0.198 Sum_probs=74.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|+|||||+.... ...+..++.+|+.+...+.+++..
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~- 124 (167)
T PF00106_consen 52 AKITFIECDLSDPE------SIRALIEEVIKRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLP- 124 (167)
T ss_dssp SEEEEEESETTSHH------HHHHHHHHHHHHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHH-
T ss_pred cccccccccccccc------cccccccccccccccccccccccccccccccccccchhhhhccccccceeeeeeehhee-
Confidence 68999999999653 344443 358999999998751 133456899999999999999988
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+...||++||....-... ....|+.||++.+.++..++
T Consensus 125 ~~~g~iv~~sS~~~~~~~~---------------------------------------~~~~Y~askaal~~~~~~la 163 (167)
T PF00106_consen 125 QGGGKIVNISSIAGVRGSP---------------------------------------GMSAYSASKAALRGLTQSLA 163 (167)
T ss_dssp HTTEEEEEEEEGGGTSSST---------------------------------------TBHHHHHHHHHHHHHHHHHH
T ss_pred ccccceEEecchhhccCCC---------------------------------------CChhHHHHHHHHHHHHHHHH
Confidence 5678999999987543210 22469999999999987764
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain | Back alignment and domain information |
|---|
Probab=97.84 E-value=0.00044 Score=66.02 Aligned_cols=136 Identities=15% Similarity=0.173 Sum_probs=85.9
Q ss_pred cCeEEEEeCCC-CcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc-------cccE
Q psy5825 236 VGGIYILLRSK-KNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH-------HIHV 307 (596)
Q Consensus 236 v~~V~~LvR~~-~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ 307 (596)
..+|+++.|.. ........+..+-.. ..+|.++.+|++++. ++..++. .++.
T Consensus 25 ~~~~il~~r~~~~~~~~~~~i~~l~~~--------------g~~v~~~~~Dv~d~~------~v~~~~~~~~~~~~~i~g 84 (181)
T PF08659_consen 25 ARRLILLGRSGAPSAEAEAAIRELESA--------------GARVEYVQCDVTDPE------AVAAALAQLRQRFGPIDG 84 (181)
T ss_dssp -SEEEEEESSGGGSTTHHHHHHHHHHT--------------T-EEEEEE--TTSHH------HHHHHHHTSHTTSS-EEE
T ss_pred CCEEEEeccCCCccHHHHHHHHHHHhC--------------CCceeeeccCccCHH------HHHHHHHHHHhccCCcce
Confidence 46899999973 222333333332211 157999999999654 4666653 4689
Q ss_pred EEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc-ccCCccccccccCCCCChHHHHH
Q psy5825 308 IIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAH 379 (596)
Q Consensus 308 ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~ 379 (596)
|||+|+.... ...+...+..-+.|+.+|.++... ..+..||++||++. +|...
T Consensus 85 Vih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~-~~l~~~i~~SSis~~~G~~g------------------ 145 (181)
T PF08659_consen 85 VIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALEN-RPLDFFILFSSISSLLGGPG------------------ 145 (181)
T ss_dssp EEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTT-TTTSEEEEEEEHHHHTT-TT------------------
T ss_pred eeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhc-CCCCeEEEECChhHhccCcc------------------
Confidence 9999997632 123445778899999999999987 68899999999875 44311
Q ss_pred HHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCc
Q psy5825 380 VMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSI 432 (596)
Q Consensus 380 ~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~ 432 (596)
...|+..-...+.+..... .|++++.+..+.
T Consensus 146 ----------------------q~~YaaAN~~lda~a~~~~~~g~~~~sI~wg~ 177 (181)
T PF08659_consen 146 ----------------------QSAYAAANAFLDALARQRRSRGLPAVSINWGA 177 (181)
T ss_dssp ----------------------BHHHHHHHHHHHHHHHHHHHTTSEEEEEEE-E
T ss_pred ----------------------hHhHHHHHHHHHHHHHHHHhCCCCEEEEEccc
Confidence 1458888888888887766 889988877543
|
It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B .... |
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00051 Score=68.82 Aligned_cols=117 Identities=21% Similarity=0.181 Sum_probs=75.7
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHH---hccccEEEEcCccCChhh-------hHHHHHHHHHHHHHHHHHHHH----hcC
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFI---QHHIHVIIHAAASLRFDE-------LIQDAFTLNIQATRELLDLAT----RCS 343 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l---~~~vd~ViH~AA~v~~~~-------~~~~~~~~NV~GT~~LL~~a~----~~~ 343 (596)
++.++.+|++++.- + ...++.+ ...+|++||+||...... ....+..+|+.+..+++.++. ...
T Consensus 50 ~~~~~~~Dv~d~~~-v-~~~~~~~~~~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~ 127 (246)
T PRK05599 50 SVHVLSFDAQDLDT-H-RELVKQTQELAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQT 127 (246)
T ss_pred ceEEEEcccCCHHH-H-HHHHHHHHHhcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcC
Confidence 57889999998653 0 1112222 246899999999753211 122456788888877765553 211
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
.-.+||++||.+.+-... ....|+.||+.-+.+++..+
T Consensus 128 ~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~la~el 168 (246)
T PRK05599 128 APAAIVAFSSIAGWRARR---------------------------------------ANYVYGSTKAGLDAFCQGLADSL 168 (246)
T ss_pred CCCEEEEEeccccccCCc---------------------------------------CCcchhhHHHHHHHHHHHHHHHh
Confidence 235899999976432100 12459999999888887655
Q ss_pred --cCCCEEEecCCcccc
Q psy5825 421 --YKLPLAMVRPSIVVS 435 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G 435 (596)
.|+.++.+-||.|..
T Consensus 169 ~~~~I~v~~v~PG~v~T 185 (246)
T PRK05599 169 HGSHVRLIIARPGFVIG 185 (246)
T ss_pred cCCCceEEEecCCcccc
Confidence 678888899888854
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00099 Score=71.67 Aligned_cols=58 Identities=14% Similarity=0.200 Sum_probs=44.8
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.+.++.+|++++. .+..++.++|++||+||..... ..+..++++|+.|+.++++++..
T Consensus 225 ~v~~v~~Dvsd~~------~v~~~l~~IDiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp 286 (406)
T PRK07424 225 PVKTLHWQVGQEA------ALAELLEKVDILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFT 286 (406)
T ss_pred CeEEEEeeCCCHH------HHHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4678889998643 4677788999999999864321 23456889999999999999864
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00058 Score=68.57 Aligned_cols=56 Identities=18% Similarity=0.127 Sum_probs=43.1
Q ss_pred EEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 280 HIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF----DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 280 ~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~----~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.+|+++.. ++...+..+|++||+||.... ...+...+++|+.|+.+|++++..
T Consensus 61 ~~~~~D~~~~~------~~~~~~~~iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 120 (245)
T PRK12367 61 EWIKWECGKEE------SLDKQLASLDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFED 120 (245)
T ss_pred eEEEeeCCCHH------HHHHhcCCCCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 56788998643 466677889999999997432 234566889999999999998865
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.00086 Score=66.47 Aligned_cols=112 Identities=13% Similarity=0.095 Sum_probs=74.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------c-cccEEEEcCccCCh----h----hhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------H-HIHVIIHAAASLRF----D----ELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~-~vd~ViH~AA~v~~----~----~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
..+..+..|++++. .+..++ . .+|++||+||.... . ..+...+.+|+.++..++..+.
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 127 (227)
T PRK08862 54 DNVYSFQLKDFSQE------SIRHLFDAIEQQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAA 127 (227)
T ss_pred CCeEEEEccCCCHH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 45777888988654 233332 3 68999999974321 1 1234466788888877766654
Q ss_pred h-c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 341 R-C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 341 ~-~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
. + .....+|++||...+. ...+|+.||+.-+.+.
T Consensus 128 ~~m~~~~~~g~Iv~isS~~~~~------------------------------------------~~~~Y~asKaal~~~~ 165 (227)
T PRK08862 128 ERMRKRNKKGVIVNVISHDDHQ------------------------------------------DLTGVESSNALVSGFT 165 (227)
T ss_pred HHHHhcCCCceEEEEecCCCCC------------------------------------------CcchhHHHHHHHHHHH
Confidence 2 1 1235899999854221 1135999999988888
Q ss_pred HHHh-----cCCCEEEecCCccccC
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~ 436 (596)
...+ .|+.+..+.||.|-.+
T Consensus 166 ~~la~el~~~~Irvn~v~PG~i~t~ 190 (227)
T PRK08862 166 HSWAKELTPFNIRVGGVVPSIFSAN 190 (227)
T ss_pred HHHHHHHhhcCcEEEEEecCcCcCC
Confidence 6654 6899999999988553
|
|
| >KOG1203|consensus | Back alignment and domain information |
|---|
Probab=97.55 E-value=0.00077 Score=71.45 Aligned_cols=96 Identities=18% Similarity=0.296 Sum_probs=63.8
Q ss_pred cccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhc
Q psy5825 304 HIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQT 383 (596)
Q Consensus 304 ~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~ 383 (596)
.+.+|+-|++-..-..+...-+.+-..|+.||+++|.. .++++||++|++...-... + .|
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~-aGvk~~vlv~si~~~~~~~-------~---~~--------- 212 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKK-AGVKRVVLVGSIGGTKFNQ-------P---PN--------- 212 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHH-hCCceEEEEEeecCcccCC-------C---ch---------
Confidence 34577777765443221122346778899999999988 6999999998876532110 0 00
Q ss_pred CChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCcccc
Q psy5825 384 TNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVS 435 (596)
Q Consensus 384 ~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G 435 (596)
. .. ....+-.+|+.+|.++.+ .|++++|+|++...-
T Consensus 213 -----~-------~~--~~~~~~~~k~~~e~~~~~--Sgl~ytiIR~g~~~~ 248 (411)
T KOG1203|consen 213 -----I-------LL--LNGLVLKAKLKAEKFLQD--SGLPYTIIRPGGLEQ 248 (411)
T ss_pred -----h-------hh--hhhhhhHHHHhHHHHHHh--cCCCcEEEecccccc
Confidence 0 00 113477889999999876 699999999987643
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0019 Score=67.06 Aligned_cols=116 Identities=9% Similarity=0.038 Sum_probs=77.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcC-ccC-------Chh----hhHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAA-ASL-------RFD----ELIQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~A-A~v-------~~~----~~~~~~~~~NV~GT~~LL~ 337 (596)
.++.++.+|++++. ++..++ ..+|++||+| +.. .+. ..+...+.+|+.|+..++.
T Consensus 67 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~ 140 (305)
T PRK08303 67 GRGIAVQVDHLVPE------QVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSH 140 (305)
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHH
Confidence 46788999999754 344333 3589999999 632 111 1234577899999999888
Q ss_pred HHHhc---CCCceEEEecCcccc-cCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHH
Q psy5825 338 LATRC---SQLKAILHVSTLYTH-SYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413 (596)
Q Consensus 338 ~a~~~---~~vkrfV~vSS~~v~-g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE 413 (596)
++... .+-.+||++||.... +... + . ....|+.||+...
T Consensus 141 ~~lp~m~~~~~g~IV~isS~~~~~~~~~------~------------------------------~-~~~~Y~asKaal~ 183 (305)
T PRK08303 141 FALPLLIRRPGGLVVEITDGTAEYNATH------Y------------------------------R-LSVFYDLAKTSVN 183 (305)
T ss_pred HHHHHhhhCCCcEEEEECCccccccCcC------C------------------------------C-CcchhHHHHHHHH
Confidence 87641 223589999986432 1100 0 0 1135999999999
Q ss_pred HHHHHHh-----cCCCEEEecCCcccc
Q psy5825 414 SVVEKYL-----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 414 ~lv~~~~-----~gl~~~IlRp~~V~G 435 (596)
.+.+..+ .|+.+..+.||.|-.
T Consensus 184 ~lt~~La~el~~~gIrVn~v~PG~v~T 210 (305)
T PRK08303 184 RLAFSLAHELAPHGATAVALTPGWLRS 210 (305)
T ss_pred HHHHHHHHHhhhcCcEEEEecCCcccc
Confidence 8887654 679999999988743
|
|
| >KOG1201|consensus | Back alignment and domain information |
|---|
Probab=97.52 E-value=0.002 Score=65.08 Aligned_cols=187 Identities=14% Similarity=0.115 Sum_probs=113.4
Q ss_pred CcCeEEEEeCCCCcccHHHHHHHHhhh----hhHHHhhhhhhh---hhc--CcEEEEEeccCCCCCCCCHHHHHHHh---
Q psy5825 235 EVGGIYILLRSKKNKTVQERLAEQFKD----ELFDRLKNEQAD---ILQ--RKVHIISGDISQPSLGISSHDQQFIQ--- 302 (596)
Q Consensus 235 ~v~~V~~LvR~~~~~~~~~Rl~~~~~~----~~~~~l~~~~~~---~~~--~rv~~v~GDl~~~~lGL~~~~~~~l~--- 302 (596)
+|..=.||+.+.++.-+++-..++.+. .+||.......+ ... .++..+.+|+++.. ++..++
T Consensus 35 ~v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~e------ei~~~a~~V 108 (300)
T KOG1201|consen 35 SVSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDRE------EIYRLAKKV 108 (300)
T ss_pred hccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHH------HHHHHHHHH
Confidence 444456788876544454444444442 234432222111 111 25889999999753 344443
Q ss_pred ----ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHH----HhcCCCceEEEecCcccccCCccccccc
Q psy5825 303 ----HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLA----TRCSQLKAILHVSTLYTHSYREDIQEEF 367 (596)
Q Consensus 303 ----~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a----~~~~~vkrfV~vSS~~v~g~~~~i~E~~ 367 (596)
..||++|+.||.+... ...+..+++|+.|......+- .+ .+-.++|-++|+.-+....
T Consensus 109 k~e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~-~~~GHIV~IaS~aG~~g~~------ 181 (300)
T KOG1201|consen 109 KKEVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLE-NNNGHIVTIASVAGLFGPA------ 181 (300)
T ss_pred HHhcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHh-cCCceEEEehhhhcccCCc------
Confidence 3589999999987532 234568899999977655554 33 3556899998876432110
Q ss_pred cCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH----Hh----cCCCEEEecCCccccCCCC
Q psy5825 368 YPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK----YL----YKLPLAMVRPSIVVSTWKE 439 (596)
Q Consensus 368 ~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~----~~----~gl~~~IlRp~~V~G~~~~ 439 (596)
....|+.||+++.-+-.. .. .|+.++.+-|+.+=
T Consensus 182 ---------------------------------gl~~YcaSK~a~vGfhesL~~EL~~~~~~~IktTlv~P~~i~----- 223 (300)
T KOG1201|consen 182 ---------------------------------GLADYCASKFAAVGFHESLSMELRALGKDGIKTTLVCPYFIN----- 223 (300)
T ss_pred ---------------------------------cchhhhhhHHHHHHHHHHHHHHHHhcCCCCeeEEEEeeeecc-----
Confidence 113599999998544333 22 67888888887771
Q ss_pred CccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 440 PIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 440 p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+| +..| .......+.++..+.||+.|+.++...
T Consensus 224 --Tg--------------mf~~-----~~~~~~l~P~L~p~~va~~Iv~ai~~n 256 (300)
T KOG1201|consen 224 --TG--------------MFDG-----ATPFPTLAPLLEPEYVAKRIVEAILTN 256 (300)
T ss_pred --cc--------------ccCC-----CCCCccccCCCCHHHHHHHHHHHHHcC
Confidence 11 1111 011234567889999999999998764
|
|
| >KOG1204|consensus | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0027 Score=61.45 Aligned_cols=118 Identities=18% Similarity=0.135 Sum_probs=79.9
Q ss_pred CcEEEEEeccCCCCCCCCH-----HHHHHHhc----cccEEEEcCccCCh----------hhhHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISS-----HDQQFIQH----HIHVIIHAAASLRF----------DELIQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~-----~~~~~l~~----~vd~ViH~AA~v~~----------~~~~~~~~~~NV~GT~~LL~ 337 (596)
..+.+..||.....-|.-. .++..+.. .-|+|||.||.... ...+..+|+.|+.+...|..
T Consensus 46 ~~L~v~~gd~~v~~~g~~~e~~~l~al~e~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~ 125 (253)
T KOG1204|consen 46 EGLKVAYGDDFVHVVGDITEEQLLGALREAPRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQ 125 (253)
T ss_pred cceEEEecCCcceechHHHHHHHHHHHHhhhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHH
Confidence 5677777766544332211 11222221 36999999997531 12345699999999999998
Q ss_pred HHHhc-CC---CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHH
Q psy5825 338 LATRC-SQ---LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413 (596)
Q Consensus 338 ~a~~~-~~---vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE 413 (596)
.|... .+ .+-+|++||.++.-+.. ....|+.+|++-+
T Consensus 126 ~~l~~lk~~p~~~~vVnvSS~aav~p~~---------------------------------------~wa~yc~~KaAr~ 166 (253)
T KOG1204|consen 126 WALPKLKKSPVNGNVVNVSSLAAVRPFS---------------------------------------SWAAYCSSKAARN 166 (253)
T ss_pred HHHHHhcCCCccCeEEEecchhhhcccc---------------------------------------HHHHhhhhHHHHH
Confidence 88752 22 26789999987654210 1135999999999
Q ss_pred HHHHHHh---c-CCCEEEecCCcc
Q psy5825 414 SVVEKYL---Y-KLPLAMVRPSIV 433 (596)
Q Consensus 414 ~lv~~~~---~-gl~~~IlRp~~V 433 (596)
++++..+ + ++.+..++||.|
T Consensus 167 m~f~~lA~EEp~~v~vl~~aPGvv 190 (253)
T KOG1204|consen 167 MYFMVLASEEPFDVRVLNYAPGVV 190 (253)
T ss_pred HHHHHHhhcCccceeEEEccCCcc
Confidence 9999887 4 788899999988
|
|
| >TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.0017 Score=83.82 Aligned_cols=113 Identities=13% Similarity=0.067 Sum_probs=83.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRCS 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~~ 343 (596)
.++.++.+|+++..- +..++. .+|+|||+||.... ...+...+.+||.|+.+|+.++.. .
T Consensus 2094 ~~v~y~~~DVtD~~a------v~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~~nv~G~~~Ll~al~~-~ 2166 (2582)
T TIGR02813 2094 ASAEYASADVTNSVS------VAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYGTKVDGLLSLLAALNA-E 2166 (2582)
T ss_pred CcEEEEEccCCCHHH------HHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH-h
Confidence 578899999997542 433332 48999999997532 134566899999999999999876 3
Q ss_pred CCceEEEecCcccc-cCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 344 QLKAILHVSTLYTH-SYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~-g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
..++||++||+..+ |.. ....|+.+|..-..+...+.
T Consensus 2167 ~~~~IV~~SSvag~~G~~----------------------------------------gqs~YaaAkaaL~~la~~la~~ 2206 (2582)
T TIGR02813 2167 NIKLLALFSSAAGFYGNT----------------------------------------GQSDYAMSNDILNKAALQLKAL 2206 (2582)
T ss_pred CCCeEEEEechhhcCCCC----------------------------------------CcHHHHHHHHHHHHHHHHHHHH
Confidence 56789999998653 321 11359999998888777665
Q ss_pred -cCCCEEEecCCccccC
Q psy5825 421 -YKLPLAMVRPSIVVST 436 (596)
Q Consensus 421 -~gl~~~IlRp~~V~G~ 436 (596)
.++.++.+.||.+-|.
T Consensus 2207 ~~~irV~sI~wG~wdtg 2223 (2582)
T TIGR02813 2207 NPSAKVMSFNWGPWDGG 2223 (2582)
T ss_pred cCCcEEEEEECCeecCC
Confidence 4678888888877554
|
Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD. |
| >KOG1208|consensus | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0028 Score=65.82 Aligned_cols=128 Identities=19% Similarity=0.219 Sum_probs=83.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-----hhHHHHHHHHHHHHHHHHHHHHhc--
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-----ELIQDAFTLNIQATRELLDLATRC-- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-----~~~~~~~~~NV~GT~~LL~~a~~~-- 342 (596)
..|.++..||++... +..++ ...|+.|++||..... +.++..+.+|+.|...|.++....
T Consensus 86 ~~i~~~~lDLssl~S------V~~fa~~~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk 159 (314)
T KOG1208|consen 86 QKIRVIQLDLSSLKS------VRKFAEEFKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLK 159 (314)
T ss_pred CceEEEECCCCCHHH------HHHHHHHHHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHh
Confidence 678999999997543 44443 3479999999986422 235668899999988777766431
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....|+|++||+.- +....+. .++ .... .... ....|++||.+--.+..+.+
T Consensus 160 ~s~~~RIV~vsS~~~-~~~~~~~------~l~------------~~~~----~~~~---~~~~Y~~SKla~~l~~~eL~k 213 (314)
T KOG1208|consen 160 RSAPSRIVNVSSILG-GGKIDLK------DLS------------GEKA----KLYS---SDAAYALSKLANVLLANELAK 213 (314)
T ss_pred hCCCCCEEEEcCccc-cCccchh------hcc------------chhc----cCcc---chhHHHHhHHHHHHHHHHHHH
Confidence 22379999999875 2111000 000 0000 0000 11259999999988888877
Q ss_pred ---cCCCEEEecCCccccC
Q psy5825 421 ---YKLPLAMVRPSIVVST 436 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~ 436 (596)
.|+.+..+.||.|...
T Consensus 214 ~l~~~V~~~~~hPG~v~t~ 232 (314)
T KOG1208|consen 214 RLKKGVTTYSVHPGVVKTT 232 (314)
T ss_pred HhhcCceEEEECCCccccc
Confidence 4788999999999765
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0034 Score=65.06 Aligned_cols=95 Identities=18% Similarity=0.139 Sum_probs=66.9
Q ss_pred cccEEEEcCccCC-----hh----hhHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEecCcccccCCccccccccCCCCC
Q psy5825 304 HIHVIIHAAASLR-----FD----ELIQDAFTLNIQATRELLDLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFS 373 (596)
Q Consensus 304 ~vd~ViH~AA~v~-----~~----~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~ 373 (596)
.+|++||+||... +. ..+...+++|+.|...+++++... ..-.++|++||+.......
T Consensus 120 ~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~l~~~~~p~m~~~G~II~isS~a~~~~~p------------ 187 (303)
T PLN02730 120 SIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVSLLQHFGPIMNPGGASISLTYIASERIIP------------ 187 (303)
T ss_pred CCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEechhhcCCCC------------
Confidence 4899999996421 11 245568899999999999888752 1226899999976432100
Q ss_pred hHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh------cCCCEEEecCCccccC
Q psy5825 374 YEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL------YKLPLAMVRPSIVVST 436 (596)
Q Consensus 374 ~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~------~gl~~~IlRp~~V~G~ 436 (596)
. +...|+.||+.-+.+.+.++ .|+.++.+-||.|-.+
T Consensus 188 -------------------------~-~~~~Y~asKaAl~~l~~~la~El~~~~gIrVn~V~PG~v~T~ 230 (303)
T PLN02730 188 -------------------------G-YGGGMSSAKAALESDTRVLAFEAGRKYKIRVNTISAGPLGSR 230 (303)
T ss_pred -------------------------C-CchhhHHHHHHHHHHHHHHHHHhCcCCCeEEEEEeeCCccCc
Confidence 0 11259999999999887766 2688999999888543
|
|
| >KOG1611|consensus | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.015 Score=56.32 Aligned_cols=150 Identities=18% Similarity=0.184 Sum_probs=88.4
Q ss_pred CcEEEEEeccCCCCC-CCCHHHHHHH--hccccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHhc---
Q psy5825 277 RKVHIISGDISQPSL-GISSHDQQFI--QHHIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATRC--- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~l-GL~~~~~~~l--~~~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~~--- 342 (596)
+||++|+-|++.... +=...++..+ .++++++|++||..... ..+-..+++|+.|+..+.+.+..+
T Consensus 54 ~rvHii~Ldvt~deS~~~~~~~V~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~lPLLkk 133 (249)
T KOG1611|consen 54 SRVHIIQLDVTCDESIDNFVQEVEKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFLPLLKK 133 (249)
T ss_pred CceEEEEEecccHHHHHHHHHHHHhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHHHHHHH
Confidence 899999999996543 0011122223 34678999999975311 123357799999988777765421
Q ss_pred C-----------CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHH
Q psy5825 343 S-----------QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAI 411 (596)
Q Consensus 343 ~-----------~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~ 411 (596)
+ ....+|++||....-.. .++ . ...+|..||.+
T Consensus 134 aas~~~gd~~s~~raaIinisS~~~s~~~------~~~-----------------------------~-~~~AYrmSKaA 177 (249)
T KOG1611|consen 134 AASKVSGDGLSVSRAAIINISSSAGSIGG------FRP-----------------------------G-GLSAYRMSKAA 177 (249)
T ss_pred HhhcccCCcccccceeEEEeeccccccCC------CCC-----------------------------c-chhhhHhhHHH
Confidence 1 22378888886542110 000 0 12569999999
Q ss_pred HHHHHHHHh---cC--CCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHH
Q psy5825 412 GESVVEKYL---YK--LPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMM 486 (596)
Q Consensus 412 aE~lv~~~~---~g--l~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~ai 486 (596)
--...+... .. +=++.+-||+| ....| +.-..+.|+.-+..|
T Consensus 178 lN~f~ksls~dL~~~~ilv~sihPGwV------------~TDMg---------------------g~~a~ltveeSts~l 224 (249)
T KOG1611|consen 178 LNMFAKSLSVDLKDDHILVVSIHPGWV------------QTDMG---------------------GKKAALTVEESTSKL 224 (249)
T ss_pred HHHHHHHhhhhhcCCcEEEEEecCCeE------------EcCCC---------------------CCCcccchhhhHHHH
Confidence 988887766 33 33444444444 32111 012346677788888
Q ss_pred HHHHHhhhc
Q psy5825 487 LGVVWKTAL 495 (596)
Q Consensus 487 i~~~~~~~~ 495 (596)
+..+.....
T Consensus 225 ~~~i~kL~~ 233 (249)
T KOG1611|consen 225 LASINKLKN 233 (249)
T ss_pred HHHHHhcCc
Confidence 888776543
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0039 Score=62.23 Aligned_cols=113 Identities=14% Similarity=0.121 Sum_probs=77.5
Q ss_pred cEEEEEeccCC-CCCCCCHHHHHHH---hccccEEEEcCccCCh----h----hhHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy5825 278 KVHIISGDISQ-PSLGISSHDQQFI---QHHIHVIIHAAASLRF----D----ELIQDAFTLNIQATRELLDLATRCSQL 345 (596)
Q Consensus 278 rv~~v~GDl~~-~~lGL~~~~~~~l---~~~vd~ViH~AA~v~~----~----~~~~~~~~~NV~GT~~LL~~a~~~~~v 345 (596)
.+.++..|+++ ... -...+..+ +..+|++||+|+.... . ..+...+.+|+.|...+.+++.. ..
T Consensus 58 ~~~~~~~Dvs~~~~~--v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~--~~ 133 (251)
T COG1028 58 RAAAVAADVSDDEES--VEALVAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALP--LM 133 (251)
T ss_pred cEEEEEecCCCCHHH--HHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHH--hh
Confidence 57788899997 221 00112222 2348999999997532 1 23456889999999999985543 33
Q ss_pred c--eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCC-CchHHHHHHHHHHHHHHHh--
Q psy5825 346 K--AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIY-NNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 346 k--rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~-~~~Y~~SK~~aE~lv~~~~-- 420 (596)
. +||++||.... ... + ...|+.||++...+...+.
T Consensus 134 ~~~~Iv~isS~~~~-~~~---------------------------------------~~~~~Y~~sK~al~~~~~~l~~e 173 (251)
T COG1028 134 KKQRIVNISSVAGL-GGP---------------------------------------PGQAAYAASKAALIGLTKALALE 173 (251)
T ss_pred hhCeEEEECCchhc-CCC---------------------------------------CCcchHHHHHHHHHHHHHHHHHH
Confidence 3 99999998764 311 1 1359999999988887665
Q ss_pred ---cCCCEEEecCCccc
Q psy5825 421 ---YKLPLAMVRPSIVV 434 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~ 434 (596)
.|+.++.+-||.|-
T Consensus 174 ~~~~gi~v~~v~PG~~~ 190 (251)
T COG1028 174 LAPRGIRVNAVAPGYID 190 (251)
T ss_pred HhhhCcEEEEEEeccCC
Confidence 67899999999553
|
|
| >KOG4364|consensus | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.00042 Score=75.25 Aligned_cols=11 Identities=18% Similarity=0.335 Sum_probs=7.7
Q ss_pred HHHHHHHHHHh
Q psy5825 331 ATRELLDLATR 341 (596)
Q Consensus 331 GT~~LL~~a~~ 341 (596)
+-..||.||..
T Consensus 479 mKaKlLqF~~N 489 (811)
T KOG4364|consen 479 MKAKLLQFDKN 489 (811)
T ss_pred hHHHHhhhccc
Confidence 44568888876
|
|
| >KOG0725|consensus | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.0085 Score=61.01 Aligned_cols=123 Identities=18% Similarity=0.208 Sum_probs=84.5
Q ss_pred CcEEEEEeccCCCCC--CCCHHHHHHHhccccEEEEcCccCChh--------hhHHHHHHHHHHH-HHHHHHHHHhc---
Q psy5825 277 RKVHIISGDISQPSL--GISSHDQQFIQHHIHVIIHAAASLRFD--------ELIQDAFTLNIQA-TRELLDLATRC--- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~l--GL~~~~~~~l~~~vd~ViH~AA~v~~~--------~~~~~~~~~NV~G-T~~LL~~a~~~--- 342 (596)
.++..+.+|+++..- .|-.......+..+|++|++|+..... ..++..+.+|+.| +.++..+|..+
T Consensus 60 ~~~~~~~~Dv~~~~~~~~l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~~ 139 (270)
T KOG0725|consen 60 GKVLAIVCDVSKEVDVEKLVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLKK 139 (270)
T ss_pred CeeEEEECcCCCHHHHHHHHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHHh
Confidence 568999999985431 111122222244689999999986532 2355688999995 66666666542
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
.+...++++||+..+.... . .+..|+.||..-+++.+..+
T Consensus 140 ~~gg~I~~~ss~~~~~~~~------------------------------------~--~~~~Y~~sK~al~~ltr~lA~E 181 (270)
T KOG0725|consen 140 SKGGSIVNISSVAGVGPGP------------------------------------G--SGVAYGVSKAALLQLTRSLAKE 181 (270)
T ss_pred cCCceEEEEeccccccCCC------------------------------------C--CcccchhHHHHHHHHHHHHHHH
Confidence 2445788888876543210 0 11469999999999998876
Q ss_pred ---cCCCEEEecCCccccCC
Q psy5825 421 ---YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~ 437 (596)
.|+++..+=||.|..+.
T Consensus 182 l~~~gIRvN~v~PG~i~T~~ 201 (270)
T KOG0725|consen 182 LAKHGIRVNSVSPGLVKTSL 201 (270)
T ss_pred HhhcCcEEEEeecCcEeCCc
Confidence 78999999999997764
|
|
| >KOG1210|consensus | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.011 Score=60.10 Aligned_cols=157 Identities=15% Similarity=0.198 Sum_probs=90.2
Q ss_pred EEEEEeccCCCCCCCC--HHHHHHHhccccEEEEcCccCC---hh----hhHHHHHHHHHHHHHHHHHHHHhc----CCC
Q psy5825 279 VHIISGDISQPSLGIS--SHDQQFIQHHIHVIIHAAASLR---FD----ELIQDAFTLNIQATRELLDLATRC----SQL 345 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~--~~~~~~l~~~vd~ViH~AA~v~---~~----~~~~~~~~~NV~GT~~LL~~a~~~----~~v 345 (596)
|.+..+|+.+-+- .+ ...++.+.-.+|.+||||+..- |. ...+.++++|..||.|++.++... .+.
T Consensus 86 v~~~S~d~~~Y~~-v~~~~~~l~~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~ 164 (331)
T KOG1210|consen 86 VSYKSVDVIDYDS-VSKVIEELRDLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHL 164 (331)
T ss_pred eeEeccccccHHH-HHHHHhhhhhccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccC
Confidence 6688899854221 00 0111222235799999999742 11 223458899999999999988651 123
Q ss_pred ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH----HHHh-
Q psy5825 346 KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV----EKYL- 420 (596)
Q Consensus 346 krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv----~~~~- 420 (596)
.+|+.+||..+.-.. . ..+.|..+|++---|. .+..
T Consensus 165 g~I~~vsS~~a~~~i------------------------------------~---GysaYs~sK~alrgLa~~l~qE~i~ 205 (331)
T KOG1210|consen 165 GRIILVSSQLAMLGI------------------------------------Y---GYSAYSPSKFALRGLAEALRQELIK 205 (331)
T ss_pred cEEEEehhhhhhcCc------------------------------------c---cccccccHHHHHHHHHHHHHHHHhh
Confidence 388888887542210 0 1144777776554444 3333
Q ss_pred cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 421 YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 421 ~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+|+.++.+-|+.+--+ |+... +-....... .+ ...-+.+.-+++|.+++.-+...
T Consensus 206 ~~v~Vt~~~P~~~~tp------GfE~E-n~tkP~~t~-------ii----~g~ss~~~~e~~a~~~~~~~~rg 260 (331)
T KOG1210|consen 206 YGVHVTLYYPPDTLTP------GFERE-NKTKPEETK-------II----EGGSSVIKCEEMAKAIVKGMKRG 260 (331)
T ss_pred cceEEEEEcCCCCCCC------ccccc-cccCchhee-------ee----cCCCCCcCHHHHHHHHHhHHhhc
Confidence 7888888888877554 32211 100011111 11 22335589999999998887653
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.007 Score=62.64 Aligned_cols=96 Identities=18% Similarity=0.153 Sum_probs=66.7
Q ss_pred ccccEEEEcCccCC-----hh----hhHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEecCcccccCCccccccccCCCC
Q psy5825 303 HHIHVIIHAAASLR-----FD----ELIQDAFTLNIQATRELLDLATR-CSQLKAILHVSTLYTHSYREDIQEEFYPPLF 372 (596)
Q Consensus 303 ~~vd~ViH~AA~v~-----~~----~~~~~~~~~NV~GT~~LL~~a~~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~ 372 (596)
..+|++||+||... +. ..+...+++|+.|+.++++++.. +..-.++|++||+...... |
T Consensus 118 G~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~l~~a~~p~m~~~G~ii~iss~~~~~~~--------p--- 186 (299)
T PRK06300 118 GHIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVSLLSHFGPIMNPGGSTISLTYLASMRAV--------P--- 186 (299)
T ss_pred CCCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCeEEEEeehhhcCcC--------C---
Confidence 35899999997531 11 23456789999999999999875 2222478888876542210 0
Q ss_pred ChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----c-CCCEEEecCCccccC
Q psy5825 373 SYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----Y-KLPLAMVRPSIVVST 436 (596)
Q Consensus 373 ~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~-gl~~~IlRp~~V~G~ 436 (596)
+ +...|+.||+.-+.+++.++ . |+.+..+-||.|--+
T Consensus 187 -------------------------~--~~~~Y~asKaAl~~lt~~la~el~~~~gIrVn~V~PG~v~T~ 229 (299)
T PRK06300 187 -------------------------G--YGGGMSSAKAALESDTKVLAWEAGRRWGIRVNTISAGPLASR 229 (299)
T ss_pred -------------------------C--ccHHHHHHHHHHHHHHHHHHHHhCCCCCeEEEEEEeCCccCh
Confidence 0 11259999999998887665 2 789999999988443
|
|
| >KOG4364|consensus | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.0018 Score=70.57 Aligned_cols=8 Identities=0% Similarity=-0.193 Sum_probs=3.3
Q ss_pred ceEeecCC
Q psy5825 463 IHTFYAKH 470 (596)
Q Consensus 463 ~~~~~~~~ 470 (596)
++...|+.
T Consensus 661 ~pl~hgn~ 668 (811)
T KOG4364|consen 661 FPLSHGNE 668 (811)
T ss_pred hhhhcccc
Confidence 34444443
|
|
| >KOG1200|consensus | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.035 Score=52.64 Aligned_cols=169 Identities=17% Similarity=0.163 Sum_probs=99.3
Q ss_pred EEEEeccCCCCCCCCHHHHHHH-------hccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc---
Q psy5825 280 HIISGDISQPSLGISSHDQQFI-------QHHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC--- 342 (596)
Q Consensus 280 ~~v~GDl~~~~lGL~~~~~~~l-------~~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~--- 342 (596)
..+.+|++++.. .+.+ +..++++++||+++.- ...++..+.+|+.|+..+.++|.+.
T Consensus 65 ~aF~~DVS~a~~------v~~~l~e~~k~~g~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~ 138 (256)
T KOG1200|consen 65 SAFSCDVSKAHD------VQNTLEEMEKSLGTPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVM 138 (256)
T ss_pred ceeeeccCcHHH------HHHHHHHHHHhcCCCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHH
Confidence 356788887653 3332 2357999999998752 2346678899999999998888652
Q ss_pred --CCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 --SQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 --~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+.-++|.+||+-- .|+.. ..-|. .. -...-++||.+|-.+.+
T Consensus 139 ~~~~~~sIiNvsSIVGkiGN~G---QtnYA------------------------As-----K~GvIgftktaArEla~-- 184 (256)
T KOG1200|consen 139 NQQQGLSIINVSSIVGKIGNFG---QTNYA------------------------AS-----KGGVIGFTKTAARELAR-- 184 (256)
T ss_pred hcCCCceEEeehhhhccccccc---chhhh------------------------hh-----cCceeeeeHHHHHHHhh--
Confidence 22338999999742 23211 00000 00 00124556666665544
Q ss_pred hcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCC
Q psy5825 420 LYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGH 499 (596)
Q Consensus 420 ~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~ 499 (596)
.++++.++-||+|-.|... ..|..++-. +.+.+ |- --+--..++|+.++.++-....
T Consensus 185 -knIrvN~VlPGFI~tpMT~---------~mp~~v~~k-i~~~i---Pm-----gr~G~~EevA~~V~fLAS~~ss---- 241 (256)
T KOG1200|consen 185 -KNIRVNVVLPGFIATPMTE---------AMPPKVLDK-ILGMI---PM-----GRLGEAEEVANLVLFLASDASS---- 241 (256)
T ss_pred -cCceEeEeccccccChhhh---------hcCHHHHHH-HHccC---Cc-----cccCCHHHHHHHHHHHhccccc----
Confidence 5899999999999665432 122233333 22332 21 1123457889888888733221
Q ss_pred CCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 500 VAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 500 ~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
+-.|..+.++++
T Consensus 242 ------------YiTG~t~evtGG 253 (256)
T KOG1200|consen 242 ------------YITGTTLEVTGG 253 (256)
T ss_pred ------------cccceeEEEecc
Confidence 135777777765
|
|
| >KOG1207|consensus | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.0052 Score=56.94 Aligned_cols=156 Identities=19% Similarity=0.200 Sum_probs=97.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCC---hh----hhHHHHHHHHHHHHHHHHHHHHhc----
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLR---FD----ELIQDAFTLNIQATRELLDLATRC---- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~---~~----~~~~~~~~~NV~GT~~LL~~a~~~---- 342 (596)
.-|+.+.|||+.-. .+..++. .+|..++.||..- |. .+++..+++|+.+..++.++..+.
T Consensus 53 ~~I~Pi~~Dls~we------a~~~~l~~v~pidgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~var~lv~R 126 (245)
T KOG1207|consen 53 SLIIPIVGDLSAWE------ALFKLLVPVFPIDGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQLVARNLVDR 126 (245)
T ss_pred cceeeeEecccHHH------HHHHhhcccCchhhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHHHHHhhhhc
Confidence 45899999998522 1333332 3688999998642 21 233446788999998888875431
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
.-...+|.+||.+..-... ..+.|..||.+-..+-.-.+
T Consensus 127 ~~~GaIVNvSSqas~R~~~---------------------------------------nHtvYcatKaALDmlTk~lAlE 167 (245)
T KOG1207|consen 127 QIKGAIVNVSSQASIRPLD---------------------------------------NHTVYCATKAALDMLTKCLALE 167 (245)
T ss_pred cCCceEEEecchhcccccC---------------------------------------CceEEeecHHHHHHHHHHHHHh
Confidence 1223699999987532100 22569999999888766554
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
..+++..+.|..|.-..- ...|.|... ..-++..+|. --|.-||.|++|++.++-..
T Consensus 168 LGp~kIRVNsVNPTVVmT~MG--~dnWSDP~K---------~k~mL~riPl-----~rFaEV~eVVnA~lfLLSd~ 227 (245)
T KOG1207|consen 168 LGPQKIRVNSVNPTVVMTDMG--RDNWSDPDK---------KKKMLDRIPL-----KRFAEVDEVVNAVLFLLSDN 227 (245)
T ss_pred hCcceeEeeccCCeEEEeccc--ccccCCchh---------ccchhhhCch-----hhhhHHHHHHhhheeeeecC
Confidence 668899999998876531 223544321 0111112222 24778999999998887543
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.02 E-value=0.23 Score=46.83 Aligned_cols=160 Identities=16% Similarity=0.079 Sum_probs=95.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
+.+.++++||.++.. +...+.+.|+||..-+... .... ...+.....|+.+... .++.|++.+..++.
T Consensus 41 ~~~~i~q~Difd~~~------~a~~l~g~DaVIsA~~~~~--~~~~---~~~~k~~~~li~~l~~-agv~RllVVGGAGS 108 (211)
T COG2910 41 QGVTILQKDIFDLTS------LASDLAGHDAVISAFGAGA--SDND---ELHSKSIEALIEALKG-AGVPRLLVVGGAGS 108 (211)
T ss_pred ccceeecccccChhh------hHhhhcCCceEEEeccCCC--CChh---HHHHHHHHHHHHHHhh-cCCeeEEEEcCccc
Confidence 567899999998764 6677889999998644321 1111 1123336777777777 68899998877665
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCC-chHHHHHHHHHHHHHHHh-cCCCEEEecCCccc
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYN-NSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVV 434 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~-~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~ 434 (596)
.- ++|... .++ .|. +| -.|...+..||.|=.--. ..|.++.+-|+..+
T Consensus 109 L~----id~g~r-------------------LvD--~p~-----fP~ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f 158 (211)
T COG2910 109 LE----IDEGTR-------------------LVD--TPD-----FPAEYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFF 158 (211)
T ss_pred eE----EcCCce-------------------eec--CCC-----CchhHHHHHHHHHHHHHHHhhccCcceEEeCcHHhc
Confidence 32 111100 000 010 22 347888888886544333 56999999999887
Q ss_pred cCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 435 STWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 435 G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
-|... +| + + ..|.-..+. ....-.+|...|.|-||+.-++.+..
T Consensus 159 ~PGer--Tg---~-y---------rlggD~ll~--n~~G~SrIS~aDYAiA~lDe~E~~~h 202 (211)
T COG2910 159 EPGER--TG---N-Y---------RLGGDQLLV--NAKGESRISYADYAIAVLDELEKPQH 202 (211)
T ss_pred CCccc--cC---c-e---------EeccceEEE--cCCCceeeeHHHHHHHHHHHHhcccc
Confidence 76332 22 1 1 111111111 12334678888888899888877543
|
|
| >KOG1209|consensus | Back alignment and domain information |
|---|
Probab=95.90 E-value=0.032 Score=53.56 Aligned_cols=112 Identities=13% Similarity=0.130 Sum_probs=75.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--------ccccEEEEcCccCCh----h---hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--------HHIHVIIHAAASLRF----D---ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--------~~vd~ViH~AA~v~~----~---~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.+..-|+++++- +..+. ...|+.|+.||..-. + ...+..+.+||.|..++.++...
T Consensus 52 ~gl~~~kLDV~~~~~------V~~v~~evr~~~~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h 125 (289)
T KOG1209|consen 52 FGLKPYKLDVSKPEE------VVTVSGEVRANPDGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSH 125 (289)
T ss_pred hCCeeEEeccCChHH------HHHHHHHHhhCCCCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHH
Confidence 578889999998763 22222 247999999987421 1 22356889999998888777654
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
+ ..-..+|++.|+.++... . |...|..||++-..+.+-.
T Consensus 126 ~likaKGtIVnvgSl~~~vpf--------------------------------------p-f~~iYsAsKAAihay~~tL 166 (289)
T KOG1209|consen 126 FLIKAKGTIVNVGSLAGVVPF--------------------------------------P-FGSIYSASKAAIHAYARTL 166 (289)
T ss_pred HHHHccceEEEecceeEEecc--------------------------------------c-hhhhhhHHHHHHHHhhhhc
Confidence 2 233579999999877531 1 4457999999887776654
Q ss_pred h-----cCCCEEEecCCcc
Q psy5825 420 L-----YKLPLAMVRPSIV 433 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V 433 (596)
. .|++++-+-+|.|
T Consensus 167 rlEl~PFgv~Vin~itGGv 185 (289)
T KOG1209|consen 167 RLELKPFGVRVINAITGGV 185 (289)
T ss_pred EEeeeccccEEEEecccce
Confidence 4 4555555555554
|
|
| >PTZ00325 malate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.033 Score=58.11 Aligned_cols=60 Identities=20% Similarity=0.163 Sum_probs=50.7
Q ss_pred HHHHhccccEEEEcCccCCh-hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccccc
Q psy5825 298 QQFIQHHIHVIIHAAASLRF-DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHS 358 (596)
Q Consensus 298 ~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g 358 (596)
+...+.++|+|||+||...- ..+..+++..|+.++.+++..+.. .++.++|+++|..|..
T Consensus 70 ~~~~l~gaDvVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~-~~~~~iviv~SNPvdv 130 (321)
T PTZ00325 70 WEKALRGADLVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVAS-SAPKAIVGIVSNPVNS 130 (321)
T ss_pred hHHHhCCCCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEecCcHHH
Confidence 45678899999999998543 345677899999999999999998 5899999999987754
|
|
| >KOG4169|consensus | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.091 Score=51.16 Aligned_cols=76 Identities=18% Similarity=0.207 Sum_probs=50.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH---hccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhc------CCCce
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI---QHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRC------SQLKA 347 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l---~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~------~~vkr 347 (596)
..+.|++.|+++.. +|. ..++.+ +..+|++||.|+..+ +.+.+..+.+|+.|..+=..++... +...-
T Consensus 55 ~~v~F~~~DVt~~~-~~~-~~f~ki~~~fg~iDIlINgAGi~~-dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGi 131 (261)
T KOG4169|consen 55 VSVIFIKCDVTNRG-DLE-AAFDKILATFGTIDILINGAGILD-DKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGI 131 (261)
T ss_pred ceEEEEEeccccHH-HHH-HHHHHHHHHhCceEEEEccccccc-chhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcE
Confidence 67999999999732 221 123333 246899999999876 5567778889987766555554321 22346
Q ss_pred EEEecCcc
Q psy5825 348 ILHVSTLY 355 (596)
Q Consensus 348 fV~vSS~~ 355 (596)
+|.+||++
T Consensus 132 IvNmsSv~ 139 (261)
T KOG4169|consen 132 IVNMSSVA 139 (261)
T ss_pred EEEecccc
Confidence 88888865
|
|
| >PTZ00266 NIMA-related protein kinase; Provisional | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.039 Score=65.38 Aligned_cols=7 Identities=29% Similarity=0.183 Sum_probs=2.8
Q ss_pred HHHHHHH
Q psy5825 408 TKAIGES 414 (596)
Q Consensus 408 SK~~aE~ 414 (596)
+|-+-|.
T Consensus 773 ~~~~~~~ 779 (1021)
T PTZ00266 773 AKNAKEM 779 (1021)
T ss_pred hhhHHHH
Confidence 3433343
|
|
| >PLN00106 malate dehydrogenase | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.03 Score=58.38 Aligned_cols=122 Identities=14% Similarity=-0.021 Sum_probs=81.5
Q ss_pred HHHHHhccccEEEEcCccCCh-hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChH
Q psy5825 297 DQQFIQHHIHVIIHAAASLRF-DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYE 375 (596)
Q Consensus 297 ~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~ 375 (596)
++...+.++|+|||+||...- ..+..+++..|+..+.++++.+.. .+...+|+++|-=|-+....+.
T Consensus 79 d~~~~l~~aDiVVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~-~~p~aivivvSNPvD~~~~i~t----------- 146 (323)
T PLN00106 79 QLGDALKGADLVIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAK-HCPNALVNIISNPVNSTVPIAA----------- 146 (323)
T ss_pred CHHHHcCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCeEEEEeCCCccccHHHHH-----------
Confidence 466788999999999998653 456677999999999999999998 5689999999865543111000
Q ss_pred HHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCC-CCccccC
Q psy5825 376 DLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWK-EPIVGWS 445 (596)
Q Consensus 376 ~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~-~p~~G~~ 445 (596)
..+...+. +. ....||.+++..+++-..++ .|++..-+.-.+|.+++. +-+|-|.
T Consensus 147 -----------~~~~~~s~-~p---~~~viG~~~LDs~Rl~~~lA~~lgv~~~~V~~~ViGeHg~~s~vp~~S 204 (323)
T PLN00106 147 -----------EVLKKAGV-YD---PKKLFGVTTLDVVRANTFVAEKKGLDPADVDVPVVGGHAGITILPLLS 204 (323)
T ss_pred -----------HHHHHcCC-CC---cceEEEEecchHHHHHHHHHHHhCCChhheEEEEEEeCCCccEeeehh
Confidence 00000000 00 12568888888888887777 788877776555555523 4455554
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=94.92 E-value=0.25 Score=47.49 Aligned_cols=117 Identities=17% Similarity=0.189 Sum_probs=74.8
Q ss_pred CcEEEEEeccCCCCCCCCHHH-HHHHhc---cccEEEEcCccCC---hhh------hHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHD-QQFIQH---HIHVIIHAAASLR---FDE------LIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~-~~~l~~---~vd~ViH~AA~v~---~~~------~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
..+.-+.+|+.|.+. -.+ ++.+.. ..++||+|||+.. |.. ....-+.+|+.++.+|..+....
T Consensus 50 p~~~t~v~Dv~d~~~---~~~lvewLkk~~P~lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl 126 (245)
T COG3967 50 PEIHTEVCDVADRDS---RRELVEWLKKEYPNLNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHL 126 (245)
T ss_pred cchheeeecccchhh---HHHHHHHHHhhCCchheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 456667789887652 011 233332 4799999999853 331 12346788999999998887641
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
..-.-+|.|||.-.+-+-. ..-.|..||++-..+-....
T Consensus 127 ~~q~~a~IInVSSGLafvPm~---------------------------------------~~PvYcaTKAaiHsyt~aLR 167 (245)
T COG3967 127 LRQPEATIINVSSGLAFVPMA---------------------------------------STPVYCATKAAIHSYTLALR 167 (245)
T ss_pred HhCCCceEEEeccccccCccc---------------------------------------ccccchhhHHHHHHHHHHHH
Confidence 1235789999976543211 11249999998876654433
Q ss_pred -----cCCCEEEecCCcccc
Q psy5825 421 -----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G 435 (596)
.++.|+=+=|+.|--
T Consensus 168 ~Qlk~t~veVIE~~PP~V~t 187 (245)
T COG3967 168 EQLKDTSVEVIELAPPLVDT 187 (245)
T ss_pred HHhhhcceEEEEecCCceec
Confidence 467777777888754
|
|
| >KOG1199|consensus | Back alignment and domain information |
|---|
Probab=91.77 E-value=0.044 Score=50.72 Aligned_cols=116 Identities=21% Similarity=0.254 Sum_probs=67.3
Q ss_pred cCeEEEEeCCCC---cccHHHHHHHHhhhh-hHHHhhhhh----hhhhcCcEEEEEeccCCCCCCCCHHHHHHHh-----
Q psy5825 236 VGGIYILLRSKK---NKTVQERLAEQFKDE-LFDRLKNEQ----ADILQRKVHIISGDISQPSLGISSHDQQFIQ----- 302 (596)
Q Consensus 236 v~~V~~LvR~~~---~~~~~~Rl~~~~~~~-~~~~l~~~~----~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~----- 302 (596)
++..+.||.+.. +....+||...-... +.| |.+.. ...+..++.|...|++. +.+.+.++
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lld-lp~skg~~vakelg~~~vf~padvts------ekdv~aala~ak~ 79 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLD-LPQSKGADVAKELGGKVVFTPADVTS------EKDVRAALAKAKA 79 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEe-CCcccchHHHHHhCCceEEeccccCc------HHHHHHHHHHHHh
Confidence 455777777642 223455665532221 111 11111 11233789999999984 34455443
Q ss_pred --ccccEEEEcCccC------Chh-------hhHHHHHHHHHHHHHHHHHHHHhc-------CCCceEEEecCccccc
Q psy5825 303 --HHIHVIIHAAASL------RFD-------ELIQDAFTLNIQATRELLDLATRC-------SQLKAILHVSTLYTHS 358 (596)
Q Consensus 303 --~~vd~ViH~AA~v------~~~-------~~~~~~~~~NV~GT~~LL~~a~~~-------~~vkrfV~vSS~~v~g 358 (596)
..+|+.++||++. ++. .++...+++|+.||.|++++.... .+.+|=|.+-|++|..
T Consensus 80 kfgrld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglmg~nepdq~gqrgviintasvaa 157 (260)
T KOG1199|consen 80 KFGRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLMGENEPDQNGQRGVIINTASVAA 157 (260)
T ss_pred hccceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhhcCCCCCCCCcceEEEeeceeee
Confidence 3579999999963 111 233446788999999999886531 2335666666666543
|
|
| >KOG1014|consensus | Back alignment and domain information |
|---|
Probab=91.36 E-value=2.9 Score=42.89 Aligned_cols=120 Identities=15% Similarity=0.113 Sum_probs=77.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh-----h----hHHHHHHHHHHHHHHHHHHHHh-c--
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD-----E----LIQDAFTLNIQATRELLDLATR-C-- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~-----~----~~~~~~~~NV~GT~~LL~~a~~-~-- 342 (596)
-.+.++..|+++++- .-+.+...+.+ |.++||++|+.... . .+...+.+|+.++..+.+.... +
T Consensus 99 vev~~i~~Dft~~~~--~ye~i~~~l~~~~VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~ 176 (312)
T KOG1014|consen 99 VEVRIIAIDFTKGDE--VYEKLLEKLAGLDVGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVE 176 (312)
T ss_pred cEEEEEEEecCCCch--hHHHHHHHhcCCceEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhc
Confidence 358899999998873 22334444444 56999999986411 1 2234567799998877776653 1
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH----H
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE----K 418 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~----~ 418 (596)
.+-.-+|++||.+-.-.. | .-..|+.||..-+.+-. +
T Consensus 177 r~~G~IvnigS~ag~~p~---------------------------------p------~~s~ysasK~~v~~~S~~L~~E 217 (312)
T KOG1014|consen 177 RKKGIIVNIGSFAGLIPT---------------------------------P------LLSVYSASKAFVDFFSRCLQKE 217 (312)
T ss_pred CCCceEEEeccccccccC---------------------------------h------hHHHHHHHHHHHHHHHHHHHHH
Confidence 244578999987632210 0 11459999986655443 3
Q ss_pred Hh-cCCCEEEecCCccccCC
Q psy5825 419 YL-YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 419 ~~-~gl~~~IlRp~~V~G~~ 437 (596)
+. .|+.+..+-|..|.+..
T Consensus 218 y~~~gI~Vq~v~p~~VaTkm 237 (312)
T KOG1014|consen 218 YESKGIFVQSVIPYLVATKM 237 (312)
T ss_pred HHhcCeEEEEeehhheeccc
Confidence 33 78989988898887754
|
|
| >PF08732 HIM1: HIM1; InterPro: IPR014843 HIM1 (high induction of mutagenesis protein 1) plays a role in the control of spontaneous and induced mutagenesis [] | Back alignment and domain information |
|---|
Probab=89.14 E-value=1.3 Score=46.79 Aligned_cols=98 Identities=18% Similarity=0.176 Sum_probs=62.6
Q ss_pred HhccccEEEEcCccCChhhhH--HHHHHHHHHHHHHHHHHHH----hcCCCceEEEecCcccccCCccccccccCCCCCh
Q psy5825 301 IQHHIHVIIHAAASLRFDELI--QDAFTLNIQATRELLDLAT----RCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSY 374 (596)
Q Consensus 301 l~~~vd~ViH~AA~v~~~~~~--~~~~~~NV~GT~~LL~~a~----~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~ 374 (596)
++.+|..+|-+-|..+....- .....+-..-+..|++... . ...++||.++|.......
T Consensus 200 ~l~~i~t~is~LGsts~~a~~s~~~~~~IDy~Lnl~laq~f~~~~~~-~~~K~~vIvTSfn~~~~s-------------- 264 (410)
T PF08732_consen 200 SLDDIKTMISTLGSTSAQAKSSKAARHKIDYQLNLDLAQTFANDIKN-TGNKKLVIVTSFNNNAIS-------------- 264 (410)
T ss_pred chhhhhhheecCCCChhhccccccchhhccccccHHHHHHhhhhhcc-CCCceEEEEEecCcchhh--------------
Confidence 456777888877776533211 1111222223344444444 3 467999999997643210
Q ss_pred HHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCC-CEEEecCCccccCCCC
Q psy5825 375 EDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKL-PLAMVRPSIVVSTWKE 439 (596)
Q Consensus 375 ~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl-~~~IlRp~~V~G~~~~ 439 (596)
....|-.+|..-|.-|.... +.+ .++|+|||.+.|.+.+
T Consensus 265 --------------------------~~f~Yfk~K~~LE~dl~~~l~~~l~~lvILRPGplvG~h~~ 305 (410)
T PF08732_consen 265 --------------------------SMFPYFKTKGELENDLQNLLPPKLKHLVILRPGPLVGEHGS 305 (410)
T ss_pred --------------------------hhhhhhHHHHHHHHHHHhhcccccceEEEecCccccCCCCC
Confidence 12359999999999998776 324 6899999999998765
|
It is thought to participate in the control of processing of mutational intermediates appearing during error-prone bypass of DNA damage. |
| >PF10500 SR-25: Nuclear RNA-splicing-associated protein; InterPro: IPR019532 SR-25, otherwise known as ADP-ribosylation factor-like factor 6-interacting protein 4, is expressed in virtually all tissue types | Back alignment and domain information |
|---|
Probab=87.83 E-value=1.1 Score=43.29 Aligned_cols=9 Identities=33% Similarity=0.759 Sum_probs=5.4
Q ss_pred CcEEEEEec
Q psy5825 277 RKVHIISGD 285 (596)
Q Consensus 277 ~rv~~v~GD 285 (596)
.+..+|.||
T Consensus 181 GRtRLIkGd 189 (225)
T PF10500_consen 181 GRTRLIKGD 189 (225)
T ss_pred Cceeeeccc
Confidence 455666666
|
At the N terminus there is a repeat of serine-arginine (SR repeat), and towards the middle of the protein there are clusters of both serines and of basic amino acids. The presence of many nuclear localisation signals strongly implies that this is a nuclear protein that may contribute to RNA splicing []. SR-25 is also implicated, along with heat-shock-protein-27, as a mediator in the Rac1 (GTPase ras-related C3 botulinum toxin substrate 1; also see IPR019093 from INTERPRO) signalling pathway []. |
| >cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases | Back alignment and domain information |
|---|
Probab=85.16 E-value=3.8 Score=42.83 Aligned_cols=107 Identities=9% Similarity=-0.028 Sum_probs=70.7
Q ss_pred HHhccccEEEEcCccCC-hhhhHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEecCcccccCCccccccccCCCCChHHH
Q psy5825 300 FIQHHIHVIIHAAASLR-FDELIQDAFTLNIQATRELLDLATRCSQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDL 377 (596)
Q Consensus 300 ~l~~~vd~ViH~AA~v~-~~~~~~~~~~~NV~GT~~LL~~a~~~~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~ 377 (596)
..+.++|+||-+|+... ...+..+++..|+.-...+......... -..+|.+|. - +| +
T Consensus 74 ~~~~daDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~~~~~~iiivvsN-P----------------vD---~ 133 (322)
T cd01338 74 VAFKDADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDVASRDVKVLVVGN-P----------------CN---T 133 (322)
T ss_pred HHhCCCCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhhCCCCeEEEEecC-c----------------HH---H
Confidence 44689999999999754 3345667899999999999998887331 233444431 1 11 0
Q ss_pred HHHHhcCChHHHHhhhhhhcCC-CCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCC
Q psy5825 378 AHVMQTTNQEELEILSSMLFGG-IYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 378 ~~~~~~~~e~~~~~~~p~~~~~-~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~ 437 (596)
+ ........+. .....||.|++..+++....+ .|++...+|..+|||.+
T Consensus 134 ~-----------t~~~~k~sg~~p~~~ViG~t~LDs~Rl~~~la~~lgv~~~~v~~~~V~GeH 185 (322)
T cd01338 134 N-----------ALIAMKNAPDIPPDNFTAMTRLDHNRAKSQLAKKAGVPVTDVKNMVIWGNH 185 (322)
T ss_pred H-----------HHHHHHHcCCCChHheEEehHHHHHHHHHHHHHHhCcChhHeEEEEEEeCC
Confidence 0 0000001110 012468889999999998888 78999999988888875
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
| >KOG1478|consensus | Back alignment and domain information |
|---|
Probab=83.48 E-value=3.6 Score=40.95 Aligned_cols=130 Identities=17% Similarity=0.172 Sum_probs=75.3
Q ss_pred CcEEEEEeccCCCCCCCC-HHHHHHHhccccEEEEcCccCCh----------------------------------hhhH
Q psy5825 277 RKVHIISGDISQPSLGIS-SHDQQFIQHHIHVIIHAAASLRF----------------------------------DELI 321 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~-~~~~~~l~~~vd~ViH~AA~v~~----------------------------------~~~~ 321 (596)
-++++|..|+++...=+. ..++..-++..|+|+-.||...+ .+++
T Consensus 61 i~~~yvlvD~sNm~Sv~~A~~di~~rf~~ld~iylNAg~~~~~gi~w~~avf~~fsnpv~amt~pt~~~~t~G~is~D~l 140 (341)
T KOG1478|consen 61 IEVTYVLVDVSNMQSVFRASKDIKQRFQRLDYIYLNAGIMPNPGINWKAAVFGLFSNPVIAMTSPTEGLLTQGKISADGL 140 (341)
T ss_pred eEEEEEEEehhhHHHHHHHHHHHHHHhhhccEEEEccccCCCCcccHHHHHHHHhhchhHHhcCchhhhhhcceecccch
Confidence 468889999986432110 01223334567999998886421 1223
Q ss_pred HHHHHHHHHHHHHHHHHHHh--c-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcC
Q psy5825 322 QDAFTLNIQATRELLDLATR--C-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFG 398 (596)
Q Consensus 322 ~~~~~~NV~GT~~LL~~a~~--~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~ 398 (596)
...+++||.|--.|++-... + ..-..+|++||..+--..- +- +++.. ..+
T Consensus 141 g~iFetnVFGhfyli~~l~pll~~~~~~~lvwtSS~~a~kk~l-----------sl------------eD~q~----~kg 193 (341)
T KOG1478|consen 141 GEIFETNVFGHFYLIRELEPLLCHSDNPQLVWTSSRMARKKNL-----------SL------------EDFQH----SKG 193 (341)
T ss_pred hhHhhhcccchhhhHhhhhhHhhcCCCCeEEEEeecccccccC-----------CH------------HHHhh----hcC
Confidence 44688999997766654432 1 2234899999987633211 11 11110 011
Q ss_pred CCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccC
Q psy5825 399 GIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 399 ~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~ 436 (596)
.-+|..||.+-..|-.+.. -|+...++-||+....
T Consensus 194 ---~~pY~sSKrl~DlLh~A~~~~~~~~g~~qyvv~pg~~tt~ 233 (341)
T KOG1478|consen 194 ---KEPYSSSKRLTDLLHVALNRNFKPLGINQYVVQPGIFTTN 233 (341)
T ss_pred ---CCCcchhHHHHHHHHHHHhccccccchhhhcccCceeecc
Confidence 2469999999987765544 3455667777776554
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=82.30 E-value=6 Score=37.19 Aligned_cols=75 Identities=17% Similarity=0.130 Sum_probs=43.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh----hh-hHHHHHHHHHHHHHHHHHHHHh---
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF----DE-LIQDAFTLNIQATRELLDLATR--- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~----~~-~~~~~~~~NV~GT~~LL~~a~~--- 341 (596)
..+.++.+|+++.. ++..++ ..+|++||+||.... +. +......+|+.|+......+..
T Consensus 65 ~~~~~~~~Dl~~~~------~v~~~v~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 138 (169)
T PRK06720 65 GEALFVSYDMEKQG------DWQRVISITLNAFSRIDMLFQNAGLYKIDSIFSRQQENDSNVLCINDVWIEIKQLTSSFM 138 (169)
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccccchhHhhceeccHHHHHHHHHHHHHH
Confidence 45678899998653 244332 368999999997532 22 2122224456655444444332
Q ss_pred -------cCCCceEEEecCcccc
Q psy5825 342 -------CSQLKAILHVSTLYTH 357 (596)
Q Consensus 342 -------~~~vkrfV~vSS~~v~ 357 (596)
.....||..|||.++.
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~ 161 (169)
T PRK06720 139 KQQEEVVLSDLPIFGIIGTKGQS 161 (169)
T ss_pred hcCCEEEeecCceeeEecccccc
Confidence 1234688888887654
|
|
| >COG0623 FabI Enoyl-[acyl-carrier-protein] | Back alignment and domain information |
|---|
Probab=82.20 E-value=21 Score=35.29 Aligned_cols=32 Identities=9% Similarity=0.169 Sum_probs=23.0
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCC
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLR 316 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~ 316 (596)
-.++++|+++. +.++.++. ..|.|+|+-|..+
T Consensus 58 ~~v~~cDV~~d------~~i~~~f~~i~~~~g~lD~lVHsIaFa~ 96 (259)
T COG0623 58 DLVLPCDVTND------ESIDALFATIKKKWGKLDGLVHSIAFAP 96 (259)
T ss_pred CeEEecCCCCH------HHHHHHHHHHHHhhCcccEEEEEeccCC
Confidence 45789999854 34555553 4799999998764
|
|
| >cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases | Back alignment and domain information |
|---|
Probab=80.38 E-value=5 Score=42.04 Aligned_cols=46 Identities=17% Similarity=0.117 Sum_probs=36.6
Q ss_pred HHHHHhccccEEEEcCccCCh-hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 297 DQQFIQHHIHVIIHAAASLRF-DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 297 ~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
++...+.++|+|||+|+.... ..+..+++..|+.-...+.......
T Consensus 71 ~~~~~l~~aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 71 DPEEAFKDVDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred CHHHHhCCCCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 355677899999999998754 3455779999999999998777764
|
MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others. |
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
No homologous structure with e-value below 0.005
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} Length = 478 | Back alignment and structure |
|---|
Score = 156 bits (396), Expect = 8e-42
Identities = 53/312 (16%), Positives = 114/312 (36%), Gaps = 44/312 (14%)
Query: 239 IYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQ 298
+ L+R++ ++ + RL + F + L++ + R + +++GD S+P LG+
Sbjct: 103 LICLVRAESDEDARRRLEKTFDSGDPELLRHFKELAADR-LEVVAGDKSEPDLGLDQPMW 161
Query: 299 QFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHS 358
+ + + +I+ +AA + + F N+ T EL+ +A ++LK +VST +
Sbjct: 162 RRLAETVDLIVDSAAMVNAFPY-HELFGPNVAGTAELIRIALT-TKLKPFTYVSTADVGA 219
Query: 359 YREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418
P ED + I + G + Y +K GE ++ +
Sbjct: 220 A--------IEPSAFTED---------ADIRVISPTRTVDGGWAGGYGTSKWAGEVLLRE 262
Query: 419 Y--LYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI-------HTFYAK 469
L LP+A+ R ++++ ++ + A G+ + +
Sbjct: 263 ANDLCALPVAVFRCGMILADTSYAGQLNMSDWV-TRMVLSLMATGIAPRSFYEPDSEGNR 321
Query: 470 HDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529
D +PV + + + A Y++ I
Sbjct: 322 QRAHFDGLPVTFVAEAIAVLGARVAGS--------------SLAGFATYHVMNPHDDGIG 367
Query: 530 WLEYMNSVQAAG 541
EY++ + AG
Sbjct: 368 LDEYVDWLIEAG 379
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 64.9 bits (157), Expect = 5e-11
Identities = 80/500 (16%), Positives = 156/500 (31%), Gaps = 134/500 (26%)
Query: 191 HDKH-----SKHKHKKKD--KHGDKTNPKEKDAK----------SKEKESHKSSAGPKCY 233
H H +H+++ KD + D K SKE+ H +
Sbjct: 3 HHHHMDFETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKD--- 59
Query: 234 PEVGGIYIL---LRSKKNKTVQ---------------ERLAEQFKD-ELFDRLKNEQADI 274
V G L L SK+ + VQ + + + + R+ EQ D
Sbjct: 60 -AVSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDR 118
Query: 275 LQRKVHIIS-GDIS--QPSLGISSHDQQFIQHHIHVIIH----------AAASLRFDELI 321
L + + ++S QP L + + ++ +V+I A +
Sbjct: 119 LYNDNQVFAKYNVSRLQPYLKLRQALLE-LRPAKNVLIDGVLGSGKTWVALDVCL-SYKV 176
Query: 322 QDAFTLNI--------QATRELLD-LATRCSQLKAILHVSTLYTHSYR---EDIQEEFYP 369
Q I + +L+ L Q+ + ++ + + IQ E
Sbjct: 177 QCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRR 236
Query: 370 PLFS--YED----LAHV----------------MQTTNQEELEILSSMLFGGIY--NNSY 405
L S YE+ L +V + T ++ + LS+ I ++S
Sbjct: 237 LLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISLDHHSM 296
Query: 406 SFTKAIGESVVEKYL----YKLPLAMVR--P---SIV-------VSTWKEPIVGWSNNLY 449
+ T +S++ KYL LP ++ P SI+ ++TW W +
Sbjct: 297 TLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDN----WKHVNC 352
Query: 450 GPGGAAAGAALGLIHTFYAKHD-KKCDLIPVDVA-TNMMLGVVWKTA--------LDHGH 499
++L ++ + + + P ++L ++W ++ H
Sbjct: 353 DKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLH 412
Query: 500 VAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGKCDEQYIASVLAIWTYTF 559
SLV P +SI S Y ++ N + Y ++ +
Sbjct: 413 K---YSLVE----KQPKESTISIPSIYLELKVKLENEYALHRSIVDHY--NIPKTFDSDD 463
Query: 560 CMEQNQFMYLLRVWFL--HM 577
+ Y + H+
Sbjct: 464 LIPPYLDQYFY--SHIGHHL 481
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 43.7 bits (102), Expect = 2e-04
Identities = 33/214 (15%), Positives = 63/214 (29%), Gaps = 41/214 (19%)
Query: 209 TNPKEKDAKSKEKESHKSSAGPKCYPE----VGGIYILLRSK--KNKTVQERLAEQFKDE 262
+ + D + HK S K E + IY+ L+ K + + + +
Sbjct: 397 FDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRSIVDHYN-- 454
Query: 263 LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQ---QFIQHHIHVIIHAAASLRFDE 319
+ + S D+ P L DQ I HH+ I H F
Sbjct: 455 ------------IPKTFD--SDDLIPPYL-----DQYFYSHIGHHLKNIEHPERMTLFRM 495
Query: 320 LIQD-AFTLNIQATRELLDLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDL 377
+ D F ++ A + L Y Y D ++ + + D
Sbjct: 496 VFLDFRF---LEQKIRHDSTAWNASGSILNTLQQLKFY-KPYICDNDPKYERLVNAILDF 551
Query: 378 AHVMQTT--NQEELEILSSMLF---GGIYNNSYS 406
++ + ++L L I+ ++
Sbjct: 552 LPKIEENLICSKYTDLLRIALMAEDEAIFEEAHK 585
|
| >3pgw_S U1-70K; protein-RNA complex, U1 snRNA, SM fold, SM core, RRM, splici SNRNPS, splicing factors; HET: DNA; 4.40A {Homo sapiens} PDB: 3cw1_K 2l5i_A 2l5j_A* Length = 437 | Back alignment and structure |
|---|
Score = 51.0 bits (121), Expect = 6e-07
Identities = 19/170 (11%), Positives = 53/170 (31%), Gaps = 1/170 (0%)
Query: 6 KSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKK 65
K+KD+D S S + + D E +
Sbjct: 268 SRDKEERRRSRERSKDKDRDRKRRSSRSRERARRERERKEELRGGGGDMAEPSEA-GDAP 326
Query: 66 DKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRE 125
+ + + + ++++R+ + S E+ + +++ +++ HK ++ E
Sbjct: 327 PDDGPPGELGPDGPDGPEEKGRDRDRERRRSHRSERERRRDRDRDRDRDREHKRGERGSE 386
Query: 126 RDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPTQKSP 175
R +DE + + + + + + P + +P
Sbjct: 387 RGRDEARGGGGGQDNGLEGLGNDSRDMYMESEGGDGYLAPENGYLMEAAP 436
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 48.2 bits (114), Expect = 1e-06
Identities = 14/84 (16%), Positives = 37/84 (44%), Gaps = 9/84 (10%)
Query: 54 KDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKK 113
+E E +K +E+ + + +E D K ++ ++ ++K+ ++ + +
Sbjct: 78 DRLTQEPESIRKWREEQRKRL----QELDA---ASKVMEQEWREK--AKKDLEEWNQRQS 128
Query: 114 EKSHKHKDKDRERDKDEKKEQKES 137
E+ K+K +R DK ++
Sbjct: 129 EQVEKNKINNRIADKAFYQQPDAD 152
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 5e-04
Identities = 6/43 (13%), Positives = 21/43 (48%)
Query: 94 SKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKE 136
++ + E E ++ ++++ K + D + + E +E+ +
Sbjct: 75 AQADRLTQEPESIRKWREEQRKRLQELDAASKVMEQEWREKAK 117
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 40.5 bits (94), Expect = 5e-04
Identities = 10/66 (15%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKK- 106
++ K+ ++ D K + + ++K+ +K+ ++ + ++ E+ E K K ++ +K
Sbjct: 93 EQRKRLQELD-AASKVMEQEWREKA-----KKDLEEWNQRQSEQVE-KNKINNRIADKAF 145
Query: 107 -KEKKD 111
++
Sbjct: 146 YQQPDA 151
|
| >3lvg_D LCB, clathrin light chain B; SELF assembly, coated PIT, cytoplasmic vesicle, membrane, Ca structural protein; 7.94A {Bos taurus} Length = 190 | Back alignment and structure |
|---|
Score = 40.1 bits (93), Expect = 7e-04
Identities = 10/73 (13%), Positives = 35/73 (47%), Gaps = 6/73 (8%)
Query: 72 SAVSSKEKEKDKVSS-KEKERKESKPKESSSEKEKKKEKKDKKEKSHKHKDK-DRERDKD 129
+ +E + + +E++RK + + K +++ +EK+ K ++ ++ + +
Sbjct: 75 AQADRLTQEPESIRKWREEQRKRLQELD---AASKVM-EQEWREKAKKDLEEWNQRQSEQ 130
Query: 130 EKKEQKESKSSSK 142
+K + ++ + K
Sbjct: 131 VEKNKINNRIADK 143
|
| >4ady_A RPN2, 26S proteasome regulatory subunit RPN2; protein binding, PC repeat; 2.70A {Saccharomyces cerevisiae} Length = 963 | Back alignment and structure |
|---|
Score = 47.9 bits (113), Expect = 9e-06
Identities = 19/179 (10%), Positives = 68/179 (37%), Gaps = 10/179 (5%)
Query: 3 YSVKSSSSSSS-AHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKE 61
+ + + + ++P ++ +T+ S+T+ + K +K + +++K+
Sbjct: 782 FQMNCYAKEDAFSYPRMYEEASGKEVEKVATAVLSTTARAKARAKKTKKEKGPNEEEKKK 841
Query: 62 KEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPK--ESSSEKEKKKEKKDKKEKSHKH 119
+ ++ +++ ++ ++ K+ K + SKP ++ + ++ + K +
Sbjct: 842 EHEEKEKERETNKKGIKETKENDEEFYKNKYSSKPYKVDNMTRILPQQSRYISFIKDDRF 901
Query: 120 KDKDRER-------DKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPAPTPT 171
+ + +D + ++ + + N+ P + P A P+
Sbjct: 902 VPVRKFKGNNGVVVLRDREPKEPVALIETVRQMKDVNAPLPTPFKVDDNVDFPSALQPS 960
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* Length = 317 | Back alignment and structure |
|---|
Score = 46.9 bits (112), Expect = 9e-06
Identities = 31/237 (13%), Positives = 69/237 (29%), Gaps = 62/237 (26%)
Query: 253 ERLAEQFKDE---LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVII 309
LAE++ + D ++ + + I+ D+S D+ ++ I I
Sbjct: 17 PYLAEKYGKKNVIASDIVQRDTG-----GIKFITLDVSNRDEI----DRAVEKYSIDAIF 67
Query: 310 HAAA--SLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEF 367
H A S + ++ A+ +N+ T +L+ A + +++ ++ ST+ F
Sbjct: 68 HLAGILSAKGEKDPALAYKVNMNGTYNILEAA-KQHRVEKVVIPSTI----------GVF 116
Query: 368 YPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY--LYKLPL 425
P + I + TK E + + Y + L +
Sbjct: 117 GPET----------PKNKVPSITITRP-------RTMFGVTKIAAELLGQYYYEKFGLDV 159
Query: 426 AMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFY--AKHDKKCDLIPVD 480
+R + + A +K +
Sbjct: 160 RSLRYP---------------GIISYKAEPTAGTTDYAVEIFYYAVKREKYK-CYLA 200
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 47.4 bits (113), Expect = 1e-05
Identities = 15/93 (16%), Positives = 36/93 (38%)
Query: 47 SKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKK 106
+K + + E + D + E+E +++ +E K + +
Sbjct: 945 KSLLEKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQ 1004
Query: 107 KEKKDKKEKSHKHKDKDRERDKDEKKEQKESKS 139
EKK +E + K+K + + + K++ K+
Sbjct: 1005 TEKKTIEEWADKYKHETEQLVSELKEQNTLLKT 1037
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 45.9 bits (109), Expect = 4e-05
Identities = 15/90 (16%), Positives = 38/90 (42%)
Query: 47 SKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKK 106
K + + E EK + D E+ + + + ++V S ++E + + + ++ EKK
Sbjct: 949 EKMNNLEITYSTETEKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKK 1008
Query: 107 KEKKDKKEKSHKHKDKDRERDKDEKKEQKE 136
++ + H+ + E + + E
Sbjct: 1009 TIEEWADKYKHETEQLVSELKEQNTLLKTE 1038
|
| >2dfs_A Myosin-5A; myosin-V, inhibited state, cryoelectron tomograp contractIle protein-transport protein complex; 24.00A {Gallus gallus} Length = 1080 | Back alignment and structure |
|---|
Score = 43.6 bits (103), Expect = 2e-04
Identities = 19/98 (19%), Positives = 41/98 (41%), Gaps = 4/98 (4%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSA----VSSKEKEKDKVSSKEKERKESKPKESSSEK 103
+K + D +R + E+E K+ + ++ KE + +++K +E K +
Sbjct: 963 EKLRSDVERLRMSEEEAKNATNRVLSLQEEIAKLRKELHQTQTEKKTIEEWADKYKHETE 1022
Query: 104 EKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSS 141
+ E K++ K++ R D+ KE E+
Sbjct: 1023 QLVSELKEQNTLLKTEKEELNRRIHDQAKEITETMEKK 1060
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} Length = 342 | Back alignment and structure |
|---|
Score = 46.5 bits (111), Expect = 1e-05
Identities = 24/232 (10%), Positives = 57/232 (24%), Gaps = 66/232 (28%)
Query: 278 KVHIISGDISQPSLGISSHDQQFIQHH---IHVIIHAAASLRFD-ELIQDAFTLNIQATR 333
+ ++ D ++ + +I +A Q+ + T
Sbjct: 57 EPECRVAEML---------DHAGLERALRGLDGVIFSAGYYPSRPRRWQEEVASALGQTN 107
Query: 334 ELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILS 393
+ ++ IL+V + Y +E L + +
Sbjct: 108 PFYAACLQA-RVPRILYVGSAYAMPRHPQGLP-------GHEGLFYDSLPSG-------- 151
Query: 394 SMLFGGIYNNSYSFTKAIGESVVEKYLYK-LPLAMVRPSIVVSTWKEPIVGWSNNLYGPG 452
+SY K + + LP+ + P +V G
Sbjct: 152 --------KSSYVLCKWALDEQAREQARNGLPVVIGIPGMV---------------LGEL 188
Query: 453 GAAAGAALGLIHTFYAKH-----DKKCDLIPV-DVATNMMLGVVWKTALDHG 498
+I + ++I + +++ AL+ G
Sbjct: 189 DIGPTTG-RVITAIGNGEMTHYVAGQRNVIDAAEAGRGLLM------ALERG 233
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} Length = 342 | Back alignment and structure |
|---|
Score = 46.2 bits (110), Expect = 2e-05
Identities = 42/262 (16%), Positives = 77/262 (29%), Gaps = 73/262 (27%)
Query: 263 LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASL------R 316
L D + E V + D+S P ++ ++ VI H AA +
Sbjct: 50 LIDVFQPEAPAGFSGAVDARAADLSAPGE-----AEKLVEARPDVIFHLAAIVSGEAELD 104
Query: 317 FDELIQDAFTLNIQATRELLDLA----TRCSQLKAILHVSTL--YTHSYREDIQEEFYP- 369
FD+ + +N+ TR L D + ++ S++ + I +EF+
Sbjct: 105 FDK----GYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHTT 160
Query: 370 PLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY--LYKLPLAM 427
PL SY KAI E ++ Y
Sbjct: 161 PL-------------------------------TSYGTQKAICELLLSDYSRRGFFDGIG 189
Query: 428 VRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMML 487
+R + + P AA+G ++ + PV +
Sbjct: 190 IRLPTICIRPGK-----------PNAAASGFFSNILREPLVGQEAVL---PVPESIRHWH 235
Query: 488 GVVWKTALD---HGHVAPPASL 506
++A+ HG + +
Sbjct: 236 ASP-RSAVGFLIHGAMIDVEKV 256
|
| >1i84_S Smooth muscle myosin heavy chain; muscle protein, myosin subfragment 2, heavy meromyosin, essential light chain, motor protein; HET: MLY; 20.00A {Gallus gallus} SCOP: i.15.1.1 PDB: 3j04_A 3dtp_B 3dtp_A Length = 1184 | Back alignment and structure |
|---|
Score = 45.2 bits (107), Expect = 6e-05
Identities = 24/156 (15%), Positives = 59/156 (37%), Gaps = 10/156 (6%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKK 107
K++K + +E++K+ +K K K + E E + K ++S E EK K
Sbjct: 1003 TKERKLLEERVSDLTTNLAEEEEKAKNLTKLKNKHESMISELEVRLKKEEKSRQELEKIK 1062
Query: 108 EKKDKKEKSHKHKDKDRERDKDEKKEQKESKSSSKIVSSSHNSKEPASGSQLISHPPPPA 167
K + + + + + E K Q K + + E + + +
Sbjct: 1063 RKLEGESSDLHEQIAELQAQIAELKAQLAKKEEELQAALARLEDETSQKNNALK------ 1116
Query: 168 PTPTQKSPVKTKEKEKEKESSTTHDKHSKHKHKKKD 203
+ +++ + +++ + +K + +K+D
Sbjct: 1117 ----KIRELESHISDLQEDLESEKAARNKAEKQKRD 1148
|
| >1g8x_A Myosin II heavy chain fused to alpha-actinin 3; motor, lever ARM, protein engineering, structural protein; HET: ADP; 2.80A {Dictyostelium discoideum} SCOP: k.1.1.1 Length = 1010 | Back alignment and structure |
|---|
Score = 44.3 bits (105), Expect = 1e-04
Identities = 8/72 (11%), Positives = 21/72 (29%)
Query: 48 KKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKK 107
+ + + + K+ + + K E+ +E E+ +
Sbjct: 939 EGQSNSDLLSILAQLTELNYNGVPELTERKDTFFAQQWTGVKSSAETYKNTLLAELERLQ 998
Query: 108 EKKDKKEKSHKH 119
+ +D H H
Sbjct: 999 KIEDLHHHHHHH 1010
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A Length = 315 | Back alignment and structure |
|---|
Score = 42.2 bits (100), Expect = 2e-04
Identities = 24/116 (20%), Positives = 41/116 (35%), Gaps = 23/116 (19%)
Query: 262 ELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQ--QFIQHH-IHVIIHAAASLRFD 318
+ + + Q + + + I HVI+H AA R D
Sbjct: 17 AVHKEFQQNNWHAVGCGFRRARPKFEQ--VNLLDSNAVHHIIHDFQPHVIVHCAAERRPD 74
Query: 319 ------ELIQDAFTLNIQATRELLDLATRCSQLKAIL-HVSTLY----THS-YRED 362
+ A LN+ A+ LA + + A L ++S+ Y T+ YRE+
Sbjct: 75 VVENQPDA---ASQLNVDASGN---LAKEAAAVGAFLIYISSDYVFDGTNPPYREE 124
|
| >1rxt_A Myristoyl-, glycylpeptide N-tetradecanoyltransferase 1; alpha-beta structure, unique N-myristoyltransferase fold; 3.00A {Homo sapiens} SCOP: d.108.1.2 d.108.1.2 Length = 496 | Back alignment and structure |
|---|
Score = 42.4 bits (99), Expect = 3e-04
Identities = 13/118 (11%), Positives = 46/118 (38%)
Query: 1 MAYSVKSSSSSSSAHPSPHKNKDKDSSAIPSTSTSSSTSNPTNSSSSKKDKKDKDRDKEK 60
MA +++ + + + S + ++ S + + K+K
Sbjct: 1 MADESETAVKPPAPPLPQMMEGNGNGHEHCSDCENEEDNSYNRGGLSPANDTGAKKKKKK 60
Query: 61 EKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEKEKKKEKKDKKEKSHK 118
+K+KK+K + + + + + + ++ + + + S + K ++ ++S++
Sbjct: 61 QKKKKEKGSETDSAQDQPVKMNSLPAERIQEIQKAIELFSVGQGPAKTMEEASKRSYQ 118
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 596 | |||
| 4dqv_A | 478 | Probable peptide synthetase NRP (peptide synthase; | 99.96 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 99.95 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 99.94 | |
| 4b8w_A | 319 | GDP-L-fucose synthase; oxidoreductase; HET: NAP GD | 99.94 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 99.94 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 99.94 | |
| 4f6l_B | 508 | AUSA reductase domain protein; thioester reductase | 99.94 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 99.93 | |
| 3ehe_A | 313 | UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, | 99.93 | |
| 2c20_A | 330 | UDP-glucose 4-epimerase; carbohydrate metabolism, | 99.93 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 99.93 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 99.93 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 99.93 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 99.93 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 99.92 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 99.92 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 99.92 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 99.92 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 99.92 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 99.92 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 99.92 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 99.91 | |
| 2b69_A | 343 | UDP-glucuronate decarboxylase 1; UDP-glucoronic ac | 99.91 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 99.91 | |
| 1e6u_A | 321 | GDP-fucose synthetase; epimerase/reductase, SDR, R | 99.91 | |
| 2hun_A | 336 | 336AA long hypothetical DTDP-glucose 4,6-dehydrat; | 99.91 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 99.91 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 99.9 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 99.9 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 99.9 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 99.9 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 99.9 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 99.9 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 99.9 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 99.89 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 99.89 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 99.89 | |
| 3ajr_A | 317 | NDP-sugar epimerase; L-threonine dehydrogenase, L- | 99.89 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 99.89 | |
| 3st7_A | 369 | Capsular polysaccharide synthesis enzyme CAP5F; ro | 99.89 | |
| 3gpi_A | 286 | NAD-dependent epimerase/dehydratase; structural ge | 99.88 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 99.88 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 99.88 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 99.88 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 99.88 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 99.87 | |
| 1z7e_A | 660 | Protein aRNA; rossmann fold, OB-like fold, hydrola | 99.87 | |
| 1z45_A | 699 | GAL10 bifunctional protein; epimerase, mutarotase, | 99.87 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 99.87 | |
| 2hrz_A | 342 | AGR_C_4963P, nucleoside-diphosphate-sugar epimeras | 99.87 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 99.87 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 99.86 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 99.86 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 99.86 | |
| 2v6g_A | 364 | Progesterone 5-beta-reductase; tyrosine-dependent | 99.86 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 99.86 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 99.85 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 99.85 | |
| 2rh8_A | 338 | Anthocyanidin reductase; flavonoids, rossmann fold | 99.84 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 99.84 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 99.84 | |
| 2p4h_X | 322 | Vestitone reductase; NADPH-dependent reductase, is | 99.84 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 99.83 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 99.83 | |
| 3oh8_A | 516 | Nucleoside-diphosphate sugar epimerase (SULA FAMI; | 99.83 | |
| 4b4o_A | 298 | Epimerase family protein SDR39U1; isomerase; HET: | 99.82 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 99.8 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 99.79 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 99.79 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 99.79 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 99.78 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 99.77 | |
| 3ay3_A | 267 | NAD-dependent epimerase/dehydratase; glucuronic ac | 99.77 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 99.76 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 99.72 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 99.71 | |
| 2a35_A | 215 | Hypothetical protein PA4017; alpha-beta-alpha sand | 99.71 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 99.7 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 99.69 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 99.68 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 99.67 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 99.62 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 99.61 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 99.61 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 99.61 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 99.57 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 99.56 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 99.56 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 99.55 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 99.55 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 99.54 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 99.51 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 99.49 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 99.49 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 99.49 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 99.45 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 99.44 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 99.44 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 99.41 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 99.41 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 99.41 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 99.41 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 99.41 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 99.41 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 99.4 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 99.4 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 99.4 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.39 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 99.39 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.39 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 99.39 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 99.38 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 99.38 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 99.38 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 99.37 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 99.37 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 99.37 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 99.37 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 99.36 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 99.36 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 99.36 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 99.36 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 99.36 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 99.36 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 99.35 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 99.35 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 99.34 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 99.34 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 99.34 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 99.34 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 99.33 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.33 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 99.33 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 99.33 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 99.33 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 99.33 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 99.32 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.32 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.32 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 99.32 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 99.32 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 99.32 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 99.32 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 99.32 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 99.31 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 99.31 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 99.31 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 99.31 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 99.31 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 99.31 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 99.29 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 99.29 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 99.29 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.29 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 99.28 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 99.28 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 99.28 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 99.28 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 99.28 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 99.28 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 99.27 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 99.27 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 99.27 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.27 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 99.27 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 99.27 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 99.27 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 99.27 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 99.27 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 99.26 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 99.26 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 99.26 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 99.26 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 99.26 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 99.26 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 99.25 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 99.25 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 99.25 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 99.25 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 99.25 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 99.25 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 99.25 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 99.25 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 99.24 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 99.24 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 99.24 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 99.24 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 99.24 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 99.24 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 99.24 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 99.24 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 99.23 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 99.23 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 99.23 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 99.23 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 99.23 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 99.23 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 99.23 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 99.23 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 99.22 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 99.22 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 99.22 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 99.22 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 99.22 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 99.21 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 99.21 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 99.21 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 99.21 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 99.21 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 99.21 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 99.21 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 99.2 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 99.2 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 99.2 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 99.2 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 99.2 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 99.19 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 99.19 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 99.18 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 99.18 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 99.18 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 99.18 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 99.17 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 99.17 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.17 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 99.17 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 99.16 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 99.16 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 99.16 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 99.16 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 99.16 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 99.15 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 99.15 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 99.15 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 99.15 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 99.14 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 99.14 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 99.14 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 99.14 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 99.13 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 99.13 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 99.13 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 99.12 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 99.12 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 99.12 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 99.12 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 99.12 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 99.12 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 99.12 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 99.12 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 99.12 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 99.11 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 99.1 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 99.09 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 99.09 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 99.09 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 99.08 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 99.06 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 99.06 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 99.06 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 99.05 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 99.05 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 99.04 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 99.03 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 99.03 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 99.02 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 99.01 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 98.99 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 98.98 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 98.98 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 98.97 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 98.97 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 98.96 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 98.96 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 98.95 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 98.94 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 98.93 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.92 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 98.92 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 98.9 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 98.89 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 98.86 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 98.85 | |
| 1y7t_A | 327 | Malate dehydrogenase; NAD-dependent-MDH-NADPH comp | 98.82 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 98.79 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 98.77 | |
| 1d7o_A | 297 | Enoyl-[acyl-carrier protein] reductase (NADH) PRE; | 98.71 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 98.7 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 98.7 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 98.66 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 98.63 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.59 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 98.58 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.5 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.47 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 98.46 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.44 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.42 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 98.41 | |
| 2ptg_A | 319 | Enoyl-acyl carrier reductase; apicomplexa, enoyl ( | 98.34 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 98.29 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 98.27 | |
| 2o2s_A | 315 | Enoyl-acyl carrier reductase; enoyl reductase, tri | 98.26 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 98.15 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 98.01 | |
| 2uv9_A | 1878 | Fatty acid synthase alpha subunits; fungal, dehydr | 97.9 | |
| 2uv8_A | 1887 | Fatty acid synthase subunit alpha (FAS2); fatty ac | 97.47 | |
| 2pff_A | 1688 | Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl | 97.43 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.06 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 97.01 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 96.98 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 96.96 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 96.87 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 96.81 | |
| 1b8p_A | 329 | Protein (malate dehydrogenase); oxidoreductase; 1. | 95.75 | |
| 1smk_A | 326 | Malate dehydrogenase, glyoxysomal; tricarboxylic c | 94.7 | |
| 1hye_A | 313 | L-lactate/malate dehydrogenase; nucleotide binding | 94.58 | |
| 1o6z_A | 303 | MDH, malate dehydrogenase; halophilic, ION-binding | 93.75 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 92.1 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 91.01 |
| >4dqv_A Probable peptide synthetase NRP (peptide synthase; GXXGXXG motif, rossmann fold, short chain dehydrogenase/REDU family, reductase; 2.30A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.96 E-value=2.1e-28 Score=267.86 Aligned_cols=266 Identities=21% Similarity=0.299 Sum_probs=187.3
Q ss_pred CeEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCC
Q psy5825 237 GGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLR 316 (596)
Q Consensus 237 ~~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~ 316 (596)
.+|+|++|......+.++|.+.+.......+.. +......++.++.|||+++.+||+.+.+..+++++|+||||||.++
T Consensus 101 ~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~v~~v~~Dl~~~~~gld~~~~~~~~~~~D~Vih~Aa~~~ 179 (478)
T 4dqv_A 101 GRLICLVRAESDEDARRRLEKTFDSGDPELLRH-FKELAADRLEVVAGDKSEPDLGLDQPMWRRLAETVDLIVDSAAMVN 179 (478)
T ss_dssp CEEEEEECSSSHHHHHHHHHGGGCSSCHHHHHH-HHHHHTTTEEEEECCTTSGGGGCCHHHHHHHHHHCCEEEECCSSCS
T ss_pred CEEEEEECCCCcHHHHHHHHHHHHhcchhhhhh-hhhhccCceEEEEeECCCcccCCCHHHHHHHHcCCCEEEECccccC
Confidence 589999998776667777777654321111111 1111227899999999999999999999999999999999999998
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhh
Q psy5825 317 FDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSS 394 (596)
Q Consensus 317 ~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p 394 (596)
+ .++..++.+||.||.+|+++|.. .++++|||+||++||+... .+.|+. ......+
T Consensus 180 ~-~~~~~~~~~Nv~gt~~ll~aa~~-~~~~~~V~iSS~~v~~~~~~~~~~E~~--------------------~~~p~~~ 237 (478)
T 4dqv_A 180 A-FPYHELFGPNVAGTAELIRIALT-TKLKPFTYVSTADVGAAIEPSAFTEDA--------------------DIRVISP 237 (478)
T ss_dssp B-SSCCEEHHHHHHHHHHHHHHHTS-SSCCCEEEEEEGGGGTTSCTTTCCSSS--------------------CHHHHCC
T ss_pred C-cCHHHHHHHHHHHHHHHHHHHHh-CCCCeEEEEeehhhcCccCCCCcCCcc--------------------cccccCc
Confidence 7 66667889999999999999998 6889999999999998633 222221 0111111
Q ss_pred --hhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHH-hccceE-eec
Q psy5825 395 --MLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAA-LGLIHT-FYA 468 (596)
Q Consensus 395 --~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~-~g~~~~-~~~ 468 (596)
..... +.++|+.||+++|++++.++ .|++++|+|||+|||+... .|..+....+..++..+. .|.++. +++
T Consensus 238 ~~~~~~~-~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ivRpg~v~G~~~~--~g~~~~~~~~~~l~~~~~~~g~~P~~~~~ 314 (478)
T 4dqv_A 238 TRTVDGG-WAGGYGTSKWAGEVLLREANDLCALPVAVFRCGMILADTSY--AGQLNMSDWVTRMVLSLMATGIAPRSFYE 314 (478)
T ss_dssp EEECCTT-SEECHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECCSSS--SSCCCTTBHHHHHHHHHHHHCEEESCSBC
T ss_pred ccccccc-cccchHHHHHHHHHHHHHHHHHhCCCeEEEECceeeCCCcc--CCcCCHHHHHHHHHHHHHHcCcccccccc
Confidence 01112 45789999999999999987 6999999999999997541 121111111223333322 243322 221
Q ss_pred C------CCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 469 K------HDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 469 ~------~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
. +...++||||||||++++.++....... ...+++||++++...+++|.+|+++|.+++.
T Consensus 315 ~~~~G~~~~~~~~~v~vdDvA~ai~~~~~~~~~~~--------------~~~~~~ynv~~~~~~~~s~~el~~~l~~~g~ 380 (478)
T 4dqv_A 315 PDSEGNRQRAHFDGLPVTFVAEAIAVLGARVAGSS--------------LAGFATYHVMNPHDDGIGLDEYVDWLIEAGY 380 (478)
T ss_dssp CCTTSCCCCCCCCEEEHHHHHHHHHHHHHTTC-CC--------------CCSEEEEEESCCCCSSCSHHHHHHHHHHTTC
T ss_pred cccccccccceeeeeeHHHHHHHHHHHHhhcccCC--------------CCCCceEEecCCCCCCcCHHHHHHHHHHcCC
Confidence 1 2678999999999999999987532100 0357899999993233999999999999754
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=99.95 E-value=3.7e-27 Score=246.92 Aligned_cols=207 Identities=16% Similarity=0.101 Sum_probs=164.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.|||+++ +.+..+++++|+||||||...... ....++.+|+.||.+|+++|.. .++++|||+||
T Consensus 79 ~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~v~~SS 151 (351)
T 3ruf_A 79 SRFCFIEGDIRDL------TTCEQVMKGVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKN-AQVQSFTYAAS 151 (351)
T ss_dssp TTEEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred CceEEEEccCCCH------HHHHHHhcCCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEec
Confidence 6899999999965 458899999999999999876443 3456889999999999999998 57899999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
++|||... .+.|+... . ..+.|+.||+++|++++.++ .|++++|+|
T Consensus 152 ~~vyg~~~~~~~~E~~~~-----------------------------~-p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR 201 (351)
T 3ruf_A 152 SSTYGDHPALPKVEENIG-----------------------------N-PLSPYAVTKYVNEIYAQVYARTYGFKTIGLR 201 (351)
T ss_dssp GGGGTTCCCSSBCTTCCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred HHhcCCCCCCCCccCCCC-----------------------------C-CCChhHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 99998643 23332110 1 34689999999999999887 799999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
|++|||+...+...+. .....++..+..|....+++++...++||||+|||++++.++.....
T Consensus 202 p~~v~G~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~-------------- 264 (351)
T 3ruf_A 202 YFNVFGRRQDPNGAYA---AVIPKWTAAMLKGDDVYINGDGETSRDFCYIDNVIQMNILSALAKDS-------------- 264 (351)
T ss_dssp ECSEESTTCCCCSTTC---CHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG--------------
T ss_pred eCceeCcCCCCCcchh---hHHHHHHHHHHcCCCcEEeCCCCeEEeeEEHHHHHHHHHHHHhhccc--------------
Confidence 9999998764321110 11234555566676666778899999999999999999998876211
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||+++ .++++.||++.+.+.++
T Consensus 265 ---~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 292 (351)
T 3ruf_A 265 ---AKDNIYNVAVG--DRTTLNELSGYIYDELN 292 (351)
T ss_dssp ---GCSEEEEESCS--CCEEHHHHHHHHHHHHH
T ss_pred ---cCCCEEEeCCC--CcccHHHHHHHHHHHhC
Confidence 25789999999 89999999999999988
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.8e-26 Score=241.21 Aligned_cols=239 Identities=20% Similarity=0.164 Sum_probs=176.8
Q ss_pred EEEEeCCCCcccHHHHHHHHhhhh----hH--HHhh-hhhhh----h-hcCcEEEEEeccCCCCCCCCHHHHHHHhcc--
Q psy5825 239 IYILLRSKKNKTVQERLAEQFKDE----LF--DRLK-NEQAD----I-LQRKVHIISGDISQPSLGISSHDQQFIQHH-- 304 (596)
Q Consensus 239 V~~LvR~~~~~~~~~Rl~~~~~~~----~~--~~l~-~~~~~----~-~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~-- 304 (596)
-.+||.+.+|.-+..-+..++..+ ++ ++.. ..... . ...++.++.|||+++ +.+..++++
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~~ 98 (346)
T 4egb_A 25 MNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVKSIQDHPNYYFVKGEIQNG------ELLEHVIKERD 98 (346)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCH------HHHHHHHHHHT
T ss_pred CeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhhhhccCCCeEEEEcCCCCH------HHHHHHHhhcC
Confidence 347788887777776666666532 11 1000 00000 0 014899999999865 458888887
Q ss_pred ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc---cccccccCCCCChHHHH
Q psy5825 305 IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE---DIQEEFYPPLFSYEDLA 378 (596)
Q Consensus 305 vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~---~i~E~~~~~~~~~~~~~ 378 (596)
+|+||||||.+... ..+..++.+|+.||.+|+++|.. .++++|||+||++|||... .+.|+...
T Consensus 99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~v~~SS~~vy~~~~~~~~~~E~~~~--------- 168 (346)
T 4egb_A 99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKK-YPHIKLVQVSTDEVYGSLGKTGRFTEETPL--------- 168 (346)
T ss_dssp CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHH-STTSEEEEEEEGGGGCCCCSSCCBCTTSCC---------
T ss_pred CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHh-cCCCEEEEeCchHHhCCCCcCCCcCCCCCC---------
Confidence 99999999987654 34456889999999999999999 5789999999999999642 23332110
Q ss_pred HHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHH
Q psy5825 379 HVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAA 456 (596)
Q Consensus 379 ~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~ 456 (596)
. ..+.|+.||+++|++++.++ .|++++|+||++|||+...+. .....++.
T Consensus 169 --------------------~-p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~G~~~~~~-------~~~~~~~~ 220 (346)
T 4egb_A 169 --------------------A-PNSPYSSSKASADMIALAYYKTYQLPVIVTRCSNNYGPYQYPE-------KLIPLMVT 220 (346)
T ss_dssp --------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCCTT-------SHHHHHHH
T ss_pred --------------------C-CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeecceeCcCCCcc-------chHHHHHH
Confidence 1 33679999999999999987 699999999999999865321 12334555
Q ss_pred HHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHH
Q psy5825 457 GAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNS 536 (596)
Q Consensus 457 ~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~ 536 (596)
.+..|....+++++...++||||+|+|++++.++.... .+++|||+++ .++++.+|++.
T Consensus 221 ~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~-------------------~g~~~~i~~~--~~~s~~e~~~~ 279 (346)
T 4egb_A 221 NALEGKKLPLYGDGLNVRDWLHVTDHCSAIDVVLHKGR-------------------VGEVYNIGGN--NEKTNVEVVEQ 279 (346)
T ss_dssp HHHTTCCCEEETTSCCEECEEEHHHHHHHHHHHHHHCC-------------------TTCEEEECCS--CCEEHHHHHHH
T ss_pred HHHcCCCceeeCCCCeEEeeEEHHHHHHHHHHHHhcCC-------------------CCCEEEECCC--CceeHHHHHHH
Confidence 56666655667888999999999999999999987642 4789999999 88999999999
Q ss_pred HHHHcc
Q psy5825 537 VQAAGK 542 (596)
Q Consensus 537 l~~~~~ 542 (596)
+.+.++
T Consensus 280 i~~~~g 285 (346)
T 4egb_A 280 IITLLG 285 (346)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 999988
|
| >4b8w_A GDP-L-fucose synthase; oxidoreductase; HET: NAP GDP; 2.75A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.94 E-value=4.7e-27 Score=241.29 Aligned_cols=242 Identities=13% Similarity=0.075 Sum_probs=174.8
Q ss_pred EEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCCh
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRF 317 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~ 317 (596)
.+||.+.+|.-+..-+..++..+. . ..... ..+.++.||++++ +.+..++++ +|+||||||.+..
T Consensus 8 ~vlVtGatG~iG~~l~~~L~~~g~----~--~~~~~-~~~~~~~~D~~d~------~~~~~~~~~~~~d~Vih~A~~~~~ 74 (319)
T 4b8w_A 8 RILVTGGSGLVGKAIQKVVADGAG----L--PGEDW-VFVSSKDADLTDT------AQTRALFEKVQPTHVIHLAAMVGG 74 (319)
T ss_dssp EEEEETCSSHHHHHHHHHHHTTTC----C--TTCEE-EECCTTTCCTTSH------HHHHHHHHHSCCSEEEECCCCCCC
T ss_pred eEEEECCCcHHHHHHHHHHHhcCC----c--ccccc-cccCceecccCCH------HHHHHHHhhcCCCEEEECceeccc
Confidence 467888888777766666665332 0 00011 2344557888854 458888887 9999999998752
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHh
Q psy5825 318 ----DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEI 391 (596)
Q Consensus 318 ----~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~ 391 (596)
......++.+|+.||.+|+++|.. .++++|||+||++|||... .+.|+... .
T Consensus 75 ~~~~~~~~~~~~~~nv~gt~~ll~a~~~-~~~~~~v~~SS~~vyg~~~~~~~~E~~~~---------------------~ 132 (319)
T 4b8w_A 75 LFRNIKYNLDFWRKNVHMNDNVLHSAFE-VGARKVVSCLSTCIFPDKTTYPIDETMIH---------------------N 132 (319)
T ss_dssp HHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEECCGGGSCSSCCSSBCGGGGG---------------------B
T ss_pred ccccccCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEEcchhhcCCCCCCCccccccc---------------------c
Confidence 234567899999999999999998 5789999999999998643 33332100 0
Q ss_pred hhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHH----HHhccceE
Q psy5825 392 LSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAG----AALGLIHT 465 (596)
Q Consensus 392 ~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~----~~~g~~~~ 465 (596)
.+. .. ...+|+.||+++|++++.++ .|++++|+||++|||+...+..+. ......++.. +..|....
T Consensus 133 -~~~--~p-~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~Gp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~ 205 (319)
T 4b8w_A 133 -GPP--HN-SNFGYSYAKRMIDVQNRAYFQQYGCTFTAVIPTNVFGPHDNFNIED---GHVLPGLIHKVHLAKSSGSALT 205 (319)
T ss_dssp -SCC--CS-SSHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCCCTTT---SCHHHHHHHHHHHHHHHTCCEE
T ss_pred -CCC--CC-CcchHHHHHHHHHHHHHHHHHhhCCCEEEEeeccccCCCCCCCCcc---ccccHHHHHHHHHHhccCCceE
Confidence 000 00 11269999999999999987 799999999999999876432111 1112233433 45565556
Q ss_pred eecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 466 FYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 466 ~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+++++...++||||+|||++++.++..... ..+++||++++ .++++.+|++.+.+.++
T Consensus 206 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~-----------------~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 263 (319)
T 4b8w_A 206 VWGTGNPRRQFIYSLDLAQLFIWVLREYNE-----------------VEPIILSVGEE--DEVSIKEAAEAVVEAMD 263 (319)
T ss_dssp EESCSCCEECEEEHHHHHHHHHHHHHHCCC-----------------SSCEEECCCGG--GCEEHHHHHHHHHHHTT
T ss_pred EeCCCCeeEEEEeHHHHHHHHHHHHhcccc-----------------CCceEEEecCC--CceeHHHHHHHHHHHhC
Confidence 778889999999999999999999876432 24679999998 89999999999999988
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=99.94 E-value=1.1e-26 Score=239.31 Aligned_cols=198 Identities=17% Similarity=0.082 Sum_probs=160.3
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTH 357 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~ 357 (596)
++.++.||++ +. .+..+++++|+||||||..... ....++.+|+.||.+|+++|.. .++++|||+||++||
T Consensus 43 ~~~~~~~Dl~-~~------~~~~~~~~~d~Vih~a~~~~~~-~~~~~~~~n~~~~~~ll~a~~~-~~~~r~v~~SS~~vy 113 (311)
T 3m2p_A 43 DYEYRVSDYT-LE------DLINQLNDVDAVVHLAATRGSQ-GKISEFHDNEILTQNLYDACYE-NNISNIVYASTISAY 113 (311)
T ss_dssp CCEEEECCCC-HH------HHHHHTTTCSEEEECCCCCCSS-SCGGGTHHHHHHHHHHHHHHHH-TTCCEEEEEEEGGGC
T ss_pred ceEEEEcccc-HH------HHHHhhcCCCEEEEccccCCCC-ChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEccHHHh
Confidence 6889999998 54 4888999999999999998765 4556789999999999999998 579999999999999
Q ss_pred cCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCcc
Q psy5825 358 SYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIV 433 (596)
Q Consensus 358 g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V 433 (596)
|... .+.|+..+ . ..+.|+.||+++|++++.++ .|++++|+||++|
T Consensus 114 g~~~~~~~~E~~~~-----------------------------~-p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v 163 (311)
T 3m2p_A 114 SDETSLPWNEKELP-----------------------------L-PDLMYGVSKLACEHIGNIYSRKKGLCIKNLRFAHL 163 (311)
T ss_dssp CCGGGCSBCTTSCC-----------------------------C-CSSHHHHHHHHHHHHHHHHHHHSCCEEEEEEECEE
T ss_pred CCCCCCCCCCCCCC-----------------------------C-CCchhHHHHHHHHHHHHHHHHHcCCCEEEEeeCce
Confidence 8643 23332110 1 33689999999999999987 7999999999999
Q ss_pred ccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCC
Q psy5825 434 VSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRT 513 (596)
Q Consensus 434 ~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (596)
||+...+. .....++..+..|....++++++..++||||+|||++++.++....
T Consensus 164 ~G~~~~~~-------~~~~~~~~~~~~~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~~------------------- 217 (311)
T 3m2p_A 164 YGFNEKNN-------YMINRFFRQAFHGEQLTLHANSVAKREFLYAKDAAKSVIYALKQEK------------------- 217 (311)
T ss_dssp ECSCC--C-------CHHHHHHHHHHTCCCEEESSBCCCCEEEEEHHHHHHHHHHHTTCTT-------------------
T ss_pred eCcCCCCC-------CHHHHHHHHHHcCCCeEEecCCCeEEceEEHHHHHHHHHHHHhcCC-------------------
Confidence 99865321 1234455556667666677888999999999999999999886532
Q ss_pred CCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 514 DPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 514 ~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++++.+|++.+.+.++
T Consensus 218 ~~~~~~i~~~--~~~s~~e~~~~i~~~~g 244 (311)
T 3m2p_A 218 VSGTFNIGSG--DALTNYEVANTINNAFG 244 (311)
T ss_dssp CCEEEEECCS--CEECHHHHHHHHHHHTT
T ss_pred CCCeEEeCCC--CcccHHHHHHHHHHHhC
Confidence 4779999999 89999999999999988
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.94 E-value=2.8e-25 Score=231.54 Aligned_cols=211 Identities=18% Similarity=0.130 Sum_probs=160.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.+||+++ +.+..+++ ++|+||||||...... ....++.+|+.||.+|+++|.. .++++|||+
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~ 127 (341)
T 3enk_A 55 KTPAFHETDVSDE------RALARIFDAHPITAAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRE-RAVKRIVFS 127 (341)
T ss_dssp CCCEEECCCTTCH------HHHHHHHHHSCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCceEEEeecCCH------HHHHHHHhccCCcEEEECccccccCccccChHHHHHHHHHHHHHHHHHHHh-CCCCEEEEE
Confidence 5789999999965 45888887 8999999999876433 3346889999999999999998 578999999
Q ss_pred cCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---cCCCEE
Q psy5825 352 STLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---YKLPLA 426 (596)
Q Consensus 352 SS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---~gl~~~ 426 (596)
||+++||... .++|+... . ..+.|+.||+++|++++.++ .+++++
T Consensus 128 SS~~~~g~~~~~~~~e~~~~-----------------------------~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ 177 (341)
T 3enk_A 128 SSATVYGVPERSPIDETFPL-----------------------------S-ATNPYGQTKLMAEQILRDVEAADPSWRVA 177 (341)
T ss_dssp EEGGGBCSCSSSSBCTTSCC-----------------------------B-CSSHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred ecceEecCCCCCCCCCCCCC-----------------------------C-CCChhHHHHHHHHHHHHHHhhcCCCceEE
Confidence 9999998643 23332110 0 23679999999999999877 459999
Q ss_pred EecCCccccCCCCCccccCCC--CCCcHHHHHHHHhccc--eEeec------CCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNN--LYGPGGAAAGAALGLI--HTFYA------KHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~--~~~~~~l~~~~~~g~~--~~~~~------~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
|+||++|||+...+..|.... ......++.....+.. ..++| ++...++||||+|||++++.++......
T Consensus 178 ~lRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~ 257 (341)
T 3enk_A 178 TLRYFNPVGAHESGLIGEDPAGIPNNLMPYVAQVAVGKLEKLRVFGSDYPTPDGTGVRDYIHVVDLARGHIAALDALERR 257 (341)
T ss_dssp EEEECEEECCCTTSSCCCCCSSSCSSHHHHHHHHHHTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHHHH
T ss_pred EEeeccccCCccccccCCCcccCccchHHHHHHHHhcCCCceEEeCCccCCCCCCeeEeeEEHHHHHHHHHHHHHhhhcC
Confidence 999999999976543332211 1223344455454432 23445 6788999999999999999998763221
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||+++ .++++.||++.|.+.++
T Consensus 258 ----------------~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 285 (341)
T 3enk_A 258 ----------------DASLTVNLGTG--RGYSVLEVVRAFEKASG 285 (341)
T ss_dssp ----------------TSCEEEEESCS--CCEEHHHHHHHHHHHHC
T ss_pred ----------------CcceEEEeCCC--CceeHHHHHHHHHHHhC
Confidence 25789999999 89999999999999888
|
| >4f6l_B AUSA reductase domain protein; thioester reductase, oxidoreductase; 3.86A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.94 E-value=5.8e-26 Score=250.31 Aligned_cols=238 Identities=16% Similarity=0.164 Sum_probs=167.8
Q ss_pred cCeEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCC-CCCCCCHHHHHHHhccccEEEEcCcc
Q psy5825 236 VGGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQ-PSLGISSHDQQFIQHHIHVIIHAAAS 314 (596)
Q Consensus 236 v~~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~-~~lGL~~~~~~~l~~~vd~ViH~AA~ 314 (596)
..+|+||+|......+..|+.+.+.......+ ......+|.++.|||++ +.++ +..++|+||||||.
T Consensus 174 g~~V~~l~R~~~~~~~~~~l~~~l~~~~~~~~----~~~~~~~v~~v~~Dl~d~~~l~--------~~~~~D~Vih~Aa~ 241 (508)
T 4f6l_B 174 SHRIYCFIRADNEEIAWYKLMTNLNDYFSEET----VEMMLSNIEVIVGDFECMDDVV--------LPENMDTIIHAGAR 241 (508)
T ss_dssp EEEEEEEEESSSHHHHHHHHHHHHHHHSCHHH----HHHHSTTEEEEEEBTTBCSSCC--------CSSCCSEEEECCCC
T ss_pred CCEEEEEECCCChHHHHHHHHHHHHHhccccc----chhccCceEEEecCCcccccCC--------CccCCCEEEECCce
Confidence 35899999987666677777776543210000 11122789999999999 5554 56799999999999
Q ss_pred CChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc-------cccccccCCCCChHHHHHHHhcCChH
Q psy5825 315 LRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE-------DIQEEFYPPLFSYEDLAHVMQTTNQE 387 (596)
Q Consensus 315 v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~-------~i~E~~~~~~~~~~~~~~~~~~~~e~ 387 (596)
+++..++..++.+||.||.+|+++|.. ++++|||+||++| |... .+.|+...
T Consensus 242 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~--~~~~~v~iSS~~v-G~~~~~~~~~~~~~E~~~~------------------ 300 (508)
T 4f6l_B 242 TDHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVY------------------ 300 (508)
T ss_dssp --------CCHHHHHHHHHHHHHHHHT--TTCEEEEEEESCT-TSEECTTCSCCEECTTCSC------------------
T ss_pred ecCCCCHHHHhhhHHHHHHHHHHHHHh--CCCcEEEeCChhh-ccCCccCCcCccccccccc------------------
Confidence 988888888999999999999999998 6799999999999 5321 12221100
Q ss_pred HHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCC-CC--CCcHHHHHHHHhccc
Q psy5825 388 ELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSN-NL--YGPGGAAAGAALGLI 463 (596)
Q Consensus 388 ~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~-~~--~~~~~l~~~~~~g~~ 463 (596)
.... ..++|+.||+++|++++.+. .|++++|+||++|||+... +|.. +. ..+..++..+..+
T Consensus 301 --------~~~~-~~~~Y~~sK~~~E~~~~~~~~~gi~~~ilRp~~v~G~~~~---~~~~~~~~~~~~~~~i~~~~~~-- 366 (508)
T 4f6l_B 301 --------KGQL-LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNG---RWHMRNIKTNRFSMVMNDLLQL-- 366 (508)
T ss_dssp --------SSBC-CCSHHHHHHHHHHHHHHHHHHTTCEEEEEEECCEESCSSS---CCCCTTCTTCHHHHHHHHHTTC--
T ss_pred --------cccc-CCCcHHHHHHHHHHHHHHHHHcCCCEEEEecceeccCCCC---CcccCCcchHHHHHHHHHHHHc--
Confidence 0001 34789999999999999988 8999999999999998763 3311 11 1122333333332
Q ss_pred eEee-cCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHc
Q psy5825 464 HTFY-AKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAG 541 (596)
Q Consensus 464 ~~~~-~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~ 541 (596)
..++ ++++..++|+||||||++++.++.... .+++||++++ .+++|.+|+..|.+++
T Consensus 367 ~~~~~~~g~~~~~~v~v~DvA~ai~~~~~~~~-------------------~~~~~nl~~~--~~~s~~el~~~i~~~~ 424 (508)
T 4f6l_B 367 DCIGVSMAEMPVDFSFVDTTARQIVALAQVNT-------------------PQIIYHVLSP--NKMPVKSLLECVKRKE 424 (508)
T ss_dssp SEEETTGGGSEEECEEHHHHHHHHHHHTTBCC-------------------SCSEEEESCS--CEEEHHHHHHHHHSSC
T ss_pred CCCCCCccCceEEEEcHHHHHHHHHHHHhCCC-------------------CCCEEEeCCC--CCCCHHHHHHHHHHcC
Confidence 2333 335789999999999999999986532 4789999999 8999999999998754
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.7e-26 Score=241.32 Aligned_cols=254 Identities=13% Similarity=0.128 Sum_probs=178.6
Q ss_pred EEEeCCCCcccHHHHHHHHhhh-h--hH--HHhhhhhhhhh-cCcEEEEEeccC-CCCCCCCHHHHHHHhccccEEEEcC
Q psy5825 240 YILLRSKKNKTVQERLAEQFKD-E--LF--DRLKNEQADIL-QRKVHIISGDIS-QPSLGISSHDQQFIQHHIHVIIHAA 312 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~-~--~~--~~l~~~~~~~~-~~rv~~v~GDl~-~~~lGL~~~~~~~l~~~vd~ViH~A 312 (596)
.+||.+.+|.-+..-+..++.. . ++ ++-........ ..+++++.|||+ ++ ..+..++.++|+|||||
T Consensus 26 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~------~~~~~~~~~~d~Vih~A 99 (372)
T 3slg_A 26 KVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINK------EWVEYHVKKCDVILPLV 99 (372)
T ss_dssp EEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCH------HHHHHHHHHCSEEEECB
T ss_pred EEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCH------HHHHHHhccCCEEEEcC
Confidence 3566666666666555555543 1 11 11000001111 158999999998 44 45888889999999999
Q ss_pred ccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChH
Q psy5825 313 ASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQE 387 (596)
Q Consensus 313 A~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~ 387 (596)
|...... +...++.+|+.||.+|+++|... + ++|||+||++|||... .+.|+..+.+.
T Consensus 100 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~-~-~~~v~~SS~~vyg~~~~~~~~e~~~~~~~--------------- 162 (372)
T 3slg_A 100 AIATPATYVKQPLRVFELDFEANLPIVRSAVKY-G-KHLVFPSTSEVYGMCADEQFDPDASALTY--------------- 162 (372)
T ss_dssp CCCCHHHHHHCHHHHHHHHTTTTHHHHHHHHHH-T-CEEEEECCGGGGBSCCCSSBCTTTCCEEE---------------
T ss_pred ccccHHHHhhCHHHHHHHHHHHHHHHHHHHHHh-C-CcEEEeCcHHHhCCCCCCCCCcccccccc---------------
Confidence 9887543 45568899999999999999984 5 8999999999999743 23332211000
Q ss_pred HHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCCCCCC-cHHHHHHHHhccceE
Q psy5825 388 ELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYG-PGGAAAGAALGLIHT 465 (596)
Q Consensus 388 ~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~-~~~l~~~~~~g~~~~ 465 (596)
.| ... ..+.|+.||+++|++++.++ .|++++|+||++|||+...+..++...... ...++..+..|....
T Consensus 163 -----~p--~~~-p~~~Y~~sK~~~E~~~~~~~~~g~~~~ilRp~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 234 (372)
T 3slg_A 163 -----GP--INK-PRWIYACSKQLMDRVIWGYGMEGLNFTLFRPFNWIGPGLDSIYTPKEGSSRVVTQFLGHIVRGENIS 234 (372)
T ss_dssp -----CC--TTC-TTHHHHHHHHHHHHHHHHHHTTTCEEEEEEECSEECSSCCCTTCSBSCSCHHHHHHHHHHHHTCCEE
T ss_pred -----CC--CCC-CCCcHHHHHHHHHHHHHHHHHCCCCEEEEccccccCCCcccccccccccchHHHHHHHHHHcCCCcE
Confidence 00 001 23579999999999999988 689999999999999976543222111111 233445556666666
Q ss_pred eecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccC-CCCCcccHHHHHHHHHHHcc
Q psy5825 466 FYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSI-SSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 466 ~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~-~~~~~vt~~el~~~l~~~~~ 542 (596)
+++++...++||||+|||++++.++...... ..+++|||++ + .++|+.||++.|.+.++
T Consensus 235 ~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~----------------~~~~~~ni~~~~--~~~s~~e~~~~i~~~~g 294 (372)
T 3slg_A 235 LVDGGSQKRAFTYVDDGISALMKIIENSNGV----------------ATGKIYNIGNPN--NNFSVRELANKMLELAA 294 (372)
T ss_dssp EGGGGCCEEECEEHHHHHHHHHHHHHCGGGT----------------TTTEEEEECCTT--CEEEHHHHHHHHHHHHH
T ss_pred EeCCCceEEEEEEHHHHHHHHHHHHhcccCc----------------CCCceEEeCCCC--CCccHHHHHHHHHHHhC
Confidence 7788899999999999999999999765310 1478999999 5 68999999999999887
|
| >3ehe_A UDP-glucose 4-epimerase (GALE-1); PSI-II, NYSGXRC, ST genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; HET: NAD; 1.87A {Archaeoglobus fulgidus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.93 E-value=1.7e-25 Score=230.59 Aligned_cols=199 Identities=14% Similarity=0.087 Sum_probs=157.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.+|+++ .. +..++.++|+||||||.... ...+..++++|+.||.+|+++|.. .++++|||+||
T Consensus 43 ~~~~~~~~Dl~~-~~------~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~nv~~~~~l~~~~~~-~~~~~iv~~SS 114 (313)
T 3ehe_A 43 EAARLVKADLAA-DD------IKDYLKGAEEVWHIAANPDVRIGAENPDEIYRNNVLATYRLLEAMRK-AGVSRIVFTST 114 (313)
T ss_dssp TTEEEECCCTTT-SC------CHHHHTTCSEEEECCCCCCCC-CCCCHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEECC
T ss_pred CCcEEEECcCCh-HH------HHHHhcCCCEEEECCCCCChhhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEeCc
Confidence 678999999997 33 57788899999999997532 245677899999999999999998 47889999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
++|||... .++|+. | .. ..+.|+.||+++|.+++.++ .|++++|+|
T Consensus 115 ~~vyg~~~~~~~~E~~--------------------------~---~~-~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilR 164 (313)
T 3ehe_A 115 STVYGEAKVIPTPEDY--------------------------P---TH-PISLYGASKLACEALIESYCHTFDMQAWIYR 164 (313)
T ss_dssp GGGGCSCSSSSBCTTS--------------------------C---CC-CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred hHHhCcCCCCCCCCCC--------------------------C---CC-CCCHHHHHHHHHHHHHHHHHHhcCCCEEEEe
Confidence 99998643 222211 0 00 23679999999999999987 799999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhcc-ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGL-IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
|++|||+...+ ..+..++..+..+. ...+++++...++||||+|||++++.++...
T Consensus 165 p~~v~G~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~--------------- 221 (313)
T 3ehe_A 165 FANVIGRRSTH--------GVIYDFIMKLKRNPEELEILGNGEQNKSYIYISDCVDAMLFGLRGD--------------- 221 (313)
T ss_dssp CSCEESTTCCC--------SHHHHHHHHHHHCTTEEEESTTSCCEECCEEHHHHHHHHHHHTTCC---------------
T ss_pred eccccCcCCCc--------ChHHHHHHHHHcCCCceEEeCCCCeEEeEEEHHHHHHHHHHHhccC---------------
Confidence 99999985421 11234555555552 3346788889999999999999999988621
Q ss_pred CCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 509 PIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ .++++.||++.|.+.++
T Consensus 222 ----~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 249 (313)
T 3ehe_A 222 ----ERVNIFNIGSE--DQIKVKRIAEIVCEELG 249 (313)
T ss_dssp ----SSEEEEECCCS--CCEEHHHHHHHHHHHTT
T ss_pred ----CCCceEEECCC--CCeeHHHHHHHHHHHhC
Confidence 24789999999 89999999999999988
|
| >2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.93 E-value=9.3e-25 Score=226.49 Aligned_cols=211 Identities=18% Similarity=0.122 Sum_probs=158.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.||++++ +.+..++. ++|+||||||..... ..+..++.+|+.||.+|+++|.. .++++|||+
T Consensus 44 ~~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~~v~~ 116 (330)
T 2c20_A 44 EGAKFYNGDLRDK------AFLRDVFTQENIEAVMHFAADSLVGVSMEKPLQYYNNNVYGALCLLEVMDE-FKVDKFIFS 116 (330)
T ss_dssp TTSEEEECCTTCH------HHHHHHHHHSCEEEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCcEEEECCCCCH------HHHHHHHhhcCCCEEEECCcccCccccccCHHHHHHHHhHHHHHHHHHHHH-cCCCEEEEe
Confidence 3688999999864 45788887 899999999987643 34566889999999999999998 578999999
Q ss_pred cCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEE
Q psy5825 352 STLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAM 427 (596)
Q Consensus 352 SS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~I 427 (596)
||++|||... .++|+..+ . ..+.|+.||+++|++++.++ .|++++|
T Consensus 117 Ss~~~~~~~~~~~~~E~~~~-----------------------------~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i 166 (330)
T 2c20_A 117 STAATYGEVDVDLITEETMT-----------------------------N-PTNTYGETKLAIEKMLHWYSQASNLRYKI 166 (330)
T ss_dssp CCGGGGCSCSSSSBCTTSCC-----------------------------C-CSSHHHHHHHHHHHHHHHHHHTSSCEEEE
T ss_pred CCceeeCCCCCCCCCcCCCC-----------------------------C-CCChHHHHHHHHHHHHHHHHHHhCCcEEE
Confidence 9999998642 23332110 0 23679999999999999887 6999999
Q ss_pred ecCCccccCCCCCccccCCC-CCCcHHHHHHHHhcc--ceEeec------CCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 428 VRPSIVVSTWKEPIVGWSNN-LYGPGGAAAGAALGL--IHTFYA------KHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 428 lRp~~V~G~~~~p~~G~~~~-~~~~~~l~~~~~~g~--~~~~~~------~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
+||++|||+...+..|.... .......+.....+. ...+++ +++..++||||+|||++++.++......
T Consensus 167 lrp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~~~~~~~~~~~-- 244 (330)
T 2c20_A 167 FRYFNVAGATPNGIIGEDHRPETHLIPLVLQVALGQREKIMMFGDDYNTPDGTCIRDYIHVEDLVAAHFLGLKDLQNG-- 244 (330)
T ss_dssp EECSEEECCCTTCSSCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCCSSSSSSCEECEEEHHHHHHHHHHHHHHHHTT--
T ss_pred EecCcccCCCCcCccccccccccchHHHHHHHHhhcCCCeEEeCCccccCCCceeEeeEeHHHHHHHHHHHHhccccC--
Confidence 99999999865433232111 122233344433332 223444 5678899999999999999998764321
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ .++++.||++.+.+.++
T Consensus 245 --------------~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 272 (330)
T 2c20_A 245 --------------GESDFYNLGNG--NGFSVKEIVDAVREVTN 272 (330)
T ss_dssp --------------CCCEEEECCCT--TCBCHHHHHHHHHHHTT
T ss_pred --------------CCCCeEEeCCC--CCccHHHHHHHHHHHhC
Confidence 13679999998 89999999999999887
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1e-25 Score=235.59 Aligned_cols=242 Identities=13% Similarity=0.100 Sum_probs=173.3
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF 317 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~ 317 (596)
.+||.+.+|.-+..-+..++..+ ++-..+. + . ..++.++.|||+++ ..+..++.++|+||||||...+
T Consensus 21 ~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~--~-~-~~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~ 90 (347)
T 4id9_A 21 MILVTGSAGRVGRAVVAALRTQGRTVRGFDLR--P-S-GTGGEEVVGSLEDG------QALSDAIMGVSAVLHLGAFMSW 90 (347)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCEEEEESS--C-C-SSCCSEEESCTTCH------HHHHHHHTTCSEEEECCCCCCS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCC--C-C-CCCccEEecCcCCH------HHHHHHHhCCCEEEECCcccCc
Confidence 46777777777766666655432 1100000 0 0 14678899999865 4588899999999999998875
Q ss_pred hhh-HHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc----cccccccCCCCChHHHHHHHhcCChHHHHhh
Q psy5825 318 DEL-IQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE----DIQEEFYPPLFSYEDLAHVMQTTNQEELEIL 392 (596)
Q Consensus 318 ~~~-~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~----~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~ 392 (596)
... ...++.+|+.||.+|+++|.. .++++|||+||++|||... .+.|+.
T Consensus 91 ~~~~~~~~~~~nv~~~~~ll~a~~~-~~~~~~V~~SS~~vyg~~~~~~~~~~E~~------------------------- 144 (347)
T 4id9_A 91 APADRDRMFAVNVEGTRRLLDAASA-AGVRRFVFASSGEVYPENRPEFLPVTEDH------------------------- 144 (347)
T ss_dssp SGGGHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEEGGGTTTTSCSSSSBCTTS-------------------------
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECCHHHhCCCCCCCCCcCCCC-------------------------
Confidence 543 367899999999999999998 6899999999999998621 233221
Q ss_pred hhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccc-------------cCCCCCccccCC----CCCCcHH
Q psy5825 393 SSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVV-------------STWKEPIVGWSN----NLYGPGG 453 (596)
Q Consensus 393 ~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~-------------G~~~~p~~G~~~----~~~~~~~ 453 (596)
+ .. ..+.|+.||+++|++++.++ .|++++|+||++|| |+...+...+.. .......
T Consensus 145 -~---~~-~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilRp~~v~~~~~~~~~~~~~~Gp~~~~~~~~~~~~~~~~~~~~~ 219 (347)
T 4id9_A 145 -P---LC-PNSPYGLTKLLGEELVRFHQRSGAMETVILRFSHTQDATELLDEDSFFSGPRFFLRPRIHQQQNFGNAAIAE 219 (347)
T ss_dssp -C---CC-CCSHHHHHHHHHHHHHHHHHHHSSSEEEEEEECEEECGGGTTCTTSSSHHHHHBHHHHHHHHHHHTCHHHHH
T ss_pred -C---CC-CCChHHHHHHHHHHHHHHHHHhcCCceEEEccceEeecccccccccccCCCCcccccccccccccchhHHHH
Confidence 0 01 34689999999999999887 79999999999999 543211000000 0001122
Q ss_pred HHHHHHhccceEeecCCCCcccc----ccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 454 AAAGAALGLIHTFYAKHDKKCDL----IPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 454 l~~~~~~g~~~~~~~~~~~~~d~----ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
++..+..|....+++++...++| |||+|||++++.++..... .+++|||+++ .+++
T Consensus 220 ~~~~~~~~~~~~~~g~~~~~~~~~~~~i~v~Dva~ai~~~~~~~~~------------------~~~~~ni~~~--~~~s 279 (347)
T 4id9_A 220 LLQSRDIGEPSHILARNENGRPFRMHITDTRDMVAGILLALDHPEA------------------AGGTFNLGAD--EPAD 279 (347)
T ss_dssp HHHHHCCSSCCEEEEECTTCCBCEECEEEHHHHHHHHHHHHHCGGG------------------TTEEEEESCS--SCEE
T ss_pred HHHHHHcCCCeEEeCCCCcccCCccCcEeHHHHHHHHHHHhcCccc------------------CCCeEEECCC--Cccc
Confidence 33334445444566778888899 9999999999999976532 4779999999 8999
Q ss_pred HHHHHHHHHHHcc
Q psy5825 530 WLEYMNSVQAAGK 542 (596)
Q Consensus 530 ~~el~~~l~~~~~ 542 (596)
+.||++.+.+.++
T Consensus 280 ~~e~~~~i~~~~g 292 (347)
T 4id9_A 280 FAALLPKIAALTG 292 (347)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999988
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=99.93 E-value=1.4e-24 Score=227.62 Aligned_cols=205 Identities=14% Similarity=0.068 Sum_probs=160.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.||++++ +.+..++.++|+||||||..... ..+..++.+|+.||.+|+++|.. .++++|||+||
T Consensus 81 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~~v~~SS 153 (352)
T 1sb8_A 81 SNFKFIQGDIRNL------DDCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD-AKVQSFTYAAS 153 (352)
T ss_dssp TTEEEEECCTTSH------HHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred CceEEEECCCCCH------HHHHHHhcCCCEEEECCcccCchhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEecc
Confidence 5799999999964 45888899999999999987643 34566889999999999999998 57899999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
+++|+... .+.|+..+ . ..+.|+.||+++|.+++.++ .|++++|+|
T Consensus 154 ~~~~~~~~~~~~~E~~~~-----------------------------~-~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilR 203 (352)
T 1sb8_A 154 SSTYGDHPGLPKVEDTIG-----------------------------K-PLSPYAVTKYVNELYADVFSRCYGFSTIGLR 203 (352)
T ss_dssp GGGGTTCCCSSBCTTCCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred HHhcCCCCCCCCCCCCCC-----------------------------C-CCChhHHHHHHHHHHHHHHHHHcCCCEEEEE
Confidence 99998643 23332110 1 33679999999999999876 699999999
Q ss_pred CCccccCCCCCccccCCCCCC-cHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYG-PGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~-~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
|++|||+...+... +.. ...++..+..|....+++++...++||+|+|||++++.++.....
T Consensus 204 p~~v~G~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~------------- 266 (352)
T 1sb8_A 204 YFNVFGRRQDPNGA----YAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD------------- 266 (352)
T ss_dssp ECCEECTTCCCCST----TCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG-------------
T ss_pred ECceeCcCCCCCcc----hhhHHHHHHHHHHCCCCcEEeCCCCceEeeEEHHHHHHHHHHHHhcccc-------------
Confidence 99999986532110 111 223445555665555678888999999999999999988865211
Q ss_pred CCCCCCCCeEEccCCCCCcccHHHHHHHHHHHc
Q psy5825 509 PIPRTDPPVYNLSISSSYPITWLEYMNSVQAAG 541 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~ 541 (596)
..+++|||+++ .++|+.||++.|.+.+
T Consensus 267 ----~~~~~~ni~~~--~~~s~~e~~~~i~~~~ 293 (352)
T 1sb8_A 267 ----ARNQVYNIAVG--GRTSLNQLFFALRDGL 293 (352)
T ss_dssp ----GCSEEEEESCS--CCEEHHHHHHHHHHHH
T ss_pred ----CCCceEEeCCC--CCccHHHHHHHHHHHH
Confidence 24789999998 8999999999999988
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=99.93 E-value=7.5e-25 Score=236.07 Aligned_cols=237 Identities=16% Similarity=0.148 Sum_probs=164.1
Q ss_pred CeEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCC-CCCCCCHHHHHHHhccccEEEEcCccC
Q psy5825 237 GGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQ-PSLGISSHDQQFIQHHIHVIIHAAASL 315 (596)
Q Consensus 237 ~~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~-~~lGL~~~~~~~l~~~vd~ViH~AA~v 315 (596)
.+|+|++|......+..++.+.+... |... .......++.++.|||++ ..++ ++.++|+||||||.+
T Consensus 94 ~~V~~~~R~~~~~~~~~~l~~~l~~~-~~~~---~~~~~~~~v~~v~~Dl~d~~~l~--------~~~~~d~Vih~A~~~ 161 (427)
T 4f6c_A 94 HRIYCFIRADNEEIAWYKLMTNLNDY-FSEE---TVEMMLSNIEVIVGDFECMDDVV--------LPENMDTIIHAGART 161 (427)
T ss_dssp EEEEEEEECSSHHHHHHHHHHHHHHH-SCHH---HHHHHHTTEEEEEECC---CCCC--------CSSCCSEEEECCCCC
T ss_pred CEEEEEECCCChHHHHHHHHHHHHHh-cccc---ccccccCceEEEeCCCCCcccCC--------CcCCCCEEEECCccc
Confidence 58999999876555677777755432 1100 001112789999999998 4442 567999999999999
Q ss_pred ChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc-------cccccccCCCCChHHHHHHHhcCChHH
Q psy5825 316 RFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE-------DIQEEFYPPLFSYEDLAHVMQTTNQEE 388 (596)
Q Consensus 316 ~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~-------~i~E~~~~~~~~~~~~~~~~~~~~e~~ 388 (596)
++..++..++.+||.||.+|+++|.. ++++|||+||++| |... .+.|+...
T Consensus 162 ~~~~~~~~~~~~Nv~g~~~l~~aa~~--~~~~~v~~SS~~~-G~~~~~~~~~~~~~E~~~~------------------- 219 (427)
T 4f6c_A 162 DHFGDDDEFEKVNVQGTVDVIRLAQQ--HHARLIYVSTISV-GTYFDIDTEDVTFSEADVY------------------- 219 (427)
T ss_dssp -------CHHHHHHHHHHHHHHHHHH--TTCEEEEEEEGGG-GSEECSSCSCCEECTTCSC-------------------
T ss_pred CCCCCHHHHHHHHHHHHHHHHHHHHh--cCCcEEEECchHh-CCCccCCCCCccccccccc-------------------
Confidence 87777888999999999999999998 6799999999999 5421 12221100
Q ss_pred HHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCCCC--CCcHHHHHHHHhccceE
Q psy5825 389 LEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNL--YGPGGAAAGAALGLIHT 465 (596)
Q Consensus 389 ~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~--~~~~~l~~~~~~g~~~~ 465 (596)
.... ..+.|+.||+++|.+++.+. .|++++|+|||+|||+...+. |..+. ..+..++..+..+. .
T Consensus 220 -------~~~~-~~~~Y~~sK~~~E~~~~~~~~~g~~~~ivRpg~v~G~~~~~~--~~~~~~~~~~~~~~~~~~~~~--~ 287 (427)
T 4f6c_A 220 -------KGQL-LTSPYTRSKFYSELKVLEAVNNGLDGRIVRVGNLTSPYNGRW--HMRNIKTNRFSMVMNDLLQLD--C 287 (427)
T ss_dssp -------SSCC-CCSHHHHHHHHHHHHHHHHHHTTCCEEEEEECCEESCSSSCC--CCTTGGGCHHHHHHHHHHHSS--E
T ss_pred -------cCCC-CCCchHHHHHHHHHHHHHHHHcCCCEEEEeCCeeecCCCCCc--cccCcchHHHHHHHHHHHhcC--C
Confidence 0001 34789999999999999988 899999999999999876421 11110 11223333333322 2
Q ss_pred ee-cCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHH
Q psy5825 466 FY-AKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAA 540 (596)
Q Consensus 466 ~~-~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~ 540 (596)
++ +.++..++|+||||||++++.++... ..+++|||+++ .+++|.+|++.|.++
T Consensus 288 ~~~~~~~~~~~~v~v~DvA~ai~~~~~~~-------------------~~g~~~~l~~~--~~~s~~el~~~i~~~ 342 (427)
T 4f6c_A 288 IGVSMAEMPVDFSFVDTTARQIVALAQVN-------------------TPQIIYHVLSP--NKMPVKSLLECVKRK 342 (427)
T ss_dssp EEHHHHTCEECCEEHHHHHHHHHHHTTSC-------------------CCCSEEEESCS--CCEEHHHHHHHHHSS
T ss_pred CCCccccceEEEeeHHHHHHHHHHHHcCC-------------------CCCCEEEecCC--CCCcHHHHHHHHHHc
Confidence 33 33578899999999999999988643 24789999999 899999999999874
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=99.93 E-value=3.2e-25 Score=233.46 Aligned_cols=203 Identities=17% Similarity=0.062 Sum_probs=158.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH-hccccEEEEcCccCChh-hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI-QHHIHVIIHAAASLRFD-ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTL 354 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l-~~~vd~ViH~AA~v~~~-~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~ 354 (596)
.++.++.|||+++. .+..+ ..++|+||||||.+... ..+..++.+|+.||.+|+++|.. .+++ |||+||+
T Consensus 68 ~~~~~~~~Dl~d~~------~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~-~~~~-~V~~SS~ 139 (362)
T 3sxp_A 68 FKGEVIAADINNPL------DLRRLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARS-KKAK-VIYASSA 139 (362)
T ss_dssp CCSEEEECCTTCHH------HHHHHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHH-TTCE-EEEEEEG
T ss_pred cCceEEECCCCCHH------HHHHhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHH-cCCc-EEEeCcH
Confidence 46799999999653 47888 78999999999987643 55677999999999999999998 4666 9999999
Q ss_pred ccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCcc
Q psy5825 355 YTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIV 433 (596)
Q Consensus 355 ~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V 433 (596)
+|||... .+.|+.. .. ..+.|+.||+++|++++.++..++++|+||++|
T Consensus 140 ~vyg~~~~~~~E~~~-----------------------------~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~lR~~~v 189 (362)
T 3sxp_A 140 GVYGNTKAPNVVGKN-----------------------------ES-PENVYGFSKLCMDEFVLSHSNDNVQVGLRYFNV 189 (362)
T ss_dssp GGGCSCCSSBCTTSC-----------------------------CC-CSSHHHHHHHHHHHHHHHTTTTSCEEEEEECSE
T ss_pred HHhCCCCCCCCCCCC-----------------------------CC-CCChhHHHHHHHHHHHHHHhccCCEEEEEeCce
Confidence 9998644 2333210 01 346799999999999999884499999999999
Q ss_pred ccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCC
Q psy5825 434 VSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRT 513 (596)
Q Consensus 434 ~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (596)
||+...+...+ ......++..+..|....+++++...++||||+|||++++.++... .
T Consensus 190 ~Gp~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~ai~~~~~~~-------------------~ 247 (362)
T 3sxp_A 190 YGPREFYKEKT---ASMVLQLALGAMAFKEVKLFEFGEQLRDFVYIEDVIQANVKAMKAQ-------------------K 247 (362)
T ss_dssp ESTTCGGGGGG---SCHHHHHHHHHHTTSEEECSGGGCCEEECEEHHHHHHHHHHHTTCS-------------------S
T ss_pred eCcCCCCCCcc---hhHHHHHHHHHHhCCCeEEECCCCeEEccEEHHHHHHHHHHHHhcC-------------------C
Confidence 99865432111 0122345555666655556677889999999999999999988643 2
Q ss_pred CCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 514 DPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 514 ~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.| +|||+++ .+++|.+|++.|.+.++
T Consensus 248 ~g-~~~i~~~--~~~s~~e~~~~i~~~~g 273 (362)
T 3sxp_A 248 SG-VYNVGYS--QARSYNEIVSILKEHLG 273 (362)
T ss_dssp CE-EEEESCS--CEEEHHHHHHHHHHHHC
T ss_pred CC-EEEeCCC--CCccHHHHHHHHHHHcC
Confidence 35 9999999 89999999999999887
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.2e-24 Score=223.79 Aligned_cols=202 Identities=16% Similarity=0.044 Sum_probs=151.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.+|++++.+ ..++.+ |+||||||.... ...+..++.+|+.||.+|+++|.. .++++|||+||
T Consensus 43 ~~~~~~~~Dl~d~~~-------~~~~~~-d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS 113 (312)
T 3ko8_A 43 PSAELHVRDLKDYSW-------GAGIKG-DVVFHFAANPEVRLSTTEPIVHFNENVVATFNVLEWARQ-TGVRTVVFASS 113 (312)
T ss_dssp TTSEEECCCTTSTTT-------TTTCCC-SEEEECCSSCSSSGGGSCHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEE
T ss_pred CCceEEECccccHHH-------HhhcCC-CEEEECCCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEeCc
Confidence 578999999998752 334555 999999996542 234567889999999999999998 47899999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
++|||... .+.|+.. .. ..+.|+.||+++|++++.++ .|++++|+|
T Consensus 114 ~~vyg~~~~~~~~e~~~-----------------------------~~-p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lr 163 (312)
T 3ko8_A 114 STVYGDADVIPTPEEEP-----------------------------YK-PISVYGAAKAAGEVMCATYARLFGVRCLAVR 163 (312)
T ss_dssp GGGGCSCSSSSBCTTSC-----------------------------CC-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEE
T ss_pred HHHhCCCCCCCCCCCCC-----------------------------CC-CCChHHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 99998643 2333210 01 33679999999999999987 699999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhcc-ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGL-IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
|++|||+...+ ..+..++..+..+. ...+++++...++||||+|||++++.++.......
T Consensus 164 p~~v~g~~~~~--------~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~~----------- 224 (312)
T 3ko8_A 164 YANVVGPRLRH--------GVIYDFIMKLRRNPNVLEVLGDGTQRKSYLYVRDAVEATLAAWKKFEEMD----------- 224 (312)
T ss_dssp ECEEECTTCCS--------SHHHHHHHHHHHCTTEEEEC----CEECEEEHHHHHHHHHHHHHHHHHSC-----------
T ss_pred eccccCcCCCC--------ChHHHHHHHHHhCCCCeEEcCCCCeEEeeEEHHHHHHHHHHHHHhccccC-----------
Confidence 99999986421 11234555555542 33456778899999999999999999987622110
Q ss_pred CCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 509 PIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ .++++.||++.+.+.++
T Consensus 225 ----~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 252 (312)
T 3ko8_A 225 ----APFLALNVGNV--DAVRVLDIAQIVAEVLG 252 (312)
T ss_dssp ----CSEEEEEESCS--SCEEHHHHHHHHHHHHT
T ss_pred ----CCCcEEEEcCC--CceeHHHHHHHHHHHhC
Confidence 25789999999 89999999999999987
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=99.92 E-value=1.1e-24 Score=227.09 Aligned_cols=218 Identities=13% Similarity=0.078 Sum_probs=160.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.||++++. ..+..+++++|+||||||..... .+...++.+|+.||.+|+++|.. .+ ++|||+||
T Consensus 45 ~~~~~~~~D~~~~~-----~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~-~~~v~~SS 117 (345)
T 2bll_A 45 PHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVK-YR-KRIIFPST 117 (345)
T ss_dssp TTEEEEECCTTTCS-----HHHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHH-TT-CEEEEECC
T ss_pred CCeEEEeccccCcH-----HHHHhhccCCCEEEEcccccCccchhcCHHHHHHHHHHHHHHHHHHHHH-hC-CeEEEEec
Confidence 57999999999743 23677788999999999987632 34566889999999999999998 45 89999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
++|||... .+.|+..+.+.. | ... ..+.|+.||+++|++++.++ .|++++|+|
T Consensus 118 ~~v~g~~~~~~~~e~~~~~~~~--------------------~--~~~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilr 174 (345)
T 2bll_A 118 SEVYGMCSDKYFDEDHSNLIVG--------------------P--VNK-PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFR 174 (345)
T ss_dssp GGGGBTCCCSSBCTTTCCCBCC--------------------C--TTC-GGGHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHcCCCCCCCcCCcccccccC--------------------c--ccC-cccccHHHHHHHHHHHHHHHHhcCCCEEEEc
Confidence 99998643 233322110000 0 001 23579999999999999886 799999999
Q ss_pred CCccccCCCCCccccCCCCC-CcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLY-GPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~-~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
|++|||+...+...+..... ....++..+..|....+++++...++||||+|||++++.++......
T Consensus 175 p~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~------------ 242 (345)
T 2bll_A 175 PFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR------------ 242 (345)
T ss_dssp ECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGT------------
T ss_pred CCcccCCCcccccccccccccHHHHHHHHHHcCCCcEEECCCCEEEEEEEHHHHHHHHHHHHhhcccc------------
Confidence 99999987543211110101 12345555566655556677888999999999999999998754310
Q ss_pred CCCCCCCCeEEccCCCCC-cccHHHHHHHHHHHcc
Q psy5825 509 PIPRTDPPVYNLSISSSY-PITWLEYMNSVQAAGK 542 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~-~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ . ++|+.+|++.|.+.++
T Consensus 243 ----~~g~~~~i~~~--~~~~s~~e~~~~i~~~~g 271 (345)
T 2bll_A 243 ----CDGEIINIGNP--ENEASIEELGEMLLASFE 271 (345)
T ss_dssp ----TTTEEEEECCT--TSEEEHHHHHHHHHHHHH
T ss_pred ----CCCceEEeCCC--CCCCCHHHHHHHHHHHhC
Confidence 14679999997 6 7999999999999887
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=3.2e-24 Score=227.45 Aligned_cols=250 Identities=8% Similarity=-0.004 Sum_probs=174.2
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hHHHhhhhh--hhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccC
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LFDRLKNEQ--ADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASL 315 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~~~l~~~~--~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v 315 (596)
.+||.+.+|.-+..-+..++... ++-..+... ......++.++.|||+++ +.+..++.++|+||||||..
T Consensus 31 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~v~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~ 104 (379)
T 2c5a_A 31 KISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDMFCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAADM 104 (379)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGGTCSEEEECCTTSH------HHHHHHHTTCSEEEECCCCC
T ss_pred eEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhccCCceEEECCCCCH------HHHHHHhCCCCEEEECceec
Confidence 35677777766666656555431 110000000 000114688999999864 45888889999999999987
Q ss_pred Ch----hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHh
Q psy5825 316 RF----DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEI 391 (596)
Q Consensus 316 ~~----~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~ 391 (596)
.. ..++..++.+|+.||.+|+++|.. .++++|||+||+++|+........ .. .+++...
T Consensus 105 ~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-~~~~~~V~~SS~~v~~~~~~~~~~--~~------------~~~E~~~-- 167 (379)
T 2c5a_A 105 GGMGFIQSNHSVIMYNNTMISFNMIEAARI-NGIKRFFYASSACIYPEFKQLETT--NV------------SLKESDA-- 167 (379)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEEEGGGSCGGGSSSSS--SC------------EECGGGG--
T ss_pred CcccccccCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEeehheeCCCCCCCcc--CC------------CcCcccC--
Confidence 53 345677899999999999999998 578999999999999853210000 00 0011100
Q ss_pred hhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc-eEeec
Q psy5825 392 LSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI-HTFYA 468 (596)
Q Consensus 392 ~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~-~~~~~ 468 (596)
.+ .. ..+.|+.||+.+|++++.++ .|++++|+||++|||+...+..++ ...+..++..+..|.. ..+++
T Consensus 168 -~~---~~-~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~G~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~g 239 (379)
T 2c5a_A 168 -WP---AE-PQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGR---EKAPAAFCRKAQTSTDRFEMWG 239 (379)
T ss_dssp -SS---BC-CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSC---CCHHHHHHHHHHHCSSCEEEES
T ss_pred -CC---CC-CCChhHHHHHHHHHHHHHHHHHHCCCEEEEEeCceeCcCCCccccc---ccHHHHHHHHHHhCCCceEEeC
Confidence 00 01 33689999999999999886 799999999999999865432111 1122345555555543 34567
Q ss_pred CCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 469 KHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 469 ~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
++...++||||+|||++++.++... .+++||++++ .++++.||++.|.+.++
T Consensus 240 ~g~~~~~~i~v~Dva~ai~~~l~~~--------------------~~~~~ni~~~--~~~s~~e~~~~i~~~~g 291 (379)
T 2c5a_A 240 DGLQTRSFTFIDECVEGVLRLTKSD--------------------FREPVNIGSD--EMVSMNEMAEMVLSFEE 291 (379)
T ss_dssp CSCCEECCEEHHHHHHHHHHHHHSS--------------------CCSCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred CCCeeEEEEEHHHHHHHHHHHhhcc--------------------CCCeEEeCCC--CccCHHHHHHHHHHHhC
Confidence 7888999999999999999988642 3569999998 89999999999999887
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=1.3e-23 Score=219.48 Aligned_cols=212 Identities=16% Similarity=0.144 Sum_probs=156.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.+||+++ +.+..++. ++|+||||||..... .....++.+|+.||.+|+++|.. .++++|||+
T Consensus 58 ~~~~~~~~D~~~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~ 130 (348)
T 1ek6_A 58 RSVEFEEMDILDQ------GALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA-HGVKNLVFS 130 (348)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CceEEEECCCCCH------HHHHHHHHhcCCCEEEECCCCcCccchhhchHHHHHHHHHHHHHHHHHHHH-hCCCEEEEE
Confidence 5789999999964 35778887 799999999987643 34566889999999999999998 578999999
Q ss_pred cCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cC--CCEE
Q psy5825 352 STLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YK--LPLA 426 (596)
Q Consensus 352 SS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~g--l~~~ 426 (596)
||+++||... .++|+..+ .. ..+.|+.||+++|++++.++ .+ ++++
T Consensus 131 SS~~~~g~~~~~~~~E~~~~----------------------------~p-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ 181 (348)
T 1ek6_A 131 SSATVYGNPQYLPLDEAHPT----------------------------GG-CTNPYGKSKFFIEEMIRDLCQADKTWNAV 181 (348)
T ss_dssp EEGGGGCSCSSSSBCTTSCC----------------------------CC-CSSHHHHHHHHHHHHHHHHHHHCTTCEEE
T ss_pred CcHHHhCCCCCCCcCCCCCC----------------------------CC-CCCchHHHHHHHHHHHHHHHhcCCCcceE
Confidence 9999998632 23332110 00 13689999999999999887 44 9999
Q ss_pred EecCCccccCCCCCccccCCC--CCCcHHHHHHHHh--ccceEeec------CCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNN--LYGPGGAAAGAAL--GLIHTFYA------KHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~--~~~~~~l~~~~~~--g~~~~~~~------~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
|+||++|||+...+..|.... .......+..... +....+++ ++...++||||+|||++++.++......
T Consensus 182 ~lR~~~v~G~~~~g~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~~~~ 261 (348)
T 1ek6_A 182 LLRYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQ 261 (348)
T ss_dssp EEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTT
T ss_pred EEeeccccCCCcccccCcCcccchhhHHHHHHHHHHhcCCCeEEeCCcccCCCCceEEeeEEHHHHHHHHHHHHhccccc
Confidence 999999999864332222111 1223334444443 32233444 5678899999999999999998764210
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.++++||++++ .++++.||++.+.+.++
T Consensus 262 ----------------~g~~~~ni~~~--~~~s~~e~~~~i~~~~g 289 (348)
T 1ek6_A 262 ----------------CGCRIYNLGTG--TGYSVLQMVQAMEKASG 289 (348)
T ss_dssp ----------------CCEEEEEECCS--CCEEHHHHHHHHHHHHC
T ss_pred ----------------CCceEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 12379999998 88999999999999887
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.7e-24 Score=228.87 Aligned_cols=221 Identities=12% Similarity=0.043 Sum_probs=155.3
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHhc--c-ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEec
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQH--H-IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVS 352 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~~--~-vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vS 352 (596)
+.++.|||+++. .+..++. + +|+||||||..... ..+..++.+|+.||.+|+++|.. .++++|||+|
T Consensus 71 ~~~~~~Dl~d~~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~ll~a~~~-~~~~~iv~~S 143 (397)
T 1gy8_A 71 AALEVGDVRNED------FLNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLL-HKCDKIIFSS 143 (397)
T ss_dssp CEEEESCTTCHH------HHHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEE
T ss_pred EEEEECCCCCHH------HHHHHHHhcCCCCEEEECCCccCcCcchhhHHHHHHHHhHHHHHHHHHHHH-hCCCEEEEEC
Confidence 899999999654 4777776 6 99999999987653 34567899999999999999998 5789999999
Q ss_pred CcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecC
Q psy5825 353 TLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRP 430 (596)
Q Consensus 353 S~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp 430 (596)
|++|||..... ...+.. ..++|. .+. . ..+.|+.||+++|++++.++ .|++++|+||
T Consensus 144 S~~v~g~~~~~--~~~~~~----------~~~~E~-----~~~---~-p~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilRp 202 (397)
T 1gy8_A 144 SAAIFGNPTMG--SVSTNA----------EPIDIN-----AKK---S-PESPYGESKLIAERMIRDCAEAYGIKGICLRY 202 (397)
T ss_dssp EGGGTBSCCC-------CC----------CCBCTT-----SCC---B-CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred CHHHhCCCCcc--cccccc----------cCcCcc-----CCC---C-CCCchHHHHHHHHHHHHHHHHHHCCcEEEEec
Confidence 99999853200 000000 000110 010 0 23689999999999999887 6999999999
Q ss_pred CccccCCCCCccccCCC-CCCcHHHHH-----HHHhccc------------eEeec------CCCCccccccHHHHHHHH
Q psy5825 431 SIVVSTWKEPIVGWSNN-LYGPGGAAA-----GAALGLI------------HTFYA------KHDKKCDLIPVDVATNMM 486 (596)
Q Consensus 431 ~~V~G~~~~p~~G~~~~-~~~~~~l~~-----~~~~g~~------------~~~~~------~~~~~~d~ipVDdva~ai 486 (596)
++|||+...+..|+... ......++. .+..|.. ..+++ ++...++||||+|||+++
T Consensus 203 ~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~v~v~Dva~a~ 282 (397)
T 1gy8_A 203 FNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLASAH 282 (397)
T ss_dssp CEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHHHH
T ss_pred cceeCCCccccccccccchhHHHHHHHHHHHHHHHhcCccccccccccCCCceeecCcccCCCCCeeEeeEeHHHHHHHH
Confidence 99999976543333211 122233333 3334431 23444 567889999999999999
Q ss_pred HHHHHhhhccCCCCCCCCCcCCCCCCCCC---CeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 487 LGVVWKTALDHGHVAPPASLVAPIPRTDP---PVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 487 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+.++....... ....+ ++|||+++ .+++|.+|++.|.+.++
T Consensus 283 ~~~l~~~~~~~-------------~~~~~~~~~~~ni~~~--~~~s~~e~~~~i~~~~g 326 (397)
T 1gy8_A 283 ILALDYVEKLG-------------PNDKSKYFSVFNLGTS--RGYSVREVIEVARKTTG 326 (397)
T ss_dssp HHHHHHHHTCC-------------TTTGGGSEEEEEESCS--CCEEHHHHHHHHHHHHC
T ss_pred HHHHhcccccc-------------cccccCCCcEEEeCCC--CcccHHHHHHHHHHHhC
Confidence 99987543200 00013 79999998 89999999999999887
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.92 E-value=5.9e-24 Score=221.71 Aligned_cols=222 Identities=14% Similarity=0.126 Sum_probs=157.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCc-eEEE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLK-AILH 350 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vk-rfV~ 350 (596)
.++.++.|||+++ +.+..++++ +|+||||||..... ..+..++.+|+.||.+|+++|... +++ +|||
T Consensus 50 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~iv~ 122 (347)
T 1orr_A 50 GNFEFVHGDIRNK------NDVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIY 122 (347)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred CceEEEEcCCCCH------HHHHHHHhccCCCEEEECCcccChhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 4689999999964 458888888 99999999987643 345678899999999999999984 564 9999
Q ss_pred ecCcccccCCcc--ccccc--cCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 351 VSTLYTHSYRED--IQEEF--YPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 351 vSS~~v~g~~~~--i~E~~--~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
+||.+|||.... +.|+. +..+..+ ..+++. .+ .. ..+.|+.||+++|++++.++ .|++
T Consensus 123 ~SS~~v~g~~~~~~~~e~~~~~~~~~~~-------~~~~e~-----~~---~~-~~~~Y~~sK~~~E~~~~~~~~~~gi~ 186 (347)
T 1orr_A 123 SSTNKVYGDLEQYKYNETETRYTCVDKP-------NGYDES-----TQ---LD-FHSPYGCSKGAADQYMLDYARIFGLN 186 (347)
T ss_dssp EEEGGGGTTCTTSCEEECSSCEEETTCT-------TCBCTT-----SC---CC-CCHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred eccHHHhCCCCcCCcccccccccccccc-------cCcccc-----CC---CC-CCCchHHHHHHHHHHHHHHHHHhCCc
Confidence 999999986431 11110 0000000 000000 00 01 33679999999999999987 6999
Q ss_pred EEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhcc-----ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCC
Q psy5825 425 LAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGL-----IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGH 499 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~-----~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~ 499 (596)
++|+||++|||+...+.. + ......++..+..|. ...+++++...++||+|+|||++++.++.....
T Consensus 187 ~~ilrp~~v~g~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~~~---- 258 (347)
T 1orr_A 187 TVVFRHSSMYGGRQFATY---D-QGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSK---- 258 (347)
T ss_dssp EEEEEECCEECTTCCCBT---T-BCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHH----
T ss_pred EEEEccCceeCcCCCCCC---c-CcHHHHHHHHHHhCcccCCCCeEEecCCcceEeeEEHHHHHHHHHHHHhcccc----
Confidence 999999999998653210 0 011223444454554 334567888999999999999999998864221
Q ss_pred CCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 500 VAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 500 ~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..|++||++++...++++.+|++.|.+.++
T Consensus 259 -------------~~g~~~~v~~~~~~~~s~~e~~~~i~~~~g 288 (347)
T 1orr_A 259 -------------IRGNAFNIGGTIVNSLSLLELFKLLEDYCN 288 (347)
T ss_dssp -------------HTTCEEEESSCGGGEEEHHHHHHHHHHHHT
T ss_pred -------------CCCCEEEeCCCCCCCccHHHHHHHHHHHhC
Confidence 247899999982125999999999999887
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=99.92 E-value=2.3e-24 Score=225.14 Aligned_cols=213 Identities=15% Similarity=0.086 Sum_probs=157.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.||++++ +.+..+++++|+||||||..... .++..++.+|+.||.+|+++|... ++ +|||+||
T Consensus 54 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~-~~v~~SS 125 (348)
T 1oc2_A 54 DRVELVVGDIADA------ELVDKLAAKADAIVHYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-DI-RFHHVST 125 (348)
T ss_dssp SSEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEE
T ss_pred CCeEEEECCCCCH------HHHHHHhhcCCEEEECCcccCccchhhCHHHHHHHHHHHHHHHHHHHHHh-CC-eEEEecc
Confidence 5799999999965 45888999999999999987643 234568899999999999999984 56 9999999
Q ss_pred cccccCCcccc-ccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecC
Q psy5825 354 LYTHSYREDIQ-EEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRP 430 (596)
Q Consensus 354 ~~v~g~~~~i~-E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp 430 (596)
++|||...... ......+ +. ..+++. .+ .. ..+.|+.||+.+|++++.++ .|++++|+||
T Consensus 126 ~~vyg~~~~~~~~~~~~~~-~~-------~~~~E~-----~~---~~-~~~~Y~~sK~~~e~~~~~~~~~~gi~~~ilrp 188 (348)
T 1oc2_A 126 DEVYGDLPLREDLPGHGEG-PG-------EKFTAE-----TN---YN-PSSPYSSTKAASDLIVKAWVRSFGVKATISNC 188 (348)
T ss_dssp GGGGCCBCCGGGSTTTTCS-TT-------SSBCTT-----SC---CC-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred cceeCCCcccccccccccc-cC-------CCcCCC-----CC---CC-CCCccHHHHHHHHHHHHHHHHHhCCCEEEEee
Confidence 99998632100 0000000 00 000110 01 01 33689999999999999887 6999999999
Q ss_pred CccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCC
Q psy5825 431 SIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPI 510 (596)
Q Consensus 431 ~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~ 510 (596)
++|||+...+. .....++..+..|....+++++...++|+||+|||++++.++...
T Consensus 189 ~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~----------------- 244 (348)
T 1oc2_A 189 SNNYGPYQHIE-------KFIPRQITNILAGIKPKLYGEGKNVRDWIHTNDHSTGVWAILTKG----------------- 244 (348)
T ss_dssp CCEESTTCCTT-------SHHHHHHHHHHHTCCCEEETTSCCEEECEEHHHHHHHHHHHHHHC-----------------
T ss_pred ceeeCCCCCcc-------chHHHHHHHHHcCCCceEecCCCceEeeEEHHHHHHHHHHHhhCC-----------------
Confidence 99999864210 112344555556655556677888999999999999999988642
Q ss_pred CCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 511 PRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 511 ~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ .++++.+|++.|.+.++
T Consensus 245 --~~g~~~~i~~~--~~~s~~e~~~~i~~~~g 272 (348)
T 1oc2_A 245 --RMGETYLIGAD--GEKNNKEVLELILEKMG 272 (348)
T ss_dssp --CTTCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred --CCCCeEEeCCC--CCCCHHHHHHHHHHHhC
Confidence 24789999998 89999999999999887
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=8.7e-24 Score=219.95 Aligned_cols=201 Identities=18% Similarity=0.126 Sum_probs=158.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.||++++ +.+..++.++|+||||||..... .++..++.+|+.||.+|+++|.. .++++|||+||
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~Nv~~~~~l~~a~~~-~~~~~~v~~SS 127 (337)
T 1r6d_A 55 PRLRFVHGDIRDA------GLLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVD-AGVGRVVHVST 127 (337)
T ss_dssp TTEEEEECCTTCH------HHHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred CCeEEEEcCCCCH------HHHHHHhcCCCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEecc
Confidence 5799999999965 45888889999999999987643 23456889999999999999998 57899999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
.+|||... .+.|+. + .. ..+.|+.||+++|++++.++ .|++++|+|
T Consensus 128 ~~vyg~~~~~~~~E~~--------------------------~---~~-~~~~Y~~sK~~~e~~~~~~~~~~g~~~~ilr 177 (337)
T 1r6d_A 128 NQVYGSIDSGSWTESS--------------------------P---LE-PNSPYAASKAGSDLVARAYHRTYGLDVRITR 177 (337)
T ss_dssp GGGGCCCSSSCBCTTS--------------------------C---CC-CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred hHHhCCCCCCCCCCCC--------------------------C---CC-CCCchHHHHHHHHHHHHHHHHHHCCCEEEEE
Confidence 99998642 222211 0 00 23679999999999999877 699999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
|++|||+...+. .....++..+..|....+++++...++|+||+|+|++++.++...
T Consensus 178 p~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~---------------- 234 (337)
T 1r6d_A 178 CCNNYGPYQHPE-------KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGG---------------- 234 (337)
T ss_dssp ECEEECTTCCTT-------SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC----------------
T ss_pred eeeeECCCCCCC-------ChHHHHHHHHhcCCCcEEeCCCCeeEeeEeHHHHHHHHHHHHhCC----------------
Confidence 999999864210 112344555555654456678888999999999999999988642
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ .++++.+|++.|.+.++
T Consensus 235 ---~~g~~~~v~~~--~~~s~~e~~~~i~~~~g 262 (337)
T 1r6d_A 235 ---RAGEIYHIGGG--LELTNRELTGILLDSLG 262 (337)
T ss_dssp ---CTTCEEEECCC--CEEEHHHHHHHHHHHHT
T ss_pred ---CCCCEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 24789999998 88999999999999887
|
| >2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.4e-23 Score=219.29 Aligned_cols=201 Identities=17% Similarity=0.128 Sum_probs=153.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.+|+.++.+ .++|+||||||..... ..+..++.+|+.||.+|+++|... ++ +|||+||
T Consensus 75 ~~~~~~~~D~~~~~~-----------~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS 141 (343)
T 2b69_A 75 ENFELINHDVVEPLY-----------IEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLAST 141 (343)
T ss_dssp TTEEEEECCTTSCCC-----------CCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEE
T ss_pred CceEEEeCccCChhh-----------cCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-CC-cEEEECc
Confidence 478999999987643 5799999999987642 345678899999999999999984 55 9999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
++|||... .++|+.+.. ..| .. ..+.|+.||+++|++++.++ .|++++|+|
T Consensus 142 ~~v~g~~~~~~~~E~~~~~---------------------~~~---~~-~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilr 196 (343)
T 2b69_A 142 SEVYGDPEVHPQSEDYWGH---------------------VNP---IG-PRACYDEGKRVAETMCYAYMKQEGVEVRVAR 196 (343)
T ss_dssp GGGGBSCSSSSBCTTCCCB---------------------CCS---SS-TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred HHHhCCCCCCCCccccccc---------------------CCC---CC-CCCchHHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 99998643 333322110 000 00 23579999999999999876 799999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
|++|||+...+..+ .....++..+..|....+++++...++||||+|||++++.++...
T Consensus 197 p~~v~G~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~---------------- 255 (343)
T 2b69_A 197 IFNTFGPRMHMNDG-----RVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN---------------- 255 (343)
T ss_dssp ECCEECTTCCTTCC-----CHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS----------------
T ss_pred EcceeCcCCCCCcc-----cHHHHHHHHHHcCCCceEcCCCCeEEeeEeHHHHHHHHHHHHhcC----------------
Confidence 99999986532111 112345555556655556788889999999999999999887532
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++++.||++.|.+.++
T Consensus 256 ----~~~~~~i~~~--~~~s~~e~~~~i~~~~g 282 (343)
T 2b69_A 256 ----VSSPVNLGNP--EEHTILEFAQLIKNLVG 282 (343)
T ss_dssp ----CCSCEEESCC--CEEEHHHHHHHHHHHHT
T ss_pred ----CCCeEEecCC--CCCcHHHHHHHHHHHhC
Confidence 3569999999 89999999999999887
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=4.6e-24 Score=226.02 Aligned_cols=249 Identities=15% Similarity=0.061 Sum_probs=170.3
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh---hHHHhhhhhh--hhh--cCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcC
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE---LFDRLKNEQA--DIL--QRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAA 312 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~---~~~~l~~~~~--~~~--~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~A 312 (596)
.+||.+.+|.-+..-+..++... ++-..+.... ..+ ..++.++.||++++ +.+..+++++|+|||||
T Consensus 34 ~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~------~~l~~~~~~~d~Vih~A 107 (377)
T 2q1s_A 34 NVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDD------ALLASLQDEYDYVFHLA 107 (377)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCH------HHHHHCCSCCSEEEECC
T ss_pred EEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCH------HHHHHHhhCCCEEEECC
Confidence 46777777777766666665432 1110010000 011 25789999999864 45888888999999999
Q ss_pred ccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--ccc--ccccCCCCChHHHHHHHhcCC
Q psy5825 313 ASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQ--EEFYPPLFSYEDLAHVMQTTN 385 (596)
Q Consensus 313 A~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~--E~~~~~~~~~~~~~~~~~~~~ 385 (596)
|..... .++..++.+|+.||.+|+++|....++++|||+||++|||... .+. |+.+..
T Consensus 108 ~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~~vyg~~~~~~~~~~E~~~~~--------------- 172 (377)
T 2q1s_A 108 TYHGNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAGCSIAEKTFDDAKATEETDIV--------------- 172 (377)
T ss_dssp CCSCHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC--------------CCCCCC---------------
T ss_pred CccCchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCHHHcCCCCCCCcCcccccccc---------------
Confidence 987653 3456789999999999999999832789999999999998632 122 211000
Q ss_pred hHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccc-cCCCC-----CCcHHHHHH
Q psy5825 386 QEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVG-WSNNL-----YGPGGAAAG 457 (596)
Q Consensus 386 e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G-~~~~~-----~~~~~l~~~ 457 (596)
|. .. ..+.|+.+|+++|++++.++ .|++++|+||++|||+...+.+| |.... .....++..
T Consensus 173 --------~~--~~-~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~ 241 (377)
T 2q1s_A 173 --------SL--HN-NDSPYSMSKIFGEFYSVYYHKQHQLPTVRARFQNVYGPGEILGAGRWRGTPATVWRNVTPTFIYK 241 (377)
T ss_dssp --------CS--SC-CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECCEECTTCCTTCSSCCSSGGGTSCSHHHHHHHH
T ss_pred --------cc--cC-CCCchHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCcccccccccCcccccccHHHHHHHH
Confidence 00 01 33679999999999999886 69999999999999986522222 21111 112345555
Q ss_pred HHhccceEeecCCCCccccccHHHHHHH-HHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHH
Q psy5825 458 AALGLIHTFYAKHDKKCDLIPVDVATNM-MLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNS 536 (596)
Q Consensus 458 ~~~g~~~~~~~~~~~~~d~ipVDdva~a-ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~ 536 (596)
+..|....++++++..++||||+|||++ ++.++... ..| +|||+++ .++++.||++.
T Consensus 242 ~~~g~~~~~~g~g~~~~~~i~v~Dva~a~i~~~~~~~-------------------~~g-~~~i~~~--~~~s~~e~~~~ 299 (377)
T 2q1s_A 242 ALKGMPLPLENGGVATRDFIFVEDVANGLIACAADGT-------------------PGG-VYNIASG--KETSIADLATK 299 (377)
T ss_dssp HHTTCCCCCSGGGCCEECCEEHHHHHHHHHHHHHHCC-------------------TTE-EEECCCC--CCEEHHHHHHH
T ss_pred HHcCCCeEEeCCCCeEEeeEEHHHHHHHHHHHHHhcC-------------------CCC-eEEecCC--CceeHHHHHHH
Confidence 5566544456778899999999999999 88887652 135 9999998 89999999999
Q ss_pred HHHHcc
Q psy5825 537 VQAAGK 542 (596)
Q Consensus 537 l~~~~~ 542 (596)
|.+.++
T Consensus 300 i~~~~g 305 (377)
T 2q1s_A 300 INEITG 305 (377)
T ss_dssp HHHHHT
T ss_pred HHHHhC
Confidence 999887
|
| >1e6u_A GDP-fucose synthetase; epimerase/reductase, SDR, RED; HET: NAP; 1.45A {Escherichia coli} SCOP: c.2.1.2 PDB: 1e7q_A* 1bsv_A* 1fxs_A* 1gfs_A 1e7s_A* 1bws_A* 1e7r_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=1.5e-23 Score=216.48 Aligned_cols=242 Identities=11% Similarity=0.039 Sum_probs=166.1
Q ss_pred EEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEE----EeccCCCCCCCCHHHHHHHhc--cccEEEEcCc
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHII----SGDISQPSLGISSHDQQFIQH--HIHVIIHAAA 313 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v----~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA 313 (596)
.+||.+.+|.-+..-+..++... ..|.++ .+|+++ .+.+..++. ++|+||||||
T Consensus 5 ~ilVtGatG~iG~~l~~~L~~~g--------------~~v~~~~r~~~~D~~d------~~~~~~~~~~~~~d~vih~a~ 64 (321)
T 1e6u_A 5 RVFIAGHRGMVGSAIRRQLEQRG--------------DVELVLRTRDELNLLD------SRAVHDFFASERIDQVYLAAA 64 (321)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCT--------------TEEEECCCTTTCCTTC------HHHHHHHHHHHCCSEEEECCC
T ss_pred EEEEECCCcHHHHHHHHHHHhCC--------------CeEEEEecCccCCccC------HHHHHHHHHhcCCCEEEEcCe
Confidence 46788877777766655554321 112222 245553 455788888 8999999999
Q ss_pred cCCh----hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChH
Q psy5825 314 SLRF----DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQE 387 (596)
Q Consensus 314 ~v~~----~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~ 387 (596)
.... ..+...++.+|+.||.+|+++|.. .++++|||+||.+|||... .+.|+....
T Consensus 65 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS~~vyg~~~~~~~~E~~~~~----------------- 126 (321)
T 1e6u_A 65 KVGGIVANNTYPADFIYQNMMIESNIIHAAHQ-NDVNKLLFLGSSCIYPKLAKQPMAESELLQ----------------- 126 (321)
T ss_dssp CCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEECCGGGSCTTCCSSBCGGGTTS-----------------
T ss_pred ecCCcchhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCeEEEEccHHHcCCCCCCCcCcccccc-----------------
Confidence 8752 345567899999999999999998 5789999999999998632 233321100
Q ss_pred HHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHh----c
Q psy5825 388 ELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAAL----G 461 (596)
Q Consensus 388 ~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~----g 461 (596)
.+. .. ..+.|+.+|+.+|++++.++ .|++++|+||++|||+...+... .......++..+.. |
T Consensus 127 -----~~~--~p-~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilrp~~v~G~~~~~~~~---~~~~~~~~~~~~~~~~~~g 195 (321)
T 1e6u_A 127 -----GTL--EP-TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPS---NSHVIPALLRRFHEATAQK 195 (321)
T ss_dssp -----SCC--CG-GGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTT---CSSHHHHHHHHHHHHHHHT
T ss_pred -----CCC--CC-CCCccHHHHHHHHHHHHHHHHHhCCCEEEEEeCCcCCcCCCCCCC---CCccHHHHHHHHHHhhhcC
Confidence 000 00 11479999999999999887 69999999999999986532110 00112334444433 2
Q ss_pred -cceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHH
Q psy5825 462 -LIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAA 540 (596)
Q Consensus 462 -~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~ 540 (596)
....++++++..++||||+|+|++++.++....... ... +...+++||++++ .+++|.+|++.|.+.
T Consensus 196 ~~~~~~~~~g~~~~~~i~v~Dva~~~~~~~~~~~~~~--------~~~--~~~~~~~~ni~~~--~~~s~~e~~~~i~~~ 263 (321)
T 1e6u_A 196 APDVVVWGSGTPMREFLHVDDMAAASIHVMELAHEVW--------LEN--TQPMLSHINVGTG--VDCTIRELAQTIAKV 263 (321)
T ss_dssp CSEEEEESCSCCEECEEEHHHHHHHHHHHHHSCHHHH--------HHT--SBTTBCCEEESCS--CCEEHHHHHHHHHHH
T ss_pred CCceEEcCCCCEEEEeEEHHHHHHHHHHHHhCccccc--------ccc--cccCCceEEeCCC--CCccHHHHHHHHHHH
Confidence 233456778899999999999999999987543200 000 0012579999998 889999999999998
Q ss_pred cc
Q psy5825 541 GK 542 (596)
Q Consensus 541 ~~ 542 (596)
++
T Consensus 264 ~g 265 (321)
T 1e6u_A 264 VG 265 (321)
T ss_dssp HT
T ss_pred hC
Confidence 87
|
| >2hun_A 336AA long hypothetical DTDP-glucose 4,6-dehydrat; rossmann fold, structural genomics, NPPSFA; HET: NAD; 2.07A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=99.91 E-value=1.8e-23 Score=217.27 Aligned_cols=202 Identities=20% Similarity=0.153 Sum_probs=155.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.||++++ +.+..++.++|+||||||..... ..+..++.+|+.||.+|+++|.......+|||+||
T Consensus 54 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS 127 (336)
T 2hun_A 54 PRYTFVKGDVADY------ELVKELVRKVDGVVHLAAESHVDRSISSPEIFLHSNVIGTYTLLESIRRENPEVRFVHVST 127 (336)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHTCSEEEECCCCCCHHHHHHCTHHHHHHHHHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred CceEEEEcCCCCH------HHHHHHhhCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCcEEEEecc
Confidence 4789999999965 45888889999999999987643 23456889999999999999998533479999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
++|||... .++|+.. .. ..+.|+.||+++|++++.++ .|++++|+|
T Consensus 128 ~~vyg~~~~~~~~E~~~-----------------------------~~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilr 177 (336)
T 2hun_A 128 DEVYGDILKGSFTENDR-----------------------------LM-PSSPYSATKAASDMLVLGWTRTYNLNASITR 177 (336)
T ss_dssp GGGGCCCSSSCBCTTBC-----------------------------CC-CCSHHHHHHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHCCCCCCCcCCCCC-----------------------------CC-CCCccHHHHHHHHHHHHHHHHHhCCCEEEEe
Confidence 99998642 2332210 00 23679999999999999887 799999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
|++|||+...+. .....++..+..|....+++++...++|+||+|+|++++.++...
T Consensus 178 p~~v~g~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~---------------- 234 (336)
T 2hun_A 178 CTNNYGPYQFPE-------KLIPKTIIRASLGLKIPIYGTGKNVRDWLYVEDHVRAIELVLLKG---------------- 234 (336)
T ss_dssp ECEEESTTCCTT-------SHHHHHHHHHHTTCCEEEETC---CEEEEEHHHHHHHHHHHHHHC----------------
T ss_pred eeeeeCcCCCcC-------chHHHHHHHHHcCCCceEeCCCCceeeeEEHHHHHHHHHHHHhCC----------------
Confidence 999999864210 112334445555554456677888899999999999999988642
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ .++++.+|++.+.+.++
T Consensus 235 ---~~g~~~~v~~~--~~~s~~e~~~~i~~~~g 262 (336)
T 2hun_A 235 ---ESREIYNISAG--EEKTNLEVVKIILRLMG 262 (336)
T ss_dssp ---CTTCEEEECCS--CEECHHHHHHHHHHHTT
T ss_pred ---CCCCEEEeCCC--CcccHHHHHHHHHHHhC
Confidence 24789999998 88999999999999887
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=99.91 E-value=6.2e-23 Score=213.61 Aligned_cols=212 Identities=18% Similarity=0.151 Sum_probs=152.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.|||+++ +.+..++. ++|+||||||..... .....++.+|+.||.+|+++|.. .++++|||+
T Consensus 50 ~~~~~~~~Dl~~~------~~~~~~~~~~~~D~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv~~ 122 (338)
T 1udb_A 50 KHPTFVEGDIRNE------ALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRA-ANVKNFIFS 122 (338)
T ss_dssp SCCEEEECCTTCH------HHHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEE
T ss_pred CcceEEEccCCCH------HHHHHHhhccCCCEEEECCccCccccchhcHHHHHHHHHHHHHHHHHHHHh-cCCCeEEEE
Confidence 4688999999864 34777776 499999999986543 23456889999999999999987 478899999
Q ss_pred cCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--c-CCCEE
Q psy5825 352 STLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--Y-KLPLA 426 (596)
Q Consensus 352 SS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~-gl~~~ 426 (596)
||+++||... .+.|+. +. .. ..+.|+.||+++|++++.++ . +++++
T Consensus 123 SS~~~~g~~~~~~~~e~~--------------------------~~--~~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ 173 (338)
T 1udb_A 123 SSATVYGDNPKIPYVESF--------------------------PT--GT-PQSPYGKSKLMVEQILTDLQKAQPDWSIA 173 (338)
T ss_dssp EEGGGGCSCCSSSBCTTS--------------------------CC--CC-CSSHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred ccHHHhCCCCCCCcCccc--------------------------CC--CC-CCChHHHHHHHHHHHHHHHHHhcCCCceE
Confidence 9999998532 222211 00 00 23679999999999999876 3 89999
Q ss_pred EecCCccccCCCCCccccCCC--CCCcHHHHHHHHhcc--ceEeec------CCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNN--LYGPGGAAAGAALGL--IHTFYA------KHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~--~~~~~~l~~~~~~g~--~~~~~~------~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
|+||++|||+...+..|.... ......++.....|. ...+++ ++...++||||+|||++++.++......
T Consensus 174 ilR~~~v~G~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~~l~~~~~~ 253 (338)
T 1udb_A 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANK 253 (338)
T ss_dssp EEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTC
T ss_pred EEeeceecCCCcccccccccccchhhHHHHHHHHHHhcCCCcEEecCcccCCCCceeeeeEEHHHHHHHHHHHHhhhhcc
Confidence 999999999864333232111 112233444444332 122232 4567889999999999999988653210
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ .++++.+|++.+.+.++
T Consensus 254 ----------------~~~~~yni~~~--~~~s~~e~~~~i~~~~g 281 (338)
T 1udb_A 254 ----------------PGVHIYNLGAG--VGNSVLDVVNAFSKACG 281 (338)
T ss_dssp ----------------CEEEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred ----------------CCCcEEEecCC--CceeHHHHHHHHHHHhC
Confidence 12479999998 88999999999999887
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.9e-23 Score=217.52 Aligned_cols=237 Identities=11% Similarity=0.069 Sum_probs=161.7
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hH--HHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccC
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LF--DRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASL 315 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~--~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v 315 (596)
.+||.+.+|.-+..-+..++..+ ++ ++-..........+++++.||++++ +.+..++.++|+||||||..
T Consensus 15 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~~~~~~~~~~Dl~d~------~~~~~~~~~~d~vih~a~~~ 88 (342)
T 2x4g_A 15 KYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLAYLEPECRVAEMLDH------AGLERALRGLDGVIFSAGYY 88 (342)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGGGGCCEEEECCTTCH------HHHHHHTTTCSEEEEC----
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhccCCeEEEEecCCCH------HHHHHHHcCCCEEEECCccC
Confidence 46677766666666555555421 11 1100000011113789999999864 45888999999999999986
Q ss_pred Chh-hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCcc---ccccccCCCCChHHHHHHHhcCChHHHHh
Q psy5825 316 RFD-ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRED---IQEEFYPPLFSYEDLAHVMQTTNQEELEI 391 (596)
Q Consensus 316 ~~~-~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~---i~E~~~~~~~~~~~~~~~~~~~~e~~~~~ 391 (596)
... .+...++.+|+.||.+|+++|.. .++++|||+||+++|+.... ++|+..+
T Consensus 89 ~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~~v~~SS~~~~~~~~~~~~~~E~~~~---------------------- 145 (342)
T 2x4g_A 89 PSRPRRWQEEVASALGQTNPFYAACLQ-ARVPRILYVGSAYAMPRHPQGLPGHEGLFY---------------------- 145 (342)
T ss_dssp --------CHHHHHHHHHHHHHHHHHH-HTCSCEEEECCGGGSCCCTTSSCBCTTCCC----------------------
T ss_pred cCCCCCHHHHHHHHHHHHHHHHHHHHH-cCCCeEEEECCHHhhCcCCCCCCCCCCCCC----------------------
Confidence 532 34556889999999999999998 47899999999999986431 1221110
Q ss_pred hhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCC
Q psy5825 392 LSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKH 470 (596)
Q Consensus 392 ~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~ 470 (596)
.|. .. ..+.|+.||+++|++++.++ .|++++|+||++|||+... .. . ...++..+..|....+ +
T Consensus 146 -~p~--~~-~~~~Y~~sK~~~e~~~~~~~~~g~~~~ilrp~~v~g~~~~-----~~--~-~~~~~~~~~~~~~~~~---~ 210 (342)
T 2x4g_A 146 -DSL--PS-GKSSYVLCKWALDEQAREQARNGLPVVIGIPGMVLGELDI-----GP--T-TGRVITAIGNGEMTHY---V 210 (342)
T ss_dssp -SSC--CT-TSCHHHHHHHHHHHHHHHHHHTTCCEEEEEECEEECSCCS-----SC--S-TTHHHHHHHTTCCCEE---E
T ss_pred -Ccc--cc-ccChHHHHHHHHHHHHHHHhhcCCcEEEEeCCceECCCCc-----cc--c-HHHHHHHHHcCCCccc---c
Confidence 000 00 14689999999999999987 6999999999999997541 00 1 2345555556654333 4
Q ss_pred CCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 471 DKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 471 ~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+..++|+||+|+|++++.++.... .+++||++++ . +++.||++.+.+.++
T Consensus 211 ~~~~~~i~v~Dva~~~~~~~~~~~-------------------~g~~~~v~~~--~-~s~~e~~~~i~~~~g 260 (342)
T 2x4g_A 211 AGQRNVIDAAEAGRGLLMALERGR-------------------IGERYLLTGH--N-LEMADLTRRIAELLG 260 (342)
T ss_dssp CCEEEEEEHHHHHHHHHHHHHHSC-------------------TTCEEEECCE--E-EEHHHHHHHHHHHHT
T ss_pred CCCcceeeHHHHHHHHHHHHhCCC-------------------CCceEEEcCC--c-ccHHHHHHHHHHHhC
Confidence 678899999999999999986532 3779999998 7 999999999999887
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=99.90 E-value=3.7e-23 Score=213.60 Aligned_cols=238 Identities=15% Similarity=0.096 Sum_probs=170.3
Q ss_pred EEEEeCCCCcccHHHHHHHHhhhh--hHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCcc
Q psy5825 239 IYILLRSKKNKTVQERLAEQFKDE--LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAAS 314 (596)
Q Consensus 239 V~~LvR~~~~~~~~~Rl~~~~~~~--~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~ 314 (596)
-.+||.+.+|.-+..-+..++..+ ++-..+......+ ++.++.|||+++ +.+..++.+ +|+||||||.
T Consensus 13 ~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~l--~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~ 84 (321)
T 2pk3_A 13 MRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEAKLP--NVEMISLDIMDS------QRVKKVISDIKPDYIFHLAAK 84 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTCCCT--TEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSC
T ss_pred ceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCccccc--eeeEEECCCCCH------HHHHHHHHhcCCCEEEEcCcc
Confidence 346677777666665555555421 1100000000000 588999999864 457788776 8999999998
Q ss_pred CChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCC--c--cccccccCCCCChHHHHHHHhcCChH
Q psy5825 315 LRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYR--E--DIQEEFYPPLFSYEDLAHVMQTTNQE 387 (596)
Q Consensus 315 v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~--~--~i~E~~~~~~~~~~~~~~~~~~~~e~ 387 (596)
.... ..+..++.+|+.||.+|+++|..+.++.+|||+||++|||.. . .++|+...
T Consensus 85 ~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~~~iv~~SS~~v~g~~~~~~~~~~E~~~~------------------ 146 (321)
T 2pk3_A 85 SSVKDSWLNKKGTFSTNVFGTLHVLDAVRDSNLDCRILTIGSSEEYGMILPEESPVSEENQL------------------ 146 (321)
T ss_dssp CCHHHHTTCHHHHHHHHHHHHHHHHHHHHHHTCCCEEEEEEEGGGTBSCCGGGCSBCTTSCC------------------
T ss_pred cchhhhhhcHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEccHHhcCCCCCCCCCCCCCCCC------------------
Confidence 7643 246678999999999999999775468999999999999863 1 23332100
Q ss_pred HHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHh---c-
Q psy5825 388 ELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAAL---G- 461 (596)
Q Consensus 388 ~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~---g- 461 (596)
. ..+.|+.||+++|.+++.++ .|++++|+||++|||+...+ . .....++..+.. |
T Consensus 147 -----------~-~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilrp~~v~g~~~~~------~-~~~~~~~~~~~~~~~g~ 207 (321)
T 2pk3_A 147 -----------R-PMSPYGVSKASVGMLARQYVKAYGMDIIHTRTFNHIGPGQSL------G-FVTQDFAKQIVDIEMEK 207 (321)
T ss_dssp -----------B-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECTTCCT------T-SHHHHHHHHHHHHHTTS
T ss_pred -----------C-CCCccHHHHHHHHHHHHHHHHHcCCCEEEEEeCcccCcCCCC------C-chHHHHHHHHHHHhcCC
Confidence 0 23679999999999999887 69999999999999985421 0 112233434444 5
Q ss_pred -cceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHH
Q psy5825 462 -LIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAA 540 (596)
Q Consensus 462 -~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~ 540 (596)
....+++++...++|++|+|||++++.++... ..+++||++++ .++++.+|++.|.+.
T Consensus 208 ~~~~~~~~~~~~~~~~v~v~Dva~a~~~~~~~~-------------------~~g~~~~i~~~--~~~s~~e~~~~i~~~ 266 (321)
T 2pk3_A 208 QEPIIKVGNLEAVRDFTDVRDIVQAYWLLSQYG-------------------KTGDVYNVCSG--IGTRIQDVLDLLLAM 266 (321)
T ss_dssp SCSEEEESCSSCEEEEEEHHHHHHHHHHHHHHC-------------------CTTCEEEESCS--CEEEHHHHHHHHHHH
T ss_pred CCCeEEeCCCCcEEeeEEHHHHHHHHHHHHhCC-------------------CCCCeEEeCCC--CCeeHHHHHHHHHHH
Confidence 23345677788999999999999999998653 14689999998 899999999999998
Q ss_pred cc
Q psy5825 541 GK 542 (596)
Q Consensus 541 ~~ 542 (596)
++
T Consensus 267 ~g 268 (321)
T 2pk3_A 267 AN 268 (321)
T ss_dssp SS
T ss_pred hC
Confidence 87
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.90 E-value=4.3e-23 Score=214.36 Aligned_cols=203 Identities=13% Similarity=-0.000 Sum_probs=155.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCC-ceEEE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQL-KAILH 350 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~v-krfV~ 350 (596)
.++.++.||++++ +.+..++.+ +|+||||||..... .++..++.+|+.||.+|+++|... ++ ++|||
T Consensus 63 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~~~~~v~ 135 (335)
T 1rpn_A 63 GDIQYEDGDMADA------CSVQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQF-SPETRFYQ 135 (335)
T ss_dssp GGEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTSEEEE
T ss_pred CceEEEECCCCCH------HHHHHHHHHcCCCEEEECccccchhhhhhChHHHHHHHHHHHHHHHHHHHHh-CCCCeEEE
Confidence 4689999999864 457778776 59999999987643 356678999999999999999984 55 89999
Q ss_pred ecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEE
Q psy5825 351 VSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLA 426 (596)
Q Consensus 351 vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~ 426 (596)
+||++|||... .+.|+..+ . ..+.|+.||+++|.+++.++ .+++++
T Consensus 136 ~SS~~v~g~~~~~~~~E~~~~-----------------------------~-p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 185 (335)
T 1rpn_A 136 ASTSEMFGLIQAERQDENTPF-----------------------------Y-PRSPYGVAKLYGHWITVNYRESFGLHAS 185 (335)
T ss_dssp EEEGGGGCSCSSSSBCTTSCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EeCHHHhCCCCCCCCCcccCC-----------------------------C-CCChhHHHHHHHHHHHHHHHHHcCCcEE
Confidence 99999998643 23332110 0 23679999999999999887 699999
Q ss_pred EecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc-eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCC
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI-HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPAS 505 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~-~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~ 505 (596)
|+||++|||+...+ ++.. .....++..+..|.. ..++++++..++||||+|+|++++.++...
T Consensus 186 i~r~~~v~Gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~g~~~~~~i~v~Dva~a~~~~~~~~------------ 249 (335)
T 1rpn_A 186 SGILFNHESPLRGI--EFVT--RKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD------------ 249 (335)
T ss_dssp EEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS------------
T ss_pred EEeeCcccCCCCCC--Ccch--HHHHHHHHHHHcCCCceEEeCCCcceeceEEHHHHHHHHHHHHhcC------------
Confidence 99999999985421 0000 001233444455543 235677889999999999999999998642
Q ss_pred cCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 506 LVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 506 ~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++++.||++.+.+.++
T Consensus 250 --------~~~~~ni~~~--~~~s~~e~~~~i~~~~g 276 (335)
T 1rpn_A 250 --------KADDYVVATG--VTTTVRDMCQIAFEHVG 276 (335)
T ss_dssp --------SCCCEEECCS--CEEEHHHHHHHHHHTTT
T ss_pred --------CCCEEEEeCC--CCccHHHHHHHHHHHhC
Confidence 2469999998 88999999999999887
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=99.90 E-value=1.4e-23 Score=215.74 Aligned_cols=207 Identities=17% Similarity=0.097 Sum_probs=153.8
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh--hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD--ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~--~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
++.++.||++++ +.+..++. ++|+||||||..... .+...++.+|+.||.+|+++|.. .++++|||+||
T Consensus 46 ~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~SS 118 (312)
T 2yy7_A 46 SGPFEVVNALDF------NQIEHLVEVHKITDIYLMAALLSATAEKNPAFAWDLNMNSLFHVLNLAKA-KKIKKIFWPSS 118 (312)
T ss_dssp SSCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHT-TSCSEEECCEE
T ss_pred CCceEEecCCCH------HHHHHHHhhcCCCEEEECCccCCCchhhChHHHHHHHHHHHHHHHHHHHH-cCCCEEEEecc
Confidence 567899999864 45888887 899999999986542 34567899999999999999998 57899999999
Q ss_pred cccccCCc---cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEe
Q psy5825 354 LYTHSYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMV 428 (596)
Q Consensus 354 ~~v~g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~Il 428 (596)
.++||... .++|+. + .. ..+.|+.||+++|++++.++ .|++++|+
T Consensus 119 ~~~~~~~~~~~~~~e~~--------------------------~---~~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~l 168 (312)
T 2yy7_A 119 IAVFGPTTPKENTPQYT--------------------------I---ME-PSTVYGISKQAGERWCEYYHNIYGVDVRSI 168 (312)
T ss_dssp GGGCCTTSCSSSBCSSC--------------------------B---CC-CCSHHHHHHHHHHHHHHHHHHHHCCEEECE
T ss_pred HHHhCCCCCCCCccccC--------------------------c---CC-CCchhHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 99998632 222211 0 01 33679999999999998876 69999999
Q ss_pred cCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 429 RPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 429 Rp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
||++|||+...|..+. ......++...+.+....++++++..++||||+|+|++++.++.......
T Consensus 169 rp~~v~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~~~~----------- 234 (312)
T 2yy7_A 169 RYPGLISWSTPPGGGT---TDYAVDIFYKAIADKKYECFLSSETKMPMMYMDDAIDATINIMKAPVEKI----------- 234 (312)
T ss_dssp EECEEECSSSCCCSCT---TTHHHHHHHHHHHTSEEEESSCTTCCEEEEEHHHHHHHHHHHHHSCGGGC-----------
T ss_pred eCCeEecCCCCCCCch---hhhHHHHHHHHHcCCCeEEecCCCceeeeeeHHHHHHHHHHHHhCccccc-----------
Confidence 9999999865432110 11123344443333223455677889999999999999999987643210
Q ss_pred CCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 509 PIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||+++ ..+|+.||++.+.+.++
T Consensus 235 ----~~~~~~ni~~---~~~s~~e~~~~i~~~~~ 261 (312)
T 2yy7_A 235 ----KIHSSYNLAA---MSFTPTEIANEIKKHIP 261 (312)
T ss_dssp ----CCSSCEECCS---EEECHHHHHHHHHTTCT
T ss_pred ----ccCceEEeCC---CccCHHHHHHHHHHHCC
Confidence 1247999985 57999999999998876
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.6e-23 Score=218.08 Aligned_cols=220 Identities=13% Similarity=0.037 Sum_probs=155.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChhh---hH---HHHHHHHHHHHHHHHHHHHhcCCC-ce
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFDE---LI---QDAFTLNIQATRELLDLATRCSQL-KA 347 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~~---~~---~~~~~~NV~GT~~LL~~a~~~~~v-kr 347 (596)
.++.++.|||+++ +.+..++.+ +|+||||||.+.... +. ..++.+|+.||.+|+++|... ++ ++
T Consensus 77 ~~v~~~~~Dl~d~------~~~~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~-~~~~~ 149 (404)
T 1i24_A 77 KSIELYVGDICDF------EFLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEF-GEECH 149 (404)
T ss_dssp CCCEEEESCTTSH------HHHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHH-CTTCE
T ss_pred CceEEEECCCCCH------HHHHHHHhccCCCEEEECCCCCCccchhhCccchhhhHHHHHHHHHHHHHHHHHh-CCCcE
Confidence 5789999999864 457888887 999999999876432 12 247799999999999999984 55 59
Q ss_pred EEEecCcccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 348 ILHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 348 fV~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
|||+||++|||... .+.|+.++.. +.......+. ... ..+.|+.||+++|++++.++ .|++
T Consensus 150 ~V~~SS~~vyg~~~~~~~E~~~~~~--------------~~~~~~~~~~-~~~-~~~~Y~~sK~~~e~~~~~~~~~~gi~ 213 (404)
T 1i24_A 150 LVKLGTMGEYGTPNIDIEEGYITIT--------------HNGRTDTLPY-PKQ-ASSFYHLSKVHDSHNIAFTCKAWGIR 213 (404)
T ss_dssp EEEECCGGGGCCCSSCBCSSEEEEE--------------ETTEEEEEEC-CCC-CCSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred EEEeCcHHHhCCCCCCCCccccccc--------------cccccccccC-CCC-CCChhHHHHHHHHHHHHHHHHhcCCe
Confidence 99999999998643 2333211000 0000000000 001 34689999999999999876 6999
Q ss_pred EEEecCCccccCCCCCc---cccCCCC-------CCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 425 LAMVRPSIVVSTWKEPI---VGWSNNL-------YGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~---~G~~~~~-------~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
++|+||++|||+...+. +++.+.. ..+..++..+..|....+++++...++||||+|||++++.++....
T Consensus 214 ~~ivrp~~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~g~~~~~~i~v~Dva~a~~~~l~~~~ 293 (404)
T 1i24_A 214 ATDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPA 293 (404)
T ss_dssp EEEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCC
T ss_pred EEEEecceeeCCCCCccccccccccccccccchhhHHHHHHHHHHcCCeeEEeCCCCceECcEEHHHHHHHHHHHHhCcc
Confidence 99999999999876431 1121111 1123455556666555567888899999999999999999986532
Q ss_pred ccCCCCCCCCCcCCCCCCCCC--CeEEccCCCCCcccHHHHHHHHHHH
Q psy5825 495 LDHGHVAPPASLVAPIPRTDP--PVYNLSISSSYPITWLEYMNSVQAA 540 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~--~vyni~~~~~~~vt~~el~~~l~~~ 540 (596)
. .+ ++||+++ .++++.+|++.|.+.
T Consensus 294 ~------------------~g~~~~yni~~---~~~s~~e~~~~i~~~ 320 (404)
T 1i24_A 294 K------------------AGEFRVFNQFT---EQFSVNELASLVTKA 320 (404)
T ss_dssp C------------------TTCEEEEEECS---EEEEHHHHHHHHHHH
T ss_pred c------------------CCCceEEEECC---CCCcHHHHHHHHHHH
Confidence 1 24 6999986 469999999999987
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=4.5e-23 Score=216.52 Aligned_cols=211 Identities=20% Similarity=0.161 Sum_probs=156.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhc-CCCc----
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRC-SQLK---- 346 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~-~~vk---- 346 (596)
.++.++.|||+++ +.+..+++ ++|+||||||..... ..+..++.+|+.||.+|+++|... .+++
T Consensus 50 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~~~~v~~~~~ 123 (361)
T 1kew_A 50 NRYNFEHADICDS------AEITRIFEQYQPDAVMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKK 123 (361)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHH
T ss_pred CCeEEEECCCCCH------HHHHHHHhhcCCCEEEECCCCcChhhhhhCHHHHHHHHHHHHHHHHHHHHHhccCcccccc
Confidence 4799999999965 45788887 899999999987643 234568899999999999999972 1566
Q ss_pred ---eEEEecCcccccCCcc---ccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 347 ---AILHVSTLYTHSYRED---IQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 347 ---rfV~vSS~~v~g~~~~---i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
+|||+||++|||.... +.+.....+ ++|. .+ .. ..+.|+.||+++|.+++.++
T Consensus 124 ~~~~iv~~SS~~v~g~~~~~~~~~~~~~~~~------------~~E~-----~~---~~-~~~~Y~~sK~~~e~~~~~~~ 182 (361)
T 1kew_A 124 NNFRFHHISTDEVYGDLPHPDEVENSVTLPL------------FTET-----TA---YA-PSSPYSASKASSDHLVRAWR 182 (361)
T ss_dssp HHCEEEEEEEGGGGCCCCCGGGSCTTSCCCC------------BCTT-----SC---CC-CCSHHHHHHHHHHHHHHHHH
T ss_pred cCceEEEeCCHHHhCCCcccccccccccCCC------------CCCC-----CC---CC-CCCccHHHHHHHHHHHHHHH
Confidence 9999999999986420 000000000 0110 01 01 33689999999999999887
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
.|++++|+||++|||+...+. .....++..+..|....+++++...++|+||+|||++++.++...
T Consensus 183 ~~~gi~~~~vrp~~v~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~----- 250 (361)
T 1kew_A 183 RTYGLPTIVTNCSNNYGPYHFPE-------KLIPLVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEG----- 250 (361)
T ss_dssp HHHCCCEEEEEECEEESTTCCTT-------SHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHC-----
T ss_pred HHhCCcEEEEeeceeECCCCCcc-------cHHHHHHHHHHcCCCceEcCCCceeEeeEEHHHHHHHHHHHHhCC-----
Confidence 699999999999999864210 112334455555654456677888999999999999999988642
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||+++ .++++.+|++.|.+.++
T Consensus 251 --------------~~g~~~~v~~~--~~~s~~e~~~~i~~~~g 278 (361)
T 1kew_A 251 --------------KAGETYNIGGH--NEKKNLDVVFTICDLLD 278 (361)
T ss_dssp --------------CTTCEEEECCC--CEEEHHHHHHHHHHHHH
T ss_pred --------------CCCCEEEecCC--CeeeHHHHHHHHHHHhC
Confidence 24789999998 88999999999999877
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=99.90 E-value=7.7e-23 Score=214.62 Aligned_cols=209 Identities=14% Similarity=0.056 Sum_probs=153.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.|||+++ +.+..++.+ +|+||||||..... ..+..++.+|+.||.+|+++|..+..+++|||+
T Consensus 57 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~v~~ 130 (357)
T 1rkx_A 57 DGMQSEIGDIRDQ------NKLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 130 (357)
T ss_dssp TTSEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEE
T ss_pred CceEEEEccccCH------HHHHHHHHhcCCCEEEECCCCcccccchhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEe
Confidence 5789999999965 447788876 89999999975432 345568899999999999999985448999999
Q ss_pred cCcccccCCc---cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--c-----
Q psy5825 352 STLYTHSYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--Y----- 421 (596)
Q Consensus 352 SS~~v~g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~----- 421 (596)
||++|||... .+.|+. + .. ..+.|+.||+++|++++.++ .
T Consensus 131 SS~~vyg~~~~~~~~~E~~--------------------------~---~~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 180 (357)
T 1rkx_A 131 TSDKCYDNKEWIWGYRENE--------------------------A---MG-GYDPYSNSKGCAELVTSSYRNSFFNPAN 180 (357)
T ss_dssp CCGGGBCCCCSSSCBCTTS--------------------------C---BC-CSSHHHHHHHHHHHHHHHHHHHHSCGGG
T ss_pred cCHHHhCCCCcCCCCCCCC--------------------------C---CC-CCCccHHHHHHHHHHHHHHHHHHhhhhc
Confidence 9999998643 122210 0 01 33679999999999998876 2
Q ss_pred ----CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 422 ----KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 422 ----gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
|++++|+||++|||+...+. ......++..+..|....+ +++...++||||+|||++++.++.......
T Consensus 181 ~~~~gi~~~~lrp~~v~G~~~~~~------~~~~~~~~~~~~~g~~~~~-~~~~~~~~~v~v~Dva~a~~~~~~~~~~~~ 253 (357)
T 1rkx_A 181 YGQHGTAVATVRAGNVIGGGDWAL------DRIVPDILRAFEQSQPVII-RNPHAIRPWQHVLEPLSGYLLLAQKLYTDG 253 (357)
T ss_dssp HHHHCCEEEEEECCCEECTTCCCS------SCHHHHHHHHHHTTCCEEC-SCTTCEECCEETHHHHHHHHHHHHHHHHTC
T ss_pred cccCCceEEEEeeceeeCCCCCcc------ccHHHHHHHHHhcCCCEEE-CCCCCeeccEeHHHHHHHHHHHHHhhhhcC
Confidence 99999999999999754210 1112344445555554333 356788999999999999999886521000
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
...+++||++++...++++.+|++.|.+.++
T Consensus 254 --------------~~~~~~~ni~~~~~~~~s~~e~~~~i~~~~g 284 (357)
T 1rkx_A 254 --------------AEYAEGWNFGPNDADATPVKNIVEQMVKYWG 284 (357)
T ss_dssp --------------GGGCSEEECCCCGGGCEEHHHHHHHHHHHHC
T ss_pred --------------CCCCceEEECCCCCCcccHHHHHHHHHHHhC
Confidence 0146799999742268999999999999887
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.2e-22 Score=209.15 Aligned_cols=177 Identities=15% Similarity=0.080 Sum_probs=139.2
Q ss_pred cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHH
Q psy5825 304 HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLA 378 (596)
Q Consensus 304 ~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~ 378 (596)
++|+||||||..... .....++. |+.||.+|+++|.. .++++|||+||++|||... .+.|+...
T Consensus 69 ~~d~vi~~a~~~~~~~~~~~~~~~~~-n~~~~~~ll~a~~~-~~v~~~v~~SS~~v~~~~~~~~~~E~~~~--------- 137 (321)
T 3vps_A 69 DVRLVYHLASHKSVPRSFKQPLDYLD-NVDSGRHLLALCTS-VGVPKVVVGSTCEVYGQADTLPTPEDSPL--------- 137 (321)
T ss_dssp TEEEEEECCCCCCHHHHTTSTTTTHH-HHHHHHHHHHHHHH-HTCCEEEEEEEGGGGCSCSSSSBCTTSCC---------
T ss_pred cCCEEEECCccCChHHHHhCHHHHHH-HHHHHHHHHHHHHH-cCCCeEEEecCHHHhCCCCCCCCCCCCCC---------
Confidence 899999999987642 22233566 99999999999998 4689999999999998643 23332110
Q ss_pred HHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCC-CEEEecCCccccCCCCCccccCCCCCCcHHHH
Q psy5825 379 HVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKL-PLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAA 455 (596)
Q Consensus 379 ~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl-~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~ 455 (596)
. ..+.|+.||+.+|++++.++ .|+ +++|+||++|||+...+ ......++
T Consensus 138 --------------------~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilRp~~v~G~~~~~-------~~~~~~~~ 189 (321)
T 3vps_A 138 --------------------S-PRSPYAASKVGLEMVAGAHQRASVAPEVGIVRFFNVYGPGERP-------DALVPRLC 189 (321)
T ss_dssp --------------------C-CCSHHHHHHHHHHHHHHHHHHSSSSCEEEEEEECEEECTTCCT-------TSHHHHHH
T ss_pred --------------------C-CCChhHHHHHHHHHHHHHHHHHcCCCceEEEEeccccCcCCCC-------CChHHHHH
Confidence 0 33689999999999999988 789 99999999999986532 01233455
Q ss_pred HHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHH
Q psy5825 456 AGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMN 535 (596)
Q Consensus 456 ~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~ 535 (596)
..+..|....+++++...++||||+|+|++++.++... ..| +||++++ .+++|.||++
T Consensus 190 ~~~~~~~~~~~~~~~~~~~~~v~v~Dva~~~~~~~~~~-------------------~~g-~~~i~~~--~~~s~~e~~~ 247 (321)
T 3vps_A 190 ANLLTRNELPVEGDGEQRRDFTYITDVVDKLVALANRP-------------------LPS-VVNFGSG--QSLSVNDVIR 247 (321)
T ss_dssp HHHHHHSEEEEETTSCCEECEEEHHHHHHHHHHGGGSC-------------------CCS-EEEESCS--CCEEHHHHHH
T ss_pred HHHHcCCCeEEeCCCCceEceEEHHHHHHHHHHHHhcC-------------------CCC-eEEecCC--CcccHHHHHH
Confidence 55666665567788899999999999999999888653 235 9999999 8999999999
Q ss_pred HHHHHcc
Q psy5825 536 SVQAAGK 542 (596)
Q Consensus 536 ~l~~~~~ 542 (596)
.+. .++
T Consensus 248 ~i~-~~g 253 (321)
T 3vps_A 248 ILQ-ATS 253 (321)
T ss_dssp HHH-TTC
T ss_pred HHH-HhC
Confidence 999 887
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=1.3e-22 Score=208.82 Aligned_cols=201 Identities=19% Similarity=0.150 Sum_probs=152.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.+||+++ +.+..+++ ++|+||||||..... .....++.+|+.||.+|+++|.. .++++|||+
T Consensus 43 ~~~~~~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~~~~~iv~~ 115 (311)
T 2p5y_A 43 KGVPFFRVDLRDK------EGVERAFREFRPTHVSHQAAQASVKVSVEDPVLDFEVNLLGGLNLLEACRQ-YGVEKLVFA 115 (311)
T ss_dssp TTCCEECCCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEE
T ss_pred cCeEEEECCCCCH------HHHHHHHHhcCCCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHH-hCCCEEEEe
Confidence 3577889999864 34777777 799999999987643 33456889999999999999998 578999999
Q ss_pred cCc-ccccC-Cc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCE
Q psy5825 352 STL-YTHSY-RE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPL 425 (596)
Q Consensus 352 SS~-~v~g~-~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~ 425 (596)
||. ++||. .. .+.|+..+ . ..+.|+.||+++|++++.++ .|+++
T Consensus 116 SS~~~~~g~~~~~~~~~E~~~~-----------------------------~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~ 165 (311)
T 2p5y_A 116 STGGAIYGEVPEGERAEETWPP-----------------------------R-PKSPYAASKAAFEHYLSVYGQSYGLKW 165 (311)
T ss_dssp EEHHHHHCCCCTTCCBCTTSCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred CCChhhcCCCCCCCCcCCCCCC-----------------------------C-CCChHHHHHHHHHHHHHHHHHHcCCCE
Confidence 999 88875 21 22221100 0 23679999999999999876 79999
Q ss_pred EEecCCccccCCCCCccccCCCCCC-cHHHHHHHHhccceEee-----cCCCCccccccHHHHHHHHHHHHHhhhccCCC
Q psy5825 426 AMVRPSIVVSTWKEPIVGWSNNLYG-PGGAAAGAALGLIHTFY-----AKHDKKCDLIPVDVATNMMLGVVWKTALDHGH 499 (596)
Q Consensus 426 ~IlRp~~V~G~~~~p~~G~~~~~~~-~~~l~~~~~~g~~~~~~-----~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~ 499 (596)
+|+||++|||+...+.. ..+ ...++..+..|....++ +++...++|+||+|+|++++.++...
T Consensus 166 ~~lrp~~v~Gp~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~i~v~Dva~a~~~~~~~~------ 234 (311)
T 2p5y_A 166 VSLRYGNVYGPRQDPHG-----EAGVVAIFAERVLKGLPVTLYARKTPGDEGCVRDYVYVGDVAEAHALALFSL------ 234 (311)
T ss_dssp EEEEECEEECTTCCSSS-----TTHHHHHHHHHHHHTCCEEEECSSSTTSCCCEECEEEHHHHHHHHHHHHHHC------
T ss_pred EEEeeccccCcCCCCCC-----cCcHHHHHHHHHHcCCCcEEEecccCCCCCeEEeeEEHHHHHHHHHHHHhCC------
Confidence 99999999998653210 011 12233444455544455 77788899999999999999888541
Q ss_pred CCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 500 VAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 500 ~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+++||++++ .++|+.||++.+.+.++
T Consensus 235 ---------------~~~~~i~~~--~~~s~~e~~~~i~~~~g 260 (311)
T 2p5y_A 235 ---------------EGIYNVGTG--EGHTTREVLMAVAEAAG 260 (311)
T ss_dssp ---------------CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred ---------------CCEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 569999998 89999999999999887
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=207.06 Aligned_cols=197 Identities=16% Similarity=0.080 Sum_probs=138.9
Q ss_pred EEeccCCCCCCCCHHHHHHHhcc-----ccEEEEcCccCCh-hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 282 ISGDISQPSLGISSHDQQFIQHH-----IHVIIHAAASLRF-DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 282 v~GDl~~~~lGL~~~~~~~l~~~-----vd~ViH~AA~v~~-~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
+.||++++ +.+..++++ +|+||||||.... ..+...++.+|+.||.+|+++|... ++ +|||+||++
T Consensus 47 ~~~d~~~~------~~~~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~ 118 (310)
T 1eq2_A 47 IADYMDKE------DFLIQIMAGEEFGDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-EI-PFLYASSAA 118 (310)
T ss_dssp CSEEEEHH------HHHHHHHTTCCCSSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHHH-TC-CEEEEEEGG
T ss_pred eccccccH------HHHHHHHhccccCCCcEEEECcccccCcccCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEeeHH
Confidence 66888754 347777765 9999999998764 3456778999999999999999984 67 999999999
Q ss_pred cccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCC
Q psy5825 356 THSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPS 431 (596)
Q Consensus 356 v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~ 431 (596)
|||... .++|+. + .. ..+.|+.+|+++|++++.++ .|++++|+||+
T Consensus 119 v~g~~~~~~~~E~~--------------------------~---~~-p~~~Y~~sK~~~e~~~~~~~~~~g~~~~~lrp~ 168 (310)
T 1eq2_A 119 TYGGRTSDFIESRE--------------------------Y---EK-PLNVYGYSKFLFDEYVRQILPEANSQIVGFRYF 168 (310)
T ss_dssp GGTTCCSCBCSSGG--------------------------G---CC-CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEEC
T ss_pred HhCCCCCCCCCCCC--------------------------C---CC-CCChhHHHHHHHHHHHHHHHHHcCCCEEEEeCC
Confidence 998643 222221 1 01 33679999999999999987 68999999999
Q ss_pred ccccCCCCCccccCCCCCCc-HHHHHHHHhccceEeecCCCC-ccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 432 IVVSTWKEPIVGWSNNLYGP-GGAAAGAALGLIHTFYAKHDK-KCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 432 ~V~G~~~~p~~G~~~~~~~~-~~l~~~~~~g~~~~~~~~~~~-~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
+|||+...+.. ..... ..++..+..|....+++++.. .++||||+|+|++++.++...
T Consensus 169 ~v~G~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~i~v~Dva~~~~~~~~~~---------------- 228 (310)
T 1eq2_A 169 NVYGPREGHKG----SMASVAFHLNTQLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG---------------- 228 (310)
T ss_dssp EEESSSCGGGG----GGSCHHHHHHHHHHC-------------CBCEEEHHHHHHHHHHHHHHC----------------
T ss_pred cEECcCCCCCC----ccchHHHHHHHHHHcCCCcEEecCCCcceEccEEHHHHHHHHHHHHhcC----------------
Confidence 99998653211 11122 234444455544345667777 899999999999999988653
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
. +++||++++ .++|+.||++.+.+.++
T Consensus 229 ---~-~~~~~i~~~--~~~s~~e~~~~i~~~~g 255 (310)
T 1eq2_A 229 ---V-SGIFNLGTG--RAESFQAVADATLAYHK 255 (310)
T ss_dssp ---C-CEEEEESCS--CCBCHHHHHHHC-----
T ss_pred ---C-CCeEEEeCC--CccCHHHHHHHHHHHcC
Confidence 2 669999998 88999999999999887
|
| >3ajr_A NDP-sugar epimerase; L-threonine dehydrogenase, L-3- hydroxynorvaline, oxidoreductase; HET: NAD; 1.77A {Thermoplasma volcanium} PDB: 3a9w_A* 3a4v_A* 3a1n_A* | Back alignment and structure |
|---|
Probab=99.89 E-value=2.5e-22 Score=207.02 Aligned_cols=243 Identities=15% Similarity=0.101 Sum_probs=165.6
Q ss_pred EEeCCCCcccHHHHHHHHhhh-hhHHHhhh-hhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCC
Q psy5825 241 ILLRSKKNKTVQERLAEQFKD-ELFDRLKN-EQADILQRKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLR 316 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~-~~~~~l~~-~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~ 316 (596)
+||.+.+|.-+..-+..++.. ..+..+-. ..+... .++.++.||++++ +.+..++. ++|+||||||...
T Consensus 2 vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~-~~~~~~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~ 74 (317)
T 3ajr_A 2 ILVTGSSGQIGTELVPYLAEKYGKKNVIASDIVQRDT-GGIKFITLDVSNR------DEIDRAVEKYSIDAIFHLAGILS 74 (317)
T ss_dssp EEEESTTSTTHHHHHHHHHHHHCGGGEEEEESSCCCC-TTCCEEECCTTCH------HHHHHHHHHTTCCEEEECCCCCH
T ss_pred EEEEcCCcHHHHHHHHHHHHhcCCCEEEEecCCCccc-cCceEEEecCCCH------HHHHHHHhhcCCcEEEECCcccC
Confidence 466666666666555555443 11111000 000001 2467889999864 45777777 8999999999865
Q ss_pred h--hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc---cccccccCCCCChHHHHHHHhcCChHHHHh
Q psy5825 317 F--DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEI 391 (596)
Q Consensus 317 ~--~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~ 391 (596)
. ...+..++.+|+.||.+|+++|.. .++++|||+||+++|+... .++|+.
T Consensus 75 ~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~~v~~SS~~~~~~~~~~~~~~e~~------------------------ 129 (317)
T 3ajr_A 75 AKGEKDPALAYKVNMNGTYNILEAAKQ-HRVEKVVIPSTIGVFGPETPKNKVPSIT------------------------ 129 (317)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEEEEGGGCCTTSCSSSBCSSS------------------------
T ss_pred CccccChHHHhhhhhHHHHHHHHHHHH-cCCCEEEEecCHHHhCCCCCCCCccccc------------------------
Confidence 3 234567889999999999999998 5789999999999998632 122211
Q ss_pred hhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecC
Q psy5825 392 LSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAK 469 (596)
Q Consensus 392 ~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~ 469 (596)
+ .. ..+.|+.||+++|++++.++ .|++++|+||+.|||+...|..++. .....++...+.+....++++
T Consensus 130 --~---~~-p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~~~g~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~ 200 (317)
T 3ajr_A 130 --I---TR-PRTMFGVTKIAAELLGQYYYEKFGLDVRSLRYPGIISYKAEPTAGTT---DYAVEIFYYAVKREKYKCYLA 200 (317)
T ss_dssp --C---CC-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEECSSSCCCSCSS---THHHHHHHHHHTTCCEEECSC
T ss_pred --c---CC-CCchHHHHHHHHHHHHHHHHHhcCCeEEEEecCcEeccCCCCCCcch---hHHHHHHHHHHhCCCceeecC
Confidence 0 01 33679999999999998876 7999999999999997654321111 112233444333322344566
Q ss_pred CCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 470 HDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 470 ~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
++..++||||+|+|++++.++....... ..+++||+++ ..+++.+|++.+.+.++
T Consensus 201 ~~~~~~~i~v~Dva~a~~~~l~~~~~~~---------------~~g~~~~i~~---~~~s~~e~~~~i~~~~~ 255 (317)
T 3ajr_A 201 PNRALPMMYMPDALKALVDLYEADRDKL---------------VLRNGYNVTA---YTFTPSELYSKIKERIP 255 (317)
T ss_dssp TTCCEEEEEHHHHHHHHHHHHHCCGGGC---------------SSCSCEECCS---EEECHHHHHHHHHTTCC
T ss_pred ccceeeeeEHHHHHHHHHHHHhCCcccc---------------ccCceEecCC---ccccHHHHHHHHHHHCC
Confidence 7788999999999999999887543210 1357999986 46999999999998776
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=99.89 E-value=1.8e-22 Score=205.07 Aligned_cols=178 Identities=13% Similarity=0.061 Sum_probs=137.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEecCcc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRC-SQLKAILHVSTLY 355 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~ 355 (596)
.+++++.||+++.. +.++|+||||||......+ .+.+|+++|... .++++|||+||++
T Consensus 47 ~~~~~~~~D~~d~~-----------~~~~d~vi~~a~~~~~~~~----------~~~~l~~a~~~~~~~~~~~v~~Ss~~ 105 (286)
T 3ius_A 47 SGAEPLLWPGEEPS-----------LDGVTHLLISTAPDSGGDP----------VLAALGDQIAARAAQFRWVGYLSTTA 105 (286)
T ss_dssp TTEEEEESSSSCCC-----------CTTCCEEEECCCCBTTBCH----------HHHHHHHHHHHTGGGCSEEEEEEEGG
T ss_pred CCCeEEEecccccc-----------cCCCCEEEECCCccccccH----------HHHHHHHHHHhhcCCceEEEEeecce
Confidence 57999999999722 5789999999998765422 257888988874 4789999999999
Q ss_pred cccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCcc
Q psy5825 356 THSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIV 433 (596)
Q Consensus 356 v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V 433 (596)
|||... .+.|+..+ . ..+.|+.+|+.+|++++.+ .|++++|+||++|
T Consensus 106 vyg~~~~~~~~E~~~~-----------------------------~-p~~~Y~~sK~~~E~~~~~~-~~~~~~ilRp~~v 154 (286)
T 3ius_A 106 VYGDHDGAWVDETTPL-----------------------------T-PTAARGRWRVMAEQQWQAV-PNLPLHVFRLAGI 154 (286)
T ss_dssp GGCCCTTCEECTTSCC-----------------------------C-CCSHHHHHHHHHHHHHHHS-TTCCEEEEEECEE
T ss_pred ecCCCCCCCcCCCCCC-----------------------------C-CCCHHHHHHHHHHHHHHhh-cCCCEEEEeccce
Confidence 998643 23332110 0 2367999999999999987 7999999999999
Q ss_pred ccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCC
Q psy5825 434 VSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRT 513 (596)
Q Consensus 434 ~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (596)
||+...++ ..+..|....++++ ...++||||+|+|++++.++....
T Consensus 155 ~G~~~~~~--------------~~~~~~~~~~~~~~-~~~~~~i~v~Dva~a~~~~~~~~~------------------- 200 (286)
T 3ius_A 155 YGPGRGPF--------------SKLGKGGIRRIIKP-GQVFSRIHVEDIAQVLAASMARPD------------------- 200 (286)
T ss_dssp EBTTBSSS--------------TTSSSSCCCEEECT-TCCBCEEEHHHHHHHHHHHHHSCC-------------------
T ss_pred ECCCchHH--------------HHHhcCCccccCCC-CcccceEEHHHHHHHHHHHHhCCC-------------------
Confidence 99864321 11223444344443 578899999999999999987642
Q ss_pred CCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 514 DPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 514 ~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++++.||++.+.+.++
T Consensus 201 ~g~~~~i~~~--~~~s~~e~~~~i~~~~g 227 (286)
T 3ius_A 201 PGAVYNVCDD--EPVPPQDVIAYAAELQG 227 (286)
T ss_dssp TTCEEEECCS--CCBCHHHHHHHHHHHHT
T ss_pred CCCEEEEeCC--CCccHHHHHHHHHHHcC
Confidence 4679999999 88999999999999888
|
| >3st7_A Capsular polysaccharide synthesis enzyme CAP5F; rossmann fold, cupid domain, short-chain dehydrogenase/reduc NADPH; 2.45A {Staphylococcus aureus} PDB: 2zkl_A 3vhr_A | Back alignment and structure |
|---|
Probab=99.89 E-value=7.1e-23 Score=216.18 Aligned_cols=211 Identities=18% Similarity=0.125 Sum_probs=163.6
Q ss_pred EEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhh
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDEL 320 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~ 320 (596)
+||.+.+|.-+..-+..++.. ..++++.+|+. .+.+.+..+++++|+||||||..... .
T Consensus 3 VlVtGatG~iG~~l~~~L~~~---------------g~~~v~~~d~~-----~d~~~l~~~~~~~d~Vih~a~~~~~~-~ 61 (369)
T 3st7_A 3 IVITGAKGFVGKNLKADLTST---------------TDHHIFEVHRQ-----TKEEELESALLKADFIVHLAGVNRPE-H 61 (369)
T ss_dssp EEEETTTSHHHHHHHHHHHHH---------------CCCEEEECCTT-----CCHHHHHHHHHHCSEEEECCCSBCTT-C
T ss_pred EEEECCCCHHHHHHHHHHHhC---------------CCCEEEEECCC-----CCHHHHHHHhccCCEEEECCcCCCCC-C
Confidence 577777777666555554431 22478888884 35667999999999999999987643 3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhcCCCc-eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCC
Q psy5825 321 IQDAFTLNIQATRELLDLATRCSQLK-AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGG 399 (596)
Q Consensus 321 ~~~~~~~NV~GT~~LL~~a~~~~~vk-rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~ 399 (596)
...++.+|+.|+.+|+++|.. .+++ +|||+||+++|+.
T Consensus 62 ~~~~~~~n~~~~~~l~~a~~~-~~~~~~~v~~Ss~~~~~~---------------------------------------- 100 (369)
T 3st7_A 62 DKEFSLGNVSYLDHVLDILTR-NTKKPAILLSSSIQATQD---------------------------------------- 100 (369)
T ss_dssp STTCSSSCCBHHHHHHHHHTT-CSSCCEEEEEEEGGGGSC----------------------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHH-hCCCCeEEEeCchhhcCC----------------------------------------
Confidence 345778899999999999998 4666 9999999998761
Q ss_pred CCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcH-HHHHHHHhccceEeecCCCCcccc
Q psy5825 400 IYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPG-GAAAGAALGLIHTFYAKHDKKCDL 476 (596)
Q Consensus 400 ~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~-~l~~~~~~g~~~~~~~~~~~~~d~ 476 (596)
+.|+.+|+++|++++.++ .|++++|+||++|||++..+. ++... .++..+..|... ..++++..++|
T Consensus 101 ---~~Y~~sK~~~E~~~~~~~~~~g~~~~i~R~~~v~G~~~~~~------~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~ 170 (369)
T 3st7_A 101 ---NPYGESKLQGEQLLREYAEEYGNTVYIYRWPNLFGKWCKPN------YNSVIATFCYKIARNEEI-QVNDRNVELTL 170 (369)
T ss_dssp ---SHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEECTTCCTT------SSCHHHHHHHHHHTTCCC-CCSCTTCEEEE
T ss_pred ---CCchHHHHHHHHHHHHHHHHhCCCEEEEECCceeCCCCCCC------cchHHHHHHHHHHcCCCe-EecCCCeEEEE
Confidence 469999999999999987 799999999999999876432 12233 344444455432 33567889999
Q ss_pred ccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 477 IPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 477 ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
|||||||++++.++..... ..+++||++++ ..+||.|+++.+.+.++
T Consensus 171 i~v~Dva~~~~~~l~~~~~-----------------~~~~~~~i~~~--~~~s~~e~~~~~~~~~g 217 (369)
T 3st7_A 171 NYVDDIVAEIKRAIEGTPT-----------------IENGVPTVPNV--FKVTLGEIVDLLYKFKQ 217 (369)
T ss_dssp EEHHHHHHHHHHHHHTCCC-----------------EETTEECCSCC--EEEEHHHHHHHHHHHHH
T ss_pred EEHHHHHHHHHHHHhCCcc-----------------cCCceEEeCCC--CceeHHHHHHHHHHHhC
Confidence 9999999999999876432 12789999998 89999999999999887
|
| >3gpi_A NAD-dependent epimerase/dehydratase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.44A {Methylobacillus flagellatus KT} | Back alignment and structure |
|---|
Probab=99.88 E-value=2.3e-23 Score=211.97 Aligned_cols=189 Identities=11% Similarity=0.061 Sum_probs=144.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc-ccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH-IHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~-vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
.++.++.||++++.. +..++.+ +|+||||||... .....++.+|+.||.+|+++|.. .++++|||+||++
T Consensus 41 ~~~~~~~~Dl~d~~~------~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~ll~a~~~-~~~~~~v~~SS~~ 111 (286)
T 3gpi_A 41 AGVQTLIADVTRPDT------LASIVHLRPEILVYCVAASE--YSDEHYRLSYVEGLRNTLSALEG-APLQHVFFVSSTG 111 (286)
T ss_dssp TTCCEEECCTTCGGG------CTTGGGGCCSEEEECHHHHH--HC-----CCSHHHHHHHHHHTTT-SCCCEEEEEEEGG
T ss_pred cCCceEEccCCChHH------HHHhhcCCCCEEEEeCCCCC--CCHHHHHHHHHHHHHHHHHHHhh-CCCCEEEEEcccE
Confidence 578899999997654 6667777 999999999743 34556788999999999999998 6889999999999
Q ss_pred cccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCcc
Q psy5825 356 THSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIV 433 (596)
Q Consensus 356 v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V 433 (596)
|||... .+.|+..+ . ..+.|+.||+++|++ +.+ ++++|+||++|
T Consensus 112 vyg~~~~~~~~E~~~~-----------------------------~-p~~~Y~~sK~~~E~~-~~~---~~~~ilR~~~v 157 (286)
T 3gpi_A 112 VYGQEVEEWLDEDTPP-----------------------------I-AKDFSGKRMLEAEAL-LAA---YSSTILRFSGI 157 (286)
T ss_dssp GCCCCCSSEECTTSCC-----------------------------C-CCSHHHHHHHHHHHH-GGG---SSEEEEEECEE
T ss_pred EEcCCCCCCCCCCCCC-----------------------------C-CCChhhHHHHHHHHH-Hhc---CCeEEEecccc
Confidence 999643 23332110 0 236799999999999 654 99999999999
Q ss_pred ccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCC
Q psy5825 434 VSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRT 513 (596)
Q Consensus 434 ~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (596)
||+... .++..+.. ...++++...++||||+|+|++++.++...... .
T Consensus 158 ~G~~~~-------------~~~~~~~~---~~~~~~~~~~~~~i~v~Dva~~~~~~~~~~~~~----------------~ 205 (286)
T 3gpi_A 158 YGPGRL-------------RMIRQAQT---PEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHA----------------V 205 (286)
T ss_dssp EBTTBC-------------HHHHHTTC---GGGSCSSBCEECEEEHHHHHHHHHHHHHHHTTS----------------C
T ss_pred cCCCch-------------hHHHHHHh---cccCCCcCceeEEEEHHHHHHHHHHHHhhhccC----------------C
Confidence 997531 22322222 123466788899999999999999999774211 2
Q ss_pred CCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 514 DPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 514 ~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++++.||++.+.+.++
T Consensus 206 ~~~~~~~~~~--~~~s~~e~~~~i~~~~g 232 (286)
T 3gpi_A 206 PERLYIVTDN--QPLPVHDLLRWLADRQG 232 (286)
T ss_dssp CCSEEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred CCceEEEeCC--CCCCHHHHHHHHHHHcC
Confidence 5789999998 89999999999999988
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=5.8e-22 Score=208.06 Aligned_cols=238 Identities=14% Similarity=0.052 Sum_probs=167.4
Q ss_pred EEEeCCCCcccHHHHHHHHhhhhhHHH--h-hhhh---hhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc-----cccEE
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDELFDR--L-KNEQ---ADILQRKVHIISGDISQPSLGISSHDQQFIQH-----HIHVI 308 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~~~~~--l-~~~~---~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~-----~vd~V 308 (596)
.+||.+.+|.-+..-+..++..+.+.. + +... ...+ ..+. +.+|++++ +.+..+++ ++|+|
T Consensus 48 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~-~~~~-~~~d~~~~------~~~~~~~~~~~~~~~d~V 119 (357)
T 2x6t_A 48 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNL-VDLN-IADYMDKE------DFLIQIMAGEEFGDVEAI 119 (357)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGGGGGT-TTSC-CSEEEEHH------HHHHHHHTTCCCSSCCEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcchhhcc-cCce-EeeecCcH------HHHHHHHhhcccCCCCEE
Confidence 467778777777666666654321100 0 0000 0011 1233 56777643 34777776 59999
Q ss_pred EEcCccCCh-hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCC
Q psy5825 309 IHAAASLRF-DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTN 385 (596)
Q Consensus 309 iH~AA~v~~-~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~ 385 (596)
|||||.... ...+..++.+|+.||.+|+++|.. .++ +|||+||++|||... .++|+.
T Consensus 120 ih~A~~~~~~~~~~~~~~~~n~~~~~~ll~a~~~-~~~-r~V~~SS~~v~g~~~~~~~~E~~------------------ 179 (357)
T 2x6t_A 120 FHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLE-REI-PFLYASSAATYGGRTSDFIESRE------------------ 179 (357)
T ss_dssp EECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHH-HTC-CEEEEEEGGGGCSCSSCCCSSGG------------------
T ss_pred EECCcccCCccCCHHHHHHHHHHHHHHHHHHHHH-cCC-eEEEEcchHHhCCCCCCCcCCcC------------------
Confidence 999998764 345677899999999999999998 467 999999999998643 222221
Q ss_pred hHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc
Q psy5825 386 QEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI 463 (596)
Q Consensus 386 e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~ 463 (596)
+ .. ..+.|+.||+++|++++.++ .|++++|+||++|||+...+.. ... .....++..+..|..
T Consensus 180 --------~---~~-p~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilRp~~v~Gp~~~~~~-~~~--~~~~~~~~~~~~~~~ 244 (357)
T 2x6t_A 180 --------Y---EK-PLNVFGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHKG-SMA--SVAFHLNTQLNNGES 244 (357)
T ss_dssp --------G---CC-CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCTTCG-GGS--CHHHHHHHHHHTTCC
T ss_pred --------C---CC-CCChhHHHHHHHHHHHHHHHHHcCCCEEEEecCeEECCCCCCCc-ccc--hHHHHHHHHHHcCCC
Confidence 1 01 33689999999999999987 6899999999999998653211 000 112334444555554
Q ss_pred eEeecCCCC-ccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 464 HTFYAKHDK-KCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 464 ~~~~~~~~~-~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++++.. .++||+|+|||++++.++... . +++||++++ .+++|.+|++.|.+.++
T Consensus 245 ~~~~~~~~~~~~~~i~v~Dva~ai~~~~~~~-------------------~-~~~~~i~~~--~~~s~~e~~~~i~~~~g 302 (357)
T 2x6t_A 245 PKLFEGSENFKRDFVYVGDVADVNLWFLENG-------------------V-SGIFNLGTG--RAESFQAVADATLAYHK 302 (357)
T ss_dssp CEEETTGGGCEECEEEHHHHHHHHHHHHHHC-------------------C-CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred cEEeCCCCcceEccEEHHHHHHHHHHHHhcC-------------------C-CCeEEecCC--CcccHHHHHHHHHHHcC
Confidence 456677777 889999999999999998653 2 679999998 89999999999999887
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.88 E-value=8.3e-22 Score=208.26 Aligned_cols=203 Identities=14% Similarity=0.033 Sum_probs=153.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCC---ceE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQL---KAI 348 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~v---krf 348 (596)
.++.++.|||+++ +.+..++.+ +|+||||||..... ..+..++.+|+.||.+|+++|.. .++ .+|
T Consensus 79 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~l~~a~~~-~~~~~~~~i 151 (375)
T 1t2a_A 79 GNMKLHYGDLTDS------TCLVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKT-CGLINSVKF 151 (375)
T ss_dssp -CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHH-TTCTTTCEE
T ss_pred CCceEEEccCCCH------HHHHHHHHhcCCCEEEECCCcccccccccCHHHHHHHHHHHHHHHHHHHHH-hCCCccceE
Confidence 4789999999864 457777776 59999999987653 34566889999999999999998 466 799
Q ss_pred EEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 349 LHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 349 V~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
||+||+++|+... .++|+..+ . ..+.|+.||+++|.+++.++ .+++
T Consensus 152 v~~SS~~~~~~~~~~~~~E~~~~-----------------------------~-~~~~Y~~sK~~~e~~~~~~~~~~~~~ 201 (375)
T 1t2a_A 152 YQASTSELYGKVQEIPQKETTPF-----------------------------Y-PRSPYGAAKLYAYWIVVNFREAYNLF 201 (375)
T ss_dssp EEEEEGGGTCSCSSSSBCTTSCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred EEecchhhhCCCCCCCCCccCCC-----------------------------C-CCChhHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999998643 23332100 0 23679999999999999887 6999
Q ss_pred EEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc-eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCC
Q psy5825 425 LAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI-HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPP 503 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~-~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~ 503 (596)
++|+||+++||+...+ ++.. ..+..++..+..|.. ..++++++..++||||+|||++++.++...
T Consensus 202 ~~i~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~---------- 267 (375)
T 1t2a_A 202 AVNGILFNHESPRRGA--NFVT--RKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND---------- 267 (375)
T ss_dssp EEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSS----------
T ss_pred EEEEecccccCCCCCC--Ccch--HHHHHHHHHHHcCCCceeEeCCCCceeeeEEHHHHHHHHHHHHhcC----------
Confidence 9999999999975421 1100 001223334445542 245677889999999999999999988642
Q ss_pred CCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 504 ASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 504 ~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++||.||++.|.+.++
T Consensus 268 ----------~~~~~ni~~~--~~~s~~e~~~~i~~~~g 294 (375)
T 1t2a_A 268 ----------EPEDFVIATG--EVHSVREFVEKSFLHIG 294 (375)
T ss_dssp ----------SCCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred ----------CCceEEEeCC--CcccHHHHHHHHHHHhC
Confidence 2469999998 88999999999999887
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.88 E-value=3.3e-21 Score=195.82 Aligned_cols=216 Identities=17% Similarity=0.148 Sum_probs=157.6
Q ss_pred EEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEE---EeccCCCCCCCCHHHHHHHhc--cccEEEEcCcc
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHII---SGDISQPSLGISSHDQQFIQH--HIHVIIHAAAS 314 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v---~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~ 314 (596)
.+||.+.+|.-+..-+..++..+ .+|..+ .+|+++ .+.+..++. ++|+||||||.
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g--------------~~V~~~~r~~~D~~d------~~~~~~~~~~~~~d~vi~~a~~ 66 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEE--------------YDIYPFDKKLLDITN------ISQVQQVVQEIRPHIIIHCAAY 66 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTT--------------EEEEEECTTTSCTTC------HHHHHHHHHHHCCSEEEECCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCC--------------CEEEEecccccCCCC------HHHHHHHHHhcCCCEEEECCcc
Confidence 46777777776665555544321 123332 366664 345788877 69999999999
Q ss_pred CChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHH
Q psy5825 315 LRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEEL 389 (596)
Q Consensus 315 v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~ 389 (596)
..... .+..++.+|+.||.+|+++|... ++ +|||+||++|||... .+.|+..+
T Consensus 67 ~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-~~-~~v~~SS~~vy~~~~~~~~~E~~~~-------------------- 124 (287)
T 3sc6_A 67 TKVDQAEKERDLAYVINAIGARNVAVASQLV-GA-KLVYISTDYVFQGDRPEGYDEFHNP-------------------- 124 (287)
T ss_dssp CCHHHHTTCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCCCCSSCBCTTSCC--------------------
T ss_pred cChHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchhhhcCCCCCCCCCCCCCC--------------------
Confidence 87543 56778999999999999999984 55 799999999998643 33332110
Q ss_pred HhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecC
Q psy5825 390 EILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAK 469 (596)
Q Consensus 390 ~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~ 469 (596)
. ..+.|+.+|+++|++++.+. .+++|+||++|||+...+ ....++..+..|....+++
T Consensus 125 ---------~-p~~~Y~~sK~~~E~~~~~~~--~~~~ilR~~~v~G~~~~~---------~~~~~~~~~~~~~~~~~~~- 182 (287)
T 3sc6_A 125 ---------A-PINIYGASKYAGEQFVKELH--NKYFIVRTSWLYGKYGNN---------FVKTMIRLGKEREEISVVA- 182 (287)
T ss_dssp ---------C-CCSHHHHHHHHHHHHHHHHC--SSEEEEEECSEECSSSCC---------HHHHHHHHHTTCSEEEEEC-
T ss_pred ---------C-CCCHHHHHHHHHHHHHHHhC--CCcEEEeeeeecCCCCCc---------HHHHHHHHHHcCCCeEeec-
Confidence 1 33679999999999999874 578999999999975321 1223443344444334444
Q ss_pred CCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 470 HDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 470 ~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+..++||||+|+|++++.++... .+++||++++ .++++.||++.+.+.++
T Consensus 183 -~~~~~~i~v~Dva~~~~~~~~~~--------------------~~~~~~i~~~--~~~s~~e~~~~i~~~~g 232 (287)
T 3sc6_A 183 -DQIGSPTYVADLNVMINKLIHTS--------------------LYGTYHVSNT--GSCSWFEFAKKIFSYAN 232 (287)
T ss_dssp -SCEECCEEHHHHHHHHHHHHTSC--------------------CCEEEECCCB--SCEEHHHHHHHHHHHHT
T ss_pred -CcccCceEHHHHHHHHHHHHhCC--------------------CCCeEEEcCC--CcccHHHHHHHHHHHcC
Confidence 47899999999999999998653 2569999999 88999999999999988
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=99.88 E-value=1.5e-21 Score=199.37 Aligned_cols=192 Identities=19% Similarity=0.126 Sum_probs=144.1
Q ss_pred EEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 282 ISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 282 v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
+.||++++ +.+..++.+ +|+||||||..... ..+..++.+|+.||.+|+++|.. .++ +|||+||.+|
T Consensus 36 ~~~D~~d~------~~~~~~~~~~~~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~-~~~-~~v~~SS~~v 107 (299)
T 1n2s_A 36 FCGDFSNP------KGVAETVRKLRPDVIVNAAAHTAVDKAESEPELAQLLNATSVEAIAKAANE-TGA-WVVHYSTDYV 107 (299)
T ss_dssp SCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTCHHHHHHHHTHHHHHHHHHHTT-TTC-EEEEEEEGGG
T ss_pred ccccCCCH------HHHHHHHHhcCCCEEEECcccCCHhhhhcCHHHHHHHHHHHHHHHHHHHHH-cCC-cEEEEecccE
Confidence 45777753 457788876 99999999987643 45667899999999999999998 456 8999999999
Q ss_pred ccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccc
Q psy5825 357 HSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVV 434 (596)
Q Consensus 357 ~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~ 434 (596)
||... .+.|+..+ . ..+.|+.+|+.+|++++.+. .+++|+||++||
T Consensus 108 y~~~~~~~~~E~~~~-----------------------------~-p~~~Y~~sK~~~E~~~~~~~--~~~~ilRp~~v~ 155 (299)
T 1n2s_A 108 FPGTGDIPWQETDAT-----------------------------S-PLNVYGKTKLAGEKALQDNC--PKHLIFRTSWVY 155 (299)
T ss_dssp SCCCTTCCBCTTSCC-----------------------------C-CSSHHHHHHHHHHHHHHHHC--SSEEEEEECSEE
T ss_pred EeCCCCCCCCCCCCC-----------------------------C-CccHHHHHHHHHHHHHHHhC--CCeEEEeeeeec
Confidence 98643 23332100 1 33689999999999998874 499999999999
Q ss_pred cCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCC-
Q psy5825 435 STWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRT- 513 (596)
Q Consensus 435 G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~- 513 (596)
|+... .....++..+..|....+++ +..++|+||+|+|++++.++...... .
T Consensus 156 G~~~~---------~~~~~~~~~~~~~~~~~~~~--~~~~~~i~v~Dva~~~~~~~~~~~~~----------------~~ 208 (299)
T 1n2s_A 156 AGKGN---------NFAKTMLRLAKERQTLSVIN--DQYGAPTGAELLADCTAHAIRVALNK----------------PE 208 (299)
T ss_dssp CSSSC---------CHHHHHHHHHHHCSEEEEEC--SCEECCEEHHHHHHHHHHHHHHHHHC----------------GG
T ss_pred CCCcC---------cHHHHHHHHHhcCCCEEeec--CcccCCeeHHHHHHHHHHHHHHhccc----------------cc
Confidence 97531 11223444444554333444 47899999999999999998765210 1
Q ss_pred CCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 514 DPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 514 ~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++|+.||++.+.+.++
T Consensus 209 ~~~~~~i~~~--~~~s~~e~~~~i~~~~g 235 (299)
T 1n2s_A 209 VAGLYHLVAG--GTTTWHDYAALVFDEAR 235 (299)
T ss_dssp GCEEEECCCB--SCEEHHHHHHHHHHHHH
T ss_pred cCceEEEeCC--CCCCHHHHHHHHHHHhC
Confidence 2679999998 89999999999999887
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=203.27 Aligned_cols=201 Identities=13% Similarity=0.034 Sum_probs=151.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCC-ceEEE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQL-KAILH 350 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~v-krfV~ 350 (596)
.++.++.||++++ +.+..++++ +|+||||||..... ..+..++.+|+.||.+|+++|..+ ++ .+|||
T Consensus 52 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~Nv~g~~~l~~a~~~~-~~~~~iv~ 124 (345)
T 2z1m_A 52 NDVKIIHMDLLEF------SNIIRTIEKVQPDEVYNLAAQSFVGVSFEQPILTAEVDAIGVLRILEALRTV-KPDTKFYQ 124 (345)
T ss_dssp TTEEECCCCTTCH------HHHHHHHHHHCCSEEEECCCCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHH-CTTCEEEE
T ss_pred CceeEEECCCCCH------HHHHHHHHhcCCCEEEECCCCcchhhhhhCHHHHHHHHHHHHHHHHHHHHHh-CCCceEEE
Confidence 4689999999864 457778776 59999999987643 346678999999999999999984 55 89999
Q ss_pred ecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEE
Q psy5825 351 VSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLA 426 (596)
Q Consensus 351 vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~ 426 (596)
+||++|||... .+.|+. + .. ..+.|+.||+++|.+++.++ .+++++
T Consensus 125 ~SS~~vyg~~~~~~~~e~~--------------------------~---~~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ 174 (345)
T 2z1m_A 125 ASTSEMFGKVQEIPQTEKT--------------------------P---FY-PRSPYAVAKLFGHWITVNYREAYNMFAC 174 (345)
T ss_dssp EEEGGGGCSCSSSSBCTTS--------------------------C---CC-CCSHHHHHHHHHHHHHHHHHHHHCCCEE
T ss_pred EechhhcCCCCCCCCCccC--------------------------C---CC-CCChhHHHHHHHHHHHHHHHHHhCCceE
Confidence 99999998643 222211 0 01 23679999999999999887 689999
Q ss_pred EecCCccccCCCCCccccCCCCC--CcHHHHHHHHhccc-eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCC
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNNLY--GPGGAAAGAALGLI-HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPP 503 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~~~--~~~~l~~~~~~g~~-~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~ 503 (596)
++|++++||+.. ..+.. ....++..+..|.. ..+++++...++|+||+|+|++++.++...
T Consensus 175 ~~r~~~~~gpg~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~a~~~~~~~~---------- 238 (345)
T 2z1m_A 175 SGILFNHESPLR------GIEFVTRKITYSLARIKYGLQDKLVLGNLNAKRDWGYAPEYVEAMWLMMQQP---------- 238 (345)
T ss_dssp EEEECCEECTTS------CTTSHHHHHHHHHHHHHTTSCSCEEESCTTCEECCEEHHHHHHHHHHHHTSS----------
T ss_pred eeeeeeecCCCC------CCcchhHHHHHHHHHHHcCCCCeeeeCCCCceeeeEEHHHHHHHHHHHHhCC----------
Confidence 999999999743 22111 01122223334432 335677788899999999999999988542
Q ss_pred CCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 504 ASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 504 ~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++++.||++.+.+.++
T Consensus 239 ----------~~~~~~i~~~--~~~s~~e~~~~i~~~~g 265 (345)
T 2z1m_A 239 ----------EPDDYVIATG--ETHTVREFVEKAAKIAG 265 (345)
T ss_dssp ----------SCCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred ----------CCceEEEeCC--CCccHHHHHHHHHHHhC
Confidence 2469999998 89999999999999887
|
| >1z7e_A Protein aRNA; rossmann fold, OB-like fold, hydrolase; HET: ATP UGA; 3.00A {Escherichia coli} SCOP: b.46.1.1 c.2.1.2 c.65.1.1 | Back alignment and structure |
|---|
Probab=99.87 E-value=1.4e-21 Score=222.16 Aligned_cols=256 Identities=13% Similarity=0.088 Sum_probs=177.8
Q ss_pred EEEEeCCCCcccHHHHHHHHhhh---hhH--HHhhhhhhhh-hcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcC
Q psy5825 239 IYILLRSKKNKTVQERLAEQFKD---ELF--DRLKNEQADI-LQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAA 312 (596)
Q Consensus 239 V~~LvR~~~~~~~~~Rl~~~~~~---~~~--~~l~~~~~~~-~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~A 312 (596)
-.+||.+.+|.-+..-+..++.. .++ ++-....... ...++.++.||++++. ..+..+++++|+|||||
T Consensus 316 ~~VLVTGatG~IG~~l~~~Ll~~~g~~V~~~~r~~~~~~~~~~~~~v~~v~~Dl~d~~-----~~~~~~~~~~D~Vih~A 390 (660)
T 1z7e_A 316 TRVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHS-----EWIEYHVKKCDVVLPLV 390 (660)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSSSEEEEEEESCCTTTGGGTTCTTEEEEECCTTTCH-----HHHHHHHHHCSEEEECC
T ss_pred ceEEEEcCCcHHHHHHHHHHHhcCCCEEEEEEcCchhhhhhccCCceEEEECCCCCcH-----HHHHHhhcCCCEEEECc
Confidence 35788888777777666666643 111 1100000111 1257999999999752 23667788999999999
Q ss_pred ccCCh---hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChH
Q psy5825 313 ASLRF---DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQE 387 (596)
Q Consensus 313 A~v~~---~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~ 387 (596)
|.... ..++..++.+|+.||.+|+++|.. .+ ++|||+||++|||... .+.|+.....
T Consensus 391 a~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~-~~-~r~V~~SS~~vyg~~~~~~~~E~~~~~~---------------- 452 (660)
T 1z7e_A 391 AIATPIEYTRNPLRVFELDFEENLRIIRYCVK-YR-KRIIFPSTSEVYGMCSDKYFDEDHSNLI---------------- 452 (660)
T ss_dssp CCCCTHHHHHSHHHHHHHHTHHHHHHHHHHHH-TT-CEEEEECCGGGGBTCCSSSBCTTTCCEE----------------
T ss_pred eecCccccccCHHHHHHhhhHHHHHHHHHHHH-hC-CEEEEEecHHHcCCCCCcccCCCccccc----------------
Confidence 98763 345667899999999999999998 45 8999999999998643 2333211000
Q ss_pred HHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCC-CCCcHHHHHHHHhccce
Q psy5825 388 ELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNN-LYGPGGAAAGAALGLIH 464 (596)
Q Consensus 388 ~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~-~~~~~~l~~~~~~g~~~ 464 (596)
..| ... ..+.|+.||+++|++++.++ .|++++|+||++|||+...+..++..+ ......++..+..|...
T Consensus 453 ----~~p--~~~-p~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRpg~v~Gp~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 525 (660)
T 1z7e_A 453 ----VGP--VNK-PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFRPFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPI 525 (660)
T ss_dssp ----ECC--TTC-TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEEECSEESTTSSCHHHHTTTCSCHHHHHHHHHHHTCCE
T ss_pred ----cCc--ccC-CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECCCcccCCCccccccccccccchHHHHHHHHHcCCCc
Confidence 000 001 23579999999999999876 799999999999999875431110000 11123455556666655
Q ss_pred EeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCC-cccHHHHHHHHHHHcc
Q psy5825 465 TFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSY-PITWLEYMNSVQAAGK 542 (596)
Q Consensus 465 ~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~-~vt~~el~~~l~~~~~ 542 (596)
.+++++...++|+||+|||++++.++...... ..+++||++++ . ++++.||++.+.+.++
T Consensus 526 ~~~g~g~~~~~~i~v~Dva~ai~~~l~~~~~~----------------~~g~~~ni~~~--~~~~s~~el~~~i~~~~g 586 (660)
T 1z7e_A 526 KLIDGGKQKRCFTDIRDGIEALYRIIENAGNR----------------CDGEIINIGNP--ENEASIEELGEMLLASFE 586 (660)
T ss_dssp EEEGGGCCEEECEEHHHHHHHHHHHHHCGGGT----------------TTTEEEEECCG--GGEEEHHHHHHHHHHHHH
T ss_pred EEeCCCCeEEEEEEHHHHHHHHHHHHhCcccc----------------CCCeEEEECCC--CCCcCHHHHHHHHHHHhc
Confidence 56777888999999999999999998754310 14789999987 6 7999999999998876
|
| >1z45_A GAL10 bifunctional protein; epimerase, mutarotase, metabolism, isomerase; HET: GAL NAD GUD; 1.85A {Saccharomyces cerevisiae} SCOP: b.30.5.4 c.2.1.2 | Back alignment and structure |
|---|
Probab=99.87 E-value=2.6e-21 Score=221.27 Aligned_cols=215 Identities=16% Similarity=0.092 Sum_probs=153.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.|||+++ +.+..++. ++|+||||||..... .....++.+|+.||.+|+++|.. .++++|||+
T Consensus 61 ~~v~~v~~Dl~d~------~~l~~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~-~~~~~iV~~ 133 (699)
T 1z45_A 61 HHIPFYEVDLCDR------KGLEKVFKEYKIDSVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQ-YNVSKFVFS 133 (699)
T ss_dssp SCCCEEECCTTCH------HHHHHHHHHSCCCEEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEE
T ss_pred CceEEEEcCCCCH------HHHHHHHHhCCCCEEEECCcccCcCccccCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEE
Confidence 5788999999965 35777777 799999999987643 23456889999999999999988 478999999
Q ss_pred cCcccccCCc------cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----c
Q psy5825 352 STLYTHSYRE------DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----Y 421 (596)
Q Consensus 352 SS~~v~g~~~------~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----~ 421 (596)
||++|||... .+.|+. + .. ..+.|+.||+++|++++.++ .
T Consensus 134 SS~~vyg~~~~~~~~~~~~E~~--------------------------~---~~-p~~~Y~~sK~~~E~~~~~~~~~~~~ 183 (699)
T 1z45_A 134 SSATVYGDATRFPNMIPIPEEC--------------------------P---LG-PTNPYGHTKYAIENILNDLYNSDKK 183 (699)
T ss_dssp EEGGGGCCGGGSTTCCSBCTTS--------------------------C---CC-CCSHHHHHHHHHHHHHHHHHHHSTT
T ss_pred CcHHHhCCCccccccCCccccC--------------------------C---CC-CCChHHHHHHHHHHHHHHHHHhccC
Confidence 9999998532 111110 0 01 23689999999999999875 4
Q ss_pred CCCEEEecCCccccCCCCCccccCCC--CCCcHHHHHHHHhcc--ceEeec------CCCCccccccHHHHHHHHHHHHH
Q psy5825 422 KLPLAMVRPSIVVSTWKEPIVGWSNN--LYGPGGAAAGAALGL--IHTFYA------KHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 422 gl~~~IlRp~~V~G~~~~p~~G~~~~--~~~~~~l~~~~~~g~--~~~~~~------~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+++++|+||++|||+...++.|.... ......++..+..+. ...+++ ++...++||||+|||++++.++.
T Consensus 184 g~~~~ilR~~~vyG~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~i~v~Dva~a~~~a~~ 263 (699)
T 1z45_A 184 SWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQVAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQ 263 (699)
T ss_dssp SCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHH
T ss_pred CCcEEEEEeccccCCCcccccccccccchhHHHHHHHHHHhcCCCceEEeCCcccCCCCCeeEeeEEHHHHHHHHHHHHh
Confidence 89999999999999865332221100 112234444444331 122334 56788999999999999999887
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
...... .....+++|||+++ .++++.+|++.|.+.++
T Consensus 264 ~~~~~~------------~~~~~~~~yni~~~--~~~s~~el~~~i~~~~g 300 (699)
T 1z45_A 264 YLEAYN------------ENEGLCREWNLGSG--KGSTVFEVYHAFCKASG 300 (699)
T ss_dssp HHHHSC------------TTCCEEEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred hhhccc------------cccCCceEEEECCC--CCCcHHHHHHHHHHHhC
Confidence 532100 00013579999999 88999999999999887
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=99.87 E-value=2.5e-21 Score=201.16 Aligned_cols=218 Identities=13% Similarity=0.071 Sum_probs=151.9
Q ss_pred CcEEEE-EeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 277 RKVHII-SGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 277 ~rv~~v-~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
.++.++ .+|++++.. +..+++++|+||||||...+..++..++.+|+.||.+|+++|....++++|||+||.+
T Consensus 61 ~~~~~~~~~D~~d~~~------~~~~~~~~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~ 134 (342)
T 1y1p_A 61 GRFETAVVEDMLKQGA------YDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134 (342)
T ss_dssp TTEEEEECSCTTSTTT------TTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred CceEEEEecCCcChHH------HHHHHcCCCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence 478888 899998764 6677789999999999887666677799999999999999998535789999999999
Q ss_pred cccCC------ccccccccCCCCChHHHHHHHhcCChHHH-Hhhhhhhc-CCCCCchHHHHHHHHHHHHHHHh----cCC
Q psy5825 356 THSYR------EDIQEEFYPPLFSYEDLAHVMQTTNQEEL-EILSSMLF-GGIYNNSYSFTKAIGESVVEKYL----YKL 423 (596)
Q Consensus 356 v~g~~------~~i~E~~~~~~~~~~~~~~~~~~~~e~~~-~~~~p~~~-~~~~~~~Y~~SK~~aE~lv~~~~----~gl 423 (596)
+|+.. ..++|+.+. +... ....+... .....+.|+.||+++|++++.++ .++
T Consensus 135 ~~~~~~~~~~~~~~~E~~~~----------------~~~~~~~~~~~~~~~~~~~~~Y~~sK~~~e~~~~~~~~~~~~~~ 198 (342)
T 1y1p_A 135 SALIPKPNVEGIYLDEKSWN----------------LESIDKAKTLPESDPQKSLWVYAASKTEAELAAWKFMDENKPHF 198 (342)
T ss_dssp GTCCCCTTCCCCEECTTCCC----------------HHHHHHHHHSCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSS
T ss_pred HhcCCCCCCCCcccCccccC----------------chhhhhhccccccccccchHHHHHHHHHHHHHHHHHHHhcCCCc
Confidence 98642 123332211 0000 00000000 00012579999999999999886 278
Q ss_pred CEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCC
Q psy5825 424 PLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPP 503 (596)
Q Consensus 424 ~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~ 503 (596)
+++|+||++|||+...+... . .....++..+..|....+++++ ..++|+||+|||++++.++....
T Consensus 199 ~~~~~rp~~v~g~~~~~~~~---~-~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~v~Dva~a~~~~~~~~~--------- 264 (342)
T 1y1p_A 199 TLNAVLPNYTIGTIFDPETQ---S-GSTSGWMMSLFNGEVSPALALM-PPQYYVSAVDIGLLHLGCLVLPQ--------- 264 (342)
T ss_dssp EEEEEEESEEECCCSCTTTC---C-CHHHHHHHHHHTTCCCHHHHTC-CSEEEEEHHHHHHHHHHHHHCTT---------
T ss_pred eEEEEcCCceECCCCCCCCC---C-ccHHHHHHHHHcCCCccccccC-CcCCEeEHHHHHHHHHHHHcCcc---------
Confidence 99999999999986543210 0 1223455555555443334444 67899999999999999886532
Q ss_pred CCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 504 ASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 504 ~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+..|. +++ .++++.||++.+.+.++
T Consensus 265 ---------~~g~~~~-~~g--~~~s~~e~~~~i~~~~~ 291 (342)
T 1y1p_A 265 ---------IERRRVY-GTA--GTFDWNTVLATFRKLYP 291 (342)
T ss_dssp ---------CCSCEEE-ECC--EEECHHHHHHHHHHHCT
T ss_pred ---------cCCceEE-EeC--CCCCHHHHHHHHHHHCC
Confidence 1344443 445 57999999999999887
|
| >2hrz_A AGR_C_4963P, nucleoside-diphosphate-sugar epimerase; agrobacterium tumefa structural genomics, PSI-2, protein structure initiative; 1.85A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.87 E-value=3.4e-21 Score=200.73 Aligned_cols=245 Identities=14% Similarity=0.065 Sum_probs=169.2
Q ss_pred EEEEeCCCCcccHHHHHHHHhhhhh------HHHh---hhhh--hhhhcCcEEEEEeccCCCCCCCCHHHHHHHh-cccc
Q psy5825 239 IYILLRSKKNKTVQERLAEQFKDEL------FDRL---KNEQ--ADILQRKVHIISGDISQPSLGISSHDQQFIQ-HHIH 306 (596)
Q Consensus 239 V~~LvR~~~~~~~~~Rl~~~~~~~~------~~~l---~~~~--~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~-~~vd 306 (596)
..+||.+.+|.-+..-+..++..+. +..+ +... ......++.++.+||+++.. +..++ .++|
T Consensus 15 ~~vlVtGa~G~iG~~l~~~L~~~g~~~~r~~~~V~~~~r~~~~~~~~~~~~~~~~~~Dl~d~~~------~~~~~~~~~d 88 (342)
T 2hrz_A 15 MHIAIIGAAGMVGRKLTQRLVKDGSLGGKPVEKFTLIDVFQPEAPAGFSGAVDARAADLSAPGE------AEKLVEARPD 88 (342)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHHCEETTEEEEEEEEEESSCCCCCTTCCSEEEEEECCTTSTTH------HHHHHHTCCS
T ss_pred CEEEEECCCcHHHHHHHHHHHhcCCcccCCCceEEEEEccCCccccccCCceeEEEcCCCCHHH------HHHHHhcCCC
Confidence 4578888777777666666554320 1100 0000 00011468899999998753 77777 4899
Q ss_pred EEEEcCccCCh--hhhHHHHHHHHHHHHHHHHHHHHhcC----CCceEEEecCcccccCCc--cccccccCCCCChHHHH
Q psy5825 307 VIIHAAASLRF--DELIQDAFTLNIQATRELLDLATRCS----QLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLA 378 (596)
Q Consensus 307 ~ViH~AA~v~~--~~~~~~~~~~NV~GT~~LL~~a~~~~----~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~ 378 (596)
+||||||.... ...+..++.+|+.||.+|+++|.... .+.+|||+||+++||... .++|+..+
T Consensus 89 ~vih~A~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~~~~~~~~~~iv~~SS~~~~~~~~~~~~~E~~~~--------- 159 (342)
T 2hrz_A 89 VIFHLAAIVSGEAELDFDKGYRINLDGTRYLFDAIRIANGKDGYKPRVVFTSSIAVFGAPLPYPIPDEFHT--------- 159 (342)
T ss_dssp EEEECCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCEEEEEEEGGGCCSSCCSSBCTTCCC---------
T ss_pred EEEECCccCcccccccHHHHHHHHHHHHHHHHHHHHhcccccCCCcEEEEeCchHhhCCCCCCCcCCCCCC---------
Confidence 99999998653 23456788999999999999998743 278999999999998632 23332110
Q ss_pred HHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCC--CcHHH
Q psy5825 379 HVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLY--GPGGA 454 (596)
Q Consensus 379 ~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~--~~~~l 454 (596)
. ..+.|+.||+++|++++.++ .+++++++|++.|||. ||+..... ....+
T Consensus 160 --------------------~-~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ir~~~v~g~-----pg~~~~~~~~~~~~~ 213 (342)
T 2hrz_A 160 --------------------T-PLTSYGTQKAICELLLSDYSRRGFFDGIGIRLPTICIR-----PGKPNAAASGFFSNI 213 (342)
T ss_dssp --------------------C-CSSHHHHHHHHHHHHHHHHHHTTSCEEEEEEECEETTC-----CSSCCCSGGGHHHHH
T ss_pred --------------------C-CcchHHHHHHHHHHHHHHHHHhcCCCceeEEeeeEEec-----CCCCcchhHHHHHHH
Confidence 0 23679999999999999887 5799999999999983 22221111 11233
Q ss_pred HHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHH
Q psy5825 455 AAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYM 534 (596)
Q Consensus 455 ~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~ 534 (596)
+..+..|....+++++....+|++|+|+|++++.++....... ..+++||++ + .++++.+|+
T Consensus 214 ~~~~~~~~~~~~~~~~~~~~~~~~v~Dva~~~~~~~~~~~~~~---------------~~~~~~ni~-g--~~~s~~e~~ 275 (342)
T 2hrz_A 214 LREPLVGQEAVLPVPESIRHWHASPRSAVGFLIHGAMIDVEKV---------------GPRRNLSMP-G--LSATVGEQI 275 (342)
T ss_dssp HHHHHTTCCEEECSCTTCEEEEECHHHHHHHHHHHHHSCHHHH---------------CSCCEEECC-C--EEEEHHHHH
T ss_pred HHHHhcCCCeeccCCCccceeeEehHHHHHHHHHHHhcccccc---------------CCccEEEcC-C--CCCCHHHHH
Confidence 4444555544456666777889999999999999886532100 136799996 4 579999999
Q ss_pred HHHHHHcc
Q psy5825 535 NSVQAAGK 542 (596)
Q Consensus 535 ~~l~~~~~ 542 (596)
+.|.+.++
T Consensus 276 ~~i~~~~g 283 (342)
T 2hrz_A 276 EALRKVAG 283 (342)
T ss_dssp HHHHHHHC
T ss_pred HHHHHHcC
Confidence 99999887
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=99.87 E-value=2.4e-21 Score=205.10 Aligned_cols=200 Identities=12% Similarity=0.022 Sum_probs=152.1
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCc-----e
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLK-----A 347 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vk-----r 347 (596)
++.++.|||+++ ..+..++.+ +|+||||||..... ..+..++.+|+.||.+|+++|... +++ +
T Consensus 84 ~~~~~~~Dl~d~------~~~~~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~~~~~~~~ 156 (381)
T 1n7h_A 84 LMKLHYADLTDA------SSLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSH-TIDSGRTVK 156 (381)
T ss_dssp CEEEEECCTTCH------HHHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHH-HHHHCCCCE
T ss_pred ceEEEECCCCCH------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHHh-CCccCCccE
Confidence 789999999864 457778776 59999999987753 345668899999999999999873 454 9
Q ss_pred EEEecCcccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 348 ILHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 348 fV~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
|||+||++|||... .+.|+. + .. ..+.|+.||+++|.+++.++ .+++
T Consensus 157 ~v~~SS~~vyg~~~~~~~E~~--------------------------~---~~-~~~~Y~~sK~~~E~~~~~~~~~~~~~ 206 (381)
T 1n7h_A 157 YYQAGSSEMFGSTPPPQSETT--------------------------P---FH-PRSPYAASKCAAHWYTVNYREAYGLF 206 (381)
T ss_dssp EEEEEEGGGGTTSCSSBCTTS--------------------------C---CC-CCSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred EEEeCcHHHhCCCCCCCCCCC--------------------------C---CC-CCCchHHHHHHHHHHHHHHHHHhCCc
Confidence 99999999998643 222211 0 00 23679999999999999887 6999
Q ss_pred EEEecCCccccCCCCCccccCCCCC--CcHHHHHHHHhcc-ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCC
Q psy5825 425 LAMVRPSIVVSTWKEPIVGWSNNLY--GPGGAAAGAALGL-IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVA 501 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~~G~~~~~~--~~~~l~~~~~~g~-~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~ 501 (596)
++++|++++||+... .++. ....++..+..|. ...+++++...++|+||+|||++++.++...
T Consensus 207 ~~~~r~~~~~gp~~~------~~~~~~~~~~~~~~~~~g~~~~~~~g~~~~~~~~v~v~Dva~a~~~~~~~~-------- 272 (381)
T 1n7h_A 207 ACNGILFNHESPRRG------ENFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE-------- 272 (381)
T ss_dssp EEEEEECCEECTTSC------TTSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS--------
T ss_pred EEEEEeCceeCCCCC------CcchhHHHHHHHHHHHcCCCCeEEeCCCCceeeeEEHHHHHHHHHHHHhCC--------
Confidence 999999999997532 1111 0122333344453 2334677888999999999999999988542
Q ss_pred CCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 502 PPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 502 ~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .+++|.||++.|.+.++
T Consensus 273 ------------~~~~~~i~~~--~~~s~~e~~~~i~~~~g 299 (381)
T 1n7h_A 273 ------------KPDDYVVATE--EGHTVEEFLDVSFGYLG 299 (381)
T ss_dssp ------------SCCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred ------------CCCeEEeeCC--CCCcHHHHHHHHHHHcC
Confidence 2479999998 89999999999999887
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=99.86 E-value=7.4e-21 Score=195.86 Aligned_cols=231 Identities=19% Similarity=0.088 Sum_probs=138.8
Q ss_pred EEeCCCCcccHHHHHHHHhhhh--hHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCC
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDE--LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLR 316 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~--~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~ 316 (596)
+||.+.+|.-+..-+..++..+ +.-..+. ... .+ ++.||++++.. +..++.+ +|+||||||...
T Consensus 5 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~--~~~--~~--~~~~Dl~d~~~------~~~~~~~~~~d~vih~A~~~~ 72 (315)
T 2ydy_A 5 VLVTGATGLLGRAVHKEFQQNNWHAVGCGFR--RAR--PK--FEQVNLLDSNA------VHHIIHDFQPHVIVHCAAERR 72 (315)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCEEEEEC------------------------------CHHHHHHHCCSEEEECC----
T ss_pred EEEECCCcHHHHHHHHHHHhCCCeEEEEccC--CCC--CC--eEEecCCCHHH------HHHHHHhhCCCEEEECCcccC
Confidence 5666666666665555555421 1100000 000 12 66789987653 6666665 899999999865
Q ss_pred hh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhh
Q psy5825 317 FD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEIL 392 (596)
Q Consensus 317 ~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~ 392 (596)
.. .++..++.+|+.||.+|+++|... ++ +|||+||.+||+... .+.|+..+
T Consensus 73 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~-~~-~~v~~SS~~v~~~~~~~~~E~~~~----------------------- 127 (315)
T 2ydy_A 73 PDVVENQPDAASQLNVDASGNLAKEAAAV-GA-FLIYISSDYVFDGTNPPYREEDIP----------------------- 127 (315)
T ss_dssp ---------------CHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSSSCSBCTTSCC-----------------------
T ss_pred hhhhhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEEchHHHcCCCCCCCCCCCCC-----------------------
Confidence 43 345568899999999999999984 55 999999999998622 23332110
Q ss_pred hhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHH-hccceEeecCCC
Q psy5825 393 SSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAA-LGLIHTFYAKHD 471 (596)
Q Consensus 393 ~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~-~g~~~~~~~~~~ 471 (596)
. ..+.|+.||+.+|++++.+ +++++|+||++|||+...+..++ ...++..+. .|....+. ++
T Consensus 128 ------~-~~~~Y~~sK~~~e~~~~~~--~~~~~~lR~~~v~G~~~~~~~~~------~~~~~~~~~~~~~~~~~~--~~ 190 (315)
T 2ydy_A 128 ------A-PLNLYGKTKLDGEKAVLEN--NLGAAVLRIPILYGEVEKLEESA------VTVMFDKVQFSNKSANMD--HW 190 (315)
T ss_dssp ------C-CCSHHHHHHHHHHHHHHHH--CTTCEEEEECSEECSCSSGGGST------TGGGHHHHHCCSSCEEEE--CS
T ss_pred ------C-CcCHHHHHHHHHHHHHHHh--CCCeEEEeeeeeeCCCCcccccH------HHHHHHHHHhcCCCeeec--cC
Confidence 0 2367999999999999887 57889999999999865421111 122333333 44432333 46
Q ss_pred CccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 472 KKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 472 ~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
...+|+||+|||++++.++....... ..+++||++++ .++++.+|++.+.+.++
T Consensus 191 ~~~~~i~v~Dva~a~~~~~~~~~~~~---------------~~~~~~~i~~~--~~~s~~e~~~~i~~~~g 244 (315)
T 2ydy_A 191 QQRFPTHVKDVATVCRQLAEKRMLDP---------------SIKGTFHWSGN--EQMTKYEMACAIADAFN 244 (315)
T ss_dssp SBBCCEEHHHHHHHHHHHHHHHHTCT---------------TCCEEEECCCS--CCBCHHHHHHHHHHHTT
T ss_pred ceECcEEHHHHHHHHHHHHHhhcccc---------------CCCCeEEEcCC--CcccHHHHHHHHHHHhC
Confidence 78899999999999999887541100 24779999998 89999999999999887
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.86 E-value=2.8e-20 Score=189.43 Aligned_cols=217 Identities=16% Similarity=0.093 Sum_probs=157.5
Q ss_pred eEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEE---EeccCCCCCCCCHHHHHHHhc--cccEEEEcC
Q psy5825 238 GIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHII---SGDISQPSLGISSHDQQFIQH--HIHVIIHAA 312 (596)
Q Consensus 238 ~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v---~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~A 312 (596)
.-.+||.+.+|.-+..-+..++..+ .+|.++ .+|+++ .+.+..++. ++|+|||||
T Consensus 12 ~~~vlVtGatG~iG~~l~~~L~~~g--------------~~V~~~~r~~~Dl~d------~~~~~~~~~~~~~d~vih~A 71 (292)
T 1vl0_A 12 HMKILITGANGQLGREIQKQLKGKN--------------VEVIPTDVQDLDITN------VLAVNKFFNEKKPNVVINCA 71 (292)
T ss_dssp CEEEEEESTTSHHHHHHHHHHTTSS--------------EEEEEECTTTCCTTC------HHHHHHHHHHHCCSEEEECC
T ss_pred cceEEEECCCChHHHHHHHHHHhCC--------------CeEEeccCccCCCCC------HHHHHHHHHhcCCCEEEECC
Confidence 3456788877777766555554321 123333 356654 345777777 799999999
Q ss_pred ccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChH
Q psy5825 313 ASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQE 387 (596)
Q Consensus 313 A~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~ 387 (596)
|..... ..+..++.+|+.||.+|+++|... ++ +|||+||++||+... .+.|+..+
T Consensus 72 ~~~~~~~~~~~~~~~~~~nv~~~~~l~~a~~~~-~~-~iv~~SS~~v~~~~~~~~~~E~~~~------------------ 131 (292)
T 1vl0_A 72 AHTAVDKCEEQYDLAYKINAIGPKNLAAAAYSV-GA-EIVQISTDYVFDGEAKEPITEFDEV------------------ 131 (292)
T ss_dssp CCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHH-TC-EEEEEEEGGGSCSCCSSCBCTTSCC------------------
T ss_pred ccCCHHHHhcCHHHHHHHHHHHHHHHHHHHHHc-CC-eEEEechHHeECCCCCCCCCCCCCC------------------
Confidence 987643 345678999999999999999984 56 999999999998643 23332110
Q ss_pred HHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEee
Q psy5825 388 ELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFY 467 (596)
Q Consensus 388 ~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~ 467 (596)
. ..+.|+.||+.+|.+++.+ +.+++|+||++|||+ .. + ....++..+..|....++
T Consensus 132 -----------~-~~~~Y~~sK~~~E~~~~~~--~~~~~~lR~~~v~G~-~~---~------~~~~~~~~~~~~~~~~~~ 187 (292)
T 1vl0_A 132 -----------N-PQSAYGKTKLEGENFVKAL--NPKYYIVRTAWLYGD-GN---N------FVKTMINLGKTHDELKVV 187 (292)
T ss_dssp -----------C-CCSHHHHHHHHHHHHHHHH--CSSEEEEEECSEESS-SS---C------HHHHHHHHHHHCSEEEEE
T ss_pred -----------C-CccHHHHHHHHHHHHHHhh--CCCeEEEeeeeeeCC-Cc---C------hHHHHHHHHhcCCcEEee
Confidence 0 2367999999999999887 457999999999997 21 1 122334444445433344
Q ss_pred cCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 468 AKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 468 ~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+ +...+|++|+|+|++++.++... .+++||++++ .++++.+|++.+.+.++
T Consensus 188 ~--~~~~~~i~v~Dva~~~~~~~~~~--------------------~~~~~~i~~~--~~~s~~e~~~~i~~~~g 238 (292)
T 1vl0_A 188 H--DQVGTPTSTVDLARVVLKVIDEK--------------------NYGTFHCTCK--GICSWYDFAVEIFRLTG 238 (292)
T ss_dssp S--SCEECCEEHHHHHHHHHHHHHHT--------------------CCEEEECCCB--SCEEHHHHHHHHHHHHC
T ss_pred c--CeeeCCccHHHHHHHHHHHHhcC--------------------CCcEEEecCC--CCccHHHHHHHHHHHhC
Confidence 4 47889999999999999988653 2579999998 88999999999999887
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=1.3e-20 Score=197.13 Aligned_cols=183 Identities=13% Similarity=0.104 Sum_probs=143.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.||++++ +.+..+++++|+|||+||..... .....++.+|+.||.+|+++|.. .++++|||+||
T Consensus 70 ~~v~~~~~Dl~d~------~~l~~~~~~~D~Vih~Aa~~~~~~~~~~~~~~~~~Nv~gt~~l~~aa~~-~~v~~~V~~SS 142 (344)
T 2gn4_A 70 PRMRFFIGDVRDL------ERLNYALEGVDICIHAAALKHVPIAEYNPLECIKTNIMGASNVINACLK-NAISQVIALST 142 (344)
T ss_dssp TTEEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEECC
T ss_pred CCEEEEECCCCCH------HHHHHHHhcCCEEEECCCCCCCCchhcCHHHHHHHHHHHHHHHHHHHHh-CCCCEEEEecC
Confidence 5799999999964 45888899999999999987632 23456899999999999999998 57999999999
Q ss_pred cccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEe
Q psy5825 354 LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMV 428 (596)
Q Consensus 354 ~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~Il 428 (596)
..++. ..+.|+.||+++|.++..+. .|++++++
T Consensus 143 ~~~~~------------------------------------------p~~~Y~~sK~~~E~~~~~~~~~~~~~g~~~~~v 180 (344)
T 2gn4_A 143 DKAAN------------------------------------------PINLYGATKLCSDKLFVSANNFKGSSQTQFSVV 180 (344)
T ss_dssp GGGSS------------------------------------------CCSHHHHHHHHHHHHHHHGGGCCCSSCCEEEEE
T ss_pred CccCC------------------------------------------CccHHHHHHHHHHHHHHHHHHHhCCCCcEEEEE
Confidence 76542 12569999999999999876 47999999
Q ss_pred cCCccccCCCCCccccCCCCCCcHHHHHHHHhcc-ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcC
Q psy5825 429 RPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGL-IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLV 507 (596)
Q Consensus 429 Rp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~ 507 (596)
|||+|||+.. .....++..+..|. ...+ .++...++|++|+|+|++++.++...
T Consensus 181 Rpg~v~g~~~----------~~i~~~~~~~~~g~~~~~i-~~~~~~r~~i~v~D~a~~v~~~l~~~-------------- 235 (344)
T 2gn4_A 181 RYGNVVGSRG----------SVVPFFKKLVQNKASEIPI-TDIRMTRFWITLDEGVSFVLKSLKRM-------------- 235 (344)
T ss_dssp CCCEETTCTT----------SHHHHHHHHHHHTCCCEEE-SCTTCEEEEECHHHHHHHHHHHHHHC--------------
T ss_pred EeccEECCCC----------CHHHHHHHHHHcCCCceEE-eCCCeEEeeEEHHHHHHHHHHHHhhc--------------
Confidence 9999999742 11123333444554 2223 35677889999999999999998653
Q ss_pred CCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHc
Q psy5825 508 APIPRTDPPVYNLSISSSYPITWLEYMNSVQAAG 541 (596)
Q Consensus 508 ~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~ 541 (596)
..+++||++++ .+++.+|++.+...+
T Consensus 236 -----~~g~~~~~~~~---~~s~~el~~~i~~~~ 261 (344)
T 2gn4_A 236 -----HGGEIFVPKIP---SMKMTDLAKALAPNT 261 (344)
T ss_dssp -----CSSCEEEECCC---EEEHHHHHHHHCTTC
T ss_pred -----cCCCEEecCCC---cEEHHHHHHHHHHhC
Confidence 24779998775 599999999998654
|
| >2v6g_A Progesterone 5-beta-reductase; tyrosine-dependent oxidoreductase, oxidoreductase, SDR, cardenolides, cardiac glycosides; HET: NAP; 2.3A {Digitalis lanata} PDB: 2v6f_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=3e-21 Score=202.69 Aligned_cols=199 Identities=17% Similarity=0.151 Sum_probs=146.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc---ccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhc-CCCceEE---
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH---IHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRC-SQLKAIL--- 349 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~---vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV--- 349 (596)
.++.++.||++++ +.+..++.+ +|+||||||... .+...++.+|+.||.+|+++|... .++++||
T Consensus 48 ~~~~~~~~Dl~d~------~~~~~~~~~~~~~d~vih~a~~~~--~~~~~~~~~n~~~~~~l~~a~~~~~~~~~~~v~~~ 119 (364)
T 2v6g_A 48 NPINYVQCDISDP------DDSQAKLSPLTDVTHVFYVTWANR--STEQENCEANSKMFRNVLDAVIPNCPNLKHISLQT 119 (364)
T ss_dssp SCCEEEECCTTSH------HHHHHHHTTCTTCCEEEECCCCCC--SSHHHHHHHHHHHHHHHHHHHTTTCTTCCEEEEEC
T ss_pred CceEEEEeecCCH------HHHHHHHhcCCCCCEEEECCCCCc--chHHHHHHHhHHHHHHHHHHHHHhccccceEEecc
Confidence 4788999999864 458888888 999999999874 356678999999999999999983 2689998
Q ss_pred ----EecCcccccCCc----cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 350 ----HVSTLYTHSYRE----DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 350 ----~vSS~~v~g~~~----~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
|+||++|||... .+.|+... .. ..+.| +.+|++++.++
T Consensus 120 g~~i~~Ss~~vyg~~~~~~~~~~E~~~~----------------------------~~-~~~~y----~~~E~~~~~~~~ 166 (364)
T 2v6g_A 120 GRKHYMGPFESYGKIESHDPPYTEDLPR----------------------------LK-YMNFY----YDLEDIMLEEVE 166 (364)
T ss_dssp CTHHHHCCGGGTTTSCCCCSSBCTTSCC----------------------------CS-SCCHH----HHHHHHHHHHHT
T ss_pred CceEEEechhhccccccCCCCCCccccC----------------------------Cc-cchhh----HHHHHHHHHHhh
Confidence 899999998631 22232100 00 23568 56999999887
Q ss_pred -cC-CCEEEecCCccccCCCCCccccCCCCCCcHH--HHHHH--HhccceEeecCC---CCccccccHHHHHHHHHHHHH
Q psy5825 421 -YK-LPLAMVRPSIVVSTWKEPIVGWSNNLYGPGG--AAAGA--ALGLIHTFYAKH---DKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 421 -~g-l~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~--l~~~~--~~g~~~~~~~~~---~~~~d~ipVDdva~aii~~~~ 491 (596)
.+ ++++|+||++|||+...+. ...... ++..+ ..|....+++++ ...+++++|+|+|++++.++.
T Consensus 167 ~~~~~~~~ilRp~~v~G~~~~~~------~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~v~Dva~a~~~~~~ 240 (364)
T 2v6g_A 167 KKEGLTWSVHRPGNIFGFSPYSM------MNLVGTLCVYAAICKHEGKVLRFTGCKAAWDGYSDCSDADLIAEHHIWAAV 240 (364)
T ss_dssp TSTTCEEEEEEESSEECCCTTCS------SCHHHHHHHHHHHHHHHTCCBCCCSCHHHHHSCBCCEEHHHHHHHHHHHHH
T ss_pred cCCCceEEEECCCceeCCCCCcc------cchHHHHHHHHHHHHhcCCceecCCCcccccccCCCCcHHHHHHHHHHHHh
Confidence 55 9999999999999865311 011111 22223 245443456655 455889999999999999987
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.... .+++||++++ .++|+.||++.+.+.++
T Consensus 241 ~~~~------------------~g~~~ni~~~--~~~s~~e~~~~i~~~~g 271 (364)
T 2v6g_A 241 DPYA------------------KNEAFNVSNG--DVFKWKHFWKVLAEQFG 271 (364)
T ss_dssp CGGG------------------TTEEEEECCS--CCBCHHHHHHHHHHHHT
T ss_pred CCCC------------------CCceEEecCC--CcCCHHHHHHHHHHHhC
Confidence 6432 4679999998 88999999999999887
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=99.86 E-value=2.3e-21 Score=201.44 Aligned_cols=226 Identities=14% Similarity=0.116 Sum_probs=160.5
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hH--HHhhhhhh---hhhcCcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEE
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LF--DRLKNEQA---DILQRKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIH 310 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~--~~l~~~~~---~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH 310 (596)
.+||.+.+|.-+..-+..++..+ ++ ++...... ..+ .++.++.|||+++ +.+..+++ ++|+|||
T Consensus 22 ~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l-~~v~~~~~Dl~d~------~~~~~~~~~~~~D~vih 94 (330)
T 2pzm_A 22 RILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPV-AGLSVIEGSVTDA------GLLERAFDSFKPTHVVH 94 (330)
T ss_dssp EEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSC-TTEEEEECCTTCH------HHHHHHHHHHCCSEEEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhcc-CCceEEEeeCCCH------HHHHHHHhhcCCCEEEE
Confidence 45666666666665555555431 11 11000000 111 4789999999964 45888888 8999999
Q ss_pred cCccCChh--hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc----cccccccCCCCChHHHHHHHhcC
Q psy5825 311 AAASLRFD--ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE----DIQEEFYPPLFSYEDLAHVMQTT 384 (596)
Q Consensus 311 ~AA~v~~~--~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~----~i~E~~~~~~~~~~~~~~~~~~~ 384 (596)
|||..... ..+. +.+|+.||.+|+++|.. .++++|||+||.++|+... .++|+.
T Consensus 95 ~A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~-~~~~~iV~~SS~~~~~~~~~~~~~~~E~~----------------- 154 (330)
T 2pzm_A 95 SAAAYKDPDDWAED--AATNVQGSINVAKAASK-AGVKRLLNFQTALCYGRPATVPIPIDSPT----------------- 154 (330)
T ss_dssp CCCCCSCTTCHHHH--HHHHTHHHHHHHHHHHH-HTCSEEEEEEEGGGGCSCSSSSBCTTCCC-----------------
T ss_pred CCccCCCccccChh--HHHHHHHHHHHHHHHHH-cCCCEEEEecCHHHhCCCccCCCCcCCCC-----------------
Confidence 99987642 2233 89999999999999998 4789999999999998532 122110
Q ss_pred ChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccce
Q psy5825 385 NQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIH 464 (596)
Q Consensus 385 ~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~ 464 (596)
. ..+.|+.||+++|++++.+ +++++++||++|||+... ......++..+..|.
T Consensus 155 --------------~-~~~~Y~~sK~~~e~~~~~~--~~~~~~iR~~~v~gp~~~--------~~~~~~~~~~~~~~~-- 207 (330)
T 2pzm_A 155 --------------A-PFTSYGISKTAGEAFLMMS--DVPVVSLRLANVTGPRLA--------IGPIPTFYKRLKAGQ-- 207 (330)
T ss_dssp --------------C-CCSHHHHHHHHHHHHHHTC--SSCEEEEEECEEECTTCC--------SSHHHHHHHHHHTTC--
T ss_pred --------------C-CCChHHHHHHHHHHHHHHc--CCCEEEEeeeeeECcCCC--------CCHHHHHHHHHHcCC--
Confidence 0 2367999999999999876 899999999999997420 011223344444444
Q ss_pred EeecCCCCccccccHHHHHH-HHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 465 TFYAKHDKKCDLIPVDVATN-MMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 465 ~~~~~~~~~~d~ipVDdva~-aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++++. ..+|++|+|+|+ +++.++... . +++||++++ .++++.+|++.+.+.++
T Consensus 208 ~~~~~~~-~~~~i~~~Dva~~a~~~~~~~~-------------------~-g~~~~v~~~--~~~s~~e~~~~i~~~~g 263 (330)
T 2pzm_A 208 KCFCSDT-VRDFLDMSDFLAIADLSLQEGR-------------------P-TGVFNVSTG--EGHSIKEVFDVVLDYVG 263 (330)
T ss_dssp CCCEESC-EECEEEHHHHHHHHHHHTSTTC-------------------C-CEEEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred EEeCCCC-EecceeHHHHHHHHHHHHhhcC-------------------C-CCEEEeCCC--CCCCHHHHHHHHHHHhC
Confidence 3445556 889999999999 998887531 3 679999998 88999999999999887
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.85 E-value=4.4e-21 Score=202.15 Aligned_cols=203 Identities=15% Similarity=0.056 Sum_probs=152.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCC---ceE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQL---KAI 348 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~v---krf 348 (596)
.++.++.||++++ +.+..++.+ +|+||||||..... .....++.+|+.||.+|+++|.. .++ .+|
T Consensus 55 ~~~~~~~~Dl~d~------~~~~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~~~i 127 (372)
T 1db3_A 55 PKFHLHYGDLSDT------SNLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRF-LGLEKKTRF 127 (372)
T ss_dssp CCEEECCCCSSCH------HHHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHH-TTCTTTCEE
T ss_pred CceEEEECCCCCH------HHHHHHHHhcCCCEEEECCcccCccccccCHHHHHHHHHHHHHHHHHHHHH-hCCCCCcEE
Confidence 5789999999964 457777776 69999999986543 34556889999999999999998 466 799
Q ss_pred EEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 349 LHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 349 V~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
||+||.++||... .+.|+... . ..+.|+.||+++|.+++.++ .+++
T Consensus 128 v~~SS~~v~g~~~~~~~~E~~~~-----------------------------~-~~~~Y~~sK~~~e~~~~~~~~~~~~~ 177 (372)
T 1db3_A 128 YQASTSELYGLVQEIPQKETTPF-----------------------------Y-PRSPYAVAKLYAYWITVNYRESYGMY 177 (372)
T ss_dssp EEEEEGGGGTTCCSSSBCTTSCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCC
T ss_pred EEeCChhhhCCCCCCCCCccCCC-----------------------------C-CCChHHHHHHHHHHHHHHHHHHhCCC
Confidence 9999999998643 22222100 0 23679999999999999887 6999
Q ss_pred EEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc-eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCC
Q psy5825 425 LAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI-HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPP 503 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~-~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~ 503 (596)
++++|++++||+...+ ++.. .....++..+..|.. ..++++++..++||||+|||++++.++...
T Consensus 178 ~~~~r~~~~~gp~~~~--~~~~--~~~~~~~~~~~~g~~~~~~~g~~~~~~~~i~v~Dva~a~~~~~~~~---------- 243 (372)
T 1db3_A 178 ACNGILFNHESPRRGE--TFVT--RKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQE---------- 243 (372)
T ss_dssp EEEEEECCEECTTSCT--TSHH--HHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSSS----------
T ss_pred eEEEEECCccCCCCCC--cchh--hHHHHHHHHHHcCCCCceeecCCCceeeeeEHHHHHHHHHHHHhcC----------
Confidence 9999999999975421 1100 001223334445542 345677889999999999999998887532
Q ss_pred CCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 504 ASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 504 ~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++++.||++.+.+.++
T Consensus 244 ----------~~~~~ni~~~--~~~s~~e~~~~i~~~~g 270 (372)
T 1db3_A 244 ----------QPEDFVIATG--VQYSVRQFVEMAAAQLG 270 (372)
T ss_dssp ----------SCCCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred ----------CCceEEEcCC--CceeHHHHHHHHHHHhC
Confidence 2479999998 88999999999999887
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=99.85 E-value=6.1e-21 Score=198.46 Aligned_cols=226 Identities=13% Similarity=0.093 Sum_probs=160.6
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hH--HHhhhhhhhhhc--CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEc
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LF--DRLKNEQADILQ--RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHA 311 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~--~~l~~~~~~~~~--~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~ 311 (596)
.+||.+.+|.-+..-+..++..+ ++ ++........+. .++.++.||++++ +.+..++++ +|+||||
T Consensus 23 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~------~~~~~~~~~~~~D~vih~ 96 (333)
T 2q1w_A 23 KVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADH------ALVNQLIGDLQPDAVVHT 96 (333)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCH------HHHHHHHHHHCCSEEEEC
T ss_pred EEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCH------HHHHHHHhccCCcEEEEC
Confidence 36777777766666666555431 11 110000001111 4789999999965 358888888 9999999
Q ss_pred CccCChh--hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccccc----CCc-cccccccCCCCChHHHHHHHhcC
Q psy5825 312 AASLRFD--ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHS----YRE-DIQEEFYPPLFSYEDLAHVMQTT 384 (596)
Q Consensus 312 AA~v~~~--~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g----~~~-~i~E~~~~~~~~~~~~~~~~~~~ 384 (596)
||..... .... +.+|+.||.+|+++|.. .++++|||+||+++|| ... .++|+.
T Consensus 97 A~~~~~~~~~~~~--~~~N~~~~~~l~~a~~~-~~~~~iV~~SS~~~~g~~~~~~~~~~~E~~----------------- 156 (333)
T 2q1w_A 97 AASYKDPDDWYND--TLTNCVGGSNVVQAAKK-NNVGRFVYFQTALCYGVKPIQQPVRLDHPR----------------- 156 (333)
T ss_dssp CCCCSCTTCHHHH--HHHHTHHHHHHHHHHHH-TTCSEEEEEEEGGGGCSCCCSSSBCTTSCC-----------------
T ss_pred ceecCCCccCChH--HHHHHHHHHHHHHHHHH-hCCCEEEEECcHHHhCCCcccCCCCcCCCC-----------------
Confidence 9987642 2222 89999999999999998 5789999999999998 321 111110
Q ss_pred ChHHHHhhhhhhcCCCCC-chHHHHHHHHHHHHHH-HhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhcc
Q psy5825 385 NQEELEILSSMLFGGIYN-NSYSFTKAIGESVVEK-YLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGL 462 (596)
Q Consensus 385 ~e~~~~~~~p~~~~~~~~-~~Y~~SK~~aE~lv~~-~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~ 462 (596)
. .. +.|+.||+++|++++. +. +++|+||++|||+... ......++..+..|.
T Consensus 157 --------------~-p~~~~Y~~sK~~~E~~~~~s~~---~~~ilR~~~v~gp~~~--------~~~~~~~~~~~~~~~ 210 (333)
T 2q1w_A 157 --------------N-PANSSYAISKSANEDYLEYSGL---DFVTFRLANVVGPRNV--------SGPLPIFFQRLSEGK 210 (333)
T ss_dssp --------------C-CTTCHHHHHHHHHHHHHHHHTC---CEEEEEESEEESTTCC--------SSHHHHHHHHHHTTC
T ss_pred --------------C-CCCCchHHHHHHHHHHHHhhhC---CeEEEeeceEECcCCc--------CcHHHHHHHHHHcCC
Confidence 0 22 6799999999999988 64 8999999999997520 011233444445554
Q ss_pred ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 463 IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 463 ~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++ +....+|++|+|||++++.++... . +++||++++ .++++.+|++.|.+.++
T Consensus 211 --~~~~-~~~~~~~i~v~Dva~ai~~~~~~~-------------------~-g~~~~v~~~--~~~s~~e~~~~i~~~~g 265 (333)
T 2q1w_A 211 --KCFV-TKARRDFVFVKDLARATVRAVDGV-------------------G-HGAYHFSSG--TDVAIKELYDAVVEAMA 265 (333)
T ss_dssp --CCEE-EECEECEEEHHHHHHHHHHHHTTC-------------------C-CEEEECSCS--CCEEHHHHHHHHHHHTT
T ss_pred --eeeC-CCceEeeEEHHHHHHHHHHHHhcC-------------------C-CCEEEeCCC--CCccHHHHHHHHHHHhC
Confidence 3444 567889999999999999988542 2 679999998 88999999999999987
|
| >2rh8_A Anthocyanidin reductase; flavonoids, rossmann fold, short chain dehydrogenase/reductase, oxidoreductase; 2.22A {Vitis vinifera} PDB: 3hfs_A | Back alignment and structure |
|---|
Probab=99.84 E-value=2.7e-21 Score=201.19 Aligned_cols=210 Identities=15% Similarity=0.129 Sum_probs=137.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhh--hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDE--LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTL 354 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~--~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~ 354 (596)
.++.++.|||+++.. +..+++++|+|||+||.+.+.. +...++.+||.||.+|+++|....++++|||+||+
T Consensus 59 ~~~~~~~~Dl~d~~~------~~~~~~~~D~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~~~v~r~V~~SS~ 132 (338)
T 2rh8_A 59 GDLKIFRADLTDELS------FEAPIAGCDFVFHVATPVHFASEDPENDMIKPAIQGVVNVMKACTRAKSVKRVILTSSA 132 (338)
T ss_dssp SCEEEEECCTTTSSS------SHHHHTTCSEEEEESSCCCC---------CHHHHHHHHHHHHHHHHCTTCCEEEEECCH
T ss_pred CcEEEEecCCCChHH------HHHHHcCCCEEEEeCCccCCCCCCcHHHHHHHHHHHHHHHHHHHHHcCCcCEEEEEecH
Confidence 578999999998765 7788899999999999875432 22348899999999999999984348999999998
Q ss_pred cc-ccCC-----ccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEE
Q psy5825 355 YT-HSYR-----EDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLA 426 (596)
Q Consensus 355 ~v-~g~~-----~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~ 426 (596)
++ |+.. ..++|+..... ... .|. .. ..+.|+.||+++|++++.+. .|++++
T Consensus 133 ~~~~~~~~~~~~~~~~E~~~~~~---------------~~~---~~~--~~-~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ 191 (338)
T 2rh8_A 133 AAVTINQLDGTGLVVDEKNWTDI---------------EFL---TSA--KP-PTWGYPASKTLAEKAAWKFAEENNIDLI 191 (338)
T ss_dssp HHHHHHHHTCSCCCCCTTTTTCC---------------------------C-CCCCCTTSCCHHHHHHHHHHHHHTCCEE
T ss_pred HHeecCCcCCCCcccChhhccch---------------hhc---ccc--CC-ccchHHHHHHHHHHHHHHHHHHcCCcEE
Confidence 74 3321 12333221100 000 000 00 11259999999999999876 699999
Q ss_pred EecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecC------CCCccccccHHHHHHHHHHHHHhhhccCCCC
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAK------HDKKCDLIPVDVATNMMLGVVWKTALDHGHV 500 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~------~~~~~d~ipVDdva~aii~~~~~~~~~~~~~ 500 (596)
|+||++|||+...+. .......+.....|... ..+. +...++||||+|||++++.++....
T Consensus 192 ~lrp~~v~Gp~~~~~------~~~~~~~~~~~~~g~~~-~~~~~~~~~~~~~~~~~i~v~Dva~a~~~~~~~~~------ 258 (338)
T 2rh8_A 192 TVIPTLMAGSSLTSD------VPSSIGLAMSLITGNEF-LINGMKGMQMLSGSVSIAHVEDVCRAHIFVAEKES------ 258 (338)
T ss_dssp EEEECEEESCCSSSS------CCHHHHHHHHHHHTCHH-HHHHHHHHHHHHSSEEEEEHHHHHHHHHHHHHCTT------
T ss_pred EEeCCceECCCCCCC------CCchHHHHHHHHcCCcc-ccccccccccccCcccEEEHHHHHHHHHHHHcCCC------
Confidence 999999999865321 11111112222233211 1110 1123489999999999999885421
Q ss_pred CCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 501 APPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 501 ~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .+++.+|++.|.+.++
T Consensus 259 -------------~~~~~~~~~~---~~s~~e~~~~l~~~~~ 284 (338)
T 2rh8_A 259 -------------ASGRYICCAA---NTSVPELAKFLSKRYP 284 (338)
T ss_dssp -------------CCEEEEECSE---EECHHHHHHHHHHHCT
T ss_pred -------------cCCcEEEecC---CCCHHHHHHHHHHhCC
Confidence 2447988764 5899999999998765
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=99.84 E-value=4.2e-20 Score=192.20 Aligned_cols=206 Identities=12% Similarity=0.142 Sum_probs=139.8
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh--hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD--ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~--~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
+++++.|||+++.. +..++.++|+|||+||.+.+. .+...++.+|+.||.+|+++|.....+++|||+||++
T Consensus 57 ~~~~~~~Dl~d~~~------~~~~~~~~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~~~~~riV~~SS~~ 130 (337)
T 2c29_D 57 HLTLWKADLADEGS------FDEAIKGCTGVFHVATPMDFESKDPENEVIKPTIEGMLGIMKSCAAAKTVRRLVFTSSAG 130 (337)
T ss_dssp HEEEEECCTTSTTT------THHHHTTCSEEEECCCCCCSSCSSHHHHTHHHHHHHHHHHHHHHHHHSCCCEEEEECCGG
T ss_pred eEEEEEcCCCCHHH------HHHHHcCCCEEEEeccccCCCCCChHHHHHHHHHHHHHHHHHHHHhCCCccEEEEeeeHh
Confidence 68899999998765 778889999999999987543 2234588999999999999999843489999999998
Q ss_pred c-ccCCc---cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 356 T-HSYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 356 v-~g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
+ |+... .++|+.+. +..... +. .. ..+.|+.||+++|++++.+. .|++++++|
T Consensus 131 ~~~~~~~~~~~~~E~~~~---------------~~~~~~---~~--~~-~~~~Y~~sK~~~E~~~~~~~~~~gi~~~~lr 189 (337)
T 2c29_D 131 TVNIQEHQLPVYDESCWS---------------DMEFCR---AK--KM-TAWMYFVSKTLAEQAAWKYAKENNIDFITII 189 (337)
T ss_dssp GTSCSSSCCSEECTTCCC---------------CHHHHH---HH--CC-TTHHHHHHHHHHHHHHHHHHHHHTCCEEEEE
T ss_pred hcccCCCCCcccCcccCC---------------chhhhc---cc--CC-ccchHHHHHHHHHHHHHHHHHHcCCcEEEEe
Confidence 4 44321 23332111 000000 00 00 12469999999999998876 699999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHH--HHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAG--AALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLV 507 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~--~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~ 507 (596)
|++|||+...+. .+..+... ...|... .++.. ....|+||+|||++++.++....
T Consensus 190 p~~v~Gp~~~~~--------~~~~~~~~~~~~~g~~~-~~~~~-~~~~~i~v~Dva~a~~~~~~~~~------------- 246 (337)
T 2c29_D 190 PTLVVGPFIMSS--------MPPSLITALSPITGNEA-HYSII-RQGQFVHLDDLCNAHIYLFENPK------------- 246 (337)
T ss_dssp ECEEESCCSCSS--------CCHHHHHHTHHHHTCGG-GHHHH-TEEEEEEHHHHHHHHHHHHHCTT-------------
T ss_pred CCceECCCCCCC--------CCchHHHHHHHHcCCCc-ccccc-CCCCEEEHHHHHHHHHHHhcCcc-------------
Confidence 999999864321 11111111 1223211 11111 12359999999999999886421
Q ss_pred CCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 508 APIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 508 ~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+.+|+++++ .+++.+|++.|.+.++
T Consensus 247 ------~~~~~~~~~~---~~s~~e~~~~i~~~~~ 272 (337)
T 2c29_D 247 ------AEGRYICSSH---DCIILDLAKMLREKYP 272 (337)
T ss_dssp ------CCEEEEECCE---EEEHHHHHHHHHHHCT
T ss_pred ------cCceEEEeCC---CCCHHHHHHHHHHHCC
Confidence 2347877654 5899999999998774
|
| >2p4h_X Vestitone reductase; NADPH-dependent reductase, isoflavonoid, plant protein; 1.40A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.84 E-value=1.8e-20 Score=193.38 Aligned_cols=206 Identities=15% Similarity=0.147 Sum_probs=137.6
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhh--hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDE--LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~--~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
++.++.|||+++. .+..+++++|+|||||+.+.+.. +...++.+|+.||.+|+++|....++++|||+||++
T Consensus 54 ~~~~~~~Dl~d~~------~~~~~~~~~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~l~~aa~~~~~~~~iV~~SS~~ 127 (322)
T 2p4h_X 54 KLHFFNADLSNPD------SFAAAIEGCVGIFHTASPIDFAVSEPEEIVTKRTVDGALGILKACVNSKTVKRFIYTSSGS 127 (322)
T ss_dssp HEEECCCCTTCGG------GGHHHHTTCSEEEECCCCC--------CHHHHHHHHHHHHHHHHHTTCSSCCEEEEEEEGG
T ss_pred ceEEEecCCCCHH------HHHHHHcCCCEEEEcCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhcCCccEEEEeccHH
Confidence 5889999999765 38888999999999998764332 133488999999999999999843689999999998
Q ss_pred cc-cCCc---cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCC-chHHHHHHHHHHHHHHHh--cCCCEEEe
Q psy5825 356 TH-SYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYN-NSYSFTKAIGESVVEKYL--YKLPLAMV 428 (596)
Q Consensus 356 v~-g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~-~~Y~~SK~~aE~lv~~~~--~gl~~~Il 428 (596)
++ +... .++|+..+ +..... +. . .. +.|+.||+++|++++.++ .|++++|+
T Consensus 128 ~~~~~~~~~~~~~e~~~~---------------~~~~~~---~~--~--p~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~l 185 (322)
T 2p4h_X 128 AVSFNGKDKDVLDESDWS---------------DVDLLR---SV--K--PFGWNYAVSKTLAEKAVLEFGEQNGIDVVTL 185 (322)
T ss_dssp GTSCSSSCCSEECTTCCC---------------CHHHHH---HH--C--CTTHHHHHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred HcccCCCCCeecCCcccc---------------chhhhc---cc--C--cccccHHHHHHHHHHHHHHHHHhcCCcEEEE
Confidence 54 3211 22332110 000100 10 0 11 269999999999999876 79999999
Q ss_pred cCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 429 RPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 429 Rp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
||++|||+...+. +......+..+..|....++ . ..++|+||+|||++++.++....
T Consensus 186 rp~~v~g~~~~~~------~~~~~~~~~~~~~g~~~~~~-~--~~~~~i~v~Dva~a~~~~~~~~~-------------- 242 (322)
T 2p4h_X 186 ILPFIVGRFVCPK------LPDSIEKALVLVLGKKEQIG-V--TRFHMVHVDDVARAHIYLLENSV-------------- 242 (322)
T ss_dssp EECEEESCCCSSS------CCHHHHHHTHHHHSCGGGCC-E--EEEEEEEHHHHHHHHHHHHHSCC--------------
T ss_pred cCCceECCCCCCC------CCchHHHHHHHHhCCCccCc-C--CCcCEEEHHHHHHHHHHHhhCcC--------------
Confidence 9999999854211 11111112222333221122 1 33489999999999999885421
Q ss_pred CCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 509 PIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..| .|| +++ .++|+.+|++.|.+.++
T Consensus 243 ----~~g-~~~-~~~--~~~s~~e~~~~i~~~~~ 268 (322)
T 2p4h_X 243 ----PGG-RYN-CSP--FIVPIEEMSQLLSAKYP 268 (322)
T ss_dssp ----CCE-EEE-CCC--EEEEHHHHHHHHHHHCT
T ss_pred ----CCC-CEE-EcC--CCCCHHHHHHHHHHhCC
Confidence 123 599 455 67999999999988764
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=99.83 E-value=7.3e-21 Score=186.43 Aligned_cols=178 Identities=13% Similarity=0.063 Sum_probs=129.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.||++++ +.+..++.++|+|||||+... ....++.+|+.|+.+|+++|.. .++++|||+||+++
T Consensus 46 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~---~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~Ss~~~ 115 (227)
T 3dhn_A 46 EHLKVKKADVSSL------DEVCEVCKGADAVISAFNPGW---NNPDIYDETIKVYLTIIDGVKK-AGVNRFLMVGGAGS 115 (227)
T ss_dssp TTEEEECCCTTCH------HHHHHHHTTCSEEEECCCC---------CCSHHHHHHHHHHHHHHH-TTCSEEEEECCSTT
T ss_pred CceEEEEecCCCH------HHHHHHhcCCCEEEEeCcCCC---CChhHHHHHHHHHHHHHHHHHH-hCCCEEEEeCChhh
Confidence 6799999999954 458899999999999998752 1223778899999999999998 57899999999998
Q ss_pred ccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCcc
Q psy5825 357 HSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIV 433 (596)
Q Consensus 357 ~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V 433 (596)
++... ...++ .+. . ..+.|+.+|+.+|.++..+. .|++++|+||++|
T Consensus 116 ~~~~~~~~~~~--------------------------~~~---~-p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilrp~~v 165 (227)
T 3dhn_A 116 LFIAPGLRLMD--------------------------SGE---V-PENILPGVKALGEFYLNFLMKEKEIDWVFFSPAAD 165 (227)
T ss_dssp SEEETTEEGGG--------------------------TTC---S-CGGGHHHHHHHHHHHHHTGGGCCSSEEEEEECCSE
T ss_pred ccCCCCCcccc--------------------------CCc---c-hHHHHHHHHHHHHHHHHHHhhccCccEEEEeCCcc
Confidence 76422 11110 000 0 23679999999999988877 8999999999999
Q ss_pred ccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCC
Q psy5825 434 VSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRT 513 (596)
Q Consensus 434 ~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (596)
||+.... + .. ..+....++. +. .++||+|+|||++++.++..+. .
T Consensus 166 ~g~~~~~--~----~~---------~~~~~~~~~~-~~-~~~~i~~~Dva~ai~~~l~~~~------------------~ 210 (227)
T 3dhn_A 166 MRPGVRT--G----RY---------RLGKDDMIVD-IV-GNSHISVEDYAAAMIDELEHPK------------------H 210 (227)
T ss_dssp EESCCCC--C----CC---------EEESSBCCCC-TT-SCCEEEHHHHHHHHHHHHHSCC------------------C
T ss_pred cCCCccc--c----ce---------eecCCCcccC-CC-CCcEEeHHHHHHHHHHHHhCcc------------------c
Confidence 9985421 1 00 0121111221 22 2899999999999999998754 2
Q ss_pred CCCeEEccCCCCCcccHH
Q psy5825 514 DPPVYNLSISSSYPITWL 531 (596)
Q Consensus 514 ~~~vyni~~~~~~~vt~~ 531 (596)
.+++||++++ ++.+|+
T Consensus 211 ~g~~~~~~~~--~~~~~~ 226 (227)
T 3dhn_A 211 HQERFTIGYL--EHHHHH 226 (227)
T ss_dssp CSEEEEEECC--SCCC--
T ss_pred cCcEEEEEee--hhcccC
Confidence 5889999999 888875
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=99.83 E-value=6.7e-20 Score=186.01 Aligned_cols=173 Identities=14% Similarity=0.172 Sum_probs=135.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.||++++ +.+..+++++|+||||||.. +. ..+|+.|+.+|+++|.. .++++|||+||.++
T Consensus 45 ~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~-~~------~~~n~~~~~~l~~a~~~-~~~~~~v~~Ss~~~ 110 (287)
T 2jl1_A 45 QGVEVRHGDYNQP------ESLQKAFAGVSKLLFISGPH-YD------NTLLIVQHANVVKAARD-AGVKHIAYTGYAFA 110 (287)
T ss_dssp TTCEEEECCTTCH------HHHHHHTTTCSEEEECCCCC-SC------HHHHHHHHHHHHHHHHH-TTCSEEEEEEETTG
T ss_pred cCCeEEEeccCCH------HHHHHHHhcCCEEEEcCCCC-cC------chHHHHHHHHHHHHHHH-cCCCEEEEECCCCC
Confidence 4688999999965 45888999999999999963 21 15799999999999998 58899999999987
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
+.. +..|+.+|+.+|+++.. .|++++|+||+.++|+
T Consensus 111 ~~~------------------------------------------~~~y~~~K~~~E~~~~~--~~~~~~ilrp~~~~~~ 146 (287)
T 2jl1_A 111 EES------------------------------------------IIPLAHVHLATEYAIRT--TNIPYTFLRNALYTDF 146 (287)
T ss_dssp GGC------------------------------------------CSTHHHHHHHHHHHHHH--TTCCEEEEEECCBHHH
T ss_pred CCC------------------------------------------CCchHHHHHHHHHHHHH--cCCCeEEEECCEeccc
Confidence 531 13599999999999975 5899999999998875
Q ss_pred CCCCccccCCCCCCcHHHHHHHH-hccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAA-LGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDP 515 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~-~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (596)
.. . .++..+. .|.. ..+.++..++|++|+|+|++++.++.... ..+
T Consensus 147 ~~---~----------~~~~~~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~~------------------~~g 193 (287)
T 2jl1_A 147 FV---N----------EGLRASTESGAI--VTNAGSGIVNSVTRNELALAAATVLTEEG------------------HEN 193 (287)
T ss_dssp HS---S----------GGGHHHHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHTSSS------------------CTT
T ss_pred cc---h----------hhHHHHhhCCce--eccCCCCccCccCHHHHHHHHHHHhcCCC------------------CCC
Confidence 21 0 1111222 3332 23446778899999999999999886532 246
Q ss_pred CeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 516 PVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 516 ~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
++||++++ .++|+.|+++.+.+.++
T Consensus 194 ~~~~i~~~--~~~s~~e~~~~i~~~~g 218 (287)
T 2jl1_A 194 KTYNLVSN--QPWTFDELAQILSEVSG 218 (287)
T ss_dssp EEEEECCS--SCBCHHHHHHHHHHHHS
T ss_pred cEEEecCC--CcCCHHHHHHHHHHHHC
Confidence 79999998 89999999999999988
|
| >3oh8_A Nucleoside-diphosphate sugar epimerase (SULA FAMI; DUF1731_C, northeast structural genomics consortium, NESG, C PSI-biology; 2.00A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.83 E-value=3.5e-20 Score=204.55 Aligned_cols=225 Identities=13% Similarity=0.060 Sum_probs=154.3
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF 317 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~ 317 (596)
.+||.+.+|.-+..-+..++..+ ++-..+. + .+...+.+|+.+. +..++.++|+||||||....
T Consensus 149 ~VLVTGatG~IG~~l~~~L~~~G~~V~~l~R~--~----~~~~~v~~d~~~~--------~~~~l~~~D~Vih~A~~~~~ 214 (516)
T 3oh8_A 149 TVAITGSRGLVGRALTAQLQTGGHEVIQLVRK--E----PKPGKRFWDPLNP--------ASDLLDGADVLVHLAGEPIF 214 (516)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTCEEEEEESS--S----CCTTCEECCTTSC--------CTTTTTTCSEEEECCCC---
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEECC--C----CCccceeecccch--------hHHhcCCCCEEEECCCCccc
Confidence 46788887877776666655432 1100000 0 1222356777643 23456799999999998642
Q ss_pred ----hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccC-Cc--cccccccCCCCChHHHHHHHhcCChHHHH
Q psy5825 318 ----DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSY-RE--DIQEEFYPPLFSYEDLAHVMQTTNQEELE 390 (596)
Q Consensus 318 ----~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~-~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~ 390 (596)
......++.+|+.||.+|+++|....++++|||+||++|||. .. .+.|+..
T Consensus 215 ~~~~~~~~~~~~~~Nv~gt~~ll~a~a~~~~~~r~V~~SS~~vyg~~~~~~~~~E~~~---------------------- 272 (516)
T 3oh8_A 215 GRFNDSHKEAIRESRVLPTKFLAELVAESTQCTTMISASAVGFYGHDRGDEILTEESE---------------------- 272 (516)
T ss_dssp --CCGGGHHHHHHHTHHHHHHHHHHHHHCSSCCEEEEEEEGGGGCSEEEEEEECTTSC----------------------
T ss_pred cccchhHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEeCcceEecCCCCCCccCCCCC----------------------
Confidence 234566889999999999999544468899999999999983 22 2333211
Q ss_pred hhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHH-HHhccceEeec
Q psy5825 391 ILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAG-AALGLIHTFYA 468 (596)
Q Consensus 391 ~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~-~~~g~~~~~~~ 468 (596)
. ..+.|+.+|..+|.++..+. .|++++|+||++|||+.. +....+.. +..|. ..+++
T Consensus 273 ----~-----~~~~y~~~~~~~E~~~~~~~~~gi~~~ilRp~~v~Gp~~-----------~~~~~~~~~~~~g~-~~~~g 331 (516)
T 3oh8_A 273 ----S-----GDDFLAEVCRDWEHATAPASDAGKRVAFIRTGVALSGRG-----------GMLPLLKTLFSTGL-GGKFG 331 (516)
T ss_dssp ----C-----CSSHHHHHHHHHHHTTHHHHHTTCEEEEEEECEEEBTTB-----------SHHHHHHHTTC----CCCCT
T ss_pred ----C-----CcChHHHHHHHHHHHHHHHHhCCCCEEEEEeeEEECCCC-----------ChHHHHHHHHHhCC-CcccC
Confidence 0 22569999999999887766 899999999999999742 12222222 22332 23567
Q ss_pred CCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 469 KHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 469 ~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
++...++||||+|||++++.++.... .+++||++++ .++++.+|++.|.+.++
T Consensus 332 ~g~~~~~~i~v~Dva~ai~~~l~~~~-------------------~~g~~ni~~~--~~~s~~el~~~i~~~~g 384 (516)
T 3oh8_A 332 DGTSWFSWIAIDDLTDIYYRAIVDAQ-------------------ISGPINAVAP--NPVSNADMTKILATSMH 384 (516)
T ss_dssp TSCCEECEEEHHHHHHHHHHHHHCTT-------------------CCEEEEESCS--CCEEHHHHHHHTTC---
T ss_pred CCCceEceEeHHHHHHHHHHHHhCcc-------------------cCCcEEEECC--CCCCHHHHHHHHHHHhC
Confidence 78899999999999999999987542 2459999999 89999999999998887
|
| >4b4o_A Epimerase family protein SDR39U1; isomerase; HET: NDP PE4; 2.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.82 E-value=3e-19 Score=182.61 Aligned_cols=181 Identities=15% Similarity=0.023 Sum_probs=131.3
Q ss_pred HHhccccEEEEcCccC--C----hhhh-HHHHHHHHHHHHHHHHHHHHhcC-CCceEEEecCcccccCCc--cccccccC
Q psy5825 300 FIQHHIHVIIHAAASL--R----FDEL-IQDAFTLNIQATRELLDLATRCS-QLKAILHVSTLYTHSYRE--DIQEEFYP 369 (596)
Q Consensus 300 ~l~~~vd~ViH~AA~v--~----~~~~-~~~~~~~NV~GT~~LL~~a~~~~-~vkrfV~vSS~~v~g~~~--~i~E~~~~ 369 (596)
..+.++|+|||||+.. . +... ...++.+|+.||.+|+++|..+. ....|||+||+++||... .+.|+..+
T Consensus 47 ~~l~~~d~vihla~~~i~~~~~~~~~~~~~~~~~~~v~~t~~l~~~~~~~~~~~~~~i~~Ss~~vyg~~~~~~~~E~~p~ 126 (298)
T 4b4o_A 47 SGLPSCDAAVNLAGENILNPLRRWNETFQKEVLGSRLETTQLLAKAITKAPQPPKAWVLVTGVAYYQPSLTAEYDEDSPG 126 (298)
T ss_dssp HCCCSCSEEEECCCCCSSCTTSCCCHHHHHHHHHHHHHHHHHHHHHHHHCSSCCSEEEEEEEGGGSCCCSSCCBCTTCCC
T ss_pred hhccCCCEEEEeccCcccchhhhhhhhhhhhhhhHHHHHHHHHHHHHHHhCCCceEEEEEeeeeeecCCCCCcccccCCc
Confidence 3457899999999852 1 2222 34578999999999999998742 345699999999999754 23332110
Q ss_pred CCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCC
Q psy5825 370 PLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLY 449 (596)
Q Consensus 370 ~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~ 449 (596)
. ..+.|+.++...|........+++++|+||++|||+.. |+
T Consensus 127 -----------------------------~-~~~~~~~~~~~~e~~~~~~~~~~~~~~~r~~~v~g~~~----~~----- 167 (298)
T 4b4o_A 127 -----------------------------G-DFDFFSNLVTKWEAAARLPGDSTRQVVVRSGVVLGRGG----GA----- 167 (298)
T ss_dssp -----------------------------S-CSSHHHHHHHHHHHHHCCSSSSSEEEEEEECEEECTTS----HH-----
T ss_pred -----------------------------c-ccchhHHHHHHHHHHHHhhccCCceeeeeeeeEEcCCC----Cc-----
Confidence 0 22457777777776543333889999999999999742 11
Q ss_pred CcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 450 GPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 450 ~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
...++..+..|.. ..+|++.+.++||||||+|++++.++.+.. ..++||++++ +++|
T Consensus 168 -~~~~~~~~~~~~~-~~~g~g~~~~~~ihv~Dva~a~~~~~~~~~-------------------~~g~yn~~~~--~~~t 224 (298)
T 4b4o_A 168 -MGHMLLPFRLGLG-GPIGSGHQFFPWIHIGDLAGILTHALEANH-------------------VHGVLNGVAP--SSAT 224 (298)
T ss_dssp -HHHHHHHHHTTCC-CCBTTSCSBCCEEEHHHHHHHHHHHHHCTT-------------------CCEEEEESCS--CCCB
T ss_pred -hhHHHHHHhcCCc-ceecccCceeecCcHHHHHHHHHHHHhCCC-------------------CCCeEEEECC--CccC
Confidence 1233333344433 345889999999999999999999987643 3459999999 9999
Q ss_pred HHHHHHHHHHHcc
Q psy5825 530 WLEYMNSVQAAGK 542 (596)
Q Consensus 530 ~~el~~~l~~~~~ 542 (596)
+.||++.|.+.++
T Consensus 225 ~~e~~~~ia~~lg 237 (298)
T 4b4o_A 225 NAEFAQTFGAALG 237 (298)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHhC
Confidence 9999999999988
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=99.80 E-value=4e-19 Score=180.66 Aligned_cols=173 Identities=12% Similarity=0.055 Sum_probs=128.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+++++.||++++ +.+..+++++|+|||||+..... ..|+.++.+|+++|.. .++++|||+||.+.
T Consensus 44 ~~v~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~-------~~~~~~~~~l~~aa~~-~gv~~iv~~Ss~~~ 109 (289)
T 3e48_A 44 GKVSVRQLDYFNQ------ESMVEAFKGMDTVVFIPSIIHPS-------FKRIPEVENLVYAAKQ-SGVAHIIFIGYYAD 109 (289)
T ss_dssp TTBEEEECCTTCH------HHHHHHTTTCSEEEECCCCCCSH-------HHHHHHHHHHHHHHHH-TTCCEEEEEEESCC
T ss_pred CCCEEEEcCCCCH------HHHHHHHhCCCEEEEeCCCCccc-------hhhHHHHHHHHHHHHH-cCCCEEEEEcccCC
Confidence 6799999999965 45899999999999999986532 3489999999999998 57999999999543
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
... .+..+......+|..+.. .|++++|+||++++|+
T Consensus 110 ~~~-----------------------------------------~~~~~~~~~~~~e~~~~~--~g~~~~ilrp~~~~~~ 146 (289)
T 3e48_A 110 QHN-----------------------------------------NPFHMSPYFGYASRLLST--SGIDYTYVRMAMYMDP 146 (289)
T ss_dssp STT-----------------------------------------CCSTTHHHHHHHHHHHHH--HCCEEEEEEECEESTT
T ss_pred CCC-----------------------------------------CCCccchhHHHHHHHHHH--cCCCEEEEeccccccc
Confidence 111 000122222345555544 5899999999999885
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPP 516 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (596)
. ..++..+..+.. .+.+.++..++||+++|+|++++.++..... .++
T Consensus 147 ~--------------~~~~~~~~~~~~-~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~------------------~g~ 193 (289)
T 3e48_A 147 L--------------KPYLPELMNMHK-LIYPAGDGRINYITRNDIARGVIAIIKNPDT------------------WGK 193 (289)
T ss_dssp H--------------HHHHHHHHHHTE-ECCCCTTCEEEEECHHHHHHHHHHHHHCGGG------------------TTC
T ss_pred c--------------HHHHHHHHHCCC-EecCCCCceeeeEEHHHHHHHHHHHHcCCCc------------------CCc
Confidence 2 122223322222 2344578889999999999999999876542 378
Q ss_pred eEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 517 VYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 517 vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+||++ + ..+|+.|+++.|.+.++
T Consensus 194 ~~~~~-~--~~~s~~e~~~~~~~~~g 216 (289)
T 3e48_A 194 RYLLS-G--YSYDMKELAAILSEASG 216 (289)
T ss_dssp EEEEC-C--EEEEHHHHHHHHHHHHT
T ss_pred eEEeC-C--CcCCHHHHHHHHHHHHC
Confidence 99999 8 89999999999999988
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=99.79 E-value=2.9e-18 Score=172.43 Aligned_cols=182 Identities=19% Similarity=0.149 Sum_probs=136.0
Q ss_pred EEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 282 ISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 282 v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
+.+|++++ +.+..++.+ +|+||||||..... ..+..++.+|+.|+.+|+++|.. .++ +|||+||.++
T Consensus 39 ~~~Dl~~~------~~~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~-~iv~~SS~~~ 110 (273)
T 2ggs_A 39 YKLDLTDF------PRLEDFIIKKRPDVIINAAAMTDVDKCEIEKEKAYKINAEAVRHIVRAGKV-IDS-YIVHISTDYV 110 (273)
T ss_dssp EECCTTSH------HHHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHH-TTC-EEEEEEEGGG
T ss_pred ceeccCCH------HHHHHHHHhcCCCEEEECCcccChhhhhhCHHHHHHHhHHHHHHHHHHHHH-hCC-eEEEEeccee
Confidence 67888754 457777776 99999999987653 35667899999999999999998 455 9999999999
Q ss_pred ccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCcccc
Q psy5825 357 HSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVS 435 (596)
Q Consensus 357 ~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G 435 (596)
|+... .+.|+..+ . ..+.|+.||+++|.+++. ++++++||+.|||
T Consensus 111 ~~~~~~~~~e~~~~-----------------------------~-~~~~Y~~sK~~~e~~~~~----~~~~~iR~~~v~G 156 (273)
T 2ggs_A 111 FDGEKGNYKEEDIP-----------------------------N-PINYYGLSKLLGETFALQ----DDSLIIRTSGIFR 156 (273)
T ss_dssp SCSSSCSBCTTSCC-----------------------------C-CSSHHHHHHHHHHHHHCC----TTCEEEEECCCBS
T ss_pred EcCCCCCcCCCCCC-----------------------------C-CCCHHHHHHHHHHHHHhC----CCeEEEecccccc
Confidence 97533 22222100 0 236799999999999865 7889999999998
Q ss_pred CCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCC
Q psy5825 436 TWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDP 515 (596)
Q Consensus 436 ~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (596)
+. + ....++..+..|....+.++ ..++++++|+|++++.++... .+
T Consensus 157 ~~-----~------~~~~~~~~~~~~~~~~~~~~---~~~~~~~~dva~~i~~~~~~~--------------------~~ 202 (273)
T 2ggs_A 157 NK-----G------FPIYVYKTLKEGKTVFAFKG---YYSPISARKLASAILELLELR--------------------KT 202 (273)
T ss_dssp SS-----S------HHHHHHHHHHTTCCEEEESC---EECCCBHHHHHHHHHHHHHHT--------------------CC
T ss_pred cc-----H------HHHHHHHHHHcCCCEEeecC---CCCceEHHHHHHHHHHHHhcC--------------------cC
Confidence 21 1 11223333444543334443 789999999999999998653 13
Q ss_pred CeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 516 PVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 516 ~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
++||+++ ..+++.+|++.+.+.++
T Consensus 203 g~~~i~~---~~~s~~e~~~~~~~~~g 226 (273)
T 2ggs_A 203 GIIHVAG---ERISRFELALKIKEKFN 226 (273)
T ss_dssp EEEECCC---CCEEHHHHHHHHHHHTT
T ss_pred CeEEECC---CcccHHHHHHHHHHHhC
Confidence 4999987 57999999999999988
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=5.7e-19 Score=178.89 Aligned_cols=170 Identities=12% Similarity=0.090 Sum_probs=129.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.||++++ +.+..+++++|+|||||+... ..|+.+|.+|+++|.. .++++|||+||.++
T Consensus 44 ~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~~---------~~~~~~~~~l~~a~~~-~~~~~~v~~Ss~~~ 107 (286)
T 2zcu_A 44 QGITVRQADYGDE------AALTSALQGVEKLLLISSSEV---------GQRAPQHRNVINAAKA-AGVKFIAYTSLLHA 107 (286)
T ss_dssp TTCEEEECCTTCH------HHHHHHTTTCSEEEECC-----------------CHHHHHHHHHHH-HTCCEEEEEEETTT
T ss_pred CCCeEEEcCCCCH------HHHHHHHhCCCEEEEeCCCCc---------hHHHHHHHHHHHHHHH-cCCCEEEEECCCCC
Confidence 4688999999964 458889999999999999531 2589999999999998 47899999999987
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
+. .+..|+.+|+.+|+++.. .|++++|+||+.++|+
T Consensus 108 ~~------------------------------------------~~~~y~~sK~~~e~~~~~--~~~~~~ilrp~~~~~~ 143 (286)
T 2zcu_A 108 DT------------------------------------------SPLGLADEHIETEKMLAD--SGIVYTLLRNGWYSEN 143 (286)
T ss_dssp TT------------------------------------------CCSTTHHHHHHHHHHHHH--HCSEEEEEEECCBHHH
T ss_pred CC------------------------------------------CcchhHHHHHHHHHHHHH--cCCCeEEEeChHHhhh
Confidence 62 113599999999999976 4899999999877663
Q ss_pred CCCCccccCCCCCCcHHHHHHHH-hccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAA-LGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDP 515 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~-~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (596)
.. .++..+. .+.+ ..+.++..++|++|+|+|++++.++.... ..+
T Consensus 144 ~~--------------~~~~~~~~~~~~--~~~~~~~~~~~i~~~Dva~~~~~~~~~~~------------------~~g 189 (286)
T 2zcu_A 144 YL--------------ASAPAALEHGVF--IGAAGDGKIASATRADYAAAAARVISEAG------------------HEG 189 (286)
T ss_dssp HH--------------TTHHHHHHHTEE--EESCTTCCBCCBCHHHHHHHHHHHHHSSS------------------CTT
T ss_pred hH--------------HHhHHhhcCCce--eccCCCCccccccHHHHHHHHHHHhcCCC------------------CCC
Confidence 11 1112222 2333 24456788999999999999999886532 247
Q ss_pred CeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 516 PVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 516 ~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
++||++++ ..+|+.||++.+.+.++
T Consensus 190 ~~~~i~~~--~~~s~~e~~~~i~~~~g 214 (286)
T 2zcu_A 190 KVYELAGD--SAWTLTQLAAELTKQSG 214 (286)
T ss_dssp CEEEECCS--SCBCHHHHHHHHHHHHS
T ss_pred ceEEEeCC--CcCCHHHHHHHHHHHHC
Confidence 89999998 88999999999999988
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=99.79 E-value=1.7e-18 Score=174.50 Aligned_cols=170 Identities=15% Similarity=0.164 Sum_probs=131.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.+||+++ +.+..+++++|+|||+||... ..++..++.+|+.||.+|+++|.. .++++|||+||+++
T Consensus 43 ~~~~~~~~Dl~d~------~~~~~~~~~~D~vi~~Ag~~~-~~~~~~~~~~N~~g~~~l~~a~~~-~~~~~iv~~SS~~~ 114 (267)
T 3rft_A 43 PNEECVQCDLADA------NAVNAMVAGCDGIVHLGGISV-EKPFEQILQGNIIGLYNLYEAARA-HGQPRIVFASSNHT 114 (267)
T ss_dssp TTEEEEECCTTCH------HHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEEEEGGG
T ss_pred CCCEEEEcCCCCH------HHHHHHHcCCCEEEECCCCcC-cCCHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEEcchHH
Confidence 5789999999954 458999999999999999853 456778999999999999999998 57899999999999
Q ss_pred ccCCc---cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCC
Q psy5825 357 HSYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPS 431 (596)
Q Consensus 357 ~g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~ 431 (596)
||... .+.|+. + .. ..+.|+.||+++|.+++.++ .|++++++||+
T Consensus 115 ~g~~~~~~~~~e~~--------------------------~---~~-~~~~Y~~sK~~~e~~~~~~a~~~g~~~~~vr~~ 164 (267)
T 3rft_A 115 IGYYPQTERLGPDV--------------------------P---AR-PDGLYGVSKCFGENLARMYFDKFGQETALVRIG 164 (267)
T ss_dssp GTTSBTTSCBCTTS--------------------------C---CC-CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEEC
T ss_pred hCCCCCCCCCCCCC--------------------------C---CC-CCChHHHHHHHHHHHHHHHHHHhCCeEEEEEee
Confidence 97532 222211 0 01 33679999999999998877 79999999999
Q ss_pred ccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCC
Q psy5825 432 IVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIP 511 (596)
Q Consensus 432 ~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~ 511 (596)
.|||+.. ++....+|++++|++.++..++.....
T Consensus 165 ~v~~~~~------------------------------~~~~~~~~~~~~d~a~~~~~~~~~~~~---------------- 198 (267)
T 3rft_A 165 SCTPEPN------------------------------NYRMLSTWFSHDDFVSLIEAVFRAPVL---------------- 198 (267)
T ss_dssp BCSSSCC------------------------------STTHHHHBCCHHHHHHHHHHHHHCSCC----------------
T ss_pred cccCCCC------------------------------CCCceeeEEcHHHHHHHHHHHHhCCCC----------------
Confidence 9998521 123345789999999999888865321
Q ss_pred CCCCCeEEccCCCCCcccHHHHH
Q psy5825 512 RTDPPVYNLSISSSYPITWLEYM 534 (596)
Q Consensus 512 ~~~~~vyni~~~~~~~vt~~el~ 534 (596)
...+|+++++ ++.+|.++.
T Consensus 199 --~~~~~~~~s~--~~~~~~~~~ 217 (267)
T 3rft_A 199 --GCPVVWGASA--NDAGWWDNS 217 (267)
T ss_dssp --CSCEEEECCC--CTTCCBCCG
T ss_pred --CceEEEEeCC--CCCCcccCh
Confidence 3457887777 566666553
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=99.78 E-value=2.4e-19 Score=174.92 Aligned_cols=170 Identities=13% Similarity=0.166 Sum_probs=131.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.||+++ +.+.+..+++++|+||||||.... .++.+|+.|+.+|+++|.. .++++|||+||+++
T Consensus 41 ~~~~~~~~D~~d-----~~~~~~~~~~~~d~vi~~ag~~~~-----~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS~~~ 109 (219)
T 3dqp_A 41 NNVKAVHFDVDW-----TPEEMAKQLHGMDAIINVSGSGGK-----SLLKVDLYGAVKLMQAAEK-AEVKRFILLSTIFS 109 (219)
T ss_dssp TTEEEEECCTTS-----CHHHHHTTTTTCSEEEECCCCTTS-----SCCCCCCHHHHHHHHHHHH-TTCCEEEEECCTTT
T ss_pred CCceEEEecccC-----CHHHHHHHHcCCCEEEECCcCCCC-----CcEeEeHHHHHHHHHHHHH-hCCCEEEEECcccc
Confidence 579999999997 145688889999999999998652 2667899999999999998 57899999999887
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
++... . .+.... ..+.|+.+|+++|.+++ ...|++++|+||++|||+
T Consensus 110 ~~~~~-~---------------------~e~~~~----------~~~~Y~~sK~~~e~~~~-~~~~i~~~ilrp~~v~g~ 156 (219)
T 3dqp_A 110 LQPEK-W---------------------IGAGFD----------ALKDYYIAKHFADLYLT-KETNLDYTIIQPGALTEE 156 (219)
T ss_dssp TCGGG-C---------------------CSHHHH----------HTHHHHHHHHHHHHHHH-HSCCCEEEEEEECSEECS
T ss_pred cCCCc-c---------------------cccccc----------cccHHHHHHHHHHHHHH-hccCCcEEEEeCceEecC
Confidence 76321 1 110000 23579999999999997 237999999999999997
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPP 516 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (596)
...+ .+. . +....+|++++|+|++++.++..... .++
T Consensus 157 ~~~~---------------------~~~--~--~~~~~~~i~~~Dva~~i~~~l~~~~~------------------~g~ 193 (219)
T 3dqp_A 157 EATG---------------------LID--I--NDEVSASNTIGDVADTIKELVMTDHS------------------IGK 193 (219)
T ss_dssp CCCS---------------------EEE--E--SSSCCCCEEHHHHHHHHHHHHTCGGG------------------TTE
T ss_pred CCCC---------------------ccc--c--CCCcCCcccHHHHHHHHHHHHhCccc------------------cCc
Confidence 4311 010 1 25678999999999999999976432 478
Q ss_pred eEEccCCCCCcccHHHHHHH
Q psy5825 517 VYNLSISSSYPITWLEYMNS 536 (596)
Q Consensus 517 vyni~~~~~~~vt~~el~~~ 536 (596)
+||++++ ..++.|++..
T Consensus 194 ~~~i~~g---~~~~~e~~~~ 210 (219)
T 3dqp_A 194 VISMHNG---KTAIKEALES 210 (219)
T ss_dssp EEEEEEC---SEEHHHHHHT
T ss_pred EEEeCCC---CccHHHHHHH
Confidence 9999887 3888888764
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=99.77 E-value=1.3e-18 Score=171.72 Aligned_cols=171 Identities=12% Similarity=0.133 Sum_probs=131.0
Q ss_pred CcE-EEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 277 RKV-HIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 277 ~rv-~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
.++ .++.||++ .. +..++.++|+||||||.... ..+..++.+|+.|+.+|+++|.. .++++|||+||.+
T Consensus 64 ~~~~~~~~~Dl~-~~-------~~~~~~~~D~vi~~ag~~~~-~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS~~ 133 (236)
T 3e8x_A 64 RGASDIVVANLE-ED-------FSHAFASIDAVVFAAGSGPH-TGADKTILIDLWGAIKTIQEAEK-RGIKRFIMVSSVG 133 (236)
T ss_dssp TTCSEEEECCTT-SC-------CGGGGTTCSEEEECCCCCTT-SCHHHHHHTTTHHHHHHHHHHHH-HTCCEEEEECCTT
T ss_pred CCCceEEEcccH-HH-------HHHHHcCCCEEEECCCCCCC-CCccccchhhHHHHHHHHHHHHH-cCCCEEEEEecCC
Confidence 478 99999999 22 45677899999999998653 45677899999999999999988 4789999999965
Q ss_pred cccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCcccc
Q psy5825 356 THSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVS 435 (596)
Q Consensus 356 v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G 435 (596)
++.. +. .+ . ..+.|+.+|+.+|.+++. .|++++++|||.|+|
T Consensus 134 ~~~~-----~~--------------------------~~----~-~~~~Y~~sK~~~e~~~~~--~gi~~~~lrpg~v~~ 175 (236)
T 3e8x_A 134 TVDP-----DQ--------------------------GP----M-NMRHYLVAKRLADDELKR--SSLDYTIVRPGPLSN 175 (236)
T ss_dssp CSCG-----GG--------------------------SC----G-GGHHHHHHHHHHHHHHHH--SSSEEEEEEECSEEC
T ss_pred CCCC-----CC--------------------------Ch----h-hhhhHHHHHHHHHHHHHH--CCCCEEEEeCCcccC
Confidence 4431 00 00 0 235699999999999874 699999999999999
Q ss_pred CCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCC
Q psy5825 436 TWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDP 515 (596)
Q Consensus 436 ~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (596)
+...+ .+ ..........++++++|+|++++.++..... .+
T Consensus 176 ~~~~~---------------------~~-~~~~~~~~~~~~i~~~Dva~~~~~~~~~~~~------------------~g 215 (236)
T 3e8x_A 176 EESTG---------------------KV-TVSPHFSEITRSITRHDVAKVIAELVDQQHT------------------IG 215 (236)
T ss_dssp SCCCS---------------------EE-EEESSCSCCCCCEEHHHHHHHHHHHTTCGGG------------------TT
T ss_pred CCCCC---------------------eE-EeccCCCcccCcEeHHHHHHHHHHHhcCccc------------------cC
Confidence 74311 11 1122344568999999999999999876432 47
Q ss_pred CeEEccCCCCCcccHHHHHHHHH
Q psy5825 516 PVYNLSISSSYPITWLEYMNSVQ 538 (596)
Q Consensus 516 ~vyni~~~~~~~vt~~el~~~l~ 538 (596)
++||++++ .++|.++++.|.
T Consensus 216 ~~~~v~~~---~~~~~e~~~~i~ 235 (236)
T 3e8x_A 216 KTFEVLNG---DTPIAKVVEQLG 235 (236)
T ss_dssp EEEEEEEC---SEEHHHHHHTC-
T ss_pred CeEEEeCC---CcCHHHHHHHhc
Confidence 89999987 489999988764
|
| >3ay3_A NAD-dependent epimerase/dehydratase; glucuronic acid dehydrogeanse, oxidoreductase; 2.10A {Chromohalobacter salexigens} | Back alignment and structure |
|---|
Probab=99.77 E-value=1e-18 Score=175.81 Aligned_cols=172 Identities=16% Similarity=0.180 Sum_probs=132.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.+|++++ +.+..+++++|+||||||... ...+..++.+|+.|+.+|+++|.. .++++|||+||.++
T Consensus 42 ~~~~~~~~Dl~d~------~~~~~~~~~~d~vi~~a~~~~-~~~~~~~~~~n~~~~~~l~~a~~~-~~~~~iv~~SS~~~ 113 (267)
T 3ay3_A 42 AHEEIVACDLADA------QAVHDLVKDCDGIIHLGGVSV-ERPWNDILQANIIGAYNLYEAARN-LGKPRIVFASSNHT 113 (267)
T ss_dssp TTEEECCCCTTCH------HHHHHHHTTCSEEEECCSCCS-CCCHHHHHHHTHHHHHHHHHHHHH-TTCCEEEEEEEGGG
T ss_pred CCccEEEccCCCH------HHHHHHHcCCCEEEECCcCCC-CCCHHHHHHHHHHHHHHHHHHHHH-hCCCEEEEeCCHHH
Confidence 3578899999864 458888999999999999863 345667899999999999999998 57899999999999
Q ss_pred ccCCc---cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCC
Q psy5825 357 HSYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPS 431 (596)
Q Consensus 357 ~g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~ 431 (596)
|+... .+.|+. |. . ..+.|+.||+.+|.+++.+. .|++++|+||+
T Consensus 114 ~~~~~~~~~~~E~~--------------------------~~---~-~~~~Y~~sK~~~e~~~~~~~~~~gi~~~~lrp~ 163 (267)
T 3ay3_A 114 IGYYPRTTRIDTEV--------------------------PR---R-PDSLYGLSKCFGEDLASLYYHKFDIETLNIRIG 163 (267)
T ss_dssp STTSBTTSCBCTTS--------------------------CC---C-CCSHHHHHHHHHHHHHHHHHHTTCCCEEEEEEC
T ss_pred hCCCCCCCCCCCCC--------------------------CC---C-CCChHHHHHHHHHHHHHHHHHHcCCCEEEEece
Confidence 98532 222211 10 1 23679999999999998876 79999999999
Q ss_pred ccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCC
Q psy5825 432 IVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIP 511 (596)
Q Consensus 432 ~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~ 511 (596)
+||+. ++ ++....+|++++|+|++++.++....
T Consensus 164 ~v~~~-----~~-------------------------~~~~~~~~~~~~dva~~~~~~~~~~~----------------- 196 (267)
T 3ay3_A 164 SCFPK-----PK-------------------------DARMMATWLSVDDFMRLMKRAFVAPK----------------- 196 (267)
T ss_dssp BCSSS-----CC-------------------------SHHHHHHBCCHHHHHHHHHHHHHSSC-----------------
T ss_pred eecCC-----CC-------------------------CCCeeeccccHHHHHHHHHHHHhCCC-----------------
Confidence 99852 10 01124578999999999999886532
Q ss_pred CCCCCeEEccCCCCCcccHHHHHHH
Q psy5825 512 RTDPPVYNLSISSSYPITWLEYMNS 536 (596)
Q Consensus 512 ~~~~~vyni~~~~~~~vt~~el~~~ 536 (596)
....+||+.++ ...+|.++...
T Consensus 197 -~~~~~~~~~~~--~~~~~~d~~~~ 218 (267)
T 3ay3_A 197 -LGCTVVYGASA--NTESWWDNDKS 218 (267)
T ss_dssp -CCEEEEEECCS--CSSCCBCCGGG
T ss_pred -CCceeEecCCC--ccccccCHHHH
Confidence 12468998887 67788777776
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=99.76 E-value=4.5e-18 Score=177.70 Aligned_cols=180 Identities=11% Similarity=0.018 Sum_probs=133.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTL 354 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~ 354 (596)
.++.++.|||++ .+.+..+++ ++|+||||||.. |+.++.+|+++|...+.+++||+ |
T Consensus 60 ~~v~~~~~Dl~d------~~~l~~~~~~~~~d~Vi~~a~~~------------n~~~~~~l~~aa~~~g~v~~~v~-S-- 118 (346)
T 3i6i_A 60 KGAIIVYGLINE------QEAMEKILKEHEIDIVVSTVGGE------------SILDQIALVKAMKAVGTIKRFLP-S-- 118 (346)
T ss_dssp TTCEEEECCTTC------HHHHHHHHHHTTCCEEEECCCGG------------GGGGHHHHHHHHHHHCCCSEEEC-S--
T ss_pred CCcEEEEeecCC------HHHHHHHHhhCCCCEEEECCchh------------hHHHHHHHHHHHHHcCCceEEee-c--
Confidence 679999999996 456889999 999999999973 89999999999998533999987 4
Q ss_pred ccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccc
Q psy5825 355 YTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVV 434 (596)
Q Consensus 355 ~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~ 434 (596)
+||.. ++|.. +. . ..++|+.+|+.+|+++.. .|++++|+|||+++
T Consensus 119 -~~g~~--~~e~~---~~--------------------------~-p~~~y~~sK~~~e~~l~~--~g~~~tivrpg~~~ 163 (346)
T 3i6i_A 119 -EFGHD--VNRAD---PV--------------------------E-PGLNMYREKRRVRQLVEE--SGIPFTYICCNSIA 163 (346)
T ss_dssp -CCSSC--TTTCC---CC--------------------------T-THHHHHHHHHHHHHHHHH--TTCCBEEEECCEES
T ss_pred -ccCCC--CCccC---cC--------------------------C-CcchHHHHHHHHHHHHHH--cCCCEEEEEecccc
Confidence 34421 11110 00 0 225699999999999987 58999999999999
Q ss_pred cCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCC
Q psy5825 435 STWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTD 514 (596)
Q Consensus 435 G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (596)
|.... ++. ........+....++++++..++||+++|+|++++.++..+.. .
T Consensus 164 g~~~~---~~~-------~~~~~~~~~~~~~~~g~g~~~~~~i~~~Dva~~~~~~l~~~~~------------------~ 215 (346)
T 3i6i_A 164 SWPYY---NNI-------HPSEVLPPTDFFQIYGDGNVKAYFVAGTDIGKFTMKTVDDVRT------------------L 215 (346)
T ss_dssp SCCCS---CC------------CCCCSSCEEEETTSCCCEEEECHHHHHHHHHHHTTCGGG------------------T
T ss_pred cccCc---ccc-------ccccccCCCceEEEccCCCceEEecCHHHHHHHHHHHHhCccc------------------c
Confidence 96431 111 1110111222345678889999999999999999999876532 4
Q ss_pred CCeEEccC-CCCCcccHHHHHHHHHHHcc
Q psy5825 515 PPVYNLSI-SSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 515 ~~vyni~~-~~~~~vt~~el~~~l~~~~~ 542 (596)
+++||+++ + +.+||.||++.+.+.++
T Consensus 216 ~~~~~i~g~~--~~~s~~e~~~~~~~~~g 242 (346)
T 3i6i_A 216 NKSVHFRPSC--NCLNINELASVWEKKIG 242 (346)
T ss_dssp TEEEECCCGG--GEECHHHHHHHHHHHHT
T ss_pred CeEEEEeCCC--CCCCHHHHHHHHHHHHC
Confidence 67899874 4 78999999999999988
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=99.72 E-value=2.5e-17 Score=168.34 Aligned_cols=183 Identities=14% Similarity=0.052 Sum_probs=135.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+++++.||++++ +.+..++.++|+|||||+..... ....|+.++.+|+++|.. .++++|||+||.++
T Consensus 51 ~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~-----~~~~~~~~~~~~~~aa~~-~gv~~iv~~S~~~~ 118 (299)
T 2wm3_A 51 QGAEVVQGDQDDQ------VIMELALNGAYATFIVTNYWESC-----SQEQEVKQGKLLADLARR-LGLHYVVYSGLENI 118 (299)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCHHHHT-----CHHHHHHHHHHHHHHHHH-HTCSEEEECCCCCH
T ss_pred CCCEEEEecCCCH------HHHHHHHhcCCEEEEeCCCCccc-----cchHHHHHHHHHHHHHHH-cCCCEEEEEcCccc
Confidence 5688999999964 45889999999999999853211 235789999999999998 57999999998877
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
++... +. +++.|+.+|+.+|++++.. |++++|+||+++||+
T Consensus 119 ~~~~~------------------------------------~~-~~~~y~~sK~~~e~~~~~~--gi~~~ilrp~~~~~~ 159 (299)
T 2wm3_A 119 KKLTA------------------------------------GR-LAAAHFDGKGEVEEYFRDI--GVPMTSVRLPCYFEN 159 (299)
T ss_dssp HHHTT------------------------------------TS-CCCHHHHHHHHHHHHHHHH--TCCEEEEECCEEGGG
T ss_pred cccCC------------------------------------Cc-ccCchhhHHHHHHHHHHHC--CCCEEEEeecHHhhh
Confidence 65210 00 2367999999999999764 899999999999996
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEe-ecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTF-YAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDP 515 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~-~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (596)
... .+... ....|....+ .+.++..++||+++|+|++++.++..+.. ..+
T Consensus 160 ~~~---~~~~~---------~~~~g~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~-----------------~~g 210 (299)
T 2wm3_A 160 LLS---HFLPQ---------KAPDGKSYLLSLPTGDVPMDGMSVSDLGPVVLSLLKMPEK-----------------YVG 210 (299)
T ss_dssp GGT---TTCCE---------ECTTSSSEEECCCCTTSCEEEECGGGHHHHHHHHHHSHHH-----------------HTT
T ss_pred chh---hcCCc---------ccCCCCEEEEEecCCCCccceecHHHHHHHHHHHHcChhh-----------------hCC
Confidence 431 11100 0112211111 22367788999999999999999875421 136
Q ss_pred CeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 516 PVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 516 ~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
++||+++ ..+|+.|+++.+.+.++
T Consensus 211 ~~~~~~g---~~~s~~e~~~~~~~~~g 234 (299)
T 2wm3_A 211 QNIGLST---CRHTAEEYAALLTKHTR 234 (299)
T ss_dssp CEEECCS---EEECHHHHHHHHHHHHS
T ss_pred eEEEeee---ccCCHHHHHHHHHHHHC
Confidence 7999986 46999999999999888
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=99.71 E-value=4.2e-17 Score=159.06 Aligned_cols=178 Identities=8% Similarity=-0.081 Sum_probs=118.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+++++.||++++.. .++.++|+||||||...... ...+|+.|+.+|+++|.. .+ .+|||+||+++
T Consensus 43 ~~~~~~~~D~~d~~~--------~~~~~~d~vi~~ag~~~~~~----~~~~n~~~~~~l~~a~~~-~~-~~~v~~SS~~~ 108 (224)
T 3h2s_A 43 ATVATLVKEPLVLTE--------ADLDSVDAVVDALSVPWGSG----RGYLHLDFATHLVSLLRN-SD-TLAVFILGSAS 108 (224)
T ss_dssp TTSEEEECCGGGCCH--------HHHTTCSEEEECCCCCTTSS----CTHHHHHHHHHHHHTCTT-CC-CEEEEECCGGG
T ss_pred CCceEEecccccccH--------hhcccCCEEEECCccCCCcc----hhhHHHHHHHHHHHHHHH-cC-CcEEEEeccee
Confidence 578999999998763 56789999999999862111 246799999999999998 46 99999999876
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCEEEecCCcccc
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPLAMVRPSIVVS 435 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~~IlRp~~V~G 435 (596)
+..........+ ++ ...|. ..+.|+.+|+.+|.+..... .|++++|+||++|||
T Consensus 109 ~~~~~~~~~~~~----------------~~----~~~~~-----~~~~y~~sK~~~e~~~~~~~~~~i~~~ivrp~~v~g 163 (224)
T 3h2s_A 109 LAMPGADHPMIL----------------DF----PESAA-----SQPWYDGALYQYYEYQFLQMNANVNWIGISPSEAFP 163 (224)
T ss_dssp SBCTTCSSCGGG----------------GC----CGGGG-----GSTTHHHHHHHHHHHHHHTTCTTSCEEEEEECSBCC
T ss_pred eccCCCCccccc----------------cC----CCCCc-----cchhhHHHHHHHHHHHHHHhcCCCcEEEEcCccccC
Confidence 543221000000 00 00010 13569999999996533333 899999999999999
Q ss_pred CCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCC
Q psy5825 436 TWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDP 515 (596)
Q Consensus 436 ~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (596)
+.. ..++. .+. ..++ ......++|+++|||++++.++..+. ..+
T Consensus 164 ~~~--~~~~~--------------~~~-~~~~-~~~~~~~~i~~~DvA~~~~~~l~~~~------------------~~g 207 (224)
T 3h2s_A 164 SGP--ATSYV--------------AGK-DTLL-VGEDGQSHITTGNMALAILDQLEHPT------------------AIR 207 (224)
T ss_dssp CCC--CCCEE--------------EES-SBCC-CCTTSCCBCCHHHHHHHHHHHHHSCC------------------CTT
T ss_pred CCc--ccCce--------------ecc-cccc-cCCCCCceEeHHHHHHHHHHHhcCcc------------------ccC
Confidence 732 11110 011 1111 13445789999999999999997653 258
Q ss_pred CeEEccCCCCCcccHH
Q psy5825 516 PVYNLSISSSYPITWL 531 (596)
Q Consensus 516 ~vyni~~~~~~~vt~~ 531 (596)
++|++++. ....+.
T Consensus 208 ~~~~~~~~--~~~~~~ 221 (224)
T 3h2s_A 208 DRIVVRDA--DLEHHH 221 (224)
T ss_dssp SEEEEEEC--C-----
T ss_pred CEEEEecC--cchhcc
Confidence 89999987 444443
|
| >2a35_A Hypothetical protein PA4017; alpha-beta-alpha sandwich, structura genomics, PSI, protein structure initiative; 1.50A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.71 E-value=3.7e-18 Score=165.44 Aligned_cols=199 Identities=14% Similarity=0.034 Sum_probs=135.1
Q ss_pred EEeCCCCcccHHHHHHHHhhhhh----HHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCC
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDEL----FDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLR 316 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~~----~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~ 316 (596)
+||.+.++.-+..-+..++.... +-..+.... . ..++.++.+|++++.. +..++ +|+|||||+...
T Consensus 8 vlVtGatG~iG~~l~~~l~~~g~~~~V~~~~r~~~~-~-~~~~~~~~~D~~~~~~------~~~~~--~d~vi~~a~~~~ 77 (215)
T 2a35_A 8 VLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA-E-HPRLDNPVGPLAELLP------QLDGS--IDTAFCCLGTTI 77 (215)
T ss_dssp EEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC-C-CTTEECCBSCHHHHGG------GCCSC--CSEEEECCCCCH
T ss_pred EEEECCCcHHHHHHHHHHHhCCCCCeEEEEeCCCcc-c-CCCceEEeccccCHHH------HHHhh--hcEEEECeeecc
Confidence 45666666666655555554321 100010000 1 1468888899886432 44444 999999999865
Q ss_pred h-hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhh
Q psy5825 317 F-DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSM 395 (596)
Q Consensus 317 ~-~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~ 395 (596)
. ..+...++++|+.|+.+|+++|.. .++++|||+||.++|+.
T Consensus 78 ~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~~v~~Ss~~~~~~------------------------------------ 120 (215)
T 2a35_A 78 KEAGSEEAFRAVDFDLPLAVGKRALE-MGARHYLVVSALGADAK------------------------------------ 120 (215)
T ss_dssp HHHSSHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECCTTCCTT------------------------------------
T ss_pred ccCCCHHHHHHhhHHHHHHHHHHHHH-cCCCEEEEECCcccCCC------------------------------------
Confidence 3 245667889999999999999998 57899999999998763
Q ss_pred hcCCCCCchHHHHHHHHHHHHHHHhcCCC-EEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCcc
Q psy5825 396 LFGGIYNNSYSFTKAIGESVVEKYLYKLP-LAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKC 474 (596)
Q Consensus 396 ~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~-~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~ 474 (596)
..+.|+.+|+.+|++++.+ |++ ++|+||+.|||+...+ .+... +. +....+ + ...+
T Consensus 121 -----~~~~y~~sK~~~e~~~~~~--~~~~~~~vrp~~v~g~~~~~--~~~~~----------~~-~~~~~~-~--~~~~ 177 (215)
T 2a35_A 121 -----SSIFYNRVKGELEQALQEQ--GWPQLTIARPSLLFGPREEF--RLAEI----------LA-APIARI-L--PGKY 177 (215)
T ss_dssp -----CSSHHHHHHHHHHHHHTTS--CCSEEEEEECCSEESTTSCE--EGGGG----------TT-CCCC-------CHH
T ss_pred -----CccHHHHHHHHHHHHHHHc--CCCeEEEEeCceeeCCCCcc--hHHHH----------HH-Hhhhhc-c--CCCc
Confidence 1256999999999998764 899 9999999999985431 11110 01 111111 1 1267
Q ss_pred ccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHH
Q psy5825 475 DLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWL 531 (596)
Q Consensus 475 d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~ 531 (596)
++++++|+|++++.++... .+++||++++ +.++|.
T Consensus 178 ~~i~~~Dva~~~~~~~~~~--------------------~~~~~~i~~~--~~~~~~ 212 (215)
T 2a35_A 178 HGIEACDLARALWRLALEE--------------------GKGVRFVESD--ELRKLG 212 (215)
T ss_dssp HHHHHHHHHHHHHHHHTCC--------------------CSEEEEEEHH--HHHHHH
T ss_pred CcEeHHHHHHHHHHHHhcC--------------------CCCceEEcHH--HHHHhh
Confidence 9999999999999998642 3679999987 555543
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=99.70 E-value=2e-17 Score=163.92 Aligned_cols=187 Identities=10% Similarity=0.092 Sum_probs=134.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhh----------------hHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDE----------------LIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~----------------~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++ +.+..+++++|+||||||...... ....++.+|+.|+.+|+++|.
T Consensus 48 ~~~~~~~~D~~d~------~~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~ 121 (253)
T 1xq6_A 48 GEADVFIGDITDA------DSINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 121 (253)
T ss_dssp CCTTEEECCTTSH------HHHHHHHTTCSEEEECCCCCCEECTTCCTTSSCCCCEECCTTCSHHHHTTHHHHHHHHHHH
T ss_pred CCeeEEEecCCCH------HHHHHHHcCCCEEEEeccccccccccccccccccchhhccccccceeeeHHHHHHHHHHHH
Confidence 5678899999864 458889999999999999764211 112367899999999999999
Q ss_pred hcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 341 RCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 341 ~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
. .++++|||+||.+++...... .+ . ....|+.+|+.+|.+++.
T Consensus 122 ~-~~~~~iv~~SS~~~~~~~~~~-----------------------------~~--~---~~~~y~~sK~~~e~~~~~-- 164 (253)
T 1xq6_A 122 V-AGVKHIVVVGSMGGTNPDHPL-----------------------------NK--L---GNGNILVWKRKAEQYLAD-- 164 (253)
T ss_dssp H-HTCSEEEEEEETTTTCTTCGG-----------------------------GG--G---GGCCHHHHHHHHHHHHHT--
T ss_pred H-cCCCEEEEEcCccCCCCCCcc-----------------------------cc--c---cchhHHHHHHHHHHHHHh--
Confidence 8 478999999999875321100 00 0 113599999999999865
Q ss_pred cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCC
Q psy5825 421 YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHV 500 (596)
Q Consensus 421 ~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~ 500 (596)
.|++++++||+.|||+... +.. +..+....+++ ...++++++|+|++++.++.....
T Consensus 165 ~~i~~~~vrpg~v~~~~~~----~~~-----------~~~~~~~~~~~---~~~~~~~~~Dva~~~~~~~~~~~~----- 221 (253)
T 1xq6_A 165 SGTPYTIIRAGGLLDKEGG----VRE-----------LLVGKDDELLQ---TDTKTVPRADVAEVCIQALLFEEA----- 221 (253)
T ss_dssp SSSCEEEEEECEEECSCSS----SSC-----------EEEESTTGGGG---SSCCEEEHHHHHHHHHHHTTCGGG-----
T ss_pred CCCceEEEecceeecCCcc----hhh-----------hhccCCcCCcC---CCCcEEcHHHHHHHHHHHHcCccc-----
Confidence 6899999999999997531 100 00011111111 135699999999999998865422
Q ss_pred CCCCCcCCCCCCCCCCeEEccCCCC-CcccHHHHHHHHHHHcc
Q psy5825 501 APPASLVAPIPRTDPPVYNLSISSS-YPITWLEYMNSVQAAGK 542 (596)
Q Consensus 501 ~~~~~~~~~~~~~~~~vyni~~~~~-~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++.. .++++.||++.+.+.++
T Consensus 222 -------------~g~~~~i~~~~~~~~~s~~e~~~~~~~~~g 251 (253)
T 1xq6_A 222 -------------KNKAFDLGSKPEGTSTPTKDFKALFSQVTS 251 (253)
T ss_dssp -------------TTEEEEEEECCTTTSCCCCCHHHHHHTCCC
T ss_pred -------------cCCEEEecCCCcCCCCCHHHHHHHHHHHhC
Confidence 467999998621 46999999999998776
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=99.69 E-value=9.2e-17 Score=168.52 Aligned_cols=179 Identities=12% Similarity=0.003 Sum_probs=131.5
Q ss_pred CcEEEEEec-cCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEecCc
Q psy5825 277 RKVHIISGD-ISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQ-LKAILHVSTL 354 (596)
Q Consensus 277 ~rv~~v~GD-l~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~-vkrfV~vSS~ 354 (596)
.++.++.|| ++++ +.+..++.++|+|||+|+.... ..|+.+ .+|+++|... + +++|||+||.
T Consensus 51 ~~v~~v~~D~l~d~------~~l~~~~~~~d~Vi~~a~~~~~--------~~~~~~-~~l~~aa~~~-g~v~~~V~~SS~ 114 (352)
T 1xgk_A 51 PNVTLFQGPLLNNV------PLMDTLFEGAHLAFINTTSQAG--------DEIAIG-KDLADAAKRA-GTIQHYIYSSMP 114 (352)
T ss_dssp TTEEEEESCCTTCH------HHHHHHHTTCSEEEECCCSTTS--------CHHHHH-HHHHHHHHHH-SCCSEEEEEECC
T ss_pred CCcEEEECCccCCH------HHHHHHHhcCCEEEEcCCCCCc--------HHHHHH-HHHHHHHHHc-CCccEEEEeCCc
Confidence 368999999 9854 4588889999999999986421 347777 9999999984 6 8999999998
Q ss_pred cc--ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCc
Q psy5825 355 YT--HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSI 432 (596)
Q Consensus 355 ~v--~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~ 432 (596)
++ |+. . .++.|+.||+.+|++++.. |++++|+||+
T Consensus 115 ~~~~~~~---------------------------------------~-~~~~y~~sK~~~E~~~~~~--gi~~~ivrpg- 151 (352)
T 1xgk_A 115 DHSLYGP---------------------------------------W-PAVPMWAPKFTVENYVRQL--GLPSTFVYAG- 151 (352)
T ss_dssp CGGGTSS---------------------------------------C-CCCTTTHHHHHHHHHHHTS--SSCEEEEEEC-
T ss_pred cccccCC---------------------------------------C-CCccHHHHHHHHHHHHHHc--CCCEEEEecc-
Confidence 63 221 0 2356999999999999774 8999999987
Q ss_pred cccCCCCCccccCCCCCCcHHHHH-H-HHhccce-EeecCCCCccccccH-HHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 433 VVSTWKEPIVGWSNNLYGPGGAAA-G-AALGLIH-TFYAKHDKKCDLIPV-DVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 433 V~G~~~~p~~G~~~~~~~~~~l~~-~-~~~g~~~-~~~~~~~~~~d~ipV-Ddva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
+||+... + .+. .++. . ...|.+. .++++++..++||+| +|+|++++.++......
T Consensus 152 ~~g~~~~---~---~~~---~~~~~~~~~~g~~~~~~~~~~~~~~~~i~v~~Dva~ai~~~l~~~~~~------------ 210 (352)
T 1xgk_A 152 IYNNNFT---S---LPY---PLFQMELMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK------------ 210 (352)
T ss_dssp EEGGGCB---S---SSC---SSCBEEECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH------------
T ss_pred eecCCch---h---ccc---ccccccccCCCceEEeeccCCCCceeeEecHHHHHHHHHHHHhCCchh------------
Confidence 5776431 1 100 0110 0 1123321 346667888999999 99999999998763210
Q ss_pred CCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 509 PIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||+++ ..+|+.||++.|.+.++
T Consensus 211 ----~~g~~~~l~~---~~~s~~e~~~~i~~~~G 237 (352)
T 1xgk_A 211 ----WNGHRIALTF---ETLSPVQVCAAFSRALN 237 (352)
T ss_dssp ----HTTCEEEECS---EEECHHHHHHHHHHHHT
T ss_pred ----hCCeEEEEec---CCCCHHHHHHHHHHHHC
Confidence 1478999995 46999999999999888
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=99.68 E-value=1.2e-16 Score=157.87 Aligned_cols=154 Identities=18% Similarity=0.135 Sum_probs=115.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.+|++++. .+..+++++|+||||||..........++.+|+.|+.+|+++|.. .++.+|||+||+++
T Consensus 63 ~~~~~~~~D~~d~~------~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~-~~~~~iv~~SS~~~ 135 (242)
T 2bka_A 63 KNVNQEVVDFEKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKA-GGCKHFNLLSSKGA 135 (242)
T ss_dssp GGCEEEECCGGGGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECCTTC
T ss_pred CCceEEecCcCCHH------HHHHHhcCCCEEEECCCcccccCCcccceeeeHHHHHHHHHHHHH-CCCCEEEEEccCcC
Confidence 36889999999764 377788899999999998765555677899999999999999988 57889999999988
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCC-CEEEecCCcccc
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKL-PLAMVRPSIVVS 435 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl-~~~IlRp~~V~G 435 (596)
|+. ..+.|+.+|+.+|.+++.+ ++ +++++|||.|||
T Consensus 136 ~~~-----------------------------------------~~~~Y~~sK~~~e~~~~~~--~~~~~~~vrpg~v~~ 172 (242)
T 2bka_A 136 DKS-----------------------------------------SNFLYLQVKGEVEAKVEEL--KFDRYSVFRPGVLLC 172 (242)
T ss_dssp CTT-----------------------------------------CSSHHHHHHHHHHHHHHTT--CCSEEEEEECCEEEC
T ss_pred CCC-----------------------------------------CcchHHHHHHHHHHHHHhc--CCCCeEEEcCceecC
Confidence 762 1246999999999998765 67 599999999999
Q ss_pred CCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 436 TWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 436 ~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+...+ .....+.....+.++..+ ....+++++|+|++++.++...
T Consensus 173 ~~~~~---------~~~~~~~~~~~~~~~~~~----~~~~~~~~~dva~~~~~~~~~~ 217 (242)
T 2bka_A 173 DRQES---------RPGEWLVRKFFGSLPDSW----ASGHSVPVVTVVRAMLNNVVRP 217 (242)
T ss_dssp TTGGG---------SHHHHHHHHHHCSCCTTG----GGGTEEEHHHHHHHHHHHHTSC
T ss_pred CCCCC---------cHHHHHHHHhhcccCccc----cCCcccCHHHHHHHHHHHHhCc
Confidence 74311 111222221212221111 1235899999999999998653
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=99.67 E-value=2.5e-16 Score=153.03 Aligned_cols=177 Identities=11% Similarity=0.059 Sum_probs=108.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.||++++.. .++.++|+|||||+.... ...+|+.++.+|+++|.. .++.+|||+||+++
T Consensus 42 ~~~~~~~~D~~d~~~--------~~~~~~d~vi~~ag~~~~------~~~~~~~~~~~l~~a~~~-~~~~~~v~~SS~~~ 106 (221)
T 3ew7_A 42 KDINILQKDIFDLTL--------SDLSDQNVVVDAYGISPD------EAEKHVTSLDHLISVLNG-TVSPRLLVVGGAAS 106 (221)
T ss_dssp SSSEEEECCGGGCCH--------HHHTTCSEEEECCCSSTT------TTTSHHHHHHHHHHHHCS-CCSSEEEEECCCC-
T ss_pred CCCeEEeccccChhh--------hhhcCCCEEEECCcCCcc------ccchHHHHHHHHHHHHHh-cCCceEEEEecceE
Confidence 578999999998753 567899999999998532 245699999999999998 47899999999877
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH--hcCCCEEEecCCccc
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY--LYKLPLAMVRPSIVV 434 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~--~~gl~~~IlRp~~V~ 434 (596)
+.....- . +. .+. .+.. ..+.|+.+|+.+|.+.... ..|++++|+||++||
T Consensus 107 ~~~~~~~---~---~~------------~~~-----~~~~----~~~~y~~~k~~~e~~~~~~~~~~gi~~~ivrp~~v~ 159 (221)
T 3ew7_A 107 LQIDEDG---N---TL------------LES-----KGLR----EAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMF 159 (221)
T ss_dssp ---------------------------------------------CCCSCCHHHHHHHHHHHHTTTTTSCEEEEECSSCC
T ss_pred EEcCCCC---c---cc------------ccc-----CCCC----CHHHHHHHHHHHHHHHHHHhhccCccEEEEeCccee
Confidence 5432100 0 00 000 0100 2256999999999984333 378999999999999
Q ss_pred cCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCC
Q psy5825 435 STWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTD 514 (596)
Q Consensus 435 G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (596)
|+.. ..+ . + ... +....+++++ .++|+++|||++++.++..+. ..
T Consensus 160 g~~~--~~~---~------~--~~~-~~~~~~~~~~---~~~i~~~Dva~~~~~~l~~~~------------------~~ 204 (221)
T 3ew7_A 160 EPGE--RTG---D------Y--QIG-KDHLLFGSDG---NSFISMEDYAIAVLDEIERPN------------------HL 204 (221)
T ss_dssp CCC--------------------------------------CCCHHHHHHHHHHHHHSCS------------------CT
T ss_pred cCCC--ccC---c------e--Eec-cccceecCCC---CceEeHHHHHHHHHHHHhCcc------------------cc
Confidence 9721 111 0 0 011 1111122222 369999999999999997653 25
Q ss_pred CCeEEccCCCCCcccHHH
Q psy5825 515 PPVYNLSISSSYPITWLE 532 (596)
Q Consensus 515 ~~vyni~~~~~~~vt~~e 532 (596)
+++||++++ .+.+..|
T Consensus 205 g~~~~~~~~--~~~~~~~ 220 (221)
T 3ew7_A 205 NEHFTVAGK--LEHHHHH 220 (221)
T ss_dssp TSEEECCC----------
T ss_pred CCEEEECCC--Ccccccc
Confidence 889999998 6555443
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.62 E-value=2.5e-15 Score=154.08 Aligned_cols=185 Identities=12% Similarity=0.092 Sum_probs=129.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCC-CceEEEecCcc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQ-LKAILHVSTLY 355 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~-vkrfV~vSS~~ 355 (596)
.+++++.||++++ +.+..+++++|+|||||+..... .|+.++.+|+++|.. .+ +++||| |
T Consensus 55 ~~~~~~~~D~~d~------~~l~~~~~~~d~vi~~a~~~~~~--------~~~~~~~~l~~aa~~-~g~v~~~v~-S--- 115 (313)
T 1qyd_A 55 LGAKLIEASLDDH------QRLVDALKQVDVVISALAGGVLS--------HHILEQLKLVEAIKE-AGNIKRFLP-S--- 115 (313)
T ss_dssp TTCEEECCCSSCH------HHHHHHHTTCSEEEECCCCSSSS--------TTTTTHHHHHHHHHH-SCCCSEEEC-S---
T ss_pred CCeEEEeCCCCCH------HHHHHHHhCCCEEEECCccccch--------hhHHHHHHHHHHHHh-cCCCceEEe-c---
Confidence 5789999999965 45889999999999999986532 378899999999998 45 999996 3
Q ss_pred cccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCcccc
Q psy5825 356 THSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVS 435 (596)
Q Consensus 356 v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G 435 (596)
+||......+ .+. .. ..+.| .+|+.+|+++.. .|++++|+||+.++|
T Consensus 116 ~~g~~~~~~~----~~~-------------------------~p-~~~~y-~sK~~~e~~~~~--~g~~~~ilrp~~~~~ 162 (313)
T 1qyd_A 116 EFGMDPDIME----HAL-------------------------QP-GSITF-IDKRKVRRAIEA--ASIPYTYVSSNMFAG 162 (313)
T ss_dssp CCSSCTTSCC----CCC-------------------------SS-TTHHH-HHHHHHHHHHHH--TTCCBCEEECCEEHH
T ss_pred CCcCCccccc----cCC-------------------------CC-CcchH-HHHHHHHHHHHh--cCCCeEEEEeceecc
Confidence 3442110000 000 00 12458 999999999975 489999999999988
Q ss_pred CCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCC
Q psy5825 436 TWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDP 515 (596)
Q Consensus 436 ~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 515 (596)
...... ... .. .....+....++++++..++|++++|+|++++.++..+.. .+
T Consensus 163 ~~~~~~---~~~----~~--~~~~~~~~~~~~~~g~~~~~~i~~~Dva~~~~~~l~~~~~------------------~~ 215 (313)
T 1qyd_A 163 YFAGSL---AQL----DG--HMMPPRDKVLIYGDGNVKGIWVDEDDVGTYTIKSIDDPQT------------------LN 215 (313)
T ss_dssp HHTTTS---SCT----TC--CSSCCSSEECCBTTSCSEEEEECHHHHHHHHHHHTTCGGG------------------SS
T ss_pred cccccc---ccc----cc--cccCCCCeEEEeCCCCceEEEEEHHHHHHHHHHHHhCccc------------------CC
Confidence 532111 000 00 0001111123456778899999999999999998865432 35
Q ss_pred CeEEccC-CCCCcccHHHHHHHHHHHcc
Q psy5825 516 PVYNLSI-SSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 516 ~vyni~~-~~~~~vt~~el~~~l~~~~~ 542 (596)
++|++++ + +.+|+.|+++.+.+.++
T Consensus 216 ~~~~~~g~~--~~~s~~e~~~~~~~~~g 241 (313)
T 1qyd_A 216 KTMYIRPPM--NILSQKEVIQIWERLSE 241 (313)
T ss_dssp SEEECCCGG--GEEEHHHHHHHHHHHHT
T ss_pred ceEEEeCCC--CccCHHHHHHHHHHhcC
Confidence 6777764 4 68999999999999888
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=99.61 E-value=1e-15 Score=152.07 Aligned_cols=188 Identities=12% Similarity=0.003 Sum_probs=118.7
Q ss_pred HHHHHhc----cccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhc---CCCceEEEecCcccccCCccccccccC
Q psy5825 297 DQQFIQH----HIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYP 369 (596)
Q Consensus 297 ~~~~l~~----~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~ 369 (596)
.+..+++ ++|+||||||......++..++.+|+.|+.+|+++|... .+..+|||+||.++++......
T Consensus 51 ~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~~~~~~~~~----- 125 (255)
T 2dkn_A 51 AVAAVLDRCGGVLDGLVCCAGVGVTAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAATQPGAAEL----- 125 (255)
T ss_dssp HHHHHHHHHTTCCSEEEECCCCCTTSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSTTGGGC-----
T ss_pred HHHHHHHHcCCCccEEEECCCCCCcchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccccccccccc-----
Confidence 4566665 799999999987645667889999999999999988752 3468999999999987532000
Q ss_pred CCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCcccc
Q psy5825 370 PLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGW 444 (596)
Q Consensus 370 ~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~ 444 (596)
+ .. ......++.......... .. ..+.|+.||+++|.+++.++ .|++++++|||.|+|+...
T Consensus 126 -~--~~---~~~~~~~~~~~~~~~~~~-~~-~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~v~~v~pg~v~~~~~~----- 192 (255)
T 2dkn_A 126 -P--MV---EAMLAGDEARAIELAEQQ-GQ-THLAYAGSKYAVTCLARRNVVDWAGRGVRLNVVAPGAVETPLLQ----- 192 (255)
T ss_dssp -H--HH---HHHHHTCHHHHHHHHHHH-CC-HHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECCBCSHHHH-----
T ss_pred -c--hh---hhhcccchhhhhhhcccc-CC-cchhHHHHHHHHHHHHHHHHHHHhhcCcEEEEEcCCcccchhhh-----
Confidence 0 00 000011111111100000 01 22579999999999998765 5899999999999886321
Q ss_pred CCCCCCcHHHHHHHHhcc-ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 445 SNNLYGPGGAAAGAALGL-IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 445 ~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.++.....+. ...+ . + ...++++++|+|++++.++...... ..|++||++++
T Consensus 193 --------~~~~~~~~~~~~~~~-~-~-~~~~~~~~~dva~~~~~l~~~~~~~----------------~~G~~~~v~gg 245 (255)
T 2dkn_A 193 --------ASKADPRYGESTRRF-V-A-PLGRGSEPREVAEAIAFLLGPQASF----------------IHGSVLFVDGG 245 (255)
T ss_dssp --------HHHHCTTTHHHHHSC-C-C-TTSSCBCHHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred --------hcccchhhHHHHHHH-H-H-HhcCCCCHHHHHHHHHHHhCCCccc----------------ceeeEEEecCC
Confidence 0000000000 0001 0 1 3457999999999999998654221 25889999998
Q ss_pred CCCcccHH
Q psy5825 524 SSYPITWL 531 (596)
Q Consensus 524 ~~~~vt~~ 531 (596)
..+++.
T Consensus 246 --~~~~~~ 251 (255)
T 2dkn_A 246 --MDALMR 251 (255)
T ss_dssp --HHHHHC
T ss_pred --eEeeee
Confidence 555543
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=2.6e-15 Score=143.99 Aligned_cols=159 Identities=13% Similarity=0.079 Sum_probs=115.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.+|++++ +.+..+++++|+|||||+...... ...+|+.++.+|+++|.. .++++|||+||.++
T Consensus 46 ~~~~~~~~D~~~~------~~~~~~~~~~d~vi~~a~~~~~~~----~~~~n~~~~~~~~~~~~~-~~~~~~v~~Ss~~~ 114 (206)
T 1hdo_A 46 RPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRNDLS----PTTVMSEGARNIVAAMKA-HGVDKVVACTSAFL 114 (206)
T ss_dssp CCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTTCCS----CCCHHHHHHHHHHHHHHH-HTCCEEEEECCGGG
T ss_pred CceEEEEecCCCH------HHHHHHHcCCCEEEECccCCCCCC----ccchHHHHHHHHHHHHHH-hCCCeEEEEeeeee
Confidence 5789999999864 458888999999999999765421 235899999999999998 47899999999999
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
|+..... + . ..+.|+.+|+.+|+++.. .+++++|+||+.+++.
T Consensus 115 ~~~~~~~-----~-------------------------~-----~~~~y~~~K~~~e~~~~~--~~i~~~~lrp~~~~~~ 157 (206)
T 1hdo_A 115 LWDPTKV-----P-------------------------P-----RLQAVTDDHIRMHKVLRE--SGLKYVAVMPPHIGDQ 157 (206)
T ss_dssp TSCTTCS-----C-------------------------G-----GGHHHHHHHHHHHHHHHH--TCSEEEEECCSEEECC
T ss_pred ccCcccc-----c-------------------------c-----cchhHHHHHHHHHHHHHh--CCCCEEEEeCCcccCC
Confidence 8752210 0 0 114699999999999965 5899999999998322
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPP 516 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (596)
.. .++ +. ..+.+.+. .+|++++|+|++++.++..+. ..++
T Consensus 158 ~~---~~~---~~--------------~~~~~~~~--~~~i~~~Dva~~~~~~~~~~~------------------~~g~ 197 (206)
T 1hdo_A 158 PL---TGA---YT--------------VTLDGRGP--SRVISKHDLGHFMLRCLTTDE------------------YDGH 197 (206)
T ss_dssp CC---CSC---CE--------------EESSSCSS--CSEEEHHHHHHHHHHTTSCST------------------TTTC
T ss_pred CC---Ccc---eE--------------ecccCCCC--CCccCHHHHHHHHHHHhcCcc------------------cccc
Confidence 11 110 00 00111111 489999999999999886532 2578
Q ss_pred eEEccCC
Q psy5825 517 VYNLSIS 523 (596)
Q Consensus 517 vyni~~~ 523 (596)
+||++++
T Consensus 198 ~~~i~~g 204 (206)
T 1hdo_A 198 STYPSHQ 204 (206)
T ss_dssp EEEEECC
T ss_pred ceeeecc
Confidence 9999987
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=99.61 E-value=1.6e-14 Score=145.64 Aligned_cols=188 Identities=13% Similarity=0.151 Sum_probs=134.5
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh---------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD---------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~---------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
++.++.+|++++. .+..+++ ++|+|||+||..... ..+..++.+|+.|+.+|+++|..
T Consensus 65 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~ 138 (278)
T 2bgk_A 65 VISFVHCDVTKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAAR 138 (278)
T ss_dssp TEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 7999999999653 4666655 689999999975321 34566889999999999999876
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||.+++.... . ....|+.||++.|.++..
T Consensus 139 ~~~~~~~~~iv~isS~~~~~~~~-------------------------------------~-~~~~Y~~sK~a~~~~~~~ 180 (278)
T 2bgk_A 139 VMIPAKKGSIVFTASISSFTAGE-------------------------------------G-VSHVYTATKHAVLGLTTS 180 (278)
T ss_dssp HHGGGTCEEEEEECCGGGTCCCT-------------------------------------T-SCHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCeEEEEeeccccCCCC-------------------------------------C-CCcchHHHHHHHHHHHHH
Confidence 2 2567999999998875311 0 124699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|++++++|||.|+|+..... ......++..+..+ . ......+++++|+|++++.++...
T Consensus 181 la~e~~~~gi~v~~v~Pg~v~t~~~~~~------~~~~~~~~~~~~~~-~------~~~~~~~~~~~dva~~~~~l~~~~ 247 (278)
T 2bgk_A 181 LCTELGEYGIRVNCVSPYIVASPLLTDV------FGVDSSRVEELAHQ-A------ANLKGTLLRAEDVADAVAYLAGDE 247 (278)
T ss_dssp HHHHHGGGTEEEEEEEESCCSCCCCTTS------SSCCHHHHHHHHHH-T------CSSCSCCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHhhcCcEEEEEEeceecchhhhhh------cccchhHHHHhhhc-c------cccccccCCHHHHHHHHHHHcCcc
Confidence 75 589999999999999754211 11112222222211 1 112245899999999999988543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHH
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAA 540 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~ 540 (596)
... ..|++|++.++ ..+++.+|++.|.+.
T Consensus 248 ~~~----------------~~G~~~~v~gg--~~~~~~e~~~~i~~~ 276 (278)
T 2bgk_A 248 SKY----------------VSGLNLVIDGG--YTRTNPAFPTALKHG 276 (278)
T ss_dssp GTT----------------CCSCEEEESTT--GGGCCTHHHHHSCSC
T ss_pred ccc----------------CCCCEEEECCc--ccccCCccchhhhhh
Confidence 221 35889999998 889999999887643
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=99.57 E-value=5.3e-15 Score=152.42 Aligned_cols=177 Identities=14% Similarity=0.101 Sum_probs=126.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.||++++ +.+..+++++|+|||||+... +.++.+|+++|...+++++||+ | +
T Consensus 56 ~~v~~v~~D~~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S---~ 113 (321)
T 3c1o_A 56 MGVTIIEGEMEEH------EKMVSVLKQVDIVISALPFPM------------ISSQIHIINAIKAAGNIKRFLP-S---D 113 (321)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCCEEEC-S---C
T ss_pred CCcEEEEecCCCH------HHHHHHHcCCCEEEECCCccc------------hhhHHHHHHHHHHhCCccEEec-c---c
Confidence 5789999999965 458899999999999999643 6778999999998423899983 3 3
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
||... ++.. +. .| ..+.| .+|+.+|.++... |++++|+||+.++|.
T Consensus 114 ~g~~~--~~~~---~~--------------------~p------~~~~y-~sK~~~e~~~~~~--~~~~~~lrp~~~~~~ 159 (321)
T 3c1o_A 114 FGCEE--DRIK---PL--------------------PP------FESVL-EKKRIIRRAIEAA--ALPYTYVSANCFGAY 159 (321)
T ss_dssp CSSCG--GGCC---CC--------------------HH------HHHHH-HHHHHHHHHHHHH--TCCBEEEECCEEHHH
T ss_pred cccCc--cccc---cC--------------------CC------cchHH-HHHHHHHHHHHHc--CCCeEEEEeceeccc
Confidence 44211 1100 00 00 11359 9999999999764 899999999998774
Q ss_pred CCCCccccCCCCCCcHHHHH---HHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAA---GAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRT 513 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~---~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~ 513 (596)
.. ..++. ....+....++++++..++|++++|+|++++.++.....
T Consensus 160 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~------------------ 208 (321)
T 3c1o_A 160 FV-------------NYLLHPSPHPNRNDDIVIYGTGETKFVLNYEEDIAKYTIKVACDPRC------------------ 208 (321)
T ss_dssp HH-------------HHHHCCCSSCCTTSCEEEETTSCCEEEEECHHHHHHHHHHHHHCGGG------------------
T ss_pred cc-------------cccccccccccccCceEEecCCCcceeEeeHHHHHHHHHHHHhCccc------------------
Confidence 21 01100 001122234566778899999999999999999876432
Q ss_pred CCCeEEccC-CCCCcccHHHHHHHHHHHcc
Q psy5825 514 DPPVYNLSI-SSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 514 ~~~vyni~~-~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++|++++ + ..+|+.|+++.+.+.++
T Consensus 209 ~g~~~~~~g~~--~~~t~~e~~~~~~~~~g 236 (321)
T 3c1o_A 209 CNRIVIYRPPK--NIISQNELISLWEAKSG 236 (321)
T ss_dssp TTEEEECCCGG--GEEEHHHHHHHHHHHHT
T ss_pred cCeEEEEeCCC--CcccHHHHHHHHHHHcC
Confidence 366788764 4 68999999999999988
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=99.56 E-value=6.5e-15 Score=150.59 Aligned_cols=180 Identities=11% Similarity=0.054 Sum_probs=125.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+++++.||++++ +.+..+++++|+|||||+... +.++.+|+++|...+++++||+ | +
T Consensus 55 ~~v~~v~~D~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S---~ 112 (307)
T 2gas_A 55 LGVILLEGDINDH------ETLVKAIKQVDIVICAAGRLL------------IEDQVKIIKAIKEAGNVKKFFP-S---E 112 (307)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCSEEEECSSSSC------------GGGHHHHHHHHHHHCCCSEEEC-S---C
T ss_pred CCCEEEEeCCCCH------HHHHHHHhCCCEEEECCcccc------------cccHHHHHHHHHhcCCceEEee-c---c
Confidence 5688999999965 458899999999999999754 5678899999998433899984 3 3
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
||... ++.. +.. | ..+.| .+|+.+|+++... |++++|+||+.++|.
T Consensus 113 ~g~~~--~~~~---~~~--------------------p------~~~~y-~sK~~~e~~~~~~--~i~~~~lrp~~~~~~ 158 (307)
T 2gas_A 113 FGLDV--DRHD---AVE--------------------P------VRQVF-EEKASIRRVIEAE--GVPYTYLCCHAFTGY 158 (307)
T ss_dssp CSSCT--TSCC---CCT--------------------T------HHHHH-HHHHHHHHHHHHH--TCCBEEEECCEETTT
T ss_pred cccCc--cccc---CCC--------------------c------chhHH-HHHHHHHHHHHHc--CCCeEEEEcceeecc
Confidence 44211 1100 000 0 11359 9999999999764 899999999999885
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPP 516 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (596)
.. +++.... .....+....++++++..++|++++|+|++++.++..+.. .++
T Consensus 159 ~~---~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~------------------~~~ 210 (307)
T 2gas_A 159 FL---RNLAQLD-------ATDPPRDKVVILGDGNVKGAYVTEADVGTFTIRAANDPNT------------------LNK 210 (307)
T ss_dssp TG---GGTTCTT-------CSSCCSSEEEEETTSCSEEEEECHHHHHHHHHHHHTCGGG------------------TTE
T ss_pred cc---ccccccc-------cccCCCCeEEEecCCCcceEEeeHHHHHHHHHHHHcCccc------------------cCc
Confidence 32 1111000 0000111223567778889999999999999999865432 356
Q ss_pred eEEccC-CCCCcccHHHHHHHHHHHcc
Q psy5825 517 VYNLSI-SSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 517 vyni~~-~~~~~vt~~el~~~l~~~~~ 542 (596)
+|++++ + ..+|+.|+++.+.+.++
T Consensus 211 ~~~~~~~~--~~~s~~e~~~~~~~~~g 235 (307)
T 2gas_A 211 AVHIRLPK--NYLTQNEVIALWEKKIG 235 (307)
T ss_dssp EEECCCGG--GEEEHHHHHHHHHHHHT
T ss_pred eEEEeCCC--CcCCHHHHHHHHHHHhC
Confidence 777764 4 67999999999999988
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.56 E-value=4.2e-15 Score=152.10 Aligned_cols=180 Identities=11% Similarity=0.118 Sum_probs=126.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+++++.||++++ +.+..+++++|+|||||+... +.++.+|+++|...+++++||+ |+
T Consensus 56 ~~v~~v~~D~~d~------~~l~~~~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S~--- 113 (308)
T 1qyc_A 56 SGANIVHGSIDDH------ASLVEAVKNVDVVISTVGSLQ------------IESQVNIIKAIKEVGTVKRFFP-SE--- 113 (308)
T ss_dssp TTCEEECCCTTCH------HHHHHHHHTCSEEEECCCGGG------------SGGGHHHHHHHHHHCCCSEEEC-SC---
T ss_pred CCCEEEEeccCCH------HHHHHHHcCCCEEEECCcchh------------hhhHHHHHHHHHhcCCCceEee-cc---
Confidence 5789999999965 458889999999999999643 5678999999998433999985 43
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
||... .+.. +.. | ..+.| .+|+.+|+++... |++++|+||+.++|.
T Consensus 114 ~g~~~--~~~~---~~~--------------------p------~~~~y-~sK~~~e~~~~~~--~~~~~~~r~~~~~~~ 159 (308)
T 1qyc_A 114 FGNDV--DNVH---AVE--------------------P------AKSVF-EVKAKVRRAIEAE--GIPYTYVSSNCFAGY 159 (308)
T ss_dssp CSSCT--TSCC---CCT--------------------T------HHHHH-HHHHHHHHHHHHH--TCCBEEEECCEEHHH
T ss_pred cccCc--cccc---cCC--------------------c------chhHH-HHHHHHHHHHHhc--CCCeEEEEeceeccc
Confidence 44211 1100 000 0 11358 9999999999764 899999999999885
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPP 516 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (596)
.... +... + .....+....++++++..++|++++|+|++++.++..+.. .++
T Consensus 160 ~~~~---~~~~--~-----~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~------------------~~~ 211 (308)
T 1qyc_A 160 FLRS---LAQA--G-----LTAPPRDKVVILGDGNARVVFVKEEDIGTFTIKAVDDPRT------------------LNK 211 (308)
T ss_dssp HTTT---TTCT--T-----CSSCCSSEEEEETTSCCEEEEECHHHHHHHHHTTSSCGGG------------------TTE
T ss_pred cccc---cccc--c-----ccCCCCCceEEecCCCceEEEecHHHHHHHHHHHHhCccc------------------cCe
Confidence 3211 1100 0 0001112234567788899999999999999988765321 356
Q ss_pred eEEccC-CCCCcccHHHHHHHHHHHcc
Q psy5825 517 VYNLSI-SSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 517 vyni~~-~~~~~vt~~el~~~l~~~~~ 542 (596)
+|++++ + ..+|+.|+++.+.+.++
T Consensus 212 ~~~~~g~~--~~~s~~e~~~~~~~~~g 236 (308)
T 1qyc_A 212 TLYLRLPA--NTLSLNELVALWEKKID 236 (308)
T ss_dssp EEECCCGG--GEEEHHHHHHHHHHHTT
T ss_pred EEEEeCCC--CccCHHHHHHHHHHHhC
Confidence 788764 4 68999999999999988
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=99.55 E-value=6.1e-15 Score=151.86 Aligned_cols=177 Identities=15% Similarity=0.082 Sum_probs=124.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+++++.||++++ +.+..+++++|+|||||+... +.++.+|+++|...+++++||+ | +
T Consensus 58 ~~v~~v~~Dl~d~------~~l~~a~~~~d~vi~~a~~~~------------~~~~~~l~~aa~~~g~v~~~v~-S---~ 115 (318)
T 2r6j_A 58 LGAIIVKGELDEH------EKLVELMKKVDVVISALAFPQ------------ILDQFKILEAIKVAGNIKRFLP-S---D 115 (318)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCSEEEECCCGGG------------STTHHHHHHHHHHHCCCCEEEC-S---C
T ss_pred CCCEEEEecCCCH------HHHHHHHcCCCEEEECCchhh------------hHHHHHHHHHHHhcCCCCEEEe-e---c
Confidence 5689999999964 458899999999999998642 5678999999998433899985 4 3
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
||... ++.. +. .| ..+.| .+|+.+|+++.. .|++++|+||+.+++.
T Consensus 116 ~g~~~--~~~~---~~--------------------~p------~~~~y-~sK~~~e~~~~~--~~~~~~~lr~~~~~~~ 161 (318)
T 2r6j_A 116 FGVEE--DRIN---AL--------------------PP------FEALI-ERKRMIRRAIEE--ANIPYTYVSANCFASY 161 (318)
T ss_dssp CSSCT--TTCC---CC--------------------HH------HHHHH-HHHHHHHHHHHH--TTCCBEEEECCEEHHH
T ss_pred cccCc--cccc---CC--------------------CC------cchhH-HHHHHHHHHHHh--cCCCeEEEEcceehhh
Confidence 44211 1100 00 00 01358 999999999976 4899999999988663
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPP 516 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 516 (596)
.. ..++.....+....++++++..++|++++|+|.+++.++..... .++
T Consensus 162 ~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~Dva~~~~~~l~~~~~------------------~~~ 210 (318)
T 2r6j_A 162 FI-------------NYLLRPYDPKDEITVYGTGEAKFAMNYEQDIGLYTIKVATDPRA------------------LNR 210 (318)
T ss_dssp HH-------------HHHHCTTCCCSEEEEETTSCCEEEEECHHHHHHHHHHHTTCGGG------------------TTE
T ss_pred hh-------------hhhccccCCCCceEEecCCCceeeEeeHHHHHHHHHHHhcCccc------------------cCe
Confidence 10 11111111122234567788899999999999999998865422 356
Q ss_pred eEEcc-CCCCCcccHHHHHHHHHHHcc
Q psy5825 517 VYNLS-ISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 517 vyni~-~~~~~~vt~~el~~~l~~~~~ 542 (596)
+|+++ ++ ..+|+.|+++.+.+.++
T Consensus 211 ~~~~~g~~--~~~s~~e~~~~~~~~~g 235 (318)
T 2r6j_A 211 VVIYRPST--NIITQLELISRWEKKIG 235 (318)
T ss_dssp EEECCCGG--GEEEHHHHHHHHHHHHT
T ss_pred EEEecCCC--CccCHHHHHHHHHHHhC
Confidence 77775 44 68999999999999888
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=99.55 E-value=7.4e-14 Score=141.34 Aligned_cols=193 Identities=13% Similarity=0.101 Sum_probs=124.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHH----
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDL---- 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~---- 338 (596)
.++.++.+|++++. .+..+++ ++|+|||+||.... ...+..++++|+.|+.+|++.
T Consensus 51 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 124 (281)
T 3m1a_A 51 DRAEAISLDVTDGE------RIDVVAADVLARYGRVDVLVNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQ 124 (281)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEEEeeCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57999999999654 3555554 68999999997532 123456889999995555444
Q ss_pred HHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 339 ATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 339 a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
+.. .+..+||++||++.+.... ....|+.||++.|.+++.
T Consensus 125 ~~~-~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 164 (281)
T 3m1a_A 125 MRE-RGSGSVVNISSFGGQLSFA---------------------------------------GFSAYSATKAALEQLSEG 164 (281)
T ss_dssp HHH-HTCEEEEEECCGGGTCCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHh-cCCCEEEEEcCccccCCCC---------------------------------------CchHHHHHHHHHHHHHHH
Confidence 444 3568999999987654210 225699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCcccc-CCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGW-SNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~-~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .|+++++++||.|.++...+...+ ..........+..... + ........+++++|+|++++.++..
T Consensus 165 la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~dva~a~~~~~~~ 238 (281)
T 3m1a_A 165 LADEVAPFGIKVLIVEPGAFRTNLFGKGAAYFSEENPAYAEKVGPTRQ--L----VQGSDGSQPGDPAKAAAAIRLALDT 238 (281)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCTTTCCCCEEECCBCTTTHHHHHHHHH--H----HHC-----CBCHHHHHHHHHHHHHS
T ss_pred HHHHhhccCcEEEEEecCccccccccccccccCCcchhhHHHhHHHHH--H----HhhccCCCCCCHHHHHHHHHHHHhC
Confidence 65 589999999999988754322111 1111111111111000 0 0112334678899999999999875
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.. .+.+|+++++ ....+.+.+..+...+.
T Consensus 239 ~~-------------------~~~~~~l~s~--~~~~i~g~~~~i~~~~~ 267 (281)
T 3m1a_A 239 EK-------------------TPLRLALGGD--AVDFLTGHLDSVRAELT 267 (281)
T ss_dssp SS-------------------CCSEEEESHH--HHHHHHHHHHHHHHHHH
T ss_pred CC-------------------CCeEEecCch--HHHHHHHHHHHHHHHHH
Confidence 42 4679999987 55556666666665443
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=99.54 E-value=1.7e-13 Score=136.12 Aligned_cols=174 Identities=12% Similarity=0.053 Sum_probs=122.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh------hhhHHHHHHHHHHHHHHHHHHHHh--
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF------DELIQDAFTLNIQATRELLDLATR-- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~NV~GT~~LL~~a~~-- 341 (596)
.++.++.+|++++. .+..+++ ++|+|||+||.... ...+...+.+|+.|+.+|+++|..
T Consensus 60 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~ 133 (255)
T 1fmc_A 60 GQAFACRCDITSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 57889999999653 4666655 79999999997643 233566889999999999999853
Q ss_pred -cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 -CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 -~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
..+..+||++||.+++.... ....|+.||++.|.+++.++
T Consensus 134 ~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~~~ 174 (255)
T 1fmc_A 134 EKNGGGVILTITSMAAENKNI---------------------------------------NMTSYASSKAAASHLVRNMA 174 (255)
T ss_dssp HHHTCEEEEEECCGGGTCCCT---------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEcchhhcCCCC---------------------------------------CCcccHHHHHHHHHHHHHHH
Confidence 13568999999988765311 12469999999999998765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+.++++|||.|+++.... . ....+...+..+. ....|++++|+|++++.++.....
T Consensus 175 ~~~~~~~i~v~~v~Pg~v~t~~~~~-------~-~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~~~~~~ 237 (255)
T 1fmc_A 175 FDLGEKNIRVNGIAPGAILTDALKS-------V-ITPEIEQKMLQHT---------PIRRLGQPQDIANAALFLCSPAAS 237 (255)
T ss_dssp HHHHTTTEEEEEEEECSBCSHHHHT-------T-CCHHHHHHHHHTC---------SSCSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHhhhcCcEEEEEecccCcchhhhh-------c-cChHHHHHHHhcC---------CcccCCCHHHHHHHHHHHhCCccc
Confidence 48999999999998863211 0 1122222222211 123578999999999988854322
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccH
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITW 530 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~ 530 (596)
. ..|++||++++ ..+|+
T Consensus 238 ~----------------~~G~~~~v~gg--~~~s~ 254 (255)
T 1fmc_A 238 W----------------VSGQILTVSGG--GVQEL 254 (255)
T ss_dssp T----------------CCSCEEEESTT--SCCCC
T ss_pred c----------------CCCcEEEECCc--eeccC
Confidence 1 25789999998 55553
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.51 E-value=5.3e-14 Score=135.31 Aligned_cols=140 Identities=11% Similarity=0.118 Sum_probs=107.2
Q ss_pred EEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEE
Q psy5825 280 HIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRCSQLKAIL 349 (596)
Q Consensus 280 ~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV 349 (596)
.++.+|++++ +.+..+++ ++|+|||+||.... ...+..++.+|+.|+.+|+++|.. .+..+||
T Consensus 45 ~~~~~D~~~~------~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~-~~~~~iv 117 (207)
T 2yut_A 45 RALPADLADE------LEAKALLEEAGPLDLLVHAVGKAGRASVREAGRDLVEEMLAAHLLTAAFVLKHARF-QKGARAV 117 (207)
T ss_dssp EECCCCTTSH------HHHHHHHHHHCSEEEEEECCCCCCCBCSCC---CHHHHHHHHHHHHHHHHHHHCCE-EEEEEEE
T ss_pred cEEEeeCCCH------HHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHh-cCCcEEE
Confidence 7888999964 45777777 89999999997643 124566889999999999999965 4678999
Q ss_pred EecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCC
Q psy5825 350 HVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLP 424 (596)
Q Consensus 350 ~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~ 424 (596)
++||.+++.... ....|+.||+..|.+++.++ .|++
T Consensus 118 ~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~~~~~~~~~gi~ 158 (207)
T 2yut_A 118 FFGAYPRYVQVP---------------------------------------GFAAYAAAKGALEAYLEAARKELLREGVH 158 (207)
T ss_dssp EECCCHHHHSST---------------------------------------TBHHHHHHHHHHHHHHHHHHHHHHTTTCE
T ss_pred EEcChhhccCCC---------------------------------------CcchHHHHHHHHHHHHHHHHHHHhhhCCE
Confidence 999998764211 22569999999999998765 5899
Q ss_pred EEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 425 LAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++++|||.|+++.. . +.+.....+++++|+|++++.++...
T Consensus 159 v~~v~pg~v~t~~~---------------------~-------~~~~~~~~~~~~~dva~~~~~~~~~~ 199 (207)
T 2yut_A 159 LVLVRLPAVATGLW---------------------A-------PLGGPPKGALSPEEAARKVLEGLFRE 199 (207)
T ss_dssp EEEECCCCBCSGGG---------------------G-------GGTSCCTTCBCHHHHHHHHHHHHC--
T ss_pred EEEEecCcccCCCc---------------------c-------ccCCCCCCCCCHHHHHHHHHHHHhCC
Confidence 99999999987521 0 01122367999999999999998654
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=3.7e-13 Score=132.91 Aligned_cols=170 Identities=14% Similarity=0.131 Sum_probs=120.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc---C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC---S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~---~ 343 (596)
..+.++.+|++++ +.+..+++ .+|+|||+||.... ...+..++.+|+.|+.+|++++... .
T Consensus 52 ~~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 125 (244)
T 1cyd_A 52 PGIEPVCVDLGDW------DATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR 125 (244)
T ss_dssp TTCEEEECCTTCH------HHHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCCCcEEecCCCH------HHHHHHHHHcCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhC
Confidence 3577889999964 34777765 48999999997542 1234568899999999999988752 1
Q ss_pred C-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 344 Q-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 344 ~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
+ ..+|||+||..++.... ....|+.||++.|.+++.++
T Consensus 126 ~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~~a~~ 166 (244)
T 1cyd_A 126 GVPGSIVNVSSMVAHVTFP---------------------------------------NLITYSSTKGAMTMLTKAMAME 166 (244)
T ss_dssp TCCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEEcchhhcCCCC---------------------------------------CcchhHHHHHHHHHHHHHHHHH
Confidence 3 57999999998765311 12469999999999998765
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
.|++++++|||.|+|+.... . .....++..+..+ ....+|++++|+|++++.++......
T Consensus 167 ~~~~gi~v~~v~pg~v~t~~~~~---~----~~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~- 229 (244)
T 1cyd_A 167 LGPHKIRVNSVNPTVVLTDMGKK---V----SADPEFARKLKER---------HPLRKFAEVEDVVNSILFLLSDRSAS- 229 (244)
T ss_dssp HGGGTEEEEEEEECCBTTHHHHH---H----TCCHHHHHHHHHH---------STTSSCBCHHHHHHHHHHHHSGGGTT-
T ss_pred hhhcCeEEEEEecCcccCccccc---c----ccCHHHHHHHHhc---------CCccCCCCHHHHHHHHHHHhCchhhc-
Confidence 58999999999999863210 0 0111222222222 12357999999999999988654321
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++|++.++
T Consensus 230 ---------------~~G~~~~v~gG 240 (244)
T 1cyd_A 230 ---------------TSGGGILVDAG 240 (244)
T ss_dssp ---------------CCSSEEEESTT
T ss_pred ---------------ccCCEEEECCC
Confidence 35789998877
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.49 E-value=5.9e-13 Score=134.47 Aligned_cols=193 Identities=10% Similarity=0.014 Sum_probs=117.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+|++++. .+..+++ ++|+|||+||.... ...+...+.+|+.|+.+++++
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 131 (278)
T 1spx_A 58 QNVNSVVADVTTDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKK 131 (278)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceeEEecccCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 46889999999653 4666655 79999999997532 223456889999999999999
Q ss_pred HHhc---CCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHH
Q psy5825 339 ATRC---SQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGES 414 (596)
Q Consensus 339 a~~~---~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~ 414 (596)
+... .+ .+||++||.++ +.... ....|+.||+..+.
T Consensus 132 ~~~~~~~~~-g~iv~isS~~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~ 171 (278)
T 1spx_A 132 AVPHLSSTK-GEIVNISSIASGLHATP---------------------------------------DFPYYSIAKAAIDQ 171 (278)
T ss_dssp HHHHHHHHT-CEEEEECCTTSSSSCCT---------------------------------------TSHHHHHHHHHHHH
T ss_pred HHHHHhhcC-CeEEEEecccccccCCC---------------------------------------CccHHHHHHHHHHH
Confidence 8752 13 79999999876 43210 12469999999999
Q ss_pred HHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHH
Q psy5825 415 VVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGV 489 (596)
Q Consensus 415 lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~ 489 (596)
+++.++ .|+++++++||.|.++..................+..+.. ..+ ...+++++|+|++++.+
T Consensus 172 ~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~----~~p-----~~~~~~~~dvA~~v~~l 242 (278)
T 1spx_A 172 YTRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE----CVP-----AGVMGQPQDIAEVIAFL 242 (278)
T ss_dssp HHHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH----HCT-----TSSCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCcEEEEEecCcccCccccccccCchhhhhhhHHHHHHHh----cCC-----CcCCCCHHHHHHHHHHH
Confidence 987765 6899999999999886432100000000000000111111 111 12478999999999998
Q ss_pred HHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHc
Q psy5825 490 VWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAG 541 (596)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~ 541 (596)
+....... ..|++|++.++ ..+++.++++.+.+.+
T Consensus 243 ~s~~~~~~---------------~tG~~~~vdgG--~~~~~~~~~~~~~~~~ 277 (278)
T 1spx_A 243 ADRKTSSY---------------IIGHQLVVDGG--SSLIMGLHCQDFAKLL 277 (278)
T ss_dssp HCHHHHTT---------------CCSCEEEESTT--GGGC------------
T ss_pred cCccccCc---------------ccCcEEEECCC--cccccCcccccHHHHh
Confidence 86543210 14889999998 7899999999887643
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=99.49 E-value=3.7e-13 Score=137.45 Aligned_cols=188 Identities=15% Similarity=0.090 Sum_probs=127.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc-------ccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH-------IHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~-------vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++. +|+|||+||.... ...+..++.+|+.|+.+|+++|...
T Consensus 76 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 149 (302)
T 1w6u_A 76 NKVHAIQCDVRDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQ 149 (302)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57999999999643 46666554 5999999996432 1235568899999999999888641
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+..+||++||.+++.... ....|+.||++.+.+++.
T Consensus 150 ~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 190 (302)
T 1w6u_A 150 LIKAQKGAAFLSITTIYAETGSG---------------------------------------FVVPSASAKAGVEAMSKS 190 (302)
T ss_dssp HHHTTCCEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEEcccccccCCC---------------------------------------CcchhHHHHHHHHHHHHH
Confidence 3457999999987654210 224699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|++++++|||.|+++... ..+.........+..+ .+ ...+++++|+|++++.++...
T Consensus 191 la~~~~~~gi~v~~v~Pg~v~t~~~~------~~~~~~~~~~~~~~~~----~p-----~~~~~~~~dva~~~~~l~~~~ 255 (302)
T 1w6u_A 191 LAAEWGKYGMRFNVIQPGPIKTKGAF------SRLDPTGTFEKEMIGR----IP-----CGRLGTVEELANLAAFLCSDY 255 (302)
T ss_dssp HHHHHGGGTEEEEEEEECCBCC------------CCTTSHHHHHHHTT----CT-----TSSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHhhhcCcEEEEEeeccCCCcchh------hhcccchhhHHHHHhc----CC-----cCCCCCHHHHHHHHHHHcCCc
Confidence 65 5899999999999886221 1111001111111111 11 125789999999999887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
... ..|++|++.++ ..+++.+++..+.+..+
T Consensus 256 ~~~----------------~~G~~~~v~gg--~~~~~~~~~~~~~~~~g 286 (302)
T 1w6u_A 256 ASW----------------INGAVIKFDGG--EEVLISGEFNDLRKVTK 286 (302)
T ss_dssp GTT----------------CCSCEEEESTT--HHHHHHSTTGGGGGCCH
T ss_pred ccc----------------cCCCEEEECCC--eeeccCCccccchhhcc
Confidence 221 35889999998 77777777766665544
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=99.45 E-value=1.7e-12 Score=128.22 Aligned_cols=169 Identities=15% Similarity=0.177 Sum_probs=118.2
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---CC
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC---SQ 344 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~---~~ 344 (596)
.+.++.+|++++ +.+..+++ .+|+|||+||...+. ..+..++++|+.|+.++++++... .+
T Consensus 53 ~~~~~~~D~~~~------~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~ 126 (244)
T 3d3w_A 53 GIEPVCVDLGDW------EATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIARG 126 (244)
T ss_dssp TCEEEECCTTCH------HHHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCH------HHHHHHHHHcCCCCEEEECCccCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCC
Confidence 567789999864 34777765 589999999975421 234568899999999999988752 13
Q ss_pred -CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 345 -LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 345 -vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
..+||++||..++.... ....|+.||++.|.+++.++
T Consensus 127 ~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~e~ 167 (244)
T 3d3w_A 127 VPGAIVNVSSQCSQRAVT---------------------------------------NHSVYCSTKGALDMLTKVMALEL 167 (244)
T ss_dssp CCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEeCchhhccCCC---------------------------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence 57999999988764210 12469999999999998765
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
.|++++++|||.|+++.... .+.. ..++..+..+ .....+++++|+|++++.++......
T Consensus 168 ~~~~i~v~~v~Pg~v~t~~~~~--~~~~-----~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~~~~-- 229 (244)
T 3d3w_A 168 GPHKIRVNAVNPTVVMTSMGQA--TWSD-----PHKAKTMLNR---------IPLGKFAEVEHVVNAILFLLSDRSGM-- 229 (244)
T ss_dssp GGGTEEEEEEEECCBTTTTHHH--HSCS-----TTHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGGTT--
T ss_pred cccCeEEEEEEeccccccchhh--hccC-----hHHHHHHHhh---------CCCCCCcCHHHHHHHHHHHcCccccC--
Confidence 58999999999998864211 0100 1111111111 11236899999999999988643221
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++|++.++
T Consensus 230 --------------~~G~~~~v~gG 240 (244)
T 3d3w_A 230 --------------TTGSTLPVEGG 240 (244)
T ss_dssp --------------CCSCEEEESTT
T ss_pred --------------CCCCEEEECCC
Confidence 35889999887
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.44 E-value=9.9e-13 Score=132.09 Aligned_cols=177 Identities=14% Similarity=0.080 Sum_probs=119.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ ++|+|||+||...+. ..+..++.+|+.|+.+|++++...
T Consensus 71 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 144 (274)
T 1ja9_A 71 AQGVAIQADISKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 144 (274)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcccccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999653 4666655 789999999975421 234568899999999999998763
Q ss_pred -CCCceEEEecCcccc-cCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 -SQLKAILHVSTLYTH-SYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~-g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
....+||++||.+++ +... ....|+.||++.|.+++.++
T Consensus 145 ~~~~~~iv~~sS~~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~~~ 185 (274)
T 1ja9_A 145 CRRGGRIILTSSIAAVMTGIP---------------------------------------NHALYAGSKAAVEGFCRAFA 185 (274)
T ss_dssp EEEEEEEEEECCGGGTCCSCC---------------------------------------SCHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCEEEEEcChHhccCCCC---------------------------------------CCchHHHHHHHHHHHHHHHH
Confidence 111699999999876 3210 12469999999999998765
Q ss_pred -----cCCCEEEecCCccccCCCCCcc-ccCCC-C-CCc-HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIV-GWSNN-L-YGP-GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~-G~~~~-~-~~~-~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
.|+.++++|||.|+++...... .+... . ... ..+...+.. .....+|++++|+|++++.++.
T Consensus 186 ~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~~~~~~dva~~i~~l~~ 256 (274)
T 1ja9_A 186 VDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLAN---------MNPLKRIGYPADIGRAVSALCQ 256 (274)
T ss_dssp HHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHH---------TSTTSSCBCHHHHHHHHHHHHS
T ss_pred HHhhhcCeEEEEEeeCcccccchhcccccccccccccCchHHHHHHHHh---------cCCCCCccCHHHHHHHHHHHhC
Confidence 5899999999999876321100 00000 0 001 111111111 1223468999999999999886
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++||+++|
T Consensus 257 ~~~~~----------------~~G~~~~v~gG 272 (274)
T 1ja9_A 257 EESEW----------------INGQVIKLTGG 272 (274)
T ss_dssp GGGTT----------------CCSCEEEESTT
T ss_pred ccccc----------------ccCcEEEecCC
Confidence 53221 25889999886
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=99.44 E-value=2.5e-12 Score=128.20 Aligned_cols=172 Identities=11% Similarity=0.059 Sum_probs=118.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCC-h-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLR-F-------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~-~-------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++ ++|+|||+||... . ...+...+.+|+.|+.++++++..
T Consensus 62 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 135 (260)
T 3awd_A 62 HDVSSVVMDVTNTE------SVQNAVRSVHEQEGRVDILVACAGICISEVKAEDMTDGQWLKQVDINLNGMFRSCQAVGR 135 (260)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 57999999999653 4555554 6899999999754 1 123456889999999999999864
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||.+.+.... +. ....|+.||++.|.++..
T Consensus 136 ~~~~~~~~~iv~~sS~~~~~~~~------------------------------------~~-~~~~Y~~sK~a~~~~~~~ 178 (260)
T 3awd_A 136 IMLEQKQGVIVAIGSMSGLIVNR------------------------------------PQ-QQAAYNASKAGVHQYIRS 178 (260)
T ss_dssp HHHHHTCEEEEEECCGGGTSCCS------------------------------------SS-CCHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCCEEEEEecchhcccCC------------------------------------CC-CccccHHHHHHHHHHHHH
Confidence 1 2567999999987653210 00 115699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|++++++|||.|+++.... ++ . ...++..+..+ .....+++++|+|++++.++...
T Consensus 179 l~~e~~~~gi~v~~v~pg~v~t~~~~~--~~----~-~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~ 242 (260)
T 3awd_A 179 LAAEWAPHGIRANAVAPTYIETTLTRF--GM----E-KPELYDAWIAG---------TPMGRVGQPDEVASVVQFLASDA 242 (260)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCTTTHH--HH----T-CHHHHHHHHHT---------CTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHhhhcCeEEEEEEeeeeccchhhc--cc----C-ChHHHHHHHhc---------CCcCCCCCHHHHHHHHHHHhCch
Confidence 65 58999999999999874310 00 0 11222222221 11235889999999999888643
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.++
T Consensus 243 ~~~----------------~~G~~~~v~gg 256 (260)
T 3awd_A 243 ASL----------------MTGAIVNVDAG 256 (260)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hcc----------------CCCcEEEECCc
Confidence 221 35889999887
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3.8e-12 Score=125.81 Aligned_cols=168 Identities=14% Similarity=0.047 Sum_probs=115.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++ +.+..+++ ++|+|||+||.... ...+..++.+|+.|+.++++++...
T Consensus 57 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 130 (248)
T 2pnf_A 57 VKAHGVEMNLLSE------ESINKAFEEIYNLVDGIDILVNNAGITRDKLFLRMSLLDWEEVLKVNLTGTFLVTQNSLRK 130 (248)
T ss_dssp CCEEEEECCTTCH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHCHH
T ss_pred CceEEEEccCCCH------HHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 5789999999964 34666665 78999999997642 1234568899999998877766431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+|||+||.+++.... ....|+.||+..+.++..+
T Consensus 131 ~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 171 (248)
T 2pnf_A 131 MIKQRWGRIVNISSVVGFTGNV---------------------------------------GQVNYSTTKAGLIGFTKSL 171 (248)
T ss_dssp HHHHTCEEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEccHHhcCCCC---------------------------------------CCchHHHHHHHHHHHHHHH
Confidence 3568999999986543100 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++|||.|+++.... + ...+ .....+.. ....+++++|+|++++.++....
T Consensus 172 a~e~~~~~i~v~~v~Pg~v~t~~~~~-------~--~~~~-~~~~~~~~--------~~~~~~~~~dva~~~~~l~~~~~ 233 (248)
T 2pnf_A 172 AKELAPRNVLVNAVAPGFIETDMTAV-------L--SEEI-KQKYKEQI--------PLGRFGSPEEVANVVLFLCSELA 233 (248)
T ss_dssp HHHHGGGTEEEEEEEECSBCCGGGGG-------S--CHHH-HHHHHHTC--------TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhcccCeEEEEEEeceecCchhhh-------c--cHHH-HHHHHhcC--------CCCCccCHHHHHHHHHHHhCchh
Confidence 5 58999999999998864210 1 1111 11111111 12358899999999999886532
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.++
T Consensus 234 ~~----------------~~G~~~~v~gg 246 (248)
T 2pnf_A 234 SY----------------ITGEVIHVNGG 246 (248)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred hc----------------CCCcEEEeCCC
Confidence 21 35889999886
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=3e-12 Score=128.18 Aligned_cols=173 Identities=13% Similarity=0.026 Sum_probs=118.1
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~a 339 (596)
.+.++.+|++++. .+..+++ .+|+|||+||.... ...+..++.+|+.|+.+|+++|
T Consensus 59 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 132 (261)
T 2wyu_A 59 GALLFRADVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARRA 132 (261)
T ss_dssp CCEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 4788999999653 3555554 68999999997642 1234568899999999999999
Q ss_pred Hhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 340 TRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 340 ~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
... ....+||++||.+++.... ....|+.||+..+.+++.
T Consensus 133 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~ 173 (261)
T 2wyu_A 133 EPLLREGGGIVTLTYYASEKVVP---------------------------------------KYNVMAIAKAALEASVRY 173 (261)
T ss_dssp TTTEEEEEEEEEEECGGGTSBCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCEEEEEecccccCCCC---------------------------------------CchHHHHHHHHHHHHHHH
Confidence 862 1125899999977653210 124699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.|+++.... ......+...+..+ .| ...+.+++|+|++++.++...
T Consensus 174 la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~~~~~~~~~~~~~----~p-----~~~~~~~~dva~~v~~l~s~~ 237 (261)
T 2wyu_A 174 LAYELGPKGVRVNAISAGPVRTVAARS-------IPGFTKMYDRVAQT----AP-----LRRNITQEEVGNLGLFLLSPL 237 (261)
T ss_dssp HHHHHGGGTCEEEEEEECCCCCTGGGG-------CTTHHHHHHHHHHH----ST-----TSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHhhhCcEEEEEeeCCCcCchhhh-------ccccHHHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHcChh
Confidence 65 48999999999998864311 11111222222111 11 123678999999999988543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
... ..|++|++.++ ..++
T Consensus 238 ~~~----------------~tG~~~~vdgG--~~~~ 255 (261)
T 2wyu_A 238 ASG----------------ITGEVVYVDAG--YHIM 255 (261)
T ss_dssp GTT----------------CCSCEEEESTT--GGGB
T ss_pred hcC----------------CCCCEEEECCC--cccc
Confidence 221 35889999988 4444
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=99.41 E-value=4.1e-13 Score=134.31 Aligned_cols=176 Identities=14% Similarity=0.086 Sum_probs=119.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ ++|+|||+||..... ..+...+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (259)
T 4e6p_A 54 PAAYAVQMDVTRQD------SIDAAIAATVEHAGGLDILVNNAALFDLAPIVEITRESYEKLFAINVAGTLFTLQAAARQ 127 (259)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHSSSCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999654 4666655 789999999975421 345568899999999999998642
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||.+.+.... ....|+.||+..+.+++.
T Consensus 128 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~ 168 (259)
T 4e6p_A 128 MIAQGRGGKIINMASQAGRRGEA---------------------------------------LVAIYCATKAAVISLTQS 168 (259)
T ss_dssp HHHHTSCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEEECChhhccCCC---------------------------------------CChHHHHHHHHHHHHHHH
Confidence 1246899999988754210 224699999999999988
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHh---ccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAAL---GLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~---g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
++ .|+++++++||.|+++.... ...++..+.. +......+.......|++++|+|++++.++
T Consensus 169 la~e~~~~gi~vn~v~PG~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~~~dva~~v~~L~ 238 (259)
T 4e6p_A 169 AGLDLIKHRINVNAIAPGVVDGEHWDG----------VDALFARYENRPRGEKKRLVGEAVPFGRMGTAEDLTGMAIFLA 238 (259)
T ss_dssp HHHHHGGGTEEEEEEEECCBCSTTHHH----------HHHHHHHHHTCCTTHHHHHHHHHSTTSSCBCTHHHHHHHHHTT
T ss_pred HHHHhhhcCCEEEEEEECCCccchhhh----------hhhhhhhhccCChHHHHHHHhccCCCCCCcCHHHHHHHHHHHh
Confidence 66 58999999999998863211 0011111110 000001111223457899999999998887
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|++|++.+|
T Consensus 239 s~~~~~----------------itG~~i~vdgG 255 (259)
T 4e6p_A 239 SAESDY----------------IVSQTYNVDGG 255 (259)
T ss_dssp SGGGTT----------------CCSCEEEESTT
T ss_pred CCccCC----------------CCCCEEEECcC
Confidence 543321 36899999988
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.41 E-value=6.8e-13 Score=130.63 Aligned_cols=167 Identities=15% Similarity=0.163 Sum_probs=117.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCChh-----------hhHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRFD-----------ELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~~-----------~~~~~~~~~NV~GT~~LL~~a 339 (596)
..+.++.+|++++ +.+..+++ .+|+|||+||..... ..+...+.+|+.|+.+|+++|
T Consensus 39 ~~~~~~~~D~~~~------~~~~~~~~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 112 (242)
T 1uay_A 39 EDLIYVEGDVTRE------EDVRRAVARAQEEAPLFAVVSAAGVGLAEKILGKEGPHGLESFRRVLEVNLLGTFNVLRLA 112 (242)
T ss_dssp SSSEEEECCTTCH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCSBCSSSBCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred cceEEEeCCCCCH------HHHHHHHHHHHhhCCceEEEEcccccCcccccccccccchHHHHHHHHHHhHHHHHHHHHH
Confidence 4568899999964 34666665 789999999975422 156678999999999999998
Q ss_pred Hhc-CC--------CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHH
Q psy5825 340 TRC-SQ--------LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKA 410 (596)
Q Consensus 340 ~~~-~~--------vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~ 410 (596)
... .. ..+||++||.+++.... ....|+.||+
T Consensus 113 ~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~ 153 (242)
T 1uay_A 113 AWAMRENPPDAEGQRGVIVNTASVAAFEGQI---------------------------------------GQAAYAASKG 153 (242)
T ss_dssp HHHHTTCCCCTTSCSEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHH
T ss_pred HHHHHhcCCCCCCCCeEEEEeCChhhccCCC---------------------------------------CCchhhHHHH
Confidence 752 11 13899999998765311 2246999999
Q ss_pred HHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHH
Q psy5825 411 IGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNM 485 (596)
Q Consensus 411 ~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~a 485 (596)
..+.++..++ .|++++++|||.|+++.... + +..+...+..+ . +. ...+++++|+|++
T Consensus 154 a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~-------~--~~~~~~~~~~~-~---~~----~~~~~~~~dva~~ 216 (242)
T 1uay_A 154 GVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQG-------L--PEKAKASLAAQ-V---PF----PPRLGRPEEYAAL 216 (242)
T ss_dssp HHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHHT-------S--CHHHHHHHHTT-C---CS----SCSCCCHHHHHHH
T ss_pred HHHHHHHHHHHHHhhcCcEEEEEEeccCcchhhhc-------c--chhHHHHHHhh-C---CC----cccCCCHHHHHHH
Confidence 9999987765 48999999999998864211 1 11222222211 1 10 0247899999999
Q ss_pred HHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 486 MLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 486 ii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++.++... . ..|++|++.++
T Consensus 217 ~~~l~~~~-~-----------------~~G~~~~v~gG 236 (242)
T 1uay_A 217 VLHILENP-M-----------------LNGEVVRLDGA 236 (242)
T ss_dssp HHHHHHCT-T-----------------CCSCEEEESTT
T ss_pred HHHHhcCC-C-----------------CCCcEEEEcCC
Confidence 99988652 1 35889999888
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=99.41 E-value=1.4e-12 Score=130.40 Aligned_cols=176 Identities=10% Similarity=0.064 Sum_probs=115.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc-------c-cEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH-------I-HVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~-------v-d~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++. + |+|||+||.... ...+..++.+|+.|+.+|++++..
T Consensus 63 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~i~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 136 (264)
T 2pd6_A 63 GNHAAFQADVSEAR------AARCLLEQVQACFSRPPSVVVSCAGITQDEFLLHMSEDDWDKVIAVNLKGTFLVTQAAAQ 136 (264)
T ss_dssp -CCEEEECCTTSHH------HHHHHHHHHHHHHSSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cceEEEEecCCCHH------HHHHHHHHHHHHhCCCCeEEEECCCcCCCcchhhCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence 46889999999643 46666554 3 999999997642 124556889999999999999876
Q ss_pred c---CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 342 C---SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 342 ~---~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
. .+ ..+||++||.+.+.... ....|+.||++.+.++.
T Consensus 137 ~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~ 177 (264)
T 2pd6_A 137 ALVSNGCRGSIINISSIVGKVGNV---------------------------------------GQTNYAASKAGVIGLTQ 177 (264)
T ss_dssp HHHHHTCCEEEEEECCTHHHHCCT---------------------------------------TBHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCceEEEECChhhccCCC---------------------------------------CChhhHHHHHHHHHHHH
Confidence 2 12 56899999986543210 12469999999999887
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++ .|++++++|||.|+++..... ...++..+..+ . ....+++++|+|++++.++..
T Consensus 178 ~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~~----~-----~~~~~~~~~dva~~~~~l~~~ 239 (264)
T 2pd6_A 178 TAARELGRHGIRCNSVLPGFIATPMTQKV---------PQKVVDKITEM----I-----PMGHLGDPEDVADVVAFLASE 239 (264)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCSCC-------------------CTGGG----C-----TTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHhhhcCeEEEEEeeecccccchhhc---------CHHHHHHHHHh----C-----CCCCCCCHHHHHHHHHHHcCC
Confidence 765 589999999999998743210 00111011110 1 113578999999999988864
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHH
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el 533 (596)
.... ..|.+|++.++ ..++++.+
T Consensus 240 ~~~~----------------~~G~~~~v~gg--~~~~~~~~ 262 (264)
T 2pd6_A 240 DSGY----------------ITGTSVEVTGG--LFMAENLY 262 (264)
T ss_dssp GGTT----------------CCSCEEEESTT--C-------
T ss_pred cccC----------------CCCCEEEECCC--ceeccccC
Confidence 3221 35889999988 65655544
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=99.41 E-value=1.6e-12 Score=126.43 Aligned_cols=146 Identities=10% Similarity=0.089 Sum_probs=103.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.++.++.+|++++ +++..+++++|+|||+|+.. |+. +++++++|.. .++.+|||+||+++
T Consensus 52 ~~~~~~~~D~~d~------~~~~~~~~~~d~vv~~ag~~------------n~~-~~~~~~~~~~-~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 52 ERVTVIEGSFQNP------GXLEQAVTNAEVVFVGAMES------------GSD-MASIVKALSR-XNIRRVIGVSMAGL 111 (221)
T ss_dssp TTEEEEECCTTCH------HHHHHHHTTCSEEEESCCCC------------HHH-HHHHHHHHHH-TTCCEEEEEEETTT
T ss_pred CceEEEECCCCCH------HHHHHHHcCCCEEEEcCCCC------------Chh-HHHHHHHHHh-cCCCeEEEEeecee
Confidence 6799999999964 45888999999999999964 445 9999999998 57899999999999
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
|+..... ......+ . +.+.|+.+|+.+|.++.. .|++++++|||.|+++
T Consensus 112 ~~~~~~~------------------------~~~~~~~----~-~~~~y~~~K~~~e~~~~~--~~i~~~~vrpg~v~~~ 160 (221)
T 3r6d_A 112 SGEFPVA------------------------LEKWTFD----N-LPISYVQGERQARNVLRE--SNLNYTILRLTWLYND 160 (221)
T ss_dssp TSCSCHH------------------------HHHHHHH----T-SCHHHHHHHHHHHHHHHH--SCSEEEEEEECEEECC
T ss_pred cCCCCcc------------------------ccccccc----c-cccHHHHHHHHHHHHHHh--CCCCEEEEechhhcCC
Confidence 8742200 0000001 0 223799999999999875 5899999999999886
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH--Hhhh
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV--WKTA 494 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~--~~~~ 494 (596)
... + ..............+++.+|||++++.++ ....
T Consensus 161 ~~~---~------------------~~~~~~~~~~~~~~~~~~~dvA~~~~~l~~~~~~~ 199 (221)
T 3r6d_A 161 PEX---T------------------DYELIPEGAQFNDAQVSREAVVKAIFDILHAADET 199 (221)
T ss_dssp TTC---C------------------CCEEECTTSCCCCCEEEHHHHHHHHHHHHTCSCCG
T ss_pred CCC---c------------------ceeeccCCccCCCceeeHHHHHHHHHHHHHhcChh
Confidence 211 0 01111111111223899999999999998 6543
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=99.40 E-value=2.4e-12 Score=128.88 Aligned_cols=169 Identities=13% Similarity=0.087 Sum_probs=104.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..++ ..+|+|||+||..... ..+...+.+|+.|+.+|+++|..
T Consensus 63 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 136 (266)
T 1xq1_A 63 FQVTGSVCDASLRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHP 136 (266)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeeEEEECCCCCHH------HHHHHHHHHHHHhCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 47899999999643 355554 5689999999975421 23456889999999999999842
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||.+++.... ....|+.||+..+.+++.
T Consensus 137 ~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 177 (266)
T 1xq1_A 137 LLKASGCGNIIFMSSIAGVVSAS---------------------------------------VGSIYSATKGALNQLARN 177 (266)
T ss_dssp HHHHHSSCEEEEEC-------------------------------------------------CCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEccchhccCCC---------------------------------------CCchHHHHHHHHHHHHHH
Confidence 13568999999987754210 225699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|++++++|||.|+++..... . ...+...+.. ..+ ...+++++|+|++++.++...
T Consensus 178 la~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~-~~~~~~~~~~----~~~-----~~~~~~~~dva~~~~~l~~~~ 240 (266)
T 1xq1_A 178 LACEWASDGIRANAVAPAVIATPLAEAV-------Y-DDEFKKVVIS----RKP-----LGRFGEPEEVSSLVAFLCMPA 240 (266)
T ss_dssp HHHHHGGGTCEEEEEECCSCC------------------------------------------CCGGGGHHHHHHHTSGG
T ss_pred HHHHHhHhCcEEEEEeeCCCccchhhhh-------c-CHHHHHHHHh----cCC-----CCCCcCHHHHHHHHHHHcCcc
Confidence 65 489999999999998753211 0 0001101100 111 124788999999999887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.++
T Consensus 241 ~~~----------------~~G~~~~v~gG 254 (266)
T 1xq1_A 241 ASY----------------ITGQTICVDGG 254 (266)
T ss_dssp GTT----------------CCSCEEECCCC
T ss_pred ccC----------------ccCcEEEEcCC
Confidence 221 35889999987
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=99.40 E-value=1.8e-12 Score=127.75 Aligned_cols=195 Identities=8% Similarity=0.059 Sum_probs=118.7
Q ss_pred EEEeCCCCcccHHHHHHHHhhhhhHHH---hhhh--hhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCcc
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDELFDR---LKNE--QADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAAS 314 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~~~~~---l~~~--~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~ 314 (596)
.+||.+.++.-+..-+..++..+.+.. .+.. .......++.++.+|++++ +++..+++++|+|||+|+.
T Consensus 25 ~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~~~~~~~Dl~d~------~~~~~~~~~~D~vv~~a~~ 98 (236)
T 3qvo_A 25 NVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPYPTNSQIIMGDVLNH------AALKQAMQGQDIVYANLTG 98 (236)
T ss_dssp EEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTTEEEEECCTTCH------HHHHHHHTTCSEEEEECCS
T ss_pred EEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccccCCcEEEEecCCCH------HHHHHHhcCCCEEEEcCCC
Confidence 356666666666655555554321110 0100 0111124799999999964 4589999999999999987
Q ss_pred CChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhh
Q psy5825 315 LRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSS 394 (596)
Q Consensus 315 v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p 394 (596)
..+. .++.+|+.+|.. .++.+|||+||+++|+..... .. . .. .
T Consensus 99 ~~~~-----------~~~~~~~~~~~~-~~~~~iV~iSS~~~~~~~~~~---~~----~---------------~~---~ 141 (236)
T 3qvo_A 99 EDLD-----------IQANSVIAAMKA-CDVKRLIFVLSLGIYDEVPGK---FV----E---------------WN---N 141 (236)
T ss_dssp TTHH-----------HHHHHHHHHHHH-TTCCEEEEECCCCC--------------------------------------
T ss_pred Cchh-----------HHHHHHHHHHHH-cCCCEEEEEecceecCCCCcc---cc----c---------------ch---h
Confidence 4421 357799999998 578999999999998753210 00 0 00 0
Q ss_pred hhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCcc
Q psy5825 395 MLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKC 474 (596)
Q Consensus 395 ~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~ 474 (596)
. ....|...+..+|.++.. .|++++|+|||.|+++....+ ...........
T Consensus 142 ~-----~~~~~~~~~~~~~~~l~~--~gi~~~~vrPg~i~~~~~~~~----------------------~~~~~~~~~~~ 192 (236)
T 3qvo_A 142 A-----VIGEPLKPFRRAADAIEA--SGLEYTILRPAWLTDEDIIDY----------------------ELTSRNEPFKG 192 (236)
T ss_dssp --------CGGGHHHHHHHHHHHT--SCSEEEEEEECEEECCSCCCC----------------------EEECTTSCCSC
T ss_pred h-----cccchHHHHHHHHHHHHH--CCCCEEEEeCCcccCCCCcce----------------------EEeccCCCCCC
Confidence 0 112234445556666643 689999999999988632110 00111111123
Q ss_pred ccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 475 DLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 475 d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.+++++|||++++.++..... ..+++|+++++
T Consensus 193 ~~i~~~DvA~~i~~ll~~~~~-----------------~~g~~~~i~~~ 224 (236)
T 3qvo_A 193 TIVSRKSVAALITDIIDKPEK-----------------HIGENIGINQP 224 (236)
T ss_dssp SEEEHHHHHHHHHHHHHSTTT-----------------TTTEEEEEECS
T ss_pred cEECHHHHHHHHHHHHcCccc-----------------ccCeeEEecCC
Confidence 589999999999999976542 24789999987
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=99.40 E-value=4.4e-12 Score=125.12 Aligned_cols=169 Identities=12% Similarity=0.086 Sum_probs=117.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ ++|+|||+||.... ...+..++.+|+.|+.+|+++|...
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 124 (244)
T 1edo_A 51 GQAITFGGDVSKEA------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI 124 (244)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCcCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 57889999999643 4666655 68999999997642 1345668899999999999998752
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+.+.... ....|+.||+..+.++..+
T Consensus 125 ~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 165 (244)
T 1edo_A 125 MMKKRKGRIINIASVVGLIGNI---------------------------------------GQANYAAAKAGVIGFSKTA 165 (244)
T ss_dssp HHHHTCEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEECChhhcCCCC---------------------------------------CCccchhhHHHHHHHHHHH
Confidence 2568999999986543110 1246999999999888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++|||.|+++.... + ...+...+.. . ++ ...+++++|+|++++.++..+.
T Consensus 166 a~e~~~~gi~v~~v~Pg~v~t~~~~~-------~--~~~~~~~~~~-~---~~-----~~~~~~~~dva~~~~~l~~~~~ 227 (244)
T 1edo_A 166 AREGASRNINVNVVCPGFIASDMTAK-------L--GEDMEKKILG-T---IP-----LGRTGQPENVAGLVEFLALSPA 227 (244)
T ss_dssp HHHHHTTTEEEEEEEECSBCSHHHHT-------T--CHHHHHHHHT-S---CT-----TCSCBCHHHHHHHHHHHHHCSG
T ss_pred HHHhhhcCCEEEEEeeCccccchhhh-------c--ChHHHHHHhh-c---CC-----CCCCCCHHHHHHHHHHHhCCCc
Confidence 5 58999999999998753210 0 1112111111 1 11 2357899999999999884332
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.++
T Consensus 228 ~~~---------------~~G~~~~v~gG 241 (244)
T 1edo_A 228 ASY---------------ITGQAFTIDGG 241 (244)
T ss_dssp GGG---------------CCSCEEEESTT
T ss_pred cCC---------------cCCCEEEeCCC
Confidence 211 35889999887
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=8.8e-12 Score=123.63 Aligned_cols=168 Identities=13% Similarity=0.086 Sum_probs=118.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 127 (246)
T 3osu_A 54 VDSFAIQANVADAD------EVKAMIKEVVSQFGSLDVLVNNAGITRDNLLMRMKEQEWDDVIDTNLKGVFNCIQKATPQ 127 (246)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999653 4665554 78999999997632 1234568999999999999998421
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+.+.... ....|+.||+..+.+++.+
T Consensus 128 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 168 (246)
T 3osu_A 128 MLRQRSGAIINLSSVVGAVGNP---------------------------------------GQANYVATKAGVIGLTKSA 168 (246)
T ss_dssp HHHHTCEEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEcchhhcCCCC---------------------------------------CChHHHHHHHHHHHHHHHH
Confidence 3567999999987653210 1246999999999888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++.... + ...+...+..+ .....+...+|+|++++.++....
T Consensus 169 a~e~~~~gi~vn~v~PG~v~t~~~~~-------~--~~~~~~~~~~~---------~p~~r~~~~~dva~~v~~l~s~~~ 230 (246)
T 3osu_A 169 ARELASRGITVNAVAPGFIVSDMTDA-------L--SDELKEQMLTQ---------IPLARFGQDTDIANTVAFLASDKA 230 (246)
T ss_dssp HHHHGGGTEEEEEEEECSBGGGCCSC-------S--CHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHTSGGG
T ss_pred HHHhcccCeEEEEEEECCCcCCcccc-------c--CHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHhCccc
Confidence 5 68999999999998864321 1 12222222221 122357788999999998876543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 231 ~~----------------itG~~i~vdgG 243 (246)
T 3osu_A 231 KY----------------ITGQTIHVNGG 243 (246)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------CCCCEEEeCCC
Confidence 21 36899999887
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=99.39 E-value=5.5e-12 Score=125.35 Aligned_cols=169 Identities=14% Similarity=0.136 Sum_probs=117.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCcc-CC---hh----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAAS-LR---FD----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~-v~---~~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++ ++|+|||+||. .. +. ..+..++.+|+.|+.++++++..
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~ 130 (258)
T 3afn_B 57 GDAAFFAADLATSE------ACQQLVDEFVAKFGGIDVLINNAGGLVGRKPLPEIDDTFYDAVMDANIRSVVMTTKFALP 130 (258)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCcCccccCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 57899999999653 4666665 79999999997 32 11 23456889999999999998753
Q ss_pred c--------CCCceEEEecCccccc-CCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHH
Q psy5825 342 C--------SQLKAILHVSTLYTHS-YREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIG 412 (596)
Q Consensus 342 ~--------~~vkrfV~vSS~~v~g-~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~a 412 (596)
. ....+||++||.+.+. ... ....|+.||++.
T Consensus 131 ~~~~~~~~~~~~~~iv~~sS~~~~~~~~~---------------------------------------~~~~Y~~sK~a~ 171 (258)
T 3afn_B 131 HLAAAAKASGQTSAVISTGSIAGHTGGGP---------------------------------------GAGLYGAAKAFL 171 (258)
T ss_dssp HHHHHHHHHTSCEEEEEECCTHHHHCCCT---------------------------------------TCHHHHHHHHHH
T ss_pred HHHhcccCCCCCcEEEEecchhhccCCCC---------------------------------------CchHHHHHHHHH
Confidence 1 1127899999987653 100 124699999999
Q ss_pred HHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHH
Q psy5825 413 ESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMML 487 (596)
Q Consensus 413 E~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii 487 (596)
|.+++.++ .|++++++|||.|+++.... . ...++..+..+ .....+++++|+|++++
T Consensus 172 ~~~~~~~~~e~~~~gi~v~~v~Pg~v~t~~~~~-------~--~~~~~~~~~~~---------~~~~~~~~~~dva~~~~ 233 (258)
T 3afn_B 172 HNVHKNWVDFHTKDGVRFNIVSPGTVDTAFHAD-------K--TQDVRDRISNG---------IPMGRFGTAEEMAPAFL 233 (258)
T ss_dssp HHHHHHHHHHHGGGTEEEEEEEECSBSSGGGTT-------C--CHHHHHHHHTT---------CTTCSCBCGGGTHHHHH
T ss_pred HHHHHHHHHhhcccCeEEEEEeCCCcccccccc-------c--CHHHHHHHhcc---------CCCCcCCCHHHHHHHHH
Confidence 99998765 48999999999998864321 1 12222222221 11236899999999999
Q ss_pred HHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 488 GVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.++....... ..|++|++.++
T Consensus 234 ~l~~~~~~~~---------------~~G~~~~v~gg 254 (258)
T 3afn_B 234 FFASHLASGY---------------ITGQVLDINGG 254 (258)
T ss_dssp HHHCHHHHTT---------------CCSEEEEESTT
T ss_pred HHhCcchhcc---------------ccCCEEeECCC
Confidence 9886532200 25789999887
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.39 E-value=1.8e-12 Score=131.20 Aligned_cols=186 Identities=14% Similarity=0.141 Sum_probs=129.5
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCC----hh----hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLR----FD----ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~----~~----~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
++.++.+|++++. ++..+++ .+|+|||+||... +. ..+...+++|+.|+.+++++|...
T Consensus 64 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 137 (281)
T 3svt_A 64 AIRYEPTDITNED------ETARAVDAVTAWHGRLHGVVHCAGGSENIGPITQVDSEAWRRTVDLNVNGTMYVLKHAARE 137 (281)
T ss_dssp EEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred eEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 7899999999653 3555544 5799999999732 11 234568899999999999988652
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||++.+.... ....|+.||+..+.+++.+
T Consensus 138 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~l~~~l 178 (281)
T 3svt_A 138 MVRGGGGSFVGISSIAASNTHR---------------------------------------WFGAYGVTKSAVDHLMQLA 178 (281)
T ss_dssp HHHTTCEEEEEECCHHHHSCCT---------------------------------------TCTHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEeCHHHcCCCC---------------------------------------CChhHHHHHHHHHHHHHHH
Confidence 2345999999988764211 2256999999999999876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+++++||.|.++..... .....+...+..+ . ....+..++|+|++++.++....
T Consensus 179 a~e~~~~gi~vn~v~PG~v~t~~~~~~-------~~~~~~~~~~~~~----~-----p~~r~~~~~dva~~~~~l~s~~~ 242 (281)
T 3svt_A 179 ADELGASWVRVNSIRPGLIRTDLVAAI-------TESAELSSDYAMC----T-----PLPRQGEVEDVANMAMFLLSDAA 242 (281)
T ss_dssp HHHHGGGTEEEEEEEECSBCSGGGHHH-------HTCHHHHHHHHHH----C-----SSSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhhhcCeEEEEEEeCcCcCcchhhc-------ccCHHHHHHHHhc----C-----CCCCCCCHHHHHHHHHHHhCccc
Confidence 5 679999999999987632110 0011122222111 1 12346789999999999886543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc-HHHHHHHHHHHcc
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT-WLEYMNSVQAAGK 542 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt-~~el~~~l~~~~~ 542 (596)
.. ..|++|++.+| ..++ ..++...+..+++
T Consensus 243 ~~----------------itG~~~~vdgG--~~~~~~~~~~~~~~~~~~ 273 (281)
T 3svt_A 243 SF----------------VTGQVINVDGG--QMLRRGPDFSAMLEPVFG 273 (281)
T ss_dssp TT----------------CCSCEEEESTT--GGGSCCCCCHHHHHHHHC
T ss_pred CC----------------CCCCEEEeCCC--hhcccCCcchhccccccC
Confidence 21 36899999988 5555 6678888888776
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.39 E-value=7.8e-12 Score=123.83 Aligned_cols=170 Identities=9% Similarity=0.031 Sum_probs=117.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh----------hhHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD----------ELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~----------~~~~~~~~~NV~GT~~LL~~a 339 (596)
.++.++.+|++++. .+..+++ ++|+|||+||..... ..+...+.+|+.|+.++++++
T Consensus 52 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~ 125 (250)
T 2cfc_A 52 DKVLRVRADVADEG------DVNAAIAATMEQFGAIDVLVNNAGITGNSEAGVLHTTPVEQFDKVMAVNVRGIFLGCRAV 125 (250)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCTTCCSGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCcchhhhCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 46899999999653 4666654 789999999975421 235568899999998887777
Q ss_pred Hhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 340 TRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 340 ~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
... .+..+||++||.+++.... ....|+.||++.+.++
T Consensus 126 ~~~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~ 166 (250)
T 2cfc_A 126 LPHMLLQGAGVIVNIASVASLVAFP---------------------------------------GRSAYTTSKGAVLQLT 166 (250)
T ss_dssp HHHHHHHTCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCEEEEECChhhccCCC---------------------------------------CchhHHHHHHHHHHHH
Confidence 531 2568999999988764210 1246999999999999
Q ss_pred HHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+.++ .|++++++|||.|+++..... . ....+...+..+ .....+++++|+|++++.++.
T Consensus 167 ~~l~~e~~~~gi~v~~v~Pg~v~t~~~~~~---~----~~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~ 230 (250)
T 2cfc_A 167 KSVAVDYAGSGIRCNAVCPGMIETPMTQWR---L----DQPELRDQVLAR---------IPQKEIGTAAQVADAVMFLAG 230 (250)
T ss_dssp HHHHHHHGGGTEEEEEEEECSBCSTTTHHH---H----TSHHHHHHHHTT---------CTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHhcccCeEEEEEEeCcCccCccccc---c----CCHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcC
Confidence 8765 489999999999998743110 0 011121112111 112357899999999998885
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.+|
T Consensus 231 ~~~~~----------------~~G~~~~v~gG 246 (250)
T 2cfc_A 231 EDATY----------------VNGAALVMDGA 246 (250)
T ss_dssp TTCTT----------------CCSCEEEESTT
T ss_pred chhhc----------------ccCCEEEECCc
Confidence 43211 35889999877
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.38 E-value=2.3e-12 Score=129.10 Aligned_cols=201 Identities=12% Similarity=0.107 Sum_probs=130.5
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEE
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIH 310 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH 310 (596)
.+||.+.++.-+..-...++..+ ++-.-+.. ......++.++.+|++++. .+..+++ ++|+|||
T Consensus 30 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~-~~~~~~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 30 VVVITGASQGIGAGLVRAYRDRNYRVVATSRSI-KPSADPDIHTVAGDISKPE------TADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp EEEESSCSSHHHHHHHHHHHHTTCEEEEEESSC-CCCSSTTEEEEESCTTSHH------HHHHHHHHHHHHHSCCCEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCh-hhcccCceEEEEccCCCHH------HHHHHHHHHHHHCCCCCEEEE
Confidence 46777766555555444444421 11000000 0011146889999999654 4665554 7899999
Q ss_pred cCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHH
Q psy5825 311 AAASLRF-------DELIQDAFTLNIQATRELLDLATR---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHV 380 (596)
Q Consensus 311 ~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~ 380 (596)
+||.... ...+...+++|+.|+.++++++.. ..+..+||++||..++....
T Consensus 103 nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------------- 163 (260)
T 3un1_A 103 NAGVFLAKPFVEMTQEDYDHNLGVNVAGFFHITQRAAAEMLKQGSGHIVSITTSLVDQPMV------------------- 163 (260)
T ss_dssp CCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCTTTTSCBT-------------------
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEEechhhccCCC-------------------
Confidence 9997532 123556889999999999998842 14568999999987754211
Q ss_pred HhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHH
Q psy5825 381 MQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAA 455 (596)
Q Consensus 381 ~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~ 455 (596)
+. ....|+.||++.+.+++.++ .|+++++++||.|+++...+ ...
T Consensus 164 -----------------~~-~~~~Y~~sKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~~~~------------~~~ 213 (260)
T 3un1_A 164 -----------------GM-PSALASLTKGGLNAVTRSLAMEFSRSGVRVNAVSPGVIKTPMHPA------------ETH 213 (260)
T ss_dssp -----------------TC-CCHHHHHHHHHHHHHHHHHHHHTTTTTEEEEEEEECCBCCTTSCG------------GGH
T ss_pred -----------------CC-ccHHHHHHHHHHHHHHHHHHHHhCcCCeEEEEEeecCCCCCCCCH------------HHH
Confidence 00 12469999999999998876 48999999999998864311 011
Q ss_pred HHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 456 AGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 456 ~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..+. + ......+..++|+|++++.+..... ..|++|++.+|
T Consensus 214 ~~~~-~--------~~p~~r~~~~~dva~av~~L~~~~~------------------itG~~i~vdGG 254 (260)
T 3un1_A 214 STLA-G--------LHPVGRMGEIRDVVDAVLYLEHAGF------------------ITGEILHVDGG 254 (260)
T ss_dssp HHHH-T--------TSTTSSCBCHHHHHHHHHHHHHCTT------------------CCSCEEEESTT
T ss_pred HHHh-c--------cCCCCCCcCHHHHHHHHHHhcccCC------------------CCCcEEEECCC
Confidence 1111 1 1122357789999999998833211 36899999988
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=2.8e-11 Score=121.92 Aligned_cols=171 Identities=12% Similarity=0.022 Sum_probs=117.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh------------------hhHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD------------------ELIQDAFTLNIQA 331 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~------------------~~~~~~~~~NV~G 331 (596)
.++.++.+|++++.. ..+.+..+++ .+|+|||+||..... ..+..++.+|+.|
T Consensus 62 ~~~~~~~~Dl~~~~~--~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g 139 (276)
T 1mxh_A 62 GSAVLCKGDLSLSSS--LLDCCEDIIDCSFRAFGRCDVLVNNASAYYPTPLLPGDDTNGAADAKPIDAQVAELFGSNAVA 139 (276)
T ss_dssp TCEEEEECCCSSSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-----------CHHHHHHHHHHHHTHH
T ss_pred CceEEEeccCCCccc--cHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCccccCcccccccccchHHHHHHHHHhccHH
Confidence 578999999997611 0023444443 689999999975321 3455689999999
Q ss_pred HHHHHHHHHhc--CCC------ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCc
Q psy5825 332 TRELLDLATRC--SQL------KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNN 403 (596)
Q Consensus 332 T~~LL~~a~~~--~~v------krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~ 403 (596)
+.+|++++... .+. .+||++||.+++.... ...
T Consensus 140 ~~~l~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~ 180 (276)
T 1mxh_A 140 PLFLIRAFARRQGEGGAWRSRNLSVVNLCDAMTDLPLP---------------------------------------GFC 180 (276)
T ss_dssp HHHHHHHHHHTC-------CCCEEEEEECCGGGGSCCT---------------------------------------TCH
T ss_pred HHHHHHHHHHHHhcCCCCCCCCcEEEEECchhhcCCCC---------------------------------------CCe
Confidence 99999999862 223 7999999988764210 124
Q ss_pred hHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCcccccc
Q psy5825 404 SYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIP 478 (596)
Q Consensus 404 ~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ip 478 (596)
.|+.||+..+.+++.++ .|+.+++++||.|+++ . ++ ...+...+... .+ ...++++
T Consensus 181 ~Y~asK~a~~~l~~~la~e~~~~gi~v~~v~PG~v~t~-~----~~------~~~~~~~~~~~----~p----~~r~~~~ 241 (276)
T 1mxh_A 181 VYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLP-P----AM------PQETQEEYRRK----VP----LGQSEAS 241 (276)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCC-S----SS------CHHHHHHHHTT----CT----TTSCCBC
T ss_pred ehHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCcccCC-c----cC------CHHHHHHHHhc----CC----CCCCCCC
Confidence 69999999999998765 5899999999999886 2 10 11222222111 11 1123789
Q ss_pred HHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 479 VDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 479 VDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++|+|++++.++...... ..|++|++.+|
T Consensus 242 ~~dva~~v~~l~s~~~~~----------------~tG~~~~vdgG 270 (276)
T 1mxh_A 242 AAQIADAIAFLVSKDAGY----------------ITGTTLKVDGG 270 (276)
T ss_dssp HHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred HHHHHHHHHHHhCccccC----------------ccCcEEEECCc
Confidence 999999999988643221 35889999887
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=99.38 E-value=3.5e-12 Score=127.77 Aligned_cols=182 Identities=14% Similarity=0.060 Sum_probs=120.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ ++|+|||+||.... ...+...+.+|+.|+.++++++...
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 130 (263)
T 3ai3_A 57 VRVLEVAVDVATPE------GVDAVVESVRSSFGGADILVNNAGTGSNETIMEAADEKWQFYWELLVMAAVRLARGLVPG 130 (263)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999653 4555554 78999999997542 1245568899999999999988531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+++.... ....|+.||+..+.+++.+
T Consensus 131 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 171 (263)
T 3ai3_A 131 MRARGGGAIIHNASICAVQPLW---------------------------------------YEPIYNVTKAALMMFSKTL 171 (263)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECchhhcCCCC---------------------------------------CcchHHHHHHHHHHHHHHH
Confidence 3568999999998765311 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCc-cccCCCCCC-cHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPI-VGWSNNLYG-PGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~-~G~~~~~~~-~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|++++++|||.|+++..... +.+...... ...++..+..+. . ....+++++|+|++++.++..
T Consensus 172 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----p~~~~~~~~dvA~~~~~l~s~ 243 (263)
T 3ai3_A 172 ATEVIKDNIRVNCINPGLILTPDWIKTAKELTKDNGGDWKGYLQSVADEH---A-----PIKRFASPEELANFFVFLCSE 243 (263)
T ss_dssp HHHHGGGTEEEEEEEECCBCCHHHHHHHHHHTTTTTCCHHHHHHHHHHHH---C-----TTCSCBCHHHHHHHHHHHTST
T ss_pred HHHhhhcCcEEEEEecCcccCcchhhhhHhhhcccCCcHHHHHHHHHhcC---C-----CCCCCcCHHHHHHHHHHHcCc
Confidence 5 589999999999988632110 000000000 011111111110 1 123588999999999988754
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
.... ..|++|++.+| ..++
T Consensus 244 ~~~~----------------~~G~~~~vdgG--~~~s 262 (263)
T 3ai3_A 244 RATY----------------SVGSAYFVDGG--MLKT 262 (263)
T ss_dssp TCTT----------------CCSCEEEESTT--CCCC
T ss_pred cccC----------------CCCcEEEECCC--cccc
Confidence 3211 35889999988 4443
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=99.37 E-value=3.1e-12 Score=126.50 Aligned_cols=167 Identities=13% Similarity=0.108 Sum_probs=108.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ ++|+|||+||..... ..+...+.+|+.|+.+|++++...
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 128 (247)
T 2hq1_A 55 INVVVAKGDVKNPE------DVENMVKTAMDAFGRIDILVNNAGITRDTLMLKMSEKDWDDVLNTNLKSAYLCTKAVSKI 128 (247)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHHHSCCCEEEECC---------------CHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999653 4555554 789999999976421 223568899999999998887641
Q ss_pred ---CCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+..+|||+||.+. ++.. ....|+.||++.+.+++.
T Consensus 129 ~~~~~~~~iv~~sS~~~~~~~~----------------------------------------~~~~Y~~sK~a~~~~~~~ 168 (247)
T 2hq1_A 129 MLKQKSGKIINITSIAGIIGNA----------------------------------------GQANYAASKAGLIGFTKS 168 (247)
T ss_dssp HHHHTCEEEEEECC-------------------------------------------------CHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEcChhhccCCC----------------------------------------CCcHhHHHHHHHHHHHHH
Confidence 35689999999854 3310 124699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.|.++... .+ +..+...+..+ .....+++++|+|++++.++...
T Consensus 169 la~e~~~~gi~v~~v~Pg~v~t~~~~-------~~--~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~~~~ 230 (247)
T 2hq1_A 169 IAKEFAAKGIYCNAVAPGIIKTDMTD-------VL--PDKVKEMYLNN---------IPLKRFGTPEEVANVVGFLASDD 230 (247)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCHHHH-------TS--CHHHHHHHHTT---------STTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHcCcEEEEEEEEEEeccchh-------hc--chHHHHHHHhh---------CCCCCCCCHHHHHHHHHHHcCcc
Confidence 65 5899999999999764210 00 11111111111 11235889999999999887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++||+.++
T Consensus 231 ~~~----------------~~G~~~~v~gG 244 (247)
T 2hq1_A 231 SNY----------------ITGQVINIDGG 244 (247)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred ccc----------------ccCcEEEeCCC
Confidence 221 25889999887
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=99.37 E-value=1.2e-11 Score=125.38 Aligned_cols=169 Identities=14% Similarity=0.019 Sum_probs=115.6
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------h---hhHHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------D---ELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~---~~~~~~~~~NV~GT~~LL~~a 339 (596)
.+.++.+|++++. .+..+++ .+|+|||+||.... . ..+...+.+|+.|+.++++++
T Consensus 72 ~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 145 (285)
T 2p91_A 72 SDLVVKCDVSLDE------DIKNLKKFLEENWGSLDIIVHSIAYAPKEEFKGGVIDTSREGFKIAMDISVYSLIALTREL 145 (285)
T ss_dssp CCCEEECCTTCHH------HHHHHHHHHHHHTSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CeEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCcccCCCCcccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 4778999999653 3555554 68999999997642 1 234568899999999999999
Q ss_pred HhcC--CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 340 TRCS--QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 340 ~~~~--~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
...- +..+||++||.+.+.... ....|+.||+..+.+++
T Consensus 146 ~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~ 186 (285)
T 2p91_A 146 LPLMEGRNGAIVTLSYYGAEKVVP---------------------------------------HYNVMGIAKAALESTVR 186 (285)
T ss_dssp GGGGTTSCCEEEEEECGGGTSBCT---------------------------------------TTTHHHHHHHHHHHHHH
T ss_pred HHHHHHcCCEEEEEccchhccCCC---------------------------------------CccHHHHHHHHHHHHHH
Confidence 7621 236999999987653210 12469999999999988
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++ .|+.+++++||.|+++.... ......++..+... .+ ...+.+++|+|++++.++..
T Consensus 187 ~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~----~p-----~~~~~~~~dva~~~~~l~s~ 250 (285)
T 2p91_A 187 YLAYDIAKHGHRINAISAGPVKTLAAYS-------ITGFHLLMEHTTKV----NP-----FGKPITIEDVGDTAVFLCSD 250 (285)
T ss_dssp HHHHHHHTTTCEEEEEEECCCCCSCC---------CTTHHHHHHHHHHH----ST-----TSSCCCHHHHHHHHHHHTSG
T ss_pred HHHHHhcccCcEEEEEEeCcccCchhhc-------ccchHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHcCC
Confidence 765 58999999999998864321 11111222221111 11 12367899999999988754
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|++|++.++
T Consensus 251 ~~~~----------------~tG~~~~vdgg 265 (285)
T 2p91_A 251 WARA----------------ITGEVVHVDNG 265 (285)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred cccC----------------CCCCEEEECCC
Confidence 3221 35889999887
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=99.37 E-value=4.6e-12 Score=126.10 Aligned_cols=173 Identities=13% Similarity=0.187 Sum_probs=117.0
Q ss_pred CcEEEEEeccCCC-CCCCCHHHHHHHh-------ccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhc---CC-
Q psy5825 277 RKVHIISGDISQP-SLGISSHDQQFIQ-------HHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRC---SQ- 344 (596)
Q Consensus 277 ~rv~~v~GDl~~~-~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~---~~- 344 (596)
.++.++.+|++++ . .+..++ .++|+|||+||... ...+..++++|+.|+.+|++++... .+
T Consensus 55 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~ 127 (254)
T 1sby_A 55 VNITFHTYDVTVPVA------ESKKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKG 127 (254)
T ss_dssp SEEEEEECCTTSCHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGT
T ss_pred ceEEEEEEecCCChH------HHHHHHHHHHHhcCCCCEEEECCccCC-HHHHhhhheeeehhHHHHHHHHHHHHHHhcC
Confidence 4789999999976 3 244443 37899999999864 3456779999999999999998742 11
Q ss_pred --CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 345 --LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 345 --vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
..+||++||.+++.... ....|+.||+..+.++..++
T Consensus 128 ~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~~ 168 (254)
T 1sby_A 128 GPGGIIANICSVTGFNAIH---------------------------------------QVPVYSASKAAVVSFTNSLAKL 168 (254)
T ss_dssp CCCEEEEEECCGGGTSCCT---------------------------------------TSHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECchhhccCCC---------------------------------------CchHHHHHHHHHHHHHHHHHHH
Confidence 35799999988764210 12469999999999987765
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
.|+.+++++||.|.++.......|... ...+..+.. ...+.+++|+|++++.++...
T Consensus 169 ~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~----~~~~~~~~~------------~~~~~~~~dvA~~i~~~~~~~---- 228 (254)
T 1sby_A 169 APITGVTAYSINPGITRTPLVHTFNSWLDV----EPRVAELLL------------SHPTQTSEQCGQNFVKAIEAN---- 228 (254)
T ss_dssp HHHHSEEEEEEEECSEESHHHHSCCCGGGS----CTTHHHHHT------------TSCCEEHHHHHHHHHHHHHHC----
T ss_pred hccCCeEEEEEecCCccCccccccchhhhh----hHHHHHHHh------------cCCCCCHHHHHHHHHHHHHcC----
Confidence 589999999999987642111111100 000111111 113348999999999887521
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCCCCCcccH
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSISSSYPITW 530 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~ 530 (596)
..|.+|++.+|...+++|
T Consensus 229 ---------------~~G~~~~v~gG~~~~~~~ 246 (254)
T 1sby_A 229 ---------------KNGAIWKLDLGTLEAIEW 246 (254)
T ss_dssp ---------------CTTCEEEEETTEEEECCC
T ss_pred ---------------CCCCEEEEeCCceeEecc
Confidence 358899998873333333
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=99.37 E-value=2.6e-12 Score=123.05 Aligned_cols=138 Identities=11% Similarity=0.120 Sum_probs=100.5
Q ss_pred EEEeccCCCCCCCCHHHHHHHhcc---ccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc-CCCceEE
Q psy5825 281 IISGDISQPSLGISSHDQQFIQHH---IHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC-SQLKAIL 349 (596)
Q Consensus 281 ~v~GDl~~~~lGL~~~~~~~l~~~---vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV 349 (596)
++.+|++++ +.+..+++. +|+||||||..... ..+...+.+|+.|+.+|+++|... ....+||
T Consensus 38 ~~~~D~~~~------~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~iv 111 (202)
T 3d7l_A 38 DVTVDITNI------DSIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGIDSLNDKGSFT 111 (202)
T ss_dssp SEECCTTCH------HHHHHHHHHHCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHTTTHHHHHHHHTTGGGEEEEEEEE
T ss_pred ceeeecCCH------HHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhccHHHHHHHHHHHHHhccCCEEE
Confidence 457888754 346666665 89999999965321 233457789999999999999873 1126999
Q ss_pred EecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----cCCCE
Q psy5825 350 HVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----YKLPL 425 (596)
Q Consensus 350 ~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----~gl~~ 425 (596)
++||.+++.... ....|+.||+..|.+++.++ .|+++
T Consensus 112 ~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~~~~~~~~~~~~e~~~gi~v 152 (202)
T 3d7l_A 112 LTTGIMMEDPIV---------------------------------------QGASAAMANGAVTAFAKSAAIEMPRGIRI 152 (202)
T ss_dssp EECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHTTSCSTTCEE
T ss_pred EEcchhhcCCCC---------------------------------------ccHHHHHHHHHHHHHHHHHHHHccCCeEE
Confidence 999987654210 12469999999999999877 38999
Q ss_pred EEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 426 AMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 426 ~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
+++|||.|+++.. .. + ......++++++|+|++++.++
T Consensus 153 ~~v~pg~v~~~~~------------------~~--~-------~~~~~~~~~~~~dva~~~~~~~ 190 (202)
T 3d7l_A 153 NTVSPNVLEESWD------------------KL--E-------PFFEGFLPVPAAKVARAFEKSV 190 (202)
T ss_dssp EEEEECCBGGGHH------------------HH--G-------GGSTTCCCBCHHHHHHHHHHHH
T ss_pred EEEecCccCCchh------------------hh--h-------hhccccCCCCHHHHHHHHHHhh
Confidence 9999999988521 00 0 1112357899999999998877
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.3e-11 Score=124.96 Aligned_cols=179 Identities=14% Similarity=0.094 Sum_probs=119.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 71 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 144 (281)
T 3s55_A 71 RRCISAKVDVKDRA------ALESFVAEAEDTLGGIDIAITNAGISTIALLPEVESAQWDEVIGTNLTGTFNTIAAVAPG 144 (281)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCTTCCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 67999999999653 3555554 78999999997542 2345668899999999999997431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.||+..+.+.+.+
T Consensus 145 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 185 (281)
T 3s55_A 145 MIKRNYGRIVTVSSMLGHSANF---------------------------------------AQASYVSSKWGVIGLTKCA 185 (281)
T ss_dssp HHHHTCEEEEEECCGGGGSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECChhhcCCCC---------------------------------------CCchhHHHHHHHHHHHHHH
Confidence 2457999999987654210 1246999999999999876
Q ss_pred h-----cCCCEEEecCCccccCCCCCcc---ccCCCCCCc-HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIV---GWSNNLYGP-GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~---G~~~~~~~~-~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
+ .|+++++++||.|+++...... .+...+..+ ..-+..... ........|++++|+|++++.++
T Consensus 186 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~p~dvA~~v~~L~ 258 (281)
T 3s55_A 186 AHDLVGYGITVNAVAPGNIETPMTHNDFVFGTMRPDLEKPTLKDVESVFA-------SLHLQYAPFLKPEEVTRAVLFLV 258 (281)
T ss_dssp HHHTGGGTEEEEEEEECSBCSTTTSSHHHHHC-------CCHHHHHHHHH-------HHCSSSCSCBCHHHHHHHHHHHH
T ss_pred HHHHhhcCcEEEEEecCcccCccccchhhhccccccccccchhHHHHHHH-------hhhccCcCCCCHHHHHHHHHHHc
Confidence 6 5899999999999987543210 000000000 000000000 01112257899999999999998
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|++|++.+|
T Consensus 259 s~~~~~----------------itG~~i~vdgG 275 (281)
T 3s55_A 259 DEASSH----------------ITGTVLPIDAG 275 (281)
T ss_dssp SGGGTT----------------CCSCEEEESTT
T ss_pred CCcccC----------------CCCCEEEECCC
Confidence 654321 36899999988
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.36 E-value=1.3e-11 Score=123.36 Aligned_cols=175 Identities=13% Similarity=0.027 Sum_probs=117.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||..... ..+...+.+|+.|+.+|+++|...
T Consensus 64 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 137 (265)
T 1h5q_A 64 VKTKAYQCDVSNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL 137 (265)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeeEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHhhhhHhHHHHHHHHHHH
Confidence 57899999999653 3555544 489999999975421 234568899999999999998652
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+|||+||..++....... .+ . . ....|+.||++.+.+++.
T Consensus 138 ~~~~~~~~~iv~~sS~~~~~~~~~~~----------------------------~~-~--~-~~~~Y~~sK~a~~~~~~~ 185 (265)
T 1h5q_A 138 WLQKQQKGSIVVTSSMSSQIINQSSL----------------------------NG-S--L-TQVFYNSSKAACSNLVKG 185 (265)
T ss_dssp HHHHTCCEEEEEECCGGGTSCCEEET----------------------------TE-E--C-SCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCceEEEeCCchhhccccccc----------------------------cc-c--c-cccccHHHHHHHHHHHHH
Confidence 2247899999987654211000 00 0 0 125699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|++++++|||.|+++.... . ...+...+.. .. + ...+++++|+|++++.++...
T Consensus 186 la~e~~~~gi~v~~v~Pg~v~t~~~~~-------~--~~~~~~~~~~-~~---~-----~~~~~~~~dva~~~~~l~~~~ 247 (265)
T 1h5q_A 186 LAAEWASAGIRVNALSPGYVNTDQTAH-------M--DKKIRDHQAS-NI---P-----LNRFAQPEEMTGQAILLLSDH 247 (265)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCGGGGG-------S--CHHHHHHHHH-TC---T-----TSSCBCGGGGHHHHHHHHSGG
T ss_pred HHHHHHhcCcEEEEEecCccccccccc-------c--chhHHHHHHh-cC---c-----ccCCCCHHHHHHHHHhhccCc
Confidence 65 48999999999998864311 0 1122111111 11 1 124788999999999988653
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.+|
T Consensus 248 ~~~----------------~~G~~~~v~gG 261 (265)
T 1h5q_A 248 ATY----------------MTGGEYFIDGG 261 (265)
T ss_dssp GTT----------------CCSCEEEECTT
T ss_pred hhc----------------CcCcEEEecCC
Confidence 321 35889999987
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=99.36 E-value=2.5e-11 Score=121.12 Aligned_cols=173 Identities=16% Similarity=0.072 Sum_probs=120.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh------hhhHHHHHHHHHHHHHHHHHHHHh--
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF------DELIQDAFTLNIQATRELLDLATR-- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~------~~~~~~~~~~NV~GT~~LL~~a~~-- 341 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+++|+.|+.+|++++..
T Consensus 61 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 134 (256)
T 3gaf_A 61 GKAIGLECNVTDEQ------HREAVIKAALDQFGKITVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHM 134 (256)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 57999999999653 3555554 68999999997542 134556889999999999999853
Q ss_pred -cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 -CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 -~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
..+..+||++||.+.+.... ....|+.||+..+.+++.++
T Consensus 135 ~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~la 175 (256)
T 3gaf_A 135 QKAGGGAILNISSMAGENTNV---------------------------------------RMASYGSSKAAVNHLTRNIA 175 (256)
T ss_dssp HHTTCEEEEEECCGGGTCCCT---------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEEcCHHHcCCCC---------------------------------------CchHHHHHHHHHHHHHHHHH
Confidence 13557999999988654210 12469999999999998766
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+.+++++||.|.++.... .. .......+.. ......+..++|+|++++.++.....
T Consensus 176 ~e~~~~gi~vn~v~PG~v~T~~~~~-------~~-~~~~~~~~~~---------~~p~~r~~~~~dva~~~~~L~s~~~~ 238 (256)
T 3gaf_A 176 FDVGPMGIRVNAIAPGAIKTDALAT-------VL-TPEIERAMLK---------HTPLGRLGEAQDIANAALFLCSPAAA 238 (256)
T ss_dssp HHHGGGTEEEEEEEECCBCCHHHHH-------HC-CHHHHHHHHT---------TCTTSSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHhhhCcEEEEEEEccccCchhhh-------cc-CHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcCCccc
Confidence 58999999999997642110 00 1111111111 11223578999999999998864332
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
. ..|++|++.+| ..++
T Consensus 239 ~----------------itG~~i~vdgG--~~~~ 254 (256)
T 3gaf_A 239 W----------------ISGQVLTVSGG--GVQE 254 (256)
T ss_dssp T----------------CCSCEEEESTT--SCCC
T ss_pred C----------------ccCCEEEECCC--cccc
Confidence 1 36899999998 4444
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-11 Score=124.04 Aligned_cols=180 Identities=12% Similarity=0.116 Sum_probs=116.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||..... ..+...+++|+.|+.+|++++...
T Consensus 76 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 149 (281)
T 3v2h_A 76 GTVLHHPADMTKPS------EIADMMAMVADRFGGADILVNNAGVQFVEKIEDFPVEQWDRIIAVNLSSSFHTIRGAIPP 149 (281)
T ss_dssp SCEEEECCCTTCHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57999999999653 4555554 689999999975321 234568899999999999998431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+.+.... ....|+.||++.+.+++.+
T Consensus 150 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 190 (281)
T 3v2h_A 150 MKKKGWGRIINIASAHGLVASP---------------------------------------FKSAYVAAKHGIMGLTKTV 190 (281)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECCcccccCCC---------------------------------------CchHHHHHHHHHHHHHHHH
Confidence 3457899999987654210 2246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++...... ........+. ....+............++.++|+|++++.++....
T Consensus 191 a~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~~~~~~~---~~~~~~~~~~~~~p~~r~~~~edvA~~v~~L~s~~a 264 (281)
T 3v2h_A 191 ALEVAESGVTVNSICPGYVLTPLVEKQI---PDQARTRGIT---EEQVINEVMLKGQPTKKFITVEQVASLALYLAGDDA 264 (281)
T ss_dssp HHHHGGGTEEEEEEEECSBCC----------------------------------CCTTCSCBCHHHHHHHHHHHHSSGG
T ss_pred HHHhhhcCcEEEEEECCCCcCcchhhhc---chhhhhcCCC---HHHHHHHHHHhcCCCCCccCHHHHHHHHHHHcCCCc
Confidence 5 5899999999999886432110 0000000000 000001112223344579999999999999886543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 265 ~~----------------itG~~i~vdGG 277 (281)
T 3v2h_A 265 AQ----------------ITGTHVSMDGG 277 (281)
T ss_dssp GG----------------CCSCEEEESTT
T ss_pred CC----------------CCCcEEEECCC
Confidence 21 36899999887
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=99.36 E-value=1.8e-11 Score=122.05 Aligned_cols=170 Identities=9% Similarity=0.003 Sum_probs=115.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ ++|+|||+||.... ...+...+.+|+.|+.++++++...
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 130 (261)
T 1gee_A 57 GEAIAVKGDVTVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130 (261)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 56889999999643 4555554 78999999997542 1234568899999999999887652
Q ss_pred ---CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+ ..+||++||...+.... ....|+.||++.+.++..
T Consensus 131 ~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 171 (261)
T 1gee_A 131 FVENDIKGTVINMSSVHEKIPWP---------------------------------------LFVHYAASKGGMKLMTET 171 (261)
T ss_dssp HHHTTCCCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCCEEEEeCCHHhcCCCC---------------------------------------CccHHHHHHHHHHHHHHH
Confidence 23 57999999987653210 224699999999988877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|++++++|||.|+++.... + .....+...+.. . . ....+++++|+|++++.++...
T Consensus 172 la~e~~~~gi~v~~v~Pg~v~t~~~~~---~----~~~~~~~~~~~~-~---~-----~~~~~~~~~dva~~~~~l~~~~ 235 (261)
T 1gee_A 172 LALEYAPKGIRVNNIGPGAINTPINAE---K----FADPEQRADVES-M---I-----PMGYIGEPEEIAAVAAWLASSE 235 (261)
T ss_dssp HHHHHGGGTCEEEEEEECSBCSGGGHH---H----HHSHHHHHHHHT-T---C-----TTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHhcccCeEEEEEeeCCcCCchhhh---c----ccChhHHHHHHh-c---C-----CCCCCcCHHHHHHHHHHHhCcc
Confidence 65 58999999999998863210 0 000111111111 0 1 1235789999999999988543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.++
T Consensus 236 ~~~----------------~~G~~~~v~gg 249 (261)
T 1gee_A 236 ASY----------------VTGITLFADGG 249 (261)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred ccC----------------CCCcEEEEcCC
Confidence 221 35889999887
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=99.36 E-value=1.1e-11 Score=123.61 Aligned_cols=176 Identities=12% Similarity=0.090 Sum_probs=116.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..+++ ++|+|||+||.... ...+..++.+|+.|+.++++++..
T Consensus 51 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 124 (255)
T 2q2v_A 51 VKAVHHPADLSDVA------QIEALFALAEREFGGVDILVNNAGIQHVAPVEQFPLESWDKIIALNLSAVFHGTRLALPG 124 (255)
T ss_dssp CCEEEECCCTTSHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999653 4666665 79999999997542 123556889999988887777642
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||.+++.... ....|+.||+..+.+++.+
T Consensus 125 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 165 (255)
T 2q2v_A 125 MRARNWGRIINIASVHGLVGST---------------------------------------GKAAYVAAKHGVVGLTKVV 165 (255)
T ss_dssp HHHTTCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEEcCchhccCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 14568999999988764210 1246999999999999876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHH---HhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGA---ALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~---~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+ .|+++++++||.|+++.... ........ .......+.........|++++|+|++++.++.
T Consensus 166 a~e~~~~gi~v~~v~Pg~v~t~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~dvA~~~~~l~s 235 (255)
T 2q2v_A 166 GLETATSNVTCNAICPGWVLTPLVQK----------QIDDRAANGGDPLQAQHDLLAEKQPSLAFVTPEHLGELVLFLCS 235 (255)
T ss_dssp HHHTTTSSEEEEEEEESSBCCHHHHH----------HHHHHHHHTCCHHHHHHHHHTTTCTTCCCBCHHHHHHHHHHHTS
T ss_pred HHHhcccCcEEEEEeeCCCcCcchhh----------hcccccccccchHHHHHHHHhccCCCCCCcCHHHHHHHHHHHhC
Confidence 5 58999999999998753110 00000000 000000000111223468999999999998875
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.++
T Consensus 236 ~~~~~----------------~tG~~~~vdgG 251 (255)
T 2q2v_A 236 EAGSQ----------------VRGAAWNVDGG 251 (255)
T ss_dssp GGGTT----------------CCSCEEEESTT
T ss_pred CccCC----------------CCCCEEEECCC
Confidence 43221 35889999887
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.3e-11 Score=122.58 Aligned_cols=172 Identities=9% Similarity=0.025 Sum_probs=116.3
Q ss_pred CcE-EEEEeccCCCCCCCCHHHHHHHh------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKV-HIISGDISQPSLGISSHDQQFIQ------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv-~~v~GDl~~~~lGL~~~~~~~l~------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++ .++.+|++++. .+..++ ..+|+|||+||..... ..+...+.+|+.|+.++++++...
T Consensus 57 ~~~~~~~~~D~~~~~------~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 130 (254)
T 2wsb_A 57 AAVAARIVADVTDAE------AMTAAAAEAEAVAPVSILVNSAGIARLHDALETDDATWRQVMAVNVDGMFWASRAFGRA 130 (254)
T ss_dssp GGEEEEEECCTTCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCBCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccceeEEEEecCCHH------HHHHHHHHHHhhCCCcEEEECCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 356 88999999653 355554 4789999999975431 234568899999988888776431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+++.... +. +...|+.||++.+.+++.+
T Consensus 131 ~~~~~~~~iv~isS~~~~~~~~------------------------------------~~-~~~~Y~~sK~a~~~~~~~~ 173 (254)
T 2wsb_A 131 MVARGAGAIVNLGSMSGTIVNR------------------------------------PQ-FASSYMASKGAVHQLTRAL 173 (254)
T ss_dssp HHHHTCEEEEEECCGGGTSCCS------------------------------------SS-CBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEecchhccCCC------------------------------------CC-cchHHHHHHHHHHHHHHHH
Confidence 3578999999988764211 00 1256999999999999876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++|||.|+++..... .....++..+..+ . ....+++++|+|++++.++....
T Consensus 174 ~~~~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~~----~-----~~~~~~~~~dva~~~~~l~~~~~ 237 (254)
T 2wsb_A 174 AAEWAGRGVRVNALAPGYVATEMTLKM-------RERPELFETWLDM----T-----PMGRCGEPSEIAAAALFLASPAA 237 (254)
T ss_dssp HHHHGGGTEEEEEEEECCBCSHHHHHH-------HTCHHHHHHHHHT----S-----TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhhcCeEEEEEEecccCchhhhcc-------ccChHHHHHHHhc----C-----CCCCCCCHHHHHHHHHHHhCccc
Confidence 5 489999999999988632110 0001122122111 1 12358899999999999885432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.++
T Consensus 238 ~~----------------~~G~~~~v~gG 250 (254)
T 2wsb_A 238 SY----------------VTGAILAVDGG 250 (254)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cc----------------ccCCEEEECCC
Confidence 21 35889999887
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=99.35 E-value=1.5e-11 Score=123.23 Aligned_cols=169 Identities=9% Similarity=-0.035 Sum_probs=115.5
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------h-----hhHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------D-----ELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~-----~~~~~~~~~NV~GT~~LL~~ 338 (596)
.+.++.+|++++. .+..+++ .+|+|||+||.... . ..+..++.+|+.|+.+|+++
T Consensus 60 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 133 (265)
T 1qsg_A 60 SDIVLQCDVAEDA------SIDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKA 133 (265)
T ss_dssp CCCEEECCTTCHH------HHHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CcEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCccccCCCccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 3478899999653 4565554 68999999997542 1 23456889999999999999
Q ss_pred HHhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 339 ATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 339 a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
+... ....+||++||.+.+.... ....|+.||+..+.+++
T Consensus 134 ~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~ 174 (265)
T 1qsg_A 134 CRSMLNPGSALLTLSYLGAERAIP---------------------------------------NYNVMGLAKASLEANVR 174 (265)
T ss_dssp HGGGEEEEEEEEEEECGGGTSBCT---------------------------------------TTTHHHHHHHHHHHHHH
T ss_pred HHHHhccCCEEEEEcchhhccCCC---------------------------------------CchHHHHHHHHHHHHHH
Confidence 9862 1125899999987653210 12469999999999998
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++ .|+++++++||.|+++.... ......++..+..+. + ...+++++|+|++++.++..
T Consensus 175 ~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~~----p-----~~~~~~~~dva~~v~~l~s~ 238 (265)
T 1qsg_A 175 YMANAMGPEGVRVNAISAGPIRTLAASG-------IKDFRKMLAHCEAVT----P-----IRRTVTIEDVGNSAAFLCSD 238 (265)
T ss_dssp HHHHHHTTTTEEEEEEEECCCCCTTGGG-------STTHHHHHHHHHHHS----T-----TSSCCCHHHHHHHHHHHTSG
T ss_pred HHHHHhhhcCeEEEEEEeCCCccchhhc-------ccccHHHHHHHHhcC----C-----CCCCCCHHHHHHHHHHHhCc
Confidence 765 48999999999998864311 111112222221111 1 12467899999999988754
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|++|++.++
T Consensus 239 ~~~~----------------~tG~~~~vdgG 253 (265)
T 1qsg_A 239 LSAG----------------ISGEVVHVDGG 253 (265)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred hhcC----------------ccCCEEEECCC
Confidence 3221 35889999887
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.34 E-value=3.1e-11 Score=119.62 Aligned_cols=168 Identities=10% Similarity=0.028 Sum_probs=113.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC---S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~---~ 343 (596)
.++.++.+|+++.. .+..+++ ++|+|||+||..... ..+..++++|+.|+.+|++++... .
T Consensus 60 ~~~~~~~~D~~~~~------~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~ 133 (249)
T 3f9i_A 60 DNYTIEVCNLANKE------ECSNLISKTSNLDILVCNAGITSDTLAIRMKDQDFDKVIDINLKANFILNREAIKKMIQK 133 (249)
T ss_dssp SSEEEEECCTTSHH------HHHHHHHTCSCCSEEEECCC-------------CHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred cCccEEEcCCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhC
Confidence 67899999999643 4666665 689999999976421 345678999999999999988531 3
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
+..+||++||.+++.... ....|+.||++.+.+++.++
T Consensus 134 ~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~e~ 174 (249)
T 3f9i_A 134 RYGRIINISSIVGIAGNP---------------------------------------GQANYCASKAGLIGMTKSLSYEV 174 (249)
T ss_dssp TCEEEEEECCCCC--CCS---------------------------------------CSHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEccHHhccCCC---------------------------------------CCchhHHHHHHHHHHHHHHHHHH
Confidence 457999999988764211 22469999999998887765
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
.|+.+++++||.|.++.... + .......+..+ .....+++++|+|++++.++......
T Consensus 175 ~~~gi~v~~v~PG~v~t~~~~~-------~--~~~~~~~~~~~---------~~~~~~~~~~dva~~~~~l~s~~~~~-- 234 (249)
T 3f9i_A 175 ATRGITVNAVAPGFIKSDMTDK-------L--NEKQREAIVQK---------IPLGTYGIPEDVAYAVAFLASNNASY-- 234 (249)
T ss_dssp GGGTEEEEEEEECCBC-------------C--CHHHHHHHHHH---------CTTCSCBCHHHHHHHHHHHHSGGGTT--
T ss_pred HHcCcEEEEEecCccccCcccc-------c--CHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCCccCC--
Confidence 68999999999997764311 1 11121111111 12246788999999999988654321
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++|++.+|
T Consensus 235 --------------~tG~~~~vdgG 245 (249)
T 3f9i_A 235 --------------ITGQTLHVNGG 245 (249)
T ss_dssp --------------CCSCEEEESTT
T ss_pred --------------ccCcEEEECCC
Confidence 36899999887
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=99.34 E-value=1.2e-11 Score=123.56 Aligned_cols=171 Identities=15% Similarity=0.107 Sum_probs=116.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..++ ..+|+|||+||.... ...+..++++|+.|+.+++++|..
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 131 (260)
T 2ae2_A 58 FKVEASVCDLSSRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 131 (260)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 47889999999653 355555 569999999997532 123556889999999999999853
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||.+++.... ....|+.||+..+.+++.
T Consensus 132 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 172 (260)
T 2ae2_A 132 FLKASERGNVVFISSVSGALAVP---------------------------------------YEAVYGATKGAMDQLTRC 172 (260)
T ss_dssp HHHHTSSEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEcchhhccCCC---------------------------------------CcchHHHHHHHHHHHHHH
Confidence 13568999999987654210 124699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcH--HHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPG--GAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~--~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
++ .|+.+++++||.|.++... .+. ..+. ..+..+.. ......+++++|+|++++.++.
T Consensus 173 la~e~~~~gi~v~~v~Pg~v~t~~~~---~~~---~~~~~~~~~~~~~~---------~~~~~~~~~~~dvA~~v~~l~s 237 (260)
T 2ae2_A 173 LAFEWAKDNIRVNGVGPGVIATSLVE---MTI---QDPEQKENLNKLID---------RCALRRMGEPKELAAMVAFLCF 237 (260)
T ss_dssp HHHHTGGGTEEEEEEEECSBCSHHHH---HHT---TSHHHHHHHHHHHH---------TSTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHhhcCcEEEEEecCCCCCcchh---hhc---cChhhHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHcC
Confidence 76 5899999999999765311 000 0000 00001111 1112358899999999998875
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.+|
T Consensus 238 ~~~~~----------------~tG~~~~vdgG 253 (260)
T 2ae2_A 238 PAASY----------------VTGQIIYVDGG 253 (260)
T ss_dssp GGGTT----------------CCSCEEEESTT
T ss_pred ccccC----------------CCCCEEEECCC
Confidence 43221 35889999887
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=99.34 E-value=1.1e-11 Score=122.25 Aligned_cols=168 Identities=11% Similarity=0.053 Sum_probs=112.3
Q ss_pred CcEEE-EEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHI-ISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~-v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.+ +.+|++++. .+..++ .++|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 51 ~~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~d~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~ 124 (245)
T 2ph3_A 51 SPLVAVLGANLLEAE------AATALVHQAAEVLGGLDTLVNNAGITRDTLLVRMKDEDWEAVLEANLSAVFRTTREAVK 124 (245)
T ss_dssp CSCEEEEECCTTSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEeccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHH
Confidence 35666 899999643 355553 378999999997542 123456889999996666655532
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||...+.... ....|+.||++.+.+++.
T Consensus 125 ~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 165 (245)
T 2ph3_A 125 LMMKARFGRIVNITSVVGILGNP---------------------------------------GQANYVASKAGLIGFTRA 165 (245)
T ss_dssp HHHHHTCEEEEEECCTHHHHCCS---------------------------------------SBHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCEEEEEeChhhccCCC---------------------------------------CCcchHHHHHHHHHHHHH
Confidence 1 3578999999986543210 124699999999988877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|++++++|||.|+++... .. +..+...+..+ .+ ...+++++|+|++++.++...
T Consensus 166 la~e~~~~gi~v~~v~Pg~v~t~~~~-------~~--~~~~~~~~~~~----~~-----~~~~~~~~dva~~~~~l~~~~ 227 (245)
T 2ph3_A 166 VAKEYAQRGITVNAVAPGFIETEMTE-------RL--PQEVKEAYLKQ----IP-----AGRFGRPEEVAEAVAFLVSEK 227 (245)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCHHHH-------TS--CHHHHHHHHHT----CT-----TCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHHcCeEEEEEEEEeecCcchh-------hc--CHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhCcc
Confidence 65 4899999999999876321 11 11222222111 11 235789999999999887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.++
T Consensus 228 ~~~----------------~~G~~~~v~gg 241 (245)
T 2ph3_A 228 AGY----------------ITGQTLCVDGG 241 (245)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred ccc----------------ccCCEEEECCC
Confidence 221 35889999887
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.34 E-value=1.6e-11 Score=121.09 Aligned_cols=145 Identities=15% Similarity=0.162 Sum_probs=107.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||...+. ..+...+.+|+.|+.+|++++...
T Consensus 58 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 131 (244)
T 2bd0_A 58 ALTDTITADISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 131 (244)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeeeEEEecCCCHH------HHHHHHHHHHHhCCCCCEEEEcCCcCCcCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999653 3555554 699999999976421 245568899999999999998531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+++.... ....|+.||++.+.+++.+
T Consensus 132 ~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 172 (244)
T 2bd0_A 132 MERQHSGHIFFITSVAATKAFR---------------------------------------HSSIYCMSKFGQRGLVETM 172 (244)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCEEEEEecchhcCCCC---------------------------------------CCchhHHHHHHHHHHHHHH
Confidence 2568999999998765210 2246999999999998665
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+ .|++++++|||.|+++..... ... . ...+++++|+|++++.++...
T Consensus 173 a~e~~~~gi~v~~v~Pg~v~t~~~~~~-------~~~------------------~--~~~~~~~~dva~~~~~l~~~~ 224 (244)
T 2bd0_A 173 RLYARKCNVRITDVQPGAVYTPMWGKV-------DDE------------------M--QALMMMPEDIAAPVVQAYLQP 224 (244)
T ss_dssp HHHHTTTTEEEEEEEECCBCSTTTCCC-------CST------------------T--GGGSBCHHHHHHHHHHHHTSC
T ss_pred HHHhhccCcEEEEEECCCccchhhhhc-------ccc------------------c--cccCCCHHHHHHHHHHHHhCC
Confidence 4 689999999999988643210 000 0 125889999999999988643
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=99.33 E-value=1.3e-11 Score=123.41 Aligned_cols=174 Identities=10% Similarity=0.076 Sum_probs=118.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..+++ ++|+|||+||...+ ...+..++++|+.|+.++++++..
T Consensus 63 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~ 136 (260)
T 2zat_A 63 LSVTGTVCHVGKAE------DRERLVAMAVNLHGGVDILVSNAAVNPFFGNIIDATEEVWDKILHVNVKATVLMTKAVVP 136 (260)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 46889999999643 3555544 79999999997431 123456889999999999998853
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||..++.... ....|+.||+..+.+++.
T Consensus 137 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 177 (260)
T 2zat_A 137 EMEKRGGGSVLIVSSVGAYHPFP---------------------------------------NLGPYNVSKTALLGLTKN 177 (260)
T ss_dssp HHHHTTCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEechhhcCCCC---------------------------------------CchhHHHHHHHHHHHHHH
Confidence 13568999999998765311 124699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.|.++.... .|. .......+..+ . ....+++++|+|++++.++...
T Consensus 178 la~e~~~~gi~v~~v~Pg~v~t~~~~~--~~~-----~~~~~~~~~~~----~-----~~~~~~~~~dva~~v~~l~s~~ 241 (260)
T 2zat_A 178 LAVELAPRNIRVNCLAPGLIKTNFSQV--LWM-----DKARKEYMKES----L-----RIRRLGNPEDCAGIVSFLCSED 241 (260)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSSTTHH--HHS-----SHHHHHHHHHH----H-----TCSSCBCGGGGHHHHHHHTSGG
T ss_pred HHHHhcccCeEEEEEEECcccCccchh--ccc-----ChHHHHHHHhc----C-----CCCCCCCHHHHHHHHHHHcCcc
Confidence 65 58999999999997753210 010 00111111110 1 1135789999999998887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
... ..|++|++.+| ..++
T Consensus 242 ~~~----------------~tG~~~~vdgG--~~~s 259 (260)
T 2zat_A 242 ASY----------------ITGETVVVGGG--TASR 259 (260)
T ss_dssp GTT----------------CCSCEEEESTT--CCCC
T ss_pred cCC----------------ccCCEEEECCC--cccc
Confidence 221 35889999998 5544
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=2.4e-11 Score=121.59 Aligned_cols=169 Identities=14% Similarity=0.119 Sum_probs=115.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccC--C---h----hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASL--R---F----DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v--~---~----~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.. . + ...+...+++|+.|+.+|++++.
T Consensus 57 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 130 (264)
T 3i4f_A 57 ERLQFVQADVTKKE------DLHKIVEEAMSHFGKIDFLINNAGPYVFERKKLVDYEEDEWNEMIQGNLTAVFHLLKLVV 130 (264)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCSCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCCccccCCHHHHHHHHHhccHHHHHHHHHHH
Confidence 57999999999654 3555554 789999999942 1 1 12345688999999999999983
Q ss_pred ----hcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 341 ----RCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 341 ----~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
. .+..+||++||.++++.... . ....|+.||++.+.++
T Consensus 131 ~~~~~-~~~g~iv~iss~~~~~~~~~------------------------------------~-~~~~Y~asKaa~~~~~ 172 (264)
T 3i4f_A 131 PVMRK-QNFGRIINYGFQGADSAPGW------------------------------------I-YRSAFAAAKVGLVSLT 172 (264)
T ss_dssp HHHHH-HTCEEEEEECCTTGGGCCCC------------------------------------T-TCHHHHHHHHHHHHHH
T ss_pred HHHHh-cCCCeEEEEeechhcccCCC------------------------------------C-CCchhHHHHHHHHHHH
Confidence 3 35679999999865532110 0 2256999999999998
Q ss_pred HHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+.++ .|+++++++||.|+++.... ...-... ...... ....++.++|+|++++.++.
T Consensus 173 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~----------~~~~~~~---~~~~~~-----p~~r~~~~~dva~~v~~l~s 234 (264)
T 3i4f_A 173 KTVAYEEAEYGITANMVCPGDIIGEMKEA----------TIQEARQ---LKEHNT-----PIGRSGTGEDIARTISFLCE 234 (264)
T ss_dssp HHHHHHHGGGTEEEEEEEECCCCGGGGSC----------CHHHHHH---C-------------CCCCHHHHHHHHHHHHS
T ss_pred HHHHHHhhhcCcEEEEEccCCccCccchh----------ccHHHHH---HHhhcC-----CCCCCcCHHHHHHHHHHHcC
Confidence 7765 68999999999998864321 1111111 111111 12347889999999999886
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.+|
T Consensus 235 ~~~~~----------------itG~~i~vdGG 250 (264)
T 3i4f_A 235 DDSDM----------------ITGTIIEVTGA 250 (264)
T ss_dssp GGGTT----------------CCSCEEEESCS
T ss_pred cccCC----------------CCCcEEEEcCc
Confidence 54321 36899999988
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.5e-11 Score=121.40 Aligned_cols=175 Identities=13% Similarity=0.063 Sum_probs=116.5
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
++.++.+|++++. .+..+++ ++|+|||+||..... ..+...+.+|+.|+.++++++...
T Consensus 59 ~~~~~~~D~~d~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~ 132 (263)
T 3ak4_A 59 GGFAVEVDVTKRA------SVDAAMQKAIDALGGFDLLCANAGVSTMRPAVDITDEEWDFNFDVNARGVFLANQIACRHF 132 (263)
T ss_dssp CCEEEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCeEEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHH
Confidence 6889999999643 4666655 799999999975421 235568899999999999988642
Q ss_pred --CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 --SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 --~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+ ..+||++||..++.... ....|+.||+..+.+++.+
T Consensus 133 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 173 (263)
T 3ak4_A 133 LASNTKGVIVNTASLAAKVGAP---------------------------------------LLAHYSASKFAVFGWTQAL 173 (263)
T ss_dssp HHTTCCCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCeEEEEecccccccCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 23 57999999987653210 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCcccc---CCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGW---SNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~---~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+ .|++++++|||.|+++.......+ ... .....+...+.. ......+++++|+|++++.++.
T Consensus 174 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~-~~~~~~~~~~~~---------~~p~~~~~~~~dvA~~v~~l~s 243 (263)
T 3ak4_A 174 AREMAPKNIRVNCVCPGFVKTAMQEREIIWEAELRG-MTPEAVRAEYVS---------LTPLGRIEEPEDVADVVVFLAS 243 (263)
T ss_dssp HHHHGGGTCEEEEEEECSBTTHHHHHHHHHHHHHHT-SCHHHHHHHHHH---------TCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHhHcCeEEEEEecccccChhhhhhccccccccc-cCcHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhC
Confidence 5 589999999999987532100000 000 000001111111 1112358899999999999886
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.+|
T Consensus 244 ~~~~~----------------~tG~~~~vdgG 259 (263)
T 3ak4_A 244 DAARF----------------MTGQGINVTGG 259 (263)
T ss_dssp GGGTT----------------CCSCEEEESSS
T ss_pred ccccC----------------CCCCEEEECcC
Confidence 53321 35889999887
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.33 E-value=2.3e-11 Score=122.71 Aligned_cols=181 Identities=10% Similarity=0.026 Sum_probs=120.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhc----
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRC---- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~---- 342 (596)
.++.++.+||+++. .+..+++ .+|+|||+||...+. ..+..++++|+.|+.+|++++...
T Consensus 74 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~ 147 (278)
T 3sx2_A 74 SRIVARQADVRDRE------SLSAALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQ 147 (278)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 68999999999654 4665554 789999999986533 345678999999999999998641
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
....+||++||.+.+..... + .+ ....|+.||++.+.+++.++
T Consensus 148 ~~~g~iv~isS~~~~~~~~~------~---~~--------------------------~~~~Y~asKaa~~~~~~~la~e 192 (278)
T 3sx2_A 148 GTGGSIVLISSSAGLAGVGS------A---DP--------------------------GSVGYVAAKHGVVGLMRVYANL 192 (278)
T ss_dssp CSCEEEEEECCGGGTSCCCC------S---SH--------------------------HHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEccHHhcCCCcc------C---CC--------------------------CchHhHHHHHHHHHHHHHHHHH
Confidence 22468999999876542110 0 00 11359999999999988765
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhc-cceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALG-LIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g-~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+++++++||.|.++..... .....+...... ......+.... ..++.++|+|++++.++......
T Consensus 193 ~~~~gi~vn~v~PG~v~T~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~p-~~~~~p~dvA~~v~~l~s~~~~~ 263 (278)
T 3sx2_A 193 LAGQMIRVNSIHPSGVETPMINNE--------FTREWLAKMAAATDTPGAMGNAMP-VEVLAPEDVANAVAWLVSDQARY 263 (278)
T ss_dssp HGGGTEEEEEEEESCBSSTTTSSH--------HHHHHHHHHHHHCC--CTTSCSSS-CSSBCHHHHHHHHHHHTSGGGTT
T ss_pred HhccCcEEEEEecCCccCccchhh--------hHHHHHhhccchhhhhhhhhhhcC-cCcCCHHHHHHHHHHHhCccccc
Confidence 689999999999987643210 001111111110 00011122222 57889999999999888643321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++|++.+|
T Consensus 264 ----------------itG~~i~vdGG 274 (278)
T 3sx2_A 264 ----------------ITGVTLPVDAG 274 (278)
T ss_dssp ----------------CCSCEEEESTT
T ss_pred ----------------ccCCEEeECCC
Confidence 36899999887
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.33 E-value=4.3e-11 Score=120.39 Aligned_cols=170 Identities=17% Similarity=0.132 Sum_probs=112.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+||...+ ...+...+++|+.|+.+|++++..
T Consensus 76 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 149 (272)
T 4e3z_A 76 GEAVAIPGDVGNAA------DIAAMFSAVDRQFGRLDGLVNNAGIVDYPQRVDEMSVERIERMLRVNVTGSILCAAEAVR 149 (272)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHH
Confidence 57999999999653 3555544 67999999998643 123456899999999999999875
Q ss_pred c------CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 342 C------SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 342 ~------~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
. .+..+||++||.+++.... . ....|+.||++.+.+
T Consensus 150 ~~~~~~~~~~g~iv~isS~~~~~~~~-------------------------------------~-~~~~Y~asKaa~~~~ 191 (272)
T 4e3z_A 150 RMSRLYSGQGGAIVNVSSMAAILGSA-------------------------------------T-QYVDYAASKAAIDTF 191 (272)
T ss_dssp HHCGGGTCCCEEEEEECCTHHHHCCT-------------------------------------T-TCHHHHHHHHHHHHH
T ss_pred HHHHhccCCCCEEEEEcchHhccCCC-------------------------------------C-CcchhHHHHHHHHHH
Confidence 2 1356899999987653210 0 113599999999999
Q ss_pred HHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 416 VEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 416 v~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
++.++ .|+++++++||.|.++.... ......+..+. .......+..++|+|++++.++
T Consensus 192 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~--------~~~~~~~~~~~---------~~~~~~~~~~~edvA~~i~~l~ 254 (272)
T 4e3z_A 192 TIGLAREVAAEGIRVNAVRPGIIETDLHAS--------GGLPDRAREMA---------PSVPMQRAGMPEEVADAILYLL 254 (272)
T ss_dssp HHHHHHHHGGGTEEEEEEEECSBC-----------------------------------CCTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHcCcEEEEEecCCCcCCcccc--------cCChHHHHHHh---------hcCCcCCCcCHHHHHHHHHHHh
Confidence 87765 58999999999998764311 00001111111 1112234677999999999988
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|++|++.+|
T Consensus 255 s~~~~~----------------~tG~~i~vdgG 271 (272)
T 4e3z_A 255 SPSASY----------------VTGSILNVSGG 271 (272)
T ss_dssp SGGGTT----------------CCSCEEEESTT
T ss_pred CCcccc----------------ccCCEEeecCC
Confidence 643321 36899999876
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.33 E-value=4.1e-11 Score=121.14 Aligned_cols=175 Identities=15% Similarity=0.127 Sum_probs=118.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||...+. ..+...+++|+.|+.++++++...
T Consensus 77 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 150 (280)
T 3pgx_A 77 RKALTRVLDVRDDA------ALRELVADGMEQFGRLDVVVANAGVLSWGRVWELTDEQWDTVIGVNLTGTWRTLRATVPA 150 (280)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHH
Confidence 57899999999654 3555554 689999999986421 234568899999999999998541
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||...+.... ....|+.||+..+.+++.
T Consensus 151 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~ 191 (280)
T 3pgx_A 151 MIEAGNGGSIVVVSSSAGLKATP---------------------------------------GNGHYSASKHGLTALTNT 191 (280)
T ss_dssp HHHHCSCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEEcchhhccCCC---------------------------------------CchhHHHHHHHHHHHHHH
Confidence 2256899999987654211 124699999999998887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhc--cceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALG--LIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g--~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
++ .|+++++++||.|.++...+ ..+...+... ....+........-|+.++|+|++++.++.
T Consensus 192 la~e~~~~gi~vn~v~PG~v~t~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~r~~~p~dvA~~v~~L~s 260 (280)
T 3pgx_A 192 LAIELGEYGIRVNSIHPYSVETPMIEP-----------EAMMEIFARHPSFVHSFPPMPVQPNGFMTADEVADVVAWLAG 260 (280)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSTTCCH-----------HHHHHHHHHCGGGGGGSCCBTTBCSSCBCHHHHHHHHHHHHS
T ss_pred HHHHhhhcCeEEEEEeeCcccCcccch-----------hhhhhhhhcCchhhhhhhhcccCCCCCCCHHHHHHHHHHHhC
Confidence 65 68999999999998864311 1111111110 000111111111248899999999999886
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.+|
T Consensus 261 ~~~~~----------------itG~~i~vdGG 276 (280)
T 3pgx_A 261 DGSGT----------------LTGTQIPVDKG 276 (280)
T ss_dssp GGGTT----------------CSSCEEEESTT
T ss_pred ccccC----------------CCCCEEEECCC
Confidence 54321 36899999887
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=3e-11 Score=120.47 Aligned_cols=174 Identities=13% Similarity=0.072 Sum_probs=115.1
Q ss_pred EEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---
Q psy5825 280 HIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC--- 342 (596)
Q Consensus 280 ~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~--- 342 (596)
.++.+|++++. ++..+++ .+|+|||+||..... ..+...+.+|+.|+.+++++|...
T Consensus 52 ~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~~ 125 (256)
T 2d1y_A 52 AFFQVDLEDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRK 125 (256)
T ss_dssp EEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHT
T ss_pred CEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh
Confidence 78899999653 3555543 689999999975421 235668899999999999988641
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
.+..+||++||.+.+.... ....|+.||+..+.+++.++
T Consensus 126 ~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~e 166 (256)
T 2d1y_A 126 VGGGAIVNVASVQGLFAEQ---------------------------------------ENAAYNASKGGLVNLTRSLALD 166 (256)
T ss_dssp TTCEEEEEECCGGGTSBCT---------------------------------------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCcEEEEEccccccCCCC---------------------------------------CChhHHHHHHHHHHHHHHHHHH
Confidence 3568999999987653210 12469999999999988765
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHH-hccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAA-LGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~-~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+.+++++||.|.++... .++.... ................+++++|+|++++.++......
T Consensus 167 ~~~~gi~v~~v~Pg~v~t~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dvA~~~~~l~s~~~~~ 233 (256)
T 2d1y_A 167 LAPLRIRVNAVAPGAIATEAVL-------------EAIALSPDPERTRRDWEDLHALRRLGKPEEVAEAVLFLASEKASF 233 (256)
T ss_dssp HGGGTEEEEEEEECSBCCHHHH-------------HHHC--------CHHHHTTSTTSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HhhcCeEEEEEeeCCccCchhh-------------hccccccCCHHHHHHHHhcCCCCCCcCHHHHHHHHHHHhCchhcC
Confidence 5899999999999664210 0000000 0000000011112346899999999999988653321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
..|++|++.++ ..++
T Consensus 234 ----------------~~G~~~~v~gG--~~~~ 248 (256)
T 2d1y_A 234 ----------------ITGAILPVDGG--MTAS 248 (256)
T ss_dssp ----------------CCSCEEEESTT--GGGB
T ss_pred ----------------CCCCEEEECCC--cccc
Confidence 35889999988 4444
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.32 E-value=8.5e-11 Score=118.29 Aligned_cols=169 Identities=15% Similarity=0.084 Sum_probs=118.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh---------hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF---------DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~---------~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+++|+.|+.++++++.
T Consensus 57 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 130 (271)
T 3tzq_B 57 RGAVHHVVDLTNEV------SVRALIDFTIDTFGRLDIVDNNAAHSDPADMLVTQMTVDVWDDTFTVNARGTMLMCKYAI 130 (271)
T ss_dssp TTCEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 57889999999653 4666654 78999999997632 12345689999999999999984
Q ss_pred h---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 341 R---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 341 ~---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
. ..+..+||++||..++.... ....|+.||+..+.+++
T Consensus 131 ~~m~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~ 171 (271)
T 3tzq_B 131 PRLISAGGGAIVNISSATAHAAYD---------------------------------------MSTAYACTKAAIETLTR 171 (271)
T ss_dssp HHHHHTTCEEEEEECCGGGTSBCS---------------------------------------SCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCCEEEEECCHHHcCCCC---------------------------------------CChHHHHHHHHHHHHHH
Confidence 2 14567999999988764211 22469999999999988
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++ .|+++++++||.|+++.... . ....+...+... . ...-+..++|+|++++.++..
T Consensus 172 ~la~e~~~~gi~vn~v~PG~v~t~~~~~------~--~~~~~~~~~~~~-~--------~~~r~~~p~dvA~~v~~L~s~ 234 (271)
T 3tzq_B 172 YVATQYGRHGVRCNAIAPGLVRTPRLEV------G--LPQPIVDIFATH-H--------LAGRIGEPHEIAELVCFLASD 234 (271)
T ss_dssp HHHHHHGGGTEEEEEEEECCBCCTTTC-----------CHHHHHHHHTT-S--------TTSSCBCHHHHHHHHHHHHSG
T ss_pred HHHHHHhhcCEEEEEEEeCCCcCccccc------c--CCHHHHHHHHhc-C--------CCCCCcCHHHHHHHHHHHhCc
Confidence 765 68999999999998864321 0 112222222211 1 112367899999999998865
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|+++++.+|
T Consensus 235 ~~~~----------------itG~~i~vdGG 249 (271)
T 3tzq_B 235 RAAF----------------ITGQVIAADSG 249 (271)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred ccCC----------------cCCCEEEECCC
Confidence 4321 36899999887
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2e-11 Score=124.38 Aligned_cols=169 Identities=12% Similarity=0.057 Sum_probs=117.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 97 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 170 (291)
T 3ijr_A 97 VKCVLLPGDLSDEQ------HCKDIVQETVRQLGSLNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALS 170 (291)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHT
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57999999999653 3555544 68999999997532 123566899999999999999986
Q ss_pred c-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 C-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 ~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
. ....+||++||+.++.... ....|+.||+..+.+++.++
T Consensus 171 ~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~la 211 (291)
T 3ijr_A 171 HLKQGDVIINTASIVAYEGNE---------------------------------------TLIDYSATKGAIVAFTRSLS 211 (291)
T ss_dssp TCCTTCEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HHhhCCEEEEEechHhcCCCC---------------------------------------CChhHHHHHHHHHHHHHHHH
Confidence 2 2345899999988764211 12469999999999998766
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+.+++++||.|+++... .. . ....+..+ ........+..++|+|++++.++.....
T Consensus 212 ~e~~~~gi~vn~v~PG~v~T~~~~---~~----~-~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L~s~~~~ 274 (291)
T 3ijr_A 212 QSLVQKGIRVNGVAPGPIWTPLIP---SS----F-DEKKVSQF---------GSNVPMQRPGQPYELAPAYVYLASSDSS 274 (291)
T ss_dssp HHHGGGTCEEEEEEECSBCSTHHH---HH----S-CHHHHHHT---------TTTSTTSSCBCGGGTHHHHHHHHSGGGT
T ss_pred HHHhhcCEEEEEEeeCCCcCCccc---cc----C-CHHHHHHH---------HccCCCCCCcCHHHHHHHHHHHhCCccC
Confidence 5899999999999775310 00 0 01111111 1112234577899999999998865432
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|++|++.+|
T Consensus 275 ~----------------itG~~i~vdGG 286 (291)
T 3ijr_A 275 Y----------------VTGQMIHVNGG 286 (291)
T ss_dssp T----------------CCSCEEEESSS
T ss_pred C----------------CcCCEEEECCC
Confidence 1 36899999887
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1e-11 Score=125.45 Aligned_cols=177 Identities=11% Similarity=0.033 Sum_probs=115.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ ++|+|||+||..... ..+..++.+|+.|+.++++++...
T Consensus 71 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 144 (277)
T 2rhc_B 71 VEADGRTCDVRSVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 144 (277)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhCh
Confidence 56899999999653 4555554 689999999975321 234568899999999999998762
Q ss_pred -----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 343 -----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 343 -----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
.+..+||++||.+.+.... ....|+.||+..+.+++
T Consensus 145 ~~m~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~ 185 (277)
T 2rhc_B 145 GGMLERGTGRIVNIASTGGKQGVV---------------------------------------HAAPYSASKHGVVGFTK 185 (277)
T ss_dssp TCHHHHTEEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred hhHhhcCCeEEEEECccccccCCC---------------------------------------CCccHHHHHHHHHHHHH
Confidence 1357999999987643210 12469999999999988
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccc-cCCCCCCc-HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVG-WSNNLYGP-GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G-~~~~~~~~-~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
.++ .|+++++++||.|.++....... +....... ...+..+.. ......+++++|+|++++.++
T Consensus 186 ~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~~~dvA~~v~~l~ 256 (277)
T 2rhc_B 186 ALGLELARTGITVNAVCPGFVETPMAASVREHYSDIWEVSTEEAFDRITA---------RVPIGRYVQPSEVAEMVAYLI 256 (277)
T ss_dssp HHHHHHTTTEEEEEEEEECSBCSHHHHHHHHHHHHHHTCCHHHHHHHHHH---------HSTTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHhCcEEEEEecCcCcCchhhhhhhhcccccccchHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHh
Confidence 765 58999999999997752100000 00000000 000000110 011235889999999999888
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|++|++.+|
T Consensus 257 s~~~~~----------------~tG~~~~vdGG 273 (277)
T 2rhc_B 257 GPGAAA----------------VTAQALNVCGG 273 (277)
T ss_dssp SGGGTT----------------CCSCEEEESTT
T ss_pred CchhcC----------------CCCcEEEECCC
Confidence 543321 36889999887
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.32 E-value=2.3e-11 Score=121.31 Aligned_cols=167 Identities=12% Similarity=0.130 Sum_probs=113.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.+++++
T Consensus 53 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 126 (257)
T 3tpc_A 53 AAVRFRNADVTNEA------DATAALAFAKQEFGHVHGLVNCAGTAPGEKILGRSGPHALDSFARTVAVNLIGTFNMIRL 126 (257)
T ss_dssp --CEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTEECCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCccccccccCCHHHHHHHHHHHhHHHHHHHHH
Confidence 46889999999653 4555554 78999999997632 134566889999999999999
Q ss_pred HHhc---------CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHH
Q psy5825 339 ATRC---------SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTK 409 (596)
Q Consensus 339 a~~~---------~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK 409 (596)
+... .+..+||++||.+.+.... ....|+.||
T Consensus 127 ~~~~m~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK 167 (257)
T 3tpc_A 127 AAEVMSQGEPDADGERGVIVNTASIAAFDGQI---------------------------------------GQAAYAASK 167 (257)
T ss_dssp HHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHH
T ss_pred HHHHHHhccccCCCCCeEEEEEechhhccCCC---------------------------------------CCcchHHHH
Confidence 9752 1346899999988654210 124699999
Q ss_pred HHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHH
Q psy5825 410 AIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATN 484 (596)
Q Consensus 410 ~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~ 484 (596)
+..+.+++.++ .|+++++++||.|.++.....+ ..+. ..... ..+ ....+..++|+|+
T Consensus 168 aa~~~~~~~la~e~~~~gi~vn~v~PG~v~t~~~~~~~---------~~~~-~~~~~---~~p----~~~r~~~~~dva~ 230 (257)
T 3tpc_A 168 GGVAALTLPAARELARFGIRVVTIAPGIFDTPMMAGMP---------QDVQ-DALAA---SVP----FPPRLGRAEEYAA 230 (257)
T ss_dssp HHHHHHHHHHHHHHGGGTEEEEEEEECCBSCC------------------------C---CSS----SSCSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHcCeEEEEEEeCCCCChhhccCC---------HHHH-HHHHh---cCC----CCCCCCCHHHHHH
Confidence 99999887655 6899999999999876432110 0111 11110 011 1134788999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 485 MMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 485 aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
+++.++... . ..|+++++.+|
T Consensus 231 ~v~~l~s~~-~-----------------itG~~i~vdGG 251 (257)
T 3tpc_A 231 LVKHICENT-M-----------------LNGEVIRLDGA 251 (257)
T ss_dssp HHHHHHHCT-T-----------------CCSCEEEESTT
T ss_pred HHHHHcccC-C-----------------cCCcEEEECCC
Confidence 999988542 1 36899999888
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=1.7e-11 Score=122.51 Aligned_cols=167 Identities=13% Similarity=0.088 Sum_probs=114.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------------hhhHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------------DELIQDAFTLNIQATRELL 336 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------------~~~~~~~~~~NV~GT~~LL 336 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+.+|+.|+.+++
T Consensus 58 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~ 131 (265)
T 2o23_A 58 NNCVFAPADVTSEK------DVQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVI 131 (265)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHCCCCCEEEECCccCCCCccccccccCCCCHHHHHHHHHHHhHHHHHHH
Confidence 57899999999643 4666655 79999999997532 1235568899999999999
Q ss_pred HHHHhc---C------CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHH
Q psy5825 337 DLATRC---S------QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSF 407 (596)
Q Consensus 337 ~~a~~~---~------~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~ 407 (596)
+++... . +..+||++||.+++.... ....|+.
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~ 172 (265)
T 2o23_A 132 RLVAGEMGQNEPDQGGQRGVIINTASVAAFEGQV---------------------------------------GQAAYSA 172 (265)
T ss_dssp HHHHHHHTTSCCCTTSCCEEEEEECCTHHHHCCT---------------------------------------TCHHHHH
T ss_pred HHHHHHHHhcccccCCCCcEEEEeCChhhcCCCC---------------------------------------CCchhHH
Confidence 998752 1 467899999988754210 1246999
Q ss_pred HHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHH
Q psy5825 408 TKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVA 482 (596)
Q Consensus 408 SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdv 482 (596)
||++.+.+++.++ .|+++++++||.|.++..... ...+...+.. .+ +. ...++.++|+
T Consensus 173 sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~~~~---------~~~~~~~~~~-~~---~~----~~~~~~~~dv 235 (265)
T 2o23_A 173 SKGGIVGMTLPIARDLAPIGIRVMTIAPGLFGTPLLTSL---------PEKVCNFLAS-QV---PF----PSRLGDPAEY 235 (265)
T ss_dssp HHHHHHHHHHHHHHHHGGGTEEEEEEEECCBCCC-------------------CHHHH-TC---SS----SCSCBCHHHH
T ss_pred HHHHHHHHHHHHHHHHhhcCcEEEEEEeccccCcccccc---------CHHHHHHHHH-cC---CC----cCCCCCHHHH
Confidence 9999998887765 589999999999977532110 0000000111 11 11 1247899999
Q ss_pred HHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 483 TNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 483 a~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
|++++.++.... ..|++|++.++
T Consensus 236 a~~~~~l~~~~~------------------~~G~~i~vdgG 258 (265)
T 2o23_A 236 AHLVQAIIENPF------------------LNGEVIRLDGA 258 (265)
T ss_dssp HHHHHHHHHCTT------------------CCSCEEEESTT
T ss_pred HHHHHHHhhcCc------------------cCceEEEECCC
Confidence 999999885321 36889999887
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.32 E-value=5.5e-11 Score=117.69 Aligned_cols=168 Identities=11% Similarity=0.053 Sum_probs=117.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+.+|+.|+.+|++++...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 127 (247)
T 3lyl_A 54 FKARGLVLNISDIE------SIQNFFAEIKAENLAIDILVNNAGITRDNLMMRMSEDEWQSVINTNLSSIFRMSKECVRG 127 (247)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHTTCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57999999999654 3555554 47999999998632 1234568899999999999987641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+.+.... ....|+.||++.+.+++.+
T Consensus 128 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 168 (247)
T 3lyl_A 128 MMKKRWGRIISIGSVVGSAGNP---------------------------------------GQTNYCAAKAGVIGFSKSL 168 (247)
T ss_dssp HHHHTCEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCeEEEEEcchhhccCCC---------------------------------------CcHHHHHHHHHHHHHHHHH
Confidence 2456999999987653210 2246999999888888765
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++.... + .......+.. ......+++++|+|++++.++....
T Consensus 169 a~e~~~~gi~v~~v~PG~v~t~~~~~-------~--~~~~~~~~~~---------~~~~~~~~~~~dva~~i~~l~s~~~ 230 (247)
T 3lyl_A 169 AYEVASRNITVNVVAPGFIATDMTDK-------L--TDEQKSFIAT---------KIPSGQIGEPKDIAAAVAFLASEEA 230 (247)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTTTT-------S--CHHHHHHHHT---------TSTTCCCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHcCeEEEEEeeCcEecccchh-------c--cHHHHHHHhh---------cCCCCCCcCHHHHHHHHHHHhCCCc
Confidence 5 68999999999997754321 1 1111111111 1123468899999999999886543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 231 ~~----------------~tG~~i~vdgG 243 (247)
T 3lyl_A 231 KY----------------ITGQTLHVNGG 243 (247)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------ccCCEEEECCC
Confidence 21 36899999887
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=99.32 E-value=2.9e-11 Score=121.01 Aligned_cols=163 Identities=12% Similarity=0.134 Sum_probs=115.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ ++|+|||+||.... ...+..++++|+.|+.++++++...
T Consensus 53 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 126 (260)
T 1nff_A 53 DAARYVHLDVTQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKP 126 (260)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cCceEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 35889999999653 4666655 79999999997542 1245668999999998777766431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+++.... ....|+.||+..+.+++.+
T Consensus 127 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 167 (260)
T 1nff_A 127 MKEAGRGSIINISSIEGLAGTV---------------------------------------ACHGYTATKFAVRGLTKST 167 (260)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEeehhhcCCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 3568999999998764210 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++|||.|+++... + . .. .+...+ ...+++++|+|++++.++....
T Consensus 168 a~e~~~~gi~v~~v~Pg~v~t~~~~----~----~-~~---------~~~~~~-----~~~~~~~~dvA~~v~~l~s~~~ 224 (260)
T 1nff_A 168 ALELGPSGIRVNSIHPGLVKTPMTD----W----V-PE---------DIFQTA-----LGRAAEPVEVSNLVVYLASDES 224 (260)
T ss_dssp HHHHGGGTEEEEEEEECCBCSGGGT----T----S-CT---------TCSCCS-----SSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhCccCcEEEEEEeCCCCCCccc----c----c-hh---------hHHhCc-----cCCCCCHHHHHHHHHHHhCccc
Confidence 5 5899999999999886421 1 0 00 000011 1247889999999999885432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.++
T Consensus 225 ~~----------------~~G~~~~v~gG 237 (260)
T 1nff_A 225 SY----------------STGAEFVVDGG 237 (260)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------CcCCEEEECCC
Confidence 21 35889999988
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=99.31 E-value=3e-11 Score=119.66 Aligned_cols=169 Identities=9% Similarity=0.066 Sum_probs=114.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+..++.+|+.|+.++++++...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 127 (251)
T 1zk4_A 54 DQIQFFQHDSSDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR 127 (251)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 47899999999643 4555554 48999999997532 1234568899999988887776431
Q ss_pred ---CCC-ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQL-KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~v-krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+. .+||++||.+++.... ....|+.||++.+.++..
T Consensus 128 ~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 168 (251)
T 1zk4_A 128 MKNKGLGASIINMSSIEGFVGDP---------------------------------------SLGAYNASKGAVRIMSKS 168 (251)
T ss_dssp HTTSSSCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEeCCchhccCCC---------------------------------------CCccchHHHHHHHHHHHH
Confidence 344 7999999988764311 124699999999999876
Q ss_pred Hh-------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 419 YL-------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 419 ~~-------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
++ .|++++++|||.|+++.... +. ........ . .......+++++|+|++++.++.
T Consensus 169 ~a~e~~~~~~~i~v~~v~Pg~v~t~~~~~-------~~--~~~~~~~~---~-----~~~~~~~~~~~~dva~~~~~l~~ 231 (251)
T 1zk4_A 169 AALDCALKDYDVRVNTVHPGYIKTPLVDD-------LP--GAEEAMSQ---R-----TKTPMGHIGEPNDIAYICVYLAS 231 (251)
T ss_dssp HHHHHHHTTCSEEEEEEEECCBCCHHHHT-------ST--THHHHHTS---T-----TTCTTSSCBCHHHHHHHHHHHHS
T ss_pred HHHHhcccCCCeEEEEEeeCcCcchhhhh-------cC--chhhhHHH---h-----hcCCCCCCcCHHHHHHHHHHHcC
Confidence 54 47999999999998863211 11 11111100 0 01112358899999999999886
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.+|
T Consensus 232 ~~~~~----------------~~G~~~~v~gG 247 (251)
T 1zk4_A 232 NESKF----------------ATGSEFVVDGG 247 (251)
T ss_dssp GGGTT----------------CCSCEEEESTT
T ss_pred ccccc----------------ccCcEEEECCC
Confidence 53221 35889999887
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.31 E-value=1.5e-11 Score=122.33 Aligned_cols=166 Identities=14% Similarity=0.135 Sum_probs=93.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCC----------hhhhHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLR----------FDELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~----------~~~~~~~~~~~NV~GT~~LL~~a 339 (596)
.++.++.+|++++. ++..+++ .+|+|||+||... ....+..++++|+.|+.++++++
T Consensus 58 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 131 (253)
T 3qiv_A 58 GTAISVAVDVSDPE------SAKAMADRTLAEFGGIDYLVNNAAIFGGMKLDFLLTIDPEYYKKFMSVNLDGALWCTRAV 131 (253)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGGCTTTSCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 57899999999754 3555554 7899999999742 11234568899999977777766
Q ss_pred Hhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 340 TRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 340 ~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
... .+..+||++||..++.. ...|+.||++.+.++
T Consensus 132 ~~~~~~~~~g~iv~isS~~~~~~------------------------------------------~~~Y~asK~a~~~~~ 169 (253)
T 3qiv_A 132 YKKMTKRGGGAIVNQSSTAAWLY------------------------------------------SNYYGLAKVGINGLT 169 (253)
T ss_dssp HHHHHHHTCEEEEEECC-----------------------------------------------------CCHHHHHHHH
T ss_pred HHHHHhcCCCEEEEECCccccCC------------------------------------------CchhHHHHHHHHHHH
Confidence 431 34678999999886531 135999999999998
Q ss_pred HHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+.++ .|+.+++++||.|+++..... .+..++..+..+ + ....+..++|+|++++.++.
T Consensus 170 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--------~~~~~~~~~~~~----~-----~~~~~~~~~dva~~~~~l~s 232 (253)
T 3qiv_A 170 QQLSRELGGRNIRINAIAPGPIDTEANRTT--------TPKEMVDDIVKG----L-----PLSRMGTPDDLVGMCLFLLS 232 (253)
T ss_dssp HHHHHHTTTTTEEEEEEEC------------------------------------------------CCHHHHHHHHHHS
T ss_pred HHHHHHHhhcCeEEEEEEecCCcccchhhc--------CcHHHHHHHhcc----C-----CCCCCCCHHHHHHHHHHHcC
Confidence 8776 589999999999988643211 011111111111 1 11235567899999998886
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.+|
T Consensus 233 ~~~~~----------------~tG~~~~vdgG 248 (253)
T 3qiv_A 233 DEASW----------------ITGQIFNVDGG 248 (253)
T ss_dssp GGGTT----------------CCSCEEEC---
T ss_pred ccccC----------------CCCCEEEECCC
Confidence 43321 36899999988
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.31 E-value=3.3e-11 Score=120.74 Aligned_cols=169 Identities=15% Similarity=0.072 Sum_probs=118.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 60 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 133 (262)
T 3pk0_A 60 GKVIGVQTDVSDRA------QCDALAGRAVEEFGGIDVVCANAGVFPDAPLATMTPEQLNGIFAVNVNGTFYAVQACLDA 133 (262)
T ss_dssp SCEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 47999999999654 3555554 78999999997532 1234568899999999999998752
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||+...... ++ ....|+.||+..+.+++.+
T Consensus 134 m~~~~~g~iv~isS~~~~~~~-------~~-------------------------------~~~~Y~asK~a~~~l~~~l 175 (262)
T 3pk0_A 134 LIASGSGRVVLTSSITGPITG-------YP-------------------------------GWSHYGATKAAQLGFMRTA 175 (262)
T ss_dssp HHHHSSCEEEEECCSBTTTBC-------CT-------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEechhhccCC-------CC-------------------------------CChhhHHHHHHHHHHHHHH
Confidence 256799999998753110 00 1246999999999999876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|+++... . ....++..+... ++ ...+..++|+|++++.++....
T Consensus 176 a~e~~~~gi~vn~v~PG~v~t~~~~------~---~~~~~~~~~~~~----~p-----~~r~~~p~dva~~v~~L~s~~~ 237 (262)
T 3pk0_A 176 AIELAPHKITVNAIMPGNIMTEGLL------E---NGEEYIASMARS----IP-----AGALGTPEDIGHLAAFLATKEA 237 (262)
T ss_dssp HHHHGGGTCEEEEEEECSBCCHHHH------T---TCHHHHHHHHTT----ST-----TSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHhhCcEEEEEEeCcCcCcccc------c---cCHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 6 6899999999999875321 0 112222222221 11 1236789999999999886543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 238 ~~----------------itG~~i~vdGG 250 (262)
T 3pk0_A 238 GY----------------ITGQAIAVDGG 250 (262)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------CcCCEEEECCC
Confidence 21 36899999988
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=99.31 E-value=8e-11 Score=118.43 Aligned_cols=166 Identities=14% Similarity=0.101 Sum_probs=116.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+..++++|+.|+.+|++++...
T Consensus 78 ~~~~~~~~D~~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 151 (269)
T 4dmm_A 78 GEAFAVKADVSQES------EVEALFAAVIERWGRLDVLVNNAGITRDTLLLRMKRDDWQSVLDLNLGGVFLCSRAAAKI 151 (269)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999654 3555554 68999999998642 1345668899999999999988531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||++.+.... ....|+.||++.+.+++.+
T Consensus 152 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~l~~~l 192 (269)
T 4dmm_A 152 MLKQRSGRIINIASVVGEMGNP---------------------------------------GQANYSAAKAGVIGLTKTV 192 (269)
T ss_dssp HHHHTCCEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECchhhcCCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 2456999999987643210 1246999999888887766
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++... .+....... .++ ...+..++|+|++++.++..+.
T Consensus 193 a~e~~~~gi~vn~v~PG~v~T~~~~-------------~~~~~~~~~---~~p-----~~r~~~~~dvA~~v~~l~s~~~ 251 (269)
T 4dmm_A 193 AKELASRGITVNAVAPGFIATDMTS-------------ELAAEKLLE---VIP-----LGRYGEAAEVAGVVRFLAADPA 251 (269)
T ss_dssp HHHHGGGTCEEEEEEECCBTTSCSC-------------HHHHHHHGG---GCT-----TSSCBCHHHHHHHHHHHHHCGG
T ss_pred HHHHhhhCcEEEEEEECCCcCcccc-------------cccHHHHHh---cCC-----CCCCCCHHHHHHHHHHHhCCcc
Confidence 5 6899999999999775321 111111111 111 2357789999999999987532
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.+|
T Consensus 252 ~~~---------------itG~~i~vdGG 265 (269)
T 4dmm_A 252 AAY---------------ITGQVINIDGG 265 (269)
T ss_dssp GGG---------------CCSCEEEESTT
T ss_pred cCC---------------CcCCEEEECCC
Confidence 211 36899999887
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.31 E-value=4e-11 Score=120.15 Aligned_cols=169 Identities=11% Similarity=0.063 Sum_probs=115.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+||+++. ++..+++ .+|+|||+||..... ..+...+++|+.|+.++++++...
T Consensus 73 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 146 (266)
T 3o38_A 73 GRVEAVVCDVTSTE------AVDALITQTVEKAGRLDVLVNNAGLGGQTPVVDMTDEEWDRVLNVTLTSVMRATRAALRY 146 (266)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEeCCCCHH------HHHHHHHHHHHHhCCCcEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57999999999653 4555554 579999999975421 234568899999999999998752
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+..+||++||.+.+.... ....|+.||++.+.+++.
T Consensus 147 ~~~~~~~~~iv~~sS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~ 187 (266)
T 3o38_A 147 FRGVDHGGVIVNNASVLGWRAQH---------------------------------------SQSHYAAAKAGVMALTRC 187 (266)
T ss_dssp HHTSSCCEEEEEECCGGGTCCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEEeCCHHHcCCCC---------------------------------------CCchHHHHHHHHHHHHHH
Confidence 2456899999987654210 224699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.+++++||.|..+..... . ...++.. .........+++++|+|++++.++...
T Consensus 188 la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~-~~~~~~~---------~~~~~~~~r~~~~~dva~~i~~l~s~~ 250 (266)
T 3o38_A 188 SAIEAVEFGVRINAVSPSIARHKFLEKT-------S-SSELLDR---------LASDEAFGRAAEPWEVAATIAFLASDY 250 (266)
T ss_dssp HHHHHGGGTEEEEEEEECCCCC----------------------------------CCTTSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHHHcCcEEEEEeCCcccchhhhcc-------C-cHHHHHH---------HHhcCCcCCCCCHHHHHHHHHHHcCcc
Confidence 65 689999999999977532110 0 0000000 111222345789999999999988653
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|+++++.+|
T Consensus 251 ~~~----------------~tG~~i~vdgG 264 (266)
T 3o38_A 251 SSY----------------MTGEVVSVSSQ 264 (266)
T ss_dssp GTT----------------CCSCEEEESSC
T ss_pred ccC----------------ccCCEEEEcCC
Confidence 321 36899999887
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.31 E-value=5.1e-11 Score=120.76 Aligned_cols=168 Identities=10% Similarity=0.100 Sum_probs=114.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++ ..+|+|||+||.... ...+..++.+|+.|+.+|++++...
T Consensus 93 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 166 (285)
T 2c07_A 93 YESSGYAGDVSKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR 166 (285)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CceeEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999653 455555 368999999997642 1245668899999988888887631
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+++.... ....|+.||++.+.++..+
T Consensus 167 ~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 207 (285)
T 2c07_A 167 MINNRYGRIINISSIVGLTGNV---------------------------------------GQANYSSSKAGVIGFTKSL 207 (285)
T ss_dssp HHHHTCEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCCEEEEECChhhccCCC---------------------------------------CCchHHHHHHHHHHHHHHH
Confidence 3568999999987643210 1246999999999988776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++|||.|.++.... . ...+...+.. . .+ ...+++++|+|++++.++....
T Consensus 208 a~e~~~~gi~v~~v~Pg~v~t~~~~~-------~--~~~~~~~~~~-~---~~-----~~~~~~~~dvA~~~~~l~~~~~ 269 (285)
T 2c07_A 208 AKELASRNITVNAIAPGFISSDMTDK-------I--SEQIKKNIIS-N---IP-----AGRMGTPEEVANLACFLSSDKS 269 (285)
T ss_dssp HHHHGGGTEEEEEEEECSBCC------------C--CHHHHHHHHT-T---CT-----TSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHhCcEEEEEEeCcEecCchhh-------c--CHHHHHHHHh-h---CC-----CCCCCCHHHHHHHHHHHhCCCc
Confidence 5 58999999999998763211 0 1122111111 1 11 1248899999999998886533
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 270 ~~----------------~~G~~i~v~gG 282 (285)
T 2c07_A 270 GY----------------INGRVFVIDGG 282 (285)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------CCCCEEEeCCC
Confidence 21 35889999887
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.5e-10 Score=115.76 Aligned_cols=142 Identities=15% Similarity=0.175 Sum_probs=104.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---------cccEEEEcCccCC----h----hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---------HIHVIIHAAASLR----F----DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---------~vd~ViH~AA~v~----~----~~~~~~~~~~NV~GT~~LL~~a 339 (596)
.++.++.+||+++.. +..+++ .+|+|||+||... + ...+..++.+|+.|+.+|++++
T Consensus 72 ~~~~~~~~Dl~~~~~------v~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 145 (267)
T 1sny_A 72 SNIHILEIDLRNFDA------YDKLVADIEGVTKDQGLNVLFNNAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKAC 145 (267)
T ss_dssp TTEEEEECCTTCGGG------HHHHHHHHHHHHGGGCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CceEEEEecCCChHH------HHHHHHHHHHhcCCCCccEEEECCCcCCCccccccCCHHHHHHHHhhhchHHHHHHHHH
Confidence 579999999997653 555554 6999999999765 1 2345568899999999999998
Q ss_pred Hhc---C------C-----CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchH
Q psy5825 340 TRC---S------Q-----LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSY 405 (596)
Q Consensus 340 ~~~---~------~-----vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y 405 (596)
... . + ..+||++||..++..... .. ....|
T Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~-----------------------------------~~-~~~~Y 189 (267)
T 1sny_A 146 LPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGNT-----------------------------------DG-GMYAY 189 (267)
T ss_dssp HHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTCC-----------------------------------SC-CCHHH
T ss_pred HHHHhhcccccccccccCCCceEEEEecccccccCCC-----------------------------------CC-CchHH
Confidence 652 0 1 468999999887653110 00 12469
Q ss_pred HHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHH
Q psy5825 406 SFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVD 480 (596)
Q Consensus 406 ~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVD 480 (596)
+.||++.+.++..++ .|+.++++|||.|..+.. .. ..++..+
T Consensus 190 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~-----------~~----------------------~~~~~~~ 236 (267)
T 1sny_A 190 RTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVKTDMG-----------GS----------------------SAPLDVP 236 (267)
T ss_dssp HHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBCSTTT-----------CT----------------------TCSBCHH
T ss_pred HHHHHHHHHHHHHHHHHhhcCCcEEEEeCCcceecCCC-----------CC----------------------CCCCCHH
Confidence 999999999998765 589999999999855321 00 1246789
Q ss_pred HHHHHHHHHHHhh
Q psy5825 481 VATNMMLGVVWKT 493 (596)
Q Consensus 481 dva~aii~~~~~~ 493 (596)
++|+.++.++...
T Consensus 237 ~~a~~~~~~~~~~ 249 (267)
T 1sny_A 237 TSTGQIVQTISKL 249 (267)
T ss_dssp HHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHhc
Confidence 9999999988754
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=99.29 E-value=2.6e-11 Score=121.06 Aligned_cols=176 Identities=14% Similarity=0.063 Sum_probs=111.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|+++.. ++..+++ .+|+|||+||.... ...+...+++|+.|+.+|++++..
T Consensus 55 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 128 (261)
T 3n74_A 55 DAALAVAADISKEA------DVDAAVEAALSKFGKVDILVNNAGIGHKPQNAELVEPEEFDRIVGVNVRGVYLMTSKLIP 128 (261)
T ss_dssp TTEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 67999999999653 3555554 67999999997541 123456889999999999998864
Q ss_pred c-------CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHH
Q psy5825 342 C-------SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGES 414 (596)
Q Consensus 342 ~-------~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~ 414 (596)
. ....+||++||...+.... ....|+.||++.+.
T Consensus 129 ~~~~~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~ 169 (261)
T 3n74_A 129 HFKENGAKGQECVILNVASTGAGRPRP---------------------------------------NLAWYNATKGWVVS 169 (261)
T ss_dssp HHHHHHHTTCCEEEEEECCTTTTSCCT---------------------------------------TCHHHHHHHHHHHH
T ss_pred HHHhcCCCCCCeEEEEeCchhhcCCCC---------------------------------------CccHHHHHHHHHHH
Confidence 2 0134699999987654210 22459999999999
Q ss_pred HHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHH
Q psy5825 415 VVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGV 489 (596)
Q Consensus 415 lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~ 489 (596)
+++.++ .|+.+++++||.|.++......+ . ....+. . ..........++.++|+|++++.+
T Consensus 170 ~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~~~---~--~~~~~~-~--------~~~~~~~~~~~~~~~dva~~~~~l 235 (261)
T 3n74_A 170 VTKALAIELAPAKIRVVALNPVAGETPLLTTFMG---E--DSEEIR-K--------KFRDSIPMGRLLKPDDLAEAAAFL 235 (261)
T ss_dssp HHHHHHHHHGGGTEEEEEEEEC---------------------------------------CTTSSCCCHHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCcEEEEEecCcccChhhhhhcc---c--CcHHHH-H--------HHhhcCCcCCCcCHHHHHHHHHHH
Confidence 988765 68999999999997764321100 0 000000 0 011112234688999999999988
Q ss_pred HHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 490 VWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
+...... ..|++|++.+| ..++
T Consensus 236 ~s~~~~~----------------itG~~i~vdgG--~~~~ 257 (261)
T 3n74_A 236 CSPQASM----------------ITGVALDVDGG--RSIG 257 (261)
T ss_dssp TSGGGTT----------------CCSCEEEESTT--TTC-
T ss_pred cCCcccC----------------cCCcEEEecCC--cccC
Confidence 8543321 36899999988 5443
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.29 E-value=7.1e-11 Score=118.95 Aligned_cols=174 Identities=10% Similarity=0.048 Sum_probs=114.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..++ ..+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 70 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 143 (273)
T 1ae1_A 70 LNVEGSVCDLLSRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 143 (273)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 47899999999653 355554 578999999997532 124566889999999999998852
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||.+++.... ....|+.||+..+.+++.
T Consensus 144 ~m~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~ 184 (273)
T 1ae1_A 144 LLKASQNGNVIFLSSIAGFSALP---------------------------------------SVSLYSASKGAINQMTKS 184 (273)
T ss_dssp HHHHHTSEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEcCHhhcCCCC---------------------------------------CcchhHHHHHHHHHHHHH
Confidence 12467999999998765311 124699999999999887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.|+++..... .........+...+... .+ ...+..++|+|++++.++...
T Consensus 185 la~e~~~~gi~v~~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~~----~p-----~~r~~~p~dvA~~v~~l~s~~ 252 (273)
T 1ae1_A 185 LACEWAKDNIRVNSVAPGVILTPLVETA---IKKNPHQKEEIDNFIVK----TP-----MGRAGKPQEVSALIAFLCFPA 252 (273)
T ss_dssp HHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHHH----ST-----TCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHhhcCcEEEEEEeCCCcCchhhhh---hhcccCcHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhCcc
Confidence 65 589999999999988743211 00000001111111111 11 124788999999999887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.+|
T Consensus 253 ~~~----------------~tG~~i~vdGG 266 (273)
T 1ae1_A 253 ASY----------------ITGQIIWADGG 266 (273)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred ccC----------------cCCCEEEECCC
Confidence 221 35889999887
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.29 E-value=1.2e-11 Score=123.92 Aligned_cols=178 Identities=11% Similarity=0.011 Sum_probs=118.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh------------hhhHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF------------DELIQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~------------~~~~~~~~~~NV~GT~~LL~ 337 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+..++.+|+.|+.+|++
T Consensus 64 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 137 (271)
T 3ek2_A 64 GSELVFPCDVADDA------QIDALFASLKTHWDSLDGLVHSIGFAPREAIAGDFLDGLTRENFRIAHDISAYSFPALAK 137 (271)
T ss_dssp TCCCEEECCTTCHH------HHHHHHHHHHHHCSCEEEEEECCCCCCGGGGSSCTTTTCCHHHHHHHHHHHTTHHHHHHH
T ss_pred CCcEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccccCccccccCHHHHHHHHhhhHHHHHHHHH
Confidence 45789999999653 4565554 57999999997542 12345688999999999999
Q ss_pred HHHhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 338 LATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 338 ~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
++... ....+||++||.+.+.... ....|+.||++.+.++
T Consensus 138 ~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~ 178 (271)
T 3ek2_A 138 AALPMLSDDASLLTLSYLGAERAIP---------------------------------------NYNTMGLAKAALEASV 178 (271)
T ss_dssp HHGGGEEEEEEEEEEECGGGTSBCT---------------------------------------TTTHHHHHHHHHHHHH
T ss_pred HHHHHhccCceEEEEeccccccCCC---------------------------------------CccchhHHHHHHHHHH
Confidence 99762 1234899999987654210 2256999999999998
Q ss_pred HHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
..++ .|+.+++++||.|..+..... .....++..+..+ . ....+..++|+|++++.++.
T Consensus 179 ~~la~e~~~~gi~v~~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~----~-----~~~~~~~pedva~~i~~l~s 242 (271)
T 3ek2_A 179 RYLAVSLGAKGVRVNAISAGPIKTLAASGI-------KSFGKILDFVESN----S-----PLKRNVTIEQVGNAGAFLLS 242 (271)
T ss_dssp HHHHHHHHTTTCEEEEEEECCC-----CCC-------HHHHHHHHHHHHH----S-----TTSSCCCHHHHHHHHHHHHS
T ss_pred HHHHHHHHhcCcEEEEEecCcccchhhhcc-------cchHHHHHHHHhc----C-----CcCCCCCHHHHHHHHHHHcC
Confidence 8766 589999999999977543211 1011122111111 1 11246789999999999886
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHH
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEY 533 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el 533 (596)
..... ..|++|++.+| ..+++.++
T Consensus 243 ~~~~~----------------~tG~~i~vdgG--~~~~~~~~ 266 (271)
T 3ek2_A 243 DLASG----------------VTAEVMHVDSG--FNAVVGGM 266 (271)
T ss_dssp GGGTT----------------CCSEEEEESTT--GGGBCCCC
T ss_pred cccCC----------------eeeeEEEECCC--eeeehhhh
Confidence 53321 36899999998 55555444
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=99.28 E-value=5.4e-11 Score=119.65 Aligned_cols=168 Identities=13% Similarity=0.085 Sum_probs=115.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||..... ..+..++++|+.|+.++++++...
T Consensus 79 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 152 (271)
T 4iin_A 79 YKAAVIKFDAASES------DFIEAIQTIVQSDGGLSYLVNNAGVVRDKLAIKMKTEDFHHVIDNNLTSAFIGCREALKV 152 (271)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 57999999999653 3555544 689999999986421 245668899999999999888541
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.||++.+.+++.+
T Consensus 153 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 193 (271)
T 4iin_A 153 MSKSRFGSVVNVASIIGERGNM---------------------------------------GQTNYSASKGGMIAMSKSF 193 (271)
T ss_dssp HHHHTCEEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCEEEEEechhhcCCCC---------------------------------------CchHhHHHHHHHHHHHHHH
Confidence 2457999999987643210 1246999999999998776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+++++||.|..+...... ..+... .........+..++|+|++++.++....
T Consensus 194 a~e~~~~gi~v~~v~PG~v~T~~~~~~~---------~~~~~~---------~~~~~~~~~~~~p~dvA~~i~~l~s~~~ 255 (271)
T 4iin_A 194 AYEGALRNIRFNSVTPGFIETDMNANLK---------DELKAD---------YVKNIPLNRLGSAKEVAEAVAFLLSDHS 255 (271)
T ss_dssp HHHHHTTTEEEEEEEECSBCCC------------------------------CGGGCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHhCcEEEEEEeCcccCCchhhhc---------HHHHHH---------HHhcCCcCCCcCHHHHHHHHHHHhCCCc
Confidence 5 6899999999999765321110 000000 0111122357899999999999886543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 256 ~~----------------itG~~i~vdGG 268 (271)
T 4iin_A 256 SY----------------ITGETLKVNGG 268 (271)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------CcCCEEEeCCC
Confidence 21 36899999887
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.28 E-value=5e-11 Score=120.67 Aligned_cols=191 Identities=13% Similarity=0.120 Sum_probs=121.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-----hhHHHHHHHHHHHHHHHHHHHHhc-C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-----ELIQDAFTLNIQATRELLDLATRC-S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-----~~~~~~~~~NV~GT~~LL~~a~~~-~ 343 (596)
.++.++.+||+++. ++..+++ .+|+|||+||..... ..+...+++|+.|+.+|++++... .
T Consensus 71 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~ 144 (287)
T 3pxx_A 71 RKAYTAEVDVRDRA------AVSRELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLT 144 (287)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCC
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhh
Confidence 67999999999653 3555554 789999999986432 345678999999999999999863 2
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
...+||++||.+.+...... + .. + ....+ ....|+.||++.+.+++.++
T Consensus 145 ~~g~iv~isS~~~~~~~~~~-----~--~~------------~---~~~~~------~~~~Y~asK~a~~~~~~~la~e~ 196 (287)
T 3pxx_A 145 SGASIITTGSVAGLIAAAQP-----P--GA------------G---GPQGP------GGAGYSYAKQLVDSYTLQLAAQL 196 (287)
T ss_dssp TTCEEEEECCHHHHHHHHCC-----C----------------------CHH------HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEeccchhccccccc-----c--cc------------c---ccCCC------ccchHHHHHHHHHHHHHHHHHHH
Confidence 34589999998775421100 0 00 0 00000 11469999999999998766
Q ss_pred --cCCCEEEecCCccccCCCCCccc---cCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVG---WSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G---~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+.+++++||.|.++.....+. +......+.. ...... ++........++.++|+|++++.++.....
T Consensus 197 ~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~--~~~~~~----~~~~~~~~~~~~~p~dva~~v~fL~s~~a~ 270 (287)
T 3pxx_A 197 APQSIRANVIHPTNVNTDMLNSAPMYRQFRPDLEAPSR--ADALLA----FPAMQAMPTPYVEASDISNAVCFLASDESR 270 (287)
T ss_dssp GGGTCEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCH--HHHHHH----GGGGCSSSCSCBCHHHHHHHHHHHHSGGGT
T ss_pred hhcCcEEEEEecCccccccccccchhhhhccccccchh--HHHHhh----hhhhcccCCCCCCHHHHHhhHheecchhhc
Confidence 58999999999998865422100 0000000000 000000 001111115689999999999998854332
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|+++++.+|
T Consensus 271 ~----------------itG~~i~vdGG 282 (287)
T 3pxx_A 271 Y----------------VTGLQFKVDAG 282 (287)
T ss_dssp T----------------CCSCEEEESTT
T ss_pred C----------------CCCceEeECch
Confidence 1 36899999988
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=99.28 E-value=4.2e-11 Score=120.54 Aligned_cols=168 Identities=10% Similarity=0.040 Sum_probs=115.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+..++++|+.|+.+|++++...
T Consensus 77 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 150 (270)
T 3ftp_A 77 LEGRGAVLNVNDAT------AVDALVESTLKEFGALNVLVNNAGITQDQLAMRMKDDEWDAVIDTNLKAVFRLSRAVLRP 150 (270)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 47889999999653 3555554 68999999997542 1345668999999999999998631
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||++.+.... ....|+.||++.+.+++.+
T Consensus 151 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 191 (270)
T 3ftp_A 151 MMKARGGRIVNITSVVGSAGNP---------------------------------------GQVNYAAAKAGVAGMTRAL 191 (270)
T ss_dssp HHHHTCEEEEEECCHHHHHCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECchhhCCCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 2456899999987653210 1246999999988888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|..+.... + +......+.. ......+..++|+|++++.++....
T Consensus 192 a~e~~~~gI~vn~v~PG~v~T~~~~~-------~--~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~ 253 (270)
T 3ftp_A 192 AREIGSRGITVNCVAPGFIDTDMTKG-------L--PQEQQTALKT---------QIPLGRLGSPEDIAHAVAFLASPQA 253 (270)
T ss_dssp HHHHGGGTEEEEEEEECSBCSHHHHH-------S--CHHHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhhhCeEEEEEEeCCCcCcchhh-------c--CHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHhCCCc
Confidence 5 68999999999997642210 0 1111111111 1122357899999999998885433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 254 ~~----------------itG~~i~vdGG 266 (270)
T 3ftp_A 254 GY----------------ITGTTLHVNGG 266 (270)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------ccCcEEEECCC
Confidence 21 36899999887
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=99.28 E-value=1.5e-10 Score=116.09 Aligned_cols=167 Identities=11% Similarity=0.023 Sum_probs=116.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.+++++|..
T Consensus 76 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 149 (267)
T 4iiu_A 76 GNGRLLSFDVANRE------QCREVLEHEIAQHGAWYGVVSNAGIARDAAFPALSNDDWDAVIHTNLDSFYNVIQPCIMP 149 (267)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCccEEEECCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57999999999653 3555544 68999999997642 124556889999999999998741
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||.+.+.... ....|+.||++.+.++..
T Consensus 150 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~ 190 (267)
T 4iiu_A 150 MIGARQGGRIITLSSVSGVMGNR---------------------------------------GQVNYSAAKAGIIGATKA 190 (267)
T ss_dssp HHHHTSCEEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEEEcchHhccCCC---------------------------------------CCchhHHHHHHHHHHHHH
Confidence 14567999999987643210 124699999988877766
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.|.++.... ....+..+... + ....+..++|+|++++.++...
T Consensus 191 la~e~~~~gi~v~~v~PG~v~t~~~~~----------~~~~~~~~~~~----~-----p~~~~~~~edva~~~~~L~s~~ 251 (267)
T 4iiu_A 191 LAIELAKRKITVNCIAPGLIDTGMIEM----------EESALKEAMSM----I-----PMKRMGQAEEVAGLASYLMSDI 251 (267)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSTTCCC----------CHHHHHHHHHT----C-----TTCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHhhcCeEEEEEEEeeecCCcccc----------cHHHHHHHHhc----C-----CCCCCcCHHHHHHHHHHHhCCc
Confidence 55 58999999999997754311 12222222221 1 1234778999999999988653
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|+++++.+|
T Consensus 252 ~~~----------------itG~~i~vdGG 265 (267)
T 4iiu_A 252 AGY----------------VTRQVISINGG 265 (267)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred ccC----------------ccCCEEEeCCC
Confidence 321 36899999876
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=99.28 E-value=7.9e-11 Score=117.51 Aligned_cols=174 Identities=12% Similarity=0.054 Sum_probs=115.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||..... ..+..++.+|+.|+.++++++...
T Consensus 53 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 126 (258)
T 3a28_C 53 QKAVFVGLDVTDKA------NFDSAIDEAAEKLGGFDVLVNNAGIAQIKPLLEVTEEDLKQIYSVNVFSVFFGIQAASRK 126 (258)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHH
Confidence 57899999999653 3555554 789999999975421 245568999999999999998752
Q ss_pred ---CCC-ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQL-KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~v-krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+. .+||++||.+.+.... ....|+.||+..+.+++.
T Consensus 127 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 167 (258)
T 3a28_C 127 FDELGVKGKIINAASIAAIQGFP---------------------------------------ILSAYSTTKFAVRGLTQA 167 (258)
T ss_dssp HHHHTCCCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEEECcchhccCCC---------------------------------------CchhHHHHHHHHHHHHHH
Confidence 244 7999999987654210 124699999999999887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCC---CCc--HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNL---YGP--GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLG 488 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~---~~~--~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~ 488 (596)
++ .|+.+++++||.|..+... .+...+ .+. ..++..+.. ......+..++|+|++++.
T Consensus 168 la~e~~~~gi~vn~v~PG~v~t~~~~---~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~ 235 (258)
T 3a28_C 168 AAQELAPKGHTVNAYAPGIVGTGMWE---QIDAELSKINGKPIGENFKEYSS---------SIALGRPSVPEDVAGLVSF 235 (258)
T ss_dssp HHHHHGGGTCEEEEEEECCBCSHHHH---HHHHHHHHHHCCCTTHHHHHHHT---------TCTTSSCBCHHHHHHHHHH
T ss_pred HHHHHHhhCeEEEEEECCccCChhhh---hhhhhhccccCCchHHHHHHHHh---------cCCCCCccCHHHHHHHHHH
Confidence 65 5899999999999664210 000000 000 011111111 0111247889999999999
Q ss_pred HHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 489 VVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++...... ..|++|++.+|
T Consensus 236 l~s~~~~~----------------~tG~~i~vdGG 254 (258)
T 3a28_C 236 LASENSNY----------------VTGQVMLVDGG 254 (258)
T ss_dssp HHSGGGTT----------------CCSCEEEESSS
T ss_pred HhCcccCC----------------CCCCEEEECCC
Confidence 88543321 36889999887
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=99.28 E-value=7.2e-11 Score=119.03 Aligned_cols=168 Identities=9% Similarity=0.035 Sum_probs=113.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh------h---hhHHHHHHHHHHH----HHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF------D---ELIQDAFTLNIQA----TRELL 336 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~------~---~~~~~~~~~NV~G----T~~LL 336 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... . ..+..++.+|+.| +++++
T Consensus 83 ~~~~~~~~Dl~~~~------~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~ 156 (279)
T 3ctm_A 83 VHSKAYKCNISDPK------SVEETISQQEKDFGTIDVFVANAGVTWTQGPEIDVDNYDSWNKIISVDLNGVYYCSHNIG 156 (279)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECGGGSTTC--CCCSSHHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CcceEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 57899999999643 4555554 38999999997543 2 2234588999999 55666
Q ss_pred HHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 337 DLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 337 ~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
.++.. .+..+||++||.+++.... . . ....|+.||+..|.++
T Consensus 157 ~~~~~-~~~~~iv~isS~~~~~~~~------~------------------------------~-~~~~Y~~sK~a~~~~~ 198 (279)
T 3ctm_A 157 KIFKK-NGKGSLIITSSISGKIVNI------P------------------------------Q-LQAPYNTAKAACTHLA 198 (279)
T ss_dssp HHHHH-HTCCEEEEECCCTTSCC---------------------------------------C-CHHHHHHHHHHHHHHH
T ss_pred HHHHh-cCCCeEEEECchHhccCCC------C------------------------------C-CcccHHHHHHHHHHHH
Confidence 66665 3678999999987643200 0 0 1246999999999999
Q ss_pred HHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+.++ .+ .+++++||.|.++... .....+...+.. . .+ ...+++++|+|++++.++.
T Consensus 199 ~~la~e~~~~~-~v~~v~Pg~v~t~~~~---------~~~~~~~~~~~~-~---~p-----~~~~~~~~dvA~~~~~l~s 259 (279)
T 3ctm_A 199 KSLAIEWAPFA-RVNTISPGYIDTDITD---------FASKDMKAKWWQ-L---TP-----LGREGLTQELVGGYLYLAS 259 (279)
T ss_dssp HHHHHHTTTTC-EEEEEEECSBSSTTTS---------SCCHHHHHHHHH-H---ST-----TCSCBCGGGTHHHHHHHHS
T ss_pred HHHHHHhcccC-CEEEEeccCCcccccc---------ccChHHHHHHHH-h---CC-----ccCCcCHHHHHHHHHHHhC
Confidence 8876 46 8999999999775321 011222222111 1 11 1247889999999999886
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.+|
T Consensus 260 ~~~~~----------------~tG~~i~vdgG 275 (279)
T 3ctm_A 260 NASTF----------------TTGSDVVIDGG 275 (279)
T ss_dssp GGGTT----------------CCSCEEEESTT
T ss_pred ccccC----------------ccCCEEEECCC
Confidence 53221 35889999887
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.27 E-value=8.1e-11 Score=117.46 Aligned_cols=171 Identities=11% Similarity=0.038 Sum_probs=115.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 55 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~ 128 (257)
T 3imf_A 55 GQILTVQMDVRNTD------DIQKMIEQIDEKFGRIDILINNAAGNFICPAEDLSVNGWNSVINIVLNGTFYCSQAIGKY 128 (257)
T ss_dssp TCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999653 3555554 68999999996432 123556899999999999999843
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||...+.... ....|+.||+..+.+.+.
T Consensus 129 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~ 169 (257)
T 3imf_A 129 WIEKGIKGNIINMVATYAWDAGP---------------------------------------GVIHSAAAKAGVLAMTKT 169 (257)
T ss_dssp HHHHTCCCEEEEECCGGGGSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHhhCCCcEEEEECchhhccCCC---------------------------------------CcHHHHHHHHHHHHHHHH
Confidence 13467899999987654210 124699999999988876
Q ss_pred Hh------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .|+++++++||.|.++..... .|... .+...+.. ......+..++|+|++++.++..
T Consensus 170 la~e~~~~~gIrvn~v~PG~v~t~~~~~~-~~~~~-----~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~ 234 (257)
T 3imf_A 170 LAVEWGRKYGIRVNAIAPGPIERTGGADK-LWISE-----EMAKRTIQ---------SVPLGRLGTPEEIAGLAYYLCSD 234 (257)
T ss_dssp HHHHHHHHHCCEEEEEEECCBSSCCCC-------------CCSHHHHT---------TSTTCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHhccccCeEEEEEEECCCcCCcchhh-cccCH-----HHHHHHHh---------cCCCCCCcCHHHHHHHHHHHcCc
Confidence 54 389999999999987632110 00000 00001111 11123478899999999998865
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|+++++.+|
T Consensus 235 ~~~~----------------itG~~i~vdGG 249 (257)
T 3imf_A 235 EAAY----------------INGTCMTMDGG 249 (257)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred hhcC----------------ccCCEEEECCC
Confidence 4321 36899999988
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.27 E-value=2.5e-11 Score=122.38 Aligned_cols=170 Identities=10% Similarity=0.074 Sum_probs=117.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++. ++..+. ..+|+|||+||..... ..+...+++|+.|+.++++++...
T Consensus 79 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 152 (273)
T 3uf0_A 79 GSAEAVVADLADLE------GAANVAEELAATRRVDVLVNNAGIIARAPAEEVSLGRWREVLTVNLDAAWVLSRSFGTAM 152 (273)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHhcCCCcEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 57899999999754 244433 3789999999986421 234568899999999999988431
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..+||++||...+.... ....|+.||++.+.+++.++
T Consensus 153 ~~~~~g~IV~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~la 193 (273)
T 3uf0_A 153 LAHGSGRIVTIASMLSFQGGR---------------------------------------NVAAYAASKHAVVGLTRALA 193 (273)
T ss_dssp HHHTCEEEEEECCGGGTSCCS---------------------------------------SCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCCEEEEEcchHhcCCCC---------------------------------------CChhHHHHHHHHHHHHHHHH
Confidence 3567999999988754211 12469999999999988765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+++++++||.|.++..... .........+..+ .| ...+..++|+|++++.++.....
T Consensus 194 ~e~~~~gI~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~----~p-----~~r~~~pedva~~v~~L~s~~a~ 257 (273)
T 3uf0_A 194 SEWAGRGVGVNALAPGYVVTANTAAL-------RADDERAAEITAR----IP-----AGRWATPEDMVGPAVFLASDAAS 257 (273)
T ss_dssp HHHGGGTEEEEEEEECSBCSGGGHHH-------HTSHHHHHHHHHH----ST-----TSSCBCGGGGHHHHHHHHSGGGT
T ss_pred HHHhhcCcEEEEEEeCCCcCCchhhc-------ccCHHHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHhCchhc
Confidence 689999999999987632110 0011111122211 11 13467889999999998865432
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|+++++.+|
T Consensus 258 ~----------------itG~~i~vdGG 269 (273)
T 3uf0_A 258 Y----------------VHGQVLAVDGG 269 (273)
T ss_dssp T----------------CCSCEEEESTT
T ss_pred C----------------CcCCEEEECcC
Confidence 1 36899999887
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-10 Score=115.49 Aligned_cols=168 Identities=9% Similarity=0.008 Sum_probs=112.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ ++|+|||+||.... ...+...+.+|+.|+.++++.+...
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 124 (254)
T 1hdc_A 51 DAARYQHLDVTIEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA 124 (254)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46889999999653 4555554 79999999997542 1235668899999998666554321
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+++.... ....|+.||+..+.+++.+
T Consensus 125 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 165 (254)
T 1hdc_A 125 MKDAGGGSIVNISSAAGLMGLA---------------------------------------LTSSYGASKWGVRGLSKLA 165 (254)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECchhhccCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 3568999999988754210 1246999999999998776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccc-cHHHHHHHHHHHHHhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLI-PVDVATNMMLGVVWKT 493 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~i-pVDdva~aii~~~~~~ 493 (596)
+ .|+.+++++||.|+++... .........+.. ......++ +++|+|++++.++...
T Consensus 166 a~e~~~~gi~v~~v~Pg~v~t~~~~-----------------~~~~~~~~~~~~-~~p~~~~~~~~~dvA~~v~~l~s~~ 227 (254)
T 1hdc_A 166 AVELGTDRIRVNSVHPGMTYTPMTA-----------------ETGIRQGEGNYP-NTPMGRVGNEPGEIAGAVVKLLSDT 227 (254)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHH-----------------HHTCCCSTTSCT-TSTTSSCB-CHHHHHHHHHHHHSGG
T ss_pred HHHhhhcCeEEEEEecccCcCcccc-----------------ccchhHHHHHHh-cCCCCCCCCCHHHHHHHHHHHhCch
Confidence 5 5899999999999775211 000000000000 00112366 8999999999988643
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.++
T Consensus 228 ~~~----------------~tG~~~~vdgG 241 (254)
T 1hdc_A 228 SSY----------------VTGAELAVDGG 241 (254)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hcC----------------CCCCEEEECCC
Confidence 321 35889999887
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.27 E-value=4.7e-11 Score=123.51 Aligned_cols=117 Identities=16% Similarity=0.245 Sum_probs=87.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. .+..+++ ++|+|||+||...+ ...+..++++|+.|+.+++++|..
T Consensus 59 ~~~~~~~~Dvtd~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~a~lp~ 132 (324)
T 3u9l_A 59 VDLRTLELDVQSQV------SVDRAIDQIIGEDGRIDVLIHNAGHMVFGPAEAFTPEQFAELYDINVLSTQRVNRAALPH 132 (324)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCBCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57999999999653 4666655 79999999997532 123456889999999999999842
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||++.++... . ....|+.||++.|.+++.+
T Consensus 133 m~~~~~g~iV~isS~~~~~~~~-------------------------------------~-~~~~Y~asKaa~~~~~~~l 174 (324)
T 3u9l_A 133 MRRQKHGLLIWISSSSSAGGTP-------------------------------------P-YLAPYFAAKAAMDAIAVQY 174 (324)
T ss_dssp HHHHTCEEEEEECCGGGTSCCC-------------------------------------S-SCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEecchhccCCC-------------------------------------C-cchhHHHHHHHHHHHHHHH
Confidence 13568999999988764210 0 2246999999999999877
Q ss_pred h-----cCCCEEEecCCccccCC
Q psy5825 420 L-----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~ 437 (596)
+ .|+.+++++||.|.++.
T Consensus 175 a~el~~~gI~v~~v~PG~v~t~~ 197 (324)
T 3u9l_A 175 ARELSRWGIETSIIVPGAFTSGT 197 (324)
T ss_dssp HHHHHTTTEEEEEEEECCC----
T ss_pred HHHhhhhCcEEEEEECCccccCc
Confidence 6 58999999999997653
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.27 E-value=3.7e-11 Score=118.52 Aligned_cols=146 Identities=12% Similarity=0.088 Sum_probs=99.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---------cccEEEEcCccCC-h-------hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---------HIHVIIHAAASLR-F-------DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---------~vd~ViH~AA~v~-~-------~~~~~~~~~~NV~GT~~LL~~a 339 (596)
.++.++.+|++++. .+..+++ .+|+||||||... + ...+..++.+|+.|+.+|++++
T Consensus 51 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~ 124 (250)
T 1yo6_A 51 SRVHVLPLTVTCDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL 124 (250)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHT
T ss_pred CceEEEEeecCCHH------HHHHHHHHHHHhcCCCCCcEEEECCcccCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 57899999999653 3555554 7999999999765 1 2335568899999999999988
Q ss_pred Hhc---C------C-----CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchH
Q psy5825 340 TRC---S------Q-----LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSY 405 (596)
Q Consensus 340 ~~~---~------~-----vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y 405 (596)
... . + ..+||++||...+...... ..+ .. ....|
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~iv~isS~~~~~~~~~~--~~~-----------------------------~~-~~~~Y 172 (250)
T 1yo6_A 125 LPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNTS--GSA-----------------------------QF-PVLAY 172 (250)
T ss_dssp HHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCCS--TTS-----------------------------SS-CBHHH
T ss_pred HHHHhhcccccCCCcccCCCcEEEEeccCccccCCccc--ccc-----------------------------cC-CccHH
Confidence 652 1 3 6799999998775431100 000 00 22569
Q ss_pred HHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHH
Q psy5825 406 SFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVD 480 (596)
Q Consensus 406 ~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVD 480 (596)
+.||++.+.+++.++ .|+.+++++||.|.++.. . . ..+++++
T Consensus 173 ~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~~~----------~-----------~------------~~~~~~~ 219 (250)
T 1yo6_A 173 RMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWVQTNLG----------G-----------K------------NAALTVE 219 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC----------------------------------------------H
T ss_pred HHHHHHHHHHHHHHHHHhccCCeEEEEEcCCceecCCC----------C-----------C------------CCCCCHH
Confidence 999999999998766 489999999999865421 0 0 1357899
Q ss_pred HHHHHHHHHHHhh
Q psy5825 481 VATNMMLGVVWKT 493 (596)
Q Consensus 481 dva~aii~~~~~~ 493 (596)
++|++++.++...
T Consensus 220 ~~a~~~~~~~~~~ 232 (250)
T 1yo6_A 220 QSTAELISSFNKL 232 (250)
T ss_dssp HHHHHHHHHHTTC
T ss_pred HHHHHHHHHHhcc
Confidence 9999999998654
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-11 Score=127.26 Aligned_cols=181 Identities=13% Similarity=0.070 Sum_probs=123.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+..++++|+.|+.++++++...
T Consensus 86 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 159 (322)
T 3qlj_A 86 GEAVADGSNVADWD------QAAGLIQTAVETFGGLDVLVNNAGIVRDRMIANTSEEEFDAVIAVHLKGHFATMRHAAAY 159 (322)
T ss_dssp CEEEEECCCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57889999999653 3555554 78999999998642 1235568999999999999988642
Q ss_pred C---------CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHH
Q psy5825 343 S---------QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413 (596)
Q Consensus 343 ~---------~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE 413 (596)
- .-.+||++||++.+.... ....|+.||++.+
T Consensus 160 ~~~~~~~~~~~~g~IV~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~ 200 (322)
T 3qlj_A 160 WRGLSKAGKAVDGRIINTSSGAGLQGSV---------------------------------------GQGNYSAAKAGIA 200 (322)
T ss_dssp HHHHHHTTCCCCEEEEEECCHHHHHCBT---------------------------------------TCHHHHHHHHHHH
T ss_pred HHHccccCCCCCcEEEEEcCHHHccCCC---------------------------------------CCccHHHHHHHHH
Confidence 0 014899999987653210 1246999999999
Q ss_pred HHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHH
Q psy5825 414 SVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLG 488 (596)
Q Consensus 414 ~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~ 488 (596)
.+++.++ .|+.++++.|| +..+.... ... ..+. .....+.++.++|+|++++.
T Consensus 201 ~l~~~la~e~~~~gI~vn~v~PG-~~t~~~~~-------~~~--~~~~------------~~~~~~~~~~pedva~~v~~ 258 (322)
T 3qlj_A 201 TLTLVGAAEMGRYGVTVNAIAPS-ARTRMTET-------VFA--EMMA------------TQDQDFDAMAPENVSPLVVW 258 (322)
T ss_dssp HHHHHHHHHHGGGTEEEEEEEEC-TTSCCSCC-------SCC--C--------------------CCTTCGGGTHHHHHH
T ss_pred HHHHHHHHHhcccCcEEEEecCC-CCCccchh-------hhh--hhhh------------ccccccCCCCHHHHHHHHHH
Confidence 9987765 68999999999 64432211 000 0000 01122356788999999998
Q ss_pred HHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcc-----------------cHHHHHHHHHHHcc
Q psy5825 489 VVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPI-----------------TWLEYMNSVQAAGK 542 (596)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~v-----------------t~~el~~~l~~~~~ 542 (596)
++...... ..|++|++.+| ..+ ++.+|+..+.+.++
T Consensus 259 L~s~~~~~----------------itG~~i~vdGG--~~~~~~~~~~~~~~~~~~~~~~~el~~~~~~~~~ 311 (322)
T 3qlj_A 259 LGSAEARD----------------VTGKVFEVEGG--KIRVAEGWAHGPQIDKGARWDPAELGPVVADLLG 311 (322)
T ss_dssp HTSGGGGG----------------CCSCEEEEETT--EEEEEECCEEEEEEECSSCCCGGGHHHHHHHHHH
T ss_pred HhCccccC----------------CCCCEEEECCC--ccccCCCcccccccCccCCCCHHHHHHHHHHHhh
Confidence 87543321 36889999887 333 66889988888776
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.27 E-value=8.4e-11 Score=118.99 Aligned_cols=169 Identities=14% Similarity=0.104 Sum_probs=107.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCC--h-------hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLR--F-------DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~--~-------~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++.. +..+++ .+|+|||+||... . ...+..++++|+.|+.++++++.
T Consensus 79 ~~~~~~~~Dv~d~~~------v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~ 152 (280)
T 4da9_A 79 ARVIFLRADLADLSS------HQATVDAVVAEFGRIDCLVNNAGIASIVRDDFLDLKPENFDTIVGVNLRGTVFFTQAVL 152 (280)
T ss_dssp CCEEEEECCTTSGGG------HHHHHHHHHHHHSCCCEEEEECC------CCGGGCCHHHHHHHTTTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHHH------HHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 579999999998653 555544 7899999999732 1 13345678899999999999886
Q ss_pred hc---CC---CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHH
Q psy5825 341 RC---SQ---LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGES 414 (596)
Q Consensus 341 ~~---~~---vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~ 414 (596)
.. .+ ..+||++||++.+.... ....|+.||++.+.
T Consensus 153 ~~~~~~~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~ 193 (280)
T 4da9_A 153 KAMLASDARASRSIINITSVSAVMTSP---------------------------------------ERLDYCMSKAGLAA 193 (280)
T ss_dssp HHHHHHCCCCCEEEEEECCC----------------------------------------------CCHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCEEEEEcchhhccCCC---------------------------------------CccHHHHHHHHHHH
Confidence 52 11 45899999987653210 12469999999999
Q ss_pred HHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHH
Q psy5825 415 VVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGV 489 (596)
Q Consensus 415 lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~ 489 (596)
+++.++ .|+++++++||.|.++...... ......+..+ ......+..++|+|++++.+
T Consensus 194 l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~~---------~~~~~~~~~~--------~~p~~r~~~pedvA~~v~~L 256 (280)
T 4da9_A 194 FSQGLALRLAETGIAVFEVRPGIIRSDMTAAVS---------GKYDGLIESG--------LVPMRRWGEPEDIGNIVAGL 256 (280)
T ss_dssp HHHHHHHHHTTTTEEEEEEEECCBCC---------------------------------------CCBCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCcEEEEEeecCCcCCchhhcc---------hhHHHHHhhc--------CCCcCCcCCHHHHHHHHHHH
Confidence 988765 6899999999999775432110 0000000000 11123467899999999998
Q ss_pred HHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 490 VWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
+...... ..|+++++.+|
T Consensus 257 ~s~~~~~----------------itG~~i~vdGG 274 (280)
T 4da9_A 257 AGGQFGF----------------ATGSVIQADGG 274 (280)
T ss_dssp HTSTTGG----------------GTTCEEEESTT
T ss_pred hCccccC----------------CCCCEEEECCC
Confidence 8643321 35899999887
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=99.27 E-value=1.4e-10 Score=116.15 Aligned_cols=169 Identities=9% Similarity=-0.022 Sum_probs=117.6
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~a 339 (596)
++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+.+|+.|+.+|++++
T Consensus 60 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~ 133 (266)
T 3oig_A 60 DSIILPCDVTNDA------EIETCFASIKEQVGVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAA 133 (266)
T ss_dssp CCEEEECCCSSSH------HHHHHHHHHHHHHSCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CceEEeCCCCCHH------HHHHHHHHHHHHhCCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHH
Confidence 7899999999764 3555543 68999999997541 1234568899999999999999
Q ss_pred Hhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 340 TRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 340 ~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
... ....+||++||.+.+.... ....|+.||++.+.+++.
T Consensus 134 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~ 174 (266)
T 3oig_A 134 RPMMTEGGSIVTLTYLGGELVMP---------------------------------------NYNVMGVAKASLDASVKY 174 (266)
T ss_dssp GGGCTTCEEEEEEECGGGTSCCT---------------------------------------TTHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCceEEEEecccccccCC---------------------------------------CcchhHHHHHHHHHHHHH
Confidence 863 2235899999987654210 124699999999999877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.+++++||.|..+.... ......++..+... . + ...+..++|+|++++.++...
T Consensus 175 la~e~~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~-~---~-----~~~~~~p~dva~~v~~l~s~~ 238 (266)
T 3oig_A 175 LAADLGKENIRVNSISAGPIRTLSAKG-------ISDFNSILKDIEER-A---P-----LRRTTTPEEVGDTAAFLFSDM 238 (266)
T ss_dssp HHHHHGGGTEEEEEEEECCCCSGGGTT-------CTTHHHHHHHHHHH-S---T-----TSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHHhhcCcEEEEEecCccccccccc-------ccchHHHHHHHHhc-C---C-----CCCCCCHHHHHHHHHHHcCCc
Confidence 65 58999999999997754321 11112222222211 1 1 124678999999999998654
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.+|
T Consensus 239 ~~~----------------~tG~~i~vdGG 252 (266)
T 3oig_A 239 SRG----------------ITGENLHVDSG 252 (266)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hhc----------------CcCCEEEECCC
Confidence 321 36899999887
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=99.27 E-value=2.9e-11 Score=123.27 Aligned_cols=170 Identities=14% Similarity=0.077 Sum_probs=116.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..++ ..+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 100 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 173 (294)
T 3r3s_A 100 RKAVLLPGDLSDES------FARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIP 173 (294)
T ss_dssp CCEEECCCCTTSHH------HHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57899999999653 355444 368999999997431 123456899999999999999986
Q ss_pred c-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 C-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 ~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
. ....+||++||+.++.... ....|+.||++.+.+++.++
T Consensus 174 ~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~la 214 (294)
T 3r3s_A 174 LLPKGASIITTSSIQAYQPSP---------------------------------------HLLDYAATKAAILNYSRGLA 214 (294)
T ss_dssp GCCTTCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCEEEEECChhhccCCC---------------------------------------CchHHHHHHHHHHHHHHHHH
Confidence 2 2234899999998765311 12469999999999988765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+++++++||.|.++.... +. .. ...+.. .........+..++|+|++++.++.....
T Consensus 215 ~e~~~~gI~vn~v~PG~v~t~~~~~--~~----~~-~~~~~~---------~~~~~p~~r~~~p~dvA~~v~~L~s~~~~ 278 (294)
T 3r3s_A 215 KQVAEKGIRVNIVAPGPIWTALQIS--GG----QT-QDKIPQ---------FGQQTPMKRAGQPAELAPVYVYLASQESS 278 (294)
T ss_dssp HHHGGGTCEEEEEEECSBCSHHHHT--TT----SC-GGGSTT---------TTTTSTTSSCBCGGGGHHHHHHHHSGGGT
T ss_pred HHHhhcCeEEEEEecCcCccccccc--cC----CC-HHHHHH---------HHhcCCCCCCcCHHHHHHHHHHHhCcccc
Confidence 58999999999998753100 00 00 000000 01111223467789999999988854332
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|++|++.+|
T Consensus 279 ~----------------itG~~i~vdGG 290 (294)
T 3r3s_A 279 Y----------------VTAEVHGVCGG 290 (294)
T ss_dssp T----------------CCSCEEEESTT
T ss_pred C----------------CCCCEEEECCC
Confidence 1 36899999988
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=99.26 E-value=3.7e-11 Score=120.72 Aligned_cols=155 Identities=14% Similarity=0.094 Sum_probs=104.1
Q ss_pred ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh---cCCCceEEEecCcccccCCccccccccCCCC
Q psy5825 303 HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR---CSQLKAILHVSTLYTHSYREDIQEEFYPPLF 372 (596)
Q Consensus 303 ~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~ 372 (596)
..+|+|||+||.... ...+...+++|+.|+.++++++.. ..+..+||++||.+.+....
T Consensus 93 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~----------- 161 (266)
T 3uxy_A 93 GRLDIVVNNAGVISRGRITETTDADWSLSLGVNVEAPFRICRAAIPLMAAAGGGAIVNVASCWGLRPGP----------- 161 (266)
T ss_dssp SCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCSBTTBCCT-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEECCHHhCCCCC-----------
Confidence 368999999998642 133456889999999999999842 13567999999987654210
Q ss_pred ChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCC
Q psy5825 373 SYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNN 447 (596)
Q Consensus 373 ~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~ 447 (596)
....|+.||++.+.+++.++ .|+.+++++||.|.++..... +...
T Consensus 162 ----------------------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~~~~~--~~~~ 211 (266)
T 3uxy_A 162 ----------------------------GHALYCLTKAALASLTQCMGMDHAPQGIRINAVCPNEVNTPMLRTG--FAKR 211 (266)
T ss_dssp ----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCHHHHHH--HHHT
T ss_pred ----------------------------CChHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEeeCCCcchHhhhh--hhcc
Confidence 12469999999999998765 589999999999977532100 0000
Q ss_pred CCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 448 LYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 448 ~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...+...+..+. .......+..++|+|++++.++...... ..|++|++.+|
T Consensus 212 ~~~~~~~~~~~~---------~~~p~~r~~~pedvA~~v~~L~s~~~~~----------------itG~~i~vdGG 262 (266)
T 3uxy_A 212 GFDPDRAVAELG---------RTVPLGRIAEPEDIADVVLFLASDAARY----------------LCGSLVEVNGG 262 (266)
T ss_dssp TCCHHHHHHHHH---------TTSTTSSCBCHHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred cccchHHHHHHH---------hcCCCCCCcCHHHHHHHHHHHhCchhcC----------------CcCCEEEECcC
Confidence 000111111111 1122346789999999999988654321 36899999988
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.26 E-value=5.5e-11 Score=121.43 Aligned_cols=185 Identities=15% Similarity=0.099 Sum_probs=121.4
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-----h----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-----D----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-----~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
++.++.+|++++. .+..+++ .+|+|||+||.... . ..+...+++|+.|+.++++++..
T Consensus 79 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 152 (297)
T 1xhl_A 79 KINAVVADVTEAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTKE 152 (297)
T ss_dssp GEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred eEEEEecCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCcCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHH
Confidence 7899999999653 3555544 68999999997532 1 23456899999999999999875
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+ .+||++||..++.... + ....|+.||+..+.+++.
T Consensus 153 ~~~~~~-g~IV~isS~~~~~~~~-------~-------------------------------~~~~Y~asKaa~~~l~~~ 193 (297)
T 1xhl_A 153 HLIKTK-GEIVNVSSIVAGPQAH-------S-------------------------------GYPYYACAKAALDQYTRC 193 (297)
T ss_dssp HHHHTT-CEEEEECCGGGSSSCC-------T-------------------------------TSHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CEEEEEcCchhccCCC-------C-------------------------------CcchHHHHHHHHHHHHHH
Confidence 2 23 7999999987754210 0 124699999999999877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcH--HH-HHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPG--GA-AAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~--~l-~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
++ .|+++++++||.|.++.... ...+. .+ ...........+ ....++.++|+|++++.++
T Consensus 194 la~el~~~gI~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-----p~~r~~~pedvA~~v~~l~ 261 (297)
T 1xhl_A 194 TAIDLIQHGVRVNSVSPGAVATGFMGA-------MGLPETASDKLYSFIGSRKECI-----PVGHCGKPEEIANIIVFLA 261 (297)
T ss_dssp HHHHHGGGTCEEEEEEECCBCSSHHHH-------TTCCHHHHHHHHHHHHHCTTTC-----TTSSCBCHHHHHHHHHHHH
T ss_pred HHHHhcccCeEEEEEeeCCCcCccccc-------cccccccccchHHHHHHHHhcC-----CCCCCcCHHHHHHHHHHHh
Confidence 65 68999999999997753210 00000 00 000111111001 1234789999999999988
Q ss_pred Hhh-hccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHH
Q psy5825 491 WKT-ALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSV 537 (596)
Q Consensus 491 ~~~-~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l 537 (596)
... ... ..|++|++.+| ..+.+.+....+
T Consensus 262 s~~~~~~----------------itG~~i~vdGG--~~~~~~~~~~~~ 291 (297)
T 1xhl_A 262 DRNLSSY----------------IIGQSIVADGG--STLVMGMQTHDL 291 (297)
T ss_dssp CHHHHTT----------------CCSCEEEESTT--GGGCCGGGGSCH
T ss_pred CCcccCC----------------ccCcEEEECCC--ccccccccccch
Confidence 653 221 36889999988 555544433333
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.1e-10 Score=117.56 Aligned_cols=169 Identities=12% Similarity=0.050 Sum_probs=114.6
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~a 339 (596)
.+.++.+|++++. .+..+++ .+|+|||+||.... ...+...+.+|+.|+.+|++++
T Consensus 57 ~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~ 130 (275)
T 2pd4_A 57 SPYVYELDVSKEE------HFKSLYNSVKKDLGSLDFIVHSVAFAPKEALEGSLLETSKSAFNTAMEISVYSLIELTNTL 130 (275)
T ss_dssp CCCEEECCTTCHH------HHHHHHHHHHHHTSCEEEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CcEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCccccCCCCcccCCHHHHHHHHHHHhHHHHHHHHHH
Confidence 4778999999653 3555544 67999999997642 1234568899999999999999
Q ss_pred Hhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 340 TRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 340 ~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
... ....+||++||.+.+.... ....|+.||++.+.+++.
T Consensus 131 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~ 171 (275)
T 2pd4_A 131 KPLLNNGASVLTLSYLGSTKYMA---------------------------------------HYNVMGLAKAALESAVRY 171 (275)
T ss_dssp GGGEEEEEEEEEEECGGGTSBCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhccCCEEEEEecchhcCCCC---------------------------------------CchhhHHHHHHHHHHHHH
Confidence 862 1125899999977643210 124699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.+++++||.|.++.... ......+...+... .+ ..-+...+|+|++++.++...
T Consensus 172 la~e~~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~----~p-----~~~~~~p~dva~~~~~l~s~~ 235 (275)
T 2pd4_A 172 LAVDLGKHHIRVNALSAGPIRTLASSG-------IADFRMILKWNEIN----AP-----LRKNVSLEEVGNAGMYLLSSL 235 (275)
T ss_dssp HHHHHHTTTCEEEEEEECCCCCTTGGG-------STTHHHHHHHHHHH----ST-----TSSCCCHHHHHHHHHHHHSGG
T ss_pred HHHHhhhcCeEEEEEeeCccccchhhh-------ccccHHHHHHHHhc----CC-----cCCCCCHHHHHHHHHHHhCcc
Confidence 65 58999999999998764311 11111222111111 11 113578899999999988543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.++
T Consensus 236 ~~~----------------~tG~~~~vdgg 249 (275)
T 2pd4_A 236 SSG----------------VSGEVHFVDAG 249 (275)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred ccC----------------CCCCEEEECCC
Confidence 221 35889998877
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.8e-10 Score=115.15 Aligned_cols=170 Identities=14% Similarity=0.065 Sum_probs=118.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 127 (258)
T 3oid_A 54 VKVLVVKANVGQPA------KIKEMFQQIDETFGRLDVFVNNAASGVLRPVMELEETHWDWTMNINAKALLFCAQEAAKL 127 (258)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57999999999654 3555554 46999999986432 1234568899999999999998531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||++.+.... ....|+.||++.+.+++.+
T Consensus 128 m~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 168 (258)
T 3oid_A 128 MEKNGGGHIVSISSLGSIRYLE---------------------------------------NYTTVGVSKAALEALTRYL 168 (258)
T ss_dssp HHTTTCEEEEEEEEGGGTSBCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEECchhhCCCCC---------------------------------------CcHHHHHHHHHHHHHHHHH
Confidence 3457999999987654210 2246999999999999877
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+++++||.|..+.... +.....+...+..+ .+ ...+..++|+|++++.++....
T Consensus 169 a~e~~~~gi~vn~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~----~p-----~~r~~~~~dva~~v~~L~s~~~ 232 (258)
T 3oid_A 169 AVELSPKQIIVNAVSGGAIDTDALKH-------FPNREDLLEDARQN----TP-----AGRMVEIKDMVDTVEFLVSSKA 232 (258)
T ss_dssp HHHTGGGTEEEEEEEECCBCSGGGGG-------CTTHHHHHHHHHHH----CT-----TSSCBCHHHHHHHHHHHTSSTT
T ss_pred HHHHhhcCcEEEEEeeCCCcChhhhh-------cccCHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 6 58999999999997754311 11111222222211 11 2357889999999998875432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 233 ~~----------------itG~~i~vdGG 245 (258)
T 3oid_A 233 DM----------------IRGQTIIVDGG 245 (258)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------ccCCEEEECCC
Confidence 21 36899999988
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1.4e-10 Score=118.10 Aligned_cols=170 Identities=8% Similarity=0.002 Sum_probs=116.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+.+|+.|+.+++++
T Consensus 81 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~ 154 (293)
T 3grk_A 81 GAFVAGHCDVADAA------SIDAVFETLEKKWGKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRR 154 (293)
T ss_dssp TCEEEEECCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CCceEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHH
Confidence 56899999999653 3555554 68999999997641 123456889999999999999
Q ss_pred HHh-cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 339 ATR-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 339 a~~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
+.. +....+||++||.+.+.... ....|+.||++.+.+++
T Consensus 155 ~~~~m~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~ 195 (293)
T 3grk_A 155 AEKLMADGGSILTLTYYGAEKVMP---------------------------------------NYNVMGVAKAALEASVK 195 (293)
T ss_dssp HHHHTTTCEEEEEEECGGGTSBCT---------------------------------------TTTHHHHHHHHHHHHHH
T ss_pred HHHhccCCCEEEEEeehhhccCCC---------------------------------------chHHHHHHHHHHHHHHH
Confidence 976 22346999999988754211 22569999999999988
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++ .|+.+++++||.|..+.... ......+...+... .+ ...+..++|+|++++.++..
T Consensus 196 ~la~e~~~~gI~vn~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~----~p-----~~r~~~pedvA~~v~~L~s~ 259 (293)
T 3grk_A 196 YLAVDLGPQNIRVNAISAGPIKTLAASG-------IGDFRYILKWNEYN----AP-----LRRTVTIDEVGDVGLYFLSD 259 (293)
T ss_dssp HHHHHHGGGTEEEEEEEECCCCC-------------CCHHHHHHHHHHH----ST-----TSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHhHhCCEEEEEecCCCcchhhhc-------ccchHHHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHcCc
Confidence 765 68999999999998764321 11111222221111 11 12467889999999998865
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|++|++.+|
T Consensus 260 ~~~~----------------itG~~i~vdGG 274 (293)
T 3grk_A 260 LSRS----------------VTGEVHHADSG 274 (293)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred cccC----------------CcceEEEECCC
Confidence 3321 36899999888
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=99.26 E-value=1e-10 Score=116.85 Aligned_cols=177 Identities=12% Similarity=0.054 Sum_probs=114.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+..++.+|+.|+.++++++...
T Consensus 55 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 128 (260)
T 1x1t_A 55 VKVLYDGADLSKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH 128 (260)
T ss_dssp SCEEEECCCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999653 4555554 68999999997542 1235668899999999999988531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||..++.... ....|+.||+..+.+++.+
T Consensus 129 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 169 (260)
T 1x1t_A 129 MKKQGFGRIINIASAHGLVASA---------------------------------------NKSAYVAAKHGVVGFTKVT 169 (260)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEECcHHhCcCCC---------------------------------------CCchHHHHHHHHHHHHHHH
Confidence 2467999999988754210 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccc-cCCCCCC--cHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVG-WSNNLYG--PGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G-~~~~~~~--~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+ .|+++++++||.|.++....... +... .+ ...++..+... .. ....++.++|+|++++.++.
T Consensus 170 a~e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~-~~~~~~~~~~~~~~~---~~-----p~~~~~~p~dva~~~~~l~s 240 (260)
T 1x1t_A 170 ALETAGQGITANAICPGWVRTPLVEKQISALAEK-NGVDQETAARELLSE---KQ-----PSLQFVTPEQLGGTAVFLAS 240 (260)
T ss_dssp HHHHTTTTEEEEEEEECCBCC-------------------------CHHH---HC-----TTCCCBCHHHHHHHHHHHHS
T ss_pred HHHhccCCEEEEEEeecCccCchHHHhhhhhccc-cCCchHHHHHHHhhc---cC-----CCCCCcCHHHHHHHHHHHhC
Confidence 5 58999999999998864321100 0000 00 00000000000 01 12357899999999999885
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.+|
T Consensus 241 ~~~~~----------------~tG~~~~vdgG 256 (260)
T 1x1t_A 241 DAAAQ----------------ITGTTVSVDGG 256 (260)
T ss_dssp GGGTT----------------CCSCEEEESTT
T ss_pred hhhcC----------------CCCCEEEECCC
Confidence 43221 35889999887
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.3e-10 Score=117.35 Aligned_cols=174 Identities=11% Similarity=0.094 Sum_probs=117.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+..++.+|+.|+.++++++...
T Consensus 73 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 146 (277)
T 4dqx_A 73 SKAFGVRVDVSSAK------DAESMVEKTTAKWGRVDVLVNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPV 146 (277)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 67899999999653 4555554 68999999997532 1345568899999999999988541
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||..++.... ....|+.||++.+.+++.+
T Consensus 147 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 187 (277)
T 4dqx_A 147 MRRNGGGSIINTTSYTATSAIA---------------------------------------DRTAYVASKGAISSLTRAM 187 (277)
T ss_dssp HTTTTCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECchhhCcCCC---------------------------------------CChhHHHHHHHHHHHHHHH
Confidence 3456999999988764211 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+++++||.|.++..... +. ....+..+...+. .......+..++|+|++++.++....
T Consensus 188 a~e~~~~gi~vn~v~PG~v~T~~~~~~--~~-~~~~~~~~~~~~~---------~~~~~~r~~~pedvA~~v~~L~s~~~ 255 (277)
T 4dqx_A 188 AMDHAKEGIRVNAVAPGTIDSPYFTKI--FA-EAKDPAKLRSDFN---------ARAVMDRMGTAEEIAEAMLFLASDRS 255 (277)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHHH--HH-TCSCHHHHHHHHH---------TTSTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhhhcCeEEEEEeeCcCcCchhhhh--cc-cccchhHHHHHHH---------hcCcccCCcCHHHHHHHHHHHhCCcc
Confidence 5 589999999999976421000 00 0001111111111 11223357789999999999886543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 256 ~~----------------itG~~i~vdGG 268 (277)
T 4dqx_A 256 RF----------------ATGSILTVDGG 268 (277)
T ss_dssp TT----------------CCSCEEEESSS
T ss_pred CC----------------CcCCEEEECCc
Confidence 21 36899999988
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.25 E-value=2.6e-10 Score=115.44 Aligned_cols=177 Identities=11% Similarity=0.014 Sum_probs=120.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 57 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 130 (280)
T 3tox_A 57 GEAAALAGDVGDEA------LHEALVELAVRRFGGLDTAFNNAGALGAMGEISSLSVEGWRETLDTNLTSAFLAAKYQVP 130 (280)
T ss_dssp CCEEECCCCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57899999999654 3555554 68999999997532 123566899999999999999864
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||+..+.... + ....|+.||++.+.+++.
T Consensus 131 ~~~~~~~g~iv~isS~~~~~~~~-------~-------------------------------~~~~Y~asKaa~~~l~~~ 172 (280)
T 3tox_A 131 AIAALGGGSLTFTSSFVGHTAGF-------A-------------------------------GVAPYAASKAGLIGLVQA 172 (280)
T ss_dssp HHHHTTCEEEEEECCSBTTTBCC-------T-------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEcChhhCcCCC-------C-------------------------------CchhHHHHHHHHHHHHHH
Confidence 2 3456999999987762100 0 124699999999999887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.+++++||.|.++..... + .. . ..... ...... .....+..++|+|++++.++...
T Consensus 173 la~e~~~~gIrvn~v~PG~v~T~~~~~~--~-~~-~-~~~~~-~~~~~~--------~p~~r~~~pedvA~~v~~L~s~~ 238 (280)
T 3tox_A 173 LAVELGARGIRVNALLPGGTDTPANFAN--L-PG-A-APETR-GFVEGL--------HALKRIARPEEIAEAALYLASDG 238 (280)
T ss_dssp HHHHHHTTTEEEEEEEECSBSSTTSGGG--S-TT-C-CTHHH-HHHHTT--------STTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHhhhcCeEEEEEEECCCCCchhhhh--c-cc-c-CHHHH-HHHhcc--------CccCCCcCHHHHHHHHHHHhCcc
Confidence 66 589999999999988643210 0 00 0 11111 111111 11235788999999999988654
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
... ..|++|++.+| ..++
T Consensus 239 a~~----------------itG~~i~vdGG--~~~~ 256 (280)
T 3tox_A 239 ASF----------------VTGAALLADGG--ASVT 256 (280)
T ss_dssp GTT----------------CCSCEEEESTT--GGGC
T ss_pred ccC----------------CcCcEEEECCC--cccc
Confidence 321 36899999998 4444
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=99.25 E-value=1.9e-10 Score=114.19 Aligned_cols=168 Identities=11% Similarity=0.063 Sum_probs=116.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 55 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 128 (248)
T 3op4_A 55 DNGKGMALNVTNPE------SIEAVLKAITDEFGGVDILVNNAGITRDNLLMRMKEEEWSDIMETNLTSIFRLSKAVLRG 128 (248)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccceEEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 46788999999653 4555554 78999999997642 1345568999999999999998641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+.+.... ....|+.||+..+.+.+.+
T Consensus 129 m~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~l~~~l 169 (248)
T 3op4_A 129 MMKKRQGRIINVGSVVGTMGNA---------------------------------------GQANYAAAKAGVIGFTKSM 169 (248)
T ss_dssp HHHHTCEEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEcchhhcCCCC---------------------------------------CChHHHHHHHHHHHHHHHH
Confidence 2457999999987643210 1246999999888888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|..+.... . .......+..+ .....+..++|+|++++.++....
T Consensus 170 a~e~~~~gi~vn~v~PG~v~T~~~~~-------~--~~~~~~~~~~~---------~p~~r~~~p~dva~~v~~L~s~~~ 231 (248)
T 3op4_A 170 AREVASRGVTVNTVAPGFIETDMTKA-------L--NDEQRTATLAQ---------VPAGRLGDPREIASAVAFLASPEA 231 (248)
T ss_dssp HHHHGGGTEEEEEEEECSBSSTTTTT-------S--CHHHHHHHHHT---------CTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHhCeEEEEEeeCCCCCchhhh-------c--CHHHHHHHHhc---------CCCCCCcCHHHHHHHHHHHcCCcc
Confidence 5 68999999999997653211 1 11111111111 112357899999999998885433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.+|
T Consensus 232 ~~----------------itG~~i~vdgG 244 (248)
T 3op4_A 232 AY----------------ITGETLHVNGG 244 (248)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------ccCcEEEECCC
Confidence 21 36899999887
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=99.25 E-value=8.9e-11 Score=117.10 Aligned_cols=177 Identities=14% Similarity=0.060 Sum_probs=119.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (255)
T 4eso_A 54 PRVHALRSDIADLN------EIAVLGAAAGQTLGAIDLLHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPL 127 (255)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CcceEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999654 344443 368999999997642 1235568999999999999999762
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....+||++||.+.+.... ....|+.||+..+.+.+.++
T Consensus 128 ~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~la~ 168 (255)
T 4eso_A 128 IREGGSIVFTSSVADEGGHP---------------------------------------GMSVYSASKAALVSFASVLAA 168 (255)
T ss_dssp EEEEEEEEEECCGGGSSBCT---------------------------------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEECChhhcCCCC---------------------------------------CchHHHHHHHHHHHHHHHHHH
Confidence 1235899999988764211 12469999999999988766
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+.+++++||.|..+..... ++ .......+....... . ....+..++|+|++++.++.. ...
T Consensus 169 e~~~~gi~vn~v~PG~v~T~~~~~~-~~---~~~~~~~~~~~~~~~---~-----p~~r~~~pedvA~~v~~L~s~-~~~ 235 (255)
T 4eso_A 169 ELLPRGIRVNSVSPGFIDTPTKGVA-GI---TEAERAEFKTLGDNI---T-----PMKRNGTADEVARAVLFLAFE-ATF 235 (255)
T ss_dssp HTGGGTCEEEEEEECSBCCSSTTCT-TS---CHHHHHHHHHHHHHH---S-----TTSSCBCHHHHHHHHHHHHHT-CTT
T ss_pred HHhhhCcEEEEEecCcccCcccccc-cC---ChhhHHHHHHHHhcc---C-----CCCCCcCHHHHHHHHHHHcCc-CcC
Confidence 589999999999987643210 00 000001111111111 1 123467899999999988764 221
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
..|+++++.+| ...+
T Consensus 236 ----------------itG~~i~vdGG--~~~~ 250 (255)
T 4eso_A 236 ----------------TTGAKLAVDGG--LGQK 250 (255)
T ss_dssp ----------------CCSCEEEESTT--TTTT
T ss_pred ----------------ccCCEEEECCC--cccc
Confidence 46899999988 4444
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=99.25 E-value=1.5e-10 Score=116.92 Aligned_cols=170 Identities=10% Similarity=-0.007 Sum_probs=117.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh------------hhhHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF------------DELIQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~------------~~~~~~~~~~NV~GT~~LL~ 337 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+.+|+.|+.+|++
T Consensus 75 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~ 148 (280)
T 3nrc_A 75 NPAAVLPCDVISDQ------EIKDLFVELGKVWDGLDAIVHSIAFAPRDQLEGNFIDCVTREGFSIAHDISAYSFAALAK 148 (280)
T ss_dssp CCSEEEECCTTCHH------HHHHHHHHHHHHCSSCCEEEECCCCCCGGGSSSCHHHHCCHHHHHHHHHHHTHHHHHHHH
T ss_pred CCceEEEeecCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCcccCCccccccCHHHHHHHHHHHHHHHHHHHH
Confidence 46889999999653 3555554 46999999998643 12345588999999999999
Q ss_pred HHHhc--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 338 LATRC--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 338 ~a~~~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
++... .+..+||++||.+.+.... ....|+.||++.+.+
T Consensus 149 ~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~~ 189 (280)
T 3nrc_A 149 EGRSMMKNRNASMVALTYIGAEKAMP---------------------------------------SYNTMGVAKASLEAT 189 (280)
T ss_dssp HHHHHHTTTTCEEEEEECGGGTSCCT---------------------------------------TTHHHHHHHHHHHHH
T ss_pred HHHHHhhcCCCeEEEEeccccccCCC---------------------------------------CchhhHHHHHHHHHH
Confidence 98752 2356999999987654210 124699999999999
Q ss_pred HHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 416 VEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 416 v~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
++.++ .|+.+++++||.|..+.... ......+...+... . ....++.++|+|++++.++
T Consensus 190 ~~~la~e~~~~gi~v~~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~----~-----p~~~~~~pedvA~~v~~l~ 253 (280)
T 3nrc_A 190 VRYTALALGEDGIKVNAVSAGPIKTLAASG-------ISNFKKMLDYNAMV----S-----PLKKNVDIMEVGNTVAFLC 253 (280)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCCCCSGGGG-------CTTHHHHHHHHHHH----S-----TTCSCCCHHHHHHHHHHTT
T ss_pred HHHHHHHHHHcCcEEEEEeeccccchhhhc-------CcchHHHHHHHHhc----C-----CCCCCCCHHHHHHHHHHHh
Confidence 87665 68999999999998764321 11112222222111 1 1124678999999999887
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|++|++.+|
T Consensus 254 s~~~~~----------------~tG~~i~vdgG 270 (280)
T 3nrc_A 254 SDMATG----------------ITGEVVHVDAG 270 (280)
T ss_dssp SGGGTT----------------CCSCEEEESTT
T ss_pred CcccCC----------------cCCcEEEECCC
Confidence 643321 36899999887
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=99.25 E-value=1.3e-10 Score=116.28 Aligned_cols=167 Identities=14% Similarity=0.075 Sum_probs=111.9
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh------hhHHHHHHHHHHHHHHHHHHHHhc--
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD------ELIQDAFTLNIQATRELLDLATRC-- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~------~~~~~~~~~NV~GT~~LL~~a~~~-- 342 (596)
.+.++.+|++++. .+..+++ .+|+|||+||..... ..+...+++|+.|+.++++++...
T Consensus 72 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~ 145 (260)
T 3gem_A 72 GAVALYGDFSCET------GIMAFIDLLKTQTSSLRAVVHNASEWLAETPGEEADNFTRMFSVHMLAPYLINLHCEPLLT 145 (260)
T ss_dssp TCEEEECCTTSHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTCHHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CCeEEECCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4788999999653 3555554 589999999975321 234568899999999999988641
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+..+||++||...+.... ....|+.||++.+.+++.++
T Consensus 146 ~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~la~ 186 (260)
T 3gem_A 146 ASEVADIVHISDDVTRKGSS---------------------------------------KHIAYCATKAGLESLTLSFAA 186 (260)
T ss_dssp TSSSCEEEEECCGGGGTCCS---------------------------------------SCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCcEEEEECChhhcCCCC---------------------------------------CcHhHHHHHHHHHHHHHHHHH
Confidence 3457999999987654211 12469999999999998876
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
+++.+++++||.|..+... ...+...+.. ..+ ..-+..++|+|++++.++....
T Consensus 187 e~~~~Irvn~v~PG~v~t~~~~-----------~~~~~~~~~~----~~p-----~~r~~~~edva~~v~~L~~~~~--- 243 (260)
T 3gem_A 187 RFAPLVKVNGIAPALLMFQPKD-----------DAAYRANALA----KSA-----LGIEPGAEVIYQSLRYLLDSTY--- 243 (260)
T ss_dssp HHTTTCEEEEEEECTTCC------------------------------CC-----SCCCCCTHHHHHHHHHHHHCSS---
T ss_pred HHCCCCEEEEEeecccccCCCC-----------CHHHHHHHHh----cCC-----CCCCCCHHHHHHHHHHHhhCCC---
Confidence 5699999999999764211 0011111111 111 1234568999999999983221
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
..|++|++.+| ..++
T Consensus 244 ---------------itG~~i~vdGG--~~~~ 258 (260)
T 3gem_A 244 ---------------VTGTTLTVNGG--RHVK 258 (260)
T ss_dssp ---------------CCSCEEEESTT--TTTC
T ss_pred ---------------CCCCEEEECCC--cccC
Confidence 36899999988 4443
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=1.5e-10 Score=115.12 Aligned_cols=168 Identities=11% Similarity=0.022 Sum_probs=116.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|+++.. ++..+++ .+|+|||+||.... ...+..++.+|+.|+.+|++++...
T Consensus 63 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 136 (256)
T 3ezl_A 63 FDFYASEGNVGDWD------STKQAFDKVKAEVGEIDVLVNNAGITRDVVFRKMTREDWQAVIDTNLTSLFNVTKQVIDG 136 (256)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeeEEEecCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999653 3555554 68999999997642 1345668999999999888877431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+.+.... ....|+.||++.+.+++.+
T Consensus 137 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 177 (256)
T 3ezl_A 137 MVERGWGRIINISSVNGQKGQF---------------------------------------GQTNYSTAKAGIHGFTMSL 177 (256)
T ss_dssp HHHHTCEEEEEECCCCGGGSCS---------------------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEcchhhccCCC---------------------------------------CCcccHHHHHHHHHHHHHH
Confidence 3557899999987653210 2246999999998888766
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+++++||.|.++... . ....++..+..+. ....+..++|+|++++.++....
T Consensus 178 a~e~~~~gi~v~~v~PG~v~t~~~~-------~--~~~~~~~~~~~~~---------~~~~~~~~~dva~~~~~l~s~~~ 239 (256)
T 3ezl_A 178 AQEVATKGVTVNTVSPGYIGTDMVK-------A--IRPDVLEKIVATI---------PVRRLGSPDEIGSIVAWLASEES 239 (256)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHH-------T--SCHHHHHHHHHHS---------TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHHHhCCEEEEEEECcccCcccc-------c--cCHHHHHHHHhcC---------CCCCCcCHHHHHHHHHHHhCCcc
Confidence 5 6899999999999765321 1 1122222222211 12347789999999998885433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 240 ~~----------------~tG~~i~vdgG 252 (256)
T 3ezl_A 240 GF----------------STGADFSLNGG 252 (256)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------CcCcEEEECCC
Confidence 21 36899999887
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.25 E-value=7.6e-11 Score=118.16 Aligned_cols=177 Identities=14% Similarity=0.129 Sum_probs=116.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+|+.... ...+...+.+|+.|+.++++++..
T Consensus 60 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 133 (264)
T 3ucx_A 60 RRALSVGTDITDDA------QVAHLVDETMKAYGRVDVVINNAFRVPSMKPFANTTFEHMRDAIELTVFGALRLIQGFTP 133 (264)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCSCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHTHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57999999999654 3555554 68999999987521 123456889999999999998764
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
. .+..+||++||...+.... ....|+.||+..+.+++.+
T Consensus 134 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~l 174 (264)
T 3ucx_A 134 ALEESKGAVVNVNSMVVRHSQA---------------------------------------KYGAYKMAKSALLAMSQTL 174 (264)
T ss_dssp HHHHHTCEEEEECCGGGGCCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCEEEEECcchhccCCC---------------------------------------ccHHHHHHHHHHHHHHHHH
Confidence 1 1126999999987654210 1246999999999998776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccC-CCC-CCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWS-NNL-YGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~-~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|+.+++++||.|+++......... ... .....++..+ ........+..++|+|++++.++..
T Consensus 175 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~p~~r~~~p~dvA~~v~~L~s~ 245 (264)
T 3ucx_A 175 ATELGEKGIRVNSVLPGYIWGGTLKSYFEHQAGKYGTSVEDIYNAA---------AAGSDLKRLPTEDEVASAILFMASD 245 (264)
T ss_dssp HHHHHTTTCEEEEEEESSCBSHHHHHHHHHHHHHTTCCHHHHHHHH---------HTTSSSSSCCBHHHHHHHHHHHHSG
T ss_pred HHHhCccCeEEEEEecCccccccHHHHHHhhhhhcCCCHHHHHHHH---------hccCCcccCCCHHHHHHHHHHHcCc
Confidence 5 6899999999999775321100000 000 0000111111 1122234578999999999998865
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|++|++.+|
T Consensus 246 ~~~~----------------itG~~i~vdGG 260 (264)
T 3ucx_A 246 LASG----------------ITGQALDVNCG 260 (264)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred cccC----------------CCCCEEEECCC
Confidence 3321 36899999887
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=99.24 E-value=9.6e-11 Score=118.47 Aligned_cols=177 Identities=12% Similarity=0.074 Sum_probs=117.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+..++++|+.|+.++++++...
T Consensus 73 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 146 (279)
T 3sju_A 73 HDVDGSSCDVTSTD------EVHAAVAAAVERFGPIGILVNSAGRNGGGETADLDDALWADVLDTNLTGVFRVTREVLRA 146 (279)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHhch
Confidence 57999999999654 3555543 68999999997642 1234568899999999999988641
Q ss_pred -----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 343 -----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 343 -----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
.+..+||++||.+.+.... ....|+.||++.+.+++
T Consensus 147 ~~~~~~~~g~iV~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~ 187 (279)
T 3sju_A 147 GGMREAGWGRIVNIASTGGKQGVM---------------------------------------YAAPYTASKHGVVGFTK 187 (279)
T ss_dssp SSHHHHTCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred hhHhhcCCcEEEEECChhhccCCC---------------------------------------CChhHHHHHHHHHHHHH
Confidence 2457999999987654210 22469999999998887
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCcc-ccCCCCC-CcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIV-GWSNNLY-GPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~-G~~~~~~-~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
.++ .|+++++++||.|.++...... ++..... ....+...+.. ......+..++|+|++++.++
T Consensus 188 ~la~e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~ 258 (279)
T 3sju_A 188 SVGFELAKTGITVNAVCPGYVETPMAERVREGYARHWGVTEQEVHERFNA---------KIPLGRYSTPEEVAGLVGYLV 258 (279)
T ss_dssp HHHHHTGGGTEEEEEEEESSBCSHHHHHHHHSCCSSSCCCHHHHHHHHHT---------TCTTSSCBCHHHHHHHHHHHT
T ss_pred HHHHHHHhhCcEEEEEeeCcccchHHHHHHhhhhhcccCChHHHHHHHHh---------cCCCCCCCCHHHHHHHHHHHh
Confidence 765 6899999999999775321100 0000000 01111111111 112235788999999999887
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|+++++.+|
T Consensus 259 s~~a~~----------------itG~~i~vdGG 275 (279)
T 3sju_A 259 TDAAAS----------------ITAQALNVCGG 275 (279)
T ss_dssp SSGGGG----------------CCSCEEEESTT
T ss_pred CccccC----------------cCCcEEEECCC
Confidence 643321 36899999887
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=1.9e-10 Score=117.31 Aligned_cols=170 Identities=11% Similarity=-0.024 Sum_probs=117.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+||+++. .+..+++ .+|+|||+||.... ...+...+.+|+.|+.+|+++
T Consensus 80 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ 153 (296)
T 3k31_A 80 GVKLTVPCDVSDAE------SVDNMFKVLAEEWGSLDFVVHAVAFSDKNELKGRYVDTSLGNFLTSMHISCYSFTYIASK 153 (296)
T ss_dssp TCCEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CCeEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCcccccCChhhCCHHHHHHHHHHHHHHHHHHHHH
Confidence 45789999999653 4555554 57999999997642 123556889999999999999
Q ss_pred HHhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 339 ATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 339 a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
+... ....+||++||.+.+.... ....|+.||++.+.+++
T Consensus 154 ~~~~m~~~g~IV~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~l~~ 194 (296)
T 3k31_A 154 AEPLMTNGGSILTLSYYGAEKVVP---------------------------------------HYNVMGVCKAALEASVK 194 (296)
T ss_dssp HGGGCTTCEEEEEEECGGGTSCCT---------------------------------------TTTHHHHHHHHHHHHHH
T ss_pred HHHHhhcCCEEEEEEehhhccCCC---------------------------------------CchhhHHHHHHHHHHHH
Confidence 9862 2345899999987654210 22569999999999988
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++ .|+.+++++||.|..+..... .....+...+... .+ ...+...+|+|++++.++..
T Consensus 195 ~la~e~~~~gIrvn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~----~p-----~~r~~~pedvA~~v~fL~s~ 258 (296)
T 3k31_A 195 YLAVDLGKQQIRVNAISAGPVRTLASSGI-------SDFHYILTWNKYN----SP-----LRRNTTLDDVGGAALYLLSD 258 (296)
T ss_dssp HHHHHHHTTTEEEEEEEECCCCCSSCCSC-------HHHHHHHHHHHHH----ST-----TSSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHHhhcCcEEEEEEECCCcCchhhcc-------cchHHHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHcCC
Confidence 765 589999999999987643211 1011111111111 11 12367789999999999865
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|++|++.+|
T Consensus 259 ~a~~----------------itG~~i~vdGG 273 (296)
T 3k31_A 259 LGRG----------------TTGETVHVDCG 273 (296)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred ccCC----------------ccCCEEEECCC
Confidence 3321 36899999888
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=99.24 E-value=3.8e-11 Score=120.83 Aligned_cols=177 Identities=6% Similarity=0.030 Sum_probs=117.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
..+.++.+|++++. ++..+++ .+|+|||+||..... ..+...+++|+.|+.+|++++...
T Consensus 53 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 126 (269)
T 3vtz_A 53 NVSDHFKIDVTNEE------EVKEAVEKTTKKYGRIDILVNNAGIEQYSPLHLTPTEIWRRIIDVNVNGSYLMAKYTIPV 126 (269)
T ss_dssp TSSEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceeEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 45678889998653 3555554 689999999975421 234568899999999999987641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+++.... ....|+.||++.+.+++.+
T Consensus 127 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 167 (269)
T 3vtz_A 127 MLAIGHGSIINIASVQSYAATK---------------------------------------NAAAYVTSKHALLGLTRSV 167 (269)
T ss_dssp HHHHTCEEEEEECCGGGTSBCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECchhhccCCC---------------------------------------CChhHHHHHHHHHHHHHHH
Confidence 2457999999998765311 1246999999999999887
Q ss_pred h----cCCCEEEecCCccccCCCCCcccc-CCCCCCc-HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 420 L----YKLPLAMVRPSIVVSTWKEPIVGW-SNNLYGP-GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 420 ~----~gl~~~IlRp~~V~G~~~~p~~G~-~~~~~~~-~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+ +++.+++++||.|.++........ ....... ...+..+.. ......+..++|+|++++.++...
T Consensus 168 a~e~~~~i~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~ 238 (269)
T 3vtz_A 168 AIDYAPKIRCNAVCPGTIMTPMVIKAAKMEVGEDENAVERKIEEWGR---------QHPMGRIGRPEEVAEVVAFLASDR 238 (269)
T ss_dssp HHHHTTTEEEEEEEECSBCCHHHHHHHHHHHCCSTTHHHHHHHHHHH---------HSTTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHhcCCCEEEEEEECCCcCcchhhhhhccccccchhhHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCCc
Confidence 6 589999999999977532100000 0000000 011111111 112235788999999999988654
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.+|
T Consensus 239 ~~~----------------itG~~i~vdGG 252 (269)
T 3vtz_A 239 SSF----------------ITGACLTVDGG 252 (269)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred cCC----------------CcCcEEEECCC
Confidence 321 36899999988
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=99.24 E-value=4.6e-10 Score=112.61 Aligned_cols=170 Identities=13% Similarity=0.122 Sum_probs=117.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++.. +..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 70 ~~~~~~~~Dv~~~~~------v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 143 (266)
T 4egf_A 70 TDVHTVAIDLAEPDA------PAELARRAAEAFGGLDVLVNNAGISHPQPVVDTDPQLFDATIAVNLRAPALLASAVGKA 143 (266)
T ss_dssp CCEEEEECCTTSTTH------HHHHHHHHHHHHTSCSEEEEECCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHHH------HHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 679999999998763 444443 78999999997642 1235568899999999999998641
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||+..+.... ....|+.||++.+.+++.
T Consensus 144 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~l~~~ 184 (266)
T 4egf_A 144 MVAAGEGGAIITVASAAALAPLP---------------------------------------DHYAYCTSKAGLVMATKV 184 (266)
T ss_dssp HHHHTSCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCeEEEEEcchhhccCCC---------------------------------------CChHHHHHHHHHHHHHHH
Confidence 1246899999988764210 124699999999998877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.+++++||.|..+.... ..........+... + ....+..++|+|++++.++...
T Consensus 185 la~e~~~~gI~vn~v~PG~v~T~~~~~-------~~~~~~~~~~~~~~----~-----p~~r~~~p~dva~~v~~L~s~~ 248 (266)
T 4egf_A 185 LARELGPHGIRANSVCPTVVLTEMGQR-------VWGDEAKSAPMIAR----I-----PLGRFAVPHEVSDAVVWLASDA 248 (266)
T ss_dssp HHHHHGGGTEEEEEEEESCBCSHHHHH-------HTCSHHHHHHHHTT----C-----TTSSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHHhhhCeEEEEEEeCCCcCchhhh-------hccChHHHHHHHhc----C-----CCCCCcCHHHHHHHHHHHhCch
Confidence 65 68999999999997653210 00111111111111 1 1234678999999999988654
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|+++++.+|
T Consensus 249 ~~~----------------itG~~i~vdGG 262 (266)
T 4egf_A 249 ASM----------------INGVDIPVDGG 262 (266)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hcC----------------ccCcEEEECCC
Confidence 321 36899999887
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.24 E-value=2.5e-10 Score=113.70 Aligned_cols=176 Identities=14% Similarity=0.088 Sum_probs=116.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 123 (254)
T 3kzv_A 50 DRFFYVVGDITEDS------VLKQLVNAAVKGHGKIDSLVANAGVLEPVQNVNEIDVNAWKKLYDINFFSIVSLVGIALP 123 (254)
T ss_dssp GGEEEEESCTTSHH------HHHHHHHHHHHHHSCCCEEEEECCCCCCCTTTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHhcCCccEEEECCcccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 57899999999653 3555554 68999999997532 123456889999999999999842
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+ .+||++||...+.... ....|+.||+..+.+.+.
T Consensus 124 ~m~~~~-g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~ 163 (254)
T 3kzv_A 124 ELKKTN-GNVVFVSSDACNMYFS---------------------------------------SWGAYGSSKAALNHFAMT 163 (254)
T ss_dssp HHHHHT-CEEEEECCSCCCCSSC---------------------------------------CSHHHHHHHHHHHHHHHH
T ss_pred HHHhcC-CeEEEEcCchhccCCC---------------------------------------CcchHHHHHHHHHHHHHH
Confidence 1 23 6999999987654211 124699999999999988
Q ss_pred Hh---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh-
Q psy5825 419 YL---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA- 494 (596)
Q Consensus 419 ~~---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~- 494 (596)
++ .|+.+++++||.|..+..................+..+.. .. + ...+..++|+|++++.++....
T Consensus 164 la~e~~~i~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~-~~---~-----~~r~~~p~dva~~v~~L~s~~~~ 234 (254)
T 3kzv_A 164 LANEERQVKAIAVAPGIVDTDMQVNIRENVGPSSMSAEQLKMFRG-LK---E-----NNQLLDSSVPATVYAKLALHGIP 234 (254)
T ss_dssp HHHHCTTSEEEEEECSSCCCCCSCCCCCCCCTTTSCHHHHHHHHH-HH---T-----TC----CHHHHHHHHHHHHHCCC
T ss_pred HHhhccCcEEEEEeCCcccchhHHHhhcccCccccCHHHHHHHHH-HH---h-----cCCcCCcccHHHHHHHHHhhccc
Confidence 77 6899999999999887543221110000001122221111 11 1 1246788999999999886542
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.++
T Consensus 235 ~~----------------itG~~i~vdg~ 247 (254)
T 3kzv_A 235 DG----------------VNGQYLSYNDP 247 (254)
T ss_dssp GG----------------GTTCEEETTCG
T ss_pred CC----------------CCccEEEecCc
Confidence 21 36889998876
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=99.24 E-value=1.2e-10 Score=117.06 Aligned_cols=169 Identities=11% Similarity=0.024 Sum_probs=115.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||..... ..+..++.+|+.|+.+|++++...
T Consensus 75 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 148 (269)
T 3gk3_A 75 RDFKAYAVDVADFE------SCERCAEKVLADFGKVDVLINNAGITRDATFMKMTKGDWDAVMRTDLDAMFNVTKQFIAG 148 (269)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCcchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999654 3555544 789999999976421 245568899999999999988541
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.||++.+.+++.+
T Consensus 149 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~l 189 (269)
T 3gk3_A 149 MVERRFGRIVNIGSVNGSRGAF---------------------------------------GQANYASAKAGIHGFTKTL 189 (269)
T ss_dssp HHHHTCEEEEEECCHHHHHCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEeCChhhccCCC---------------------------------------CcchHHHHHHHHHHHHHHH
Confidence 2457999999987653210 1246999999998888766
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+++++||.|..+.....+ ... ....+ ........+..++|+|++++.++....
T Consensus 190 a~e~~~~gi~v~~v~PG~v~T~~~~~~~---------~~~----~~~~~----~~~~~~~~~~~p~dvA~~v~~L~s~~~ 252 (269)
T 3gk3_A 190 ALETAKRGITVNTVSPGYLATAMVEAVP---------QDV----LEAKI----LPQIPVGRLGRPDEVAALIAFLCSDDA 252 (269)
T ss_dssp HHHHGGGTEEEEEEEECSBCCTTTTC--------------------CCS----GGGCTTSSCBCHHHHHHHHHHHTSTTC
T ss_pred HHHhhhcCCEEEEEecCcccchhhhhhc---------hhH----HHHHh----hhcCCcCCccCHHHHHHHHHHHhCCCc
Confidence 5 5899999999999775432110 000 00000 011122356789999999998875432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 253 ~~----------------itG~~i~vdgG 265 (269)
T 3gk3_A 253 GF----------------VTGADLAINGG 265 (269)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------eeCcEEEECCC
Confidence 21 36899999988
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=99.24 E-value=7.5e-11 Score=118.01 Aligned_cols=176 Identities=13% Similarity=0.062 Sum_probs=108.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+||+++ +.+..+++ .+|+|||+||.... ...+..++.+|+.|+.+|++++...
T Consensus 54 ~~~~~~~~Dl~~~------~~~~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 127 (276)
T 1wma_A 54 LSPRFHQLDIDDL------QSIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL 127 (276)
T ss_dssp CCCEEEECCTTCH------HHHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CeeEEEECCCCCH------HHHHHHHHHHHHhcCCCCEEEECCcccccCCCccccHHHHHhhhheeeeeHHHHHHHHHHh
Confidence 5789999999964 34666555 79999999997532 2445668999999999999999873
Q ss_pred -CCCceEEEecCcccccCCcc----ccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 343 -SQLKAILHVSTLYTHSYRED----IQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~----i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
....+|||+||..++..... ..+.+...+++...+......+.+.......+. .+. ....|+.||++.+.+++
T Consensus 128 ~~~~g~iv~~sS~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~Y~~sK~a~~~~~~ 205 (276)
T 1wma_A 128 IKPQGRVVNVSSIMSVRALKSCSPELQQKFRSETITEEELVGLMNKFVEDTKKGVHQK-EGW-PSSAYGVTKIGVTVLSR 205 (276)
T ss_dssp EEEEEEEEEECCHHHHHHHHTSCHHHHHHHHCSSCCHHHHHHHHHHHHHHHHTTCTTT-TTC-CSCHHHHHHHHHHHHHH
T ss_pred hCCCCEEEEECChhhhcccccCChhHHhhccccccchhhhhhhhhhhhhhhccccccc-CCC-ccchhHHHHHHHHHHHH
Confidence 11249999999887632100 000000111121111111100000000000000 010 12689999999999988
Q ss_pred HHh----c-----CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHH
Q psy5825 418 KYL----Y-----KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLG 488 (596)
Q Consensus 418 ~~~----~-----gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~ 488 (596)
.++ . |+.+++++||.|.++.. .. ..++.++++|.+++.
T Consensus 206 ~la~~~~~~~~~~~i~v~~v~PG~v~t~~~----------~~-----------------------~~~~~~~~~a~~~~~ 252 (276)
T 1wma_A 206 IHARKLSEQRKGDKILLNACCPGWVRTDMA----------GP-----------------------KATKSPEEGAETPVY 252 (276)
T ss_dssp HHHHHHHHHCTTSCCEEEEEECCSBCSTTT----------CT-----------------------TCSBCHHHHTHHHHH
T ss_pred HHHHHhhcccCCCceEEEEecCCccccCcC----------Cc-----------------------cccCChhHhhhhHhh
Confidence 765 2 89999999999966421 00 136899999999999
Q ss_pred HHHhh
Q psy5825 489 VVWKT 493 (596)
Q Consensus 489 ~~~~~ 493 (596)
++...
T Consensus 253 l~~~~ 257 (276)
T 1wma_A 253 LALLP 257 (276)
T ss_dssp HHSCC
T ss_pred hhcCc
Confidence 98643
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=6.5e-11 Score=120.85 Aligned_cols=171 Identities=9% Similarity=0.027 Sum_probs=114.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+..++.+|+.|+.+|+++|...
T Consensus 72 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 145 (303)
T 1yxm_A 72 ARVIPIQCNIRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS 145 (303)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ccEEEEecCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57999999999643 4666554 48999999996431 1234568899999999999998651
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+.++.. ....|+.+|+..+.+...+
T Consensus 146 ~~~~~~~~iv~isS~~~~~~~----------------------------------------~~~~Y~~sK~a~~~~~~~l 185 (303)
T 1yxm_A 146 WMKEHGGSIVNIIVPTKAGFP----------------------------------------LAVHSGAARAGVYNLTKSL 185 (303)
T ss_dssp THHHHCEEEEEECCCCTTCCT----------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCeEEEEEeecccCCC----------------------------------------cchhhHHHHHHHHHHHHHH
Confidence 134789999998732210 1245999999999888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++|||.|+|+... ..+..... ..........+ ...+++++|+|++++.++....
T Consensus 186 a~e~~~~gi~v~~v~Pg~v~t~~~~------~~~~~~~~---~~~~~~~~~~p-----~~~~~~~~dvA~~i~~l~~~~~ 251 (303)
T 1yxm_A 186 ALEWACSGIRINCVAPGVIYSQTAV------ENYGSWGQ---SFFEGSFQKIP-----AKRIGVPEEVSSVVCFLLSPAA 251 (303)
T ss_dssp HHHTGGGTEEEEEEEECSBCCTGGG------TTSGGGGG---GGGTTGGGGST-----TSSCBCTHHHHHHHHHHHSGGG
T ss_pred HHHhcccCeEEEEEecCCcccchhh------hhccccch---HHHHHHHhcCc-----ccCCCCHHHHHHHHHHHhCccc
Confidence 5 4899999999999997310 00000000 00011110111 1247889999999999885432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 252 ~~----------------~~G~~~~v~gG 264 (303)
T 1yxm_A 252 SF----------------ITGQSVDVDGG 264 (303)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cc----------------CCCcEEEECCC
Confidence 21 36889999988
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.23 E-value=2.7e-10 Score=112.75 Aligned_cols=168 Identities=10% Similarity=0.086 Sum_probs=114.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ ++|+|||+||.... ...+..++++|+.|+.++++++...
T Consensus 54 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (246)
T 2uvd_A 54 SDAIAVRADVANAE------DVTNMVKQTVDVFGQVDILVNNAGVTKDNLLMRMKEEEWDTVINTNLKGVFLCTKAVSRF 127 (246)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57889999999653 4555554 68999999997542 1235568899999988887776531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+.+.... ....|+.||+..+.+...+
T Consensus 128 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 168 (246)
T 2uvd_A 128 MMRQRHGRIVNIASVVGVTGNP---------------------------------------GQANYVAAKAGVIGLTKTS 168 (246)
T ss_dssp HHHHTCEEEEEECCTHHHHCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECCHHhcCCCC---------------------------------------CCchHHHHHHHHHHHHHHH
Confidence 3568999999987643210 1246999999998887665
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++.... +. ......+.. . .+ ...+++++|+|++++.++....
T Consensus 169 a~e~~~~gi~v~~v~Pg~v~t~~~~~-------~~--~~~~~~~~~-~---~p-----~~~~~~~~dvA~~~~~l~s~~~ 230 (246)
T 2uvd_A 169 AKELASRNITVNAIAPGFIATDMTDV-------LD--ENIKAEMLK-L---IP-----AAQFGEAQDIANAVTFFASDQS 230 (246)
T ss_dssp HHHHGGGTEEEEEEEECSBGGGCSSC-------CC--TTHHHHHHH-T---CT-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhhhcCeEEEEEEeccccCcchhh-------cC--HHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHcCchh
Confidence 4 68999999999997764211 11 111111111 1 11 1247899999999999885432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 231 ~~----------------~tG~~~~vdgG 243 (246)
T 2uvd_A 231 KY----------------ITGQTLNVDGG 243 (246)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------CCCCEEEECcC
Confidence 21 35889999887
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=99.23 E-value=9.2e-11 Score=118.53 Aligned_cols=175 Identities=12% Similarity=0.063 Sum_probs=116.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+..++++|+.|+.++++++...
T Consensus 75 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 148 (277)
T 3gvc_A 75 CGAAACRVDVSDEQ------QIIAMVDACVAAFGGVDKLVANAGVVHLASLIDTTVEDFDRVIAINLRGAWLCTKHAAPR 148 (277)
T ss_dssp SSCEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcceEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999654 3555544 68999999998642 1335568899999999999998641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||++.+.... ....|+.||++.+.+++.+
T Consensus 149 m~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 189 (277)
T 3gvc_A 149 MIERGGGAIVNLSSLAGQVAVG---------------------------------------GTGAYGMSKAGIIQLSRIT 189 (277)
T ss_dssp HHHTTCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEcchhhccCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 3457899999987653210 1246999999999998865
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|+++...... .... ..+......... ..+ ...+..++|+|++++.++....
T Consensus 190 a~e~~~~gI~vn~v~PG~v~t~~~~~~~---~~~~--~~~~~~~~~~~~-~~~-----~~r~~~pedvA~~v~~L~s~~a 258 (277)
T 3gvc_A 190 AAELRSSGIRSNTLLPAFVDTPMQQTAM---AMFD--GALGAGGARSMI-ARL-----QGRMAAPEEMAGIVVFLLSDDA 258 (277)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHHHH---TCC--------CCHHHHH-HHH-----HSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhcccCeEEEEEeeCCccCchHHHhh---hcch--hhHHHHhhhhhh-hcc-----ccCCCCHHHHHHHHHHHcCCcc
Confidence 5 6899999999999875321100 0000 000000000000 001 1246789999999999886543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.+|
T Consensus 259 ~~----------------itG~~i~vdGG 271 (277)
T 3gvc_A 259 SM----------------ITGTTQIADGG 271 (277)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------ccCcEEEECCc
Confidence 21 36899999888
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.23 E-value=1.9e-10 Score=114.65 Aligned_cols=177 Identities=12% Similarity=0.011 Sum_probs=114.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ ++|+|||+||.... ...+..++.+|+.|+.++++++...
T Consensus 51 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 124 (256)
T 1geg_A 51 GHAVAVKVDVSDRD------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA 124 (256)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 56889999999653 4666655 79999999997532 1234568899999999999888652
Q ss_pred ---CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+ ..+||++||...+.... ....|+.||+..+.+++.
T Consensus 125 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~ 165 (256)
T 1geg_A 125 FKKEGHGGKIINACSQAGHVGNP---------------------------------------ELAVYSSSKFAVRGLTQT 165 (256)
T ss_dssp HHHHTSCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEECchhhcCCCC---------------------------------------CchhHHHHHHHHHHHHHH
Confidence 13 57999999987543210 124699999999999877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccc-cCCCC-CCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVG-WSNNL-YGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G-~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
++ .|+++++++||.|.++....... +.... .........+.. ......++..+|+|++++.++.
T Consensus 166 la~e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~p~~r~~~p~dvA~~v~~l~s 236 (256)
T 1geg_A 166 AARDLAPLGITVNGYCPGIVKTPMWAEIDRQVSEAAGKPLGYGTAEFAK---------RITLGRLSEPEDVAACVSYLAS 236 (256)
T ss_dssp HHHHHGGGTEEEEEEEECSBSSHHHHHHHHHHHHHHTCCTTHHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHS
T ss_pred HHHHHHHcCeEEEEEEECCCccchhhhhhhhccccccCChHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhC
Confidence 65 58999999999997752100000 00000 000000000100 0111247899999999999885
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|++|++.+|
T Consensus 237 ~~~~~----------------~tG~~i~vdGG 252 (256)
T 1geg_A 237 PDSDY----------------MTGQSLLIDGG 252 (256)
T ss_dssp GGGTT----------------CCSCEEEESSS
T ss_pred ccccC----------------CCCCEEEeCCC
Confidence 43321 36889999887
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=99.23 E-value=5e-10 Score=113.31 Aligned_cols=180 Identities=9% Similarity=-0.013 Sum_probs=117.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|+|||+||...+ ...+...+++|+.|+.+|++++...
T Consensus 79 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 152 (283)
T 1g0o_A 79 SDAACVKANVGVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 152 (283)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCeEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57899999999653 344443 368999999997643 2345668999999999999999863
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+..+||++||++.+.... . ....|+.||+..+.+++.++
T Consensus 153 ~~~~g~iv~isS~~~~~~~~------------------------------------~--~~~~Y~asK~a~~~~~~~la~ 194 (283)
T 1g0o_A 153 LEIGGRLILMGSITGQAKAV------------------------------------P--KHAVYSGSKGAIETFARCMAI 194 (283)
T ss_dssp SCTTCEEEEECCGGGTCSSC------------------------------------S--SCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEechhhccCCC------------------------------------C--CCcchHHHHHHHHHHHHHHHH
Confidence 3457999999987643210 0 12469999999999988765
Q ss_pred ----cCCCEEEecCCccccCCCCCc-cccCCCC-CCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPI-VGWSNNL-YGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~-~G~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
.|+++++++||.|.++..... ..+.... .........+.... ..+ ...+...+|+|++++.++....
T Consensus 195 e~~~~gi~v~~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p-----~~r~~~p~dvA~~v~~l~s~~~ 267 (283)
T 1g0o_A 195 DMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ--WSP-----LRRVGLPIDIARVVCFLASNDG 267 (283)
T ss_dssp HHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH--SCT-----TCSCBCHHHHHHHHHHHHSGGG
T ss_pred HhcccCeEEEEEecCcccchhhhhhhhhccccccccCHHHHHHHHhhc--CCC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 589999999999987532110 0000000 00111111111100 011 1247889999999999886533
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.+|
T Consensus 268 ~~----------------itG~~i~vdgG 280 (283)
T 1g0o_A 268 GW----------------VTGKVIGIDGG 280 (283)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------cCCCEEEeCCC
Confidence 21 36889999877
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.7e-10 Score=115.09 Aligned_cols=167 Identities=11% Similarity=0.114 Sum_probs=114.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~a 339 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++
T Consensus 52 ~~~~~~~~D~~~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 125 (257)
T 3tl3_A 52 DRARFAAADVTDEA------AVASALDLAETMGTLRIVVNCAGTGNAIRVLSRDGVFSLAAFRKIVDINLVGSFNVLRLA 125 (257)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHSCEEEEEECGGGSHHHHHHHHTCCCSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHhCCCCEEEECCCCCCCcccccccccCCHHHHHHHHHHccHHHHHHHHHH
Confidence 67999999999654 3555554 79999999997532 1235668899999999999998
Q ss_pred Hhc-----------CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHH
Q psy5825 340 TRC-----------SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFT 408 (596)
Q Consensus 340 ~~~-----------~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~S 408 (596)
... .+..+||++||.+.+.... ....|+.|
T Consensus 126 ~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~as 166 (257)
T 3tl3_A 126 AERIAKTEPVGPNAEERGVIINTASVAAFDGQI---------------------------------------GQAAYSAS 166 (257)
T ss_dssp HHHHTTSCCC--CCCCSEEEEEECCCC--CCHH---------------------------------------HHHHHHHH
T ss_pred HHHHHHhcccccccCCCcEEEEEcchhhcCCCC---------------------------------------CCccHHHH
Confidence 752 1245899999987654210 11359999
Q ss_pred HHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHH
Q psy5825 409 KAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVAT 483 (596)
Q Consensus 409 K~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva 483 (596)
|+..+.+++.++ .|+.+++++||.|..+.... .+......+.. .. + ....+..++|+|
T Consensus 167 Kaa~~~~~~~la~e~~~~gI~vn~v~PG~v~T~~~~~---------~~~~~~~~~~~-~~---~----~~~r~~~p~dva 229 (257)
T 3tl3_A 167 KGGVVGMTLPIARDLASHRIRVMTIAPGLFDTPLLAS---------LPEEARASLGK-QV---P----HPSRLGNPDEYG 229 (257)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCTTC------------CHHHHHHHHH-TS---S----SSCSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHhcccCcEEEEEEecCccChhhhh---------ccHHHHHHHHh-cC---C----CCCCccCHHHHH
Confidence 999988887665 68999999999997653211 11122211111 11 1 113478899999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 484 NMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 484 ~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++++.++.... ..|+++++.+|
T Consensus 230 ~~v~~l~s~~~------------------itG~~i~vdGG 251 (257)
T 3tl3_A 230 ALAVHIIENPM------------------LNGEVIRLDGA 251 (257)
T ss_dssp HHHHHHHHCTT------------------CCSCEEEESTT
T ss_pred HHHHHHhcCCC------------------CCCCEEEECCC
Confidence 99999986421 36899999888
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=99.23 E-value=1.5e-10 Score=117.99 Aligned_cols=169 Identities=12% Similarity=0.032 Sum_probs=115.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+||+++. .+..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 91 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 164 (293)
T 3rih_A 91 GNVIGVRLDVSDPG------SCADAARTVVDAFGALDVVCANAGIFPEARLDTMTPEQLSEVLDVNVKGTVYTVQACLAP 164 (293)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHTHHH
T ss_pred CcEEEEEEeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 47899999999653 3555443 67999999997542 124566899999999999999842
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||++.+... ++ ....|+.||+..+.+++.+
T Consensus 165 m~~~~~g~iV~isS~~~~~~~-------~~-------------------------------~~~~Y~asKaa~~~l~~~l 206 (293)
T 3rih_A 165 LTASGRGRVILTSSITGPVTG-------YP-------------------------------GWSHYGASKAAQLGFMRTA 206 (293)
T ss_dssp HHHHSSCEEEEECCSBTTTBB-------CT-------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEEeChhhccCC-------CC-------------------------------CCHHHHHHHHHHHHHHHHH
Confidence 1356799999998753110 00 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|+++... . ....++..+... ++ ..-+...+|+|++++.++....
T Consensus 207 a~e~~~~gI~vn~v~PG~v~t~~~~------~---~~~~~~~~~~~~----~p-----~~r~~~p~dvA~~v~fL~s~~a 268 (293)
T 3rih_A 207 AIELAPRGVTVNAILPGNILTEGLV------D---MGEEYISGMARS----IP-----MGMLGSPVDIGHLAAFLATDEA 268 (293)
T ss_dssp HHHHGGGTCEEEEEEECSBCCHHHH------H---TCHHHHHHHHTT----ST-----TSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHHhhhCeEEEEEecCCCcCcchh------h---ccHHHHHHHHhc----CC-----CCCCCCHHHHHHHHHHHhCccc
Confidence 5 6899999999999885321 0 011222222221 11 1235678999999998886433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 269 ~~----------------itG~~i~vdGG 281 (293)
T 3rih_A 269 GY----------------ITGQAIVVDGG 281 (293)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------CCCCEEEECCC
Confidence 21 36899999888
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=99.23 E-value=5.2e-11 Score=119.45 Aligned_cols=209 Identities=9% Similarity=0.016 Sum_probs=127.8
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEE
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIH 310 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH 310 (596)
.+||.+.++.-+..-...++..+ ++-.-+. +.. ..++.++.+|++++. .+..+++ ++|+|||
T Consensus 10 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~--~~~-~~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 10 VVIVTGASMGIGRAIAERFVDEGSKVIDLSIH--DPG-EAKYDHIECDVTNPD------QVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTCEEEEEESS--CCC-SCSSEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEecC--ccc-CCceEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEE
Confidence 35666665555555444444421 1100000 000 146888999998653 3555554 6899999
Q ss_pred cCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHH
Q psy5825 311 AAASLRFD-------ELIQDAFTLNIQATRELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHV 380 (596)
Q Consensus 311 ~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~ 380 (596)
+||..... ..+..++++|+.|+.+|++++... .+..+||++||.+++....
T Consensus 81 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------------- 141 (264)
T 2dtx_A 81 NAGIESYGKIESMSMGEWRRIIDVNLFGYYYASKFAIPYMIRSRDPSIVNISSVQASIITK------------------- 141 (264)
T ss_dssp CCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGTSCCT-------------------
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECCchhccCCC-------------------
Confidence 99975421 245668999999999999998652 3457999999988764210
Q ss_pred HhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----cCCCEEEecCCccccCCCCCccccCCCCCCcH----
Q psy5825 381 MQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPG---- 452 (596)
Q Consensus 381 ~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~---- 452 (596)
....|+.||+..+.+++.++ ..+.+++++||.|.++.......+. .....
T Consensus 142 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~i~vn~v~PG~v~t~~~~~~~~~~--~~~~~~~~~ 199 (264)
T 2dtx_A 142 --------------------NASAYVTSKHAVIGLTKSIALDYAPLLRCNAVCPATIDTPLVRKAAELE--VGSDPMRIE 199 (264)
T ss_dssp --------------------TBHHHHHHHHHHHHHHHHHHHHHTTTSEEEEEEECSBCSHHHHHHHHHH--HCSCHHHHH
T ss_pred --------------------CchhHHHHHHHHHHHHHHHHHHhcCCcEEEEEEeCCCcCcchhhhhhcc--cccCchhhH
Confidence 12469999999999998766 2289999999999664210000000 00000
Q ss_pred HHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 453 GAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 453 ~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..+..+..+ . ....+++++|+|++++.++...... ..|++|++.++
T Consensus 200 ~~~~~~~~~----~-----p~~~~~~p~dvA~~v~~l~s~~~~~----------------~tG~~i~vdGG 245 (264)
T 2dtx_A 200 KKISEWGHE----H-----PMQRIGKPQEVASAVAFLASREASF----------------ITGTCLYVDGG 245 (264)
T ss_dssp HHHHHHHHH----S-----TTSSCBCHHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred HHHHHHHhc----C-----CCCCCcCHHHHHHHHHHHhCchhcC----------------CCCcEEEECCC
Confidence 111111110 1 1235889999999999988643321 35889999887
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=99.22 E-value=9e-11 Score=116.59 Aligned_cols=175 Identities=14% Similarity=0.076 Sum_probs=108.0
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh---
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR--- 341 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~--- 341 (596)
+.++.+|++++ +++..+++ ++|+|||+||..... ..+...+.+|+.|+.++++++..
T Consensus 48 ~~~~~~D~~d~------~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~m~ 121 (250)
T 2fwm_X 48 FATEVMDVADA------AQVAQVCQRLLAETERLDALVNAAGILRMGATDQLSKEDWQQTFAVNVGGAFNLFQQTMNQFR 121 (250)
T ss_dssp SEEEECCTTCH------HHHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ceEEEcCCCCH------HHHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH
Confidence 67888999864 34666654 689999999975421 34567899999999999999842
Q ss_pred cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 342 CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 342 ~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
..+..+||++||.+++.... ....|+.||+..+.+++.++
T Consensus 122 ~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~ 162 (250)
T 2fwm_X 122 RQRGGAIVTVASDAAHTPRI---------------------------------------GMSAYGASKAALKSLALSVGL 162 (250)
T ss_dssp HHTCCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEECchhhCCCCC---------------------------------------CCchHHHHHHHHHHHHHHHHH
Confidence 12467999999988754210 22469999999999998765
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHH-HHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGG-AAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~-l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+++++++||.|+++...... .. ..... .+...........| ...++..+|+|++++.++.....
T Consensus 163 e~~~~gi~v~~v~Pg~v~t~~~~~~~--~~--~~~~~~~~~~~~~~~~~~~p-----~~~~~~p~dvA~~v~~l~s~~~~ 233 (250)
T 2fwm_X 163 ELAGSGVRCNVVSPGSTDTDMQRTLW--VS--DDAEEQRIRGFGEQFKLGIP-----LGKIARPQEIANTILFLASDLAS 233 (250)
T ss_dssp HHGGGTCEEEEEEECCC---------------------------------------------CHHHHHHHHHHHHSGGGT
T ss_pred HhCccCCEEEEEECCcccCccccccc--cC--hhHHHHHHhhhhhcccccCC-----CCCCcCHHHHHHHHHHHhCcccc
Confidence 5899999999999886432110 00 00000 00000000000011 12378899999999998865332
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|++|++.+|
T Consensus 234 ~----------------~tG~~i~vdGG 245 (250)
T 2fwm_X 234 H----------------ITLQDIVVDGG 245 (250)
T ss_dssp T----------------CCSCEEEESTT
T ss_pred C----------------CCCCEEEECCC
Confidence 1 36889999887
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=1.6e-10 Score=116.72 Aligned_cols=173 Identities=16% Similarity=0.149 Sum_probs=116.0
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-----------hhHHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-----------ELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-----------~~~~~~~~~NV~GT~~LL~~a 339 (596)
++.++.+|++++. .+..+++ .+|+|||+||..... ..+...+.+|+.|+.++++++
T Consensus 59 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 132 (280)
T 1xkq_A 59 QVNSVVADVTTED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKKV 132 (280)
T ss_dssp GEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred ceEEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHH
Confidence 7899999999653 3555544 689999999975321 235568899999999999998
Q ss_pred Hhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 340 TRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 340 ~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
... .+ .+||++||..++.... . ....|+.||+..+.++
T Consensus 133 ~~~~~~~~-g~iv~isS~~~~~~~~-------------------------------------~-~~~~Y~asK~a~~~~~ 173 (280)
T 1xkq_A 133 KPHLVASK-GEIVNVSSIVAGPQAQ-------------------------------------P-DFLYYAIAKAALDQYT 173 (280)
T ss_dssp HHHHHHHT-CEEEEECCGGGSSSCC-------------------------------------C-SSHHHHHHHHHHHHHH
T ss_pred HHHhhcCC-CcEEEecCccccCCCC-------------------------------------C-cccHHHHHHHHHHHHH
Confidence 751 13 7999999987754210 0 1246999999999998
Q ss_pred HHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHH---HHHHHhccceEeecCCCCccccccHHHHHHHHHH
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGA---AAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLG 488 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l---~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~ 488 (596)
+.++ .|+++++++||.|.++.... ...+... ............ ....++.++|+|++++.
T Consensus 174 ~~la~e~~~~gi~v~~v~PG~v~t~~~~~-------~~~~~~~~~~~~~~~~~~~~~~-----p~~~~~~pedvA~~v~~ 241 (280)
T 1xkq_A 174 RSTAIDLAKFGIRVNSVSPGMVETGFTNA-------MGMPDQASQKFYNFMASHKECI-----PIGAAGKPEHIANIILF 241 (280)
T ss_dssp HHHHHHHHTTTCEEEEEEECCBCSSHHHH-------TTCCHHHHHHHHHHHHHCTTTC-----TTSSCBCHHHHHHHHHH
T ss_pred HHHHHHhccCCeEEEEEeeCcCcCCcccc-------cccccccccchHHHHHHHHcCC-----CCCCCCCHHHHHHHHHH
Confidence 7765 68999999999998763210 0000000 001111111111 12357899999999999
Q ss_pred HHHhh-hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 489 VVWKT-ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 489 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++... ... ..|++|++.+|
T Consensus 242 l~s~~~~~~----------------~tG~~i~vdgG 261 (280)
T 1xkq_A 242 LADRNLSFY----------------ILGQSIVADGG 261 (280)
T ss_dssp HHCHHHHTT----------------CCSCEEEESTT
T ss_pred hcCcccccC----------------ccCCeEEECCC
Confidence 88543 221 35889999887
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.22 E-value=2.1e-10 Score=114.97 Aligned_cols=176 Identities=10% Similarity=0.015 Sum_probs=114.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 64 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 137 (267)
T 1iy8_A 64 AEVLTTVADVSDEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLK 137 (267)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 57899999999653 4555554 68999999997543 123556889999999887776643
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||...+.... ....|+.||+..+.+++.
T Consensus 138 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~ 178 (267)
T 1iy8_A 138 IMREQGSGMVVNTASVGGIRGIG---------------------------------------NQSGYAAAKHGVVGLTRN 178 (267)
T ss_dssp HHHHHTCCEEEEECCGGGTSBCS---------------------------------------SBHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCCEEEEEcchhhccCCC---------------------------------------CCccHHHHHHHHHHHHHH
Confidence 1 2567999999987653210 124699999999998877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.+++++||.|.++...... ..........++..+.. . .+ ...+..++|+|++++.++...
T Consensus 179 la~e~~~~gi~v~~v~PG~v~t~~~~~~~-~~~~~~~~~~~~~~~~~-~---~p-----~~r~~~~~dvA~~v~~l~s~~ 248 (267)
T 1iy8_A 179 SAVEYGRYGIRINAIAPGAIWTPMVENSM-KQLDPENPRKAAEEFIQ-V---NP-----SKRYGEAPEIAAVVAFLLSDD 248 (267)
T ss_dssp HHHHHGGGTCEEEEEEECSBCSHHHHHHH-HHHCTTCHHHHHHHHHT-T---CT-----TCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHHhcCeEEEEEEeCCCcCcchhccc-cccChhhhhhHHHHHhc-c---CC-----CCCCcCHHHHHHHHHHHcCcc
Confidence 65 5899999999999775321000 00000000000001111 0 11 124789999999999887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.+|
T Consensus 249 ~~~----------------~tG~~i~vdGG 262 (267)
T 1iy8_A 249 ASY----------------VNATVVPIDGG 262 (267)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred ccC----------------CCCCEEEECCC
Confidence 221 36889999887
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=99.22 E-value=5.4e-10 Score=113.16 Aligned_cols=179 Identities=12% Similarity=0.054 Sum_probs=118.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++ .+|+|||+||..... ..+...+++|+.|+.++++++..
T Consensus 76 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 149 (286)
T 3uve_A 76 RRIVTAEVDVRDYD------ALKAAVDSGVEQLGRLDIIVANAGIGNGGDTLDKTSEEDWTEMIDINLAGVWKTVKAGVP 149 (286)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 57999999999654 3555544 689999999975422 23456889999999999998864
Q ss_pred c----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 342 C----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 342 ~----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
. ....+||++||+..+.... ....|+.||+..+.+++
T Consensus 150 ~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~ 190 (286)
T 3uve_A 150 HMIAGGRGGSIILTSSVGGLKAYP---------------------------------------HTGHYVAAKHGVVGLMR 190 (286)
T ss_dssp HHHHHTSCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCcEEEEECchhhccCCC---------------------------------------CccHHHHHHHHHHHHHH
Confidence 2 2246899999988754211 22469999999999887
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccc---cCCCCCCc-HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHH
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVG---WSNNLYGP-GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLG 488 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G---~~~~~~~~-~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~ 488 (596)
.++ .|+.++++.||.|..+....... +......+ ..-+..... ....+| ..+...+|+|++++.
T Consensus 191 ~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p------~r~~~p~dvA~~v~f 263 (286)
T 3uve_A 191 AFGVELGQHMIRVNSVHPTHVKTPMLHNEGTFKMFRPDLENPGPDDMAPICQ-MFHTLP------IPWVEPIDISNAVLF 263 (286)
T ss_dssp HHHHHHGGGTEEEEEEEESSBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH-TTCSSS------CSCBCHHHHHHHHHH
T ss_pred HHHHHhcccCeEEEEEecCcccCCcccccchhhhccccccccchhhHHHHHH-hhhccC------CCcCCHHHHHHHHHH
Confidence 765 68999999999998764321000 00000000 000111100 011111 457899999999999
Q ss_pred HHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 489 VVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++...... ..|+++++.+|
T Consensus 264 L~s~~a~~----------------itG~~i~vdGG 282 (286)
T 3uve_A 264 FASDEARY----------------ITGVTLPIDAG 282 (286)
T ss_dssp HHSGGGTT----------------CCSCEEEESTT
T ss_pred HcCccccC----------------CcCCEEeECCc
Confidence 88543321 36899999887
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.22 E-value=3.5e-10 Score=115.53 Aligned_cols=179 Identities=14% Similarity=0.066 Sum_probs=118.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++ .+|+|||+||..... ..+...+++|+.|+.++++++..
T Consensus 89 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 162 (299)
T 3t7c_A 89 RRIIASQVDVRDFD------AMQAAVDDGVTQLGRLDIVLANAALASEGTRLNRMDPKTWRDMIDVNLNGAWITARVAIP 162 (299)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 67999999999654 3555543 689999999975422 23456899999999999998864
Q ss_pred c----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 342 C----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 342 ~----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
. .+..+||++||++.+.... ....|+.||++.+.+++
T Consensus 163 ~~~~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~ 203 (299)
T 3t7c_A 163 HIMAGKRGGSIVFTSSIGGLRGAE---------------------------------------NIGNYIASKHGLHGLMR 203 (299)
T ss_dssp HHHHTTSCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCcEEEEECChhhccCCC---------------------------------------CcchHHHHHHHHHHHHH
Confidence 2 2357999999987654210 12469999999999988
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccc---cCCCCCCc-HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHH
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVG---WSNNLYGP-GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLG 488 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G---~~~~~~~~-~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~ 488 (596)
.++ .|+.++++.||.|..+.....+. +......+ ...+..... ....++ ..+..++|+|++++.
T Consensus 204 ~la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p------~r~~~pedvA~~v~f 276 (299)
T 3t7c_A 204 TMALELGPRNIRVNIVCPSSVATPMLLNEPTYRMFRPDLENPTVEDFQVASR-QMHVLP------IPYVEPADISNAILF 276 (299)
T ss_dssp HHHHHHGGGTEEEEEEEESCBSSTTTSSHHHHHHHCTTSSSCCHHHHHHHHH-HHSSSS------CSCBCHHHHHHHHHH
T ss_pred HHHHHhcccCcEEEEEecCCccCccccccchhhhhhhhhccchhhHHHHHhh-hhcccC------cCCCCHHHHHHHHHH
Confidence 765 58999999999998764321100 00000000 010000000 000111 357889999999999
Q ss_pred HHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 489 VVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 489 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++...... ..|+++++.+|
T Consensus 277 L~s~~a~~----------------itG~~i~vdGG 295 (299)
T 3t7c_A 277 LVSDDARY----------------ITGVSLPVDGG 295 (299)
T ss_dssp HHSGGGTT----------------CCSCEEEESTT
T ss_pred HhCccccc----------------CcCCEEeeCCC
Confidence 98654321 36899999887
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=99.21 E-value=7e-11 Score=116.86 Aligned_cols=173 Identities=12% Similarity=0.089 Sum_probs=117.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-----cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc-C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-----HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC-S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-----~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~-~ 343 (596)
..+.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++... .
T Consensus 44 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~ 117 (244)
T 4e4y_A 44 ENLKFIKADLTKQQ------DITNVLDIIKNVSFDGIFLNAGILIKGSIFDIDIESIKKVLDLNVWSSIYFIKGLENNLK 117 (244)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHTTTCCEEEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHTGGGEE
T ss_pred ccceEEecCcCCHH------HHHHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHhc
Confidence 56889999999653 4666665 68999999997532 1235568899999999999998762 1
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
...+||++||...+.... ....|+.||+..+.+++.++
T Consensus 118 ~~g~iv~~sS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~la~e~ 158 (244)
T 4e4y_A 118 VGASIVFNGSDQCFIAKP---------------------------------------NSFAYTLSKGAIAQMTKSLALDL 158 (244)
T ss_dssp EEEEEEEECCGGGTCCCT---------------------------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred cCcEEEEECCHHHccCCC---------------------------------------CCchhHHHHHHHHHHHHHHHHHH
Confidence 114899999988754211 12469999999999998765
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHH--hcc----ceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAA--LGL----IHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~--~g~----~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|+.+++++||.|.++... .++.... .+. .............+..++|+|++++.++..
T Consensus 159 ~~~gi~v~~v~PG~v~T~~~~-------------~~~~~~~~~~~~~~~~~~~~~~~~~p~~r~~~p~dvA~~v~~l~s~ 225 (244)
T 4e4y_A 159 AKYQIRVNTVCPGTVDTDLYR-------------NLIQKYANNVGISFDEAQKQEEKEFPLNRIAQPQEIAELVIFLLSD 225 (244)
T ss_dssp GGGTCEEEEEEESCBCCHHHH-------------HHHHHHHHHHTCCHHHHHHHHHTTSTTSSCBCHHHHHHHHHHHHSG
T ss_pred HHcCeEEEEEecCccCchhhH-------------HHHHhhhhhcCCCHHHHHHHHhhcCCCCCCcCHHHHHHHHHHHhcC
Confidence 6899999999999764211 1110000 000 000001112234578899999999999865
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|++|++.+|
T Consensus 226 ~~~~----------------itG~~i~vdGG 240 (244)
T 4e4y_A 226 KSKF----------------MTGGLIPIDGG 240 (244)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred cccc----------------ccCCeEeECCC
Confidence 4321 36889999887
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=99.21 E-value=1.2e-10 Score=116.93 Aligned_cols=168 Identities=11% Similarity=0.096 Sum_probs=112.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+..++++|+.|+.++++++...
T Consensus 73 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 146 (266)
T 3grp_A 73 KDVFVFSANLSDRK------SIKQLAEVAEREMEGIDILVNNAGITRDGLFVRMQDQDWDDVLAVNLTAASTLTRELIHS 146 (266)
T ss_dssp SSEEEEECCTTSHH------HHHHHHHHHHHHHTSCCEEEECCCCC-----CCCHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEeecCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 67999999999654 3555554 78999999997642 1345668899999988777776431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||+..+.... ....|+.||++.+.+++.+
T Consensus 147 ~~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~l 187 (266)
T 3grp_A 147 MMRRRYGRIINITSIVGVVGNP---------------------------------------GQTNYCAAKAGLIGFSKAL 187 (266)
T ss_dssp HHHHTCEEEEEECCC----------------------------------------------CHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECCHHHcCCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 3557999999987643210 1146999999988888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++... .. .......+.. ......+..++|+|++++.++....
T Consensus 188 a~e~~~~gI~vn~v~PG~v~t~~~~-------~~--~~~~~~~~~~---------~~p~~r~~~~edvA~~v~~L~s~~~ 249 (266)
T 3grp_A 188 AQEIASRNITVNCIAPGFIKSAMTD-------KL--NEKQKEAIMA---------MIPMKRMGIGEEIAFATVYLASDEA 249 (266)
T ss_dssp HHHHGGGTEEEEEEEECSBCSHHHH-------TC--CHHHHHHHHT---------TCTTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhhhhCcEEEEEeeCcCCCchhh-------cc--CHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCccc
Confidence 5 6899999999999775321 00 1112111111 1122356789999999999886543
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.+|
T Consensus 250 ~~----------------itG~~i~vdGG 262 (266)
T 3grp_A 250 AY----------------LTGQTLHINGG 262 (266)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------ccCCEEEECCC
Confidence 21 36899999887
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.9e-10 Score=114.44 Aligned_cols=172 Identities=11% Similarity=0.057 Sum_probs=114.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+.+|+.|+.++++++...
T Consensus 52 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 125 (253)
T 1hxh_A 52 ERSMFVRHDVSSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA 125 (253)
T ss_dssp TTEEEECCCTTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhcHHHHHHHHHHHHH
Confidence 57899999999653 4555554 46999999997542 1345668899999988877766431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+ .+||++||.+++.... ....|+.||+..+.+++.+
T Consensus 126 ~~~~~-g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 165 (253)
T 1hxh_A 126 MKETG-GSIINMASVSSWLPIE---------------------------------------QYAGYSASKAAVSALTRAA 165 (253)
T ss_dssp HTTTC-EEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHHcC-CEEEEEcchhhcCCCC---------------------------------------CCccHHHHHHHHHHHHHHH
Confidence 34 8999999988764210 1246999999999998876
Q ss_pred h-----c--CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----Y--KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~--gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ . |++++++|||.|+++.... +... .... ..........+ ...++.++|+|++++.++..
T Consensus 166 a~e~~~~~~gi~v~~v~Pg~v~t~~~~~---~~~~--~~~~---~~~~~~~~~~p-----~~~~~~~~dvA~~~~~l~s~ 232 (253)
T 1hxh_A 166 ALSCRKQGYAIRVNSIHPDGIYTPMMQA---SLPK--GVSK---EMVLHDPKLNR-----AGRAYMPERIAQLVLFLASD 232 (253)
T ss_dssp HHHHHHHTCCEEEEEEEESEECCHHHHH---HSCT--TCCH---HHHBCBTTTBT-----TCCEECHHHHHHHHHHHHSG
T ss_pred HHHhhhcCCCeEEEEEEeCCccCchhhh---ccch--hhhH---HHHhhhhccCc-----cCCCCCHHHHHHHHHHHcCc
Confidence 5 3 8999999999998863210 0000 0000 00110000011 12478999999999998865
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|++|++.++
T Consensus 233 ~~~~----------------~tG~~~~vdgG 247 (253)
T 1hxh_A 233 ESSV----------------MSGSELHADNS 247 (253)
T ss_dssp GGTT----------------CCSCEEEESSS
T ss_pred cccC----------------CCCcEEEECCC
Confidence 3321 35889999887
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.21 E-value=2.6e-10 Score=117.51 Aligned_cols=179 Identities=12% Similarity=0.058 Sum_probs=117.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+||+++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.+|++++...
T Consensus 107 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 180 (317)
T 3oec_A 107 RRIIARQADVRDLA------SLQAVVDEALAEFGHIDILVSNVGISNQGEVVSLTDQQWSDILQTNLIGAWHACRAVLPS 180 (317)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57999999999653 4555554 68999999997642 1345668899999999999998541
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||+..+.... ....|+.||++.+.+++.
T Consensus 181 m~~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~ 221 (317)
T 3oec_A 181 MIERGQGGSVIFVSSTVGLRGAP---------------------------------------GQSHYAASKHGVQGLMLS 221 (317)
T ss_dssp HHHTCSCEEEEEECCGGGSSCCT---------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCCEEEEECcHHhcCCCC---------------------------------------CCcchHHHHHHHHHHHHH
Confidence 2246799999987654210 124699999999999887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCcc---ccCCCCCCc-HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIV---GWSNNLYGP-GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGV 489 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~---G~~~~~~~~-~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~ 489 (596)
++ .|+.+++++||.|.++...... .+...+..+ ......... .. ......|+.++|||++++.+
T Consensus 222 la~e~~~~gI~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~------~~~p~~~~~pedvA~av~fL 294 (317)
T 3oec_A 222 LANEVGRHNIRVNSVNPGAVNTEMALNEKLLKMFLPHLENPTREDAAELFS-QL------TLLPIPWVEPEDVSNAVAWL 294 (317)
T ss_dssp HHHHHGGGTEEEEEEEECSBSSHHHHCHHHHHHHCTTCSSCCHHHHHHHHT-TT------CSSSSSSBCHHHHHHHHHHH
T ss_pred HHHHHhhcCeEEEEEecCcccCccccchhhhhhhhhhccccchhHHHHHHh-hh------ccCCCCCCCHHHHHHHHHHH
Confidence 66 5899999999999875321000 000000000 000011110 00 11115688999999999988
Q ss_pred HHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 490 VWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 490 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
+...... ..|+++++.+|
T Consensus 295 ~s~~a~~----------------itG~~i~vdGG 312 (317)
T 3oec_A 295 ASDEARY----------------IHGAAIPVDGG 312 (317)
T ss_dssp TSGGGTT----------------CCSCEEEESTT
T ss_pred cCCcccC----------------CCCCEEEECcc
Confidence 7543321 36899999887
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=5.3e-11 Score=120.21 Aligned_cols=171 Identities=12% Similarity=0.063 Sum_probs=116.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+..++++|+.|+.++++++...
T Consensus 77 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 150 (277)
T 4fc7_A 77 RRCLPLSMDVRAPP------AVMAAVDQALKEFGRIDILINCAAGNFLCPAGALSFNAFKTVMDIDTSGTFNVSRVLYEK 150 (277)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57999999999653 3555544 68999999996432 1235568899999999999998531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.||+..+.+++.+
T Consensus 151 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 191 (277)
T 4fc7_A 151 FFRDHGGVIVNITATLGNRGQA---------------------------------------LQVHAGSAKAAVDAMTRHL 191 (277)
T ss_dssp THHHHCEEEEEECCSHHHHTCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEEEEECchhhCCCCC---------------------------------------CcHHHHHHHHHHHHHHHHH
Confidence 2346999999987653210 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++... ..+......+..+... . ....+..++|+|++++.++....
T Consensus 192 a~e~~~~gi~vn~v~PG~v~t~~~~------~~~~~~~~~~~~~~~~----~-----p~~r~~~p~dvA~~v~fL~s~~~ 256 (277)
T 4fc7_A 192 AVEWGPQNIRVNSLAPGPISGTEGL------RRLGGPQASLSTKVTA----S-----PLQRLGNKTEIAHSVLYLASPLA 256 (277)
T ss_dssp HHHHGGGTEEEEEEEECCBSSSHHH------HHHSCCHHHHHHHHHT----S-----TTSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhhhcCeEEEEEEECCEecchhh------hhccCCHHHHHHHhcc----C-----CCCCCcCHHHHHHHHHHHcCCcc
Confidence 5 5899999999999775210 0001111222222111 1 12246789999999999886433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.+|
T Consensus 257 ~~----------------itG~~i~vdGG 269 (277)
T 4fc7_A 257 SY----------------VTGAVLVADGG 269 (277)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------cCCCEEEECCC
Confidence 21 36899999888
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.21 E-value=1.6e-10 Score=116.31 Aligned_cols=179 Identities=12% Similarity=0.072 Sum_probs=116.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh--------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD--------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++ .+|+|||+||..... ..+...+++|+.|+.++++++..
T Consensus 54 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 127 (270)
T 1yde_A 54 PGAVFILCDVTQED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP 127 (270)
T ss_dssp TTEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cCCeEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 35889999999653 3555554 689999999975321 23566889999999999999864
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
. .+..+||++||...+.... ....|+.||+..+.+++.+
T Consensus 128 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~l 168 (270)
T 1yde_A 128 YLRKSQGNVINISSLVGAIGQA---------------------------------------QAVPYVATKGAVTAMTKAL 168 (270)
T ss_dssp HHHHHTCEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHHCCCEEEEEcCccccCCCC---------------------------------------CCcccHHHHHHHHHHHHHH
Confidence 1 1247999999986532100 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|+++..... ..........+..... . .| ...+...+|+|++++.++.. .
T Consensus 169 a~e~~~~gi~vn~v~Pg~v~t~~~~~~---~~~~~~~~~~~~~~~~-~---~p-----~~r~~~p~dva~~v~~L~s~-~ 235 (270)
T 1yde_A 169 ALDESPYGVRVNCISPGNIWTPLWEEL---AALMPDPRASIREGML-A---QP-----LGRMGQPAEVGAAAVFLASE-A 235 (270)
T ss_dssp HHHHGGGTCEEEEEEECSBCCHHHHHH---HTTSSSHHHHHHHHHH-T---ST-----TSSCBCHHHHHHHHHHHHHH-C
T ss_pred HHHhhhhCcEEEEEEeCccccchhhhh---hhcccchHHHHHHHhh-c---CC-----CCCCcCHHHHHHHHHHHccc-C
Confidence 5 689999999999988632100 0000011111111111 0 11 12367889999999988764 2
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHH
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWL 531 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~ 531 (596)
.. ..|+++++.+| ..+.+.
T Consensus 236 ~~----------------itG~~i~vdGG--~~~~~~ 254 (270)
T 1yde_A 236 NF----------------CTGIELLVTGG--AELGYG 254 (270)
T ss_dssp TT----------------CCSCEEEESTT--TTSCC-
T ss_pred CC----------------cCCCEEEECCC--eecccC
Confidence 21 36889999988 545443
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=99.21 E-value=7.3e-11 Score=117.37 Aligned_cols=185 Identities=9% Similarity=-0.024 Sum_probs=105.1
Q ss_pred HHHHHhc----cccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhc---CCCceEEEecCcccccCCccccccccC
Q psy5825 297 DQQFIQH----HIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYP 369 (596)
Q Consensus 297 ~~~~l~~----~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~ 369 (596)
.+..+++ .+|+|||+||......++...+.+|+.|+.+|+++|... .+..+||++||.+++..... +
T Consensus 51 ~v~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~~------~ 124 (257)
T 1fjh_A 51 AIADVLAKCSKGMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFD------K 124 (257)
T ss_dssp HHHHHHTTCTTCCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGG------G
T ss_pred HHHHHHHHhCCCCCEEEECCCCCCCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhhccccc------c
Confidence 4566664 459999999987644567889999999999999998631 35579999999988742110 0
Q ss_pred CCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCcccc
Q psy5825 370 PLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGW 444 (596)
Q Consensus 370 ~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~ 444 (596)
+ ........ .+...................|+.||++.+.+++.++ .|+.+++++||.|.++.....
T Consensus 125 -~-~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~--- 196 (257)
T 1fjh_A 125 -N-PLALALEA---GEEAKARAIVEHAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQAG--- 196 (257)
T ss_dssp -C-TTHHHHHH---TCHHHHHHHHHTCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC------------
T ss_pred -c-hhhhhhcc---cchhhhhhhhhcccCCCCccHHHHHHHHHHHHHHHHHHHHhhcCeEEEEEeeCCCCCccchhh---
Confidence 0 00011000 0000010000000000012469999999999997765 689999999999977632110
Q ss_pred CCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 445 SNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 445 ~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ...+...+.. .+ ......+++++|+|++++.++...... ..|++|++.++
T Consensus 197 ----~-~~~~~~~~~~----~~---~~~~~~~~~~~dvA~~~~~l~~~~~~~----------------~tG~~~~vdgG 247 (257)
T 1fjh_A 197 ----L-QDPRYGESIA----KF---VPPMGRRAEPSEMASVIAFLMSPAASY----------------VHGAQIVIDGG 247 (257)
T ss_dssp ---------------------C---CCSTTSCCCTHHHHHHHHHHTSGGGTT----------------CCSCEEEESTT
T ss_pred ----c-cchhHHHHHH----hc---ccccCCCCCHHHHHHHHHHHhCchhcC----------------CcCCEEEECCC
Confidence 0 0000000000 00 011124789999999999988653221 35889999887
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=99.20 E-value=4.6e-10 Score=115.75 Aligned_cols=163 Identities=12% Similarity=0.065 Sum_probs=99.3
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRCS 343 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~~ 343 (596)
++.++.+||+++. .+..+++ .+|+|||+||...+ ...+..++.+|+.|+.+|++++...-
T Consensus 60 ~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~ 133 (319)
T 3ioy_A 60 EVMGVQLDVASRE------GFKMAADEVEARFGPVSILCNNAGVNLFQPIEESSYDDWDWLLGVNLHGVVNGVTTFVPRM 133 (319)
T ss_dssp GEEEEECCTTCHH------HHHHHHHHHHHHTCCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred eEEEEECCCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 7999999999653 4555554 57999999997532 13355689999999999999987521
Q ss_pred ---------CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHH----
Q psy5825 344 ---------QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKA---- 410 (596)
Q Consensus 344 ---------~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~---- 410 (596)
+..+||++||++.+.... ....|+.||+
T Consensus 134 ~~~~~~~~~~~g~iV~isS~a~~~~~~---------------------------------------~~~~Y~aSKaal~~ 174 (319)
T 3ioy_A 134 VERVKAGEQKGGHVVNTASMAAFLAAG---------------------------------------SPGIYNTTKFAVRG 174 (319)
T ss_dssp HHHHHTTSCCCCEEEEECCGGGTCCCS---------------------------------------SSHHHHHHHHHHHH
T ss_pred HHhhhccCCCCcEEEEecccccccCCC---------------------------------------CCHHHHHHHHHHHH
Confidence 245799999988765311 2246999999
Q ss_pred HHHHHHHHHh-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecC-CCCccccccHHHHHHHHHH
Q psy5825 411 IGESVVEKYL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAK-HDKKCDLIPVDVATNMMLG 488 (596)
Q Consensus 411 ~aE~lv~~~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~-~~~~~d~ipVDdva~aii~ 488 (596)
+++.+.+++. .|+.+++++||.|.++...... . ....+.............. .......+++++||++++.
T Consensus 175 ~~~~la~e~~~~gi~v~~v~PG~v~T~~~~~~~------~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~pe~vA~~~~~ 247 (319)
T 3ioy_A 175 LSESLHYSLLKYEIGVSVLCPGLVKSYIYASDD------I-RPDALKGEVKPVDKTAVERLAGVHEFGMEPDVIGARVIE 247 (319)
T ss_dssp HHHHHHHHHGGGTCEEEEECCCCBC------------------------------------CCGGGSSBCHHHHHHHHHH
T ss_pred HHHHHHHHhhhcCCEEEEEEcCeEccCcccccc------c-CchhhcccccchhHHHHHHHHHhhhcCCCHHHHHHHHHH
Confidence 5555555555 7999999999999776432110 0 0000000000000000001 1111223899999999999
Q ss_pred HHHh
Q psy5825 489 VVWK 492 (596)
Q Consensus 489 ~~~~ 492 (596)
++..
T Consensus 248 al~~ 251 (319)
T 3ioy_A 248 AMKA 251 (319)
T ss_dssp HHHT
T ss_pred HHHc
Confidence 9864
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.20 E-value=4.1e-10 Score=114.13 Aligned_cols=177 Identities=12% Similarity=0.063 Sum_probs=116.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 77 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 150 (283)
T 3v8b_A 77 GQAIALEADVSDEL------QMRNAVRDLVLKFGHLDIVVANAGINGVWAPIDDLKPFEWDETIAVNLRGTFLTLHLTVP 150 (283)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57899999999653 3555544 68999999997532 123456899999999999999842
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||++.+.... . . ....|+.||++.+.+++.
T Consensus 151 ~m~~~~~g~Iv~isS~~~~~~~~--------~----------------------------~-~~~~Y~asKaa~~~l~~~ 193 (283)
T 3v8b_A 151 YLKQRGGGAIVVVSSINGTRTFT--------T----------------------------P-GATAYTATKAAQVAIVQQ 193 (283)
T ss_dssp HHHHHTCEEEEEECCSBTTTBCC--------S----------------------------T-TCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCceEEEEcChhhccCCC--------C----------------------------C-CchHHHHHHHHHHHHHHH
Confidence 1 3567999999987653100 0 0 124699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCc--cccccHHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK--CDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~--~d~ipVDdva~aii~~~~ 491 (596)
++ .|+.+++++||.|..+..... .... .. ........+...... ..+...+|+|++++.++.
T Consensus 194 la~e~~~~gI~vn~v~PG~v~T~~~~~~------~~~~-~~----~~~~~~~~~~~~~p~~~~r~~~pedvA~~v~fL~s 262 (283)
T 3v8b_A 194 LALELGKHHIRVNAVCPGAIETNISDNT------KLRH-EE----ETAIPVEWPKGQVPITDGQPGRSEDVAELIRFLVS 262 (283)
T ss_dssp HHHHTTTTTEEEEEEEECSBSSCTTCCT------TBCC-HH----HHSCCCBCTTCSCGGGTTCCBCHHHHHHHHHHHTS
T ss_pred HHHHhCccCcEEEEEEeCCCcCCccccc------cccc-ch----hhhhhhhhhhhcCccccCCCCCHHHHHHHHHHHcC
Confidence 76 579999999999977643211 0000 10 000000001101111 245678999999998875
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|+++++.+|
T Consensus 263 ~~a~~----------------itG~~i~vdGG 278 (283)
T 3v8b_A 263 ERARH----------------VTGSPVWIDGG 278 (283)
T ss_dssp GGGTT----------------CCSCEEEESTT
T ss_pred ccccC----------------CcCCEEEECcC
Confidence 43321 36899999887
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.8e-10 Score=116.34 Aligned_cols=169 Identities=9% Similarity=0.058 Sum_probs=114.1
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 78 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 151 (276)
T 2b4q_A 78 DCQAIPADLSSEA------GARRLAQALGELSARLDILVNNAGTSWGAALESYPVSGWEKVMQLNVTSVFSCIQQLLPLL 151 (276)
T ss_dssp CEEECCCCTTSHH------HHHHHHHHHHHHCSCCSEEEECCCCCCCCCTTSCCSHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ceEEEEeeCCCHH------HHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6889999999653 3555554 68999999997532 1345678999999999998887531
Q ss_pred --CCC----ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCc-hHHHHHHHHHHH
Q psy5825 343 --SQL----KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNN-SYSFTKAIGESV 415 (596)
Q Consensus 343 --~~v----krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~-~Y~~SK~~aE~l 415 (596)
.+. .+||++||++++.... ... .|+.||+..+.+
T Consensus 152 ~~~~~~~~~g~iV~isS~~~~~~~~---------------------------------------~~~~~Y~asK~a~~~~ 192 (276)
T 2b4q_A 152 RRSASAENPARVINIGSVAGISAMG---------------------------------------EQAYAYGPSKAALHQL 192 (276)
T ss_dssp HHHCCSSSCEEEEEECCGGGTCCCC---------------------------------------CSCTTHHHHHHHHHHH
T ss_pred HhccCCCCCCEEEEECCHHHcCCCC---------------------------------------CCccccHHHHHHHHHH
Confidence 123 7999999988764210 112 699999999999
Q ss_pred HHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 416 VEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 416 v~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
++.++ .|+++++++||.|..+... .+. ..+...+... ..++ ...++.++|+|++++.++
T Consensus 193 ~~~la~e~~~~gI~vn~v~PG~v~T~~~~---~~~------~~~~~~~~~~--~~~p-----~~r~~~p~dvA~~v~~l~ 256 (276)
T 2b4q_A 193 SRMLAKELVGEHINVNVIAPGRFPSRMTR---HIA------NDPQALEADS--ASIP-----MGRWGRPEEMAALAISLA 256 (276)
T ss_dssp HHHHHHHHGGGTEEEEEEEECCCCSTTTH---HHH------HCHHHHHHHH--HTST-----TSSCCCHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCeEEEEEEeccCcCcchh---hcc------hhHHHHHHhh--cCCC-----CCCcCCHHHHHHHHHHHh
Confidence 98765 5899999999999765321 000 0000111110 0011 124789999999999988
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|++|++.+|
T Consensus 257 s~~~~~----------------~tG~~i~vdGG 273 (276)
T 2b4q_A 257 GTAGAY----------------MTGNVIPIDGG 273 (276)
T ss_dssp SGGGTT----------------CCSCEEEESTT
T ss_pred CccccC----------------CCCCEEEeCCC
Confidence 653321 36889999877
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.20 E-value=1.3e-10 Score=116.96 Aligned_cols=170 Identities=8% Similarity=0.014 Sum_probs=116.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.+|++++...
T Consensus 75 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 148 (271)
T 4ibo_A 75 HDAEAVAFDVTSES------EIIEAFARLDEQGIDVDILVNNAGIQFRKPMIELETADWQRVIDTNLTSAFMIGREAAKR 148 (271)
T ss_dssp CCEEECCCCTTCHH------HHHHHHHHHHHHTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCchhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999653 4555554 68999999997532 1235568999999999998887652
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.||++.+.+++.+
T Consensus 149 ~~~~~~g~iV~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 189 (271)
T 4ibo_A 149 MIPRGYGKIVNIGSLTSELARA---------------------------------------TVAPYTVAKGGIKMLTRAM 189 (271)
T ss_dssp HHHHTCEEEEEECCGGGTSBCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEccHHhCCCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 2456999999987643210 2246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++..... .....+...+..+ .| ...+..++|+|++++.++....
T Consensus 190 a~e~~~~gI~vn~v~PG~v~T~~~~~~-------~~~~~~~~~~~~~----~p-----~~r~~~pedva~~v~~L~s~~~ 253 (271)
T 4ibo_A 190 AAEWAQYGIQANAIGPGYMLTDMNQAL-------IDNPEFDAWVKAR----TP-----AKRWGKPQELVGTAVFLSASAS 253 (271)
T ss_dssp HHHHGGGTEEEEEEEECSBCSGGGHHH-------HHCHHHHHHHHHH----ST-----TCSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHHhhhCeEEEEEEeccEeCcchhhc-------ccCHHHHHHHHhc----CC-----CCCCcCHHHHHHHHHHHhCccc
Confidence 5 689999999999977532100 0001111111111 11 1246778999999998876533
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 254 ~~----------------itG~~i~vdGG 266 (271)
T 4ibo_A 254 DY----------------VNGQIIYVDGG 266 (271)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------CCCcEEEECCC
Confidence 21 36899999988
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.20 E-value=3.3e-11 Score=120.87 Aligned_cols=180 Identities=11% Similarity=0.103 Sum_probs=115.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHH----hcC--
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLAT----RCS-- 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~----~~~-- 343 (596)
.++.++.+|++++. ++..+++ .+|+|||+||... ...+...+.+|+.|+.+++.++. ...
T Consensus 58 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~-~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~ 130 (267)
T 2gdz_A 58 QKTLFIQCDVADQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG 130 (267)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC
T ss_pred CceEEEecCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCC-hhhHHHHHhHHHHHHHHHHHHHHHHHHhccCC
Confidence 46889999999653 4555554 4799999999764 34567788999997766655543 211
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH----
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY---- 419 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~---- 419 (596)
...+||++||.+++.... ....|+.||+..+.+++.+
T Consensus 131 ~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~~ala~ 171 (267)
T 2gdz_A 131 EGGIIINMSSLAGLMPVA---------------------------------------QQPVYCASKHGIVGFTRSAALAA 171 (267)
T ss_dssp CCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCccccCCCC---------------------------------------CCchHHHHHHHHHHHHHHHHHHH
Confidence 157999999998765311 1245999999999988752
Q ss_pred --h-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 420 --L-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 420 --~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
. .|+++++++||.|.++.... +.. ........ .....+ ........+++++|+|++++.++....
T Consensus 172 e~~~~gi~v~~v~Pg~v~t~~~~~-------~~~-~~~~~~~~-~~~~~~-~~~~~~~~~~~~~dvA~~v~~l~s~~~-- 239 (267)
T 2gdz_A 172 NLMNSGVRLNAICPGFVNTAILES-------IEK-EENMGQYI-EYKDHI-KDMIKYYGILDPPLIANGLITLIEDDA-- 239 (267)
T ss_dssp HHHTCCEEEEEEEESCBSSHHHHG-------GGC-HHHHGGGG-GGHHHH-HHHHHHHCCBCHHHHHHHHHHHHHCTT--
T ss_pred HhccCCcEEEEEecCcCcchhhhc-------ccc-ccccchhh-hHHHHH-HHHhccccCCCHHHHHHHHHHHhcCcC--
Confidence 2 68999999999997653110 000 00000000 000000 000012347899999999999886432
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHH
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLE 532 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~e 532 (596)
..|++|++.++ ..+++.+
T Consensus 240 ----------------~~G~~~~v~gg--~~~~~~~ 257 (267)
T 2gdz_A 240 ----------------LNGAIMKITTS--KGIHFQD 257 (267)
T ss_dssp ----------------CSSCEEEEETT--TEEEECC
T ss_pred ----------------CCCcEEEecCC--CcccccC
Confidence 25889999988 6666554
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.19 E-value=3.3e-10 Score=113.72 Aligned_cols=170 Identities=11% Similarity=0.046 Sum_probs=114.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..+++ ++|+|||+||..... ..+..++.+|+.|+.++++++..
T Consensus 71 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 144 (267)
T 1vl8_A 71 VETMAFRCDVSNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 144 (267)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57889999999653 3555554 689999999975421 23456889999999999998853
Q ss_pred --cCCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||.++ +... + ....|+.||+..+.+++.
T Consensus 145 m~~~~~g~iv~isS~~~~~~~~--------~-------------------------------~~~~Y~asK~a~~~~~~~ 185 (267)
T 1vl8_A 145 LRESDNPSIINIGSLTVEEVTM--------P-------------------------------NISAYAASKGGVASLTKA 185 (267)
T ss_dssp HTTCSSCEEEEECCGGGTCCCS--------S-------------------------------SCHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECCcchhccCC--------C-------------------------------CChhHHHHHHHHHHHHHH
Confidence 135679999999873 2110 0 124699999999999887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.|.++... .+. ....+...+... .+ ...++..+|+|++++.++...
T Consensus 186 la~e~~~~gi~v~~v~PG~v~T~~~~---~~~----~~~~~~~~~~~~----~p-----~~~~~~p~dvA~~v~~l~s~~ 249 (267)
T 1vl8_A 186 LAKEWGRYGIRVNVIAPGWYRTKMTE---AVF----SDPEKLDYMLKR----IP-----LGRTGVPEDLKGVAVFLASEE 249 (267)
T ss_dssp HHHHHGGGTCEEEEEEECCBCSTTTH---HHH----TCHHHHHHHHHT----CT-----TSSCBCGGGGHHHHHHHHSGG
T ss_pred HHHHhcccCeEEEEEEeccCcccccc---ccc----cChHHHHHHHhh----CC-----CCCCcCHHHHHHHHHHHcCcc
Confidence 65 5899999999999765321 000 001111111111 11 124778899999999988653
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++|++.+|
T Consensus 250 ~~~----------------itG~~i~vdGG 263 (267)
T 1vl8_A 250 AKY----------------VTGQIIFVDGG 263 (267)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred ccC----------------CcCCeEEECCC
Confidence 221 35889998877
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=99.19 E-value=3.1e-10 Score=113.38 Aligned_cols=169 Identities=13% Similarity=0.108 Sum_probs=111.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 58 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 131 (259)
T 3edm_A 58 RSALAIKADLTNAA------EVEAAISAAADKFGEIHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALP 131 (259)
T ss_dssp SCCEEEECCTTCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHhCCCCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999654 3555554 68999999986521 123456889999999999999986
Q ss_pred c-CCCceEEEecCcccc-cCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C-SQLKAILHVSTLYTH-SYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~-~~vkrfV~vSS~~v~-g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
. ....+||++||...+ .... ....|+.||++.+.+++.+
T Consensus 132 ~~~~~g~iv~isS~~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 172 (259)
T 3edm_A 132 KMAKGGAIVTFSSQAGRDGGGP---------------------------------------GALAYATSKGAVMTFTRGL 172 (259)
T ss_dssp GEEEEEEEEEECCHHHHHCCST---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCEEEEEcCHHhccCCCC---------------------------------------CcHHHHHHHHHHHHHHHHH
Confidence 2 112489999998765 2100 1246999999999999876
Q ss_pred h----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 420 L----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 420 ~----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
+ +++.+.++.||.|..+..... .. ..+...+ ........+..++|+|++++.++.....
T Consensus 173 a~e~~~~I~vn~v~PG~v~T~~~~~~-------~~-~~~~~~~---------~~~~p~~r~~~pedva~~v~~L~s~~~~ 235 (259)
T 3edm_A 173 AKEVGPKIRVNAVCPGMISTTFHDTF-------TK-PEVRERV---------AGATSLKREGSSEDVAGLVAFLASDDAA 235 (259)
T ss_dssp HHHHTTTCEEEEEEECCBCC---------------------------------------CCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHHCCCCEEEEEEECCCcCcccccc-------cC-hHHHHHH---------HhcCCCCCCcCHHHHHHHHHHHcCcccc
Confidence 6 449999999999976532111 00 0000000 0111223567899999999998865432
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|++|++.++
T Consensus 236 ~----------------itG~~i~vdGg 247 (259)
T 3edm_A 236 Y----------------VTGACYDINGG 247 (259)
T ss_dssp T----------------CCSCEEEESBC
T ss_pred C----------------ccCCEEEECCC
Confidence 1 36899999887
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=99.18 E-value=1.1e-10 Score=115.90 Aligned_cols=202 Identities=10% Similarity=0.037 Sum_probs=123.8
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEE
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIH 310 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH 310 (596)
.+||.+.++.-+..-...++... ++-.-+ .+... ..+..+.+|++++ +.+..+++ .+|+|||
T Consensus 17 ~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r--~~~~~-~~~~~~~~D~~~~------~~~~~~~~~~~~~~g~id~lv~ 87 (247)
T 1uzm_A 17 SVLVTGGNRGIGLAIAQRLAADGHKVAVTHR--GSGAP-KGLFGVEVDVTDS------DAVDRAFTAVEEHQGPVEVLVS 87 (247)
T ss_dssp EEEETTTTSHHHHHHHHHHHHTTCEEEEEES--SSCCC-TTSEEEECCTTCH------HHHHHHHHHHHHHHSSCSEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC--ChHHH-HHhcCeeccCCCH------HHHHHHHHHHHHHcCCCCEEEE
Confidence 46777776655555444444321 110000 01111 2233477888854 33555544 5799999
Q ss_pred cCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHH
Q psy5825 311 AAASLRFD-------ELIQDAFTLNIQATRELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHV 380 (596)
Q Consensus 311 ~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~ 380 (596)
+||..... ..+..++++|+.|+.++++++... .+..+||++||.+.+....
T Consensus 88 ~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~~~~~------------------- 148 (247)
T 1uzm_A 88 NAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRSMQRNKFGRMIFIGSVSGLWGIG------------------- 148 (247)
T ss_dssp ECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCCC------------------------
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCEEEEECCHhhccCCC-------------------
Confidence 99975421 345668899999999999988641 3568999999987543100
Q ss_pred HhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHH
Q psy5825 381 MQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAA 455 (596)
Q Consensus 381 ~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~ 455 (596)
....|+.||+..+.+++.++ .|+.+++++||.|.++... .+ ...+.
T Consensus 149 --------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~t~~~~-------~~--~~~~~ 199 (247)
T 1uzm_A 149 --------------------NQANYAASKAGVIGMARSIARELSKANVTANVVAPGYIDTDMTR-------AL--DERIQ 199 (247)
T ss_dssp --------------------CCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------HS--CHHHH
T ss_pred --------------------CChhHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEeCCCcccchh-------hc--CHHHH
Confidence 12469999999988887765 5899999999999664210 00 11111
Q ss_pred HHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 456 AGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 456 ~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..+ .. .++ ...+++++|+|++++.++...... ..|++|++.+|
T Consensus 200 ~~~-~~---~~p-----~~~~~~~~dvA~~~~~l~s~~~~~----------------~~G~~i~vdgG 242 (247)
T 1uzm_A 200 QGA-LQ---FIP-----AKRVGTPAEVAGVVSFLASEDASY----------------ISGAVIPVDGG 242 (247)
T ss_dssp HHH-GG---GCT-----TCSCBCHHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred HHH-Hh---cCC-----CCCCcCHHHHHHHHHHHcCccccC----------------CcCCEEEECCC
Confidence 111 11 111 124789999999999988643221 36889999887
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.4e-10 Score=115.75 Aligned_cols=163 Identities=9% Similarity=0.050 Sum_probs=103.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+..++++|+.|+.+|++++...
T Consensus 80 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 153 (301)
T 3tjr_A 80 FDAHGVVCDVRHLD------EMVRLADEAFRLLGGVDVVFSNAGIVVAGPLAQMNHDDWRWVIDIDLWGSIHAVEAFLPR 153 (301)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHhCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 57899999999654 3555554 68999999997532 1234568899999999999998541
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||++.+.... ....|+.||++.+.+++.
T Consensus 154 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~ 194 (301)
T 3tjr_A 154 LLEQGTGGHIAFTASFAGLVPNA---------------------------------------GLGTYGVAKYGVVGLAET 194 (301)
T ss_dssp HHHHCSCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEEeCchhhcCCCC---------------------------------------CchHHHHHHHHHHHHHHH
Confidence 2256899999988654210 224699999999988877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .|+.+++++||.|..+........ . ....... .......+.......+++++|||++++.++..
T Consensus 195 la~e~~~~gi~v~~v~PG~v~T~~~~~~~~~----~---~~~~~~~-~~~~~~~~~~~~~~~~~~pedvA~~i~~~l~~ 265 (301)
T 3tjr_A 195 LAREVKPNGIGVSVLCPMVVETKLVSNSERI----R---GADYGMS-ATPEGAFGPLPTQDESVSADDVARLTADAILA 265 (301)
T ss_dssp HHHHHGGGTEEEEEECCSCCCSSHHHHHHHH----C--------------------------CCCHHHHHHHHHHHHHH
T ss_pred HHHHhcccCcEEEEEECCccccccccccccc----c---chhhccc-cChhhhccccccccCCCCHHHHHHHHHHHHhc
Confidence 65 589999999999965421100000 0 0000000 00000112223345789999999999999865
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.18 E-value=1.8e-10 Score=114.03 Aligned_cols=174 Identities=10% Similarity=0.007 Sum_probs=116.2
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh---ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---CC
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ---HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC---SQ 344 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~---~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~---~~ 344 (596)
++.++.+|++++. .+..+. .++|+|||+||..... ..+...+.+|+.|+.++++++... .+
T Consensus 51 ~~~~~~~D~~~~~------~~~~~~~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~ 124 (246)
T 2ag5_A 51 GIQTRVLDVTKKK------QIDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQK 124 (246)
T ss_dssp TEEEEECCTTCHH------HHHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CceEEEeeCCCHH------HHHHHHHHhCCCCEEEECCccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC
Confidence 6889999999653 354443 4789999999976431 335568899999999999998631 25
Q ss_pred CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----
Q psy5825 345 LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---- 420 (596)
Q Consensus 345 vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---- 420 (596)
..+||++||.+.+.... . ....|+.||+..+.+++.++
T Consensus 125 ~g~iv~isS~~~~~~~~-------------------------------------~-~~~~Y~~sK~a~~~~~~~la~e~~ 166 (246)
T 2ag5_A 125 SGNIINMSSVASSVKGV-------------------------------------V-NRCVYSTTKAAVIGLTKSVAADFI 166 (246)
T ss_dssp CEEEEEECCSBTTTBCC-------------------------------------T-TBHHHHHHHHHHHHHHHHHHHHHG
T ss_pred CceEEEEechHhCcCCC-------------------------------------C-CCccHHHHHHHHHHHHHHHHHHhh
Confidence 67999999987654210 0 11469999999999998765
Q ss_pred -cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCC
Q psy5825 421 -YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGH 499 (596)
Q Consensus 421 -~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~ 499 (596)
.|++++++|||.|+++.... +.........++..+.. . .+ ...++.++|+|++++.++......
T Consensus 167 ~~gi~v~~v~Pg~v~t~~~~~---~~~~~~~~~~~~~~~~~-~---~~-----~~~~~~~~dvA~~v~~l~s~~~~~--- 231 (246)
T 2ag5_A 167 QQGIRCNCVCPGTVDTPSLQE---RIQARGNPEEARNDFLK-R---QK-----TGRFATAEEIAMLCVYLASDESAY--- 231 (246)
T ss_dssp GGTEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHHHHH-T---CT-----TSSCEEHHHHHHHHHHHHSGGGTT---
T ss_pred hcCcEEEEEeeCcCcCcchhh---hhhcccCcHHHHHHHHh-c---CC-----CCCCCCHHHHHHHHHHHhCccccC---
Confidence 58999999999998863210 00000000111111111 0 11 124789999999999988543321
Q ss_pred CCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 500 VAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 500 ~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++|++.+|
T Consensus 232 -------------~tG~~i~vdgG 242 (246)
T 2ag5_A 232 -------------VTGNPVIIDGG 242 (246)
T ss_dssp -------------CCSCEEEECTT
T ss_pred -------------CCCCEEEECCC
Confidence 35889999877
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=99.18 E-value=3.4e-10 Score=114.93 Aligned_cols=168 Identities=14% Similarity=0.152 Sum_probs=114.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++.. +..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 87 ~~~~~~~~Dv~d~~~------v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 160 (287)
T 3rku_A 87 AKVHVAQLDITQAEK------IKPFIENLPQEFKDIDILVNNAGKALGSDRVGQIATEDIQDVFDTNVTALINITQAVLP 160 (287)
T ss_dssp CEEEEEECCTTCGGG------HHHHHHTSCGGGCSCCEEEECCCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHHH------HHHHHHHHHHhcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 578999999997653 666664 58999999997531 234567899999999999999852
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||++.+.... ....|+.||++.+.+++.
T Consensus 161 ~m~~~~~g~IV~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~ 201 (287)
T 3rku_A 161 IFQAKNSGDIVNLGSIAGRDAYP---------------------------------------TGSIYCASKFAVGAFTDS 201 (287)
T ss_dssp HHHHHTCCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCeEEEECChhhcCCCC---------------------------------------CCchHHHHHHHHHHHHHH
Confidence 13557999999987653210 124699999999999887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.|..+... ................ ...+.++|||++++.++...
T Consensus 202 la~e~~~~gIrvn~v~PG~v~T~~~~------~~~~~~~~~~~~~~~~------------~~p~~pedvA~~v~~l~s~~ 263 (287)
T 3rku_A 202 LRKELINTKIRVILIAPGLVETEFSL------VRYRGNEEQAKNVYKD------------TTPLMADDVADLIVYATSRK 263 (287)
T ss_dssp HHHHTTTSSCEEEEEEESCEESSHHH------HHTTTCHHHHHHHHTT------------SCCEEHHHHHHHHHHHHTSC
T ss_pred HHHHhhhcCCEEEEEeCCcCcCcccc------ccccCcHHHHHHhhcc------------cCCCCHHHHHHHHHHHhCCC
Confidence 66 6899999999999664210 0000111111111111 01237899999999998654
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|+++++.++
T Consensus 264 ~~~----------------i~g~~i~v~~g 277 (287)
T 3rku_A 264 QNT----------------VIADTLIFPTN 277 (287)
T ss_dssp TTE----------------EEEEEEEEETT
T ss_pred CCe----------------EecceEEeeCC
Confidence 321 24778888776
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.17 E-value=3.6e-10 Score=110.13 Aligned_cols=157 Identities=9% Similarity=-0.034 Sum_probs=105.6
Q ss_pred HHHHHHhc---cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEecCcccccCCccc
Q psy5825 296 HDQQFIQH---HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATRC-SQLKAILHVSTLYTHSYREDI 363 (596)
Q Consensus 296 ~~~~~l~~---~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~v~g~~~~i 363 (596)
+.+..+++ .+|+|||+||.... ...+...+++|+.|+.++++++... ....+||++||...+....
T Consensus 48 ~~v~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~-- 125 (223)
T 3uce_A 48 KSVYHYFETIGAFDHLIVTAGSYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSRKVVA-- 125 (223)
T ss_dssp HHHHHHHHHHCSEEEEEECCCCCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGTSCCT--
T ss_pred HHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhccCCC--
Confidence 34666654 68999999997621 1234568899999999999999862 1224899999988764211
Q ss_pred cccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---cCCCEEEecCCccccCCCCC
Q psy5825 364 QEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---YKLPLAMVRPSIVVSTWKEP 440 (596)
Q Consensus 364 ~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---~gl~~~IlRp~~V~G~~~~p 440 (596)
....|+.||+..+.+++.++ ..+.+++++||.|.++....
T Consensus 126 -------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~i~vn~v~PG~v~t~~~~~ 168 (223)
T 3uce_A 126 -------------------------------------NTYVKAAINAAIEATTKVLAKELAPIRVNAISPGLTKTEAYKG 168 (223)
T ss_dssp -------------------------------------TCHHHHHHHHHHHHHHHHHHHHHTTSEEEEEEECSBCSGGGTT
T ss_pred -------------------------------------CchHHHHHHHHHHHHHHHHHHhhcCcEEEEEEeCCCcchhhhh
Confidence 22469999999999998877 33999999999998764321
Q ss_pred ccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEc
Q psy5825 441 IVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNL 520 (596)
Q Consensus 441 ~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni 520 (596)
. . ............... ....+..++|+|++++.++.... ..|++|++
T Consensus 169 ~-------~--~~~~~~~~~~~~~~~-----~~~~~~~~~dvA~~~~~l~~~~~------------------~tG~~i~v 216 (223)
T 3uce_A 169 M-------N--ADDRDAMYQRTQSHL-----PVGKVGEASDIAMAYLFAIQNSY------------------MTGTVIDV 216 (223)
T ss_dssp S-------C--HHHHHHHHHHHHHHS-----TTCSCBCHHHHHHHHHHHHHCTT------------------CCSCEEEE
T ss_pred c-------c--hhhHHHHHHHHhhcC-----CCCCccCHHHHHHHHHHHccCCC------------------CCCcEEEe
Confidence 1 1 111111111000011 12357889999999999886321 36899999
Q ss_pred cCC
Q psy5825 521 SIS 523 (596)
Q Consensus 521 ~~~ 523 (596)
.+|
T Consensus 217 dgG 219 (223)
T 3uce_A 217 DGG 219 (223)
T ss_dssp STT
T ss_pred cCC
Confidence 887
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.3e-10 Score=116.17 Aligned_cols=177 Identities=11% Similarity=0.042 Sum_probs=114.2
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc--
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC-- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~-- 342 (596)
++.++.+|++++. .+..+++ ++|+|||+||.... ...+...+.+|+.|+.++++++...
T Consensus 59 ~~~~~~~D~~~~~------~v~~~~~~~~~~~gid~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~ 132 (260)
T 2z1n_A 59 QVDIVAGDIREPG------DIDRLFEKARDLGGADILVYSTGGPRPGRFMELGVEDWDESYRLLARSAVWVGRRAAEQMV 132 (260)
T ss_dssp CEEEEECCTTCHH------HHHHHHHHHHHTTCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred eEEEEEccCCCHH------HHHHHHHHHHHhcCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 7899999999653 4666655 49999999996532 1245668899999998887776531
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+..+||++||..++.... ....|+.||+..+.+++.++
T Consensus 133 ~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~ 173 (260)
T 2z1n_A 133 EKGWGRMVYIGSVTLLRPWQ---------------------------------------DLALSNIMRLPVIGVVRTLAL 173 (260)
T ss_dssp HHTCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHTHHHHHHHHHHHH
T ss_pred hcCCcEEEEECchhhcCCCC---------------------------------------CCchhHHHHHHHHHHHHHHHH
Confidence 3568999999998764210 12469999999999987765
Q ss_pred ----cCCCEEEecCCccccCCCCCccc-cCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVG-WSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G-~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+++++++||.|+++....... .............. ...... ....++.++|+|++++.++.....
T Consensus 174 e~~~~gi~v~~v~Pg~v~t~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----p~~r~~~~~dva~~v~~l~s~~~~ 245 (260)
T 2z1n_A 174 ELAPHGVTVNAVLPSLILTDRVRSLAEERARRSGITVEEALK---SMASRI-----PMGRVGKPEELASVVAFLASEKAS 245 (260)
T ss_dssp HHGGGTEEEEEEEECHHHHCCCC--------------------------CC-----TTSSCCCHHHHHHHHHHHTSGGGT
T ss_pred HHhhhCeEEEEEEECCcccchhhhhhhhhhcccCCcHHHHHH---HHHhcC-----CCCCccCHHHHHHHHHHHhCcccc
Confidence 58999999999998864321000 00000000000000 000001 112478999999999998754332
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|++|++.+|
T Consensus 246 ~----------------~tG~~i~vdGG 257 (260)
T 2z1n_A 246 F----------------ITGAVIPVDGG 257 (260)
T ss_dssp T----------------CCSCEEEESTT
T ss_pred C----------------CCCCEEEeCCC
Confidence 1 36889999877
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.17 E-value=3.9e-10 Score=113.23 Aligned_cols=169 Identities=13% Similarity=0.052 Sum_probs=112.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||..... ..+...+++|+.|+.++++++...
T Consensus 77 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 150 (267)
T 3u5t_A 77 GKALTAQADVSDPA------AVRRLFATAEEAFGGVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQR 150 (267)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57899999999653 3555544 689999999975421 235568899999999999998752
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....+||++||..++.... ....|+.||++.+.+++.++
T Consensus 151 ~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~la~ 191 (267)
T 3u5t_A 151 LRVGGRIINMSTSQVGLLHP---------------------------------------SYGIYAAAKAGVEAMTHVLSK 191 (267)
T ss_dssp EEEEEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCeEEEEeChhhccCCC---------------------------------------CchHHHHHHHHHHHHHHHHHH
Confidence 2235899999987643210 12469999999999998876
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+.+.++.||.|..+.... .. ...+...+.. ......+..++|+|++++.++......
T Consensus 192 e~~~~gI~vn~v~PG~v~T~~~~~------~~--~~~~~~~~~~---------~~p~~r~~~pedvA~~v~~L~s~~~~~ 254 (267)
T 3u5t_A 192 ELRGRDITVNAVAPGPTATDLFLE------GK--SDEVRDRFAK---------LAPLERLGTPQDIAGAVAFLAGPDGAW 254 (267)
T ss_dssp HTTTSCCEEEEEEECCBC-------------------CHHHHHT---------SSTTCSCBCHHHHHHHHHHHHSTTTTT
T ss_pred HhhhhCCEEEEEEECCCcCccccc------cC--CHHHHHHHHh---------cCCCCCCcCHHHHHHHHHHHhCccccC
Confidence 58999999999996653210 00 0011111111 111234778999999999988543221
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|+++++.+|
T Consensus 255 ----------------itG~~i~vdGG 265 (267)
T 3u5t_A 255 ----------------VNGQVLRANGG 265 (267)
T ss_dssp ----------------CCSEEEEESSS
T ss_pred ----------------ccCCEEEeCCC
Confidence 36889998876
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=99.17 E-value=1.2e-09 Score=109.86 Aligned_cols=168 Identities=9% Similarity=0.038 Sum_probs=116.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||..... ..+...+.+|+.|+.++++++...
T Consensus 81 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 154 (271)
T 3v2g_A 81 GRAVAIRADNRDAE------AIEQAIRETVEALGGLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRH 154 (271)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999653 3555554 789999999975321 235668899999999999999762
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....+||++||....... ++ ....|+.||+..+.+++.++
T Consensus 155 m~~~g~iv~isS~~~~~~~-------~~-------------------------------~~~~Y~asKaa~~~l~~~la~ 196 (271)
T 3v2g_A 155 LGDGGRIITIGSNLAELVP-------WP-------------------------------GISLYSASKAALAGLTKGLAR 196 (271)
T ss_dssp CCTTCEEEEECCGGGTCCC-------ST-------------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCEEEEEeChhhccCC-------CC-------------------------------CchHHHHHHHHHHHHHHHHHH
Confidence 345689999996543210 00 12469999999999987765
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+++++++||.|.++..... ..... ..... ++ ...+...+|+|++++.++......
T Consensus 197 e~~~~gIrvn~v~PG~v~T~~~~~~-------~~~~~---~~~~~----~~-----~~r~~~pedvA~~v~fL~s~~~~~ 257 (271)
T 3v2g_A 197 DLGPRGITVNIVHPGSTDTDMNPAD-------GDHAE---AQRER----IA-----TGSYGEPQDIAGLVAWLAGPQGKF 257 (271)
T ss_dssp HHGGGTCEEEEEEECSBCSSSSCSS-------CSSHH---HHHHT----CT-----TSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HhhhhCeEEEEEecCCCcCCccccc-------chhHH---HHHhc----CC-----CCCCCCHHHHHHHHHHHhCcccCC
Confidence 589999999999988643211 00111 11111 11 123678999999999888543321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|+++++.+|
T Consensus 258 ----------------itG~~i~vdGG 268 (271)
T 3v2g_A 258 ----------------VTGASLTIDGG 268 (271)
T ss_dssp ----------------CCSCEEEESTT
T ss_pred ----------------ccCCEEEeCcC
Confidence 36899999887
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=99.16 E-value=7.3e-10 Score=111.73 Aligned_cols=177 Identities=8% Similarity=0.051 Sum_probs=117.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||..... ..+...+++|+.|+.++++++...
T Consensus 73 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 146 (277)
T 3tsc_A 73 RRIVAAVVDTRDFD------RLRKVVDDGVAALGRLDIIVANAGVAAPQAWDDITPEDFRDVMDINVTGTWNTVMAGAPR 146 (277)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 67999999999654 3555543 589999999986431 234568999999999999987541
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||++.+.... ....|+.||++.+.+++.
T Consensus 147 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~ 187 (277)
T 3tsc_A 147 IIEGGRGGSIILISSAAGMKMQP---------------------------------------FMIHYTASKHAVTGLARA 187 (277)
T ss_dssp HHHHTSCEEEEEECCGGGTSCCS---------------------------------------SCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCEEEEEccHhhCCCCC---------------------------------------CchhhHHHHHHHHHHHHH
Confidence 2246899999988654211 224699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhc-cceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALG-LIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g-~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .|+.+++++||.|..+.... .....+....... ......... ...-+...+|+|++++.++..
T Consensus 188 la~e~~~~gi~vn~v~PG~v~T~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~-~p~r~~~pedvA~~v~~L~s~ 258 (277)
T 3tsc_A 188 FAAELGKHSIRVNSVHPGPVNTPMGSG--------DMVTAVGQAMETNPQLSHVLTPF-LPDWVAEPEDIADTVCWLASD 258 (277)
T ss_dssp HHHHHGGGTEEEEEEEESSBSSGGGSH--------HHHHHHHHHHHTCGGGTTTTCCS-SSCSCBCHHHHHHHHHHHHSG
T ss_pred HHHHhCccCeEEEEEEeCCCcCCcccc--------hhhhhhhhcccccHHHHHHhhhc-cCCCCCCHHHHHHHHHHHhCc
Confidence 65 58999999999997753210 0000111111000 000001111 112478999999999999865
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|+++++.+|
T Consensus 259 ~~~~----------------itG~~i~vdGG 273 (277)
T 3tsc_A 259 ESRK----------------VTAAQIPVDQG 273 (277)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred cccC----------------CcCCEEeeCCC
Confidence 4321 36899999887
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.7e-09 Score=107.33 Aligned_cols=170 Identities=11% Similarity=0.049 Sum_probs=116.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELL 336 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL 336 (596)
.++.++.+|+++.. .+..+++ .+|+|||+||..... ..+...+.+|+.|+.+++
T Consensus 57 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~~~~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~ 130 (255)
T 3icc_A 57 GSAFSIGANLESLH------GVEALYSSLDNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFII 130 (255)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHHHHHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHH
T ss_pred CceEEEecCcCCHH------HHHHHHHHHHHHhcccccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHH
Confidence 57889999998653 2444332 299999999975321 234568899999999999
Q ss_pred HHHHhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 337 DLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 337 ~~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
+++... ....+||++||.+.+.... ....|+.||++.+.+
T Consensus 131 ~~~~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~ 171 (255)
T 3icc_A 131 QQALSRLRDNSRIINISSAATRISLP---------------------------------------DFIAYSMTKGAINTM 171 (255)
T ss_dssp HHHTTTEEEEEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHH
T ss_pred HHHHHhhCCCCEEEEeCChhhccCCC---------------------------------------CcchhHHhHHHHHHH
Confidence 999762 1335899999987654211 124699999999999
Q ss_pred HHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 416 VEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 416 v~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
+..++ .|+.+++++||.|..+..... ... ..+....... .....+..++|+|++++.++
T Consensus 172 ~~~la~e~~~~gi~v~~v~PG~v~t~~~~~~-------~~~-~~~~~~~~~~--------~~~~~~~~~~dva~~~~~l~ 235 (255)
T 3icc_A 172 TFTLAKQLGARGITVNAILPGFVKTDMNAEL-------LSD-PMMKQYATTI--------SAFNRLGEVEDIADTAAFLA 235 (255)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCBCCSSSTTT-------TTS-HHHHHHHHHT--------STTSSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCeEEEEEEEeeecccchhhh-------ccc-HHHHHhhhcc--------CCcCCCCCHHHHHHHHHHHh
Confidence 87765 689999999999977643211 111 1111211111 11235678999999999888
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... ..|++|++.+|
T Consensus 236 s~~~~~----------------~tG~~i~vdgG 252 (255)
T 3icc_A 236 SPDSRW----------------VTGQLIDVSGG 252 (255)
T ss_dssp SGGGTT----------------CCSCEEEESSS
T ss_pred CcccCC----------------ccCCEEEecCC
Confidence 543321 36899999887
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=4.4e-10 Score=112.58 Aligned_cols=167 Identities=10% Similarity=0.015 Sum_probs=115.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||..... ..+...+.+|+.|+.++++++...
T Consensus 52 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 125 (263)
T 2a4k_A 52 AEAIAVVADVSDPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV 125 (263)
T ss_dssp SSEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999653 4555554 479999999975421 234568899999999999999763
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....+||++||.++++. . ....|+.||+..+.+++.++
T Consensus 126 ~~~~g~iv~isS~~~~~~-~---------------------------------------~~~~Y~asK~a~~~~~~~la~ 165 (263)
T 2a4k_A 126 LEEGGSLVLTGSVAGLGA-F---------------------------------------GLAHYAAGKLGVVGLARTLAL 165 (263)
T ss_dssp CCTTCEEEEECCCTTCCH-H---------------------------------------HHHHHHHCSSHHHHHHHHHHH
T ss_pred HhcCCEEEEEecchhcCC-C---------------------------------------CcHHHHHHHHHHHHHHHHHHH
Confidence 12469999999987621 0 11359999998888877654
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+.+++++||.|.++... .+ ...+...+.. . .+ ...++..+|+|++++.++......
T Consensus 166 e~~~~gi~v~~v~PG~v~t~~~~-------~~--~~~~~~~~~~-~---~p-----~~~~~~p~dvA~~v~~l~s~~~~~ 227 (263)
T 2a4k_A 166 ELARKGVRVNVLLPGLIQTPMTA-------GL--PPWAWEQEVG-A---SP-----LGRAGRPEEVAQAALFLLSEESAY 227 (263)
T ss_dssp HHTTTTCEEEEEEECSBCCGGGT-------TS--CHHHHHHHHH-T---ST-----TCSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HhhhhCcEEEEEEeCcCcCchhh-------hc--CHHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHhCccccC
Confidence 6899999999999876421 11 1122211111 1 11 124788999999999988643321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++|++.++
T Consensus 228 ----------------~tG~~i~vdgG 238 (263)
T 2a4k_A 228 ----------------ITGQALYVDGG 238 (263)
T ss_dssp ----------------CCSCEEEESTT
T ss_pred ----------------CcCCEEEECCC
Confidence 35889999887
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.16 E-value=2.1e-09 Score=111.25 Aligned_cols=173 Identities=12% Similarity=0.033 Sum_probs=116.4
Q ss_pred CcEEEEEeccCCCCC-----------CCCHHHHHHHhc-------cccEEEEcCccCCh---------------------
Q psy5825 277 RKVHIISGDISQPSL-----------GISSHDQQFIQH-------HIHVIIHAAASLRF--------------------- 317 (596)
Q Consensus 277 ~rv~~v~GDl~~~~l-----------GL~~~~~~~l~~-------~vd~ViH~AA~v~~--------------------- 317 (596)
.++.++.+||+++.. +-+...+..+++ .+|+|||+||....
T Consensus 97 ~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~e~~~~~~~~~ 176 (328)
T 2qhx_A 97 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 176 (328)
T ss_dssp TCEEEEECCCSSSCBCC-------CCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCC-------------CHH
T ss_pred CeEEEEEeeCCCchhccccccccccccccHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence 478999999998760 000012444443 78999999997532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc---CC------CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHH
Q psy5825 318 DELIQDAFTLNIQATRELLDLATRC---SQ------LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEE 388 (596)
Q Consensus 318 ~~~~~~~~~~NV~GT~~LL~~a~~~---~~------vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~ 388 (596)
...+..++.+|+.|+.+|++++... .+ ..+||++||+..+....
T Consensus 177 ~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~~~~~~~g~IV~isS~~~~~~~~--------------------------- 229 (328)
T 2qhx_A 177 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL--------------------------- 229 (328)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHHSCGGGSCSCEEEEEECCTTTTSCCT---------------------------
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcCCCCCcEEEEECchhhccCCC---------------------------
Confidence 2334568899999999999988641 23 57999999987654210
Q ss_pred HHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc
Q psy5825 389 LEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI 463 (596)
Q Consensus 389 ~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~ 463 (596)
....|+.||++.+.+++.++ .|+.+++++||.|..+. . . ...++..+.. .
T Consensus 230 ------------~~~~Y~asKaal~~l~~~la~el~~~gIrvn~v~PG~v~T~~-~-------~---~~~~~~~~~~-~- 284 (328)
T 2qhx_A 230 ------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD-D-------M---PPAVWEGHRS-K- 284 (328)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCC-C-------S---CHHHHHHHHT-T-
T ss_pred ------------CcHHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCCc-c-------c---cHHHHHHHHh-h-
Confidence 12469999999999988765 58999999999997753 1 1 1122222211 1
Q ss_pred eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 464 HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 464 ~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++. . .-+..++|+|++++.++...... ..|.+|++.+|
T Consensus 285 --~p~---~-~r~~~pedvA~~v~~l~s~~~~~----------------itG~~i~vdGG 322 (328)
T 2qhx_A 285 --VPL---Y-QRDSSAAEVSDVVIFLCSSKAKY----------------ITGTCVKVDGG 322 (328)
T ss_dssp --CTT---T-TSCBCHHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred --CCC---C-CCCCCHHHHHHHHHHHhCccccC----------------ccCcEEEECCC
Confidence 111 0 03678999999999998543221 36889999887
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=99.16 E-value=1.3e-10 Score=116.37 Aligned_cols=168 Identities=10% Similarity=0.080 Sum_probs=108.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+.+|+.|+.++++++...
T Consensus 63 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 136 (262)
T 3ksu_A 63 AKVALYQSDLSNEE------EVAKLFDFAEKEFGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKH 136 (262)
T ss_dssp CEEEEEECCCCSHH------HHHHHHHHHHHHHCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHh
Confidence 57999999999653 4555554 68999999997532 1234568899999999999999862
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+..+||++||.+.+.... ....|+.||++.+.+++.++
T Consensus 137 m~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~la~ 177 (262)
T 3ksu_A 137 MNPNGHIITIATSLLAAYTG---------------------------------------FYSTYAGNKAPVEHYTRAASK 177 (262)
T ss_dssp EEEEEEEEEECCCHHHHHHC---------------------------------------CCCC-----CHHHHHHHHHHH
T ss_pred hcCCCEEEEEechhhccCCC---------------------------------------CCchhHHHHHHHHHHHHHHHH
Confidence 2346899999987654210 12459999999999998776
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+.+.++.||.|..+.... ... ... .... ........+...+|+|++++.++.. ...
T Consensus 178 e~~~~gi~vn~v~PG~v~T~~~~~-------~~~-~~~-~~~~--------~~~~~~~r~~~pedvA~~v~~L~s~-~~~ 239 (262)
T 3ksu_A 178 ELMKQQISVNAIAPGPMDTSFFYG-------QET-KES-TAFH--------KSQAMGNQLTKIEDIAPIIKFLTTD-GWW 239 (262)
T ss_dssp HTTTTTCEEEEEEECCCCTHHHHT-------CC----------------------CCCCSCCGGGTHHHHHHHHTT-TTT
T ss_pred HHHHcCcEEEEEeeCCCcCccccc-------cCc-hHH-HHHH--------HhcCcccCCCCHHHHHHHHHHHcCC-CCC
Confidence 58999999999985532100 000 000 0000 0111122467889999999998865 321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|+++++.+|
T Consensus 240 ----------------itG~~i~vdGg 250 (262)
T 3ksu_A 240 ----------------INGQTIFANGG 250 (262)
T ss_dssp ----------------CCSCEEEESTT
T ss_pred ----------------ccCCEEEECCC
Confidence 36899999887
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=2.7e-10 Score=113.09 Aligned_cols=170 Identities=14% Similarity=0.079 Sum_probs=111.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ .++|+|||+||.... ...+...+.+|+.|+.++++++...
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 127 (249)
T 2ew8_A 54 RRVLTVKCDVSQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG 127 (249)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999653 355553 478999999997542 1235568899999998888885421
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||..++.... ....|+.||+..+.+++.+
T Consensus 128 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 168 (249)
T 2ew8_A 128 MKRNGWGRIINLTSTTYWLKIE---------------------------------------AYTHYISTKAANIGFTRAL 168 (249)
T ss_dssp HHHHTCEEEEEECCGGGGSCCS---------------------------------------SCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCeEEEEEcchhhccCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 3468999999988764211 2246999999999999876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++.... .... .. ........ .+ ...++.++|+|++++.++....
T Consensus 169 a~e~~~~gi~v~~v~Pg~v~t~~~~~------~~~~--~~-~~~~~~~~--~~-----~~~~~~p~dva~~~~~l~s~~~ 232 (249)
T 2ew8_A 169 ASDLGKDGITVNAIAPSLVRTATTEA------SALS--AM-FDVLPNML--QA-----IPRLQVPLDLTGAAAFLASDDA 232 (249)
T ss_dssp HHHHGGGTEEEEEEEECCC---------------------------CTT--SS-----SCSCCCTHHHHHHHHHHTSGGG
T ss_pred HHHHHhcCcEEEEEecCcCcCccchh------cccc--ch-hhHHHHhh--Cc-----cCCCCCHHHHHHHHHHHcCccc
Confidence 5 58999999999998763210 0000 00 00001000 11 1247889999999999875432
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|++|++.+|
T Consensus 233 ~~----------------~tG~~~~vdGG 245 (249)
T 2ew8_A 233 SF----------------ITGQTLAVDGG 245 (249)
T ss_dssp TT----------------CCSCEEEESSS
T ss_pred CC----------------CCCcEEEECCC
Confidence 21 36889999887
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=99.15 E-value=5.3e-10 Score=109.53 Aligned_cols=142 Identities=13% Similarity=0.038 Sum_probs=95.3
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh--
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR-- 341 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~-- 341 (596)
++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+.+|+.|+.++++.+..
T Consensus 51 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~ 124 (234)
T 2ehd_A 51 GALPLPGDVREEG------DWARAVAAMEEAFGELSALVNNAGVGVMKPVHELTLEEWRLVLDTNLTGAFLGIRHAVPAL 124 (234)
T ss_dssp TCEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred hceEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 6889999999643 3555443 68999999997542 123556889999999877766542
Q ss_pred -cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 -CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 -~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
..+..+|||+||.+++.... ....|+.||+..+.++..++
T Consensus 125 ~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la 165 (234)
T 2ehd_A 125 LRRGGGTIVNVGSLAGKNPFK---------------------------------------GGAAYNASKFGLLGLAGAAM 165 (234)
T ss_dssp HTTTCEEEEEECCTTTTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhCCCcEEEEECCchhcCCCC---------------------------------------CCchhhHHHHHHHHHHHHHH
Confidence 14578999999988764210 12469999999988876654
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.|++++++|||.|..+... . . .. . +.++..+|+|++++.++...
T Consensus 166 ~e~~~~gi~v~~v~Pg~v~t~~~~-------~----------~-~~---~--------~~~~~~~dvA~~~~~l~~~~ 214 (234)
T 2ehd_A 166 LDLREANVRVVNVLPGSVDTGFAG-------N----------T-PG---Q--------AWKLKPEDVAQAVLFALEMP 214 (234)
T ss_dssp HHHGGGTEEEEEEECC---------------------------------------------CCHHHHHHHHHHHHHSC
T ss_pred HHHhhcCcEEEEEEeCCCcCCccc-------c----------c-cc---c--------cCCCCHHHHHHHHHHHhCCC
Confidence 6899999999998654210 0 0 00 0 01578999999999988653
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=99.15 E-value=1.2e-09 Score=107.16 Aligned_cols=147 Identities=14% Similarity=0.122 Sum_probs=104.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||..... ..+..++++|+.|+.++++++...
T Consensus 52 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 125 (235)
T 3l77_A 52 VEVFYHHLDVSKAE------SVEEFSKKVLERFGDVDVVVANAGLGYFKRLEELSEEEFHEMIEVNLLGVWRTLKAFLDS 125 (235)
T ss_dssp CCEEEEECCTTCHH------HHHHHCC-HHHHHSSCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEeccCCHH------HHHHHHHHHHHhcCCCCEEEECCccccccCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 68999999999653 4666654 689999999975422 335568899999999999998642
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..++|++||...+.... ....|+.||++.+.+++.+.
T Consensus 126 ~~~~~~~ii~~sS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~l~ 166 (235)
T 3l77_A 126 LKRTGGLALVTTSDVSARLIP---------------------------------------YGGGYVSTKWAARALVRTFQ 166 (235)
T ss_dssp HHHHTCEEEEECCGGGSSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCcEEEEecchhcccCC---------------------------------------CcchHHHHHHHHHHHHHHHh
Confidence 1235677777765432100 22469999999999998865
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
.|+.+++++||.|..+..... . . ......++..+|+|++++.++....
T Consensus 167 ~~~~~i~v~~v~PG~v~T~~~~~~-------~------------------~-~~~~~~~~~p~dva~~v~~l~~~~~ 217 (235)
T 3l77_A 167 IENPDVRFFELRPGAVDTYFGGSK-------P------------------G-KPKEKGYLKPDEIAEAVRCLLKLPK 217 (235)
T ss_dssp HHCTTSEEEEEEECSBSSSTTTCC-------S------------------C-CCGGGTCBCHHHHHHHHHHHHTSCT
T ss_pred hcCCCeEEEEEeCCcccccccccc-------C------------------C-cccccCCCCHHHHHHHHHHHHcCCC
Confidence 799999999999865432110 0 0 0111257889999999999987643
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=99.15 E-value=9.6e-11 Score=117.60 Aligned_cols=181 Identities=11% Similarity=0.041 Sum_probs=117.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc---C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC---S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~---~ 343 (596)
..+.++.+|++++. .+..+++ .+|+|||+||.... ...+...+++|+.|+.++++++... .
T Consensus 61 ~~~~~~~~D~~~~~------~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~ 134 (267)
T 3t4x_A 61 AILQPVVADLGTEQ------GCQDVIEKYPKVDILINNLGIFEPVEYFDIPDEDWFKLFEVNIMSGVRLTRSYLKKMIER 134 (267)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHCCCCSEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHT
T ss_pred ceEEEEecCCCCHH------HHHHHHHhcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC
Confidence 46889999999653 3566654 68999999997542 1234567899999988887776541 3
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
+..+||++||...+.... ....|+.||++.+.+++.++
T Consensus 135 ~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~la~e~ 175 (267)
T 3t4x_A 135 KEGRVIFIASEAAIMPSQ---------------------------------------EMAHYSATKTMQLSLSRSLAELT 175 (267)
T ss_dssp TEEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcchhhccCCC---------------------------------------cchHHHHHHHHHHHHHHHHHHHh
Confidence 557999999988754210 22469999999999998776
Q ss_pred --cCCCEEEecCCccccCCCCCcc-ccCCCC-CCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIV-GWSNNL-YGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~-G~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+.+.++.||.|..+...... ...... ..+......+..... + ......+..++|+|++++.++......
T Consensus 176 ~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~r~~~pedvA~~v~fL~s~~~~~ 250 (267)
T 3t4x_A 176 TGTNVTVNTIMPGSTLTEGVETMLNSLYPNEQLTIEEAEKRFMKENR---P--TSIIQRLIRPEEIAHLVTFLSSPLSSA 250 (267)
T ss_dssp TTSEEEEEEEEECCBCCHHHHHHHHHSSTTSCCCHHHHHHHHHHHHC---T--TCSSCSCBCTHHHHHHHHHHHSGGGTT
T ss_pred CCCCeEEEEEeCCeecCccHHHHHhhcCcccCCCHHHHHHHHhhccC---C--cccccCccCHHHHHHHHHHHcCccccC
Confidence 5789999999998664211000 000000 000111111111111 1 112246889999999999988643321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++|++.+|
T Consensus 251 ----------------itG~~i~vdGG 261 (267)
T 3t4x_A 251 ----------------INGSALRIDGG 261 (267)
T ss_dssp ----------------CCSCEEEESTT
T ss_pred ----------------ccCCeEEECCC
Confidence 36899999988
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=99.14 E-value=5.1e-10 Score=113.01 Aligned_cols=167 Identities=11% Similarity=0.041 Sum_probs=114.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCCh-------------hhhHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRF-------------DELIQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~-------------~~~~~~~~~~NV~GT~~LL~ 337 (596)
.++.++.+|+++.. .+..+++ .+|+|||+||.+.. ...+...+++|+.|+.++++
T Consensus 76 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~~id~lv~~aag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~ 149 (281)
T 3ppi_A 76 NRAEFVSTNVTSED------SVLAAIEAANQLGRLRYAVVAHGGFGVAQRIVQRDGSPADMGGFTKTIDLYLNGTYNVAR 149 (281)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHTTSSEEEEEEECCCCCCCCCCSBCTTSCBCCHHHHHHHHHHHTHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHhCCCCeEEEccCcccccccccccccccCCHHHHHHHHHHHhHHHHHHHH
Confidence 67999999999653 4565554 68999999553321 11256789999999999999
Q ss_pred HHHhc---------CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHH
Q psy5825 338 LATRC---------SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFT 408 (596)
Q Consensus 338 ~a~~~---------~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~S 408 (596)
++... .+..+||++||.+.+.... ....|+.|
T Consensus 150 ~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~as 190 (281)
T 3ppi_A 150 LVAASIAAAEPRENGERGALVLTASIAGYEGQI---------------------------------------GQTAYAAA 190 (281)
T ss_dssp HHHHHHHTSCCCTTSCCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHH
T ss_pred HHHHHHHhhcccccCCCeEEEEEecccccCCCC---------------------------------------CCcccHHH
Confidence 88641 1345899999988764211 12469999
Q ss_pred HHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHH
Q psy5825 409 KAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVAT 483 (596)
Q Consensus 409 K~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva 483 (596)
|++.+.+++.++ .|+.+++++||.|..+... .+ .......+..+ . + ....++.++|+|
T Consensus 191 Kaa~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~-------~~--~~~~~~~~~~~-~---~----~~~~~~~pedvA 253 (281)
T 3ppi_A 191 KAGVIGLTIAAARDLSSAGIRVNTIAPGTMKTPIME-------SV--GEEALAKFAAN-I---P----FPKRLGTPDEFA 253 (281)
T ss_dssp HHHHHHHHHHHHHHHGGGTEEEEEEEECSBCCHHHH-------TT--CHHHHHHHHHT-C---C----SSSSCBCHHHHH
T ss_pred HHHHHHHHHHHHHHHhhcCeEEEEEecCcCCchhhh-------cc--cHHHHHHHHhc-C---C----CCCCCCCHHHHH
Confidence 999988887665 6899999999999664221 10 11222222221 1 1 113578999999
Q ss_pred HHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 484 NMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 484 ~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
++++.++.... ..|+++++.+|
T Consensus 254 ~~v~~l~s~~~------------------~tG~~i~vdGG 275 (281)
T 3ppi_A 254 DAAAFLLTNGY------------------INGEVMRLDGA 275 (281)
T ss_dssp HHHHHHHHCSS------------------CCSCEEEESTT
T ss_pred HHHHHHHcCCC------------------cCCcEEEECCC
Confidence 99999986421 36899999988
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=99.14 E-value=5.3e-10 Score=112.22 Aligned_cols=156 Identities=12% Similarity=0.057 Sum_probs=107.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+..++++|+.|+.++++++..
T Consensus 59 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 132 (266)
T 3p19_A 59 PNTLCAQVDVTDKY------TFDTAITRAEKIYGPADAIVNNAGMMLLGQIDTQEANEWQRMFDVNVLGLLNGMQAVLAP 132 (266)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHCSEEEEEECCCCCCCCCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEEEecCCCHH------HHHHHHHHHHHHCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 47889999999653 3555554 78999999997532 133556899999999998888752
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..+||++||.+.+.... ....|+.||+..+.+.+.+
T Consensus 133 ~~~~~~g~IV~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 173 (266)
T 3p19_A 133 MKARNCGTIINISSIAGKKTFP---------------------------------------DHAAYCGTKFAVHAISENV 173 (266)
T ss_dssp HHHHTCCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCcEEEEEcChhhCCCCC---------------------------------------CCchHHHHHHHHHHHHHHH
Confidence 13567999999988764210 1246999999999888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+ .|+.+++++||.|.++.... .. .......+.... .+ ...++.++|||++++.++...
T Consensus 174 a~e~~~~gi~vn~v~PG~v~T~~~~~-------~~-~~~~~~~~~~~~---~~-----~~r~~~pedvA~av~~l~~~~ 236 (266)
T 3p19_A 174 REEVAASNVRVMTIAPSAVKTELLSH-------TT-SQQIKDGYDAWR---VD-----MGGVLAADDVARAVLFAYQQP 236 (266)
T ss_dssp HHHHGGGTCEEEEEEECSBSSSGGGG-------CS-CHHHHHHHHHHH---HH-----TTCCBCHHHHHHHHHHHHHSC
T ss_pred HHHhcccCcEEEEEeeCccccchhhc-------cc-chhhhHHHHhhc---cc-----ccCCCCHHHHHHHHHHHHcCC
Confidence 5 68999999999998764211 11 111111111100 01 124788999999999998754
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=99.14 E-value=4e-10 Score=114.49 Aligned_cols=178 Identities=11% Similarity=0.050 Sum_probs=114.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCCh-----hhhHHHHHHHHHHHHHHHHHHHHhcCCCceE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRF-----DELIQDAFTLNIQATRELLDLATRCSQLKAI 348 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~-----~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrf 348 (596)
.++.++.+||+++ +.+..+++ .+|+|||+||.... ...+...+.+|+.|+.+|++++.. ...++|
T Consensus 62 ~~~~~~~~Dl~d~------~~v~~~~~~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~-~~~~ri 134 (291)
T 3rd5_A 62 GQVEVRELDLQDL------SSVRRFADGVSGADVLINNAGIMAVPYALTVDGFESQIGTNHLGHFALTNLLLP-RLTDRV 134 (291)
T ss_dssp SEEEEEECCTTCH------HHHHHHHHTCCCEEEEEECCCCCSCCCCBCTTSCBHHHHHHTHHHHHHHHHHGG-GEEEEE
T ss_pred CCeeEEEcCCCCH------HHHHHHHHhcCCCCEEEECCcCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHH-HHHhhe
Confidence 5799999999964 34777776 67999999997642 133456899999999999999987 345699
Q ss_pred EEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cC-
Q psy5825 349 LHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YK- 422 (596)
Q Consensus 349 V~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~g- 422 (596)
|++||.+.+........-... . .+ .. ....|+.||++.+.+++.++ .|
T Consensus 135 v~isS~~~~~~~~~~~~~~~~----------------~------~~---~~-~~~~Y~~sK~a~~~~~~~la~e~~~~g~ 188 (291)
T 3rd5_A 135 VTVSSMAHWPGRINLEDLNWR----------------S------RR---YS-PWLAYSQSKLANLLFTSELQRRLTAAGS 188 (291)
T ss_dssp EEECCGGGTTCCCCSSCTTCS----------------S------SC---CC-HHHHHHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred eEeechhhccCCCCccccccc----------------c------cC---CC-CcchHHHHHHHHHHHHHHHHHHHhhCCC
Confidence 999999876532211000000 0 00 00 12469999999999987765 45
Q ss_pred -CCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCC
Q psy5825 423 -LPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVA 501 (596)
Q Consensus 423 -l~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~ 501 (596)
+.+++++||.|..+..... ...+ ..... ..+ ..+-..+++++|++++.++... .
T Consensus 189 ~i~v~~v~PG~v~T~~~~~~---------~~~~-~~~~~----~~~----~~~~~~~~~~~A~~~~~l~~~~-~------ 243 (291)
T 3rd5_A 189 PLRALAAHPGYSHTNLQGAS---------GRKL-GDALM----SAA----TRVVATDADFGARQTLYAASQD-L------ 243 (291)
T ss_dssp CCEEEEECCSGGGSCC--------------------------------------CHHHHHHHHHHHHHHHSC-C------
T ss_pred CEEEEEeeCCCCcccccccc---------chHH-HHHHH----HHH----HHHHhCCHHHHHHHHHHHHcCC-C------
Confidence 9999999999966532110 0000 00000 011 1122346899999999998763 1
Q ss_pred CCCCcCCCCCCCCCCeEEccCC
Q psy5825 502 PPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 502 ~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++|++.+|
T Consensus 244 -----------~~G~~~~vdgG 254 (291)
T 3rd5_A 244 -----------PGDSFVGPRFG 254 (291)
T ss_dssp -----------CTTCEEEETTS
T ss_pred -----------CCCceeCCccc
Confidence 36888888765
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=99.14 E-value=4.9e-10 Score=122.16 Aligned_cols=147 Identities=17% Similarity=0.181 Sum_probs=105.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccc------cEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHI------HVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRCS 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~v------d~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~~ 343 (596)
.++.++.+|++++ +.+..++..+ |+|||+|+..... ..+...+.+|+.|+.+|++++.. .
T Consensus 279 ~~v~~~~~Dv~d~------~~v~~~~~~i~~~g~ld~VIh~AG~~~~~~l~~~~~~~~~~~~~~nv~g~~~L~~~~~~-~ 351 (486)
T 2fr1_A 279 ARTTVAACDVTDR------ESVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE-L 351 (486)
T ss_dssp CEEEEEECCTTCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT-S
T ss_pred CEEEEEEeCCCCH------HHHHHHHHHHHhcCCCcEEEECCccCCCCccccCCHHHHHHHHHHHHHHHHHHHHHhCc-C
Confidence 5789999999965 4577777654 9999999976421 23456788999999999999987 4
Q ss_pred CCceEEEecCcccc-cCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-c
Q psy5825 344 QLKAILHVSTLYTH-SYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-Y 421 (596)
Q Consensus 344 ~vkrfV~vSS~~v~-g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~ 421 (596)
++.+||++||++.+ |.. ....|+.+|...+.+..... .
T Consensus 352 ~~~~~V~~SS~a~~~g~~----------------------------------------g~~~Yaaaka~l~~la~~~~~~ 391 (486)
T 2fr1_A 352 DLTAFVLFSSFASAFGAP----------------------------------------GLGGYAPGNAYLDGLAQQRRSD 391 (486)
T ss_dssp CCSEEEEEEEHHHHTCCT----------------------------------------TCTTTHHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEEcChHhcCCCC----------------------------------------CCHHHHHHHHHHHHHHHHHHhc
Confidence 78999999997653 321 11459999999999987776 8
Q ss_pred CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 422 KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 422 gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
|+++++++||.+++... .. ...... + ....+.+++.++++.+++.++..
T Consensus 392 gi~v~~i~pG~~~~~gm------~~----------~~~~~~---~---~~~g~~~i~~e~~a~~l~~~l~~ 440 (486)
T 2fr1_A 392 GLPATAVAWGTWAGSGM------AE----------GPVADR---F---RRHGVIEMPPETACRALQNALDR 440 (486)
T ss_dssp TCCCEEEEECCBC-------------------------------C---TTTTEECBCHHHHHHHHHHHHHT
T ss_pred CCeEEEEECCeeCCCcc------cc----------hhHHHH---H---HhcCCCCCCHHHHHHHHHHHHhC
Confidence 99999999999876411 00 000000 1 11234679999999999998864
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.13 E-value=5.3e-10 Score=111.00 Aligned_cols=165 Identities=7% Similarity=0.028 Sum_probs=109.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh---ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc---C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ---HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC---S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~---~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~---~ 343 (596)
.++.++ +|+ ... +..++ .++|+|||+||.... ...+...+.+|+.|+.++++++... .
T Consensus 60 ~~~~~~-~D~-~~~-------~~~~~~~~~~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~ 130 (249)
T 1o5i_A 60 GHRYVV-CDL-RKD-------LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEK 130 (249)
T ss_dssp CSEEEE-CCT-TTC-------HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCeEEE-eeH-HHH-------HHHHHHHhcCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc
Confidence 357777 998 211 34443 378999999997542 1234568899999988776655321 3
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
+..+||++||.+++.... ....|+.||+..+.+++.++
T Consensus 131 ~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~la~e~ 171 (249)
T 1o5i_A 131 GWGRIVAITSFSVISPIE---------------------------------------NLYTSNSARMALTGFLKTLSFEV 171 (249)
T ss_dssp TCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEcchHhcCCCC---------------------------------------CCchHHHHHHHHHHHHHHHHHHh
Confidence 568999999998775311 12469999999999887765
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHH-HHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAA-GAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~-~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
.|+++++++||.|.++... .+ . ..+.. .+.. . . ....+++++|+|++++.++......
T Consensus 172 ~~~gi~v~~v~Pg~v~t~~~~---~~----~--~~~~~~~~~~-~---~-----p~~~~~~~~dvA~~i~~l~s~~~~~- 232 (249)
T 1o5i_A 172 APYGITVNCVAPGWTETERVK---EL----L--SEEKKKQVES-Q---I-----PMRRMAKPEEIASVVAFLCSEKASY- 232 (249)
T ss_dssp GGGTEEEEEEEECSBCCTTHH---HH----S--CHHHHHHHHT-T---S-----TTSSCBCHHHHHHHHHHHHSGGGTT-
T ss_pred hhcCeEEEEEeeCCCccCccc---cc----c--hhhHHHHHHh-c---C-----CCCCCcCHHHHHHHHHHHcCccccC-
Confidence 6899999999999886321 00 0 01111 1111 1 1 1235789999999999888643221
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++|++.++
T Consensus 233 ---------------~tG~~~~vdgG 243 (249)
T 1o5i_A 233 ---------------LTGQTIVVDGG 243 (249)
T ss_dssp ---------------CCSCEEEESTT
T ss_pred ---------------CCCCEEEECCC
Confidence 35889999887
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=99.13 E-value=1.6e-09 Score=108.79 Aligned_cols=179 Identities=17% Similarity=0.099 Sum_probs=116.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||...+. ..+...+++|+.|+.++++++...
T Consensus 68 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 141 (270)
T 3is3_A 68 SDAIAIKADIRQVP------EIVKLFDQAVAHFGHLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRH 141 (270)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57999999999653 3555554 689999999986421 235568899999999999999862
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
....+||++||........ + ....|+.||+..+.+++.++
T Consensus 142 ~~~~g~iv~isS~~~~~~~~-------~-------------------------------~~~~Y~asKaa~~~~~~~la~ 183 (270)
T 3is3_A 142 LTEGGRIVLTSSNTSKDFSV-------P-------------------------------KHSLYSGSKGAVDSFVRIFSK 183 (270)
T ss_dssp CCTTCEEEEECCTTTTTCCC-------T-------------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEeCchhccCCC-------C-------------------------------CCchhHHHHHHHHHHHHHHHH
Confidence 2234899999976321100 0 12469999999999988765
Q ss_pred ----cCCCEEEecCCccccCCCCCcc-ccCCCC-CCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIV-GWSNNL-YGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~-G~~~~~-~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
.|+.+++++||.|..+...... .+.... .............. . ....+..++|+|++++.++....
T Consensus 184 e~~~~gi~vn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~-----p~~r~~~p~dvA~~v~~L~s~~~ 255 (270)
T 3is3_A 184 DCGDKKITVNAVAPGGTVTDMFHEVSHHYIPNGTSYTAEQRQQMAAHA---S-----PLHRNGWPQDVANVVGFLVSKEG 255 (270)
T ss_dssp HHGGGTCEEEEEEECSBCSTTHHHHGGGGSTTGGGSCHHHHHHHHHHH---S-----TTCSCBCHHHHHHHHHHHTSGGG
T ss_pred HhcccCeEEEEEEeCCccChhhhhhhhhccccccccchHHHHHHHHhc---C-----CCCCCCCHHHHHHHHHHHcCCcc
Confidence 6899999999999876421100 000000 00011111111111 1 12246779999999998885433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.+|
T Consensus 256 ~~----------------itG~~i~vdGG 268 (270)
T 3is3_A 256 EW----------------VNGKVLTLDGG 268 (270)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------ccCcEEEeCCC
Confidence 21 36899999887
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=99.12 E-value=5.6e-10 Score=112.68 Aligned_cols=169 Identities=15% Similarity=0.077 Sum_probs=116.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+||+++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 81 ~~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 154 (276)
T 3r1i_A 81 GKALPIRCDVTQPD------QVRGMLDQMTGELGGIDIAVCNAGIVSVQAMLDMPLEEFQRIQDTNVTGVFLTAQAAARA 154 (276)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999654 4666654 78999999998642 1234567899999999999988641
Q ss_pred ----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
....+||++||.+.+.... + . ....|+.||++.+.+++.
T Consensus 155 m~~~~~~g~iv~isS~~~~~~~~-------~-----------------------------~-~~~~Y~asKaa~~~l~~~ 197 (276)
T 3r1i_A 155 MVDQGLGGTIITTASMSGHIINI-------P-----------------------------Q-QVSHYCTSKAAVVHLTKA 197 (276)
T ss_dssp HHHHTSCEEEEEECCGGGTSCCC-------S-----------------------------S-CCHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCcEEEEECchHhcccCC-------C-----------------------------C-CcchHHHHHHHHHHHHHH
Confidence 1236899999987653210 0 0 124699999999999887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.+++++||.|..+..... ..+...+.. . ++ ...+..++|+|++++.++...
T Consensus 198 la~e~~~~gIrvn~v~PG~v~T~~~~~~----------~~~~~~~~~-~---~p-----~~r~~~pedvA~~v~fL~s~~ 258 (276)
T 3r1i_A 198 MAVELAPHQIRVNSVSPGYIRTELVEPL----------ADYHALWEP-K---IP-----LGRMGRPEELTGLYLYLASAA 258 (276)
T ss_dssp HHHHHGGGTEEEEEEEECCBCSTTTGGG----------GGGHHHHGG-G---ST-----TSSCBCGGGSHHHHHHHHSGG
T ss_pred HHHHHhhcCcEEEEEeeCCCcCCccccc----------hHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHcCcc
Confidence 66 689999999999977643211 111111111 1 11 123677899999999988654
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|+++++.+|
T Consensus 259 ~~~----------------itG~~i~vdGG 272 (276)
T 3r1i_A 259 SSY----------------MTGSDIVIDGG 272 (276)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred ccC----------------ccCcEEEECcC
Confidence 321 36899999887
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=9.2e-10 Score=110.28 Aligned_cols=180 Identities=11% Similarity=-0.043 Sum_probs=115.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 59 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 132 (265)
T 3lf2_A 59 ARLFASVCDVLDAL------QVRAFAEACERTLGCASILVNNAGQGRVSTFAETTDEAWSEELQLKFFSVIHPVRAFLPQ 132 (265)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHCSCSEEEECCCCCCCBCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 35899999999653 3554443 67999999997532 1335668899999999999998641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... ....|+.||+..+.+++.+
T Consensus 133 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~l 173 (265)
T 3lf2_A 133 LESRADAAIVCVNSLLASQPEP---------------------------------------HMVATSAARAGVKNLVRSM 173 (265)
T ss_dssp HTTSTTEEEEEEEEGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred hhccCCeEEEEECCcccCCCCC---------------------------------------CchhhHHHHHHHHHHHHHH
Confidence 2456899999987654210 1246999999999998776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++++++||.|.++..................+....... ..+ ....+..++|+|++++.++....
T Consensus 174 a~e~~~~gi~vn~v~PG~v~t~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-----p~~r~~~pedvA~~v~fL~s~~~ 247 (265)
T 3lf2_A 174 AFEFAPKGVRVNGILIGLVESGQWRRRFEAREERELDWAQWTAQLARN-KQI-----PLGRLGKPIEAARAILFLASPLS 247 (265)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHHHHHTC------CHHHHHHHHHHH-TTC-----TTCSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhcccCeEEEEEEeCcCcCchhhhhhhhhhhhccCHHHHHHHHhhc-cCC-----CcCCCcCHHHHHHHHHHHhCchh
Confidence 5 589999999999976532110000000000011111111100 001 12246789999999999886433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.+|
T Consensus 248 ~~----------------itG~~i~vdGG 260 (265)
T 3lf2_A 248 AY----------------TTGSHIDVSGG 260 (265)
T ss_dssp TT----------------CCSEEEEESSS
T ss_pred cC----------------cCCCEEEECCC
Confidence 21 36889999887
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=99.12 E-value=8.3e-10 Score=108.75 Aligned_cols=173 Identities=12% Similarity=0.029 Sum_probs=113.5
Q ss_pred EEEEEeccCCCCCCCCHHHHHH---HhccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc---CCC
Q psy5825 279 VHIISGDISQPSLGISSHDQQF---IQHHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC---SQL 345 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~---l~~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~---~~v 345 (596)
+.++.+|+++ .. + ...+.. .+.++|+|||+||.... ...+...+.+|+.|+.++++++... .+.
T Consensus 45 ~~~~~~D~~~-~~-~-~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~~~~~ 121 (239)
T 2ekp_A 45 AVPLPTDLEK-DD-P-KGLVKRALEALGGLHVLVHAAAVNVRKPALELSYEEWRRVLYLHLDVAFLLAQAAAPHMAEAGW 121 (239)
T ss_dssp CEEEECCTTT-SC-H-HHHHHHHHHHHTSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred cEEEecCCch-HH-H-HHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 6788999998 32 1 111222 23479999999997532 1235668899999999999988531 256
Q ss_pred ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----
Q psy5825 346 KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----- 420 (596)
Q Consensus 346 krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----- 420 (596)
.+||++||.+++.... + . ....|+.||+..+.+++.++
T Consensus 122 g~iv~isS~~~~~~~~-------~-----------------------------~-~~~~Y~~sK~a~~~~~~~la~e~~~ 164 (239)
T 2ekp_A 122 GRVLFIGSVTTFTAGG-------P-----------------------------V-PIPAYTTAKTALLGLTRALAKEWAR 164 (239)
T ss_dssp EEEEEECCGGGTSCCT-------T-----------------------------S-CCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred cEEEEECchhhccCCC-------C-----------------------------C-CCccHHHHHHHHHHHHHHHHHHhhh
Confidence 8999999998765310 0 0 22469999999999988765
Q ss_pred cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCC
Q psy5825 421 YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHV 500 (596)
Q Consensus 421 ~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~ 500 (596)
.|++++++|||.|.++..... .....+...+.. . .+ ...++..+|+|++++.++......
T Consensus 165 ~gi~v~~v~Pg~v~t~~~~~~-------~~~~~~~~~~~~-~---~p-----~~~~~~~~dvA~~~~~l~s~~~~~---- 224 (239)
T 2ekp_A 165 LGIRVNLLCPGYVETEFTLPL-------RQNPELYEPITA-R---IP-----MGRWARPEEIARVAAVLCGDEAEY---- 224 (239)
T ss_dssp GTEEEEEEEECSBCSGGGHHH-------HTCHHHHHHHHT-T---CT-----TSSCBCHHHHHHHHHHHTSGGGTT----
T ss_pred cCcEEEEEEeCCccCchhhcc-------ccCHHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHcCchhcC----
Confidence 589999999999977532100 000111111111 1 11 124789999999999887543221
Q ss_pred CCCCCcCCCCCCCCCCeEEccCC
Q psy5825 501 APPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 501 ~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|+++++.+|
T Consensus 225 ------------~tG~~~~vdgG 235 (239)
T 2ekp_A 225 ------------LTGQAVAVDGG 235 (239)
T ss_dssp ------------CCSCEEEESTT
T ss_pred ------------CCCCEEEECCC
Confidence 35889999877
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.1e-09 Score=119.84 Aligned_cols=148 Identities=16% Similarity=0.159 Sum_probs=107.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhcCCCce
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRCSQLKA 347 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~~~vkr 347 (596)
.++.++.+|++++ +.+..++.. +|+|||+||..... ..+...+.+|+.|+.+|++++..+.++.+
T Consensus 312 ~~v~~~~~Dvtd~------~~v~~~~~~~~ld~VVh~AGv~~~~~~~~~~~~~~~~~~~~nv~g~~~L~~~~~~~~~~~~ 385 (511)
T 2z5l_A 312 CEVVHAACDVAER------DALAALVTAYPPNAVFHTAGILDDAVIDTLSPESFETVRGAKVCGAELLHQLTADIKGLDA 385 (511)
T ss_dssp CEEEEEECCSSCH------HHHHHHHHHSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHHHHHHHHHHHTSSCTTCCC
T ss_pred CEEEEEEeCCCCH------HHHHHHHhcCCCcEEEECCcccCCcccccCCHHHHHHHHHHHHHHHHHHHHHHhhccCCCE
Confidence 4689999999964 457777765 99999999986532 23456889999999999999876336789
Q ss_pred EEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cCCCE
Q psy5825 348 ILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YKLPL 425 (596)
Q Consensus 348 fV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~gl~~ 425 (596)
||++||++. +|.. ....|+.+|+..+.++..+. .|+++
T Consensus 386 ~V~~SS~a~~~g~~----------------------------------------g~~~YaaaKa~ld~la~~~~~~gi~v 425 (511)
T 2z5l_A 386 FVLFSSVTGTWGNA----------------------------------------GQGAYAAANAALDALAERRRAAGLPA 425 (511)
T ss_dssp EEEEEEGGGTTCCT----------------------------------------TBHHHHHHHHHHHHHHHHHHTTTCCC
T ss_pred EEEEeCHHhcCCCC----------------------------------------CCHHHHHHHHHHHHHHHHHHHcCCcE
Confidence 999999854 4421 12469999999999998777 89999
Q ss_pred EEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 426 AMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 426 ~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++++||.+.+. |.... .. ...+.. ..+.+++.++++.+++.++..
T Consensus 426 ~sv~pG~~~~t------gm~~~----~~-~~~~~~-----------~g~~~l~~e~~a~~l~~al~~ 470 (511)
T 2z5l_A 426 TSVAWGLWGGG------GMAAG----AG-EESLSR-----------RGLRAMDPDAAVDALLGAMGR 470 (511)
T ss_dssp EEEEECCBCST------TCCCC----HH-HHHHHH-----------HTBCCBCHHHHHHHHHHHHHH
T ss_pred EEEECCcccCC------ccccc----cc-HHHHHh-----------cCCCCCCHHHHHHHHHHHHhC
Confidence 99999988331 21111 10 011110 113468999999999998865
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=99.12 E-value=2.5e-09 Score=106.00 Aligned_cols=114 Identities=12% Similarity=0.050 Sum_probs=87.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCC----h----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLR----F----DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++ +.+..+++ ++|+|||+||... + ...+..++++|+.|+.++++++..
T Consensus 46 ~~~~~~~~Dv~~~------~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 119 (248)
T 3asu_A 46 DNLYIAQLDVRNR------AAIEEMLASLPAEWCNIDILVNNAGLALGMEPAHKASVEDWETMIDTNNKGLVYMTRAVLP 119 (248)
T ss_dssp TTEEEEECCTTCH------HHHHHHHHTSCTTTCCCCEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCH------HHHHHHHHHHHHhCCCCCEEEECCCcCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 4688999999964 34666665 6899999999752 1 123556889999999999998863
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||.+.+.... ....|+.||+..+.+++.
T Consensus 120 ~m~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~ 160 (248)
T 3asu_A 120 GMVERNHGHIINIGSTAGSWPYA---------------------------------------GGNVYGATKAFVRQFSLN 160 (248)
T ss_dssp HHHHHTCCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCceEEEEccchhccCCC---------------------------------------CCchHHHHHHHHHHHHHH
Confidence 1 2467999999987654210 124699999999999887
Q ss_pred Hh-----cCCCEEEecCCcccc
Q psy5825 419 YL-----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G 435 (596)
++ .|+.+++++||.|.|
T Consensus 161 la~e~~~~gi~v~~v~PG~v~g 182 (248)
T 3asu_A 161 LRTDLHGTAVRVTDIEPGLVGG 182 (248)
T ss_dssp HHHHTTTSCCEEEEEEECSBCC
T ss_pred HHHHhhhcCcEEEEEecccccc
Confidence 65 589999999999985
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=99.12 E-value=1.8e-10 Score=114.74 Aligned_cols=202 Identities=11% Similarity=0.031 Sum_probs=125.3
Q ss_pred EEEeCCCCcccHHHHHHHHhhhh--hHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEE
Q psy5825 240 YILLRSKKNKTVQERLAEQFKDE--LFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIH 310 (596)
Q Consensus 240 ~~LvR~~~~~~~~~Rl~~~~~~~--~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH 310 (596)
.+||.+.++.-+..-...++... ++-..+ .+..+ ..+.++.+|++++. .+..+++ .+|+|||
T Consensus 23 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r--~~~~~-~~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 23 SVLVTGGNRGIGLAIARAFADAGDKVAITYR--SGEPP-EGFLAVKCDITDTE------QVEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEES--SSCCC-TTSEEEECCTTSHH------HHHHHHHHHHHHTCSCSEEEE
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeC--ChHhh-ccceEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEE
Confidence 35677666555555444444421 110000 01112 34778899998653 4555554 4699999
Q ss_pred cCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHH
Q psy5825 311 AAASLRF-------DELIQDAFTLNIQATRELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHV 380 (596)
Q Consensus 311 ~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~ 380 (596)
+||.... ...+...+++|+.|+.++++++... .+..+||++||.+.+....
T Consensus 94 nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~------------------- 154 (253)
T 2nm0_A 94 NAGVTKDQLLMRMSEEDFTSVVETNLTGTFRVVKRANRAMLRAKKGRVVLISSVVGLLGSA------------------- 154 (253)
T ss_dssp ECSCCTTTC---CCTTTTHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCCCCCCCHH-------------------
T ss_pred CCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEECchhhCCCCC-------------------
Confidence 9997542 1245678999999999999987641 2567999999987643100
Q ss_pred HhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHH
Q psy5825 381 MQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAA 455 (596)
Q Consensus 381 ~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~ 455 (596)
....|+.||++.+.+++.++ .|+.+++++||.|..+.... +. ....
T Consensus 155 --------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~vn~v~PG~v~T~~~~~-------~~--~~~~ 205 (253)
T 2nm0_A 155 --------------------GQANYAASKAGLVGFARSLARELGSRNITFNVVAPGFVDTDMTKV-------LT--DEQR 205 (253)
T ss_dssp --------------------HHHHHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEECSBCC------------------CH
T ss_pred --------------------CcHHHHHHHHHHHHHHHHHHHHhhhcCeEEEEEEeCcCcCcchhh-------cC--HHHH
Confidence 11359999999999987765 68999999999986643210 00 0001
Q ss_pred HHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 456 AGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 456 ~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..+.. . .+ ...++..+|+|++++.++...... ..|+++++.++
T Consensus 206 ~~~~~-~---~p-----~~~~~~p~dvA~~i~~l~s~~~~~----------------~tG~~i~vdGG 248 (253)
T 2nm0_A 206 ANIVS-Q---VP-----LGRYARPEEIAATVRFLASDDASY----------------ITGAVIPVDGG 248 (253)
T ss_dssp HHHHT-T---CT-----TCSCBCHHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred HHHHh-c---CC-----CCCCcCHHHHHHHHHHHhCccccC----------------CcCcEEEECCc
Confidence 11111 0 11 124789999999999988654321 36889999887
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=99.12 E-value=6e-10 Score=112.40 Aligned_cols=172 Identities=10% Similarity=0.060 Sum_probs=114.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++.. +..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 82 ~~~~~~~~Dv~~~~~------~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 155 (275)
T 4imr_A 82 GTAQELAGDLSEAGA------GTDLIERAEAIAPVDILVINASAQINATLSALTPNDLAFQLAVNLGSTVDMLQSALPKM 155 (275)
T ss_dssp CCEEEEECCTTSTTH------HHHHHHHHHHHSCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEEEecCCCHHH------HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 578999999998753 444443 68999999997432 1234568899999999999998531
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..+||++||+..+.... ....|+.||++.+.+++.++
T Consensus 156 ~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~la 196 (275)
T 4imr_A 156 VARKWGRVVSIGSINQLRPKS---------------------------------------VVTAYAATKAAQHNLIQSQA 196 (275)
T ss_dssp HHHTCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEECCHHhCCCCC---------------------------------------CchhhHHHHHHHHHHHHHHH
Confidence 3457999999987654210 12459999999999988765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+.+++++||.|..+...... ......+..+..... + ..-+...+|+|++++.++.....
T Consensus 197 ~e~~~~gI~vn~v~PG~v~T~~~~~~~------~~~~~~~~~~~~~~~---p-----~~r~~~pedvA~~v~fL~s~~a~ 262 (275)
T 4imr_A 197 RDFAGDNVLLNTLAPGLVDTDRNADRR------AQDPEGWDEYVRTLN---W-----MGRAGRPEEMVGAALFLASEACS 262 (275)
T ss_dssp HHHGGGTEEEEEEEESSBCSHHHHHHH------HHCHHHHHHHHHHHS---T-----TCSCBCGGGGHHHHHHHHSGGGT
T ss_pred HHhcccCcEEEEEEeccccCccccccc------ccChHHHHHHHhhcC---c-----cCCCcCHHHHHHHHHHHcCcccC
Confidence 5899999999999664210000 000011111111100 1 11356788999999998865432
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|+++++.+|
T Consensus 263 ~----------------itG~~i~vdGG 274 (275)
T 4imr_A 263 F----------------MTGETIFLTGG 274 (275)
T ss_dssp T----------------CCSCEEEESSC
T ss_pred C----------------CCCCEEEeCCC
Confidence 1 36889999876
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.12 E-value=3.2e-10 Score=111.44 Aligned_cols=160 Identities=9% Similarity=0.046 Sum_probs=108.1
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc---------cccEEEEcCccCC---h-----hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH---------HIHVIIHAAASLR---F-----DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~---------~vd~ViH~AA~v~---~-----~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.+.++.+|++++. .+..+++ ++|+|||+||... + ...+...+++|+.|+.++++++.
T Consensus 43 ~~~~~~~D~~~~~------~~~~~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~ 116 (236)
T 1ooe_A 43 SNILVDGNKNWTE------QEQSILEQTASSLQGSQVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLAT 116 (236)
T ss_dssp EEEECCTTSCHHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccEEEeCCCCCHH------HHHHHHHHHHHHhCCCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHH
Confidence 3566778887543 3444443 7999999999643 1 12345688999999999999987
Q ss_pred hc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 341 RC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 341 ~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.. ....+||++||..++.... ....|+.||+..+.+++.+
T Consensus 117 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~l 157 (236)
T 1ooe_A 117 THLKPGGLLQLTGAAAAMGPTP---------------------------------------SMIGYGMAKAAVHHLTSSL 157 (236)
T ss_dssp HHEEEEEEEEEECCGGGGSCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHhccCCEEEEECchhhccCCC---------------------------------------CcHHHHHHHHHHHHHHHHH
Confidence 62 1225899999987753210 1246999999999999887
Q ss_pred h--c-----CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L--Y-----KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~--~-----gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ . |+.+++++||.|.++.. ..... ......+++.+|+|++++.++..
T Consensus 158 a~e~~~~~~gi~v~~v~Pg~v~t~~~-----------------~~~~~---------~~~~~~~~~~~dvA~~i~~~l~s 211 (236)
T 1ooe_A 158 AAKDSGLPDNSAVLTIMPVTLDTPMN-----------------RKWMP---------NADHSSWTPLSFISEHLLKWTTE 211 (236)
T ss_dssp HSTTSSCCTTCEEEEEEESCBCCHHH-----------------HHHST---------TCCGGGCBCHHHHHHHHHHHHHC
T ss_pred HHHhcccCCCeEEEEEecCcccCcch-----------------hhcCC---------CccccccCCHHHHHHHHHHHHcC
Confidence 6 2 48899999999866411 01000 01123568899999999866643
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|.++++.++
T Consensus 212 ~~~~~---------------~~G~~~~v~gg 227 (236)
T 1ooe_A 212 TSSRP---------------SSGALLKITTE 227 (236)
T ss_dssp GGGCC---------------CTTCEEEEEEE
T ss_pred CCccc---------------ccccEEEEecC
Confidence 32211 35888888766
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.12 E-value=2.7e-10 Score=114.62 Aligned_cols=143 Identities=13% Similarity=0.114 Sum_probs=102.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ ++|+|||+||..... ..+...+++|+.|+.+|++++...
T Consensus 80 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 153 (272)
T 1yb1_A 80 AKVHTFVVDCSNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA 153 (272)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CeEEEEEeeCCCHH------HHHHHHHHHHHHCCCCcEEEECCCcCCCcchhhCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 57999999999653 3555544 689999999975421 234568899999988888877531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||..++.... ....|+.||++.+.++..+
T Consensus 154 ~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~l~~~l 194 (272)
T 1yb1_A 154 MTKNNHGHIVTVASAAGHVSVP---------------------------------------FLLAYCSSKFAAVGFHKTL 194 (272)
T ss_dssp HHHTTCEEEEEECCCC-CCCHH---------------------------------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCEEEEEechhhcCCCC---------------------------------------CchhHHHHHHHHHHHHHHH
Confidence 4578999999998764210 1135999999999999876
Q ss_pred h--------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 420 L--------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 420 ~--------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+ .|++++++|||.|.++... .. . . ....+++++|+|++++.++.
T Consensus 195 a~e~~~~~~~gi~v~~v~Pg~v~t~~~~---------~~---~--------~--------~~~~~~~~~dva~~i~~~~~ 246 (272)
T 1yb1_A 195 TDELAALQITGVKTTCLCPNFVNTGFIK---------NP---S--------T--------SLGPTLEPEEVVNRLMHGIL 246 (272)
T ss_dssp HHHHHHTTCTTEEEEEEEETHHHHCSTT---------CT---H--------H--------HHCCCCCHHHHHHHHHHHHH
T ss_pred HHHHHHhCCCCeEEEEEeCCcccCCccc---------cc---c--------c--------cccCCCCHHHHHHHHHHHHH
Confidence 5 1799999999999775310 00 0 0 01247899999999999886
Q ss_pred h
Q psy5825 492 K 492 (596)
Q Consensus 492 ~ 492 (596)
.
T Consensus 247 ~ 247 (272)
T 1yb1_A 247 T 247 (272)
T ss_dssp T
T ss_pred c
Confidence 4
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.11 E-value=5.4e-10 Score=112.68 Aligned_cols=154 Identities=17% Similarity=0.152 Sum_probs=101.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHH----HHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQA----TRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~G----T~~LL~~ 338 (596)
.++.++.+|++++. .+..+++ ++|+|||+||.... ...+..++.+|+.| +.+++.+
T Consensus 83 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~iD~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~ 156 (279)
T 1xg5_A 83 GTLIPYRCDLSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS 156 (279)
T ss_dssp SEEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEEecCCCHH------HHHHHHHHHHHhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 46889999999653 3555554 78999999997532 13456688999999 6667777
Q ss_pred HHhcCCC--ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 339 ATRCSQL--KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 339 a~~~~~v--krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
+.. .++ .+||++||+.+++.... + ....|+.||++.+.++
T Consensus 157 ~~~-~~~~~g~iv~isS~~~~~~~~~-------------------------------~------~~~~Y~~sK~a~~~~~ 198 (279)
T 1xg5_A 157 MKE-RNVDDGHIININSMSGHRVLPL-------------------------------S------VTHFYSATKYAVTALT 198 (279)
T ss_dssp HHH-TTCCSCEEEEECCGGGTSCCSC-------------------------------G------GGHHHHHHHHHHHHHH
T ss_pred HHh-cCCCCceEEEEcChhhcccCCC-------------------------------C------CCchhHHHHHHHHHHH
Confidence 766 344 79999999987642110 0 1246999999999888
Q ss_pred HHHh-------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHH
Q psy5825 417 EKYL-------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGV 489 (596)
Q Consensus 417 ~~~~-------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~ 489 (596)
..++ .++++++++||.|.++... .. +......+.. .. ....++.++|+|++++.+
T Consensus 199 ~~la~e~~~~~~~i~v~~v~Pg~v~t~~~~---~~---~~~~~~~~~~----~~--------~~~~~~~~~dvA~~i~~l 260 (279)
T 1xg5_A 199 EGLRQELREAQTHIRATCISPGVVETQFAF---KL---HDKDPEKAAA----TY--------EQMKCLKPEDVAEAVIYV 260 (279)
T ss_dssp HHHHHHHHHTTCCCEEEEEEESCBCSSHHH---HH---TTTCHHHHHH----HH--------C---CBCHHHHHHHHHHH
T ss_pred HHHHHHHhhcCCCeEEEEEecCcccchhhh---hh---cccChhHHhh----hc--------ccccCCCHHHHHHHHHHH
Confidence 7654 4799999999999765210 00 0000111100 00 112468899999999998
Q ss_pred HHh
Q psy5825 490 VWK 492 (596)
Q Consensus 490 ~~~ 492 (596)
+..
T Consensus 261 ~~~ 263 (279)
T 1xg5_A 261 LST 263 (279)
T ss_dssp HHS
T ss_pred hcC
Confidence 864
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=99.10 E-value=8.1e-10 Score=109.51 Aligned_cols=169 Identities=14% Similarity=0.125 Sum_probs=114.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+||...+. ..+..++++|+.|+.++++++..
T Consensus 52 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 125 (247)
T 3rwb_A 52 KKARAIAADISDPG------SVKALFAEIQALTGGIDILVNNASIVPFVAWDDVDLDHWRKIIDVNLTGTFIVTRAGTDQ 125 (247)
T ss_dssp TTEEECCCCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEcCCCCHH------HHHHHHHHHHHHCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 67899999999653 3555554 689999999976421 23556889999999999998543
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.....+||++||...+.... ....|+.||+..+.+++.
T Consensus 126 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~ 166 (247)
T 3rwb_A 126 MRAAGKAGRVISIASNTFFAGTP---------------------------------------NMAAYVAAKGGVIGFTRA 166 (247)
T ss_dssp HHHHTCCEEEEEECCTHHHHTCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCcEEEEECchhhccCCC---------------------------------------CchhhHHHHHHHHHHHHH
Confidence 22357999999987653210 124699999999988877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+++++++||.|..+..... +......+..... ....+...+|+|++++.++...
T Consensus 167 la~e~~~~gi~vn~v~PG~v~t~~~~~~---------~~~~~~~~~~~~~--------~~~r~~~pedva~~v~~L~s~~ 229 (247)
T 3rwb_A 167 LATELGKYNITANAVTPGLIESDGVKAS---------PHNEAFGFVEMLQ--------AMKGKGQPEHIADVVSFLASDD 229 (247)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCHHHHTS---------GGGGGHHHHHHHS--------SSCSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHhhhcCeEEEEEeeCcCcCcccccc---------ChhHHHHHHhccc--------ccCCCcCHHHHHHHHHHHhCcc
Confidence 65 689999999999976532110 0000001111000 1123567899999999888654
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|+++++.+|
T Consensus 230 ~~~----------------itG~~i~vdGG 243 (247)
T 3rwb_A 230 ARW----------------ITGQTLNVDAG 243 (247)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred ccC----------------CCCCEEEECCC
Confidence 321 36899999887
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=99.09 E-value=1.9e-09 Score=107.05 Aligned_cols=165 Identities=15% Similarity=0.111 Sum_probs=110.9
Q ss_pred CcEEEEEecc--CCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDI--SQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 277 ~rv~~v~GDl--~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a 339 (596)
.++.++.+|+ +++ +++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++
T Consensus 62 ~~~~~~~~D~~~~~~------~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~ 135 (252)
T 3f1l_A 62 RQPQWFILDLLTCTS------ENCQQLAQRIAVNYPRLDGVLHNAGLLGDVCPMSEQNPQVWQDVMQVNVNATFMLTQAL 135 (252)
T ss_dssp CCCEEEECCTTTCCH------HHHHHHHHHHHHHCSCCSEEEECCCCCCCCSCTTTCCHHHHHHHHHHHTHHHHHHHHHH
T ss_pred CCceEEEEecccCCH------HHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHH
Confidence 3788999999 543 34555544 68999999997421 1234568999999999999998
Q ss_pred Hh---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 340 TR---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 340 ~~---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
.. ..+..+||++||...+.... ....|+.||++.+.++
T Consensus 136 ~~~m~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~l~ 176 (252)
T 3f1l_A 136 LPLLLKSDAGSLVFTSSSVGRQGRA---------------------------------------NWGAYAASKFATEGMM 176 (252)
T ss_dssp HHHHHTSSSCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHHHHCCCCEEEEECChhhccCCC---------------------------------------CCchhHHHHHHHHHHH
Confidence 53 13567999999987653210 1246999999999999
Q ss_pred HHHh----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 417 EKYL----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 417 ~~~~----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+.++ ..+.+..+.||.|..+ +...... ......+...+|+|.+++.++..
T Consensus 177 ~~la~e~~~~irvn~v~PG~v~t~-----------------~~~~~~~---------~~~~~~~~~p~dva~~~~~L~s~ 230 (252)
T 3f1l_A 177 QVLADEYQQRLRVNCINPGGTRTA-----------------MRASAFP---------TEDPQKLKTPADIMPLYLWLMGD 230 (252)
T ss_dssp HHHHHHTTTTCEEEEEECCSBSSH-----------------HHHHHCT---------TCCGGGSBCTGGGHHHHHHHHSG
T ss_pred HHHHHHhcCCcEEEEEecCcccCc-----------------hhhhhCC---------ccchhccCCHHHHHHHHHHHcCc
Confidence 8876 3388888888887432 1111110 11123467789999999988865
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccH
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITW 530 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~ 530 (596)
.... ..|++|++.+| ...++
T Consensus 231 ~~~~----------------itG~~i~vdgG--~~~~~ 250 (252)
T 3f1l_A 231 DSRR----------------KTGMTFDAQPG--RKPGI 250 (252)
T ss_dssp GGTT----------------CCSCEEESSCC-------
T ss_pred cccC----------------CCCCEEEeCCC--cCCCC
Confidence 4321 36899999988 44443
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=99.09 E-value=7.7e-09 Score=104.75 Aligned_cols=170 Identities=10% Similarity=0.047 Sum_probs=113.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh---------h--------hhHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF---------D--------ELIQDAFTLNIQAT 332 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~---------~--------~~~~~~~~~NV~GT 332 (596)
.++.++.+|++++.. ..+.+..+++ .+|+|||+||.... . ..+...+.+|+.|+
T Consensus 74 ~~~~~~~~Dv~~~~~--~~~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~ 151 (288)
T 2x9g_A 74 NTAVVCQADLTNSNV--LPASCEEIINSCFRAFGRCDVLVNNASAFYPTPLVQGDHEDNSNGKTVETQVAELIGTNAIAP 151 (288)
T ss_dssp TCEEEEECCCSCSTT--HHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCSCCC--------CCHHHHHHHHHHHHTHHH
T ss_pred CceEEEEeecCCccC--CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCccccccchhcccccCCHHHHHHHHHHhhHHH
Confidence 578999999997321 1233454443 68999999997531 1 12345789999999
Q ss_pred HHHHHHHHhc---CC------CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCc
Q psy5825 333 RELLDLATRC---SQ------LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNN 403 (596)
Q Consensus 333 ~~LL~~a~~~---~~------vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~ 403 (596)
.+|++++... .+ ..+||++||.+++.... ...
T Consensus 152 ~~l~~~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~ 192 (288)
T 2x9g_A 152 FLLTMSFAQRQKGTNPNCTSSNLSIVNLCDAMVDQPCM---------------------------------------AFS 192 (288)
T ss_dssp HHHHHHHHHHC--------CCCEEEEEECCTTTTSCCT---------------------------------------TCH
T ss_pred HHHHHHHHHHHhhcCCCCCCCCeEEEEEecccccCCCC---------------------------------------CCc
Confidence 9999998752 12 46899999987754210 124
Q ss_pred hHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCcccc-c
Q psy5825 404 SYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDL-I 477 (596)
Q Consensus 404 ~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~-i 477 (596)
.|+.||+..+.+++.++ .|+.+++++||.|+++. . .. ......+... ++. .-+ .
T Consensus 193 ~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~t~~-~---------~~-~~~~~~~~~~----~p~-----~r~~~ 252 (288)
T 2x9g_A 193 LYNMGKHALVGLTQSAALELAPYGIRVNGVAPGVSLLPV-A---------MG-EEEKDKWRRK----VPL-----GRREA 252 (288)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSCSCCT-T---------SC-HHHHHHHHHT----CTT-----TSSCC
T ss_pred hHHHHHHHHHHHHHHHHHHhhccCeEEEEEEeccccCcc-c---------cC-hHHHHHHHhh----CCC-----CCCCC
Confidence 69999999988887765 58999999999998863 1 01 1111111111 111 124 6
Q ss_pred cHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 478 PVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 478 pVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..+++|++++.++...... ..|.++++.+|
T Consensus 253 ~pedvA~~v~~l~s~~~~~----------------itG~~i~vdGG 282 (288)
T 2x9g_A 253 SAEQIADAVIFLVSGSAQY----------------ITGSIIKVDGG 282 (288)
T ss_dssp CHHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCccccC----------------ccCCEEEECcc
Confidence 8899999999998643321 36889998877
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=99.09 E-value=2.5e-09 Score=106.85 Aligned_cols=146 Identities=13% Similarity=0.125 Sum_probs=100.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCC----h----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLR----F----DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~----~----~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. .+..+++ .+|+|||+||... + ...+..++++|+.|+.+|++++..
T Consensus 78 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~ 151 (262)
T 3rkr_A 78 GEAESHACDLSHSD------AIAAFATGVLAAHGRCDVLVNNAGVGWFGGPLHTMKPAEWDALIAVNLKAPYLLLRAFAP 151 (262)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCSSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CceeEEEecCCCHH------HHHHHHHHHHHhcCCCCEEEECCCccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57899999999654 3555544 4899999999732 1 123456889999999999998754
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||++.+.... ....|+.||++.+.+++.
T Consensus 152 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~ 192 (262)
T 3rkr_A 152 AMIAAKRGHIINISSLAGKNPVA---------------------------------------DGAAYTASKWGLNGLMTS 192 (262)
T ss_dssp HHHHTTCCEEEEECSSCSSCCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCceEEEEechhhcCCCC---------------------------------------CCchHHHHHHHHHHHHHH
Confidence 1 3567999999987654210 124699999999999877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
++ .|+.+++++||.|..+... .... ......++..+|||++++.++...
T Consensus 193 la~e~~~~gi~v~~v~PG~v~t~~~~-----------------~~~~---------~~~~~~~~~p~dvA~~v~~l~s~~ 246 (262)
T 3rkr_A 193 AAEELRQHQVRVSLVAPGSVRTEFGV-----------------GLSA---------KKSALGAIEPDDIADVVALLATQA 246 (262)
T ss_dssp HHHHHGGGTCEEEEEEECCC------------------------------------------CCCHHHHHHHHHHHHTCC
T ss_pred HHHHhhhcCcEEEEEecCCCcCCccc-----------------cccc---------ccccccCCCHHHHHHHHHHHhcCc
Confidence 65 6899999999998554210 0000 011234678999999999988643
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.08 E-value=2.8e-09 Score=105.46 Aligned_cols=165 Identities=10% Similarity=0.012 Sum_probs=113.4
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc--
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC-- 342 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~-- 342 (596)
+.++.+|++++. .+..+++ .+|+|||+||.... ...+...+.+|+.|+.++++++...
T Consensus 51 ~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lvn~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~ 124 (245)
T 1uls_A 51 AHPVVMDVADPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAMR 124 (245)
T ss_dssp CEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred CEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH
Confidence 788899999653 3555544 48999999997542 1235568899999999999988652
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+..+||++||.+.++.. ....|+.||+..+.+.+.++
T Consensus 125 ~~~~g~iv~isS~~~~~~~----------------------------------------~~~~Y~asK~a~~~~~~~la~ 164 (245)
T 1uls_A 125 EKNPGSIVLTASRVYLGNL----------------------------------------GQANYAASMAGVVGLTRTLAL 164 (245)
T ss_dssp TTCCEEEEEECCGGGGCCT----------------------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEEccchhcCCC----------------------------------------CchhHHHHHHHHHHHHHHHHH
Confidence 356799999998843310 12469999999998887765
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+++++++||.|..+... .+ ...+...+.. . ++. ..++..+|+|++++.++......
T Consensus 165 e~~~~gi~v~~v~PG~v~t~~~~-------~~--~~~~~~~~~~-~---~p~-----~~~~~~~dvA~~v~~l~s~~~~~ 226 (245)
T 1uls_A 165 ELGRWGIRVNTLAPGFIETRMTA-------KV--PEKVREKAIA-A---TPL-----GRAGKPLEVAYAALFLLSDESSF 226 (245)
T ss_dssp HHGGGTEEEEEEEECSBCCTTTS-------SS--CHHHHHHHHH-T---CTT-----CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHhHhCeEEEEEEeCcCcCcchh-------hc--CHHHHHHHHh-h---CCC-----CCCcCHHHHHHHHHHHhCchhcC
Confidence 6899999999999765321 11 1122111111 1 111 13788999999999988643321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|++|++.++
T Consensus 227 ----------------~tG~~~~vdgG 237 (245)
T 1uls_A 227 ----------------ITGQVLFVDGG 237 (245)
T ss_dssp ----------------CCSCEEEESTT
T ss_pred ----------------CcCCEEEECCC
Confidence 36889999887
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=99.06 E-value=9.1e-09 Score=104.50 Aligned_cols=173 Identities=13% Similarity=0.065 Sum_probs=115.0
Q ss_pred CcEEEEEeccCCCCC-------CCC----HHHHHHHhc-------cccEEEEcCccCCh---------------------
Q psy5825 277 RKVHIISGDISQPSL-------GIS----SHDQQFIQH-------HIHVIIHAAASLRF--------------------- 317 (596)
Q Consensus 277 ~rv~~v~GDl~~~~l-------GL~----~~~~~~l~~-------~vd~ViH~AA~v~~--------------------- 317 (596)
.++.++.+||+++.. |.. ...+..+++ .+|+|||+||....
T Consensus 60 ~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~ 139 (291)
T 1e7w_A 60 NSAITVQADLSNVATAPVSGADGSAPVTLFTRCAELVAACYTHWGRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAM 139 (291)
T ss_dssp TCEEEEECCCSSSCBCCCC----CCCBCHHHHHHHHHHHHHHHHSCCCEEEECCCCCCCCCCCC-------------HHH
T ss_pred CeeEEEEeecCCcccccccccccccccchHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCChhhcCcccccccccccccc
Confidence 578999999998760 000 002444443 78999999997532
Q ss_pred hhhHHHHHHHHHHHHHHHHHHHHhc---CC------CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHH
Q psy5825 318 DELIQDAFTLNIQATRELLDLATRC---SQ------LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEE 388 (596)
Q Consensus 318 ~~~~~~~~~~NV~GT~~LL~~a~~~---~~------vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~ 388 (596)
...+..++.+|+.|+.+|++++... .+ ..+||++||+..+....
T Consensus 140 ~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~~~~~~~g~Iv~isS~~~~~~~~--------------------------- 192 (291)
T 1e7w_A 140 ETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMVDAMTNQPLL--------------------------- 192 (291)
T ss_dssp HHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEECCTTTTSCCT---------------------------
T ss_pred HHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCCCCcEEEEEechhhcCCCC---------------------------
Confidence 2334568899999999999998641 23 57999999987654210
Q ss_pred HHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc
Q psy5825 389 LEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI 463 (596)
Q Consensus 389 ~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~ 463 (596)
....|+.||+..+.+.+.++ .|+.+++++||.|..+. . + ...+...+.. .
T Consensus 193 ------------~~~~Y~asKaa~~~l~~~la~e~~~~gI~vn~v~PG~v~T~~--------~-~--~~~~~~~~~~-~- 247 (291)
T 1e7w_A 193 ------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNGVGPGLSVLVD--------D-M--PPAVWEGHRS-K- 247 (291)
T ss_dssp ------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCCGG--------G-S--CHHHHHHHHT-T-
T ss_pred ------------CCchhHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCccCCc--------c-C--CHHHHHHHHh-h-
Confidence 12469999999999987765 58999999999985532 1 1 1122111111 1
Q ss_pred eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 464 HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 464 ~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.+. . .-+...+++|++++.++...... ..|.++++.+|
T Consensus 248 --~p~---~-~r~~~pedvA~~v~~l~s~~~~~----------------itG~~i~vdGG 285 (291)
T 1e7w_A 248 --VPL---Y-QRDSSAAEVSDVVIFLCSSKAKY----------------ITGTCVKVDGG 285 (291)
T ss_dssp --CTT---T-TSCBCHHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred --CCC---C-CCCCCHHHHHHHHHHHhCCcccC----------------ccCcEEEECCC
Confidence 111 0 03678999999999988643321 36889998887
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=99.06 E-value=7.1e-09 Score=102.89 Aligned_cols=156 Identities=8% Similarity=0.023 Sum_probs=107.9
Q ss_pred EEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHhc-CC
Q psy5825 281 IISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATRC-SQ 344 (596)
Q Consensus 281 ~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~~-~~ 344 (596)
.+..|+++ .+++..+++ .+|+|||+||.... ...+...+++|+.|+.+|++++... ..
T Consensus 63 ~~~~d~~d------~~~v~~~~~~~~~~~g~iD~li~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 136 (251)
T 3orf_A 63 SFTIKDSG------EEEIKSVIEKINSKSIKVDTFVCAAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQ 136 (251)
T ss_dssp EEECSCSS------HHHHHHHHHHHHTTTCCEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEE
T ss_pred ceEEEeCC------HHHHHHHHHHHHHHcCCCCEEEECCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhcc
Confidence 45566554 344665554 46999999996421 2334568899999999999999862 12
Q ss_pred CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----
Q psy5825 345 LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---- 420 (596)
Q Consensus 345 vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---- 420 (596)
..+||++||.+++.... ....|+.||++.+.+++.++
T Consensus 137 ~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sKaa~~~~~~~la~e~~ 177 (251)
T 3orf_A 137 GGLFVLTGASAALNRTS---------------------------------------GMIAYGATKAATHHIIKDLASENG 177 (251)
T ss_dssp EEEEEEECCGGGGSCCT---------------------------------------TBHHHHHHHHHHHHHHHHHTSTTS
T ss_pred CCEEEEEechhhccCCC---------------------------------------CCchhHHHHHHHHHHHHHHHHHhc
Confidence 24899999988654210 22469999999999998876
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh-hhcc
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK-TALD 496 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~-~~~~ 496 (596)
.|+.+++++||.|.++. ..... .......+++++|+|++++.++.. ....
T Consensus 178 ~~~~gi~v~~v~PG~v~t~~-----------------~~~~~---------~~~~~~~~~~~~dva~~i~~l~~~~~~~~ 231 (251)
T 3orf_A 178 GLPAGSTSLGILPVTLDTPT-----------------NRKYM---------SDANFDDWTPLSEVAEKLFEWSTNSDSRP 231 (251)
T ss_dssp SSCTTCEEEEEEESCBCCHH-----------------HHHHC---------TTSCGGGSBCHHHHHHHHHHHHHCGGGCC
T ss_pred ccCCCcEEEEEecCcCcCcc-----------------hhhhc---------ccccccccCCHHHHHHHHHHHhcCccccC
Confidence 26889999999885531 11111 112234688999999999999876 3221
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|+++++.++
T Consensus 232 ----------------~tG~~i~v~~g 242 (251)
T 3orf_A 232 ----------------TNGSLVKFETK 242 (251)
T ss_dssp ----------------CTTCEEEEEEE
T ss_pred ----------------CcceEEEEecC
Confidence 36889999876
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=99.06 E-value=1.8e-09 Score=107.41 Aligned_cols=154 Identities=10% Similarity=0.021 Sum_probs=97.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 56 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~ 129 (252)
T 3h7a_A 56 GRIVARSLDARNED------EVTAFLNAADAHAPLEVTIFNVGANVNFPILETTDRVFRKVWEMACWAGFVSGRESARLM 129 (252)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHSCEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEEECcCCCHH------HHHHHHHHHHhhCCceEEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 57999999999653 4666655 67999999997542 1234568899999999999987531
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..+||++||...+.... ....|+.||++.+.+.+.++
T Consensus 130 ~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~la 170 (252)
T 3h7a_A 130 LAHGQGKIFFTGATASLRGGS---------------------------------------GFAAFASAKFGLRAVAQSMA 170 (252)
T ss_dssp HHHTCEEEEEEEEGGGTCCCT---------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCcEEEEECCHHHcCCCC---------------------------------------CCccHHHHHHHHHHHHHHHH
Confidence 2456999999987653210 12469999999999888765
Q ss_pred -----cCCCE-EEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 421 -----YKLPL-AMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 421 -----~gl~~-~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
.|+.+ +++.||.|..+..... . ...... + ....... ++..+|+|++++.++....
T Consensus 171 ~e~~~~gi~v~n~v~PG~v~T~~~~~~-------~--~~~~~~--------~-~~~~~~~-~~~pedvA~~~~~l~s~~~ 231 (252)
T 3h7a_A 171 RELMPKNIHVAHLIIDSGVDTAWVRER-------R--EQMFGK--------D-ALANPDL-LMPPAAVAGAYWQLYQQPK 231 (252)
T ss_dssp HHHGGGTEEEEEEEEC----------------------------------------------CCHHHHHHHHHHHHHCCG
T ss_pred HHhhhcCCEEEEEecCCccCChhhhcc-------c--hhhhhh--------h-hhcCCcc-CCCHHHHHHHHHHHHhCch
Confidence 58899 8999999866432110 0 000000 0 0011122 8899999999999987543
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=99.05 E-value=3.5e-10 Score=111.87 Aligned_cols=155 Identities=15% Similarity=0.100 Sum_probs=90.3
Q ss_pred CcEEEEEeccCCCCCC-CCHHHHHHHhccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc--CCCc
Q psy5825 277 RKVHIISGDISQPSLG-ISSHDQQFIQHHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC--SQLK 346 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lG-L~~~~~~~l~~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~--~~vk 346 (596)
.++.++.+|+++...- .....+ .-+..+|+|||+||..... ..+..++++|+.|+.+|++++... ....
T Consensus 48 ~~~~~~~~D~~~~~~~~~~~~~~-~~~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~g 126 (245)
T 3e9n_A 48 EGVEPIESDIVKEVLEEGGVDKL-KNLDHVDTLVHAAAVARDTTIEAGSVAEWHAHLDLNVIVPAELSRQLLPALRAASG 126 (245)
T ss_dssp TTEEEEECCHHHHHHTSSSCGGG-TTCSCCSEEEECC----------CHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred cCCcceecccchHHHHHHHHHHH-HhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCC
Confidence 4688999999864210 000001 1124789999999976422 234567899999999988887531 1126
Q ss_pred eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----c
Q psy5825 347 AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----Y 421 (596)
Q Consensus 347 rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~ 421 (596)
+||++||.+++.... ....|+.||++.+.+++.++ .
T Consensus 127 ~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~ 167 (245)
T 3e9n_A 127 CVIYINSGAGNGPHP---------------------------------------GNTIYAASKHALRGLADAFRKEEANN 167 (245)
T ss_dssp EEEEEC-------------------------------------------------CHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred eEEEEcCcccccCCC---------------------------------------CchHHHHHHHHHHHHHHHHHHHhhhc
Confidence 899999988765210 12469999999999998765 6
Q ss_pred CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 422 KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 422 gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
|+.+++++||.|.++..... ..... .......++.++|+|++++.++...
T Consensus 168 gi~v~~v~PG~v~t~~~~~~-------------~~~~~---------~~~~~~~~~~p~dvA~~i~~l~~~~ 217 (245)
T 3e9n_A 168 GIRVSTVSPGPTNTPMLQGL-------------MDSQG---------TNFRPEIYIEPKEIANAIRFVIDAG 217 (245)
T ss_dssp TCEEEEEEECCC--------------------------------------CCGGGSCHHHHHHHHHHHHTSC
T ss_pred CeEEEEEecCCccCchhhhh-------------hhhhh---------cccccccCCCHHHHHHHHHHHHcCC
Confidence 89999999999977532110 00000 0011235789999999999998653
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=99.05 E-value=3.6e-09 Score=105.74 Aligned_cols=170 Identities=9% Similarity=-0.031 Sum_probs=114.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||..... ..+...+++|+.|+.+|++++...
T Consensus 73 ~~~~~~~~Dl~~~~------~v~~~~~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 146 (267)
T 3gdg_A 73 IKAKAYKCQVDSYE------SCEKLVKDVVADFGQIDAFIANAGATADSGILDGSVEAWNHVVQVDLNGTFHCAKAVGHH 146 (267)
T ss_dssp CCEECCBCCTTCHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCSCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceeEEecCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhcchHHHHHHHHHHHH
Confidence 67999999999653 3555554 569999999975421 335568999999999999988431
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||.+.+.... + . ....|+.||++.+.+++.+
T Consensus 147 ~~~~~~g~iv~isS~~~~~~~~-------~-----------------------------~-~~~~Y~~sK~a~~~~~~~l 189 (267)
T 3gdg_A 147 FKERGTGSLVITASMSGHIANF-------P-----------------------------Q-EQTSYNVAKAGCIHMARSL 189 (267)
T ss_dssp HHHHTCCEEEEECCGGGTSCCS-------S-----------------------------S-CCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCceEEEEccccccccCC-------C-----------------------------C-CCCcchHHHHHHHHHHHHH
Confidence 2457999999987643210 0 0 1246999999999999887
Q ss_pred h----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 420 L----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 420 ~----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
+ ..+.++++.||.|..+... . .+......+.. ......+..++|+|++++.++.....
T Consensus 190 a~e~~~~i~v~~v~PG~v~t~~~~-------~--~~~~~~~~~~~---------~~~~~r~~~~~dva~~~~~l~s~~~~ 251 (267)
T 3gdg_A 190 ANEWRDFARVNSISPGYIDTGLSD-------F--VPKETQQLWHS---------MIPMGRDGLAKELKGAYVYFASDAST 251 (267)
T ss_dssp HHHTTTTCEEEEEEECCEECSCGG-------G--SCHHHHHHHHT---------TSTTSSCEETHHHHHHHHHHHSTTCT
T ss_pred HHHhccCcEEEEEECCccccchhh-------h--CCHHHHHHHHh---------cCCCCCCcCHHHHHhHhheeecCccc
Confidence 6 3378999999988654221 0 11122111111 11223567889999999988854322
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. ..|+++++.+|
T Consensus 252 ~----------------itG~~i~vdgG 263 (267)
T 3gdg_A 252 Y----------------TTGADLLIDGG 263 (267)
T ss_dssp T----------------CCSCEEEESTT
T ss_pred c----------------ccCCEEEECCc
Confidence 1 36899999887
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=99.04 E-value=2.6e-09 Score=107.57 Aligned_cols=154 Identities=12% Similarity=0.081 Sum_probs=100.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+||+++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 74 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~ 147 (272)
T 4dyv_A 74 DDALCVPTDVTDPD------SVRALFTATVEKFGRVDVLFNNAGTGAPAIPMEDLTFAQWKQVVDTNLTGPFLCTQEAFR 147 (272)
T ss_dssp SCCEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCeEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHH
Confidence 57899999999654 4555554 78999999997532 123456899999999999988764
Q ss_pred c---CC--CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHH
Q psy5825 342 C---SQ--LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416 (596)
Q Consensus 342 ~---~~--vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv 416 (596)
. .+ ..+||++||++.+.... ....|+.||++.+.++
T Consensus 148 ~~~~~~~~~g~IV~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~ 188 (272)
T 4dyv_A 148 VMKAQEPRGGRIINNGSISATSPRP---------------------------------------YSAPYTATKHAITGLT 188 (272)
T ss_dssp HHHHSSSCCEEEEEECCSSTTSCCT---------------------------------------TCHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCcEEEEECchhhcCCCC---------------------------------------CchHHHHHHHHHHHHH
Confidence 2 11 46999999987654210 2246999999999998
Q ss_pred HHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 417 EKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 417 ~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
+.++ .|+.+.+++||.|..+..... . ... ... ... .....++.++|+|++++.++.
T Consensus 189 ~~la~e~~~~gI~vn~v~PG~v~T~~~~~~-------~--~~~-~~~----~~~-----~~~~~~~~pedvA~~v~fL~s 249 (272)
T 4dyv_A 189 KSTSLDGRVHDIACGQIDIGNADTPMAQKM-------K--AGV-PQA----DLS-----IKVEPVMDVAHVASAVVYMAS 249 (272)
T ss_dssp HHHHHHHGGGTEEEEEEEEEECC-------------------------------------------CHHHHHHHHHHHHH
T ss_pred HHHHHHhCccCEEEEEEEECcccChhhhhh-------c--ccc-hhh----hhc-----ccccCCCCHHHHHHHHHHHhC
Confidence 8765 689999999999976532110 0 000 000 000 112247899999999999987
Q ss_pred hhh
Q psy5825 492 KTA 494 (596)
Q Consensus 492 ~~~ 494 (596)
.+.
T Consensus 250 ~~~ 252 (272)
T 4dyv_A 250 LPL 252 (272)
T ss_dssp SCT
T ss_pred CCC
Confidence 653
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=99.03 E-value=1.4e-09 Score=108.78 Aligned_cols=115 Identities=11% Similarity=0.137 Sum_probs=85.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccC-C---h----hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASL-R---F----DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v-~---~----~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.. . + ...+...+.+|+.|+.++++++..
T Consensus 56 ~~~~~~~~D~~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~ 129 (262)
T 1zem_A 56 VEARSYVCDVTSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR 129 (262)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 46899999999653 3544443 689999999975 2 1 123466889999999999999865
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+..+||++||...+.... ....|+.||+..+.+.+.
T Consensus 130 ~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~ 170 (262)
T 1zem_A 130 QMITQNYGRIVNTASMAGVKGPP---------------------------------------NMAAYGTSKGAIIALTET 170 (262)
T ss_dssp HHHHHTCEEEEEECCHHHHSCCT---------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred HHHhcCCcEEEEEcchhhccCCC---------------------------------------CCchHHHHHHHHHHHHHH
Confidence 2 2457999999987654210 124699999998888876
Q ss_pred Hh-----cCCCEEEecCCccccC
Q psy5825 419 YL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~ 436 (596)
++ .|+.+++++||.|..+
T Consensus 171 la~e~~~~gi~vn~v~PG~v~t~ 193 (262)
T 1zem_A 171 AALDLAPYNIRVNAISPGYMGPG 193 (262)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSS
T ss_pred HHHHHHhhCeEEEEEecCCcCcc
Confidence 54 6899999999998654
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=99.03 E-value=3.2e-09 Score=105.18 Aligned_cols=153 Identities=10% Similarity=0.063 Sum_probs=104.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ ++|+|||+||..... ..+...+.+|+.|+.++++++...
T Consensus 56 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 129 (247)
T 2jah_A 56 AKVHVLELDVADRQ------GVDAAVASTVEALGGLDILVNNAGIMLLGPVEDADTTDWTRMIDTNLLGLMYMTRAALPH 129 (247)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999653 3555543 689999999975321 234568899999999999998641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+ .+||++||.+.+.... ....|+.||+..+.+.+.+
T Consensus 130 ~~~~~-g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 169 (247)
T 2jah_A 130 LLRSK-GTVVQMSSIAGRVNVR---------------------------------------NAAVYQATKFGVNAFSETL 169 (247)
T ss_dssp HHHHT-CEEEEECCGGGTCCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHCC-CEEEEEccHHhcCCCC---------------------------------------CCcHHHHHHHHHHHHHHHH
Confidence 23 6999999987654210 1246999999999888765
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|+++++++||.|..+... . .. ... ....... .+ ..+.++..+|+|++++.++..
T Consensus 170 a~e~~~~gi~v~~v~PG~v~T~~~~---~----~~-~~~-~~~~~~~----~~----~~~~~~~pedvA~~v~~l~s~ 230 (247)
T 2jah_A 170 RQEVTERGVRVVVIEPGTTDTELRG---H----IT-HTA-TKEMYEQ----RI----SQIRKLQAQDIAEAVRYAVTA 230 (247)
T ss_dssp HHHHGGGTCEEEEEEECSBSSSGGG---G----CC-CHH-HHHHHHH----HT----TTSCCBCHHHHHHHHHHHHHS
T ss_pred HHHhcccCcEEEEEECCCCCCcchh---c----cc-chh-hHHHHHh----cc----cccCCCCHHHHHHHHHHHhCC
Confidence 4 6899999999999775321 1 11 111 1111111 11 112258999999999998864
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=99.02 E-value=3.1e-09 Score=107.01 Aligned_cols=114 Identities=13% Similarity=0.029 Sum_probs=85.3
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhcc-------ccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHH-------IHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~-------vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
++.++.+|++++ +.+..+++. +|+|||+||.... ...+..++++|+.|+.++++++...
T Consensus 70 ~~~~~~~Dv~d~------~~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 143 (272)
T 2nwq_A 70 RVLPLTLDVRDR------AAMSAAVDNLPEEFATLRGLINNAGLALGTDPAQSCDLDDWDTMVDTNIKGLLYSTRLLLPR 143 (272)
T ss_dssp CEEEEECCTTCH------HHHHHHHHTCCGGGSSCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cEEEEEcCCCCH------HHHHHHHHHHHHHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 789999999965 346776654 5999999997532 1345668999999998888877531
Q ss_pred ---CCCc-eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 343 ---SQLK-AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 343 ---~~vk-rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.+.. +||++||...+.... ....|+.||+..+.+++.
T Consensus 144 m~~~~~g~~IV~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~ 184 (272)
T 2nwq_A 144 LIAHGAGASIVNLGSVAGKWPYP---------------------------------------GSHVYGGTKAFVEQFSLN 184 (272)
T ss_dssp HHHHCTTCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCcEEEEeCCchhccCCC---------------------------------------CCchHHHHHHHHHHHHHH
Confidence 2445 999999987653210 124699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccC
Q psy5825 419 YL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~ 436 (596)
++ .|+++++++||.|.++
T Consensus 185 la~el~~~gIrvn~v~PG~v~T~ 207 (272)
T 2nwq_A 185 LRCDLQGTGVRVTNLEPGLCESE 207 (272)
T ss_dssp HHTTCTTSCCEEEEEEECSBC--
T ss_pred HHHHhCccCeEEEEEEcCCCcCc
Confidence 76 5899999999999765
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=99.01 E-value=4.3e-09 Score=106.58 Aligned_cols=149 Identities=13% Similarity=0.049 Sum_probs=103.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||..... ..+...+++|+.|+.++++++...
T Consensus 65 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 138 (285)
T 3sc4_A 65 GQALPIVGDIRDGD------AVAAAVAKTVEQFGGIDICVNNASAINLGSIEEVPLKRFDLMNGIQVRGTYAVSQSCIPH 138 (285)
T ss_dssp SEEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57999999999653 3555554 789999999975321 234568899999999999999762
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... . ....|+.||++.+.+++.+
T Consensus 139 m~~~~~g~iv~isS~~~~~~~~-------------------------------------~-~~~~Y~asKaal~~~~~~l 180 (285)
T 3sc4_A 139 MKGRDNPHILTLSPPIRLEPKW-------------------------------------L-RPTPYMMAKYGMTLCALGI 180 (285)
T ss_dssp TTTSSSCEEEECCCCCCCSGGG-------------------------------------S-CSHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEECChhhccCCC-------------------------------------C-CCchHHHHHHHHHHHHHHH
Confidence 2456999999987543210 0 1256999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+ .|+.++++.||.+.. +.++...... ......+...+++|++++.++...
T Consensus 181 a~e~~~~gI~vn~v~PG~~v~----------------t~~~~~~~~~--------~~~~~r~~~pedvA~~~~~l~s~~ 235 (285)
T 3sc4_A 181 AEELRDAGIASNTLWPRTTVA----------------TAAVQNLLGG--------DEAMARSRKPEVYADAAYVVLNKP 235 (285)
T ss_dssp HHHTGGGTCEEEEEECSSCBC----------------CHHHHHHHTS--------CCCCTTCBCTHHHHHHHHHHHTSC
T ss_pred HHHhcccCcEEEEEeCCCccc----------------cHHHHhhccc--------cccccCCCCHHHHHHHHHHHhCCc
Confidence 5 689999999984322 1122222211 111234667899999999988653
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=98.99 E-value=9.7e-10 Score=108.38 Aligned_cols=159 Identities=8% Similarity=-0.010 Sum_probs=108.1
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc---------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH---------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~---------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.+.++.+|++++. .+..+++ ++|+|||+||.... ...+...+++|+.|+.++++++.
T Consensus 47 ~~~~~~~D~~~~~------~v~~~~~~~~~~~~~g~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~ 120 (241)
T 1dhr_A 47 ASVIVKMTDSFTE------QADQVTAEVGKLLGDQKVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLAT 120 (241)
T ss_dssp EEEECCCCSCHHH------HHHHHHHHHHHHHTTCCEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcEEEEcCCCCHH------HHHHHHHHHHHHhCCCCCCEEEEcccccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHH
Confidence 4567778887543 3444443 78999999997531 12345688999999999999997
Q ss_pred hc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 341 RC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 341 ~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.. ....+||++||.+.+.... ....|+.||+..+.+++.+
T Consensus 121 ~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l 161 (241)
T 1dhr_A 121 KHLKEGGLLTLAGAKAALDGTP---------------------------------------GMIGYGMAKGAVHQLCQSL 161 (241)
T ss_dssp HHEEEEEEEEEECCGGGGSCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HhhccCCEEEEECCHHHccCCC---------------------------------------CchHHHHHHHHHHHHHHHH
Confidence 62 1125899999988764210 1246999999999999887
Q ss_pred h-------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|+.+++++||.|-.+ +...... ......+++.+|+|++++.++..
T Consensus 162 a~e~~~~~~gi~v~~v~PG~v~T~-----------------~~~~~~~---------~~~~~~~~~~~~vA~~v~~l~~~ 215 (241)
T 1dhr_A 162 AGKNSGMPSGAAAIAVLPVTLDTP-----------------MNRKSMP---------EADFSSWTPLEFLVETFHDWITG 215 (241)
T ss_dssp TSTTSSCCTTCEEEEEEESCEECH-----------------HHHHHST---------TSCGGGSEEHHHHHHHHHHHHTT
T ss_pred HHHhccCCCCeEEEEEecCcccCc-----------------cccccCc---------chhhccCCCHHHHHHHHHHHhcC
Confidence 6 2588999999988432 1111100 11223568899999999988854
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... ..|+++++.++
T Consensus 216 ~~~~----------------~~G~~~~v~g~ 230 (241)
T 1dhr_A 216 NKRP----------------NSGSLIQVVTT 230 (241)
T ss_dssp TTCC----------------CTTCEEEEEEE
T ss_pred CCcC----------------ccceEEEEeCC
Confidence 3221 35888888765
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.98 E-value=4.3e-09 Score=105.48 Aligned_cols=154 Identities=12% Similarity=0.100 Sum_probs=101.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+||+++. ++..+++ .+|+|||+||..... ..+..++++|+.|+.++++++...
T Consensus 53 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 126 (264)
T 3tfo_A 53 GTALAQVLDVTDRH------SVAAFAQAAVDTWGRIDVLVNNAGVMPLSPLAAVKVDEWERMIDVNIKGVLWGIGAVLPI 126 (264)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57889999999654 3555543 689999999976421 235568899999999999887541
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||++.+.... ....|+.||+..+.+.+.+
T Consensus 127 m~~~~~g~IV~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~l~~~l 167 (264)
T 3tfo_A 127 MEAQRSGQIINIGSIGALSVVP---------------------------------------TAAVYCATKFAVRAISDGL 167 (264)
T ss_dssp HHHHTCEEEEEECCGGGTCCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhCCCeEEEEEcCHHHcccCC---------------------------------------CChhHHHHHHHHHHHHHHH
Confidence 2457999999987654210 1246999999999999887
Q ss_pred h---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.++++.||.|..+..... ... .. .. .... ...-++..+|+|++++.++....
T Consensus 168 a~e~~gIrvn~v~PG~v~T~~~~~~-------~~~-~~-~~----~~~~------~~~~~~~pedvA~~v~~l~s~~~ 226 (264)
T 3tfo_A 168 RQESTNIRVTCVNPGVVESELAGTI-------THE-ET-MA----AMDT------YRAIALQPADIARAVRQVIEAPQ 226 (264)
T ss_dssp HHHCSSEEEEEEEECCC------------------------------------------CCCHHHHHHHHHHHHHSCT
T ss_pred HHhCCCCEEEEEecCCCcCcccccc-------cch-hH-HH----HHHh------hhccCCCHHHHHHHHHHHhcCCc
Confidence 7 589999999999866432110 000 00 00 0000 00114689999999999987543
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=98.98 E-value=7.9e-09 Score=104.55 Aligned_cols=144 Identities=13% Similarity=0.084 Sum_probs=100.2
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEc-CccCCh------hhhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHA-AASLRF------DELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~-AA~v~~------~~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
++.++.+|++++. .+..+++ ++|+|||+ |+.... ...+..++.+|+.|+.++++++...
T Consensus 79 ~~~~~~~Dl~d~~------~v~~~~~~~~~~~g~iD~li~naag~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 152 (286)
T 1xu9_A 79 SAHYIAGTMEDMT------FAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPML 152 (286)
T ss_dssp EEEEEECCTTCHH------HHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred ceEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCccCCCCccccCCHHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 6899999999653 3554443 78999999 454321 2234568899999999999988642
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+..+||++||.+.+.... ....|+.||++.+.++..+.
T Consensus 153 ~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asK~a~~~~~~~l~~ 193 (286)
T 1xu9_A 153 KQSNGSIVVVSSLAGKVAYP---------------------------------------MVAAYSASKFALDGFFSSIRK 193 (286)
T ss_dssp HHHTCEEEEEEEGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred HHCCCEEEEECCcccccCCC---------------------------------------CccHHHHHHHHHHHHHHHHHH
Confidence 1236999999987654210 22469999999999887654
Q ss_pred ------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 ------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 ------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++.+++++||.|..+ +......+ .....++++++||++++.++..
T Consensus 194 e~~~~~~~i~v~~v~Pg~v~t~-----------------~~~~~~~~---------~~~~~~~~~~~vA~~i~~~~~~ 245 (286)
T 1xu9_A 194 EYSVSRVNVSITLCVLGLIDTE-----------------TAMKAVSG---------IVHMQAAPKEECALEIIKGGAL 245 (286)
T ss_dssp HHHHHTCCCEEEEEEECCBCCH-----------------HHHHHSCG---------GGGGGCBCHHHHHHHHHHHHHT
T ss_pred HHhhcCCCeEEEEeecCccCCh-----------------hHHHhccc---------cccCCCCCHHHHHHHHHHHHhc
Confidence 4889999999988442 11111111 1124578999999999988864
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=98.97 E-value=1.1e-08 Score=101.66 Aligned_cols=156 Identities=10% Similarity=0.001 Sum_probs=101.8
Q ss_pred ccccEEEEcCccC-Ch-------hhhHHHHHHHHHHHHHHHHHHHHhc---CCCceEEEecCcccccCCccccccccCCC
Q psy5825 303 HHIHVIIHAAASL-RF-------DELIQDAFTLNIQATRELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPL 371 (596)
Q Consensus 303 ~~vd~ViH~AA~v-~~-------~~~~~~~~~~NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~ 371 (596)
..+|+|||+||.. .. ...+...+.+|+.|+.++++++... .+..+||++||...+....
T Consensus 71 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------- 140 (254)
T 1zmt_A 71 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK---------- 140 (254)
T ss_dssp SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT----------
T ss_pred CCCCEEEECCCcCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECCcccccCCC----------
Confidence 3789999999976 21 1234568899999999999988531 2457999999987654210
Q ss_pred CChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCC
Q psy5825 372 FSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSN 446 (596)
Q Consensus 372 ~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~ 446 (596)
....|+.||+..+.+++.++ .|+.+++++||.|+|+....+. ..+
T Consensus 141 -----------------------------~~~~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~~~~~~~~~-~T~ 190 (254)
T 1zmt_A 141 -----------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFY-PTE 190 (254)
T ss_dssp -----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSC-BHH
T ss_pred -----------------------------CchHHHHHHHHHHHHHHHHHHHhhhcCcEEEEEecCccccccccccC-CCc
Confidence 12469999999999988765 5899999999999886432100 000
Q ss_pred CCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 447 NLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 447 ~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.......+...+... .+ ...+...+|+|++++.++...... ..|++|++.++
T Consensus 191 ~~~~~~~~~~~~~~~----~p-----~~~~~~p~dvA~~v~~l~s~~~~~----------------~tG~~~~vdgG 242 (254)
T 1zmt_A 191 PWKTNPEHVAHVKKV----TA-----LQRLGTQKELGELVAFLASGSCDY----------------LTGQVFWLAGG 242 (254)
T ss_dssp HHTTCHHHHHHHHHH----SS-----SSSCBCHHHHHHHHHHHHTTSCGG----------------GTTCEEEESTT
T ss_pred ccccChHHHHHHhcc----CC-----CCCCcCHHHHHHHHHHHhCcccCC----------------ccCCEEEECCC
Confidence 000000111111110 11 113678999999999888643221 35889999887
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.97 E-value=1.5e-08 Score=103.06 Aligned_cols=152 Identities=16% Similarity=0.182 Sum_probs=88.4
Q ss_pred CcEEEEEeccCCC-CCCCCHHHHHHHh-------ccccEEEEcCccCCh-------------------------------
Q psy5825 277 RKVHIISGDISQP-SLGISSHDQQFIQ-------HHIHVIIHAAASLRF------------------------------- 317 (596)
Q Consensus 277 ~rv~~v~GDl~~~-~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~------------------------------- 317 (596)
.++.++.+||+++ .. +..++ ..+|+|||+||...+
T Consensus 62 ~~~~~~~~Dl~~~~~~------v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 135 (311)
T 3o26_A 62 ENVVFHQLDVTDPIAT------MSSLADFIKTHFGKLDILVNNAGVAGFSVDADRFKAMISDIGEDSEELVKIYEKPEAQ 135 (311)
T ss_dssp CSEEEEECCTTSCHHH------HHHHHHHHHHHHSSCCEEEECCCCCSCEECHHHHHHHHHHHCSSTTHHHHHTTSHHHH
T ss_pred CceEEEEccCCCcHHH------HHHHHHHHHHhCCCCCEEEECCcccccccccchhhhcccccccchhhcchhhcccchh
Confidence 5799999999986 32 33333 379999999998632
Q ss_pred ------hhhHHHHHHHHHHHHHHHHHHHHhc---CCCceEEEecCcccccCCcc---cccccc-CCCCChHHHHHHHhcC
Q psy5825 318 ------DELIQDAFTLNIQATRELLDLATRC---SQLKAILHVSTLYTHSYRED---IQEEFY-PPLFSYEDLAHVMQTT 384 (596)
Q Consensus 318 ------~~~~~~~~~~NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~---i~E~~~-~~~~~~~~~~~~~~~~ 384 (596)
...+...+.+|+.|+.+|++++... .+..+||++||...+..... ..+... ........+......+
T Consensus 136 ~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~~~~~IV~isS~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 215 (311)
T 3o26_A 136 ELMSETYELAEECLKINYNGVKSVTEVLIPLLQLSDSPRIVNVSSSTGSLKYVSNETALEILGDGDALTEERIDMVVNML 215 (311)
T ss_dssp TTEECCHHHHHHHHHHHTHHHHHHHHHHHHHHTTSSSCEEEEECCGGGSGGGCCCHHHHHHHHCGGGCCHHHHHHHHHHH
T ss_pred cccccchhhhhhheeeeeehHHHHHHHhhHhhccCCCCeEEEEecCCcccccccchhhhhhhccccccchhHHHHHHHHH
Confidence 1223456899999999999988641 34579999999876532110 000000 0000111100000000
Q ss_pred ChHHHHhhhhhhcCC--CCCchHHHHHHHHHHHHHHHh---cCCCEEEecCCccccC
Q psy5825 385 NQEELEILSSMLFGG--IYNNSYSFTKAIGESVVEKYL---YKLPLAMVRPSIVVST 436 (596)
Q Consensus 385 ~e~~~~~~~p~~~~~--~~~~~Y~~SK~~aE~lv~~~~---~gl~~~IlRp~~V~G~ 436 (596)
....... ... ... .....|+.||++.+.+++.++ .++.++++.||.|..+
T Consensus 216 ~~~~~~~-~~~-~~~~~~~~~~Y~~SK~a~~~~~~~la~e~~~i~v~~v~PG~v~T~ 270 (311)
T 3o26_A 216 LKDFKEN-LIE-TNGWPSFGAAYTTSKACLNAYTRVLANKIPKFQVNCVCPGLVKTE 270 (311)
T ss_dssp HHHHHTT-CTT-TTTCCSSCHHHHHHHHHHHHHHHHHHHHCTTSEEEEECCCSBCSG
T ss_pred Hhhhhcc-ccc-cccCcccchhhHHHHHHHHHHHHHHHhhcCCceEEEecCCceecC
Confidence 0000000 000 001 012579999999999998887 5789999999988553
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=98.96 E-value=5e-09 Score=113.17 Aligned_cols=167 Identities=11% Similarity=0.040 Sum_probs=109.6
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------c-ccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------H-IHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~-vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.+.++.+|+++... +..+++ + +|+|||+|+..... ..+...+.+|+.|+.+|++++...
T Consensus 260 ~~~~~~~Dvtd~~~------v~~~~~~~~~~~g~~id~lV~nAGv~~~~~~~~~~~~~~~~~~~~nv~g~~~l~~~~~~~ 333 (454)
T 3u0b_A 260 GGTALTLDVTADDA------VDKITAHVTEHHGGKVDILVNNAGITRDKLLANMDEKRWDAVIAVNLLAPQRLTEGLVGN 333 (454)
T ss_dssp TCEEEECCTTSTTH------HHHHHHHHHHHSTTCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHT
T ss_pred CCeEEEEecCCHHH------HHHHHHHHHHHcCCCceEEEECCcccCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 46789999998763 444432 3 99999999986421 235568899999999999999862
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
....+||++||++.+.... ....|+.||+..+.++..+
T Consensus 334 ~~~~~~g~iV~iSS~a~~~g~~---------------------------------------g~~~YaasKaal~~l~~~l 374 (454)
T 3u0b_A 334 GTIGEGGRVIGLSSMAGIAGNR---------------------------------------GQTNYATTKAGMIGLAEAL 374 (454)
T ss_dssp TSSCTTCEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred hhhcCCCEEEEEeChHhCCCCC---------------------------------------CCHHHHHHHHHHHHHHHHH
Confidence 1457999999987643210 1246999999776666554
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|++++++.||.|..+.....+ ........... ....+...+|+|++++.++....
T Consensus 375 a~e~~~~gI~vn~v~PG~v~T~~~~~~~----------~~~~~~~~~~~--------~l~r~g~pedvA~~v~fL~s~~a 436 (454)
T 3u0b_A 375 APVLADKGITINAVAPGFIETKMTEAIP----------LATREVGRRLN--------SLFQGGQPVDVAELIAYFASPAS 436 (454)
T ss_dssp HHHHHTTTCEEEEEEECSBCC--------------------CHHHHHSB--------TTSSCBCHHHHHHHHHHHHCGGG
T ss_pred HHHhhhcCcEEEEEEcCcccChhhhhcc----------hhhHHHHHhhc--------cccCCCCHHHHHHHHHHHhCCcc
Confidence 4 7899999999999765321110 00001111000 11234578899999998886433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.++
T Consensus 437 ~~----------------itG~~i~vdGG 449 (454)
T 3u0b_A 437 NA----------------VTGNTIRVCGQ 449 (454)
T ss_dssp TT----------------CCSCEEEESSS
T ss_pred CC----------------CCCcEEEECCc
Confidence 21 46889999877
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=98.96 E-value=4.6e-09 Score=106.15 Aligned_cols=178 Identities=13% Similarity=0.086 Sum_probs=112.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCChh------------hhHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRFD------------ELIQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~~------------~~~~~~~~~NV~GT~~LL~ 337 (596)
.++.++.+|++++. ++..+++ .+|+|||+||...+. ..+...+.+|+.|+.++++
T Consensus 51 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~ 124 (281)
T 3zv4_A 51 GNAVGVVGDVRSLQ------DQKRAAERCLAAFGKIDTLIPNAGIWDYSTALADLPEDKIDAAFDDIFHVNVKGYIHAVK 124 (281)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred CcEEEEEcCCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCccccccccCChhhhHHHHHHHHhhhhHHHHHHHH
Confidence 67899999999653 3444443 579999999975321 1255688999999999999
Q ss_pred HHHhc--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 338 LATRC--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 338 ~a~~~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
++... .+..+||++||...+.... ....|+.||++.+.+
T Consensus 125 ~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l 165 (281)
T 3zv4_A 125 ACLPALVSSRGSVVFTISNAGFYPNG---------------------------------------GGPLYTATKHAVVGL 165 (281)
T ss_dssp HHHHHHHHHTCEEEEECCGGGTSSSS---------------------------------------SCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCeEEEEecchhccCCC---------------------------------------CCchhHHHHHHHHHH
Confidence 98641 1225899999987653210 124699999999999
Q ss_pred HHHHh----cCCCEEEecCCccccCCCCCcc-ccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 416 VEKYL----YKLPLAMVRPSIVVSTWKEPIV-GWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 416 v~~~~----~gl~~~IlRp~~V~G~~~~p~~-G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
.+.++ +.+.+..+.||.|..+...+.. +..........+. ...... + ....+...+|+|++++.++
T Consensus 166 ~~~la~e~~~~Irvn~v~PG~v~T~~~~~~~~~~~~~~~~~~~~~-~~~~~~---~-----p~~r~~~pedvA~~v~fL~ 236 (281)
T 3zv4_A 166 VRQMAFELAPHVRVNGVAPGGMNTDLRGPSSLGLSEQSISSVPLA-DMLKSV---L-----PIGRMPALEEYTGAYVFFA 236 (281)
T ss_dssp HHHHHHHHTTTSEEEEEEECSSCC--CCCTTCC--------CCHH-HHHHHT---C-----TTSSCCCGGGGSHHHHHHH
T ss_pred HHHHHHHhcCCCEEEEEECCcCcCCcccccccccccccccchhHH-HHHHhc---C-----CCCCCCCHHHHHHHHHHhh
Confidence 98876 4499999999999775432110 0000000000011 111111 1 1224677889999999988
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...... +..|+++++.+|
T Consensus 237 s~~~~~---------------~itG~~i~vdGG 254 (281)
T 3zv4_A 237 TRGDSL---------------PATGALLNYDGG 254 (281)
T ss_dssp STTTST---------------TCSSCEEEESSS
T ss_pred cccccc---------------cccCcEEEECCC
Confidence 622221 136899999887
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=98.95 E-value=4.9e-09 Score=102.47 Aligned_cols=145 Identities=14% Similarity=0.211 Sum_probs=100.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccc----cEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc--C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHI----HVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC--S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~v----d~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~--~ 343 (596)
.++.++.+|++++ +.+..+++.+ |+|||+||.... ...+...+++|+.|+.+|++++... .
T Consensus 47 ~~~~~~~~D~~~~------~~v~~~~~~~~~~~d~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~ 120 (230)
T 3guy_A 47 NNVGYRARDLASH------QEVEQLFEQLDSIPSTVVHSAGSGYFGLLQEQDPEQIQTLIENNLSSAINVLRELVKRYKD 120 (230)
T ss_dssp SCCCEEECCTTCH------HHHHHHHHSCSSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred hccCeEeecCCCH------HHHHHHHHHHhhcCCEEEEeCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 5788999999964 4477777665 899999997532 1234568899999999999998752 1
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
...+||++||...+.... ....|+.||++.+.+++.++
T Consensus 121 ~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~la~e~ 161 (230)
T 3guy_A 121 QPVNVVMIMSTAAQQPKA---------------------------------------QESTYCAVKWAVKGLIESVRLEL 161 (230)
T ss_dssp SCCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHHT
T ss_pred CCCeEEEEeecccCCCCC---------------------------------------CCchhHHHHHHHHHHHHHHHHHH
Confidence 223899999987764210 22469999999999998776
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|+.++.+.||.|..+... .... .. ....++.++|+|++++.++..
T Consensus 162 ~~~gi~v~~v~PG~v~t~~~~-----------------~~~~----~~-----~~~~~~~~~dvA~~i~~l~~~ 209 (230)
T 3guy_A 162 KGKPMKIIAVYPGGMATEFWE-----------------TSGK----SL-----DTSSFMSAEDAALMIHGALAN 209 (230)
T ss_dssp TTSSCEEEEEEECCC------------------------------------------CCCHHHHHHHHHHHCCE
T ss_pred HhcCeEEEEEECCcccChHHH-----------------hcCC----CC-----CcccCCCHHHHHHHHHHHHhC
Confidence 5899999999998554210 0000 01 123578999999999988754
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.94 E-value=8.8e-09 Score=101.24 Aligned_cols=144 Identities=17% Similarity=0.149 Sum_probs=99.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 49 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~ 122 (235)
T 3l6e_A 49 NAVIGIVADLAHHE------DVDVAFAAAVEWGGLPELVLHCAGTGEFGPVGVYTAEQIRRVMESNLVSTILVAQQTVRL 122 (235)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHCSCSEEEEECCCC------CCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCceEEECCCCCHH------HHHHHHHHHHHhcCCCcEEEECCCCCCCCChHhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 36899999999653 3555544 57999999998542 1334568899999999999998641
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
....+||++||.+.+.... ....|+.||+..+.+++.++
T Consensus 123 ~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~~~~~la 163 (235)
T 3l6e_A 123 IGERGGVLANVLSSAAQVGKA---------------------------------------NESLYCASKWGMRGFLESLR 163 (235)
T ss_dssp HTTTCEEEEEECCEECCSSCS---------------------------------------SHHHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCEEEEEeCHHhcCCCC---------------------------------------CCcHHHHHHHHHHHHHHHHH
Confidence 1223999999987654210 11459999999999998766
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|+.+++++||.|..+... .. .. . ....++..+|+|++++.++..
T Consensus 164 ~e~~~~gi~v~~v~PG~v~T~~~~-------~~----------~~-----~-----~~~~~~~pedvA~~v~~l~~~ 213 (235)
T 3l6e_A 164 AELKDSPLRLVNLYPSGIRSEFWD-------NT----------DH-----V-----DPSGFMTPEDAAAYMLDALEA 213 (235)
T ss_dssp HHTTTSSEEEEEEEEEEECCCC--------------------------------------CBCHHHHHHHHHHHTCC
T ss_pred HHhhccCCEEEEEeCCCccCcchh-------cc----------CC-----C-----CCcCCCCHHHHHHHHHHHHhC
Confidence 5799999999988553210 00 00 0 011478899999999988854
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=98.93 E-value=7.1e-09 Score=102.92 Aligned_cols=146 Identities=16% Similarity=0.116 Sum_probs=99.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh---h---hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF---D---ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~---~---~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... . ..+...+++|+.|+.++++++...
T Consensus 59 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~ 132 (250)
T 3nyw_A 59 QEPIVLPLDITDCT------KADTEIKDIHQKYGAVDILVNAAAMFMDGSLSEPVDNFRKIMEINVIAQYGILKTVTEIM 132 (250)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHCCEEEEEECCCCCCCCCCSCHHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcceEEeccCCCHH------HHHHHHHHHHHhcCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 57889999999653 3555443 68999999997532 1 234568899999999999998531
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+..+||++||.+.+.... ....|+.||++.+.+++.++
T Consensus 133 ~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~~la 173 (250)
T 3nyw_A 133 KVQKNGYIFNVASRAAKYGFA---------------------------------------DGGIYGSTKFALLGLAESLY 173 (250)
T ss_dssp HHHTCEEEEEECC-------C---------------------------------------CTTHHHHHHHHHHHHHHHHH
T ss_pred HhCCCeEEEEEccHHhcCCCC---------------------------------------CCcchHHHHHHHHHHHHHHH
Confidence 2457999999987543100 12469999999999887765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.|+.+++++||.|..+. .... .. ......++..+|+|++++.++...
T Consensus 174 ~e~~~~gi~vn~v~PG~v~T~~-----------------~~~~----~~-----~~~~~~~~~p~dva~~v~~l~s~~ 225 (250)
T 3nyw_A 174 RELAPLGIRVTTLCPGWVNTDM-----------------AKKA----GT-----PFKDEEMIQPDDLLNTIRCLLNLS 225 (250)
T ss_dssp HHHGGGTEEEEEEEESSBCSHH-----------------HHHT----TC-----CSCGGGSBCHHHHHHHHHHHHTSC
T ss_pred HHhhhcCcEEEEEecCcccCch-----------------hhhc----CC-----CcccccCCCHHHHHHHHHHHHcCC
Confidence 58999999999885431 1110 00 111235789999999999998643
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.92 E-value=2.6e-08 Score=100.59 Aligned_cols=152 Identities=11% Similarity=0.097 Sum_probs=101.7
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.+.++.+|++++. ++..+++ .+|+|||+||.... ...+..++++|+.|+.++++++...
T Consensus 84 ~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~ 157 (281)
T 4dry_A 84 IVRAVVCDVGDPD------QVAALFAAVRAEFARLDLLVNNAGSNVPPVPLEEVTFEQWNGIVAANLTGAFLCTQHAFRM 157 (281)
T ss_dssp CEEEEECCTTCHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred eEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 4689999999654 3555544 57999999997532 1335568999999999998887642
Q ss_pred ---C--CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 343 ---S--QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 343 ---~--~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
. ...+||++||++.+.... ....|+.||++.+.+++
T Consensus 158 ~~~~~~~~g~IV~isS~~~~~~~~---------------------------------------~~~~Y~asKaa~~~l~~ 198 (281)
T 4dry_A 158 MKAQTPRGGRIINNGSISAQTPRP---------------------------------------NSAPYTATKHAITGLTK 198 (281)
T ss_dssp HHHSSSCCEEEEEECCGGGTCCCT---------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCcEEEEECCHHhCCCCC---------------------------------------CChhHHHHHHHHHHHHH
Confidence 1 146899999987653210 22469999999999987
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++ .|+.+.+++||.|..+.... +..+... . ........++.++|+|++++.++..
T Consensus 199 ~la~e~~~~gI~vn~v~PG~v~T~~~~~-----------------~~~~~~~-~-~~~~~~~~~~~pedvA~~v~fL~s~ 259 (281)
T 4dry_A 199 STALDGRMHDIACGQIDIGNAATDMTAR-----------------MSTGVLQ-A-NGEVAAEPTIPIEHIAEAVVYMASL 259 (281)
T ss_dssp HHHHHHGGGTEEEEEEEEECBCC------------------------CEEEC-T-TSCEEECCCBCHHHHHHHHHHHHHS
T ss_pred HHHHHhcccCeEEEEEEECcCcChhhhh-----------------hcchhhh-h-hhcccccCCCCHHHHHHHHHHHhCC
Confidence 765 68999999999986542210 0000000 0 0001112367899999999999865
Q ss_pred h
Q psy5825 493 T 493 (596)
Q Consensus 493 ~ 493 (596)
+
T Consensus 260 ~ 260 (281)
T 4dry_A 260 P 260 (281)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=98.92 E-value=1e-08 Score=102.10 Aligned_cols=114 Identities=17% Similarity=0.169 Sum_probs=83.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---------ccc--EEEEcCccCC-----h-----hhhHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---------HIH--VIIHAAASLR-----F-----DELIQDAFTLNIQATREL 335 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---------~vd--~ViH~AA~v~-----~-----~~~~~~~~~~NV~GT~~L 335 (596)
.++.++.+|++++. .+..+++ .+| +|||+||... + ...+..++++|+.|+.+|
T Consensus 60 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~~~g~~d~~~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l 133 (259)
T 1oaa_A 60 LKVVLAAADLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCL 133 (259)
T ss_dssp SEEEEEECCTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHH
T ss_pred CeEEEEecCCCCHH------HHHHHHHHHHhccccccCCccEEEECCcccCCCCcchhccCCHHHHHHHHHHHHHHHHHH
Confidence 46899999999753 3444432 357 9999999742 1 123556889999999999
Q ss_pred HHHHHhcC-----CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHH
Q psy5825 336 LDLATRCS-----QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKA 410 (596)
Q Consensus 336 L~~a~~~~-----~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~ 410 (596)
++++...- +..+||++||.+++.... ....|+.||+
T Consensus 134 ~~~~~~~~~~~~~~~g~iv~isS~~~~~~~~---------------------------------------~~~~Y~asKa 174 (259)
T 1oaa_A 134 TSGTLNAFQDSPGLSKTVVNISSLCALQPYK---------------------------------------GWGLYCAGKA 174 (259)
T ss_dssp HHHHHHTSCCCTTCEEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHH
T ss_pred HHHHHHHHhhccCCCceEEEEcCchhcCCCC---------------------------------------CccHHHHHHH
Confidence 99997621 235799999988754210 1246999999
Q ss_pred HHHHHHHHHh---cCCCEEEecCCcccc
Q psy5825 411 IGESVVEKYL---YKLPLAMVRPSIVVS 435 (596)
Q Consensus 411 ~aE~lv~~~~---~gl~~~IlRp~~V~G 435 (596)
..+.+++.++ .++.++++.||.|-.
T Consensus 175 a~~~~~~~la~e~~~i~vn~v~PG~v~T 202 (259)
T 1oaa_A 175 ARDMLYQVLAAEEPSVRVLSYAPGPLDN 202 (259)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEECCSBSS
T ss_pred HHHHHHHHHHhhCCCceEEEecCCCcCc
Confidence 9999998877 458888888888743
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.90 E-value=6.1e-08 Score=95.53 Aligned_cols=148 Identities=14% Similarity=0.110 Sum_probs=99.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|+... +..++..+++ .+|+|||+||.... ...+...+++|+.|+.++++++..
T Consensus 64 ~~~~~~~~d~d~~----~~~~~~~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~ 139 (247)
T 3i1j_A 64 PQPLIIALNLENA----TAQQYRELAARVEHEFGRLDGLLHNASIIGPRTPLEQLPDEDFMQVMHVNVNATFMLTRALLP 139 (247)
T ss_dssp CCCEEEECCTTTC----CHHHHHHHHHHHHHHHSCCSEEEECCCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEeccccC----CHHHHHHHHHHHHHhCCCCCEEEECCccCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHH
Confidence 4677888887321 2233444443 68999999997532 134556889999999999999853
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
..+..+||++||...+.... ....|+.||++.+.+++.
T Consensus 140 ~~~~~~~~~iv~isS~~~~~~~~---------------------------------------~~~~Y~~sK~a~~~~~~~ 180 (247)
T 3i1j_A 140 LLKRSEDASIAFTSSSVGRKGRA---------------------------------------NWGAYGVSKFATEGLMQT 180 (247)
T ss_dssp HHTTSSSEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCeEEEEcchhhcCCCC---------------------------------------CcchhHHHHHHHHHHHHH
Confidence 13457999999987653210 124699999999999887
Q ss_pred Hh------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 419 YL------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 419 ~~------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++ .++.++++.||.|..+ +...... ......+...+|+|++++.++..
T Consensus 181 la~e~~~~~~i~v~~v~PG~v~t~-----------------~~~~~~~---------~~~~~~~~~p~dva~~~~~l~s~ 234 (247)
T 3i1j_A 181 LADELEGVTAVRANSINPGATRTG-----------------MRAQAYP---------DENPLNNPAPEDIMPVYLYLMGP 234 (247)
T ss_dssp HHHHHTTTSSEEEEEEECCCCSSH-----------------HHHHHST---------TSCGGGSCCGGGGTHHHHHHHSG
T ss_pred HHHHhcCCCCeEEEEEecCcccCc-----------------cchhccc---------ccCccCCCCHHHHHHHHHHHhCc
Confidence 65 3678899999887432 1111111 11223456789999999998864
Q ss_pred h
Q psy5825 493 T 493 (596)
Q Consensus 493 ~ 493 (596)
.
T Consensus 235 ~ 235 (247)
T 3i1j_A 235 D 235 (247)
T ss_dssp G
T ss_pred h
Confidence 3
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.89 E-value=3.4e-08 Score=102.89 Aligned_cols=148 Identities=14% Similarity=0.120 Sum_probs=103.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+||+++. .+..+++ ++|+|||+||.... ...+..++++|+.|+.+|+++|...
T Consensus 101 ~~~~~~~~Dv~d~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 174 (346)
T 3kvo_A 101 GKALPCIVDVRDEQ------QISAAVEKAIKKFGGIDILVNNASAISLTNTLDTPTKRLDLMMNVNTRGTYLASKACIPY 174 (346)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57899999999654 3555544 78999999997542 1345668999999999999999641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... + . ....|+.||+..+.+++.+
T Consensus 175 m~~~~~g~IV~iSS~~~~~~~~------~------------------------------~-~~~~Y~aSKaal~~l~~~l 217 (346)
T 3kvo_A 175 LKKSKVAHILNISPPLNLNPVW------F------------------------------K-QHCAYTIAKYGMSMYVLGM 217 (346)
T ss_dssp HTTCSSCEEEEECCCCCCCGGG------T------------------------------S-SSHHHHHHHHHHHHHHHHH
T ss_pred HHHCCCCEEEEECCHHHcCCCC------C------------------------------C-CchHHHHHHHHHHHHHHHH
Confidence 3457999999987654210 0 0 2246999999999999887
Q ss_pred h----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|+.++++.||.++.. .++. ...+ ......+..++|+|++++.++..
T Consensus 218 a~e~~~gIrvn~v~PG~~i~T----------------~~~~-~~~~--------~~~~~r~~~pedvA~~v~~L~s~ 269 (346)
T 3kvo_A 218 AEEFKGEIAVNALWPKTAIHT----------------AAMD-MLGG--------PGIESQCRKVDIIADAAYSIFQK 269 (346)
T ss_dssp HHHTTTTCEEEEEECSBCBCC----------------HHHH-HHCC----------CGGGCBCTHHHHHHHHHHHTS
T ss_pred HHHhcCCcEEEEEeCCCcccc----------------HHHH-hhcc--------ccccccCCCHHHHHHHHHHHHhc
Confidence 6 5799999999853221 1111 1111 11123466789999999999865
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=98.86 E-value=3.6e-08 Score=99.14 Aligned_cols=147 Identities=10% Similarity=0.039 Sum_probs=100.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..+++ .+|+|||+||.... ...+...+++|+.|+.++++++...
T Consensus 62 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 135 (274)
T 3e03_A 62 GQGLALKCDIREED------QVRAAVAATVDTFGGIDILVNNASAIWLRGTLDTPMKRFDLMQQVNARGSFVCAQACLPH 135 (274)
T ss_dssp SEEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGSCHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCcccCCCcccCCHHHHHHHHhHhhHhHHHHHHHHHHH
Confidence 67899999999654 3555543 68999999997532 1234568899999999999998641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+..+||++||...+.... . + ....|+.||+..+.+++.+
T Consensus 136 m~~~~~g~iv~isS~~~~~~~~---------------------------~----~------~~~~Y~asKaal~~l~~~l 178 (274)
T 3e03_A 136 LLQAPNPHILTLAPPPSLNPAW---------------------------W----G------AHTGYTLAKMGMSLVTLGL 178 (274)
T ss_dssp HTTSSSCEEEECCCCCCCCHHH---------------------------H----H------HCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEEECChHhcCCCC---------------------------C----C------CCchHHHHHHHHHHHHHHH
Confidence 3457999999987653100 0 0 1246999999999998776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
+ .|+.++++.||.++... +. .... ......+...+++|++++.++..
T Consensus 179 a~e~~~~gI~vn~v~PG~~v~T~----------------~~-~~~~---------~~~~~~~~~pedvA~~v~~l~s~ 230 (274)
T 3e03_A 179 AAEFGPQGVAINALWPRTVIATD----------------AI-NMLP---------GVDAAACRRPEIMADAAHAVLTR 230 (274)
T ss_dssp HHHHGGGTCEEEEEECSBCBCC---------------------------------CCCGGGSBCTHHHHHHHHHHHTS
T ss_pred HHHhhhcCEEEEEEECCcccccc----------------hh-hhcc---------cccccccCCHHHHHHHHHHHhCc
Confidence 5 68999999998532210 00 0000 01122367889999999998854
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=98.85 E-value=3.8e-08 Score=97.13 Aligned_cols=152 Identities=13% Similarity=0.008 Sum_probs=99.3
Q ss_pred cccEEEEcCccCCh----------hhhHHHHHHHHHHHHHHHHHHHHh---cCCCceEEEecCcccccCCccccccccCC
Q psy5825 304 HIHVIIHAAASLRF----------DELIQDAFTLNIQATRELLDLATR---CSQLKAILHVSTLYTHSYREDIQEEFYPP 370 (596)
Q Consensus 304 ~vd~ViH~AA~v~~----------~~~~~~~~~~NV~GT~~LL~~a~~---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~ 370 (596)
.+|+|||+||.... ...+...+++|+.|+.++++++.. ..+..+||++||...+....
T Consensus 72 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~~~g~iv~isS~~~~~~~~--------- 142 (244)
T 1zmo_A 72 AIDTIVSNDYIPRPMNRLPLEGTSEADIRQMFEALSIFPILLLQSAIAPLRAAGGASVIFITSSVGKKPLA--------- 142 (244)
T ss_dssp CEEEEEECCCCCTTGGGCCSTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGTSCCT---------
T ss_pred CCCEEEECCCcCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEECChhhCCCCC---------
Confidence 68999999997544 123556899999999999998863 13467999999987754210
Q ss_pred CCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccC
Q psy5825 371 LFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWS 445 (596)
Q Consensus 371 ~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~ 445 (596)
....|+.||+..+.+++.++ .|+.+++++||.|..+... .|
T Consensus 143 ------------------------------~~~~Y~asK~a~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~~~---~~- 188 (244)
T 1zmo_A 143 ------------------------------YNPLYGPARAATVALVESAAKTLSRDGILLYAIGPNFFNNPTYF---PT- 188 (244)
T ss_dssp ------------------------------TCTTHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBCBTTTB---CH-
T ss_pred ------------------------------CchHHHHHHHHHHHHHHHHHHHHhhcCcEEEEEeeCCCcCCccc---cc-
Confidence 12459999999999988765 5899999999998554210 00
Q ss_pred CCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 446 NNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 446 ~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..+... .....+... .++ ..-+...+|+|++++.++...... ..|+++++.+|
T Consensus 189 ~~~~~~-~~~~~~~~~---~~p-----~~r~~~pe~vA~~v~~l~s~~~~~----------------~tG~~i~vdgG 241 (244)
T 1zmo_A 189 SDWENN-PELRERVDR---DVP-----LGRLGRPDEMGALITFLASRRAAP----------------IVGQFFAFTGG 241 (244)
T ss_dssp HHHHHC-HHHHHHHHH---HCT-----TCSCBCHHHHHHHHHHHHTTTTGG----------------GTTCEEEESTT
T ss_pred ccccch-HHHHHHHhc---CCC-----CCCCcCHHHHHHHHHHHcCccccC----------------ccCCEEEeCCC
Confidence 000000 111111110 011 113678899999999988643221 35788888776
|
| >1y7t_A Malate dehydrogenase; NAD-dependent-MDH-NADPH complex, oxidoreductase; HET: NDP; 1.65A {Thermus thermophilus} SCOP: c.2.1.5 d.162.1.1 PDB: 1iz9_A* 2cvq_A* 1bmd_A* 1bdm_A* 1wze_A* 1wzi_A* | Back alignment and structure |
|---|
Probab=98.82 E-value=7.5e-09 Score=107.04 Aligned_cols=118 Identities=12% Similarity=-0.002 Sum_probs=83.0
Q ss_pred eccCCCCCCCCHHHHHHHhccccEEEEcCccCCh-hhhHHHHHHHHHHHHHHHHHHHHhcCCCc-eEEEecCcc-cccCC
Q psy5825 284 GDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF-DELIQDAFTLNIQATRELLDLATRCSQLK-AILHVSTLY-THSYR 360 (596)
Q Consensus 284 GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~-~~~~~~~~~~NV~GT~~LL~~a~~~~~vk-rfV~vSS~~-v~g~~ 360 (596)
+|+.+... +..++.++|+|||+||.... ..+...++.+|+.||.+|+++|.+..++. +||++|+.. +...
T Consensus 66 ~di~~~~~------~~~a~~~~D~Vih~Ag~~~~~~~~~~~~~~~Nv~~t~~l~~a~~~~~~~~~~vvv~snp~~~~~~- 138 (327)
T 1y7t_A 66 AGLEATDD------PKVAFKDADYALLVGAAPRKAGMERRDLLQVNGKIFTEQGRALAEVAKKDVKVLVVGNPANTNAL- 138 (327)
T ss_dssp EEEEEESC------HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSSSHHHHHH-
T ss_pred CCeEeccC------hHHHhCCCCEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhhcCCCeEEEEeCCchhhhHH-
Confidence 67664332 66778899999999998652 34556789999999999999999843243 677777542 1110
Q ss_pred ccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCC
Q psy5825 361 EDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWK 438 (596)
Q Consensus 361 ~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~ 438 (596)
+.+ ...+.+. ..+.|+.||+.+|+++..++ .|++++++|+++|||++.
T Consensus 139 --~~~-------------------------~~~~~~~---p~~~yg~tkl~~er~~~~~a~~~g~~~~~vr~~~V~G~h~ 188 (327)
T 1y7t_A 139 --IAY-------------------------KNAPGLN---PRNFTAMTRLDHNRAKAQLAKKTGTGVDRIRRMTVWGNHS 188 (327)
T ss_dssp --HHH-------------------------HTCTTSC---GGGEEECCHHHHHHHHHHHHHHHTCCGGGEECCEEEBCSS
T ss_pred --HHH-------------------------HHcCCCC---hhheeccchHHHHHHHHHHHHHhCcChhheeeeEEEcCCC
Confidence 000 0000000 12459999999999998877 799999999999999865
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=98.79 E-value=1.3e-08 Score=105.26 Aligned_cols=116 Identities=12% Similarity=0.172 Sum_probs=88.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc-----ccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc--
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH-----IHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC-- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~-----vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~-- 342 (596)
.++.++.+|++++ +.+..+++. +|+|||+||...+ ...+..++.+|+.|+.+|++++...
T Consensus 57 ~~~~~~~~Dv~d~------~~v~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~ 130 (327)
T 1jtv_A 57 GSLETLQLDVRDS------KSVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK 130 (327)
T ss_dssp TSEEEEECCTTCH------HHHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCH------HHHHHHHHHHhcCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH
Confidence 4789999999964 457777764 8999999997532 1235568999999999999997421
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+..+||++||++.+.... ....|+.||+..+.+++.++
T Consensus 131 ~~~~g~IV~isS~~~~~~~~---------------------------------------~~~~Y~aSK~a~~~~~~~la~ 171 (327)
T 1jtv_A 131 RRGSGRVLVTGSVGGLMGLP---------------------------------------FNDVYCASKFALEGLCESLAV 171 (327)
T ss_dssp HHTCEEEEEEEEGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred hcCCCEEEEECCcccccCCC---------------------------------------CChHHHHHHHHHHHHHHHHHH
Confidence 3568999999987653210 22469999999999998765
Q ss_pred ----cCCCEEEecCCccccCC
Q psy5825 421 ----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~ 437 (596)
.|+.+++++||.|..+.
T Consensus 172 el~~~gI~v~~v~PG~v~T~~ 192 (327)
T 1jtv_A 172 LLLPFGVHLSLIECGPVHTAF 192 (327)
T ss_dssp HHGGGTEEEEEEEECCBCC--
T ss_pred HhhhcCcEEEEEEeCcccChH
Confidence 68999999999997654
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=98.77 E-value=3.7e-08 Score=101.42 Aligned_cols=105 Identities=11% Similarity=0.048 Sum_probs=76.8
Q ss_pred EeccCCCCCCCCHHHHHHH-------hccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---CCC
Q psy5825 283 SGDISQPSLGISSHDQQFI-------QHHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC---SQL 345 (596)
Q Consensus 283 ~GDl~~~~lGL~~~~~~~l-------~~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~---~~v 345 (596)
.+|+++... +..+ +..+|+|||+||..... ..+...+.+|+.|+.+|++++... .+.
T Consensus 70 ~~D~~~~~~------~~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~~~ 143 (319)
T 1gz6_A 70 VANYDSVEA------GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNY 143 (319)
T ss_dssp EEECCCGGG------HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred EEeCCCHHH------HHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCC
Confidence 478886542 3333 24689999999975421 235568899999999999988431 246
Q ss_pred ceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----
Q psy5825 346 KAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---- 420 (596)
Q Consensus 346 krfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---- 420 (596)
.+||++||.+. ++.. ....|+.||+..+.+.+.++
T Consensus 144 grIV~vsS~~~~~~~~----------------------------------------~~~~Y~aSK~a~~~~~~~la~el~ 183 (319)
T 1gz6_A 144 GRIIMTASASGIYGNF----------------------------------------GQANYSAAKLGLLGLANTLVIEGR 183 (319)
T ss_dssp EEEEEECCHHHHHCCT----------------------------------------TCHHHHHHHHHHHHHHHHHHHHTG
T ss_pred CEEEEECChhhccCCC----------------------------------------CCHHHHHHHHHHHHHHHHHHHHhc
Confidence 79999999754 3320 12469999999999987765
Q ss_pred -cCCCEEEecCCcc
Q psy5825 421 -YKLPLAMVRPSIV 433 (596)
Q Consensus 421 -~gl~~~IlRp~~V 433 (596)
.|+.+++++||.+
T Consensus 184 ~~gI~vn~v~PG~~ 197 (319)
T 1gz6_A 184 KNNIHCNTIAPNAG 197 (319)
T ss_dssp GGTEEEEEEEEECC
T ss_pred ccCEEEEEEeCCCc
Confidence 5899999999987
|
| >1d7o_A Enoyl-[acyl-carrier protein] reductase (NADH) PRE; triclosan, enoyl reductase, oxidoreductase; HET: NAD TCL; 1.90A {Brassica napus} SCOP: c.2.1.2 PDB: 1eno_A* 1enp_A* 1cwu_A* | Back alignment and structure |
|---|
Probab=98.71 E-value=1.6e-07 Score=95.34 Aligned_cols=151 Identities=13% Similarity=-0.021 Sum_probs=99.5
Q ss_pred ccccEEEEcCccCC-----hh----hhHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEecCcccccCCccccccccCCCC
Q psy5825 303 HHIHVIIHAAASLR-----FD----ELIQDAFTLNIQATRELLDLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLF 372 (596)
Q Consensus 303 ~~vd~ViH~AA~v~-----~~----~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~ 372 (596)
..+|+|||+||... +. ..+...+.+|+.|+.++++++... ....+||++||.+.+....
T Consensus 118 g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~~~~~~----------- 186 (297)
T 1d7o_A 118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP----------- 186 (297)
T ss_dssp SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT-----------
T ss_pred CCCCEEEECCccCccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhccCceEEEEeccccccCCC-----------
Confidence 36899999998532 11 234568899999999999999862 1125899999987643210
Q ss_pred ChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh------cCCCEEEecCCccccCCCCCccccCC
Q psy5825 373 SYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL------YKLPLAMVRPSIVVSTWKEPIVGWSN 446 (596)
Q Consensus 373 ~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~------~gl~~~IlRp~~V~G~~~~p~~G~~~ 446 (596)
. +...|+.||+..+.+++.++ .|+.+++++||.|.++....
T Consensus 187 --------------------------~-~~~~Y~asKaa~~~~~~~la~e~~~~~gi~vn~v~PG~v~T~~~~~------ 233 (297)
T 1d7o_A 187 --------------------------G-YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAKA------ 233 (297)
T ss_dssp --------------------------T-CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSSC------
T ss_pred --------------------------C-cchHHHHHHHHHHHHHHHHHHHhCcccCcEEEEEeccccccchhhh------
Confidence 0 11359999999999887654 38999999999998864321
Q ss_pred CCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 447 NLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 447 ~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
......+...+... .+ ...+..++|+|++++.++...... ..|++|++.++
T Consensus 234 -~~~~~~~~~~~~~~----~p-----~~r~~~pedvA~~v~~l~s~~~~~----------------itG~~i~vdgG 284 (297)
T 1d7o_A 234 -IGFIDTMIEYSYNN----AP-----IQKTLTADEVGNAAAFLVSPLASA----------------ITGATIYVDNG 284 (297)
T ss_dssp -CSHHHHHHHHHHHH----SS-----SCCCBCHHHHHHHHHHHTSGGGTT----------------CCSCEEEESTT
T ss_pred -ccccHHHHHHhhcc----CC-----CCCCCCHHHHHHHHHHHhCccccC----------------CCCCEEEECCC
Confidence 11011121111111 11 113568999999998887543221 35889999887
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=6e-08 Score=105.56 Aligned_cols=114 Identities=15% Similarity=0.085 Sum_probs=89.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccC-Ch-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASL-RF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v-~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. .+..++. .+|+|||+||.. .. ...+...+.+|+.|+.+|++++..
T Consensus 292 ~~v~~~~~Dvtd~~------~v~~~~~~i~~~g~ld~vVh~AGv~~~~~~l~~~t~e~~~~vl~~nv~g~~~L~~~~~~- 364 (496)
T 3mje_A 292 VRVTIAACDAADRE------ALAALLAELPEDAPLTAVFHSAGVAHDDAPVADLTLGQLDALMRAKLTAARHLHELTAD- 364 (496)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHTCCTTSCEEEEEECCCCCCSCCCTTTCCHHHHHHHHHTTHHHHHHHHHHHTT-
T ss_pred CeEEEEEccCCCHH------HHHHHHHHHHHhCCCeEEEECCcccCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHhhc-
Confidence 57999999999653 4777765 489999999986 21 123456889999999999999988
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-c
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-Y 421 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~ 421 (596)
....+||++||++.+.... ....|+.+|...+.+..... .
T Consensus 365 ~~~~~iV~~SS~a~~~g~~---------------------------------------g~~~YaAaKa~ldala~~~~~~ 405 (496)
T 3mje_A 365 LDLDAFVLFSSGAAVWGSG---------------------------------------GQPGYAAANAYLDALAEHRRSL 405 (496)
T ss_dssp SCCSEEEEEEEHHHHTTCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEEeChHhcCCCC---------------------------------------CcHHHHHHHHHHHHHHHHHHhc
Confidence 4678999999976542110 12469999999999998777 9
Q ss_pred CCCEEEecCCccccC
Q psy5825 422 KLPLAMVRPSIVVST 436 (596)
Q Consensus 422 gl~~~IlRp~~V~G~ 436 (596)
|++++++.||.+.+.
T Consensus 406 Gi~v~sV~pG~w~~~ 420 (496)
T 3mje_A 406 GLTASSVAWGTWGEV 420 (496)
T ss_dssp TCCCEEEEECEESSS
T ss_pred CCeEEEEECCcccCC
Confidence 999999999988653
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=98.70 E-value=4.1e-08 Score=98.31 Aligned_cols=114 Identities=10% Similarity=0.057 Sum_probs=85.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc----------cccEEEEcCccCCh------------hhhHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH----------HIHVIIHAAASLRF------------DELIQDAFTLNIQATRE 334 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~----------~vd~ViH~AA~v~~------------~~~~~~~~~~NV~GT~~ 334 (596)
.++.++.+|++++. ++..+++ .+|+|||+||.... ...+...+.+|+.|+.+
T Consensus 56 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~~~~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~ 129 (269)
T 2h7i_A 56 AKAPLLELDVQNEE------HLASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYAS 129 (269)
T ss_dssp SCCCEEECCTTCHH------HHHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHH
T ss_pred CCceEEEccCCCHH------HHHHHHHHHHHHhCCCCCceEEEECCccCccccccccccccCCHHHHHHHHHHhhHHHHH
Confidence 46788999999653 3555554 79999999997541 12345688999999999
Q ss_pred HHHHHHhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHH
Q psy5825 335 LLDLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGE 413 (596)
Q Consensus 335 LL~~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE 413 (596)
+++++... ....+||++||...++.. ....|+.||+..+
T Consensus 130 l~~~~~~~~~~~g~iv~iss~~~~~~~----------------------------------------~~~~Y~asKaa~~ 169 (269)
T 2h7i_A 130 MAKALLPIMNPGGSIVGMDFDPSRAMP----------------------------------------AYNWMTVAKSALE 169 (269)
T ss_dssp HHHHHGGGEEEEEEEEEEECCCSSCCT----------------------------------------TTHHHHHHHHHHH
T ss_pred HHHHHHHhhccCCeEEEEcCccccccC----------------------------------------chHHHHHHHHHHH
Confidence 99999752 112589999987653310 1246999999999
Q ss_pred HHHHHHh-----cCCCEEEecCCccccC
Q psy5825 414 SVVEKYL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 414 ~lv~~~~-----~gl~~~IlRp~~V~G~ 436 (596)
.+++.++ .|+.+++++||.|..+
T Consensus 170 ~l~~~la~e~~~~gi~vn~v~PG~v~T~ 197 (269)
T 2h7i_A 170 SVNRFVAREAGKYGVRSNLVAAGPIRTL 197 (269)
T ss_dssp HHHHHHHHHHHTTTCEEEEEEECCCCCH
T ss_pred HHHHHHHHHhcccCcEEEEEecCcccch
Confidence 9987765 5899999999998553
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=98.66 E-value=1.2e-07 Score=94.46 Aligned_cols=115 Identities=17% Similarity=0.177 Sum_probs=83.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--------ccccEEEEcCc--cC--------Ch----hhhHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--------HHIHVIIHAAA--SL--------RF----DELIQDAFTLNIQATRE 334 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--------~~vd~ViH~AA--~v--------~~----~~~~~~~~~~NV~GT~~ 334 (596)
.++.++.+|++++. .+..++ ..+|+|||+|+ .. .+ ...+..++.+|+.|+.+
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~~g~id~lvnnAg~g~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~ 127 (260)
T 2qq5_A 54 GQCVPVVCDSSQES------EVRSLFEQVDREQQGRLDVLVNNAYAGVQTILNTRNKAFWETPASMWDDINNVGLRGHYF 127 (260)
T ss_dssp SEEEEEECCTTSHH------HHHHHHHHHHHHHTTCCCEEEECCCTTHHHHHHTTTCCTTTSCTTHHHHHHTTTTHHHHH
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHhcCCCceEEEECCccccccccccCCCccccCCHHHHHHHHhhcchhHHH
Confidence 57899999999754 344433 35799999994 21 11 12355688899999988
Q ss_pred HHHHHHh---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHH
Q psy5825 335 LLDLATR---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAI 411 (596)
Q Consensus 335 LL~~a~~---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~ 411 (596)
++.++.. ..+..+||++||.+.+... ....|+.||+.
T Consensus 128 ~~~~~~~~~~~~~~g~iv~isS~~~~~~~----------------------------------------~~~~Y~asK~a 167 (260)
T 2qq5_A 128 CSVYGARLMVPAGQGLIVVISSPGSLQYM----------------------------------------FNVPYGVGKAA 167 (260)
T ss_dssp HHHHHHHHHGGGTCCEEEEECCGGGTSCC----------------------------------------SSHHHHHHHHH
T ss_pred HHHHHHHHHhhcCCcEEEEEcChhhcCCC----------------------------------------CCCchHHHHHH
Confidence 8877753 1345799999998765320 11459999999
Q ss_pred HHHHHHHHh-----cCCCEEEecCCccccCC
Q psy5825 412 GESVVEKYL-----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 412 aE~lv~~~~-----~gl~~~IlRp~~V~G~~ 437 (596)
.+.+++.++ .|+++++++||.|..+.
T Consensus 168 ~~~~~~~la~e~~~~gi~v~~v~PG~v~T~~ 198 (260)
T 2qq5_A 168 CDKLAADCAHELRRHGVSCVSLWPGIVQTEL 198 (260)
T ss_dssp HHHHHHHHHHHHGGGTCEEEEEECCCSCTTT
T ss_pred HHHHHHHHHHHhccCCeEEEEEecCccccHH
Confidence 999987765 68999999999997653
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=98.63 E-value=1.7e-06 Score=86.05 Aligned_cols=175 Identities=10% Similarity=0.081 Sum_probs=111.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC---h---hhhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR---F---DELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~---~---~~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++. ++..++ ..+|++||+||... + ...+...+++|+.|+..+++++...
T Consensus 55 ~~~~~~~~Dv~~~~------~v~~~v~~~~~~~G~iDiLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m 128 (258)
T 4gkb_A 55 PRATYLPVELQDDA------QCRDAVAQTIATFGRLDGLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHL 128 (258)
T ss_dssp TTCEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CCEEEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHH
Confidence 57889999999653 344443 46899999999642 1 2345668899999999999888641
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+-.++|++||++...... ....|+.||+.-..+.+..+
T Consensus 129 ~~~~G~IVnisS~~~~~~~~---------------------------------------~~~~Y~asKaav~~ltr~lA~ 169 (258)
T 4gkb_A 129 KATRGAIVNISSKTAVTGQG---------------------------------------NTSGYCASKGAQLALTREWAV 169 (258)
T ss_dssp HHHTCEEEEECCTHHHHCCS---------------------------------------SCHHHHHHHHHHHHHHHHHHH
T ss_pred HhcCCeEEEEeehhhccCCC---------------------------------------CchHHHHHHHHHHHHHHHHHH
Confidence 1225899999987643210 22469999999998887765
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
+|+++..+-||.|--+.... |......+...+..+.. . +|. ..-+...+|+|++++.++-.....
T Consensus 170 ela~~gIrVN~V~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~-~---~pl----g~R~g~peeiA~~v~fLaS~~a~~ 238 (258)
T 4gkb_A 170 ALREHGVRVNAVIPAEVMTPLYRN---WIATFEDPEAKLAEIAA-K---VPL----GRRFTTPDEIADTAVFLLSPRASH 238 (258)
T ss_dssp HHGGGTCEEEEEEECSBCCSCC--------------CHHHHHHT-T---CTT----TTSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HhcccCeEEEEEecCCCCChhHhh---hhhcccChHHHHHHHHh-c---CCC----CCCCcCHHHHHHHHHHHhCchhcC
Confidence 79999999999996543211 11110001111111111 1 111 012556789999999888543321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
-.|+++++.+|
T Consensus 239 ----------------iTG~~i~VDGG 249 (258)
T 4gkb_A 239 ----------------TTGEWLFVDGG 249 (258)
T ss_dssp ----------------CCSCEEEESTT
T ss_pred ----------------ccCCeEEECCC
Confidence 46899999887
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.59 E-value=3.3e-06 Score=83.72 Aligned_cols=172 Identities=11% Similarity=0.022 Sum_probs=113.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC----hh----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR----FD----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~----~~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. +++.++ ..+|++||+||... +. ..++..+++|+.|+..+++++..
T Consensus 56 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~G~iDiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p 129 (254)
T 4fn4_A 56 KEVLGVKADVSKKK------DVEEFVRRTFETYSRIDVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIP 129 (254)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHH
Confidence 57899999999654 355554 36899999999643 21 23566899999999999988865
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+-.++|++||++...... ....|+.||+.-..+.+.
T Consensus 130 ~m~~~~~G~IVnisS~~g~~~~~---------------------------------------~~~~Y~asKaal~~ltr~ 170 (254)
T 4fn4_A 130 IMLKQGKGVIVNTASIAGIRGGF---------------------------------------AGAPYTVAKHGLIGLTRS 170 (254)
T ss_dssp HHHHHTCEEEEEECCGGGTCSSS---------------------------------------SCHHHHHHHHHHHHHHHH
T ss_pred HHHHcCCcEEEEEechhhcCCCC---------------------------------------CChHHHHHHHHHHHHHHH
Confidence 1 2446899999987543210 124699999999888877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.+ .|+++..+-||.|--+... .................. + .. -+...+|+|++++.++-..
T Consensus 171 lA~ela~~gIrVN~V~PG~i~T~~~~------~~~~~~~~~~~~~~~~~~---~---~~--R~g~pediA~~v~fLaSd~ 236 (254)
T 4fn4_A 171 IAAHYGDQGIRAVAVLPGTVKTNIGL------GSSKPSELGMRTLTKLMS---L---SS--RLAEPEDIANVIVFLASDE 236 (254)
T ss_dssp HHHHHGGGTEEEEEEEECSBCSSCTT------SCSSCCHHHHHHHHHHHT---T---CC--CCBCHHHHHHHHHHHHSGG
T ss_pred HHHHhhhhCeEEEEEEeCCCCCcccc------cccCCcHHHHHHHHhcCC---C---CC--CCcCHHHHHHHHHHHhCch
Confidence 65 7899999999998554221 111111111111111110 1 01 1345789999999988543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... -.|+++++.+|
T Consensus 237 a~~----------------iTG~~i~VDGG 250 (254)
T 4fn4_A 237 ASF----------------VNGDAVVVDGG 250 (254)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hcC----------------CcCCEEEeCCC
Confidence 321 46889999877
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=98.58 E-value=2e-07 Score=102.34 Aligned_cols=149 Identities=9% Similarity=0.033 Sum_probs=104.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc------ccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH------IHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRCS 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~------vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~~ 343 (596)
.++.++.+|++++. .+..++.. +|+|||+||.... ...+...+.+|+.|+.+|.+++....
T Consensus 315 ~~v~~~~~Dvtd~~------~v~~~~~~i~~~g~id~vVh~AGv~~~~~~~~~~~~~~~~v~~~nv~g~~~L~~~~~~~~ 388 (525)
T 3qp9_A 315 ATATVVTCDLTDAE------AAARLLAGVSDAHPLSAVLHLPPTVDSEPLAATDADALARVVTAKATAALHLDRLLREAA 388 (525)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCTTTCCHHHHHHHHHHHHHHHHHHHHHHHHTC
T ss_pred CEEEEEECCCCCHH------HHHHHHHHHHhcCCCcEEEECCcCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHhcccc
Confidence 57999999999653 47777654 7999999997642 12355688999999999999998732
Q ss_pred ---C-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 344 ---Q-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 344 ---~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
+ ..+||++||++.+.... ....|+.+|...+.+...+
T Consensus 389 ~~~~~~~~iV~~SS~a~~~g~~---------------------------------------g~~~YaaaKa~l~~lA~~~ 429 (525)
T 3qp9_A 389 AAGGRPPVLVLFSSVAAIWGGA---------------------------------------GQGAYAAGTAFLDALAGQH 429 (525)
T ss_dssp ----CCCEEEEEEEGGGTTCCT---------------------------------------TCHHHHHHHHHHHHHHTSC
T ss_pred ccCCCCCEEEEECCHHHcCCCC---------------------------------------CCHHHHHHHHHHHHHHHHH
Confidence 1 68999999987643210 1246999999999987665
Q ss_pred h-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 420 L-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 420 ~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
. .|++++++.||.+-+ |.... ......+.. ..+..+..++++.++..++..
T Consensus 430 ~~~gi~v~sI~pG~~~t-------gm~~~----~~~~~~~~~-----------~g~~~l~pee~a~~l~~~l~~ 481 (525)
T 3qp9_A 430 RADGPTVTSVAWSPWEG-------SRVTE----GATGERLRR-----------LGLRPLAPATALTALDTALGH 481 (525)
T ss_dssp CSSCCEEEEEEECCBTT-------SGGGS----SHHHHHHHH-----------TTBCCBCHHHHHHHHHHHHHH
T ss_pred HhCCCCEEEEECCcccc-------ccccc----hhhHHHHHh-----------cCCCCCCHHHHHHHHHHHHhC
Confidence 5 899999999999822 21110 011111111 112457889999999988865
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.50 E-value=2.5e-06 Score=83.85 Aligned_cols=170 Identities=13% Similarity=0.059 Sum_probs=112.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCChh-----hhHHHHHHHHHHHHHHHHHHHHhc--CCCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRFD-----ELIQDAFTLNIQATRELLDLATRC--SQLK 346 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~~-----~~~~~~~~~NV~GT~~LL~~a~~~--~~vk 346 (596)
.++..+.+|++++. +++.+++ .+|++||+||..... ..++..+++|+.|+..+++++..+ .+-.
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~g~iDiLVNNAGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G 127 (242)
T 4b79_A 54 PRIRREELDITDSQ------RLQRLFEALPRLDVLVNNAGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGG 127 (242)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHCSCCSEEEECCCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCE
T ss_pred CCeEEEEecCCCHH------HHHHHHHhcCCCCEEEECCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCC
Confidence 57899999999753 4565554 689999999975422 235668899999999998887642 1236
Q ss_pred eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----c
Q psy5825 347 AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----Y 421 (596)
Q Consensus 347 rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~ 421 (596)
++|++||++...... ....|+.||+.-..+.+..+ .
T Consensus 128 ~IVnisS~~~~~~~~---------------------------------------~~~~Y~asKaav~~ltr~lA~Ela~~ 168 (242)
T 4b79_A 128 SILNIASMYSTFGSA---------------------------------------DRPAYSASKGAIVQLTRSLACEYAAE 168 (242)
T ss_dssp EEEEECCGGGTSCCS---------------------------------------SCHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred eEEEEeeccccCCCC---------------------------------------CCHHHHHHHHHHHHHHHHHHHHhhhc
Confidence 899999987543210 12469999999998887765 7
Q ss_pred CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCC
Q psy5825 422 KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVA 501 (596)
Q Consensus 422 gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~ 501 (596)
|+++..+-||.|--+.... +.........+.. . +|. --+...+|+|++++.++-.....
T Consensus 169 gIrVNaV~PG~i~T~m~~~-------~~~~~~~~~~~~~-~---~Pl-----gR~g~peeiA~~v~fLaSd~a~~----- 227 (242)
T 4b79_A 169 RIRVNAIAPGWIDTPLGAG-------LKADVEATRRIMQ-R---TPL-----ARWGEAPEVASAAAFLCGPGASF----- 227 (242)
T ss_dssp TEEEEEEEECSBCCC------------CCCHHHHHHHHH-T---CTT-----CSCBCHHHHHHHHHHHTSGGGTT-----
T ss_pred CeEEEEEEeCCCCChhhhc-------ccCCHHHHHHHHh-c---CCC-----CCCcCHHHHHHHHHHHhCchhcC-----
Confidence 8999999999996543211 1111122222222 1 121 12456789999999887543321
Q ss_pred CCCCcCCCCCCCCCCeEEccCC
Q psy5825 502 PPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 502 ~~~~~~~~~~~~~~~vyni~~~ 523 (596)
-.|+++++.+|
T Consensus 228 -----------iTG~~l~VDGG 238 (242)
T 4b79_A 228 -----------VTGAVLAVDGG 238 (242)
T ss_dssp -----------CCSCEEEESTT
T ss_pred -----------ccCceEEECcc
Confidence 36889998776
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.47 E-value=5.2e-06 Score=83.15 Aligned_cols=172 Identities=12% Similarity=0.046 Sum_probs=111.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. +++.++ ..+|++||+||...+ ...++..+++|+.|+..+++++..
T Consensus 75 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~ 148 (273)
T 4fgs_A 75 GGAVGIQADSANLA------ELDRLYEKVKAEAGRIDVLFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPL 148 (273)
T ss_dssp TTCEEEECCTTCHH------HHHHHHHHHHHHHSCEEEEEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTT
T ss_pred CCeEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 67889999999654 355443 358999999997532 134567899999999999999875
Q ss_pred cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 342 CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 342 ~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
+..-.++|++||++...... ....|+.||+.-..+.+..+
T Consensus 149 m~~~G~IInisS~~~~~~~~---------------------------------------~~~~Y~asKaav~~ltr~lA~ 189 (273)
T 4fgs_A 149 LARGSSVVLTGSTAGSTGTP---------------------------------------AFSVYAASKAALRSFARNWIL 189 (273)
T ss_dssp EEEEEEEEEECCGGGGSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred HhhCCeEEEEeehhhccCCC---------------------------------------CchHHHHHHHHHHHHHHHHHH
Confidence 22335899999986543210 12469999999998887765
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcH---HHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPG---GAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~---~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.|+++..+-||.|-.+..... .. ..+. .++..+.. .+|. . -+.-.+|+|++++.++-..
T Consensus 190 Ela~~gIrVN~V~PG~i~T~~~~~~---~~--~~~~~~~~~~~~~~~----~~Pl---g--R~g~peeiA~~v~FLaSd~ 255 (273)
T 4fgs_A 190 DLKDRGIRINTLSPGPTETTGLVEL---AG--KDPVQQQGLLNALAA----QVPM---G--RVGRAEEVAAAALFLASDD 255 (273)
T ss_dssp HTTTSCEEEEEEEECSBCC--------------CHHHHHHHHHHHHH----HSTT---S--SCBCHHHHHHHHHHHHSGG
T ss_pred HhcccCeEEEEEeeCCCCChhHHHh---hc--cCchhhHHHHHHHHh----cCCC---C--CCcCHHHHHHHHHHHhCch
Confidence 789999999999855422110 00 0000 11111111 1121 1 1455789999999988543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... -.|+++.+.+|
T Consensus 256 a~~----------------iTG~~i~VDGG 269 (273)
T 4fgs_A 256 SSF----------------VTGAELFVDGG 269 (273)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hcC----------------ccCCeEeECcC
Confidence 321 36889998877
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=98.46 E-value=1.4e-05 Score=79.40 Aligned_cols=170 Identities=10% Similarity=-0.042 Sum_probs=110.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-----------hhHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-----------ELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-----------~~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+|++++. ++..++ ..+|++||+|+..... ..+...+.+|+.++..+..+
T Consensus 58 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 131 (256)
T 4fs3_A 58 PEAHLYQIDVQSDE------EVINGFEQIGKDVGNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHE 131 (256)
T ss_dssp SSCEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHH
Confidence 47889999999653 344443 4689999999975321 12334678899999988888
Q ss_pred HHhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 339 ATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 339 a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
+... ..-.++|++||++...... ....|+.||+.-..+.+
T Consensus 132 ~~~~~~~~G~IVnisS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltr 172 (256)
T 4fs3_A 132 AKKLMPEGGSIVATTYLGGEFAVQ---------------------------------------NYNVMGVAKASLEANVK 172 (256)
T ss_dssp HHTTCTTCEEEEEEECGGGTSCCT---------------------------------------TTHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCEEEEEeccccccCcc---------------------------------------cchhhHHHHHHHHHHHH
Confidence 7652 2346899999987542110 12469999999988887
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+ +|+++..+-||.|-.+... .......++..+.. . .|. . -+...+|+|++++.++-.
T Consensus 173 ~lA~Ela~~gIrVN~V~PG~i~T~~~~-------~~~~~~~~~~~~~~-~---~Pl---~--R~g~peevA~~v~fL~Sd 236 (256)
T 4fs3_A 173 YLALDLGPDNIRVNAISAGPIRTLSAK-------GVGGFNTILKEIKE-R---APL---K--RNVDQVEVGKTAAYLLSD 236 (256)
T ss_dssp HHHHHHGGGTEEEEEEEECCCCSGGGT-------TCTTHHHHHHHHHH-H---STT---S--SCCCHHHHHHHHHHHHSG
T ss_pred HHHHHhCccCeEEEEEecCCCCChhhh-------hccCCHHHHHHHHh-c---CCC---C--CCcCHHHHHHHHHHHhCc
Confidence 655 7899999999998554321 11112222222222 1 121 1 145578999999988854
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... -.|+++.+.+|
T Consensus 237 ~a~~----------------iTG~~i~VDGG 251 (256)
T 4fs3_A 237 LSSG----------------VTGENIHVDSG 251 (256)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred hhcC----------------ccCCEEEECcC
Confidence 3321 36889998776
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.44 E-value=1.4e-05 Score=78.96 Aligned_cols=162 Identities=12% Similarity=0.113 Sum_probs=109.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|++||+|+.... ...++..+++|+.|+..+.++|...
T Consensus 47 ~~~~~~~~Dv~~~~------~v~~~v~~~~~~~g~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~ 120 (247)
T 3ged_A 47 PNLFYFHGDVADPL------TLKKFVEYAMEKLQRIDVLVNNACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDE 120 (247)
T ss_dssp TTEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCEEEEEecCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57889999999754 344443 468999999987542 1345678999999999999888641
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+-.++|++||+..+.... ....|+.||+.-..+.+..+
T Consensus 121 m~~~~G~IInisS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk~lA 161 (247)
T 3ged_A 121 LIKNKGRIINIASTRAFQSEP---------------------------------------DSEAYASAKGGIVALTHALA 161 (247)
T ss_dssp HHHTTCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCcEEEEeecccccCCC---------------------------------------CCHHHHHHHHHHHHHHHHHH
Confidence 1236899999987643210 12469999999998887766
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
+++.+..+-||.|--+... .+ ... ... . +|. --+...+|+|++++.++... .
T Consensus 162 ~ela~~IrVN~I~PG~i~t~~~~-------~~--~~~----~~~-~---~Pl-----~R~g~pediA~~v~fL~s~~-~- 217 (247)
T 3ged_A 162 MSLGPDVLVNCIAPGWINVTEQQ-------EF--TQE----DCA-A---IPA-----GKVGTPKDISNMVLFLCQQD-F- 217 (247)
T ss_dssp HHHTTTSEEEEEEECSBCCCC----------C--CHH----HHH-T---STT-----SSCBCHHHHHHHHHHHHHCS-S-
T ss_pred HHHCCCCEEEEEecCcCCCCCcH-------HH--HHH----HHh-c---CCC-----CCCcCHHHHHHHHHHHHhCC-C-
Confidence 7899999999988433210 00 111 111 1 121 11456789999999988421 1
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
-.|+++++.+|
T Consensus 218 ----------------iTG~~i~VDGG 228 (247)
T 3ged_A 218 ----------------ITGETIIVDGG 228 (247)
T ss_dssp ----------------CCSCEEEESTT
T ss_pred ----------------CCCCeEEECcC
Confidence 36899999887
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.42 E-value=4.2e-06 Score=83.00 Aligned_cols=170 Identities=9% Similarity=0.037 Sum_probs=111.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++ ..+|++||+||.... ...++..+++|+.|+..+++++..
T Consensus 58 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~ 131 (255)
T 4g81_D 58 YDAHGVAFDVTDEL------AIEAAFSKLDAEGIHVDILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKR 131 (255)
T ss_dssp CCEEECCCCTTCHH------HHHHHHHHHHHTTCCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 57889999999754 355544 358999999997542 134567899999999999988753
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
+ .+-.++|++||++...... ....|+.||+.-..+.+.
T Consensus 132 m~~~~~~G~IVnisS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltr~ 172 (255)
T 4g81_D 132 MIARNSGGKIINIGSLTSQAARP---------------------------------------TVAPYTAAKGGIKMLTCS 172 (255)
T ss_dssp HHHHTCCEEEEEECCGGGTSBCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHHccCCCEEEEEeehhhcCCCC---------------------------------------CchhHHHHHHHHHHHHHH
Confidence 1 3456999999987653211 124699999999988877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.+ .|+++..+-||.|..+..... .....+ ....... +|. . -+...+|+|++++.++-..
T Consensus 173 lA~ela~~gIrVN~V~PG~i~T~~~~~~-------~~~~~~-~~~~~~~---~Pl---~--R~g~pediA~~v~fL~S~~ 236 (255)
T 4g81_D 173 MAAEWAQFNIQTNAIGPGYILTDMNTAL-------IEDKQF-DSWVKSS---TPS---Q--RWGRPEELIGTAIFLSSKA 236 (255)
T ss_dssp HHHHHGGGTEEEEEEEECSBCCGGGHHH-------HTCHHH-HHHHHHH---STT---C--SCBCGGGGHHHHHHHHSGG
T ss_pred HHHHhcccCeEEEEEeeCCCCCchhhcc-------cCCHHH-HHHHHhC---CCC---C--CCcCHHHHHHHHHHHhCch
Confidence 65 789999999999965422100 000111 1111111 111 1 1344578999998887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... -.|+++++.+|
T Consensus 237 a~~----------------iTG~~i~VDGG 250 (255)
T 4g81_D 237 SDY----------------INGQIIYVDGG 250 (255)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hCC----------------CcCCEEEECCC
Confidence 321 46889998876
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=98.41 E-value=6.4e-06 Score=81.15 Aligned_cols=170 Identities=9% Similarity=0.032 Sum_probs=111.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-c---C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR-C---S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~-~---~ 343 (596)
.++.++.+|++++.. ...++ .++|++||+||.... ...++..+++|+.|+..+++++.. + .
T Consensus 56 ~~~~~~~~Dv~d~~~------v~~~~~~g~iDiLVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g 129 (247)
T 4hp8_A 56 GNASALLIDFADPLA------AKDSFTDAGFDILVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKG 129 (247)
T ss_dssp CCEEEEECCTTSTTT------TTTSSTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHT
T ss_pred CcEEEEEccCCCHHH------HHHHHHhCCCCEEEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhC
Confidence 578899999998764 22232 368999999997542 134567899999999999987653 2 2
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--- 420 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--- 420 (596)
+-.++|++||++...... ....|+.||..-..|.+..+
T Consensus 130 ~~G~IVnisS~~~~~g~~---------------------------------------~~~~Y~asKaav~~ltr~lA~El 170 (247)
T 4hp8_A 130 RSGKVVNIASLLSFQGGI---------------------------------------RVPSYTAAKHGVAGLTKLLANEW 170 (247)
T ss_dssp CCEEEEEECCGGGTSCCS---------------------------------------SCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEEEechhhCCCCC---------------------------------------CChHHHHHHHHHHHHHHHHHHHH
Confidence 346899999987543210 12469999999998887765
Q ss_pred --cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 421 --YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 421 --~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
+|+++..+-||.|--+.... +.........+.. .+|. --+-..+|+|.+++.++-.....
T Consensus 171 a~~gIrVNaV~PG~i~T~~~~~-------~~~~~~~~~~~~~----~~Pl-----gR~g~peeiA~~v~fLaSd~a~~-- 232 (247)
T 4hp8_A 171 AAKGINVNAIAPGYIETNNTEA-------LRADAARNKAILE----RIPA-----GRWGHSEDIAGAAVFLSSAAADY-- 232 (247)
T ss_dssp GGGTEEEEEEEECSBCSGGGHH-------HHTSHHHHHHHHT----TCTT-----SSCBCTHHHHHHHHHHTSGGGTT--
T ss_pred hhcCeEEEEEeeCCCCCcchhh-------cccCHHHHHHHHh----CCCC-----CCCcCHHHHHHHHHHHhCchhcC--
Confidence 78999999999985432110 0000111111111 1121 11345689999999887543321
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
-.|+++.+.+|
T Consensus 233 --------------iTG~~i~VDGG 243 (247)
T 4hp8_A 233 --------------VHGAILNVDGG 243 (247)
T ss_dssp --------------CCSCEEEESTT
T ss_pred --------------CcCCeEEECcc
Confidence 36889998876
|
| >2ptg_A Enoyl-acyl carrier reductase; apicomplexa, enoyl (acyl-carrier-P reductase, oxidoreductase; 2.60A {Eimeria tenella} | Back alignment and structure |
|---|
Probab=98.34 E-value=7.8e-07 Score=91.29 Aligned_cols=157 Identities=14% Similarity=-0.021 Sum_probs=82.9
Q ss_pred ccccEEEEcCccCC-----hh----hhHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEecCcccccCCccccccccCCCC
Q psy5825 303 HHIHVIIHAAASLR-----FD----ELIQDAFTLNIQATRELLDLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLF 372 (596)
Q Consensus 303 ~~vd~ViH~AA~v~-----~~----~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~ 372 (596)
..+|+|||+||... +. ..+...+.+|+.|+.++++++... ....+||++||++.+....
T Consensus 132 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------- 200 (319)
T 2ptg_A 132 GQIDILVHSLANGPEVTKPLLQTSRKGYLAAVSSSSYSFVSLLQHFLPLMKEGGSALALSYIASEKVIP----------- 200 (319)
T ss_dssp SCEEEEEEEEECCSSSSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEEECC-----------------
T ss_pred CCCCEEEECCccCCCCCCccccCCHHHHHHHHhHhhHHHHHHHHHHHHHHhcCceEEEEeccccccccC-----------
Confidence 36899999998541 11 234568899999999999999862 1126899999987543100
Q ss_pred ChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh------cCCCEEEecCCccccCCCCCccccCC
Q psy5825 373 SYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL------YKLPLAMVRPSIVVSTWKEPIVGWSN 446 (596)
Q Consensus 373 ~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~------~gl~~~IlRp~~V~G~~~~p~~G~~~ 446 (596)
. +...|+.||+..+.+++.++ .|+.+++++||.|..+.......
T Consensus 201 --------------------------~-~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~~~~~--- 250 (319)
T 2ptg_A 201 --------------------------G-YGGGMSSAKAALESDCRTLAFEAGRARAVRVNCISAGPLKSRAASAIGK--- 250 (319)
T ss_dssp ---------------------------------------THHHHHHHHHHHHHHHCCEEEEEEECCCC------------
T ss_pred --------------------------c-cchhhHHHHHHHHHHHHHHHHHhccccCeeEEEEeeCCccChhhhhccc---
Confidence 0 11359999999988887654 38999999999996643211000
Q ss_pred CCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 447 NLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 447 ~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.....+...+........| ..-+...+++|++++.++...... ..|+++++.+|
T Consensus 251 --~~~~~~~~~~~~~~~~~~p-----~~r~~~peevA~~v~~L~s~~~~~----------------itG~~i~vdGG 304 (319)
T 2ptg_A 251 --AGDKTFIDLAIDYSEANAP-----LQKELESDDVGRAALFLLSPLARA----------------VTGATLYVDNG 304 (319)
T ss_dssp -----------------------------CCCHHHHHHHHHHHTSGGGTT----------------CCSCEEEESTT
T ss_pred --ccchhhHHHHHHHHhccCC-----CCCCCCHHHHHHHHHHHhCcccCC----------------ccCCEEEECCC
Confidence 0000000000000000011 113567899999999887543221 36889998877
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=98.29 E-value=2.5e-06 Score=95.57 Aligned_cols=106 Identities=10% Similarity=0.030 Sum_probs=73.3
Q ss_pred EeccCCCCCCCCHHHHHHHhc-------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh---cCCC
Q psy5825 283 SGDISQPSLGISSHDQQFIQH-------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR---CSQL 345 (596)
Q Consensus 283 ~GDl~~~~lGL~~~~~~~l~~-------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~---~~~v 345 (596)
.+|+++.. ++..+++ .+|+|||+||.... ...+...+++|+.|+.+|++++.. ..+.
T Consensus 80 ~~D~~d~~------~~~~~~~~~~~~~g~iDiLVnnAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~l~~~~~p~m~~~~~ 153 (613)
T 3oml_A 80 VADYNSVI------DGAKVIETAIKAFGRVDILVNNAGILRDRSLVKTSEQDWNLVNDVHLKGSFKCTQAAFPYMKKQNY 153 (613)
T ss_dssp EECCCCGG------GHHHHHC----------CEECCCCCCCCCCSTTCCHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred EEEeCCHH------HHHHHHHHHHHHCCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCC
Confidence 36777653 2444443 68999999997642 124566889999999999999843 1345
Q ss_pred ceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----
Q psy5825 346 KAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----- 420 (596)
Q Consensus 346 krfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----- 420 (596)
.+||++||++.+.... ....|+.||++.+.+.+.++
T Consensus 154 g~IV~isS~a~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~la~e~~~ 194 (613)
T 3oml_A 154 GRIIMTSSNSGIYGNF---------------------------------------GQVNYTAAKMGLIGLANTVAIEGAR 194 (613)
T ss_dssp EEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGG
T ss_pred CEEEEECCHHHcCCCC---------------------------------------CChHHHHHHHHHHHHHHHHHHHhCc
Confidence 7999999986542100 12469999999999988765
Q ss_pred cCCCEEEecCCcc
Q psy5825 421 YKLPLAMVRPSIV 433 (596)
Q Consensus 421 ~gl~~~IlRp~~V 433 (596)
.|+.++++.||.+
T Consensus 195 ~gI~vn~v~Pg~~ 207 (613)
T 3oml_A 195 NNVLCNVIVPTAA 207 (613)
T ss_dssp GTEEEEEEEEC--
T ss_pred cCeEEEEEECCCC
Confidence 6899999999865
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=98.27 E-value=4e-06 Score=86.43 Aligned_cols=121 Identities=13% Similarity=0.097 Sum_probs=83.6
Q ss_pred CcEEEEEeccCCCCCC-CCHH-------------HHHHHh-------ccccEEEEcCccCC-----h----hhhHHHHHH
Q psy5825 277 RKVHIISGDISQPSLG-ISSH-------------DQQFIQ-------HHIHVIIHAAASLR-----F----DELIQDAFT 326 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lG-L~~~-------------~~~~l~-------~~vd~ViH~AA~v~-----~----~~~~~~~~~ 326 (596)
..+.++.+|+++.... ++.+ ++..++ ..+|++||+||... + ...+...+.
T Consensus 65 ~~~~~~~~Dv~~~~~~~~~~~~~~~~~~Dlsd~~~v~~~~~~~~~~~g~iDilVnnAGi~~~~~~~~~~~~~~~~~~~~~ 144 (329)
T 3lt0_A 65 NILDMLPFDASFDTANDIDEETKNNKRYNMLQNYTIEDVANLIHQKYGKINMLVHSLANAKEVQKDLLNTSRKGYLDALS 144 (329)
T ss_dssp CEEEEEECCTTCSSGGGCCHHHHTSHHHHTCCSCSHHHHHHHHHHHHCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHH
T ss_pred cccccccccccccchhhhhhhhcccccccccCHHHHHHHHHHHHHhcCCCcEEEECCcccccCCCCcccCCHHHHHHHHH
Confidence 3478899999977221 1111 233332 36899999999631 1 123556899
Q ss_pred HHHHHHHHHHHHHHhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCc-h
Q psy5825 327 LNIQATRELLDLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNN-S 404 (596)
Q Consensus 327 ~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~-~ 404 (596)
+|+.|+.+|++++... ..-.+||++||.+.+.... ... .
T Consensus 145 vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~~ 185 (329)
T 3lt0_A 145 KSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP---------------------------------------GYGGG 185 (329)
T ss_dssp HHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT---------------------------------------TCTTT
T ss_pred HHhHHHHHHHHHHHHHHhhCCeEEEEeCccccCCCC---------------------------------------cchHH
Confidence 9999999999998762 1115899999987543210 112 6
Q ss_pred HHHHHHHHHHHHHHHh----c--CCCEEEecCCccccC
Q psy5825 405 YSFTKAIGESVVEKYL----Y--KLPLAMVRPSIVVST 436 (596)
Q Consensus 405 Y~~SK~~aE~lv~~~~----~--gl~~~IlRp~~V~G~ 436 (596)
|+.||++.+.+....+ + |+.+..+.||.|..+
T Consensus 186 Y~asKaal~~~~~~la~el~~~~gI~vn~v~PG~v~T~ 223 (329)
T 3lt0_A 186 MSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLKSR 223 (329)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHhCCccCeEEEEEecceeech
Confidence 9999999998887654 4 899999999999654
|
| >2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A* | Back alignment and structure |
|---|
Probab=98.26 E-value=3.5e-06 Score=86.26 Aligned_cols=156 Identities=13% Similarity=-0.010 Sum_probs=96.9
Q ss_pred ccccEEEEcCccCC-----hh----hhHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEecCcccccCCccccccccCCCC
Q psy5825 303 HHIHVIIHAAASLR-----FD----ELIQDAFTLNIQATRELLDLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLF 372 (596)
Q Consensus 303 ~~vd~ViH~AA~v~-----~~----~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~ 372 (596)
..+|+|||+||... +. ..+...+.+|+.|+.++++++... ....+||++||.+.+....
T Consensus 119 g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~~~~~~----------- 187 (315)
T 2o2s_A 119 GNIDILVHSLANGPEVTKPLLETSRKGYLAASSNSAYSFVSLLQHFGPIMNEGGSAVTLSYLAAERVVP----------- 187 (315)
T ss_dssp CSEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHSTTEEEEEEEEEEEEGGGTSCCT-----------
T ss_pred CCCCEEEECCccCCcCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhcCCEEEEEecccccccCC-----------
Confidence 36899999998542 11 234568899999999999999752 1125899999987643210
Q ss_pred ChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh------cCCCEEEecCCccccCCCCCccccCC
Q psy5825 373 SYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL------YKLPLAMVRPSIVVSTWKEPIVGWSN 446 (596)
Q Consensus 373 ~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~------~gl~~~IlRp~~V~G~~~~p~~G~~~ 446 (596)
. +...|+.||+..+.+.+.++ .|+.+++++||.|..+... .+..
T Consensus 188 --------------------------~-~~~~Y~asKaal~~l~~~la~el~~~~gIrvn~v~PG~v~T~~~~---~~~~ 237 (315)
T 2o2s_A 188 --------------------------G-YGGGMSSAKAALESDTRTLAWEAGQKYGVRVNAISAGPLKSRAAS---AIGK 237 (315)
T ss_dssp --------------------------T-CCTTHHHHHHHHHHHHHHHHHHHHHHTCCEEEEEEECCCCCHHHH---HTTC
T ss_pred --------------------------C-ccHHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEecccccchhhh---hccc
Confidence 0 11359999999998887654 4899999999998554211 0000
Q ss_pred C-CCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 447 N-LYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 447 ~-~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. .......+....... .|. .-+...+++|++++.++...... ..|+++.+.+|
T Consensus 238 ~~~~~~~~~~~~~~~~~---~p~-----~r~~~pedvA~~v~~L~s~~~~~----------------itG~~i~vdGG 291 (315)
T 2o2s_A 238 SGEKSFIDYAIDYSYNN---APL-----RRDLHSDDVGGAALFLLSPLARA----------------VSGVTLYVDNG 291 (315)
T ss_dssp SSSSCHHHHHHHHHHHH---SSS-----CCCCCHHHHHHHHHHHTSGGGTT----------------CCSCEEEESTT
T ss_pred cccchhHHHHHHHHhcc---CCC-----CCCCCHHHHHHHHHHHhCchhcc----------------CcCCEEEECCC
Confidence 0 000001111111111 111 12567899999999887543221 36888888877
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.9e-05 Score=78.66 Aligned_cols=114 Identities=14% Similarity=0.165 Sum_probs=80.9
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC-----hh----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR-----FD----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~-----~~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
...++.+|++++. ++..++ ..+|++||+||... +. ..+...+++|+.|+.++++++..
T Consensus 51 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p 124 (261)
T 4h15_A 51 EELFVEADLTTKE------GCAIVAEATRQRLGGVDVIVHMLGGSSAAGGGFSALSDDDWYNELSLNLFAAVRLDRQLVP 124 (261)
T ss_dssp TTTEEECCTTSHH------HHHHHHHHHHHHTSSCSEEEECCCCCCCCSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred cEEEEEcCCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCccCCCCcccCCHHHHHHHHHHHhHHHHHHHHhhch
Confidence 3457889998654 344443 35899999998642 11 23566889999999999888764
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+-.++|++||+....... . ....|+.||+.-..+.+.
T Consensus 125 ~m~~~~~G~Iv~isS~~~~~~~~-------------------------------------~-~~~~Y~asKaal~~lt~~ 166 (261)
T 4h15_A 125 DMVARGSGVVVHVTSIQRVLPLP-------------------------------------E-STTAYAAAKAALSTYSKA 166 (261)
T ss_dssp HHHHHTCEEEEEECCGGGTSCCT-------------------------------------T-TCHHHHHHHHHHHHHHHH
T ss_pred hhhhcCCceEEEEEehhhccCCC-------------------------------------C-ccHHHHHHHHHHHHHHHH
Confidence 1 2456899999987542100 0 124699999999988877
Q ss_pred Hh-----cCCCEEEecCCcccc
Q psy5825 419 YL-----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G 435 (596)
.+ .|+++..+-||.|--
T Consensus 167 lA~Ela~~gIrVN~V~PG~i~T 188 (261)
T 4h15_A 167 MSKEVSPKGVRVVRVSPGWIET 188 (261)
T ss_dssp HHHHHGGGTEEEEEEEECCBCC
T ss_pred HHHHhhhhCeEEEEEeCCCcCC
Confidence 65 789999999998843
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=98.01 E-value=1.5e-05 Score=91.74 Aligned_cols=111 Identities=14% Similarity=0.184 Sum_probs=85.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhcC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRCS 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~~ 343 (596)
.++.++.+|+++. +++..+++ .+|+|||+|+.... ...+...+.+|+.|+.+|.+++..
T Consensus 584 ~~v~~~~~Dvsd~------~~v~~~~~~~~~~~~id~lVnnAGv~~~~~~~~~t~e~~~~~~~~nv~G~~~l~~~~~~-- 655 (795)
T 3slk_A 584 AEVSLQACDVADR------ETLAKVLASIPDEHPLTAVVHAAGVLDDGVSESLTVERLDQVLRPKVDGARNLLELIDP-- 655 (795)
T ss_dssp CEEEEEECCTTCH------HHHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHHCCCCCHHHHHHHHSCT--
T ss_pred CcEEEEEeecCCH------HHHHHHHHHHHHhCCCEEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHhh--
Confidence 5789999999964 44666664 47999999997642 123556888999999999999843
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cC
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YK 422 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~g 422 (596)
.. .||++||++.+.... ....|+.+|...+.+..... .|
T Consensus 656 ~l-~iV~~SS~ag~~g~~---------------------------------------g~~~YaAaka~~~alA~~~~~~G 695 (795)
T 3slk_A 656 DV-ALVLFSSVSGVLGSG---------------------------------------GQGNYAAANSFLDALAQQRQSRG 695 (795)
T ss_dssp TS-EEEEEEETHHHHTCS---------------------------------------SCHHHHHHHHHHHHHHHHHHHTT
T ss_pred CC-EEEEEccHHhcCCCC---------------------------------------CCHHHHHHHHHHHHHHHHHHHcC
Confidence 45 899999987532100 12469999999998888777 99
Q ss_pred CCEEEecCCcccc
Q psy5825 423 LPLAMVRPSIVVS 435 (596)
Q Consensus 423 l~~~IlRp~~V~G 435 (596)
++++.+-||.|-.
T Consensus 696 i~v~sI~pG~v~t 708 (795)
T 3slk_A 696 LPTRSLAWGPWAE 708 (795)
T ss_dssp CCEEEEEECCCSC
T ss_pred CeEEEEECCeECc
Confidence 9999999998743
|
| >2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=0.00011 Score=89.78 Aligned_cols=111 Identities=13% Similarity=0.081 Sum_probs=79.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-----------cccEEEEcCccCChh----------hhHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-----------HIHVIIHAAASLRFD----------ELIQDAFTLNIQATREL 335 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-----------~vd~ViH~AA~v~~~----------~~~~~~~~~NV~GT~~L 335 (596)
.++.++.+|+++.. ++..++. .+|+|||+||..... ..+..++.+|+.|+.++
T Consensus 707 ~~v~~v~~DVsd~e------sV~alv~~i~~~~~~~G~~IDiLVnNAGi~~~~~~l~d~t~~~e~~~~vl~vNv~g~~~l 780 (1878)
T 2uv9_A 707 SQLVVVPFNQGSKQ------DVEALVNYIYDTKNGLGWDLDYVVPFAAIPENGREIDSIDSKSELAHRIMLTNLLRLLGA 780 (1878)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHCSSSSCCCCCSEEEECCCCCCTTCCTTCCCHHHHHHHHHHTHHHHHHHHH
T ss_pred CeEEEEEcCCCCHH------HHHHHHHHHHHhhcccCCCCcEEEeCcccccCCCChhhcCcCHHHHHHHHHHHHHHHHHH
Confidence 47899999999653 3555442 589999999975332 33456889999999999
Q ss_pred HHHHHhcC-----CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHH
Q psy5825 336 LDLATRCS-----QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKA 410 (596)
Q Consensus 336 L~~a~~~~-----~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~ 410 (596)
+.++.... +..+||++||++.+.. ....|+.||+
T Consensus 781 ~~a~~~lp~M~~~~~G~IVnISS~ag~~g-----------------------------------------g~~aYaASKA 819 (1878)
T 2uv9_A 781 IKTQKKERGYETRPAQVILPLSPNHGTFG-----------------------------------------NDGLYSESKL 819 (1878)
T ss_dssp HHHHHHHHTCCSCCEEECCEECSCSSSSS-----------------------------------------CCSSHHHHHH
T ss_pred HHHHHHhHHHHhCCCCEEEEEcchhhccC-----------------------------------------CchHHHHHHH
Confidence 88743211 1258999999764321 1135999999
Q ss_pred HHHHHHHHHh-----cCCCEEEecCCccc
Q psy5825 411 IGESVVEKYL-----YKLPLAMVRPSIVV 434 (596)
Q Consensus 411 ~aE~lv~~~~-----~gl~~~IlRp~~V~ 434 (596)
..+.++..+. .++.++.+.||.|-
T Consensus 820 AL~aLt~~laAeEla~~IrVNaVaPG~V~ 848 (1878)
T 2uv9_A 820 ALETLFNRWYSESWGNYLTICGAVIGWTR 848 (1878)
T ss_dssp HHTTHHHHHHHSTTTTTEEEEEEEECCBC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEEeccee
Confidence 9999876543 34888999999886
|
| >2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00037 Score=85.31 Aligned_cols=112 Identities=14% Similarity=0.024 Sum_probs=80.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------------cccEEEEcCccCChh----------hhHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------------HIHVIIHAAASLRFD----------ELIQDAFTLNIQATR 333 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------------~vd~ViH~AA~v~~~----------~~~~~~~~~NV~GT~ 333 (596)
.++.++.+||++.. ++..+++ .+|+|||+||..... ..+..++.+|+.|+.
T Consensus 730 ~~v~~v~~DVsd~~------sV~alv~~i~~~~~~~G~G~~LDiLVNNAGi~~~~~~l~d~t~~~e~~~~v~~vNv~g~~ 803 (1887)
T 2uv8_A 730 STLIVVPFNQGSKQ------DVEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMM 803 (1887)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHSCTTTTSCCCCCSEEEECCCCCCCSBCGGGCCHHHHHHHHHHTHHHHHHH
T ss_pred CeEEEEEecCCCHH------HHHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCcchHHHHHHHHHHHHHHH
Confidence 46899999999654 3554432 589999999975322 234568899999999
Q ss_pred HHHHHHHhcCC-----CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHH
Q psy5825 334 ELLDLATRCSQ-----LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFT 408 (596)
Q Consensus 334 ~LL~~a~~~~~-----vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~S 408 (596)
+++.++...+. ..+||++||...+.. ....|+.|
T Consensus 804 ~l~~a~~~lp~m~~~~~G~IVnISS~ag~~g-----------------------------------------g~~aYaAS 842 (1887)
T 2uv8_A 804 GCVKKQKSARGIETRPAQVILPMSPNHGTFG-----------------------------------------GDGMYSES 842 (1887)
T ss_dssp HHHHHHHHTTTCCSCCEEEEEEECSCTTCSS-----------------------------------------CBTTHHHH
T ss_pred HHHHHHHhhhhhhhCCCCEEEEEcChHhccC-----------------------------------------CCchHHHH
Confidence 99998843222 258999999765321 01359999
Q ss_pred HHHHHHH-HHHHh----cCCCEEEecCCcccc
Q psy5825 409 KAIGESV-VEKYL----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 409 K~~aE~l-v~~~~----~gl~~~IlRp~~V~G 435 (596)
|+..+.+ ...++ ..+.++.+.||+|.|
T Consensus 843 KAAL~~Lttr~lA~ela~~IrVNaV~PG~V~t 874 (1887)
T 2uv8_A 843 KLSLETLFNRWHSESWANQLTVCGAIIGWTRG 874 (1887)
T ss_dssp HHHGGGHHHHHHHSSCTTTEEEEEEEECCEEC
T ss_pred HHHHHHHHHHHHHHHhCCCeEEEEEEeccccc
Confidence 9999998 44333 238899999999974
|
| >2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.00011 Score=87.43 Aligned_cols=112 Identities=13% Similarity=0.044 Sum_probs=79.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-------------cccEEEEcCccCChh----------hhHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-------------HIHVIIHAAASLRFD----------ELIQDAFTLNIQATR 333 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-------------~vd~ViH~AA~v~~~----------~~~~~~~~~NV~GT~ 333 (596)
.++.++.+|++++.. +..+++ .+|+|||+||..... ..+..++.+|+.|+.
T Consensus 531 a~V~vV~~DVTD~es------VeaLVe~I~e~~~~~GfG~~IDILVNNAGI~~~g~~l~dlt~s~Ed~~rv~~VNL~G~~ 604 (1688)
T 2pff_A 531 STLIVVPFNQGSKQD------VEALIEFIYDTEKNGGLGWDLDAIIPFAAIPEQGIELEHIDSKSEFAHRIMLTNILRMM 604 (1688)
T ss_dssp CEEEEEECCSSSTTH------HHHHHHHHHSCTTSSSCCCCCCEEECCCCCCCCSBCSSSCTTHHHHHHHHTTHHHHHHH
T ss_pred CeEEEEEeCCCCHHH------HHHHHHHHHHhccccccCCCCeEEEECCCcCCCCCChhhCCCCHHHHHHHHHHHHHHHH
Confidence 468899999998753 444432 489999999975322 234568899999999
Q ss_pred HHHHHHHhcCC-----CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHH
Q psy5825 334 ELLDLATRCSQ-----LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFT 408 (596)
Q Consensus 334 ~LL~~a~~~~~-----vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~S 408 (596)
++++++...+. ..+||++||.+.... ....|+.|
T Consensus 605 ~Ltqaa~~lp~M~krggGrIVnISSiAG~~G-----------------------------------------g~saYaAS 643 (1688)
T 2pff_A 605 GCVKKQKSARGIETRPAQVILPMSPNHGTFG-----------------------------------------GDGMYSES 643 (1688)
T ss_dssp HHHHHHHHHHTCTTSCEEECCCCCSCTTTSS-----------------------------------------CBTTHHHH
T ss_pred HHHHHHHhChHHHhCCCCEEEEEEChHhccC-----------------------------------------CchHHHHH
Confidence 99998832111 258999999764321 11359999
Q ss_pred HHHHHHHHHHHh-----cCCCEEEecCCcccc
Q psy5825 409 KAIGESVVEKYL-----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 409 K~~aE~lv~~~~-----~gl~~~IlRp~~V~G 435 (596)
|+..+.++.... ..+.++.+.||.|.|
T Consensus 644 KAAL~aLttrsLAeEla~~IRVNaVaPG~V~T 675 (1688)
T 2pff_A 644 KLSLETLFNRWHSESWANQLTVCGAIIGWTRG 675 (1688)
T ss_dssp HHHHTHHHHHTTTSSCTTTEECCCCCCCCCCC
T ss_pred HHHHHHHHHHHHHHHcCCCeEEEEEEECcCcC
Confidence 999999854432 237788889998874
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.06 E-value=0.002 Score=71.68 Aligned_cols=90 Identities=17% Similarity=0.135 Sum_probs=66.5
Q ss_pred ccccEEEEcCccCCh---h----hhHHHHHHHHHHHHHHHHHHHHhc---CCCceEEEecCcccccCCccccccccCCCC
Q psy5825 303 HHIHVIIHAAASLRF---D----ELIQDAFTLNIQATRELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLF 372 (596)
Q Consensus 303 ~~vd~ViH~AA~v~~---~----~~~~~~~~~NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~ 372 (596)
..+|++||+||.... . ..+...+++|+.|+.++++++... .+-.+||++||.+......
T Consensus 90 G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag~~~~~----------- 158 (604)
T 2et6_A 90 GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAGLYGNF----------- 158 (604)
T ss_dssp SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHHHHCCT-----------
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHHcCCCC-----------
Confidence 469999999997532 1 235668999999999999888641 2346899999976432100
Q ss_pred ChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCC
Q psy5825 373 SYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPS 431 (596)
Q Consensus 373 ~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~ 431 (596)
....|+.||+.-..+.+..+ .|+.+..+-|+
T Consensus 159 ----------------------------~~~~Y~asKaal~~lt~~la~El~~~gIrVn~v~Pg 194 (604)
T 2et6_A 159 ----------------------------GQANYASAKSALLGFAETLAKEGAKYNIKANAIAPL 194 (604)
T ss_dssp ----------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEEC
T ss_pred ----------------------------CchHHHHHHHHHHHHHHHHHHHhCccCeEEEEEccC
Confidence 11469999999998887765 68999999996
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=97.01 E-value=0.012 Score=61.54 Aligned_cols=117 Identities=15% Similarity=-0.008 Sum_probs=77.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccC----------------Ch----------------
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASL----------------RF---------------- 317 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v----------------~~---------------- 317 (596)
.++.++.+|++++. .+..++ ..+|++||+||.. .+
T Consensus 109 ~~a~~i~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVNNAG~~~r~~p~tG~~~~s~~~pig~~~~~~~~d~~~~~~ 182 (405)
T 3zu3_A 109 LYAKSINGDAFSDE------IKQLTIDAIKQDLGQVDQVIYSLASPRRTHPKTGEVFNSALKPIGNAVNLRGLDTDKEVI 182 (405)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHHTSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTEE
T ss_pred CceEEEECCCCCHH------HHHHHHHHHHHHcCCCCEEEEcCccccccCcccccccccccccccccccccccccccccc
Confidence 46888999999654 344443 3589999999863 11
Q ss_pred ---------hhhHHHHHHHHHHHHH-HHHHHHHhcC---CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcC
Q psy5825 318 ---------DELIQDAFTLNIQATR-ELLDLATRCS---QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTT 384 (596)
Q Consensus 318 ---------~~~~~~~~~~NV~GT~-~LL~~a~~~~---~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~ 384 (596)
...+...+.+|..|+. .++.++.... +-.++|.+||++......
T Consensus 183 ~~~~i~~~t~ee~~~~v~Vn~~~~~~~~~~~~~~~~m~~~gG~IVniSSi~~~~~~p----------------------- 239 (405)
T 3zu3_A 183 KESVLQPATQSEIDSTVAVMGGEDWQMWIDALLDAGVLAEGAQTTAFTYLGEKITHD----------------------- 239 (405)
T ss_dssp EEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHHTCEEEEEEEEEEECCCCGGGTT-----------------------
T ss_pred ccccCCCCCHHHHHHHHHhhchhHHHHHHHHHHHHhhhhCCcEEEEEeCchhhCcCC-----------------------
Confidence 1224456777877776 5555543211 125799999976432100
Q ss_pred ChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----c-CCCEEEecCCccccC
Q psy5825 385 NQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----Y-KLPLAMVRPSIVVST 436 (596)
Q Consensus 385 ~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~-gl~~~IlRp~~V~G~ 436 (596)
+. +...|+.||..-+.+.+..+ . |+++.++-||.|--+
T Consensus 240 -------------~~-~~~aY~AaKaal~~ltrsLA~Ela~~~GIRVNaVaPG~i~T~ 283 (405)
T 3zu3_A 240 -------------IY-WNGSIGAAKKDLDQKVLAIRESLAAHGGGDARVSVLKAVVSQ 283 (405)
T ss_dssp -------------TT-TTSHHHHHHHHHHHHHHHHHHHHHTTTSCEEEEEECCCCCCH
T ss_pred -------------Cc-cchHHHHHHHHHHHHHHHHHHHhCcccCeEEEEEEeCCCcCc
Confidence 00 12569999999999887765 6 899999999988554
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0027 Score=81.39 Aligned_cols=114 Identities=18% Similarity=0.180 Sum_probs=79.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-c
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR-C 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~-~ 342 (596)
.++.++.+|+++.. ++..++ ..+|+|||+|+..... ..+...+.+|+.|+.+|.+++.. +
T Consensus 1937 ~~v~~~~~Dvsd~~------~v~~~~~~~~~~g~id~lVnnAgv~~~~~~~~~t~e~~~~~~~~nv~g~~~l~~~~~~~~ 2010 (2512)
T 2vz8_A 1937 VQVLVSTSNASSLD------GARSLITEATQLGPVGGVFNLAMVLRDAVLENQTPEFFQDVSKPKYSGTANLDRVTREAC 2010 (2512)
T ss_dssp CEEEEECCCSSSHH------HHHHHHHHHHHHSCEEEEEECCCC----------------CTTTTHHHHHHHHHHHHHHC
T ss_pred CEEEEEecCCCCHH------HHHHHHHHHHhcCCCcEEEECCCcCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHhc
Confidence 46889999999653 344433 3589999999975321 12345678999999999888765 2
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-c
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-Y 421 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~ 421 (596)
....+||++||++...... ....|+.+|..-+.+.+... .
T Consensus 2011 ~~~g~iV~iSS~ag~~g~~---------------------------------------g~~~Y~aaKaal~~l~~~rr~~ 2051 (2512)
T 2vz8_A 2011 PELDYFVIFSSVSCGRGNA---------------------------------------GQANYGFANSAMERICEKRRHD 2051 (2512)
T ss_dssp TTCCEEEEECCHHHHTTCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHT
T ss_pred ccCCEEEEecchhhcCCCC---------------------------------------CcHHHHHHHHHHHHHHHHHHHC
Confidence 3457999999986532100 11469999999999998766 8
Q ss_pred CCCEEEecCCcccc
Q psy5825 422 KLPLAMVRPSIVVS 435 (596)
Q Consensus 422 gl~~~IlRp~~V~G 435 (596)
|++...+-+|.+.+
T Consensus 2052 Gl~~~a~~~g~~~~ 2065 (2512)
T 2vz8_A 2052 GLPGLAVQWGAIGD 2065 (2512)
T ss_dssp TSCCCEEEECCBCT
T ss_pred CCcEEEEEccCcCC
Confidence 99998888877644
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=96.96 E-value=0.014 Score=61.77 Aligned_cols=117 Identities=9% Similarity=-0.095 Sum_probs=74.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccC----------------Ch----------------
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASL----------------RF---------------- 317 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v----------------~~---------------- 317 (596)
.++.++.+|++++. .+..++ ..+|++||+||.. .+
T Consensus 123 ~~~~~~~~Dvtd~~------~v~~~v~~i~~~~G~IDiLVnNAG~~~r~~~~~g~~~~s~~~p~~~~~~~~~~d~~~~~~ 196 (418)
T 4eue_A 123 LVAKNFIEDAFSNE------TKDKVIKYIKDEFGKIDLFVYSLAAPRRKDYKTGNVYTSRIKTILGDFEGPTIDVERDEI 196 (418)
T ss_dssp CCEEEEESCTTCHH------HHHHHHHHHHHTTCCEEEEEECCCCSEEECTTTCCEEECCCCBSSSCEEEEEEETTTTEE
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCccccccccccccccccccccccccccccccccccccc
Confidence 56889999999653 344443 3589999999863 01
Q ss_pred ---------hhhHHHHHHHHHHHHH-HHHHHHHhcC---CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcC
Q psy5825 318 ---------DELIQDAFTLNIQATR-ELLDLATRCS---QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTT 384 (596)
Q Consensus 318 ---------~~~~~~~~~~NV~GT~-~LL~~a~~~~---~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~ 384 (596)
...+...+.+|..+.. .++..+.... +-.++|++||++.....
T Consensus 197 ~~~~~~~~t~e~~~~~~~vn~~~~~~~~~~~l~~~~~~~~gg~IV~iSSi~~~~~~------------------------ 252 (418)
T 4eue_A 197 TLKKVSSASIEEIEETRKVMGGEDWQEWCEELLYEDCFSDKATTIAYSYIGSPRTY------------------------ 252 (418)
T ss_dssp EEEEECBCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEECCCCGGGT------------------------
T ss_pred ccccccCCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhhcCCcEEEEEeCchhcCCC------------------------
Confidence 1123345555655554 4555554311 12478999987543210
Q ss_pred ChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----c--CCCEEEecCCccccC
Q psy5825 385 NQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----Y--KLPLAMVRPSIVVST 436 (596)
Q Consensus 385 ~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----~--gl~~~IlRp~~V~G~ 436 (596)
| .. +...|+.||..-+.+.+..+ + |+.+.++-||.|--+
T Consensus 253 ---------p---~~-~~~aY~ASKaAL~~ltrsLA~ELa~~~GIrVN~V~PG~v~T~ 297 (418)
T 4eue_A 253 ---------K---IY-REGTIGIAKKDLEDKAKLINEKLNRVIGGRAFVSVNKALVTK 297 (418)
T ss_dssp ---------T---TT-TTSHHHHHHHHHHHHHHHHHHHHHHHHSCEEEEEECCCCCCH
T ss_pred ---------C---cc-ccHHHHHHHHHHHHHHHHHHHHhCCccCeEEEEEECCcCcCh
Confidence 0 00 12579999999998887765 4 799999999998554
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0092 Score=62.91 Aligned_cols=117 Identities=12% Similarity=0.064 Sum_probs=75.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH-------h-ccccEEEEcCccC----------------Ch---------------
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI-------Q-HHIHVIIHAAASL----------------RF--------------- 317 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l-------~-~~vd~ViH~AA~v----------------~~--------------- 317 (596)
.++.++.+|++++. .+..+ + ..+|++||+||.. .+
T Consensus 123 ~~a~~i~~Dvtd~~------~v~~~v~~i~~~~~G~IDiLVNNAG~~~r~~p~~G~~~~~~~~p~~~~~~~~~~d~~~~~ 196 (422)
T 3s8m_A 123 LYSKSINGDAFSDA------ARAQVIELIKTEMGGQVDLVVYSLASPVRKLPGSGEVKRSALKPIGQTYTATAIDTNKDT 196 (422)
T ss_dssp CCEEEEESCTTSHH------HHHHHHHHHHHHSCSCEEEEEECCCCSEEECTTTCCEEECCCCCSSSCEEEEEEETTTTE
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCCCCEEEEcCcccccccccccccccccccccccccccccccccccc
Confidence 46888999999754 23333 3 5689999999862 11
Q ss_pred ----------hhhHHHHHHHHHHHHH-HHHHHHHhcC---CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhc
Q psy5825 318 ----------DELIQDAFTLNIQATR-ELLDLATRCS---QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQT 383 (596)
Q Consensus 318 ----------~~~~~~~~~~NV~GT~-~LL~~a~~~~---~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~ 383 (596)
...+...+.+|..|+. .++..+.... +-.++|.+||++.....
T Consensus 197 ~~~~~~~~~t~e~~~~~v~Vn~~~~~~~~~~a~~~~~m~~~gG~IVniSSi~g~~~~----------------------- 253 (422)
T 3s8m_A 197 IIQASIEPASAQEIEDTITVMGGQDWELWIDALEGAGVLADGARSVAFSYIGTEITW----------------------- 253 (422)
T ss_dssp EEEEEECCCCHHHHHHHHHHHSSHHHHHHHHHHHHTTCEEEEEEEEEEEECCCGGGH-----------------------
T ss_pred ccccccCCCCHHHHHHHHHhhchhHHHHHHHHHHHHHHhhCCCEEEEEeCchhhccC-----------------------
Confidence 0123345556655554 5566554311 12479999997643210
Q ss_pred CChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccC
Q psy5825 384 TNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 384 ~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~ 436 (596)
|. . +...|+.||..-+.+.+..+ .|+.+.++-||.|--+
T Consensus 254 ----------p~-~---~~~aY~ASKaAl~~lTrsLA~Ela~~GIRVNaVaPG~i~T~ 297 (422)
T 3s8m_A 254 ----------PI-Y---WHGALGKAKVDLDRTAQRLNARLAKHGGGANVAVLKSVVTQ 297 (422)
T ss_dssp ----------HH-H---TSHHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCT
T ss_pred ----------CC-c---cchHHHHHHHHHHHHHHHHHHHhCccCEEEEEEEcCCCcCh
Confidence 00 0 12469999999998887765 7899999999998554
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0035 Score=69.82 Aligned_cols=112 Identities=15% Similarity=0.100 Sum_probs=77.3
Q ss_pred CcEEEEEecc-CCCCCCCCHHHHHHH---hccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---
Q psy5825 277 RKVHIISGDI-SQPSLGISSHDQQFI---QHHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC--- 342 (596)
Q Consensus 277 ~rv~~v~GDl-~~~~lGL~~~~~~~l---~~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~--- 342 (596)
.++.++.+|+ .+.. ..++.+ +..+|++||+||..... ..+...+++|+.|+.++++++...
T Consensus 369 ~~~~~~~~Dv~~~~~-----~~~~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~ 443 (604)
T 2et6_A 369 GEAWPDQHDVAKDSE-----AIIKNVIDKYGTIDILVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVE 443 (604)
T ss_dssp CEEEEECCCHHHHHH-----HHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHH
T ss_pred CeEEEEEcChHHHHH-----HHHHHHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHH
Confidence 3566777888 4311 112332 34689999999975321 235668999999999999888641
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
.+-.+||++||.+...... ....|+.||+.-..+.+..+
T Consensus 444 ~~~G~IVnisS~ag~~~~~---------------------------------------~~~~Y~asKaal~~lt~~la~E 484 (604)
T 2et6_A 444 KQFGRIINITSTSGIYGNF---------------------------------------GQANYSSSKAGILGLSKTMAIE 484 (604)
T ss_dssp TTCEEEEEECCHHHHSCCT---------------------------------------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECChhhccCCC---------------------------------------CChhHHHHHHHHHHHHHHHHHH
Confidence 2346899999976432100 11469999999988887655
Q ss_pred ---cCCCEEEecCCc
Q psy5825 421 ---YKLPLAMVRPSI 432 (596)
Q Consensus 421 ---~gl~~~IlRp~~ 432 (596)
.|+.+..+-||.
T Consensus 485 l~~~gIrVn~v~PG~ 499 (604)
T 2et6_A 485 GAKNNIKVNIVAPHA 499 (604)
T ss_dssp HGGGTEEEEEEEECC
T ss_pred hCccCeEEEEEcCCC
Confidence 689999999983
|
| >1b8p_A Protein (malate dehydrogenase); oxidoreductase; 1.90A {Aquaspirillum arcticum} SCOP: c.2.1.5 d.162.1.1 PDB: 1b8u_A* 1b8v_A* 3d5t_A | Back alignment and structure |
|---|
Probab=95.75 E-value=0.019 Score=58.83 Aligned_cols=56 Identities=14% Similarity=-0.019 Sum_probs=44.6
Q ss_pred HHHHhccccEEEEcCccCC-hhhhHHHHHHHHHHHHHHHHHHHHhcC-CCceEEEecC
Q psy5825 298 QQFIQHHIHVIIHAAASLR-FDELIQDAFTLNIQATRELLDLATRCS-QLKAILHVST 353 (596)
Q Consensus 298 ~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~NV~GT~~LL~~a~~~~-~vkrfV~vSS 353 (596)
+..++.++|+|||+|+... ...+..+++..|+.++.++++.+.... .-.+||++|.
T Consensus 77 ~~~al~~aD~Vi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~~~p~a~ii~~SN 134 (329)
T 1b8p_A 77 PMTAFKDADVALLVGARPRGPGMERKDLLEANAQIFTVQGKAIDAVASRNIKVLVVGN 134 (329)
T ss_dssp HHHHTTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHHHSCTTCEEEECSS
T ss_pred cHHHhCCCCEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEccC
Confidence 6777899999999999764 234456788999999999999999853 2348888875
|
| >1smk_A Malate dehydrogenase, glyoxysomal; tricarboxylic cycle, glyoxysome, NAD, glyoxylate bypass, oxidoreductase; HET: CIT; 2.50A {Citrullus lanatus} PDB: 1sev_A | Back alignment and structure |
|---|
Probab=94.70 E-value=0.031 Score=57.10 Aligned_cols=59 Identities=19% Similarity=0.213 Sum_probs=46.7
Q ss_pred HHHHHHhccccEEEEcCccCC-hhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 296 HDQQFIQHHIHVIIHAAASLR-FDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 296 ~~~~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
.++..++.++|+|||+|+... ......+++..|+.++.++++.+.+. +...+|+++|.-
T Consensus 68 ~d~~~al~gaDvVi~~ag~~~~~g~~r~dl~~~N~~~~~~i~~~i~~~-~p~~~viv~SNP 127 (326)
T 1smk_A 68 QQLEAALTGMDLIIVPAGVPRKPGMTRDDLFKINAGIVKTLCEGIAKC-CPRAIVNLISNP 127 (326)
T ss_dssp HHHHHHHTTCSEEEECCCCCCCSSCCCSHHHHHHHHHHHHHHHHHHHH-CTTSEEEECCSS
T ss_pred CCHHHHcCCCCEEEEcCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHhh-CCCeEEEEECCc
Confidence 457788899999999999754 22333467899999999999999984 577888888743
|
| >1hye_A L-lactate/malate dehydrogenase; nucleotide binding domain, oxidoreductase; HET: NAP; 1.90A {Methanocaldococcus jannaschii} SCOP: c.2.1.5 d.162.1.1 PDB: 1hyg_A* | Back alignment and structure |
|---|
Probab=94.58 E-value=0.025 Score=57.48 Aligned_cols=56 Identities=14% Similarity=-0.028 Sum_probs=44.4
Q ss_pred HHHhccccEEEEcCccCC-hhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 299 QFIQHHIHVIIHAAASLR-FDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 299 ~~l~~~vd~ViH~AA~v~-~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
..++.++|+|||+|+... .......++..|+.++++++++|.+. + .++|+++|--|
T Consensus 69 ~~al~gaD~Vi~~Ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~~-~-~~~vlv~SNPv 125 (313)
T 1hye_A 69 LRIIDESDVVIITSGVPRKEGMSRMDLAKTNAKIVGKYAKKIAEI-C-DTKIFVITNPV 125 (313)
T ss_dssp GGGGTTCSEEEECCSCCCCTTCCHHHHHHHHHHHHHHHHHHHHHH-C-CCEEEECSSSH
T ss_pred HHHhCCCCEEEECCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh-C-CeEEEEecCcH
Confidence 345789999999999764 33445678999999999999999985 4 78888887533
|
| >1o6z_A MDH, malate dehydrogenase; halophilic, ION-binding, protein-solvent interaction, oxidoreductase; HET: NAD; 1.95A {Haloarcula marismortui} SCOP: c.2.1.5 d.162.1.1 PDB: 1gt2_A* 2x0r_A* 2j5k_A 2j5q_A 2j5r_A 1d3a_A 1hlp_A* 2hlp_A | Back alignment and structure |
|---|
Probab=93.75 E-value=0.078 Score=53.49 Aligned_cols=54 Identities=11% Similarity=-0.074 Sum_probs=43.6
Q ss_pred HhccccEEEEcCccCC-hhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 301 IQHHIHVIIHAAASLR-FDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 301 l~~~vd~ViH~AA~v~-~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
.+.++|+|||+|+... ......+++..|+.+++++++.+.+ .+...+|+++|.-
T Consensus 67 a~~~aDvVi~~ag~~~~~g~~r~dl~~~N~~i~~~i~~~i~~-~~p~~~viv~SNP 121 (303)
T 1o6z_A 67 DTAGSDVVVITAGIPRQPGQTRIDLAGDNAPIMEDIQSSLDE-HNDDYISLTTSNP 121 (303)
T ss_dssp GGTTCSEEEECCCCCCCTTCCHHHHHHHHHHHHHHHHHHHHT-TCSCCEEEECCSS
T ss_pred HhCCCCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH-HCCCcEEEEeCCh
Confidence 3689999999999764 2334556889999999999999998 4678888888753
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=92.10 E-value=0.85 Score=59.26 Aligned_cols=113 Identities=9% Similarity=0.137 Sum_probs=68.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH----hc-------cccEEEEcCcc----CC------------hhhhHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI----QH-------HIHVIIHAAAS----LR------------FDELIQDAFTLNI 329 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l----~~-------~vd~ViH~AA~----v~------------~~~~~~~~~~~NV 329 (596)
.++.++.+|++++. ++..+ .. .+|++||+||. .. +....+..+.+|+
T Consensus 2191 ~~~~~v~~Dvtd~~------~v~~lv~~i~~~~~~~fG~IDILVNNAGi~d~~~~~a~~~~~~~~e~~~~~~e~~~~vnl 2264 (3089)
T 3zen_D 2191 ATLWVVPANMASYS------DIDKLVEWVGTEQTESLGPQSIHLKDAQTPTLLFPFAAPRVAGDMSEVGSRAEMEMKVLL 2264 (3089)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHTSCCEEEESSSEEEECCCCCCSEEEECCCCCCCCTTSCTTSHHHHHHHHHT
T ss_pred CeEEEEEecCCCHH------HHHHHHHHHHhhhhhhcCCCCEEEECCCcccccCcccccccCCCHHHHHHHHHHHHHHHH
Confidence 46888999999653 35544 22 47999999997 21 1112334578999
Q ss_pred HHHHHHHHHHHhc---CCCc---eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCc
Q psy5825 330 QATRELLDLATRC---SQLK---AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNN 403 (596)
Q Consensus 330 ~GT~~LL~~a~~~---~~vk---rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~ 403 (596)
.++..++.++... .+.. .+|...| ...+.. + ...
T Consensus 2265 ~~~~~l~~~~~~~m~~~~~g~~~~ii~~~s-s~~g~~-------------------------------------g--~~~ 2304 (3089)
T 3zen_D 2265 WAVQRLISGLSKIGAERDIASRLHVVLPGS-PNRGMF-------------------------------------G--GDG 2304 (3089)
T ss_dssp HHHHHHHHHHHHHHHHTTCCCCEEEEEEEC-SSTTSC-------------------------------------S--SCS
T ss_pred HHHHHHHHHHHHHHHHcCCCceeEEEEECC-cccccC-------------------------------------C--Cch
Confidence 9998888877541 1111 1111111 111100 0 113
Q ss_pred hHHHHHHHHHHHHHHHh-c-----CCCEEEecCCcccc
Q psy5825 404 SYSFTKAIGESVVEKYL-Y-----KLPLAMVRPSIVVS 435 (596)
Q Consensus 404 ~Y~~SK~~aE~lv~~~~-~-----gl~~~IlRp~~V~G 435 (596)
.|+.||+.-..+.+.++ . ++.++.+-||.|-+
T Consensus 2305 aYsASKaAl~~LtrslA~E~~~a~~IrVn~v~PG~v~t 2342 (3089)
T 3zen_D 2305 AYGEAKSALDALENRWSAEKSWAERVSLAHALIGWTKG 2342 (3089)
T ss_dssp SHHHHGGGHHHHHHHHHHCSTTTTTEEEEEEECCCEEC
T ss_pred HHHHHHHHHHHHHHHHHhccccCCCeEEEEEeecccCC
Confidence 59999999999887766 3 46677778887754
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=91.01 E-value=0.19 Score=42.06 Aligned_cols=57 Identities=12% Similarity=-0.039 Sum_probs=40.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLY 355 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~ 355 (596)
..+.++.+|+.++ ..+..++.++|+||||++.. .+.+++++|.. .++..|.+.+++.
T Consensus 48 ~~~~~~~~d~~~~------~~~~~~~~~~d~vi~~~~~~---------------~~~~~~~~~~~-~g~~~~~~~~~~~ 104 (118)
T 3ic5_A 48 MGVATKQVDAKDE------AGLAKALGGFDAVISAAPFF---------------LTPIIAKAAKA-AGAHYFDLTEDVA 104 (118)
T ss_dssp TTCEEEECCTTCH------HHHHHHTTTCSEEEECSCGG---------------GHHHHHHHHHH-TTCEEECCCSCHH
T ss_pred CCCcEEEecCCCH------HHHHHHHcCCCEEEECCCch---------------hhHHHHHHHHH-hCCCEEEecCcHH
Confidence 4677888998853 45788889999999999532 14678888888 5676665544443
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 596 | ||||
| d1kewa_ | 361 | c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) { | 5e-06 | |
| d1sa0e_ | 138 | a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus | 1e-05 | |
| d1sa0e_ | 138 | a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus | 0.003 | |
| d1db3a_ | 357 | c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escheric | 0.002 |
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} Length = 361 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Score = 46.7 bits (110), Expect = 5e-06
Identities = 35/193 (18%), Positives = 61/193 (31%), Gaps = 34/193 (17%)
Query: 266 RLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQD-- 323
L++ + + DI + + F Q+ ++H AA D I
Sbjct: 39 NLESLSDISESNRYNFEHADICDSA----EITRIFEQYQPDAVMHLAAESHVDRSITGPA 94
Query: 324 -AFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQ 382
NI T LL++A + + H D E Y L +++ + +
Sbjct: 95 AFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTD---EVYGDLPHPDEVENSVT 151
Query: 383 TTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY--LYKLPLAMVRPSIVVSTWKEP 440
E + ++ YS +KA + +V + Y LP + S
Sbjct: 152 LPLFTETTAYAP-------SSPYSASKASSDHLVRAWRRTYGLPTIVTNCS--------- 195
Query: 441 IVGWSNNLYGPGG 453
N YGP
Sbjct: 196 ------NNYGPYH 202
|
| >d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Non-globular all-alpha subunits of globular proteins superfamily: Stathmin family: Stathmin domain: Stathmin 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 42.9 bits (101), Expect = 1e-05
Identities = 17/95 (17%), Positives = 45/95 (47%)
Query: 44 SSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEKERKESKPKESSSEK 103
++S ++D ++ ++K + +E+ K + K + E+E + +E+++
Sbjct: 32 FNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIEENNNFI 91
Query: 104 EKKKEKKDKKEKSHKHKDKDRERDKDEKKEQKESK 138
+ KEK +K +S+K + E+ ++K+
Sbjct: 92 KMAKEKLAQKMESNKENREAHLAAMLERLQEKDKH 126
|
| >d1sa0e_ a.137.10.1 (E:) Stathmin 4 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 138 | Back information, alignment and structure |
|---|
class: All alpha proteins fold: Non-globular all-alpha subunits of globular proteins superfamily: Stathmin family: Stathmin domain: Stathmin 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Score = 36.4 bits (84), Expect = 0.003
Identities = 18/105 (17%), Positives = 43/105 (40%), Gaps = 1/105 (0%)
Query: 30 PSTSTSSSTSNPTNSSSSKKDKKDKDRDKEKEKEKKDKEKDKSAVSSKEKEKDKVSSKEK 89
+ S P S ++ + K E+ ++ ++ E K +E E++ + +
Sbjct: 26 FDGVPEFNASLPRRRDPSLEEIQKKLEAAEERRKYQEAELLKHLAEKREHEREVIQKAIE 85
Query: 90 ERKESKPKESSSEKEKKKEKKDKKEKSHKHKDKDRERDKDEKKEQ 134
E K + + +K E + ++H +R ++KD+ E+
Sbjct: 86 ENNNFI-KMAKEKLAQKMESNKENREAHLAAMLERLQEKDKHAEE 129
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} Length = 357 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Score = 38.2 bits (88), Expect = 0.002
Identities = 45/359 (12%), Positives = 87/359 (24%), Gaps = 73/359 (20%)
Query: 242 LLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFI 301
LL +R A F E D + + K H+ GD+S S + +
Sbjct: 21 LLEKGYEVHGIKRRASSFNTERVDHIYQD-PHTCNPKFHLHYGDLSDTS----NLTRILR 75
Query: 302 QHHIHVIIHAAASLRFDELIQD---AFTLNIQATRELLDLATR--CSQLKAILHVSTLYT 356
+ + + A + ++ T LL+ + ST
Sbjct: 76 EVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFYQAST--- 132
Query: 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVV 416
E Y +E+ + F + Y+ K +
Sbjct: 133 --------SELYG---------------LVQEIPQKETTPFYPR--SPYAVAKLYAYWIT 167
Query: 417 EKY--LYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKC 474
Y Y + N P +
Sbjct: 168 VNYRESYGMYACNGILF---------------NHESPRRGETFVTRKITRAIANIAQGLE 212
Query: 475 DLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYM 534
+ + NM W A D+ + + + P + ++ Y + M
Sbjct: 213 SCLYLG---NMDSLRDWGHAKDYVKMQWMM-----LQQEQPEDFVIATGVQYSVRQFVEM 264
Query: 535 NSVQAAGKCDEQYIASVLAIWTYTFCMEQNQFMYLLRVWFLHMIPGMIMDTVLRCLNKP 593
+ Q K + T E+ + + + PG ++ V +P
Sbjct: 265 AAAQLGIKL----------RFEGTGVEEKGIVVSVTGHDAPGVKPGDVIIAVDPRYFRP 313
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 596 | |||
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 99.94 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 99.93 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 99.93 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 99.92 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.92 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.92 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 99.91 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 99.91 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 99.91 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 99.89 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.88 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 99.88 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.88 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 99.87 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 99.87 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 99.87 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 99.84 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 99.84 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 99.84 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 99.74 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 99.73 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 99.73 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 99.64 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 99.61 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 99.57 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 99.57 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 99.54 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 99.49 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 99.49 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 99.22 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.77 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 98.73 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 98.73 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.7 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 98.67 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 98.66 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.65 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 98.65 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.65 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 98.64 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.64 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 98.64 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 98.64 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 98.62 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.61 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 98.58 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.58 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.57 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.57 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.57 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 98.56 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.56 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.56 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.54 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.53 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.52 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.52 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 98.49 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 98.49 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.49 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 98.44 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.43 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.42 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 98.42 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 98.41 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 98.4 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 98.4 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.4 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 98.39 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 98.29 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 98.27 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 98.25 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 98.24 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.22 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 98.19 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 98.16 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.15 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 98.13 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.13 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 98.06 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 98.01 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 98.0 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.93 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 97.91 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 97.83 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 97.8 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 97.78 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 97.71 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 97.7 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 97.64 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.54 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 97.48 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 97.47 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.38 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 97.22 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 95.85 |
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=99.94 E-value=2.8e-26 Score=239.03 Aligned_cols=204 Identities=15% Similarity=0.049 Sum_probs=155.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccc--cEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhc--CCCceEE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHI--HVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRC--SQLKAIL 349 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~v--d~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~--~~vkrfV 349 (596)
.+++++.|||++.. .+..++.++ |+||||||..+.. .+...++++|+.||.+||++|+.. .++.+||
T Consensus 55 ~~~~~~~~Dl~d~~------~~~~~~~~~~~d~v~h~aa~~~~~~~~~~~~~~~~~Nv~gt~nllea~~~~~~~~~~r~i 128 (357)
T d1db3a_ 55 PKFHLHYGDLSDTS------NLTRILREVQPDEVYNLGAMSHVAVSFESPEYTADVDAMGTLRLLEAIRFLGLEKKTRFY 128 (357)
T ss_dssp CCEEECCCCSSCHH------HHHHHHHHHCCSEEEECCCCCTTTTTTSCHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEE
T ss_pred CCeEEEEeecCCHH------HHHHHHhccCCCEEEEeecccccchhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCCcEEE
Confidence 68999999999654 588888866 9999999986543 345668899999999999999873 2445799
Q ss_pred EecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCE
Q psy5825 350 HVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPL 425 (596)
Q Consensus 350 ~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~ 425 (596)
|+||++|||... .++|+... . ..+.|+.||++||.+++.++ .++++
T Consensus 129 ~~SS~~vYG~~~~~~~~E~~~~-----------------------------~-P~~~Y~~sK~~~E~~~~~~~~~~~l~~ 178 (357)
T d1db3a_ 129 QASTSELYGLVQEIPQKETTPF-----------------------------Y-PRSPYAVAKLYAYWITVNYRESYGMYA 178 (357)
T ss_dssp EEEEGGGGTTCCSSSBCTTSCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCCE
T ss_pred EEEchhhhCCCCCCCcCCCCCC-----------------------------C-CCChHHHHHHHHHHHHHHHHHHhCCCE
Confidence 999999998643 34443211 0 23679999999999999988 79999
Q ss_pred EEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccc-eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCC
Q psy5825 426 AMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLI-HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPA 504 (596)
Q Consensus 426 ~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~-~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~ 504 (596)
+|+||++|||+...+. ........++..+..|.. ..++|++...+||+||+|+|++++.++..
T Consensus 179 ~ilR~~~vyGp~~~~~----~~~~~i~~~~~~~~~~~~~~~~~g~~~~~r~~~~v~D~~~a~~~~~~~------------ 242 (357)
T d1db3a_ 179 CNGILFNHESPRRGET----FVTRKITRAIANIAQGLESCLYLGNMDSLRDWGHAKDYVKMQWMMLQQ------------ 242 (357)
T ss_dssp EEEEECCEECTTSCTT----SHHHHHHHHHHHHHTTSCCCEEESCTTCEECCEEHHHHHHHHHHTTSS------------
T ss_pred EEEEeccccCCCCCcC----CCchHHHHHHHHHHhCCCceEEECCCCeeecceeechHHHHHHHHHhC------------
Confidence 9999999999854211 000111233344444433 34568889999999999999999988753
Q ss_pred CcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 505 SLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 505 ~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||+++ ..+|+.++++.+...++
T Consensus 243 --------~~~~~yni~sg--~~~s~~~~~~~~~~~~g 270 (357)
T d1db3a_ 243 --------EQPEDFVIATG--VQYSVRQFVEMAAAQLG 270 (357)
T ss_dssp --------SSCCCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred --------CCCCeEEECCC--CceehHHHHHHHHHHhC
Confidence 24679999999 89999999999999876
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.93 E-value=7.1e-26 Score=231.50 Aligned_cols=201 Identities=17% Similarity=0.127 Sum_probs=153.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.+|+.+.. +.++|+||||||.+... .+...++.+||.||.+||++|+.. ++ +|||+||
T Consensus 49 ~~~d~~~~~~~~~~-----------~~~~d~VihlAa~~~~~~~~~~~~~~~~~Nv~g~~~ll~~~~~~-~~-k~I~~SS 115 (312)
T d2b69a1 49 ENFELINHDVVEPL-----------YIEVDQIYHLASPASPPNYMYNPIKTLKTNTIGTLNMLGLAKRV-GA-RLLLAST 115 (312)
T ss_dssp TTEEEEECCTTSCC-----------CCCCSEEEECCSCCSHHHHTTCHHHHHHHHHHHHHHHHHHHHHH-TC-EEEEEEE
T ss_pred CceEEEehHHHHHH-----------HcCCCEEEECcccCCchhHHhCHHHHHHHHHHHHHHHHHHHHHc-CC-cEEEEEC
Confidence 35667777765443 35799999999987643 345568899999999999999984 44 8999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
.+|||... .+.|+.+.. .+|. . ..+.|+.||.++|.++..++ .|++++++|
T Consensus 116 ~~vy~~~~~~~~~e~~~~~---------------------~~~~---~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR 170 (312)
T d2b69a1 116 SEVYGDPEVHPQSEDYWGH---------------------VNPI---G-PRACYDEGKRVAETMCYAYMKQEGVEVRVAR 170 (312)
T ss_dssp GGGGBSCSSSSBCTTCCCB---------------------CCSS---S-TTHHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred hheecCCCCCCCCccccCC---------------------CCCC---C-CccHHHHHHHHHHHHHHHHHHHhCCcEEEEE
Confidence 99999643 333332110 0010 0 23679999999999999987 899999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
|++|||++..+. ....+..++..+..|....+++++...+|||||+|+|++++.++...
T Consensus 171 ~~~vyGp~~~~~-----~~~~i~~~i~~~~~g~~i~i~~~g~~~r~~i~v~D~~~~~~~~~~~~---------------- 229 (312)
T d2b69a1 171 IFNTFGPRMHMN-----DGRVVSNFILQALQGEPLTVYGSGSQTRAFQYVSDLVNGLVALMNSN---------------- 229 (312)
T ss_dssp ECCEECTTCCTT-----CCCHHHHHHHHHHHTCCEEEESSSCCEEECEEHHHHHHHHHHHHTSS----------------
T ss_pred eeeEECCCCCCC-----CccHHHHHHHHHHcCCCeEEeCCCCeeEccEEHHHHHHHHHHHHhhc----------------
Confidence 999999865321 11223456667777776677899999999999999999998887432
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+.+||++++ ..+++.+++..+...++
T Consensus 230 ----~~~~~n~~~~--~~~~~~~~~~~i~~~~~ 256 (312)
T d2b69a1 230 ----VSSPVNLGNP--EEHTILEFAQLIKNLVG 256 (312)
T ss_dssp ----CCSCEEESCC--CEEEHHHHHHHHHHHHT
T ss_pred ----cCCceEecCC--cccchhhHHHHHHHHhC
Confidence 3568999999 99999999999999887
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=99.93 E-value=6.9e-25 Score=224.83 Aligned_cols=201 Identities=18% Similarity=0.133 Sum_probs=162.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.++.++.+|+.+.. .+..+...+|+|||+|+...... .+...+.+|+.||.+||++|.. .++++|||+||
T Consensus 55 ~~~~~~~~d~~~~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~-~~~~~~I~~Ss 127 (322)
T d1r6da_ 55 PRLRFVHGDIRDAG------LLARELRGVDAIVHFAAESHVDRSIAGASVFTETNVQGTQTLLQCAVD-AGVGRVVHVST 127 (322)
T ss_dssp TTEEEEECCTTCHH------HHHHHTTTCCEEEECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHH-TTCCEEEEEEE
T ss_pred CCeEEEEeccccch------hhhccccccceEEeecccccccccccchHHHhhhhHHHHHHHHHHHHH-cCCceEEEeec
Confidence 68999999998654 36777889999999998876443 3345789999999999999998 57899999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
.+|||... .+.|+... . ..+.|+.||.++|.++..++ .+++++++|
T Consensus 128 ~~~yg~~~~~~~~E~~~~-----------------------------~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR 177 (322)
T d1r6da_ 128 NQVYGSIDSGSWTESSPL-----------------------------E-PNSPYAASKAGSDLVARAYHRTYGLDVRITR 177 (322)
T ss_dssp GGGGCCCSSSCBCTTSCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred ceeecCCCCCCCCCCCCC-----------------------------C-CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEE
Confidence 99999754 23332110 0 23679999999999999988 799999999
Q ss_pred CCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAP 509 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~ 509 (596)
|++|||+...+ + ..+..++..+..|....+++++.+.+|||||+|||++++.++....
T Consensus 178 ~~~vyGp~~~~-----~--~~i~~~i~~~~~~~~i~v~~~g~~~r~~i~v~D~a~ai~~~~~~~~--------------- 235 (322)
T d1r6da_ 178 CCNNYGPYQHP-----E--KLIPLFVTNLLDGGTLPLYGDGANVREWVHTDDHCRGIALVLAGGR--------------- 235 (322)
T ss_dssp ECEEECTTCCT-----T--SHHHHHHHHHHTTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC---------------
T ss_pred eeeEECcCCCc-----C--cHHHHHHHHHHcCCCcEEecCCCeEEccEEHHHHHHHHHHHHhCCC---------------
Confidence 99999985432 1 1234566666777655677899999999999999999999997642
Q ss_pred CCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 510 IPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 510 ~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++||++++ .++++.++++.+.+.++
T Consensus 236 ----~~~~~ni~~~--~~~s~~e~~~~i~~~~~ 262 (322)
T d1r6da_ 236 ----AGEIYHIGGG--LELTNRELTGILLDSLG 262 (322)
T ss_dssp ----TTCEEEECCC--CEEEHHHHHHHHHHHHT
T ss_pred ----CCCeeEEeec--ccchhHHHHHHHHHHhC
Confidence 4789999999 99999999999999887
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=2.3e-24 Score=222.37 Aligned_cols=219 Identities=14% Similarity=0.084 Sum_probs=161.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhh---HHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDEL---IQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~---~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
.+++++.|||++... .+..+..++|+||||||.+..... ...++.+|+.||.+||++|.. .+ .+++|+||
T Consensus 45 ~~~~~i~~Di~~~~~-----~~~~~~~~~d~Vih~a~~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~-~~-~~~~~~ss 117 (342)
T d2blla1 45 PHFHFVEGDISIHSE-----WIEYHVKKCDVVLPLVAIATPIEYTRNPLRVFELDFEENLRIIRYCVK-YR-KRIIFPST 117 (342)
T ss_dssp TTEEEEECCTTTCSH-----HHHHHHHHCSEEEECBCCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHH-TT-CEEEEECC
T ss_pred CCeEEEECccCChHH-----HHHHHHhCCCccccccccccccccccCCcccccccccccccccccccc-cc-cccccccc
Confidence 689999999986542 244467789999999998775443 345789999999999999998 33 57789999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
+.+|+... ...|.....+.+ + ... +.+.|+.||.++|+++..++ .|++++|+|
T Consensus 118 ~~~~~~~~~~~~~~~~~~~~~~--------------------~--~~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~i~r 174 (342)
T d2blla1 118 SEVYGMCSDKYFDEDHSNLIVG--------------------P--VNK-PRWIYSVSKQLLDRVIWAYGEKEGLQFTLFR 174 (342)
T ss_dssp GGGGBTCCCSSBCTTTCCCBCC--------------------C--TTC-GGGHHHHHHHHHHHHHHHHHHHHCCCEEEEE
T ss_pred cccccccccccccccccccccc--------------------c--cCC-CcchhhhcccchhhhhhhhhcccCceeEEee
Confidence 99998654 122111000000 0 011 23679999999999999988 799999999
Q ss_pred CCccccCCCCCccccCCCCC-CcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLY-GPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~-~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
|+.+||+...+..|...... ....++..+..|....+++++...++|+||+|+|++++.++......
T Consensus 175 ~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~g~~~r~~i~v~D~~~a~~~~~~~~~~~------------ 242 (342)
T d2blla1 175 PFNWMGPRLDNLNAARIGSSRAITQLILNLVEGSPIKLIDGGKQKRCFTDIRDGIEALYRIIENAGNR------------ 242 (342)
T ss_dssp ECSEECSSCCCTTCSBSCBCHHHHHHHHHHHHTCCEEEGGGSCCEEECEEHHHHHHHHHHHHHCGGGT------------
T ss_pred ccccccccccccccccccccccchHHHHHHHhCCCccccCCCCeeeeecccccccceeeeehhhcccc------------
Confidence 99999987654332221111 12345566677776777899999999999999999999999865431
Q ss_pred CCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 509 PIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++. ..+|+.+|++.|.+.++
T Consensus 243 ----~~g~~~Nig~~~-~~~t~~~l~~~i~~~~~ 271 (342)
T d2blla1 243 ----CDGEIINIGNPE-NEASIEELGEMLLASFE 271 (342)
T ss_dssp ----TTTEEEEECCTT-SEEEHHHHHHHHHHHHH
T ss_pred ----CCCeEEEEeccc-chhHHHHHHHHHHHHhC
Confidence 257899998761 45899999999999877
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.92 E-value=1.1e-24 Score=227.25 Aligned_cols=248 Identities=18% Similarity=0.107 Sum_probs=175.1
Q ss_pred EEeCCCCcccHHHHHHHHhhhhh-----HHHhh-----hhhhh-hhcCcEEEEEeccCCCCCCCCHHHHHHHhcc--ccE
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDEL-----FDRLK-----NEQAD-ILQRKVHIISGDISQPSLGISSHDQQFIQHH--IHV 307 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~~-----~~~l~-----~~~~~-~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ 307 (596)
+||.+.+|.-+..-+..++..+. ++.+. ..... ....+++++.|||+++. .+..++.. +|+
T Consensus 3 ILItG~tGfIGs~l~~~L~~~g~~vv~~~d~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~------~l~~~~~~~~~d~ 76 (361)
T d1kewa_ 3 ILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLSDISESNRYNFEHADICDSA------EITRIFEQYQPDA 76 (361)
T ss_dssp EEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGTTTTTCTTEEEEECCTTCHH------HHHHHHHHHCCSE
T ss_pred EEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCccccHHHHHhhhhcCCcEEEEccCCCHH------HHHHHHHhCCCCE
Confidence 47777777766665555554311 11000 00000 11258999999999764 37777664 799
Q ss_pred EEEcCccCChhhh---HHHHHHHHHHHHHHHHHHHHhcC--------CCceEEEecCcccccCCcc--ccccccCCCCCh
Q psy5825 308 IIHAAASLRFDEL---IQDAFTLNIQATRELLDLATRCS--------QLKAILHVSTLYTHSYRED--IQEEFYPPLFSY 374 (596)
Q Consensus 308 ViH~AA~v~~~~~---~~~~~~~NV~GT~~LL~~a~~~~--------~vkrfV~vSS~~v~g~~~~--i~E~~~~~~~~~ 374 (596)
||||||..+.... ...++++|+.||.+|+++|..+. ++.+|||+||.+|||.... ..|.....+...
T Consensus 77 VihlAa~~~~~~~~~~p~~~~~~N~~gt~nl~~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~~~~~~~ 156 (361)
T d1kewa_ 77 VMHLAAESHVDRSITGPAAFIETNIVGTYALLEVARKYWSALGEDKKNNFRFHHISTDEVYGDLPHPDEVENSVTLPLFT 156 (361)
T ss_dssp EEECCSCCCHHHHHHCTHHHHHHHTHHHHHHHHHHHHHHHTSCHHHHHHCEEEEEEEGGGGCCCCCGGGSCTTSCCCCBC
T ss_pred EEECccccchhhHHhCHHHHHHHHHHHHHHHHHHHHHhhhhhhhcccCceEEEEeccceeeCCCccCCccccccCCCCcc
Confidence 9999998764432 34588999999999999998731 3459999999999997541 112111111100
Q ss_pred HHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcH
Q psy5825 375 EDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPG 452 (596)
Q Consensus 375 ~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~ 452 (596)
..++ .. +.+.||.||+++|.++..++ .+++++++||++|||+... .+ ..+.
T Consensus 157 ----------------e~~~---~~-p~s~Yg~sK~~~E~~~~~~~~~~~i~~~~lR~~~vyGp~~~-----~~--~~i~ 209 (361)
T d1kewa_ 157 ----------------ETTA---YA-PSSPYSASKASSDHLVRAWRRTYGLPTIVTNCSNNYGPYHF-----PE--KLIP 209 (361)
T ss_dssp ----------------TTSC---CC-CCSHHHHHHHHHHHHHHHHHHHHCCCEEEEEECEEESTTCC-----TT--SHHH
T ss_pred ----------------cCCC---CC-CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEecCceECcCCC-----cC--cHHH
Confidence 0000 01 34779999999999999988 8999999999999997532 11 1234
Q ss_pred HHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHH
Q psy5825 453 GAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLE 532 (596)
Q Consensus 453 ~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~e 532 (596)
.++..+..|....++|++.+.+||+||+|+|++++.++.... .+++|||+++ +++++.+
T Consensus 210 ~~i~~~~~g~~~~v~g~g~~~r~~i~v~D~a~ai~~~~~~~~-------------------~~~~~Ni~s~--~~~s~~~ 268 (361)
T d1kewa_ 210 LVILNALEGKPLPIYGKGDQIRDWLYVEDHARALHMVVTEGK-------------------AGETYNIGGH--NEKKNLD 268 (361)
T ss_dssp HHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHHCC-------------------TTCEEEECCC--CEEEHHH
T ss_pred HHHHHHHcCCCcEEeCCCCeEEeCEEHHHHHHHHHHHHhcCC-------------------CCCeEEECCC--CCcchHH
Confidence 566667777766678999999999999999999999987642 4679999999 8999999
Q ss_pred HHHHHHHHcc
Q psy5825 533 YMNSVQAAGK 542 (596)
Q Consensus 533 l~~~l~~~~~ 542 (596)
++..+...++
T Consensus 269 ~~~~i~~~~~ 278 (361)
T d1kewa_ 269 VVFTICDLLD 278 (361)
T ss_dssp HHHHHHHHHH
T ss_pred HHhHhhhhcc
Confidence 9999988665
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=4.3e-24 Score=220.41 Aligned_cols=212 Identities=18% Similarity=0.156 Sum_probs=156.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.|||++.. .+..+++ ++|+||||||...... ....++.+||.||.+||++|+. .++++|||+
T Consensus 50 ~~~~~~~~Dl~d~~------~l~~~~~~~~~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nlL~~~~~-~~v~~~i~~ 122 (338)
T d1udca_ 50 KHPTFVEGDIRNEA------LMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRA-ANVKNFIFS 122 (338)
T ss_dssp SCCEEEECCTTCHH------HHHHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEE
T ss_pred CCCEEEEeecCCHH------HHHHHHhccCCCEEEECCCccchhhHHhCHHHHHHhHHHHHHHHHHHHHH-hCCCEEEec
Confidence 68999999999654 4778777 6899999999876443 3456899999999999999998 479999999
Q ss_pred cCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---cCCCEE
Q psy5825 352 STLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---YKLPLA 426 (596)
Q Consensus 352 SS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---~gl~~~ 426 (596)
||.+||+... ...|.. +. .. ..+.|+.+|+++|.++..+. .+++++
T Consensus 123 Ss~~vy~~~~~~~~~e~~--------------------------~~--~~-p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~ 173 (338)
T d1udca_ 123 SSATVYGDQPKIPYVESF--------------------------PT--GT-PQSPYGKSKLMVEQILTDLQKAQPDWSIA 173 (338)
T ss_dssp EEGGGGCSCCSSSBCTTS--------------------------CC--CC-CSSHHHHHHHHHHHHHHHHHHHSTTCEEE
T ss_pred CcceEEcccccccccccc--------------------------cc--CC-CcchHHHHHhhhhHHHHHHHhhccCCeEE
Confidence 9999998643 111110 00 01 34679999999999998765 689999
Q ss_pred EecCCccccCCCCCccccCCC--CCCcHHHHHHHHhcc--ceEeec------CCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNN--LYGPGGAAAGAALGL--IHTFYA------KHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~--~~~~~~l~~~~~~g~--~~~~~~------~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
|+||++|||+...+..|.... ......++...+.+. ...+.| ++...+||+||+|+|.++..++......
T Consensus 174 ilR~~~v~G~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~rd~i~v~D~~~~~~~~~~~~~~~ 253 (338)
T d1udca_ 174 LLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANK 253 (338)
T ss_dssp EEEECEEECCCTTSSSCCCCCSSCCSHHHHHHHHHTTSSSCEEEECSCSSSTTSSCEECEEEHHHHHHHHHHHHHHHTTC
T ss_pred EEeeccEEeccCCCCCCCCccccHHHHHHHHHHHHhcCCCCEEEeCCCcccCCCCceeeEEEEeehhhhccccccccccc
Confidence 999999999876544332111 111223333333322 223333 3677899999999999988887654331
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||++++ .++++.++++.|.+.++
T Consensus 254 ----------------~~~~i~Ni~~~--~~~si~e~~~~i~~~~g 281 (338)
T d1udca_ 254 ----------------PGVHIYNLGAG--VGNSVLDVVNAFSKACG 281 (338)
T ss_dssp ----------------CEEEEEEESCS--SCEEHHHHHHHHHHHHT
T ss_pred ----------------cCcceeeecCC--CCCcHHHHHHHHHHHHC
Confidence 24679999998 89999999999999887
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.91 E-value=8.7e-24 Score=218.19 Aligned_cols=206 Identities=14% Similarity=0.068 Sum_probs=163.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVST 353 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS 353 (596)
..+.++.||+.+.. .+.......++|||+||..... .+....+.+|+.||.+|+++|.. .++++|||+||
T Consensus 70 ~~~~~~~~d~~d~~------~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~-~~~~~~i~~SS 142 (341)
T d1sb8a_ 70 SNFKFIQGDIRNLD------DCNNACAGVDYVLHQAALGSVPRSINDPITSNATNIDGFLNMLIAARD-AKVQSFTYAAS 142 (341)
T ss_dssp TTEEEEECCTTSHH------HHHHHHTTCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHH-TTCSEEEEEEE
T ss_pred CCeeEEeecccccc------ccccccccccccccccccccccccccCccchhheeehhHHHHHHHHHh-cCCceEEEccc
Confidence 67999999998654 3777788899999999987643 33455889999999999999999 57899999999
Q ss_pred cccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEec
Q psy5825 354 LYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVR 429 (596)
Q Consensus 354 ~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlR 429 (596)
++|||... .++|+... . +.+.|+.||+++|+++..+. .+++++|+|
T Consensus 143 ~~vyg~~~~~~~~E~~~~-----------------------------~-p~~~Y~~sK~~~E~~~~~~~~~~~i~~~ilR 192 (341)
T d1sb8a_ 143 SSTYGDHPGLPKVEDTIG-----------------------------K-PLSPYAVTKYVNELYADVFSRCYGFSTIGLR 192 (341)
T ss_dssp GGGGTTCCCSSBCTTCCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCCCEEEE
T ss_pred ceeeCCCCCCCccCCCCC-----------------------------C-CCCcchHHHHHHHHHHHHHHHHhCCCeEEEE
Confidence 99999644 34443211 1 33679999999999999888 899999999
Q ss_pred CCccccCCCCCccccCCCCCCc-HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCC
Q psy5825 430 PSIVVSTWKEPIVGWSNNLYGP-GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVA 508 (596)
Q Consensus 430 p~~V~G~~~~p~~G~~~~~~~~-~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~ 508 (596)
|++|||+...+... +... ..++..+..|....+.+++.+.++|+||+|+|.|++.++.....
T Consensus 193 ~~~v~G~~~~~~~~----~~~~i~~~~~~~~~g~~i~~~g~g~~~r~~i~v~D~~~a~~~~~~~~~~------------- 255 (341)
T d1sb8a_ 193 YFNVFGRRQDPNGA----YAAVIPKWTSSMIQGDDVYINGDGETSRDFCYIENTVQANLLAATAGLD------------- 255 (341)
T ss_dssp ECCEECTTCCCCST----TCCHHHHHHHHHHHTCCCEEESSSCCEECCEEHHHHHHHHHHHHTCCGG-------------
T ss_pred eceeeccCcCCCCc----hhhhHHHHHHHHHcCCceEEcCCCCEEEEEEEEeccchhhhhhhhcccc-------------
Confidence 99999987654211 1222 23445566676566778899999999999999999988865433
Q ss_pred CCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 509 PIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 509 ~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+.+||++++ ..+|+.+++..|.+.++
T Consensus 256 ----~~~~~~~~~~~--~~~si~~i~~~i~~~~~ 283 (341)
T d1sb8a_ 256 ----ARNQVYNIAVG--GRTSLNQLFFALRDGLA 283 (341)
T ss_dssp ----GCSEEEEESCS--CCEEHHHHHHHHHHHHH
T ss_pred ----ccceeeeeccc--ccchHHHHHHHHHHHhc
Confidence 24779999998 89999999999998776
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.91 E-value=6.1e-24 Score=221.13 Aligned_cols=248 Identities=9% Similarity=0.006 Sum_probs=174.0
Q ss_pred EEEEeCCCCcccHHHHHHHHhhhh--h--HHHhhhhh-hhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCc
Q psy5825 239 IYILLRSKKNKTVQERLAEQFKDE--L--FDRLKNEQ-ADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAA 313 (596)
Q Consensus 239 V~~LvR~~~~~~~~~Rl~~~~~~~--~--~~~l~~~~-~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA 313 (596)
.=+||.+.+|.-+..-+..++..+ + +++.+... .... ..+.+..+|+.+. ..+..+++++|+|||+|+
T Consensus 16 MKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~~~-~~~~~~~~D~~~~------~~~~~~~~~~d~Vih~a~ 88 (363)
T d2c5aa1 16 LKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTEDM-FCDEFHLVDLRVM------ENCLKVTEGVDHVFNLAA 88 (363)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGGG-TCSEEEECCTTSH------HHHHHHHTTCSEEEECCC
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhhhc-ccCcEEEeechhH------HHHHHHhhcCCeEeeccc
Confidence 336888888888887777776532 1 11111110 1122 4567888888754 347778889999999998
Q ss_pred cCCh----hhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChH
Q psy5825 314 SLRF----DELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQE 387 (596)
Q Consensus 314 ~v~~----~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~ 387 (596)
...+ .......+.+|+.||.+||++|.. .++++|||+||+++||... ...+....
T Consensus 89 ~~~~~~~~~~~~~~~~~~n~~gt~~ll~~~~~-~~vk~~i~~SS~~~~~~~~~~~~~~~~~~------------------ 149 (363)
T d2c5aa1 89 DMGGMGFIQSNHSVIMYNNTMISFNMIEAARI-NGIKRFFYASSACIYPEFKQLETTNVSLK------------------ 149 (363)
T ss_dssp CCCCHHHHTTCHHHHHHHHHHHHHHHHHHHHH-TTCSEEEEEEEGGGSCGGGSSSSSSCEEC------------------
T ss_pred ccccccccccccccccccccchhhHHHHhHHh-hCccccccccccccccccccccccccccc------------------
Confidence 7664 334556889999999999999999 6899999999999998643 11111100
Q ss_pred HHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHH-HHHHhccce
Q psy5825 388 ELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAA-AGAALGLIH 464 (596)
Q Consensus 388 ~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~-~~~~~g~~~ 464 (596)
.....| .. +.+.|+.||+++|++++.+. .|++++|+||++|||+.......+ ......++ .....+...
T Consensus 150 -~~e~~~---~~-p~~~Yg~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyG~~~~~~~~~---~~~~~~~~~~~~~~~~~~ 221 (363)
T d2c5aa1 150 -ESDAWP---AE-PQDAFGLEKLATEELCKHYNKDFGIECRIGRFHNIYGPFGTWKGGR---EKAPAAFCRKAQTSTDRF 221 (363)
T ss_dssp -GGGGSS---BC-CSSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEECTTSCCSSSC---CCHHHHHHHHHHHCSSCE
T ss_pred -cccCCc---CC-CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEeeeEeccCCcccccc---cccccccccccccccccc
Confidence 000001 11 34689999999999999888 799999999999999865432111 01111111 112222334
Q ss_pred EeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 465 TFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 465 ~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..++++.+.+|||||+|+|.+++.++.. ..+++|||+++ ..+++.+|++.+..+.+
T Consensus 222 ~~~g~g~~~rd~i~v~D~~~~~~~~~~~--------------------~~~~~~ni~~~--~~~s~~~l~~~i~~~~g 277 (363)
T d2c5aa1 222 EMWGDGLQTRSFTFIDECVEGVLRLTKS--------------------DFREPVNIGSD--EMVSMNEMAEMVLSFEE 277 (363)
T ss_dssp EEESCSCCEECCEEHHHHHHHHHHHHHS--------------------SCCSCEEECCC--CCEEHHHHHHHHHHTTT
T ss_pred cccCCCCeEEEEeehhHHHHHHHHHHhC--------------------CCCCeEEEecC--CcccHHHHHHHHHHHhC
Confidence 5668889999999999999999988753 24679999999 99999999999999887
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=99.91 E-value=8.3e-24 Score=218.86 Aligned_cols=250 Identities=16% Similarity=0.116 Sum_probs=177.1
Q ss_pred EEeCCCCcccHHHHHHHHhhhh----hH--HHh-----hhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEE
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDE----LF--DRL-----KNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVII 309 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~----~~--~~l-----~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~Vi 309 (596)
+||.|.+|.-+..-+..++..+ ++ |.+ ..........++.++.|||++.. .+..++..++.||
T Consensus 5 ILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d~~~~~~~~~~~~~~~~~~i~~~~~Di~d~~------~~~~~~~~~~~v~ 78 (346)
T d1oc2a_ 5 IIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLEAILGDRVELVVGDIADAE------LVDKLAAKADAIV 78 (346)
T ss_dssp EEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTGGGCSSSEEEEECCTTCHH------HHHHHHTTCSEEE
T ss_pred EEEeCCCcHHHHHHHHHHHHCCCCeEEEEEeCCCccccHHHHHHhhcCCeEEEEccCCCHH------HHHHHHhhhhhhh
Confidence 5777888877777667666532 11 000 00001223368999999998654 4888999999999
Q ss_pred EcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCCh
Q psy5825 310 HAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQ 386 (596)
Q Consensus 310 H~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e 386 (596)
|+|+...... +...++.+|+.||.+||++|... + .++||+||.+|||.... .+........+.
T Consensus 79 ~~a~~~~~~~~~~~~~~~~~~N~~g~~nll~~~~~~-~-~k~i~~ss~~vyg~~~~-~~~~~~~~~~~~----------- 144 (346)
T d1oc2a_ 79 HYAAESHNDNSLNDPSPFIHTNFIGTYTLLEAARKY-D-IRFHHVSTDEVYGDLPL-REDLPGHGEGPG----------- 144 (346)
T ss_dssp ECCSCCCHHHHHHCCHHHHHHHTHHHHHHHHHHHHH-T-CEEEEEEEGGGGCCBCC-GGGSTTTTCSTT-----------
T ss_pred hhhhcccccchhhCcccceeeehHhHHhhhhhhccc-c-ccccccccceEecccCc-cccccccccCcc-----------
Confidence 9999876543 23458899999999999999984 3 68999999999986431 111100000000
Q ss_pred HHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccce
Q psy5825 387 EELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIH 464 (596)
Q Consensus 387 ~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~ 464 (596)
.......+ .. ..+.|+.||+++|.+++.++ .+++++|+||++|||+..... .....++.....|...
T Consensus 145 ~~~~e~~~---~~-p~s~Y~~sK~~~E~~~~~~~~~~~i~~~ilR~~~vyGp~~~~~-------~~~~~~i~~~~~~~~~ 213 (346)
T d1oc2a_ 145 EKFTAETN---YN-PSSPYSSTKAASDLIVKAWVRSFGVKATISNCSNNYGPYQHIE-------KFIPRQITNILAGIKP 213 (346)
T ss_dssp SSBCTTSC---CC-CCSHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCEESTTCCTT-------SHHHHHHHHHHHTCCC
T ss_pred cccccCCC---CC-CCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeecceeCCCCCcc-------chhHHHHHHHHcCCce
Confidence 00000000 01 34789999999999999988 799999999999999754211 1223445555566666
Q ss_pred EeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 465 TFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 465 ~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+++++...++||||+|+|++++.++... ..+.+||++++ ..+++.++++.+.+.++
T Consensus 214 ~i~~~g~~~r~~i~v~D~a~a~~~~~~~~-------------------~~~~~~~~~~~--~~~~~~~~~~~i~~~~~ 270 (346)
T d1oc2a_ 214 KLYGEGKNVRDWIHTNDHSTGVWAILTKG-------------------RMGETYLIGAD--GEKNNKEVLELILEKMG 270 (346)
T ss_dssp EEETTSCCEEECEEHHHHHHHHHHHHHHC-------------------CTTCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred eEeCCCCccccccchhhHHHHHHHHHhhc-------------------ccCcccccccc--ccccchHHHHHHHHHhC
Confidence 77899999999999999999999887654 24779999999 89999999999999887
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=99.89 E-value=1.8e-22 Score=208.43 Aligned_cols=220 Identities=13% Similarity=0.070 Sum_probs=155.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
....++.|||.+... +..++.++|+|||+|+.+.+..+...++.+||.||.+||++|.+..++++|||+||+++
T Consensus 62 ~~~~~~~~Dl~~~~~------~~~~~~~~~~v~~~a~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~~~v~~~i~~SS~~~ 135 (342)
T d1y1pa1 62 RFETAVVEDMLKQGA------YDEVIKGAAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTVS 135 (342)
T ss_dssp TEEEEECSCTTSTTT------TTTTTTTCSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGGG
T ss_pred cccEEEeccccchhh------hhhhcccchhhhhhcccccccccccccccchhhhHHHHHHhhhccccccccccccccee
Confidence 345678899998765 77788999999999999998888888999999999999999998668999999999876
Q ss_pred ccCCc------cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----cCCCEE
Q psy5825 357 HSYRE------DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----YKLPLA 426 (596)
Q Consensus 357 ~g~~~------~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----~gl~~~ 426 (596)
++... .++|+.+ +...+.... .+.+ ....+..++|+.||+++|++++.++ .++.++
T Consensus 136 ~~~~~~~~~~~~~~e~~~----~~~~~~~~~-~~~e---------~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~ 201 (342)
T d1y1pa1 136 ALIPKPNVEGIYLDEKSW----NLESIDKAK-TLPE---------SDPQKSLWVYAASKTEAELAAWKFMDENKPHFTLN 201 (342)
T ss_dssp TCCCCTTCCCCEECTTCC----CHHHHHHHH-HSCT---------TSTTHHHHHHHHHHHHHHHHHHHHHHHHCCSSEEE
T ss_pred eccCCCCCCCcccccccc----ccccccccc-cccc---------cCCCCCcCcccchhHhHHHHHHHhhhhcccccccc
Confidence 54322 1122111 111111000 0000 0000023579999999999999886 457889
Q ss_pred EecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q psy5825 427 MVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASL 506 (596)
Q Consensus 427 IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~ 506 (596)
++||++|||+...|.. .......++..+..|..... ..+....+||||+|+|.+++.++....
T Consensus 202 ~i~p~~v~Gp~~~~~~----~~~~~~~~~~~l~~g~~~~~-~~~~~~~~~v~v~Dva~~~i~~l~~~~------------ 264 (342)
T d1y1pa1 202 AVLPNYTIGTIFDPET----QSGSTSGWMMSLFNGEVSPA-LALMPPQYYVSAVDIGLLHLGCLVLPQ------------ 264 (342)
T ss_dssp EEEESEEECCCSCTTT----CCCHHHHHHHHHHTTCCCHH-HHTCCSEEEEEHHHHHHHHHHHHHCTT------------
T ss_pred eecccceeCCCCCccc----cccchHHHHHHHHcCCcCcc-cCCccceeeeeHHHHHHHHHHhhcCcc------------
Confidence 9999999998654321 11223455555666653322 234566899999999999998887643
Q ss_pred CCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 507 VAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 507 ~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+..||++++ ..++|.|++++|.+.++
T Consensus 265 -------~~g~~~~~~~--~~~t~~eia~~i~k~~p 291 (342)
T d1y1pa1 265 -------IERRRVYGTA--GTFDWNTVLATFRKLYP 291 (342)
T ss_dssp -------CCSCEEEECC--EEECHHHHHHHHHHHCT
T ss_pred -------ccceEEEEcC--CceEHHHHHHHHHHHcC
Confidence 2445667777 78999999999999875
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.88 E-value=6.5e-22 Score=204.51 Aligned_cols=256 Identities=14% Similarity=0.080 Sum_probs=168.8
Q ss_pred EEeCCCCcccHHHHHHHHhhhh--h--HH--------HhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc--ccc
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDE--L--FD--------RLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH--HIH 306 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~--~--~~--------~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd 306 (596)
+||.+.+|.-+..-+..++..+ + ++ .+.. .+.....++.++.|||++. +.+..++. ++|
T Consensus 4 ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~-~~~~~~~~v~~~~~Dl~d~------~~l~~~~~~~~~d 76 (347)
T d1z45a2 4 VLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVAR-LEVLTKHHIPFYEVDLCDR------KGLEKVFKEYKID 76 (347)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHH-HHHHHTSCCCEEECCTTCH------HHHHHHHHHSCCC
T ss_pred EEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHh-HHhhcccCCeEEEeecCCH------HHHHHHHhccCCC
Confidence 5666666666666555555431 1 10 0000 1112236899999999964 34777665 689
Q ss_pred EEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhc
Q psy5825 307 VIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQT 383 (596)
Q Consensus 307 ~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~ 383 (596)
+||||||.+.... ....++.+|+.||.+|+++|+. .++++|||+||..|||........ .+
T Consensus 77 ~VihlAa~~~~~~~~~~~~~~~~~N~~~t~~ll~~~~~-~~i~~~i~~SS~~vyg~~~~~~~~---~~------------ 140 (347)
T d1z45a2 77 SVIHFAGLKAVGESTQIPLRYYHNNILGTVVLLELMQQ-YNVSKFVFSSSATVYGDATRFPNM---IP------------ 140 (347)
T ss_dssp EEEECCSCCCHHHHHHSHHHHHHHHHHHHHHHHHHHHH-HTCCEEEEEEEGGGGCCGGGSTTC---CS------------
T ss_pred EEEEccccccccccccCcccccccchhhhHHHHHHHHh-cccceEEeecceeeecCcccCCCC---Cc------------
Confidence 9999999876433 3346888999999999999998 589999999999999964311000 00
Q ss_pred CChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh----cCCCEEEecCCccccCCCCCccccCC--CCCCcHHHHHH
Q psy5825 384 TNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL----YKLPLAMVRPSIVVSTWKEPIVGWSN--NLYGPGGAAAG 457 (596)
Q Consensus 384 ~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~----~gl~~~IlRp~~V~G~~~~p~~G~~~--~~~~~~~l~~~ 457 (596)
+++. .+ .. ..+.|+.||+++|++++.+. .+++++++||++|||+...+..|... .......++..
T Consensus 141 ~~e~-----~~---~~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~~lR~~~v~g~~~~~~~g~~~~~~~~~~~~~~~~ 211 (347)
T d1z45a2 141 IPEE-----CP---LG-PTNPYGHTKYAIENILNDLYNSDKKSWKFAILRYFNPIGAHPSGLIGEDPLGIPNNLLPYMAQ 211 (347)
T ss_dssp BCTT-----SC---CC-CCSHHHHHHHHHHHHHHHHHHHSTTSCEEEEEEECEEECCCTTSSCCCCCSSSCCSHHHHHHH
T ss_pred cccc-----cC---CC-CCChhHhHHHHHHHHHHHHHHhhccCCcEEEEeecceEeecCCCccCCCccccHHHHHHHHHH
Confidence 0000 00 01 34789999999999999875 67999999999999987654433211 11122334444
Q ss_pred HHhccc--eEeecC------CCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCccc
Q psy5825 458 AALGLI--HTFYAK------HDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPIT 529 (596)
Q Consensus 458 ~~~g~~--~~~~~~------~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt 529 (596)
.+.+.- ..++|+ +....|++++.+++.+++.++....... .....+++||++++ .+++
T Consensus 212 ~~~~~~~~i~i~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~~~Ni~~~--~~~s 277 (347)
T d1z45a2 212 VAVGRREKLYIFGDDYDSRDGTPIRDYIHVVDLAKGHIAALQYLEAYN------------ENEGLCREWNLGSG--KGST 277 (347)
T ss_dssp HHTTSSSCCCCC------CCSSCEECEEEHHHHHHHHHHHHHHHHHSC------------TTCCEEEEEEESCS--CCEE
T ss_pred HHhcCCCCeEEeCCCccccCCceeeeeeeeeccccccccccccccccc------------ccccccccceecCC--Cccc
Confidence 433321 123333 4556789999999999988877543311 00024679999999 8999
Q ss_pred HHHHHHHHHHHcc
Q psy5825 530 WLEYMNSVQAAGK 542 (596)
Q Consensus 530 ~~el~~~l~~~~~ 542 (596)
+.++++.+.+.++
T Consensus 278 ~~e~~~~i~~~~~ 290 (347)
T d1z45a2 278 VFEVYHAFCKASG 290 (347)
T ss_dssp HHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHC
Confidence 9999999999887
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.88 E-value=2.5e-22 Score=211.24 Aligned_cols=225 Identities=11% Similarity=0.044 Sum_probs=154.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccc--cEEEEcCccCChhhh------HHHHHHHHHHHHHHHHHHHHhcCCCceE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHI--HVIIHAAASLRFDEL------IQDAFTLNIQATRELLDLATRCSQLKAI 348 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~v--d~ViH~AA~v~~~~~------~~~~~~~NV~GT~~LL~~a~~~~~vkrf 348 (596)
.+++++.|||++.. .+..++.++ |+|||+||...+... ...++.+||.||.+||++|........|
T Consensus 67 ~~i~~~~~Dl~d~~------~l~~~~~~~~~d~ViHlAa~~~~~~s~~~~~~~~~~~~~Nv~gt~nll~~~~~~~~~~~~ 140 (393)
T d1i24a_ 67 KSIELYVGDICDFE------FLAESFKSFEPDSVVHFGEQRSAPYSMIDRSRAVYTQHNNVIGTLNVLFAIKEFGEECHL 140 (393)
T ss_dssp CCCEEEESCTTSHH------HHHHHHHHHCCSEEEECCSCCCHHHHTSCHHHHHHHHHHHHHHHHHHHHHHHHHCTTCEE
T ss_pred CCcEEEEccCCCHH------HHHHHHHhhcchheeccccccccccccccccccccccccccccccHHHHHHHHhccccce
Confidence 67999999999654 488888764 999999998654322 2357889999999999999986666678
Q ss_pred EEecCcccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCE
Q psy5825 349 LHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPL 425 (596)
Q Consensus 349 V~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~ 425 (596)
|++||..+|+... ...+..... .+.......+ .... ..+.|+.||++||.++..++ .++++
T Consensus 141 i~~ss~~~~~~~~~~~~~~~~~~--------------~~~~~~~~~~-~~~~-p~~~Y~~sK~~aE~~~~~~~~~~~l~~ 204 (393)
T d1i24a_ 141 VKLGTMGEYGTPNIDIEEGYITI--------------THNGRTDTLP-YPKQ-ASSFYHLSKVHDSHNIAFTCKAWGIRA 204 (393)
T ss_dssp EEECCGGGGCCCSSCBCSSEEEE--------------EETTEEEEEE-CCCC-CCSHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred eeccccccccccccccccccccc--------------cccccccccc-cccc-cccHHHHHhhhhcccccccccccceee
Confidence 8999998887543 222211100 0000000000 0011 33689999999999999888 89999
Q ss_pred EEecCCccccCCCCCccc--cC------CCCC-C-cHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 426 AMVRPSIVVSTWKEPIVG--WS------NNLY-G-PGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 426 ~IlRp~~V~G~~~~p~~G--~~------~~~~-~-~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
+++||++|||+...+... +. +..+ . ...++..+..|....++|++.+.+||+||+|+|++++.++.+...
T Consensus 205 ~~lR~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~i~g~~~~~rd~v~v~D~~~a~~~~~~~~~~ 284 (393)
T d1i24a_ 205 TDLNQGVVYGVKTDETEMHEELRNRLDYDAVFGTALNRFCVQAAVGHPLTVYGKGGQTRGYLDIRDTVQCVEIAIANPAK 284 (393)
T ss_dssp EEEEECEEECSCCTTGGGSGGGCCCCCCSTTTCCHHHHHHHHHHHTCCEEEETTSCCEEEEEEHHHHHHHHHHHHHSCCC
T ss_pred eecccccccCCCccccccccccccccccccccccchhhhhHHhhcCCeeEEeeecccccccccccchHHHHHHHHHhhcc
Confidence 999999999987643210 00 0001 1 234455566676667789999999999999999999999875432
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+. |++.++....+++.+|++++.+++.
T Consensus 285 ------------------~g~-~~~~~~~~~~~si~el~~~i~~~~~ 312 (393)
T d1i24a_ 285 ------------------AGE-FRVFNQFTEQFSVNELASLVTKAGS 312 (393)
T ss_dssp ------------------TTC-EEEEEECSEEEEHHHHHHHHHHHHH
T ss_pred ------------------cce-eeeecCCCCeeEHHHHHHHHHHHHH
Confidence 233 3332211267899999999988765
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.88 E-value=1.5e-21 Score=201.54 Aligned_cols=214 Identities=16% Similarity=0.143 Sum_probs=154.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.+||++.. .+..++.+ +++|||+||..+... .+...+.+||.||.+|+++|.. .++++|||+
T Consensus 58 ~~~~~~~~Dl~d~~------~l~~~~~~~~~~~i~h~Aa~~~~~~~~~~p~~~~~~Nv~gt~~l~~~~~~-~~v~~~i~~ 130 (346)
T d1ek6a_ 58 RSVEFEEMDILDQG------ALQRLFKKYSFMAVIHFAGLKAVGESVQKPLDYYRVNLTGTIQLLEIMKA-HGVKNLVFS 130 (346)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHCCEEEEEECCSCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEE
T ss_pred CCcEEEEeeccccc------cccccccccccccccccccccCcHhhHhCHHHHHHhhhcccccccchhhh-cCccccccc
Confidence 68999999999653 36666654 568999999876443 2345789999999999999998 689999999
Q ss_pred cCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh---cCCCEEEe
Q psy5825 352 STLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL---YKLPLAMV 428 (596)
Q Consensus 352 SS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~---~gl~~~Il 428 (596)
||..+||.......... .+ ... ..+.|+.+|+.+|+++..++ .+++++++
T Consensus 131 ss~~~~~~~~~~~~~~~------------------------~~--~~~-~~~~Y~~~k~~~e~~~~~~~~~~~~~~~~~l 183 (346)
T d1ek6a_ 131 SSATVYGNPQYLPLDEA------------------------HP--TGG-CTNPYGKSKFFIEEMIRDLCQADKTWNAVLL 183 (346)
T ss_dssp EEGGGGCSCSSSSBCTT------------------------SC--CCC-CSSHHHHHHHHHHHHHHHHHHHCTTCEEEEE
T ss_pred ccceeeecccccccccc------------------------cc--ccc-cCChHHHHHHHHHHHHHHHHHhccCCceEEE
Confidence 99999987541111000 00 011 34679999999999999876 68999999
Q ss_pred cCCccccCCCCCccccCCC--CCCcHHHHHHHHhc--cceEeec------CCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 429 RPSIVVSTWKEPIVGWSNN--LYGPGGAAAGAALG--LIHTFYA------KHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 429 Rp~~V~G~~~~p~~G~~~~--~~~~~~l~~~~~~g--~~~~~~~------~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
||++|||+...+..|+... ......++.....+ ....+.+ ++.+.+||+||+|+|.++..++......
T Consensus 184 R~~~v~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~i~g~~~~~~~g~~~Rdfi~v~D~a~~~~~~~~~~~~~-- 261 (346)
T d1ek6a_ 184 RYFNPTGAHASGCIGEDPQGIPNNLMPYVSQVAIGRREALNVFGNDYDTEDGTGVRDYIHVVDLAKGHIAALRKLKEQ-- 261 (346)
T ss_dssp EECEEECCCTTSSCCCCCSSSCCSHHHHHHHHHHTSSSCEEEECSCSSSSSSSCEECEEEHHHHHHHHHHHHHHHTTT--
T ss_pred eecceeccCCCCCcCccccccHHHHHHHHHHHHHcCCCcEEEcCCcccCCCCCeeEeEEEEEeccchhhhhccccccc--
Confidence 9999999876543332211 11122333333332 2222322 3566789999999999998887664431
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++|||+++ ..+++.|+++.|.+.++
T Consensus 262 --------------~~~~i~Ni~~~--~~~s~~dl~~~i~~~~~ 289 (346)
T d1ek6a_ 262 --------------CGCRIYNLGTG--TGYSVLQMVQAMEKASG 289 (346)
T ss_dssp --------------CCEEEEEECCS--CCEEHHHHHHHHHHHHC
T ss_pred --------------cCceEEEeCCC--CcccHHHHHHHHHHHhC
Confidence 35679999999 89999999999999988
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.87 E-value=7.6e-22 Score=203.49 Aligned_cols=204 Identities=14% Similarity=-0.002 Sum_probs=149.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcC--CCceEE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCS--QLKAIL 349 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~--~vkrfV 349 (596)
.++.++.|||+++.. +..++.. +++|+|+||...... ....++++|+.||.+|+++|.++. ++.+||
T Consensus 56 ~~~~~~~~Dl~d~~~------~~~~~~~~~~~~v~~~~a~~~~~~~~~~~~~~~~~Nv~gt~~ll~~~~~~~~~~~~~~i 129 (347)
T d1t2aa_ 56 GNMKLHYGDLTDSTC------LVKIINEVKPTEIYNLGAQSHVKISFDLAEYTADVDGVGTLRLLDAVKTCGLINSVKFY 129 (347)
T ss_dssp -CEEEEECCTTCHHH------HHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHTTCTTTCEEE
T ss_pred CCcEEEEeecCCchh------hHHHHhhcccceeeeeeeccccchhhccchhhhhhHHHHHHHHHHHHHHcCCCCCcEEE
Confidence 579999999997653 7777754 579999999876543 334578999999999999999842 335899
Q ss_pred EecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCE
Q psy5825 350 HVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPL 425 (596)
Q Consensus 350 ~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~ 425 (596)
|+||++|||... .+.|+... . ..+.|+.||++||++++.++ .++++
T Consensus 130 ~~SS~~vyg~~~~~~~~E~~~~-----------------------------~-P~~~Yg~sK~~aE~~~~~~~~~~~~~~ 179 (347)
T d1t2aa_ 130 QASTSELYGKVQEIPQKETTPF-----------------------------Y-PRSPYGAAKLYAYWIVVNFREAYNLFA 179 (347)
T ss_dssp EEEEGGGTCSCSSSSBCTTSCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCEE
T ss_pred EecchheecCCCCCCCCCCCCC-----------------------------C-CCCHHHHHHHHHHHHHHHHHHHhCCCE
Confidence 999999999643 33332211 0 23679999999999999987 89999
Q ss_pred EEecCCccccCCCCCccccCCCCCCcHHHHHHHH-hccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCC
Q psy5825 426 AMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAA-LGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPA 504 (596)
Q Consensus 426 ~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~-~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~ 504 (596)
+|+||++|||+...+..+ .......+.... .+....++|++...++|+||+|+|.+++.++...
T Consensus 180 ~ilr~~~vyGp~~~~~~~----~~~~~~~i~~~~~~~~~~~~~g~g~~~r~~i~v~D~~~a~~~~~~~~----------- 244 (347)
T d1t2aa_ 180 VNGILFNHESPRRGANFV----TRKISRSVAKIYLGQLECFSLGNLDAKRDWGHAKDYVEAMWLMLQND----------- 244 (347)
T ss_dssp EEEEECCEECTTSCTTSH----HHHHHHHHHHHHHTSCSCEEESCTTCEECCEEHHHHHHHHHHHHHSS-----------
T ss_pred EEEEecceeCCCCCCCcc----ccccceeeehhhcCCcceeecCCCcceeeeeEecHHHHHHHHHhhcC-----------
Confidence 999999999985422100 000111122222 2233456788999999999999999999998753
Q ss_pred CcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 505 SLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 505 ~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
....|+++.. ...++.++...+...++
T Consensus 245 ---------~~~~~~~~~~--~~~~~~~~~~~~~~~~~ 271 (347)
T d1t2aa_ 245 ---------EPEDFVIATG--EVHSVREFVEKSFLHIG 271 (347)
T ss_dssp ---------SCCCEEECCS--CCEEHHHHHHHHHHHTT
T ss_pred ---------CCccceeccc--cccccchhhhhhhhhhc
Confidence 2457888887 78899999998888776
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=99.87 E-value=1.8e-21 Score=203.95 Aligned_cols=226 Identities=12% Similarity=0.015 Sum_probs=153.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEE
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILH 350 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~ 350 (596)
.++.++.|||++... +..++. ++|+|||+||.+.... .....+.+|+.||.++|++|.. .++++|++
T Consensus 69 ~~~~~~~~Di~d~~~------l~~~~~~~~~~d~ViH~Aa~~~~~~~~~~~~~~~~~N~~~t~~~l~~~~~-~~~~~~~~ 141 (383)
T d1gy8a_ 69 RYAALEVGDVRNEDF------LNGVFTRHGPIDAVVHMCAFLAVGESVRDPLKYYDNNVVGILRLLQAMLL-HKCDKIIF 141 (383)
T ss_dssp CCCEEEESCTTCHHH------HHHHHHHSCCCCEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEE
T ss_pred cceEEEECcccCHHH------hhhhhhccceeehhhcccccccccccccccccccccccccccccchhhhc-cCCccccc
Confidence 578999999997643 676664 5799999999876543 2345788999999999999998 68999999
Q ss_pred ecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEe
Q psy5825 351 VSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMV 428 (596)
Q Consensus 351 vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~Il 428 (596)
+||.++|+............++ .++ .+ .. +.+.|+.||+++|+++..+. .|++++++
T Consensus 142 ~~s~~~~~~~~~~~~~~~~~~~------------~e~-----~~---~~-p~~~Y~~sK~~~e~~~~~~~~~~gl~~~~l 200 (383)
T d1gy8a_ 142 SSSAAIFGNPTMGSVSTNAEPI------------DIN-----AK---KS-PESPYGESKLIAERMIRDCAEAYGIKGICL 200 (383)
T ss_dssp EEEGGGTBSCCC-----CCCCB------------CTT-----SC---CB-CSSHHHHHHHHHHHHHHHHHHHHCCEEEEE
T ss_pred cccccccccccccccccccccc------------ccc-----cC---CC-CCCHHHhhHhHHHHHHHHHHHHhCCCEEEE
Confidence 9999998864311000000000 000 00 01 34779999999999999988 89999999
Q ss_pred cCCccccCCCCCcc-ccCCCCCCcHH-HHHHHHhc----------------cceEee------cCCCCccccccHHHHHH
Q psy5825 429 RPSIVVSTWKEPIV-GWSNNLYGPGG-AAAGAALG----------------LIHTFY------AKHDKKCDLIPVDVATN 484 (596)
Q Consensus 429 Rp~~V~G~~~~p~~-G~~~~~~~~~~-l~~~~~~g----------------~~~~~~------~~~~~~~d~ipVDdva~ 484 (596)
||++|||+...+.. .+......... ++..++.+ ....+. +++.+.+||+||+|+|.
T Consensus 201 R~~~vyG~~~~~~~~~~~~~~~~~ip~ii~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~dg~~~Rdfi~v~D~~~ 280 (383)
T d1gy8a_ 201 RYFNACGAHEDGDIGEHYQGSTHLIPIILGRVMSDIAPDQRLTIHEDASTDKRMPIFGTDYPTPDGTCVRDYVHVCDLAS 280 (383)
T ss_dssp EECEEECCCTTSSCSCCSTTCCSHHHHHHHHHHHHHSCC-----------CCCEEEECSCSSSTTSSCEECEEEHHHHHH
T ss_pred ecceeeccCccccccccccccchhHHHHHHHHHhhccccccchhhhhhhcCCceEEeCCccccCCCCeEEeeEEHHHHHH
Confidence 99999998765421 11111111112 12222111 111122 24677789999999999
Q ss_pred HHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 485 MMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 485 aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+++.++....... .... ...+++|||+++ .++++.+|+..+.+.++
T Consensus 281 a~~~~~~~~~~~~-------~~~~---~~~~~i~Ni~s~--~~~s~~el~~~i~~~~~ 326 (383)
T d1gy8a_ 281 AHILALDYVEKLG-------PNDK---SKYFSVFNLGTS--RGYSVREVIEVARKTTG 326 (383)
T ss_dssp HHHHHHHHHHTCC-------TTTG---GGSEEEEEESCS--CCEEHHHHHHHHHHHHC
T ss_pred HHHHHHhhhcccc-------cccc---ccCccEEEeCCC--CceeHHHHHHHHHHHhC
Confidence 9999987643211 0000 024679999999 89999999999999887
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.87 E-value=1.6e-21 Score=198.87 Aligned_cols=204 Identities=13% Similarity=-0.023 Sum_probs=153.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.++.++.+||++... +..++.. .++|+|+|+...... ....++.+|+.||.+||++|.......+|+|+
T Consensus 49 ~~~~~~~~Dl~d~~~------~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~n~~g~~~~l~~~~~~~~~~~~i~~ 122 (321)
T d1rpna_ 49 GDIQYEDGDMADACS------VQRAVIKAQPQEVYNLAAQSFVGASWNQPVTTGVVDGLGVTHLLEAIRQFSPETRFYQA 122 (321)
T ss_dssp GGEEEEECCTTCHHH------HHHHHHHHCCSEEEECCSCCCHHHHTTSHHHHHHHHTHHHHHHHHHHHHHCTTSEEEEE
T ss_pred CCcEEEEccccChHH------hhhhhccccccccccccccccccccccchHHHHhhhhhchHHHHHHHHHhCCCcccccc
Confidence 579999999997543 6655544 578999998876443 34568899999999999999986666789999
Q ss_pred cCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEE
Q psy5825 352 STLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAM 427 (596)
Q Consensus 352 SS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~I 427 (596)
||+.+||... .++|+... . ..+.|+.||.++|+++..++ .++++++
T Consensus 123 Ss~~~~~~~~~~~~~E~~~~-----------------------------~-p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ 172 (321)
T d1rpna_ 123 STSEMFGLIQAERQDENTPF-----------------------------Y-PRSPYGVAKLYGHWITVNYRESFGLHASS 172 (321)
T ss_dssp EEGGGGCSCSSSSBCTTSCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCCEEE
T ss_pred cchhhcCcccCCCCCCCCCc-----------------------------c-ccChhHHHHHHHHHHHHHHHhhcCCcEEE
Confidence 9999998643 22232110 1 34679999999999999988 8999999
Q ss_pred ecCCccccCCCCCccccCCCCCCcHHHHHHHHhcc-ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCc
Q psy5825 428 VRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGL-IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASL 506 (596)
Q Consensus 428 lRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~-~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~ 506 (596)
+||++|||+...+ + .....+..++..+..|. ...+.|++++.++|+||+|+|++++.++...
T Consensus 173 lr~~~vyGp~~~~---~-~~~~~i~~~~~~~~~~~~~~i~~g~g~~~r~~i~v~D~~~~~~~~~~~~------------- 235 (321)
T d1rpna_ 173 GILFNHESPLRGI---E-FVTRKVTDAVARIKLGKQQELRLGNVDAKRDWGFAGDYVEAMWLMLQQD------------- 235 (321)
T ss_dssp EEECCEECTTSCT---T-SHHHHHHHHHHHHHTTSCSCEEESCTTCEEECEEHHHHHHHHHHHHHSS-------------
T ss_pred EEEecccCCCccc---c-ccHHHHHHHHHHHHhCCCCcEEECCCCeEEccEEeHHHHHHHHHHHhcC-------------
Confidence 9999999985421 0 00011223344444443 3445788999999999999999999998653
Q ss_pred CCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 507 VAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 507 ~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+.+||++++ ..+++.+++..+...++
T Consensus 236 -------~~~~~ni~~~--~~~s~~~~~~~~~~~~~ 262 (321)
T d1rpna_ 236 -------KADDYVVATG--VTTTVRDMCQIAFEHVG 262 (321)
T ss_dssp -------SCCCEEECCS--CEEEHHHHHHHHHHTTT
T ss_pred -------CcCCceeccc--ccceehhhhHHHHHHhC
Confidence 3568999999 89999999999999877
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=99.84 E-value=5.4e-20 Score=186.93 Aligned_cols=245 Identities=12% Similarity=0.049 Sum_probs=164.2
Q ss_pred EEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChh
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFD 318 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~ 318 (596)
+||.+.+|.-+..-+..+++.+ ...++..+..+.++ ++...+..++. .+|+|||+|+.+...
T Consensus 5 IlITG~tGfiG~~l~~~L~~~g---------------~~vi~~~~~~~~~~-~~~~~~~~~~~~~~~d~v~~~a~~~~~~ 68 (315)
T d1e6ua_ 5 VFIAGHRGMVGSAIRRQLEQRG---------------DVELVLRTRDELNL-LDSRAVHDFFASERIDQVYLAAAKVGGI 68 (315)
T ss_dssp EEEETTTSHHHHHHHHHHTTCT---------------TEEEECCCTTTCCT-TCHHHHHHHHHHHCCSEEEECCCCCCCH
T ss_pred EEEEcCCcHHHHHHHHHHHHCc---------------CEEEEecCchhccc-cCHHHHHHHHhhcCCCEEEEcchhcccc
Confidence 5888888888877766665432 12222222222222 34555666654 479999999887533
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhh
Q psy5825 319 ----ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEIL 392 (596)
Q Consensus 319 ----~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~ 392 (596)
.....++.+||.||.+||++|.. .++++|||+||.+|||... .+.|+... ..
T Consensus 69 ~~~~~~~~~~~~~Nv~gt~~ll~~a~~-~~v~~~i~~SS~~vyg~~~~~~~~E~~~~---------------------~~ 126 (315)
T d1e6ua_ 69 VANNTYPADFIYQNMMIESNIIHAAHQ-NDVNKLLFLGSSCIYPKLAKQPMAESELL---------------------QG 126 (315)
T ss_dssp HHHHHCHHHHHHHHHHHHHHHHHHHHH-TTCCEEEEECCGGGSCTTCCSSBCGGGTT---------------------SS
T ss_pred ccchhhHHHHHHHHHHHHHHHHHHHHH-cCCCEEEEECCceEcCCCCCCCccCCccc---------------------cC
Confidence 33456788999999999999998 6899999999999999643 33442110 00
Q ss_pred hhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcHHH-----HHHHHhccceE
Q psy5825 393 SSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGA-----AAGAALGLIHT 465 (596)
Q Consensus 393 ~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l-----~~~~~~g~~~~ 465 (596)
++. . ..+.|+.||++||++++.+. .|++++|+||++|||++...... ....+..+ +.....+....
T Consensus 127 ~~~---~-~~~~Y~~sK~~~E~~~~~~~~~~gl~~~ilR~~~vyGp~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~ 199 (315)
T d1e6ua_ 127 TLE---P-TNEPYAIAKIAGIKLCESYNRQYGRDYRSVMPTNLYGPHDNFHPS---NSHVIPALLRRFHEATAQKAPDVV 199 (315)
T ss_dssp CCC---G-GGHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECEEESTTCCCCTT---CSSHHHHHHHHHHHHHHHTCSEEE
T ss_pred CCC---C-CCCHHHHHHHHHHHHHHHHHHHhCCCEEEEeeccEECCCCCCCcc---ccccceeeeccchhhhhccCCceE
Confidence 000 0 12469999999999999988 79999999999999986532110 11111111 12222333445
Q ss_pred eecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 466 FYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 466 ~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
+++++...++|++|+|++.++..++....... ... ......++|++.+ .++++.+++..+...++
T Consensus 200 ~~g~g~~~~~~~~v~d~~~~~~~~~~~~~~~~---------~~~-~~~~~~~~~~~~~--~~~~i~~~~~~i~~~~~ 264 (315)
T d1e6ua_ 200 VWGSGTPMREFLHVDDMAAASIHVMELAHEVW---------LEN-TQPMLSHINVGTG--VDCTIRELAQTIAKVVG 264 (315)
T ss_dssp EESCSCCEECEEEHHHHHHHHHHHHHSCHHHH---------HHT-SBTTBCCEEESCS--CCEEHHHHHHHHHHHHT
T ss_pred EcCCCceEEEEEEeehhHHHHHHhhhhccccc---------ccc-ccccccccccCCC--cchHHHHHHHHHHHHhC
Confidence 66788889999999999999999886532110 000 0024678999998 88999999999999877
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.84 E-value=1.6e-20 Score=192.68 Aligned_cols=200 Identities=11% Similarity=-0.013 Sum_probs=147.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc--cccEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhc----CCCce
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH--HIHVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRC----SQLKA 347 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~--~vd~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~----~~vkr 347 (596)
..+.++.||+++.. .+..+++ ++|+||||||...... .+...+.+|+.|+.+++++|..+ ....+
T Consensus 56 ~~~~~~~~Di~~~~------~~~~~~~~~~~D~Vih~Aa~~~~~~~~~~p~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~ 129 (339)
T d1n7ha_ 56 ALMKLHYADLTDAS------SLRRWIDVIKPDEVYNLAAQSHVAVSFEIPDYTADVVATGALRLLEAVRSHTIDSGRTVK 129 (339)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHSHHHHHHHHTHHHHHHHHHHHHHHHHHCCCCE
T ss_pred cceEEEEccccCHH------HHHHHHhhhccchhhhccccccccccccCccccccccccccchhhhhhhhccccccccee
Confidence 56889999998643 3666554 5699999999987654 33468899999999999998752 23457
Q ss_pred EEEecCcccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 348 ILHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 348 fV~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
+++.||.++++... .+.|+... . +.+.|+.||+++|+++..++ .+++
T Consensus 130 ~~~~ss~~~~~~~~~~~~E~~~~-----------------------------~-p~~~Y~~sK~~~E~~~~~~~~~~~~~ 179 (339)
T d1n7ha_ 130 YYQAGSSEMFGSTPPPQSETTPF-----------------------------H-PRSPYAASKCAAHWYTVNYREAYGLF 179 (339)
T ss_dssp EEEEEEGGGGTTSCSSBCTTSCC-----------------------------C-CCSHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred eeecccceecccCCCCCCCCCCC-----------------------------C-CcchhhHHHHHHHHHHHHHHHHhCCC
Confidence 88999998887654 33332210 1 33679999999999999988 7999
Q ss_pred EEEecCCccccCCCCCccccCCCCCCcHHH----HHHHHhcc-ceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCC
Q psy5825 425 LAMVRPSIVVSTWKEPIVGWSNNLYGPGGA----AAGAALGL-IHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGH 499 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l----~~~~~~g~-~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~ 499 (596)
++|+||++|||+...+ ...... +.....|. ...+.|++.+.+||+||+|+|++++.++...
T Consensus 180 ~~ilR~~~vyGp~~~~--------~~~~~~i~~~~~~~~~~~~~~~~~g~~~~~rd~~~v~D~a~~~~~~~~~~------ 245 (339)
T d1n7ha_ 180 ACNGILFNHESPRRGE--------NFVTRKITRALGRIKVGLQTKLFLGNLQASRDWGFAGDYVEAMWLMLQQE------ 245 (339)
T ss_dssp EEEEEECCEECTTSCT--------TSHHHHHHHHHHHHHHTSCCCEEESCTTCEEECEEHHHHHHHHHHHHTSS------
T ss_pred EEEEEEccccCCCCCC--------CCCcchhhHHHHHHhcCCCCeEEeCCCCccccceeeehHHHHHHHHHhcC------
Confidence 9999999999986421 112222 22223332 3446688999999999999999999988653
Q ss_pred CCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 500 VAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 500 ~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
.+..++++.+ ..+++.++++.+...++
T Consensus 246 --------------~~~~~~~~~~--~~~s~~~~~~~~~~~~~ 272 (339)
T d1n7ha_ 246 --------------KPDDYVVATE--EGHTVEEFLDVSFGYLG 272 (339)
T ss_dssp --------------SCCEEEECCS--CEEEHHHHHHHHHHHTT
T ss_pred --------------CCCccccccc--cccccchhhhhhhhhhh
Confidence 2345666666 78999999999999887
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=99.84 E-value=3.4e-20 Score=189.51 Aligned_cols=221 Identities=13% Similarity=0.128 Sum_probs=151.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccc--cEEEEcCccCChhh---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHI--HVIIHAAASLRFDE---LIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~v--d~ViH~AA~v~~~~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.+++++.|||++.. .+..++.++ |+||||||.+.... +...++.+||.||.+||++|... ++.++|++
T Consensus 49 ~~~~~i~~Di~~~~------~l~~~~~~~~~d~Vih~aa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-~~~~~i~~ 121 (338)
T d1orra_ 49 GNFEFVHGDIRNKN------DVTRLITKYMPDSCFHLAGQVAMTTSIDNPCMDFEINVGGTLNLLEAVRQY-NSNCNIIY 121 (338)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHCCSEEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHH-CTTCEEEE
T ss_pred CCcEEEEcccCCHH------HHHHHHHhcCCceEEeecccccccccccChHHHHHHHHHHHHHHHHhhhcc-cccccccc
Confidence 68999999999654 478887765 99999999987654 34568899999999999999985 56666666
Q ss_pred cCcccc-cCCcc--cccc--ccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCC
Q psy5825 352 STLYTH-SYRED--IQEE--FYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLP 424 (596)
Q Consensus 352 SS~~v~-g~~~~--i~E~--~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~ 424 (596)
||.+++ +.... ..+. ..+....+. ......+ .. ..+.|+.+|+.+|.++..+. .++.
T Consensus 122 sS~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~~~~~~---~~-~~~~y~~~k~~~e~~~~~~~~~~~~~ 185 (338)
T d1orra_ 122 SSTNKVYGDLEQYKYNETETRYTCVDKPN------------GYDESTQ---LD-FHSPYGCSKGAADQYMLDYARIFGLN 185 (338)
T ss_dssp EEEGGGGTTCTTSCEEECSSCEEETTCTT------------CBCTTSC---CC-CCHHHHHHHHHHHHHHHHHHHHHCCE
T ss_pred ccccccccccccccccccccccccccccc------------CcccCCc---cc-cccccccccchhhhhhhhhhhccCcc
Confidence 665554 43221 1100 000000000 0000000 00 23679999999999998877 8999
Q ss_pred EEEecCCccccCCCCCccccCCCCCCc-HHHHHHHHh-----ccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCC
Q psy5825 425 LAMVRPSIVVSTWKEPIVGWSNNLYGP-GGAAAGAAL-----GLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHG 498 (596)
Q Consensus 425 ~~IlRp~~V~G~~~~p~~G~~~~~~~~-~~l~~~~~~-----g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~ 498 (596)
.+++|+++|||+...+. ...+. ..++..+.. +....++|++...+||+||+|+|++++.++.....
T Consensus 186 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~g~g~~~r~~~~v~D~~~~~~~~l~~~~~--- 257 (338)
T d1orra_ 186 TVVFRHSSMYGGRQFAT-----YDQGWVGWFCQKAVEIKNGINKPFTISGNGKQVRDVLHAEDMISLYFTALANVSK--- 257 (338)
T ss_dssp EEEEEECCEECTTCCCB-----TTBCHHHHHHHHHHHHHTTCCCCEEEESSSCCEEECEEHHHHHHHHHHHHHTHHH---
T ss_pred cccccccceeecccccc-----ccccccchhhHHHHHHHhccCCceEEeCCCceeEeeecccchhhHHHHHHhcccc---
Confidence 99999999998754321 11222 233333222 23345678899999999999999999999876543
Q ss_pred CCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 499 HVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 499 ~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
..+++||+..+....+++.+++..+...++
T Consensus 258 --------------~~~~~~~i~~~~~~~~s~~e~~~~i~~~~~ 287 (338)
T d1orra_ 258 --------------IRGNAFNIGGTIVNSLSLLELFKLLEDYCN 287 (338)
T ss_dssp --------------HTTCEEEESSCGGGEEEHHHHHHHHHHHHT
T ss_pred --------------ccCccccccccccccccHHHHHHHHHHHHC
Confidence 247899996654478999999999999887
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.74 E-value=2.8e-18 Score=167.02 Aligned_cols=154 Identities=17% Similarity=0.103 Sum_probs=116.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
..+.++.+|+.+.. ++..++.++|+|||||+......+...++.+|+.++.+++++|.. .++++|||+||.++
T Consensus 59 ~~i~~~~~D~~~~~------~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~-~~v~~fi~~Ss~~~ 131 (232)
T d2bkaa1 59 KNVNQEVVDFEKLD------DYASAFQGHDVGFCCLGTTRGKAGAEGFVRVDRDYVLKSAELAKA-GGCKHFNLLSSKGA 131 (232)
T ss_dssp GGCEEEECCGGGGG------GGGGGGSSCSEEEECCCCCHHHHHHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECCTTC
T ss_pred ceeeeeeecccccc------cccccccccccccccccccccccchhhhhhhcccccceeeecccc-cCccccccCCcccc
Confidence 56888889988643 477788999999999998877777788999999999999999999 68999999999987
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCC-EEEecCCcccc
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLP-LAMVRPSIVVS 435 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~-~~IlRp~~V~G 435 (596)
++. ..+.|+.+|+.+|.++... +++ ++|||||+|||
T Consensus 132 ~~~-----------------------------------------~~~~Y~~~K~~~E~~l~~~--~~~~~~IlRP~~i~G 168 (232)
T d2bkaa1 132 DKS-----------------------------------------SNFLYLQVKGEVEAKVEEL--KFDRYSVFRPGVLLC 168 (232)
T ss_dssp CTT-----------------------------------------CSSHHHHHHHHHHHHHHTT--CCSEEEEEECCEEEC
T ss_pred ccC-----------------------------------------ccchhHHHHHHhhhccccc--cccceEEecCceeec
Confidence 653 2356999999999998775 565 89999999999
Q ss_pred CCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 436 TWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 436 ~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+.... . +...+.... +..++ ........|||+|+|++|+.++...
T Consensus 169 ~~~~~--------~-~~~~~~~~~---~~~~~-~~~~~~~~I~~~dvA~a~i~~~~~~ 213 (232)
T d2bkaa1 169 DRQES--------R-PGEWLVRKF---FGSLP-DSWASGHSVPVVTVVRAMLNNVVRP 213 (232)
T ss_dssp TTGGG--------S-HHHHHHHHH---HCSCC-TTGGGGTEEEHHHHHHHHHHHHTSC
T ss_pred CCCcC--------c-HHHHHHHHH---hhccC-CcccCCCeEEHHHHHHHHHHHHhcC
Confidence 74321 1 111111211 11222 2333445799999999999888654
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=99.73 E-value=3.6e-17 Score=168.39 Aligned_cols=209 Identities=15% Similarity=0.047 Sum_probs=146.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEe
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHV 351 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~v 351 (596)
.+++++.|||+++. .+..++.. +|+|||+||..... .....++.+|+.||.++|++|........++++
T Consensus 56 ~~i~~~~~Dl~d~~------~l~~~~~~~~~~~v~~~aa~~~~~~~~~~~~~~~~~Nv~g~~n~l~~~~~~~~~~~~~~~ 129 (356)
T d1rkxa_ 56 DGMQSEIGDIRDQN------KLLESIREFQPEIVFHMAAQPLVRLSYSEPVETYSTNVMGTVYLLEAIRHVGGVKAVVNI 129 (356)
T ss_dssp TTSEEEECCTTCHH------HHHHHHHHHCCSEEEECCSCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHHCCCCEEEEE
T ss_pred cCCeEEEeeccChH------hhhhhhhhchhhhhhhhhccccccccccCCccccccccccchhhhhhhhccccccccccc
Confidence 57999999999754 36666654 59999999987643 334568899999999999999986666777777
Q ss_pred cCcccccCCc---cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--------
Q psy5825 352 STLYTHSYRE---DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-------- 420 (596)
Q Consensus 352 SS~~v~g~~~---~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-------- 420 (596)
||..+++... ..+++. + .. ..+.|+.+|+.+|.++..+.
T Consensus 130 s~~~~~~~~~~~~~~~~~~--------------------------~---~~-p~~~y~~~k~~~e~~~~~~~~~~~~~~~ 179 (356)
T d1rkxa_ 130 TSDKCYDNKEWIWGYRENE--------------------------A---MG-GYDPYSNSKGCAELVTSSYRNSFFNPAN 179 (356)
T ss_dssp CCGGGBCCCCSSSCBCTTS--------------------------C---BC-CSSHHHHHHHHHHHHHHHHHHHHSCGGG
T ss_pred ccccccccccccccccccc--------------------------c---cC-CCCccccccccchhhhhHHhhhcccchh
Confidence 7766665432 111110 0 00 23679999999998887643
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
.++.++++||++|||+...+. ......+.....+....+++.+...++|+||+|+|.|++.++.......
T Consensus 180 ~~~~~~~~~~~r~~~vyGp~~~~~-------~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~a~~~~~~~~~~~~ 252 (356)
T d1rkxa_ 180 YGQHGTAVATVRAGNVIGGGDWAL-------DRIVPDILRAFEQSQPVIIRNPHAIRPWQHVLEPLSGYLLLAQKLYTDG 252 (356)
T ss_dssp HHHHCCEEEEEECCCEECTTCCCS-------SCHHHHHHHHHHTTCCEECSCTTCEECCEETHHHHHHHHHHHHHHHHTC
T ss_pred ccccCceEEeccCCCeeCCCcchh-------hHHHHHHHHHHhCCCceEEeeccccccccccccccchhhhhhhhhcccc
Confidence 468899999999999864221 1223333334444445567788899999999999999999887754311
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
...+..++++.+....+++.+++..+...++
T Consensus 253 --------------~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 283 (356)
T d1rkxa_ 253 --------------AEYAEGWNFGPNDADATPVKNIVEQMVKYWG 283 (356)
T ss_dssp --------------GGGCSEEECCCCGGGCEEHHHHHHHHHHHHC
T ss_pred --------------cccccccccccccccccccchhhhhhHHHhC
Confidence 0123344444332378899999999999887
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=99.73 E-value=3.3e-16 Score=155.36 Aligned_cols=217 Identities=16% Similarity=0.116 Sum_probs=156.9
Q ss_pred EEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhcc--ccEEEEcCccCChh
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHH--IHVIIHAAASLRFD 318 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~--vd~ViH~AA~v~~~ 318 (596)
+||.+.+|.-+..-+..+.. ...+++..|..+.++ .+...+..++++ .|+||||||.....
T Consensus 4 IlItGasGfiG~~l~~~L~~----------------~g~~Vi~~~r~~~D~-~d~~~~~~~l~~~~~d~vih~a~~~~~~ 66 (281)
T d1vl0a_ 4 ILITGANGQLGREIQKQLKG----------------KNVEVIPTDVQDLDI-TNVLAVNKFFNEKKPNVVINCAAHTAVD 66 (281)
T ss_dssp EEEESTTSHHHHHHHHHHTT----------------SSEEEEEECTTTCCT-TCHHHHHHHHHHHCCSEEEECCCCCCHH
T ss_pred EEEECCCCHHHHHHHHHHHh----------------CCCEEEEeechhccC-CCHHHHHHHHHHcCCCEEEeeccccccc
Confidence 68888888777654444322 345666666655433 245556777764 59999999987644
Q ss_pred h---hHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHHhhh
Q psy5825 319 E---LIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELEILS 393 (596)
Q Consensus 319 ~---~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~ 393 (596)
. .......+|+.++.+++.++.. ....++++||..||+... ...|...+
T Consensus 67 ~~~~~~~~~~~~n~~~~~~~~~~~~~--~~~~~~~~ss~~v~~~~~~~~~~e~~~~------------------------ 120 (281)
T d1vl0a_ 67 KCEEQYDLAYKINAIGPKNLAAAAYS--VGAEIVQISTDYVFDGEAKEPITEFDEV------------------------ 120 (281)
T ss_dssp HHHHCHHHHHHHHTHHHHHHHHHHHH--HTCEEEEEEEGGGSCSCCSSCBCTTSCC------------------------
T ss_pred cccccchhhccccccccccccccccc--ccccccccccceeeeccccccccccccc------------------------
Confidence 3 3355778899999999999987 457889999999988643 22221110
Q ss_pred hhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCc
Q psy5825 394 SMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKK 473 (596)
Q Consensus 394 p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~ 473 (596)
. ..+.|+.+|+.+|.++..+ +++++|+||++|||+.. +....++..+..+....+. ++..
T Consensus 121 -----~-~~~~~~~~k~~~e~~~~~~--~~~~~i~R~~~vyG~~~----------~~~~~~~~~~~~~~~~~~~--~~~~ 180 (281)
T d1vl0a_ 121 -----N-PQSAYGKTKLEGENFVKAL--NPKYYIVRTAWLYGDGN----------NFVKTMINLGKTHDELKVV--HDQV 180 (281)
T ss_dssp -----C-CCSHHHHHHHHHHHHHHHH--CSSEEEEEECSEESSSS----------CHHHHHHHHHHHCSEEEEE--SSCE
T ss_pred -----c-chhhhhhhhhHHHHHHHHh--CCCccccceeEEeCCCc----------ccccchhhhhccCCceeec--CCce
Confidence 1 3367999999999999775 78999999999999743 1123444444444433343 4688
Q ss_pred cccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 474 CDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 474 ~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
++|++|+|+|++++.++... ..++||++++ ..+|+.||+..+.+.++
T Consensus 181 ~~~i~v~D~~~~~~~~~~~~--------------------~~g~~~~~~~--~~~s~~e~~~~i~~~~g 227 (281)
T d1vl0a_ 181 GTPTSTVDLARVVLKVIDEK--------------------NYGTFHCTCK--GICSWYDFAVEIFRLTG 227 (281)
T ss_dssp ECCEEHHHHHHHHHHHHHHT--------------------CCEEEECCCB--SCEEHHHHHHHHHHHHC
T ss_pred eccchhhhhhhhhhhhhhhc--------------------ccCceeEeCC--CccchHHHHHHHHHHhC
Confidence 99999999999999998663 2359999999 89999999999999998
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=99.64 E-value=6.8e-16 Score=154.52 Aligned_cols=182 Identities=17% Similarity=0.103 Sum_probs=121.9
Q ss_pred ccccEEEEcCccCChh-hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHH
Q psy5825 303 HHIHVIIHAAASLRFD-ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAH 379 (596)
Q Consensus 303 ~~vd~ViH~AA~v~~~-~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~ 379 (596)
..+++|+|+||..... .+...+...|+.|+.+++++|.. .++ +||++||..+++... ..+++.
T Consensus 67 ~~~~~i~~~aa~~~~~~~~~~~~~~~~~~~~~~~l~~~~~-~~i-~~v~~ss~~~~~~~~~~~~~~~~------------ 132 (307)
T d1eq2a_ 67 GDVEAIFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLE-REI-PFLYASSAATYGGRTSDFIESRE------------ 132 (307)
T ss_dssp SSCCEEEECCSCCCTTCCCHHHHHHHTHHHHHHHHHHHHH-HTC-CEEEEEEGGGGTTCCSCBCSSGG------------
T ss_pred cchhhhhhhccccccccccccccccccccccccccccccc-ccc-ccccccccccccccccccccccc------------
Confidence 4578999999976544 34556788899999999999998 355 577777777765432 111110
Q ss_pred HHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--cCCCEEEecCCccccCCCCCccccCCCCCCcH-HHHH
Q psy5825 380 VMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL--YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPG-GAAA 456 (596)
Q Consensus 380 ~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~--~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~-~l~~ 456 (596)
+ .. ..+.|+.+|+++|.++..+. .+++++++||++|||+..... + ...... .++.
T Consensus 133 --------------~---~~-~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~r~~~vyGp~~~~~-~---~~~~~~~~~~~ 190 (307)
T d1eq2a_ 133 --------------Y---EK-PLNVYGYSKFLFDEYVRQILPEANSQIVGFRYFNVYGPREGHK-G---SMASVAFHLNT 190 (307)
T ss_dssp --------------G---CC-CSSHHHHHHHHHHHHHHHHGGGCSSCEEEEEECEEESSSCGGG-G---GGSCHHHHHHH
T ss_pred --------------c---cc-cccccccccchhhhhccccccccccccccccceeEeecccccc-c---ccccccccccc
Confidence 0 01 34789999999999999998 899999999999999865321 1 112222 2333
Q ss_pred HHHhccc-eEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHH
Q psy5825 457 GAALGLI-HTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMN 535 (596)
Q Consensus 457 ~~~~g~~-~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~ 535 (596)
.+..|.. ..+.|++...++|+||+|+|.+++.++... ...+||++++ ..+++.++++
T Consensus 191 ~~~~~~~~~~~~g~~~~~r~~~~v~d~~~~~~~~~~~~--------------------~~~~~~~~~~--~~~si~~i~~ 248 (307)
T d1eq2a_ 191 QLNNGESPKLFEGSENFKRDFVYVGDVADVNLWFLENG--------------------VSGIFNLGTG--RAESFQAVAD 248 (307)
T ss_dssp HHHC-------------CBCEEEHHHHHHHHHHHHHHC--------------------CCEEEEESCS--CCBCHHHHHH
T ss_pred ccccccceeeecCccceeeeeeecccHHHHHHHHhhhc--------------------cccccccccc--cchhHHHHHH
Confidence 4444433 234577888899999999999999888653 3469999999 8999999999
Q ss_pred HHHHHcc
Q psy5825 536 SVQAAGK 542 (596)
Q Consensus 536 ~l~~~~~ 542 (596)
++....+
T Consensus 249 ~i~~~~~ 255 (307)
T d1eq2a_ 249 ATLAYHK 255 (307)
T ss_dssp HC-----
T ss_pred HHHHhcC
Confidence 9987665
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=99.61 E-value=3e-14 Score=141.80 Aligned_cols=223 Identities=18% Similarity=0.101 Sum_probs=144.1
Q ss_pred EEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCC--CC-CHHHHHHHhccc--cEEEEcCccC
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSL--GI-SSHDQQFIQHHI--HVIIHAAASL 315 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~l--GL-~~~~~~~l~~~v--d~ViH~AA~v 315 (596)
+||.+.+|.-+..-+..+... -.++..+.....+ .| +...+..++.++ |+||||||.+
T Consensus 3 ILItG~tGfiG~~l~~~L~~~-----------------g~~v~~~~~~~~~~~Dl~~~~~~~~~i~~~~~D~Vih~Aa~~ 65 (298)
T d1n2sa_ 3 ILLFGKTGQVGWELQRSLAPV-----------------GNLIALDVHSKEFCGDFSNPKGVAETVRKLRPDVIVNAAAHT 65 (298)
T ss_dssp EEEECTTSHHHHHHHHHTTTT-----------------SEEEEECTTCSSSCCCTTCHHHHHHHHHHHCCSEEEECCCCC
T ss_pred EEEECCCCHHHHHHHHHHHhC-----------------CCEEEEECCCccccCcCCCHHHHHHHHHHcCCCEEEEecccc
Confidence 578888887776544443321 1222223332221 11 345577777654 9999999987
Q ss_pred Chh---hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCc--cccccccCCCCChHHHHHHHhcCChHHHH
Q psy5825 316 RFD---ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYRE--DIQEEFYPPLFSYEDLAHVMQTTNQEELE 390 (596)
Q Consensus 316 ~~~---~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~--~i~E~~~~~~~~~~~~~~~~~~~~e~~~~ 390 (596)
... ......+.+|+.++.+|+++|.. ...+++|+||..+|+... .+.|...+
T Consensus 66 ~~~~~~~~~~~~~~~n~~~~~~l~~~~~~--~~~~~~~~ss~~~~~~~~~~~~~E~~~~--------------------- 122 (298)
T d1n2sa_ 66 AVDKAESEPELAQLLNATSVEAIAKAANE--TGAWVVHYSTDYVFPGTGDIPWQETDAT--------------------- 122 (298)
T ss_dssp CHHHHTTCHHHHHHHHTHHHHHHHHHHTT--TTCEEEEEEEGGGSCCCTTCCBCTTSCC---------------------
T ss_pred cccccccCccccccccccccccchhhhhc--cccccccccccccccCCCCCCCcccccc---------------------
Confidence 643 34456889999999999999987 336799999999887543 22332111
Q ss_pred hhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCC
Q psy5825 391 ILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKH 470 (596)
Q Consensus 391 ~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~ 470 (596)
. ..+.|+.+|+.+|.++..+. ....++|++..++... ......+...+.+... +...+
T Consensus 123 --------~-p~~~y~~~k~~~e~~~~~~~--~~~~~~~~~~~~~~~~----------~~~~~~~~~~~~~~~~-~~~~~ 180 (298)
T d1n2sa_ 123 --------S-PLNVYGKTKLAGEKALQDNC--PKHLIFRTSWVYAGKG----------NNFAKTMLRLAKERQT-LSVIN 180 (298)
T ss_dssp --------C-CSSHHHHHHHHHHHHHHHHC--SSEEEEEECSEECSSS----------CCHHHHHHHHHHHCSE-EEEEC
T ss_pred --------C-CCchHhhhhhhhhhhHHhhh--cccccccccceeeccC----------Cccchhhhhhhcccce-eeccc
Confidence 0 23679999999999998764 3455666666654321 1112233333333222 22234
Q ss_pred CCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 471 DKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 471 ~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
....++++++|+++++..++....... ..+++||++++ ..+++.+++..+.....
T Consensus 181 ~~~~~~~~~~d~~~~~~~~i~~~~~~~---------------~~~~~~n~~~~--~~~~~~~~~~~i~~~~~ 235 (298)
T d1n2sa_ 181 DQYGAPTGAELLADCTAHAIRVALNKP---------------EVAGLYHLVAG--GTTTWHDYAALVFDEAR 235 (298)
T ss_dssp SCEECCEEHHHHHHHHHHHHHHHHHCG---------------GGCEEEECCCB--SCEEHHHHHHHHHHHHH
T ss_pred ceeecccccchHHHHHHHHHhhhhccc---------------cccccccccCC--CceecHHHHHHHHhhhh
Confidence 578899999999999988776433211 24789999998 88999999999987665
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=99.57 E-value=4.1e-15 Score=149.07 Aligned_cols=213 Identities=10% Similarity=0.055 Sum_probs=145.6
Q ss_pred CeEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCC
Q psy5825 237 GGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLR 316 (596)
Q Consensus 237 ~~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~ 316 (596)
..|+|++|........ ....+. .....+++++.||+.+. ..+..++.+++++||+++...
T Consensus 28 ~~V~~~~R~~~~~~~~-~~~~~~-------------~~~~~~v~~v~~d~~d~------~~~~~~~~~~~~~~~~~~~~~ 87 (312)
T d1qyda_ 28 HPTYVLFRPEVVSNID-KVQMLL-------------YFKQLGAKLIEASLDDH------QRLVDALKQVDVVISALAGGV 87 (312)
T ss_dssp CCEEEECCSCCSSCHH-HHHHHH-------------HHHTTTCEEECCCSSCH------HHHHHHHTTCSEEEECCCCSS
T ss_pred CEEEEEECCCcccchh-HHHHHh-------------hhccCCcEEEEeecccc------hhhhhhccCcchhhhhhhhcc
Confidence 4688999976544332 111110 01126799999999965 458888999999999998653
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhh
Q psy5825 317 FDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSML 396 (596)
Q Consensus 317 ~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~ 396 (596)
. ..|+.++.+++.+|.. .+..++|+.||.++++..... +
T Consensus 88 ~--------~~~~~~~~~~l~~a~~-~~~~~~v~~Ss~g~~~~~~~~-------~------------------------- 126 (312)
T d1qyda_ 88 L--------SHHILEQLKLVEAIKE-AGNIKRFLPSEFGMDPDIMEH-------A------------------------- 126 (312)
T ss_dssp S--------STTTTTHHHHHHHHHH-SCCCSEEECSCCSSCTTSCCC-------C-------------------------
T ss_pred c--------ccchhhhhHHHHHHHH-hcCCcEEEEeeccccCCCccc-------c-------------------------
Confidence 2 3477788999999998 466788888887765532100 0
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCcccc
Q psy5825 397 FGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDL 476 (596)
Q Consensus 397 ~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ 476 (596)
.. +...|..++..++.++.. .+++++|+||+.+||........+.... ...+....++++++..++|
T Consensus 127 -~~-~~~~~~~~~~~~~~~~~~--~~~~~~i~r~~~~~g~~~~~~~~~~~~~---------~~~~~~~~~~~~g~~~~~~ 193 (312)
T d1qyda_ 127 -LQ-PGSITFIDKRKVRRAIEA--ASIPYTYVSSNMFAGYFAGSLAQLDGHM---------MPPRDKVLIYGDGNVKGIW 193 (312)
T ss_dssp -CS-STTHHHHHHHHHHHHHHH--TTCCBCEEECCEEHHHHTTTSSCTTCCS---------SCCSSEECCBTTSCSEEEE
T ss_pred -cc-hhhhhhHHHHHHHHhhcc--cccceEEeccceeecCCccchhhHHHHh---------hhcccccccccccccccce
Confidence 00 234577777777776544 5899999999999997543221111100 1112223456788999999
Q ss_pred ccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 477 IPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 477 ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
|+|+|||++++.++..+.. .++.+|+++++ ..+|+.++++.+.++++
T Consensus 194 i~v~Dva~a~~~~l~~~~~-----------------~~~~~~~~~~~--~~~s~~e~~~~~~~~~g 240 (312)
T d1qyda_ 194 VDEDDVGTYTIKSIDDPQT-----------------LNKTMYIRPPM--NILSQKEVIQIWERLSE 240 (312)
T ss_dssp ECHHHHHHHHHHHTTCGGG-----------------SSSEEECCCGG--GEEEHHHHHHHHHHHHT
T ss_pred eeHHHHHHHHHHHhcCccc-----------------cCceEEEeCCC--cCCCHHHHHHHHHHHHC
Confidence 9999999999999876543 12346777777 78999999999999887
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=99.57 E-value=1.4e-15 Score=151.50 Aligned_cols=208 Identities=11% Similarity=0.073 Sum_probs=143.1
Q ss_pred CeEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCC
Q psy5825 237 GGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLR 316 (596)
Q Consensus 237 ~~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~ 316 (596)
..|+||+|.............+. ......+.++.||+.+.. .+..++.+++.|||+++..
T Consensus 28 ~~V~~l~R~~~~~~~~~~~~~~~-------------~~~~~~~~~~~~d~~~~~------~~~~~~~~~~~vi~~~~~~- 87 (307)
T d1qyca_ 28 HPTFLLVRESTASSNSEKAQLLE-------------SFKASGANIVHGSIDDHA------SLVEAVKNVDVVISTVGSL- 87 (307)
T ss_dssp CCEEEECCCCCTTTTHHHHHHHH-------------HHHTTTCEEECCCTTCHH------HHHHHHHTCSEEEECCCGG-
T ss_pred CeEEEEECCCccccchhHHHHHH-------------hhccCCcEEEEeecccch------hhhhhhhhceeeeeccccc-
Confidence 47999999765443322222111 111257899999998654 4777888999999999864
Q ss_pred hhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhh
Q psy5825 317 FDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSML 396 (596)
Q Consensus 317 ~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~ 396 (596)
|+.++.+++++|.. .++..++|.|+.+.+.......
T Consensus 88 -----------~~~~~~~~~~a~~~-~~~~~~~~~s~~~~~~~~~~~~-------------------------------- 123 (307)
T d1qyca_ 88 -----------QIESQVNIIKAIKE-VGTVKRFFPSEFGNDVDNVHAV-------------------------------- 123 (307)
T ss_dssp -----------GSGGGHHHHHHHHH-HCCCSEEECSCCSSCTTSCCCC--------------------------------
T ss_pred -----------ccchhhHHHHHHHH-hccccceeeecccccccccccc--------------------------------
Confidence 44456778888887 4778899998876544321100
Q ss_pred cCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCcccc
Q psy5825 397 FGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDL 476 (596)
Q Consensus 397 ~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ 476 (596)
. ....|...+..++.++.. .+++++|+||++|||+....+.. ++.....+....+++.++..++|
T Consensus 124 --~-~~~~~~~~~~~~~~~~~~--~~~~~~i~r~~~v~g~~~~~~~~----------~~~~~~~~~~~~~~~~~~~~~~~ 188 (307)
T d1qyca_ 124 --E-PAKSVFEVKAKVRRAIEA--EGIPYTYVSSNCFAGYFLRSLAQ----------AGLTAPPRDKVVILGDGNARVVF 188 (307)
T ss_dssp --T-THHHHHHHHHHHHHHHHH--HTCCBEEEECCEEHHHHTTTTTC----------TTCSSCCSSEEEEETTSCCEEEE
T ss_pred --c-cccccccccccccchhhc--cCCCceecccceecCCCccchhh----------hhhhhhhcccceeeecccccccC
Confidence 0 113466777777777665 48999999999999975432211 11112233344567888999999
Q ss_pred ccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 477 IPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 477 ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
|+|+|+|++++.++..+.. .++.+||++++ +.+|+.|+++.+.++++
T Consensus 189 i~v~Dva~~~~~~l~~~~~-----------------~~~~~~~~~~~--~~~s~~ei~~~~~~~~G 235 (307)
T d1qyca_ 189 VKEEDIGTFTIKAVDDPRT-----------------LNKTLYLRLPA--NTLSLNELVALWEKKID 235 (307)
T ss_dssp ECHHHHHHHHHTTSSCGGG-----------------TTEEEECCCGG--GEEEHHHHHHHHHHHTT
T ss_pred CcHHHHHHHHHHHhcChhh-----------------cCceeEEeCCC--CccCHHHHHHHHHHHHC
Confidence 9999999999998866543 23446788887 89999999999999988
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.54 E-value=1.4e-14 Score=137.55 Aligned_cols=148 Identities=12% Similarity=0.080 Sum_probs=112.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+++++.||++++ +++..++.++|+||||++....... ..+|..|+.+|+++|.+ .++++|||+||+++
T Consensus 46 ~~~~~~~gD~~d~------~~l~~al~~~d~vi~~~g~~~~~~~----~~~~~~~~~~l~~aa~~-~~v~r~i~~ss~~~ 114 (205)
T d1hdoa_ 46 RPAHVVVGDVLQA------ADVDKTVAGQDAVIVLLGTRNDLSP----TTVMSEGARNIVAAMKA-HGVDKVVACTSAFL 114 (205)
T ss_dssp CCSEEEESCTTSH------HHHHHHHTTCSEEEECCCCTTCCSC----CCHHHHHHHHHHHHHHH-HTCCEEEEECCGGG
T ss_pred cccccccccccch------hhHHHHhcCCCEEEEEeccCCchhh----hhhhHHHHHHHHHHHHh-cCCCeEEEEeeeec
Confidence 5789999999965 4588999999999999987543222 24678899999999998 68999999999998
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
++...... + ....|...|+.+|+++.. .|++++|+||+.+++.
T Consensus 115 ~~~~~~~~-----------------------------~------~~~~~~~~~~~~e~~l~~--~~~~~tiirp~~~~~~ 157 (205)
T d1hdoa_ 115 LWDPTKVP-----------------------------P------RLQAVTDDHIRMHKVLRE--SGLKYVAVMPPHIGDQ 157 (205)
T ss_dssp TSCTTCSC-----------------------------G------GGHHHHHHHHHHHHHHHH--TCSEEEEECCSEEECC
T ss_pred cCCCcccc-----------------------------c------cccccchHHHHHHHHHHh--cCCceEEEecceecCC
Confidence 87532110 0 123589999999999876 5899999999999774
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
.. . |.. .++.++.....+|+++|+|++++.++..+.
T Consensus 158 ~~---~------------------~~~-~~~~~~~~~~~~i~~~DvA~~~~~~l~~~~ 193 (205)
T d1hdoa_ 158 PL---T------------------GAY-TVTLDGRGPSRVISKHDLGHFMLRCLTTDE 193 (205)
T ss_dssp CC---C------------------SCC-EEESSSCSSCSEEEHHHHHHHHHHTTSCST
T ss_pred CC---c------------------ccE-EEeeCCCCCCCcCCHHHHHHHHHHHhCCCC
Confidence 22 1 111 233456667789999999999999886543
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=99.49 E-value=7.7e-15 Score=141.07 Aligned_cols=185 Identities=10% Similarity=0.074 Sum_probs=125.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh----------------hhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD----------------ELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~----------------~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.+++++.||+.++. .+..++.++|+|||||+..... ........+|+.|+.+++..+.
T Consensus 47 ~~~~~~~~d~~~~~------~~~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 120 (252)
T d2q46a1 47 GEADVFIGDITDAD------SINPAFQGIDALVILTSAVPKMKPGFDPTKGGRPEFIFEDGQYPEQVDWIGQKNQIDAAK 120 (252)
T ss_dssp CCTTEEECCTTSHH------HHHHHHTTCSEEEECCCCCCEECTTCCTTSCCCCCEECCTTCSHHHHTTHHHHHHHHHHH
T ss_pred CCcEEEEeeecccc------ccccccccceeeEEEEeeccccccccchhhhhhcccccccchhhhccccccceeeccccc
Confidence 67899999998654 5888999999999999865321 1122366889999999999998
Q ss_pred hcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 341 RCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 341 ~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
. .....+++.|+..++...... ... ....|...+.+.+.+...
T Consensus 121 ~-~~~~~~~~~s~~~~~~~~~~~-----------------------------~~~-----~~~~~~~~~~~~~~~~~~-- 163 (252)
T d2q46a1 121 V-AGVKHIVVVGSMGGTNPDHPL-----------------------------NKL-----GNGNILVWKRKAEQYLAD-- 163 (252)
T ss_dssp H-HTCSEEEEEEETTTTCTTCGG-----------------------------GGG-----GGCCHHHHHHHHHHHHHH--
T ss_pred c-ccccccccccccccCCCCccc-----------------------------ccc-----cccchhhhhhhhhhhhhc--
Confidence 7 477889999887766532100 000 123477777777766544
Q ss_pred cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCC
Q psy5825 421 YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHV 500 (596)
Q Consensus 421 ~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~ 500 (596)
.|++++|+||++|||+....... ..+.. ........+|||++|||++++.++.++..
T Consensus 164 ~~~~~~ilRp~~v~g~~~~~~~~---------------~~~~~---~~~~~~~~~~i~~~Dva~a~~~~l~~~~~----- 220 (252)
T d2q46a1 164 SGTPYTIIRAGGLLDKEGGVREL---------------LVGKD---DELLQTDTKTVPRADVAEVCIQALLFEEA----- 220 (252)
T ss_dssp SSSCEEEEEECEEECSCTTSSCE---------------EEEST---TGGGGSSCCEEEHHHHHHHHHHHTTCGGG-----
T ss_pred ccccceeecceEEECCCcchhhh---------------hhccC---cccccCCCCeEEHHHHHHHHHHHhCCccc-----
Confidence 69999999999999985422110 00000 00123346799999999999999876543
Q ss_pred CCCCCcCCCCCCCCCCeEEccCCC-CCcccHHHHHHHHHHH
Q psy5825 501 APPASLVAPIPRTDPPVYNLSISS-SYPITWLEYMNSVQAA 540 (596)
Q Consensus 501 ~~~~~~~~~~~~~~~~vyni~~~~-~~~vt~~el~~~l~~~ 540 (596)
.+++|||+++. ....++.+|.+++.+.
T Consensus 221 -------------~g~~~~i~~~~~~~~~~~~~~~~lf~~i 248 (252)
T d2q46a1 221 -------------KNKAFDLGSKPEGTSTPTKDFKALFSQV 248 (252)
T ss_dssp -------------TTEEEEEEECCTTTSCCCCCHHHHHTTC
T ss_pred -------------cCcEEEEeeCCCCCChhHHHHHHHHHHH
Confidence 47799998752 1345667777666544
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.49 E-value=1.9e-14 Score=137.15 Aligned_cols=184 Identities=13% Similarity=0.068 Sum_probs=115.8
Q ss_pred EEeCCCCcccHHHHHHHHhhhhhHHHhhhhh--hhhhcCcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh
Q psy5825 241 ILLRSKKNKTVQERLAEQFKDELFDRLKNEQ--ADILQRKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD 318 (596)
Q Consensus 241 ~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~--~~~~~~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~ 318 (596)
+|+-+.+|.-+..-+..++....+..+.... +.....++....+|+.+ .+..+...+|+||||+|.+...
T Consensus 5 IlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~~~~~~~~~~d~~~--------~~~~~~~~~d~vi~~~g~~~~~ 76 (212)
T d2a35a1 5 VLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAE--------LLPQLDGSIDTAFCCLGTTIKE 76 (212)
T ss_dssp EEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCCCTTEECCBSCHHH--------HGGGCCSCCSEEEECCCCCHHH
T ss_pred EEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhhcccccccccchhh--------hhhccccchheeeeeeeeeccc
Confidence 3666777777777777666543211100000 00000233333333321 1223344689999999876432
Q ss_pred -hhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhc
Q psy5825 319 -ELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLF 397 (596)
Q Consensus 319 -~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~ 397 (596)
.....+..+|+.++.+++++|.. .++++|||+||+++++.
T Consensus 77 ~~~~~~~~~~~~~~~~~~~~~a~~-~~v~~~i~~Ss~~~~~~-------------------------------------- 117 (212)
T d2a35a1 77 AGSEEAFRAVDFDLPLAVGKRALE-MGARHYLVVSALGADAK-------------------------------------- 117 (212)
T ss_dssp HSSHHHHHHHHTHHHHHHHHHHHH-TTCCEEEEECCTTCCTT--------------------------------------
T ss_pred cccccccccchhhhhhhccccccc-ccccccccccccccccc--------------------------------------
Confidence 34456889999999999999998 68999999999988753
Q ss_pred CCCCCchHHHHHHHHHHHHHHHhcCCC-EEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCcccc
Q psy5825 398 GGIYNNSYSFTKAIGESVVEKYLYKLP-LAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDL 476 (596)
Q Consensus 398 ~~~~~~~Y~~SK~~aE~lv~~~~~gl~-~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ 476 (596)
..+.|+.+|+.+|+++.+. +++ ++|+||++|||+......++ .+...+..+ ....+..
T Consensus 118 ---~~~~y~~~K~~~E~~l~~~--~~~~~~I~Rp~~v~G~~~~~~~~~-------------~~~~~~~~~---~~~~~~~ 176 (212)
T d2a35a1 118 ---SSIFYNRVKGELEQALQEQ--GWPQLTIARPSLLFGPREEFRLAE-------------ILAAPIARI---LPGKYHG 176 (212)
T ss_dssp ---CSSHHHHHHHHHHHHHTTS--CCSEEEEEECCSEESTTSCEEGGG-------------GTTCCCC-------CHHHH
T ss_pred ---cccchhHHHHHHhhhcccc--ccccceeeCCcceeCCcccccHHH-------------HHHHHHhhc---cCCCCcE
Confidence 2256999999999988654 564 89999999999864321110 001111111 1123456
Q ss_pred ccHHHHHHHHHHHHHh
Q psy5825 477 IPVDVATNMMLGVVWK 492 (596)
Q Consensus 477 ipVDdva~aii~~~~~ 492 (596)
|||+|+|++|+.++..
T Consensus 177 i~v~DvA~ai~~~~~~ 192 (212)
T d2a35a1 177 IEACDLARALWRLALE 192 (212)
T ss_dssp HHHHHHHHHHHHHHTC
T ss_pred EEHHHHHHHHHHHHcC
Confidence 9999999999998865
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=99.22 E-value=4.1e-11 Score=122.37 Aligned_cols=185 Identities=13% Similarity=0.025 Sum_probs=128.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhcCCCceEEEecCccc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRCSQLKAILHVSTLYT 356 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~~~vkrfV~vSS~~v 356 (596)
.+++++.||+.++. +.+..++.+++++|+...... ..|+.++.+++++|.. .++.++|+.||+..
T Consensus 49 ~~v~~~~gD~~d~~-----~~~~~a~~~~~~~~~~~~~~~---------~~~~~~~~~~~~aa~~-agv~~~v~~Ss~~~ 113 (350)
T d1xgka_ 49 PNVTLFQGPLLNNV-----PLMDTLFEGAHLAFINTTSQA---------GDEIAIGKDLADAAKR-AGTIQHYIYSSMPD 113 (350)
T ss_dssp TTEEEEESCCTTCH-----HHHHHHHTTCSEEEECCCSTT---------SCHHHHHHHHHHHHHH-HSCCSEEEEEECCC
T ss_pred CCCEEEEeeCCCcH-----HHHHHHhcCCceEEeeccccc---------chhhhhhhHHHHHHHH-hCCCceEEEeeccc
Confidence 57999999998742 347788899999998765432 2367788999999998 47888888888764
Q ss_pred ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHhcCCCEEEecCCccccC
Q psy5825 357 HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYLYKLPLAMVRPSIVVST 436 (596)
Q Consensus 357 ~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~~gl~~~IlRp~~V~G~ 436 (596)
...... . ....|..+|...|.++.. .+++++++|++..++.
T Consensus 114 ~~~~~~------------------------------------~-~~~~~~~~k~~~~~~~~~--~~~~~~~vr~~~~~~~ 154 (350)
T d1xgka_ 114 HSLYGP------------------------------------W-PAVPMWAPKFTVENYVRQ--LGLPSTFVYAGIYNNN 154 (350)
T ss_dssp GGGTSS------------------------------------C-CCCTTTHHHHHHHHHHHT--SSSCEEEEEECEEGGG
T ss_pred cccCCc------------------------------------c-cchhhhhhHHHHHHHHHh--hccCceeeeeceeecc
Confidence 432110 0 224588899999887765 4799999999998875
Q ss_pred CCCCccccCCCCCCcHHHHHHHHhccc-eEeecCCCCccccccH-HHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCC
Q psy5825 437 WKEPIVGWSNNLYGPGGAAAGAALGLI-HTFYAKHDKKCDLIPV-DVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTD 514 (596)
Q Consensus 437 ~~~p~~G~~~~~~~~~~l~~~~~~g~~-~~~~~~~~~~~d~ipV-Ddva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~ 514 (596)
...+..+. +. . . ....|.. ...+.+++..+.|+++ +|++.+++.++...... ..
T Consensus 155 ~~~~~~~~---~~-~-~---~~~~~~~~~~~~~~~~~~~~~i~~~~Dva~~v~~~l~~~~~~----------------~~ 210 (350)
T d1xgka_ 155 FTSLPYPL---FQ-M-E---LMPDGTFEWHAPFDPDIPLPWLDAEHDVGPALLQIFKDGPQK----------------WN 210 (350)
T ss_dssp CBSSSCSS---CB-E-E---ECTTSCEEEEESSCTTSCEEEECHHHHHHHHHHHHHHHCHHH----------------HT
T ss_pred cccccccc---cc-c-c---ccccccceeeecccCCCcceEEEeHHHHHHHHHHHHhCChhh----------------cC
Confidence 43221110 00 0 0 0111221 2344567788888876 89999998888653221 24
Q ss_pred CCeEEccCCCCCcccHHHHHHHHHHHcc
Q psy5825 515 PPVYNLSISSSYPITWLEYMNSVQAAGK 542 (596)
Q Consensus 515 ~~vyni~~~~~~~vt~~el~~~l~~~~~ 542 (596)
|.+|+++++ .+|+.|+++.|.++++
T Consensus 211 G~~~~~~g~---~~T~~eia~~l~~~~G 235 (350)
T d1xgka_ 211 GHRIALTFE---TLSPVQVCAAFSRALN 235 (350)
T ss_dssp TCEEEECSE---EECHHHHHHHHHHHHT
T ss_pred CeEEEEeCC---cCCHHHHHHHHHHHHC
Confidence 789999875 5899999999999998
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.77 E-value=2.6e-07 Score=89.49 Aligned_cols=177 Identities=10% Similarity=-0.024 Sum_probs=113.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|++||+|+..... ..+...+++|+.|+..+++++...
T Consensus 51 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~ 124 (254)
T d1hdca_ 51 DAARYQHLDVTIEE------DWQRVVAYAREEFGSVDGLVNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPA 124 (254)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEcccCCHH------HHHHHHHHHHHHcCCccEEEecCccccccccccccccccchhhhHHhhHHHHHHHHHHHH
Confidence 57899999999653 355544 3689999999975421 245668999999999999988531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+-.++|++||++.+.... ....|+.||+..+.+.+..
T Consensus 125 m~~~~~G~II~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~l 165 (254)
T d1hdca_ 125 MKDAGGGSIVNISSAAGLMGLA---------------------------------------LTSSYGASKWGVRGLSKLA 165 (254)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCCeecccccchhccccc---------------------------------------chhhHHHHHHHHHHHHHHH
Confidence 3457999999987643210 1246999999999988776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++..+-||.|..+ ++..........+.......+-.+-.+|||++++.++-...
T Consensus 166 A~e~a~~gIrVN~I~PG~v~T~-----------------~~~~~~~~~~~~~~~~~pl~R~g~~PedvA~~v~fL~S~~a 228 (254)
T d1hdca_ 166 AVELGTDRIRVNSVHPGMTYTP-----------------MTAETGIRQGEGNYPNTPMGRVGNEPGEIAGAVVKLLSDTS 228 (254)
T ss_dssp HHHHGGGTEEEEEEEECSBCCH-----------------HHHHHTCCCSTTSCTTSTTSSCB-CHHHHHHHHHHHHSGGG
T ss_pred HHHhCCCceEEEEeeeCcccCc-----------------cchhcCHHHHHHHHhCCCCCCCCCCHHHHHHHHHHHhchhh
Confidence 6 7899999999988432 11111100000000000000111345899999998885433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHH
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWL 531 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~ 531 (596)
.. -.|+++++.+|-....++.
T Consensus 229 ~~----------------itG~~i~vDGG~t~gp~~~ 249 (254)
T d1hdca_ 229 SY----------------VTGAELAVDGGWTTGPTVK 249 (254)
T ss_dssp TT----------------CCSCEEEESTTTTTSCCHH
T ss_pred CC----------------CCCceEEeCCCccCCCCcc
Confidence 21 3689999988733333443
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=98.73 E-value=3.7e-08 Score=95.63 Aligned_cols=171 Identities=12% Similarity=0.134 Sum_probs=111.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH---hccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHh-c-----CCCce
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI---QHHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATR-C-----SQLKA 347 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l---~~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~-~-----~~vkr 347 (596)
.++.++..|++.+.-.+ ...++.+ +..+|++||+|+... ...++..+++|+.|+.++..++.. + ....+
T Consensus 55 ~~~~~~~~d~~~~~~~~-~~~~~~~~~~~g~iDilvnnAG~~~-~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~ 132 (254)
T d1sbya1 55 VNITFHTYDVTVPVAES-KKLLKKIFDQLKTVDILINGAGILD-DHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGI 132 (254)
T ss_dssp SEEEEEECCTTSCHHHH-HHHHHHHHHHHSCCCEEEECCCCCC-TTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEE
T ss_pred CCEEEEEeecCCCHHHH-HHHHHHHHHHcCCCCEEEeCCCCCC-HHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCce
Confidence 57899999998532100 0112222 346899999999875 456788999999999999998865 1 12457
Q ss_pred EEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cC
Q psy5825 348 ILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YK 422 (596)
Q Consensus 348 fV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~g 422 (596)
+|++||.+.+.... ....|+.||+.-..+.+..+ .|
T Consensus 133 Ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~~t~~la~el~~~g 173 (254)
T d1sbya1 133 IANICSVTGFNAIH---------------------------------------QVPVYSASKAAVVSFTNSLAKLAPITG 173 (254)
T ss_dssp EEEECCGGGTSCCT---------------------------------------TSHHHHHHHHHHHHHHHHHHHHHHHHS
T ss_pred EEEEechhhccCCC---------------------------------------CCHHHHHHHHHHHHHHHHHHhhccccC
Confidence 99999987653210 12469999999988887765 78
Q ss_pred CCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCC
Q psy5825 423 LPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAP 502 (596)
Q Consensus 423 l~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~ 502 (596)
+.+..+-||.|..+.......|.+ ....+..... .....+.++||++++.++...
T Consensus 174 IrVn~I~PG~v~T~~~~~~~~~~~----~~~~~~~~~~------------~~~~~~~e~va~~~~~~~~~~--------- 228 (254)
T d1sbya1 174 VTAYSINPGITRTPLVHTFNSWLD----VEPRVAELLL------------SHPTQTSEQCGQNFVKAIEAN--------- 228 (254)
T ss_dssp EEEEEEEECSEESHHHHSCCCGGG----SCTTHHHHHT------------TSCCEEHHHHHHHHHHHHHHC---------
T ss_pred eEEEEEEeCCCcCccccccccchh----HHHHHHhccc------------cCCCCCHHHHHHHHHHhhhCC---------
Confidence 999999999996542110000000 0011111111 123457899999998877542
Q ss_pred CCCcCCCCCCCCCCeEEccCC
Q psy5825 503 PASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 503 ~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|.+|.+.+|
T Consensus 229 ----------~tG~vi~vdgG 239 (254)
T d1sbya1 229 ----------KNGAIWKLDLG 239 (254)
T ss_dssp ----------CTTCEEEEETT
T ss_pred ----------CCCCEEEECCC
Confidence 35889998887
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=98.73 E-value=7.5e-08 Score=93.51 Aligned_cols=148 Identities=16% Similarity=0.171 Sum_probs=102.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc------cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhcC
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH------HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRCS 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~------~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~~ 343 (596)
.++.++.+|++++. ++..+++ .+|.|||+|+..... ..+...+.+|+.|+.+|..++.. .
T Consensus 62 ~~v~~~~~Dv~d~~------~~~~~~~~i~~~~~i~~vv~~ag~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~~~~~~-~ 134 (259)
T d2fr1a1 62 ARTTVAACDVTDRE------SVRELLGGIGDDVPLSAVFHAAATLDDGTVDTLTGERIERASRAKVLGARNLHELTRE-L 134 (259)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHTSCTTSCEEEEEECCCCCCCCCGGGCCHHHHHHHTHHHHHHHHHHHHHHTT-S
T ss_pred ccccccccccchHH------HHHHhhccccccccccccccccccccccccccccHHHHHHHhhhhccchhHHHHHhhc-c
Confidence 57999999999654 4666654 378999999976422 23455788999999999998877 4
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-cC
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-YK 422 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-~g 422 (596)
...+||++||++...... ....|+.+|..-+.+..... .|
T Consensus 135 ~~~~iv~~SS~a~~~g~~---------------------------------------~~~~YaAaka~l~~la~~~~~~G 175 (259)
T d2fr1a1 135 DLTAFVLFSSFASAFGAP---------------------------------------GLGGYAPGNAYLDGLAQQRRSDG 175 (259)
T ss_dssp CCSEEEEEEEHHHHTCCT---------------------------------------TCTTTHHHHHHHHHHHHHHHHTT
T ss_pred CCceEeeecchhhccCCc---------------------------------------ccHHHHHHHHhHHHHHHHHHhCC
Confidence 678999999987643210 11359999999999988877 99
Q ss_pred CCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 423 LPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 423 l~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
++++.+.||.|.+. |.... .+.. .+ ....+..++.++++++|..++..
T Consensus 176 i~v~~I~pg~~~~~------g~~~~------~~~~----~~------~~~G~~~~~~~~~~~~l~~~l~~ 223 (259)
T d2fr1a1 176 LPATAVAWGTWAGS------GMAEG------PVAD----RF------RRHGVIEMPPETACRALQNALDR 223 (259)
T ss_dssp CCCEEEEECCBC----------------------------C------TTTTEECBCHHHHHHHHHHHHHT
T ss_pred CCEEECCCCcccCC------ccccc------hHHH----HH------HhcCCCCCCHHHHHHHHHHHHhC
Confidence 99999999988653 21111 0001 00 01123457889999998887754
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.70 E-value=4.9e-07 Score=86.97 Aligned_cols=163 Identities=12% Similarity=0.121 Sum_probs=112.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+||+++. ++..++ ..+|++||+|+.... ...+...+++|+.|+.++++.+..
T Consensus 52 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~idilinnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 125 (244)
T d1nffa_ 52 DAARYVHLDVTQPA------QWKAAVDTAVTAFGGLHVLVNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKP 125 (244)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcceEEEeecCCHH------HHHHHHHHHHHHhCCCeEEEECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhH
Confidence 57889999999754 344443 358999999997642 134567899999999999987643
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
+ .+-.++|++||.+.+.... ....|+.||+..+.+.+..
T Consensus 126 m~~~~~G~Ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk~l 166 (244)
T d1nffa_ 126 MKEAGRGSIINISSIEGLAGTV---------------------------------------ACHGYTATKFAVRGLTKST 166 (244)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHH
T ss_pred HHhcCcceEEeccccccccccc---------------------------------------cccchhhHHHHHHHHHHHH
Confidence 1 2346899999987653210 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+..+-||.|-.+... |... .+...| .--+...+|+|++++.++-...
T Consensus 167 A~el~~~gIrVN~I~PG~i~T~~~~----~~~~--------------~~~~~p-----l~R~~~p~diA~~v~fL~s~~s 223 (244)
T d1nffa_ 167 ALELGPSGIRVNSIHPGLVKTPMTD----WVPE--------------DIFQTA-----LGRAAEPVEVSNLVVYLASDES 223 (244)
T ss_dssp HHHHGGGTEEEEEEEECCBCSGGGT----TSCT--------------TCSCCS-----SSSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhcccCEEEEEEeeCCccChhHh----hhhH--------------HHHhcc-----ccCCCCHHHHHHHHHHHhChhh
Confidence 6 7899999999988554221 1110 011111 1125678999999998885433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++.+.+|
T Consensus 224 ~~----------------itG~~i~vDGG 236 (244)
T d1nffa_ 224 SY----------------STGAEFVVDGG 236 (244)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------CcCCEEEECCC
Confidence 21 36889999877
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=98.67 E-value=3.8e-07 Score=88.33 Aligned_cols=113 Identities=14% Similarity=0.109 Sum_probs=83.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++ ..+|++||+||.... ...++..+++|+.|+.++++++..
T Consensus 50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 123 (255)
T d1gega_ 50 GHAVAVKVDVSDRD------QVFAAVEQARKTLGGFDVIVNNAGVAPSTPIESITPEIVDKVYNINVKGVIWGIQAAVEA 123 (255)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHTTCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHHhCCccEEEecccccccCcHHHhhhhhhhhhhhhcccchhhhhhhhcch
Confidence 57899999999654 344443 368999999997532 133566899999999999888653
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
......+|++||.+.+.... ....|+.||+.-+.+.+.
T Consensus 124 m~~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk~ 164 (255)
T d1gega_ 124 FKKEGHGGKIINACSQAGHVGNP---------------------------------------ELAVYSSSKFAVRGLTQT 164 (255)
T ss_dssp HHHHTSCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred hhhhccccccccccchhhcccCc---------------------------------------ccccchhCHHHHHhhHHH
Confidence 23456799999987543210 224699999999998877
Q ss_pred Hh-----cCCCEEEecCCccc
Q psy5825 419 YL-----YKLPLAMVRPSIVV 434 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~ 434 (596)
.+ .|+++..+-||.|-
T Consensus 165 lA~el~~~gIrVN~I~PG~i~ 185 (255)
T d1gega_ 165 AARDLAPLGITVNGYCPGIVK 185 (255)
T ss_dssp HHHHHGGGTEEEEEEEECSBS
T ss_pred HHHHhhhhCcEEEEEecCccc
Confidence 65 78999999999883
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.66 E-value=6.3e-08 Score=92.98 Aligned_cols=168 Identities=11% Similarity=0.057 Sum_probs=109.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
..+..+.+|++++. +++.++ ..+|++||+||.... ...+...+++|+.|+..+++++..
T Consensus 45 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~ 118 (237)
T d1uzma1 45 KGLFGVEVDVTDSD------AVDRAFTAVEEHQGPVEVLVSNAGLSADAFLMRMTEEKFEKVINANLTGAFRVAQRASRS 118 (237)
T ss_dssp TTSEEEECCTTCHH------HHHHHHHHHHHHHSSCSEEEEECSCCC-----CCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred cCceEEEEecCCHH------HHHHHHHHHHHhcCCceEEEeeecccccccHhhCCHHHHHHHHHhhhhhhhhhhhhhhhc
Confidence 56788999999754 344443 358999999997532 134566899999999988887653
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+..++|++||++...... ....|+.||+.-+.+.+..
T Consensus 119 m~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~l 159 (237)
T d1uzma1 119 MQRNKFGRMIFIGSVSGLWGIG---------------------------------------NQANYAASKAGVIGMARSI 159 (237)
T ss_dssp HHHTTCEEEEEECCCCC--------------------------------------------CCHHHHHHHHHHHHHHHHH
T ss_pred ccccCCCceEEEcchhhccCCc---------------------------------------ccHHHHHHHHHHHHHHHHH
Confidence 14556999999987643210 2246999999999888775
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+..+.||.|..+... .+ .... ..... ..+|. --+.-.+|+|++++.++-...
T Consensus 160 A~e~~~~gIrVN~I~PG~v~T~~~~-------~~--~~~~-~~~~~---~~~pl-----~R~~~pedvA~~v~fL~S~~s 221 (237)
T d1uzma1 160 ARELSKANVTANVVAPGYIDTDMTR-------AL--DERI-QQGAL---QFIPA-----KRVGTPAEVAGVVSFLASEDA 221 (237)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHHH-------HS--CHHH-HHHHG---GGCTT-----CSCBCHHHHHHHHHHHHSGGG
T ss_pred HhhhhcCCceeeeeeeCcCCChhhh-------cc--CHHH-HHHHH---hcCCC-----CCCcCHHHHHHHHHHHhCchh
Confidence 5 7899999999998543210 00 0111 11111 11221 124567899999998885433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. -.|+++++.+|
T Consensus 222 ~~----------------itG~~i~vdGG 234 (237)
T d1uzma1 222 SY----------------ISGAVIPVDGG 234 (237)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------CcCCeEEECCC
Confidence 21 36889998876
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.65 E-value=9.7e-07 Score=86.02 Aligned_cols=174 Identities=13% Similarity=0.125 Sum_probs=114.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----h----hhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----D----ELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----~----~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++. ++..++ ..+|++||+||.... . ..+...+++|+.|+..+++++.
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~ 127 (268)
T d2bgka1 54 DVISFVHCDVTKDE------DVRNLVDTTIAKHGKLDIMFGNVGVLSTTPYSILEAGNEDFKRVMDINVYGAFLVAKHAA 127 (268)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCSSCSSTTTCCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHcCCcceeccccccccCCCcccccCcHHHHHHHHHHhhcchhhhhhhhc
Confidence 56888999999654 355544 368999999996431 1 2356688999999999998876
Q ss_pred h-c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 341 R-C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 341 ~-~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
. + .+-.++|++||++.+.... . ....|+.||+.-+.+.+
T Consensus 128 ~~m~~~~~g~ii~iss~~~~~~~~-------------------------------------~-~~~~Y~asKaal~~lt~ 169 (268)
T d2bgka1 128 RVMIPAKKGSIVFTASISSFTAGE-------------------------------------G-VSHVYTATKHAVLGLTT 169 (268)
T ss_dssp HHHGGGTCEEEEEECCGGGTCCCT-------------------------------------T-SCHHHHHHHHHHHHHHH
T ss_pred chHhhcCCCCcccccccccccccc-------------------------------------c-cccccchhHHHHHhCHH
Confidence 4 1 3456899999887543210 0 22469999999999988
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+ .|+++..+-||.|-.+..... +............... .+ .--+...+|+|++++.++-.
T Consensus 170 ~lA~el~~~gIrVN~I~PG~i~T~~~~~~------~~~~~~~~~~~~~~~~--~~-----~gr~~~pedvA~~v~fL~S~ 236 (268)
T d2bgka1 170 SLCTELGEYGIRVNCVSPYIVASPLLTDV------FGVDSSRVEELAHQAA--NL-----KGTLLRAEDVADAVAYLAGD 236 (268)
T ss_dssp HHHHHHGGGTEEEEEEEESCCSCCCCTTS------SSCCHHHHHHHHHHTC--SS-----CSCCCCHHHHHHHHHHHHSG
T ss_pred HHHHHhChhCeEEEecCCCCccChHHhhh------hcCCHHHHHHHHHhcc--cc-----CCCCcCHHHHHHHHHHHhCh
Confidence 765 789999999999966543211 1111122222111111 01 11256689999999998854
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... -.|+++++.+|
T Consensus 237 ~s~~----------------itGq~i~VDGG 251 (268)
T d2bgka1 237 ESKY----------------VSGLNLVIDGG 251 (268)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred hhCC----------------ccCceEEECcC
Confidence 3321 46899999887
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=98.65 E-value=2.7e-07 Score=89.40 Aligned_cols=169 Identities=14% Similarity=0.105 Sum_probs=112.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC---hh---hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR---FD---ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~---~~---~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
.++.++.+|++++. ++..++ ..+|++||+||... +. ..++..+++|+.|+..+++.+...
T Consensus 60 ~~~~~~~~Dvs~~~------~~~~~~~~~~~~~g~iDilvnnAG~~~~~~~e~~~e~~~~~~~vNl~~~~~~~~~~~~~m 133 (255)
T d1fmca_ 60 GQAFACRCDITSEQ------ELSALADFAISKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEM 133 (255)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEeeeCCcCCCCCcccCCHHHHHHHHHHHHHHhhhhHHHHHhhh
Confidence 57899999999754 344443 46899999999753 21 345668899999999999877541
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+-.++|++||++...... ....|+.||+.-+.+.+..+
T Consensus 134 ~~~~~g~Ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~lA 174 (255)
T d1fmca_ 134 EKNGGGVILTITSMAAENKNI---------------------------------------NMTSYASSKAAASHLVRNMA 174 (255)
T ss_dssp HHHTCEEEEEECCGGGTCCCT---------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhcccc---------------------------------------ccccchhHHHHHHHHHHHHH
Confidence 2345899999987643210 22469999999999887765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
+|+.+..+-||.|-.+.. .. .. .......+.. . .|. --+...+|+|++++.++-....
T Consensus 175 ~el~~~gIrVN~I~PG~i~T~~~------~~-~~-~~e~~~~~~~-~---~pl-----~R~g~pedvA~~v~fL~S~~s~ 237 (255)
T d1fmca_ 175 FDLGEKNIRVNGIAPGAILTDAL------KS-VI-TPEIEQKMLQ-H---TPI-----RRLGQPQDIANAALFLCSPAAS 237 (255)
T ss_dssp HHHHTTTEEEEEEEECSBCSHHH------HT-TC-CHHHHHHHHH-T---CSS-----CSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHhCccCeEEEEeeeCcCcChHh------hc-cC-CHHHHHHHHh-c---CCC-----CCCcCHHHHHHHHHHHhCchhc
Confidence 789999999999854321 11 11 1122222222 1 121 1245678999999998854322
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. -.|+++.+.+|
T Consensus 238 ~----------------itG~~i~vDGG 249 (255)
T d1fmca_ 238 W----------------VSGQILTVSGG 249 (255)
T ss_dssp T----------------CCSCEEEESTT
T ss_pred C----------------CcCCEEEECcC
Confidence 1 36899999888
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.65 E-value=8.3e-07 Score=85.67 Aligned_cols=168 Identities=11% Similarity=0.107 Sum_probs=112.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|++||+|+..... ..+...+.+|+.|+..+++++...
T Consensus 59 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 132 (251)
T d2c07a1 59 YESSGYAGDVSKKE------EISEVINKILTEHKNVDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKR 132 (251)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHCSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHhcCCceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcc
Confidence 57899999999654 355544 3689999999975421 345678999999999999887531
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+-.++|++||++...... ....|+.||+.-+.+.+..
T Consensus 133 m~~~~~G~IVnisS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltr~l 173 (251)
T d2c07a1 133 MINNRYGRIINISSIVGLTGNV---------------------------------------GQANYSSSKAGVIGFTKSL 173 (251)
T ss_dssp HHHHTCEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred cccCCCeEEEEECCHHhcCCCC---------------------------------------CCHHHHHHHHHHHHHHHHH
Confidence 3457999999987643110 1246999999999999876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+++..+.||.|-.+.. +.+ +..+...+.. . +|. --+...+|+|++++.++-...
T Consensus 174 A~el~~~gIrVN~V~PG~v~T~~~-------~~~--~~~~~~~~~~-~---~pl-----~R~~~pedvA~~v~fL~S~~s 235 (251)
T d2c07a1 174 AKELASRNITVNAIAPGFISSDMT-------DKI--SEQIKKNIIS-N---IPA-----GRMGTPEEVANLACFLSSDKS 235 (251)
T ss_dssp HHHHGGGTEEEEEEEECSBCC------------C--CHHHHHHHHT-T---CTT-----SSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhhhhCeEEEEEccCCEecccc-------ccc--CHHHHHHHHh-c---CCC-----CCCcCHHHHHHHHHHHhCchh
Confidence 5 789999999999955422 111 1222222221 1 121 125667899999988885433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.+|
T Consensus 236 ~~----------------itG~~i~vDGG 248 (251)
T d2c07a1 236 GY----------------INGRVFVIDGG 248 (251)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------CcCcEEEECCC
Confidence 21 36889998876
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=98.64 E-value=8.1e-07 Score=86.27 Aligned_cols=170 Identities=9% Similarity=-0.006 Sum_probs=111.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++ ..+|++||+|+..... ..+...+++|+.|+..+++++..
T Consensus 57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 130 (261)
T d1geea_ 57 GEAIAVKGDVTVES------DVINLVQSAIKEFGKLDVMINNAGLENPVSSHEMSLSDWNKVIDTNLTGAFLGSREAIKY 130 (261)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCEeeccceecCCcchhhcCHHHHHHHHHHhcccchhHHHHHhhh
Confidence 57889999999654 344444 3689999999976421 23566899999999999888754
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
+ .....+|++||++...... ....|+.||+..+.+.+.
T Consensus 131 m~~~~~g~~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~ 171 (261)
T d1geea_ 131 FVENDIKGTVINMSSVHEKIPWP---------------------------------------LFVHYAASKGGMKLMTET 171 (261)
T ss_dssp HHHTTCCCEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred hccccccccccccccchhcccCc---------------------------------------cccccccCCccchhhHHH
Confidence 1 2334588999987543210 124699999999998877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.+ .|+.+..+-||.|..+... . .......... .... +|. --+...+|+|++++.++-..
T Consensus 172 lA~e~~~~gIrVN~I~PG~v~T~~~~------~-~~~~~~~~~~-~~~~---~pl-----~R~~~pediA~~v~fL~S~~ 235 (261)
T d1geea_ 172 LALEYAPKGIRVNNIGPGAINTPINA------E-KFADPEQRAD-VESM---IPM-----GYIGEPEEIAAVAAWLASSE 235 (261)
T ss_dssp HHHHHGGGTCEEEEEEECSBCSGGGH------H-HHHSHHHHHH-HHTT---CTT-----SSCBCHHHHHHHHHHHHSGG
T ss_pred HHHHhhhhCcEEEEEeeCcCcCHhHh------h-hcCCHHHHHH-HHhc---CCC-----CCCCCHHHHHHHHHHHhCch
Confidence 65 7899999999998543210 0 0000011111 1111 111 12456799999999888543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... -.|+++.+.+|
T Consensus 236 s~~----------------itG~~i~vDGG 249 (261)
T d1geea_ 236 ASY----------------VTGITLFADGG 249 (261)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hcC----------------CcCCeEEECCC
Confidence 321 36899999887
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.64 E-value=2.7e-07 Score=89.27 Aligned_cols=169 Identities=9% Similarity=0.044 Sum_probs=109.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++ ..+|++||+|+..... ..+...+++|+.|+..+++++..
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vnl~g~~~~~~~~~~~ 127 (251)
T d1zk4a1 54 DQIQFFQHDSSDED------GWTKLFDATEKAFGPVSTLVNNAGIAVNKSVEETTTAEWRKLLAVNLDGVFFGTRLGIQR 127 (251)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCceEEEeccccccccchhcccccchhhhccccccccchhHHHHHHH
Confidence 57899999999754 344443 3589999999975321 23556889999999999998764
Q ss_pred c--CC-CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C--SQ-LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~--~~-vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
+ .+ ..++|++||++.+.... ....|+.||+....+.+.
T Consensus 128 m~~~~~gg~Ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~ 168 (251)
T d1zk4a1 128 MKNKGLGASIINMSSIEGFVGDP---------------------------------------SLGAYNASKGAVRIMSKS 168 (251)
T ss_dssp HTTSSSCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCceEeeeccceeccCC---------------------------------------CchhHHHHHHHHhcchHH
Confidence 1 22 24789999987542110 124699999999887765
Q ss_pred Hh-------cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 419 YL-------YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 419 ~~-------~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
.+ +|+.+..+-||.|-.+.. ...... ..... ....+|. --+...+|+|++++.++-
T Consensus 169 lA~e~~l~~~gIrVN~I~PG~i~T~~~-------~~~~~~-~~~~~----~~~~~pl-----~R~~~pedvA~~v~fL~S 231 (251)
T d1zk4a1 169 AALDCALKDYDVRVNTVHPGYIKTPLV-------DDLPGA-EEAMS----QRTKTPM-----GHIGEPNDIAYICVYLAS 231 (251)
T ss_dssp HHHHHHHTTCSEEEEEEEECCBCCHHH-------HTSTTH-HHHHT----STTTCTT-----SSCBCHHHHHHHHHHHHS
T ss_pred HHHHHhcCCCcEEEEEEeCCCCCChhH-------HhcCCH-HHHHH----HHhCCCC-----CCCcCHHHHHHHHHHHhC
Confidence 32 579999999998854321 111111 11110 1101111 125668999999998875
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|+++++.+|
T Consensus 232 ~~s~~----------------itG~~i~vDGG 247 (251)
T d1zk4a1 232 NESKF----------------ATGSEFVVDGG 247 (251)
T ss_dssp GGGTT----------------CCSCEEEESTT
T ss_pred chhCC----------------CcCcEEEECcc
Confidence 43321 36889999877
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=98.64 E-value=6.1e-07 Score=87.07 Aligned_cols=115 Identities=14% Similarity=0.083 Sum_probs=85.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|++||+||.... ...+...+++|+.|+.++++.+...
T Consensus 55 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 128 (260)
T d1x1ta1 55 VKVLYDGADLSKGE------AVRGLVDNAVRQMGRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPH 128 (260)
T ss_dssp SCEEEECCCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEECCCCCHH------HHHHHHHHHHHHhCCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhh
Confidence 57899999999754 355444 358999999997532 1345678999999999998887541
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+-.++|++||.+...... ....|+.||+.-+.+.+..
T Consensus 129 m~~~~~G~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~l 169 (260)
T d1x1ta1 129 MKKQGFGRIINIASAHGLVASA---------------------------------------NKSAYVAAKHGVVGFTKVT 169 (260)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HhhcCCceEeecccccceeccC---------------------------------------CcchhhhhhhhHHHhHHHH
Confidence 2446899999987643210 2246999999999988776
Q ss_pred h-----cCCCEEEecCCccccC
Q psy5825 420 L-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~ 436 (596)
+ .|+.+..+.||.|-.+
T Consensus 170 A~el~~~gIrVN~I~PG~i~T~ 191 (260)
T d1x1ta1 170 ALETAGQGITANAICPGWVRTP 191 (260)
T ss_dssp HHHHTTTTEEEEEEEECCBCC-
T ss_pred HHHhchhCcEEEEEecCCCCCh
Confidence 5 7899999999998544
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=98.64 E-value=6e-07 Score=86.49 Aligned_cols=170 Identities=14% Similarity=0.079 Sum_probs=108.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|++||+||..... ..+...+++|+.|+..+++++...
T Consensus 52 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~ 125 (247)
T d2ew8a1 52 RRVLTVKCDVSQPG------DVEAFGKQVISTFGRCDILVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPG 125 (247)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhH
Confidence 67899999999654 354443 4689999999975421 345678999999999999987541
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+-.++|++||.+...... ....|+.||+.-..+.+..
T Consensus 126 m~~~~~G~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk~l 166 (247)
T d2ew8a1 126 MKRNGWGRIINLTSTTYWLKIE---------------------------------------AYTHYISTKAANIGFTRAL 166 (247)
T ss_dssp HHHHTCEEEEEECCGGGGSCCS---------------------------------------SCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCCccccccchhcccCc---------------------------------------ccccchhhhccHHHHHHHH
Confidence 2456899999987643210 2246999999999888776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+..+-||.|-.+..... . ..... ....... ...--+.-.+|+|++++.++-...
T Consensus 167 A~ela~~gIrVN~I~PG~i~T~~~~~~-------~-~~~~~-~~~~~~~-------~~l~r~~~pedvA~~v~fL~S~~s 230 (247)
T d2ew8a1 167 ASDLGKDGITVNAIAPSLVRTATTEAS-------A-LSAMF-DVLPNML-------QAIPRLQVPLDLTGAAAFLASDDA 230 (247)
T ss_dssp HHHHGGGTEEEEEEEECCC---------------------------CTT-------SSSCSCCCTHHHHHHHHHHTSGGG
T ss_pred HHHhcccCeEEEEEeeCCCCCcccccc-------c-cchhH-HHHHHHh-------ccCCCCCCHHHHHHHHHHHhCchh
Confidence 5 789999999999855422110 0 00000 0000000 001124456899999988875433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.+|
T Consensus 231 ~~----------------itG~~i~vDGG 243 (247)
T d2ew8a1 231 SF----------------ITGQTLAVDGG 243 (247)
T ss_dssp TT----------------CCSCEEEESSS
T ss_pred cC----------------CcCCeEEECCC
Confidence 21 36889998877
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=98.62 E-value=1.1e-06 Score=84.35 Aligned_cols=169 Identities=13% Similarity=0.107 Sum_probs=112.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|++||+|+..... ..++..+++|+.|+.++++++...
T Consensus 51 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDiLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 124 (244)
T d1edoa_ 51 GQAITFGGDVSKEA------DVEAMMKTAIDAWGTIDVVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKI 124 (244)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHSSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEeCCCCCHH------HHHHHHHHHHHHcCCCCccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHH
Confidence 67889999999654 354443 3589999999975421 345668999999999998888641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+-.++|++||++.+.... ....|+.||..-+.+.+..
T Consensus 125 m~~~~~G~IVnisS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk~l 165 (244)
T d1edoa_ 125 MMKKRKGRIINIASVVGLIGNI---------------------------------------GQANYAAAKAGVIGFSKTA 165 (244)
T ss_dssp HHHHTCEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCcEEEEEcChhhcCCCC---------------------------------------CCHHHHHHHHHHHHChHHH
Confidence 3456999999987642110 1246999999999998876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+..+-||.|-.+.. ..+ ...+...+. .. +|. --+...+|+|++++.++....
T Consensus 166 A~el~~~gIrvN~I~PG~i~T~~~-------~~~--~~~~~~~~~-~~---~pl-----~R~~~p~dvA~~v~fLa~S~~ 227 (244)
T d1edoa_ 166 AREGASRNINVNVVCPGFIASDMT-------AKL--GEDMEKKIL-GT---IPL-----GRTGQPENVAGLVEFLALSPA 227 (244)
T ss_dssp HHHHHTTTEEEEEEEECSBCSHHH-------HTT--CHHHHHHHH-TS---CTT-----CSCBCHHHHHHHHHHHHHCSG
T ss_pred HHHHhhhCcEEEEEecceeccHHH-------HHh--hHHHHHHHH-hc---CCC-----CCCcCHHHHHHHHHHHHCCch
Confidence 6 789999999998843211 111 112211111 11 111 125567999999998864332
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|+++.+.+|
T Consensus 228 a~~---------------itG~~i~vdGG 241 (244)
T d1edoa_ 228 ASY---------------ITGQAFTIDGG 241 (244)
T ss_dssp GGG---------------CCSCEEEESTT
T ss_pred hcC---------------CcCCeEEeCCC
Confidence 211 36889998877
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.61 E-value=3.4e-07 Score=88.08 Aligned_cols=168 Identities=13% Similarity=0.095 Sum_probs=112.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|++||+|+..... ..+...+++|+.|+..++++|...
T Consensus 50 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 123 (243)
T d1q7ba_ 50 ANGKGLMLNVTDPA------SIESVLEKIRAEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRA 123 (243)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCCcEEEEEecCHH------HhhhhhhhhhcccCCcceehhhhhhccccccccccccccccccceeechhhhhHHHHHHH
Confidence 56788999999653 344443 3589999999875421 345668899999999999988641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+-.++|++||.+...... ....|+.||+..+.+.+..
T Consensus 124 m~~~~~G~II~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~l 164 (243)
T d1q7ba_ 124 MMKKRHGRIITIGSVVGTMGNG---------------------------------------GQANYAAAKAGLIGFSKSL 164 (243)
T ss_dssp HHHHTCEEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHcCCCEeeeecchhhcCCCC---------------------------------------CCHHHHHHHHHHHHHHHHH
Confidence 2446899999987543210 1246999999999998776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ +|+.+..+.||.|-.+.. ..+ .......+.. . +|. --+...+|+|++++.++-...
T Consensus 165 A~ela~~gIrVN~I~PG~i~T~~~-------~~~--~~~~~~~~~~-~---~pl-----~R~~~pedvA~~v~fL~S~~s 226 (243)
T d1q7ba_ 165 AREVASRGITVNVVAPGFIETDMT-------RAL--SDDQRAGILA-Q---VPA-----GRLGGAQEIANAVAFLASDEA 226 (243)
T ss_dssp HHHHGGGTEEEEEEEECSBCCHHH-------HTS--CHHHHHHHHT-T---CTT-----SSCBCHHHHHHHHHHHHSGGG
T ss_pred HHHhCccCeEEEEEecceEechhh-------hhh--hhhHHHHHHh-c---CCC-----CCCCCHHHHHHHHHHHhCchh
Confidence 5 789999999998843211 011 1111111111 1 111 125678999999998885433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++++.+|
T Consensus 227 ~~----------------itGq~i~vdGG 239 (243)
T d1q7ba_ 227 AY----------------ITGETLHVNGG 239 (243)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------CcCCeEEECCC
Confidence 21 36889999877
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=98.58 E-value=1.2e-06 Score=84.80 Aligned_cols=176 Identities=10% Similarity=0.021 Sum_probs=111.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC----hh----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR----FD----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~----~~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..++ ..+|++||+||... +. ..++..+++|+.|+.++++++..
T Consensus 55 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 128 (258)
T d1iy8a_ 55 AEVLTTVADVSDEA------QVEAYVTATTERFGRIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLK 128 (258)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CeEEEEeccCCCHH------HHHHHHHHHHHHhCCCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHh
Confidence 57899999999754 344443 46899999999642 21 23556899999999999988753
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+-.++|++||.+...... ....|+.||+....+.+.
T Consensus 129 ~m~~~~~G~Ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~ 169 (258)
T d1iy8a_ 129 IMREQGSGMVVNTASVGGIRGIG---------------------------------------NQSGYAAAKHGVVGLTRN 169 (258)
T ss_dssp HHHHHTCCEEEEECCGGGTSBCS---------------------------------------SBHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCcccccHhhccCCC---------------------------------------CchHHHHHHHHHHHHHHH
Confidence 1 3456899999987643210 124699999999988877
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.+ .|+.+..+-||.|..+........... ..+..+...+.. .+| .--+...+|+|++++.++-..
T Consensus 170 lA~el~~~gIrVN~i~PG~v~T~~~~~~~~~~~~-~~~~~~~~~~~~----~~p-----l~R~~~p~dvA~~v~fL~S~~ 239 (258)
T d1iy8a_ 170 SAVEYGRYGIRINAIAPGAIWTPMVENSMKQLDP-ENPRKAAEEFIQ----VNP-----SKRYGEAPEIAAVVAFLLSDD 239 (258)
T ss_dssp HHHHHGGGTCEEEEEEECSBCSHHHHHHHHHHCT-TCHHHHHHHHHT----TCT-----TCSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHhCccCceEEEEeeCcccCHHHHHHHhhcCc-ccHHHHHHHHHh----cCC-----CCCCcCHHHHHHHHHHHhCch
Confidence 65 789999999999854311000000000 000111111111 111 112456789999999888543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... -.|+++++.+|
T Consensus 240 s~~----------------itG~~i~VDGG 253 (258)
T d1iy8a_ 240 ASY----------------VNATVVPIDGG 253 (258)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hcC----------------CcCceEEcCcc
Confidence 321 36889999887
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.58 E-value=4.8e-07 Score=87.25 Aligned_cols=172 Identities=13% Similarity=0.060 Sum_probs=108.5
Q ss_pred EEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc--
Q psy5825 279 VHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC-- 342 (596)
Q Consensus 279 v~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~-- 342 (596)
..++.+|++++. +++.++ ..+|++||+||..... ..++..+++|+.|+.++++++...
T Consensus 50 ~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~ 123 (248)
T d2d1ya1 50 GAFFQVDLEDER------ERVRFVEEAAYALGRVDVLVNNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMR 123 (248)
T ss_dssp CEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CeEEEEeCCCHH------HHHHHHHHHHHhcCCCCeEEEeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccc
Confidence 457889999653 344443 3689999999975321 245668999999999999998641
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+-.++|++||.+.+.... ....|+.||+..+.+.+..+
T Consensus 124 ~~~~G~Ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk~lA~ 164 (248)
T d2d1ya1 124 KVGGGAIVNVASVQGLFAEQ---------------------------------------ENAAYNASKGGLVNLTRSLAL 164 (248)
T ss_dssp TTTCEEEEEECCGGGTSBCT---------------------------------------TBHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccc---------------------------------------ccchhHHHHHHHHHHHHHHHH
Confidence 3456999999987653210 22469999999999887765
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
+|+.+..+-||.|-.+..... +... ..+..+...+.. . .| .--+...+|+|++++.++-.....
T Consensus 165 el~~~gIrVN~I~PG~v~T~~~~~~--~~~~-~~~~~~~~~~~~-~---~p-----l~R~~~pedia~~v~fL~S~~s~~ 232 (248)
T d2d1ya1 165 DLAPLRIRVNAVAPGAIATEAVLEA--IALS-PDPERTRRDWED-L---HA-----LRRLGKPEEVAEAVLFLASEKASF 232 (248)
T ss_dssp HHGGGTEEEEEEEECSBCCHHHHHH--HC---------CHHHHT-T---ST-----TSSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HhhhhCcEEEEEeeCCCCCchHHHH--hhcC-CCHHHHHHHHHh-c---CC-----CCCCcCHHHHHHHHHHHhCchhcC
Confidence 789999999998843210000 0000 000000000000 0 01 112456799999999887543321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
-.|+++++.+|
T Consensus 233 ----------------itG~~i~vDGG 243 (248)
T d2d1ya1 233 ----------------ITGAILPVDGG 243 (248)
T ss_dssp ----------------CCSCEEEESTT
T ss_pred ----------------CCCcEEEcCcC
Confidence 46899999887
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.57 E-value=7.6e-07 Score=86.37 Aligned_cols=115 Identities=17% Similarity=0.178 Sum_probs=78.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..++ ..+|++||+||..... ..++..+++|+.|+..+++++..
T Consensus 57 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~ 130 (259)
T d1xq1a_ 57 FQVTGSVCDASLRP------EREKLMQTVSSMFGGKLDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHP 130 (259)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHTTCCSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEeccCCCHH------HHHHHHHHHHHHhCCCcccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhh
Confidence 57899999999654 233332 2489999999975421 34567899999999999988754
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+-.++|++||++...... ....|+.||+..+.+.+.
T Consensus 131 ~m~~~~~G~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~ 171 (259)
T d1xq1a_ 131 LLKASGCGNIIFMSSIAGVVSAS---------------------------------------VGSIYSATKGALNQLARN 171 (259)
T ss_dssp HHHHHSSCEEEEEC-------------------------------------------------CCHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccc---------------------------------------ccccccccccchhhhhHH
Confidence 1 2456899999977542100 224699999999988877
Q ss_pred Hh-----cCCCEEEecCCccccC
Q psy5825 419 YL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~ 436 (596)
.+ .|+.+..+-||.|-.+
T Consensus 172 lA~e~~~~gIrVN~V~PG~i~T~ 194 (259)
T d1xq1a_ 172 LACEWASDGIRANAVAPAVIATP 194 (259)
T ss_dssp HHHHHGGGTCEEEEEECCSCC--
T ss_pred HHHHhcccCeEEEEeccCcccCH
Confidence 65 7899999999998543
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.57 E-value=9.9e-07 Score=84.75 Aligned_cols=170 Identities=14% Similarity=0.148 Sum_probs=113.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-c---
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR-C--- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~-~--- 342 (596)
..+.++.+|++++. .++.+++ .+|++||+|+...+. ..+...+++|+.|+..+.+++.. +
T Consensus 52 ~~~~~~~~Dv~d~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~ 125 (244)
T d1pr9a_ 52 PGIEPVCVDLGDWE------ATERALGSVGPVDLLVNNAAVALLQPFLEVTKEAFDRSFEVNLRAVIQVSQIVARGLIAR 125 (244)
T ss_dssp TTCEEEECCTTCHH------HHHHHHTTCCCCCEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCHH------HHHHHHHHhCCceEEEeccccccccchhhhhHHHHHHHHHHhhhhhhHHHHHhhhHHHHh
Confidence 46788999999653 4666654 589999999975422 34556889999999998887654 1
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
.+..++|++||.+...... ....|+.||+.-+.+.+..+
T Consensus 126 ~~~g~Ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~lA~e 166 (244)
T d1pr9a_ 126 GVPGAIVNVSSQCSQRAVT---------------------------------------NHSVYCSTKGALDMLTKVMALE 166 (244)
T ss_dssp TCCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcceEeeccccccccccc---------------------------------------chhhhhhhHHHHHHHHHHHHHH
Confidence 3457899999987654211 22469999999999988765
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
.|+++..+.||.|..+... ...........+.. . +|. --+...+|+|++++.++-.....
T Consensus 167 l~~~gIrvN~I~PG~v~T~~~~-------~~~~~~~~~~~~~~-~---~pl-----~R~~~peevA~~v~fL~S~~a~~- 229 (244)
T d1pr9a_ 167 LGPHKIRVNAVNPTVVMTSMGQ-------ATWSDPHKAKTMLN-R---IPL-----GKFAEVEHVVNAILFLLSDRSGM- 229 (244)
T ss_dssp HGGGTEEEEEEEECCBCSHHHH-------TTSCSHHHHHHHHT-T---CTT-----CSCBCHHHHHHHHHHHHSGGGTT-
T ss_pred hCCCcEEEEEEeeCcCcChHHh-------hhccChHHHHHHHh-c---CCC-----CCCcCHHHHHHHHHHHhCchhCC-
Confidence 6899999999998554211 11111122222211 1 111 12566789999999887543321
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
-.|+++++.+|
T Consensus 230 ---------------itG~~i~vDGG 240 (244)
T d1pr9a_ 230 ---------------TTGSTLPVEGG 240 (244)
T ss_dssp ---------------CCSCEEEESTT
T ss_pred ---------------cCCcEEEECcc
Confidence 36889998877
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.57 E-value=5.8e-07 Score=86.31 Aligned_cols=170 Identities=14% Similarity=0.140 Sum_probs=113.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc---cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh----c
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH---HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR----C 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~---~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~----~ 342 (596)
..+.++.+|+++++ .++.+++ .+|++||+||..... ..+...+++|+.|+..+++++.. .
T Consensus 50 ~~~~~~~~Dv~~~~------~v~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~~~~~ 123 (242)
T d1cyda_ 50 PGIEPVCVDLGDWD------ATEKALGGIGPVDLLVNNAALVIMQPFLEVTKEAFDRSFSVNLRSVFQVSQMVARDMINR 123 (242)
T ss_dssp TTCEEEECCTTCHH------HHHHHHTTCCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHH
T ss_pred CCCeEEEEeCCCHH------HHHHHHHHcCCCeEEEECCccccchhHHHHHHHHHHHHHHHHhccchHHHHHhchhhhhh
Confidence 46888999999654 4666665 589999999975421 23566899999999999887653 1
Q ss_pred CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh--
Q psy5825 343 SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-- 420 (596)
Q Consensus 343 ~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-- 420 (596)
....++|++||.+...... ....|+.||+.-+.+.+..+
T Consensus 124 ~~~g~ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~lA~e 164 (242)
T d1cyda_ 124 GVPGSIVNVSSMVAHVTFP---------------------------------------NLITYSSTKGAMTMLTKAMAME 164 (242)
T ss_dssp TCCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHHHHH
T ss_pred cccCcccccchhhccccCC---------------------------------------ccccccchHHHHHHHHHHHHHH
Confidence 2446899999987544211 12469999999999988765
Q ss_pred ---cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccC
Q psy5825 421 ---YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDH 497 (596)
Q Consensus 421 ---~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~ 497 (596)
.|+++..+-||.|-.+... .+.....+...+.. . .|. --+...+|+|++++.++-.....
T Consensus 165 ~~~~gIrvN~I~PG~i~T~~~~-------~~~~~~~~~~~~~~-~---~pl-----~R~~~peeva~~v~fL~S~~s~~- 227 (242)
T d1cyda_ 165 LGPHKIRVNSVNPTVVLTDMGK-------KVSADPEFARKLKE-R---HPL-----RKFAEVEDVVNSILFLLSDRSAS- 227 (242)
T ss_dssp HGGGTEEEEEEEECCBTTHHHH-------HHTCCHHHHHHHHH-H---STT-----SSCBCHHHHHHHHHHHHSGGGTT-
T ss_pred hCccCeecccCCCCCccCHHHH-------hhcCCHHHHHHHHh-c---CCC-----CCCcCHHHHHHHHHHHhCchhcC-
Confidence 7899999999988543210 00111122222211 1 111 12566799999999887543321
Q ss_pred CCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 498 GHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 498 ~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|+++++.+|
T Consensus 228 ---------------itG~~i~vDGG 238 (242)
T d1cyda_ 228 ---------------TSGGGILVDAG 238 (242)
T ss_dssp ---------------CCSSEEEESTT
T ss_pred ---------------cCCceEEeCcc
Confidence 36889998876
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=98.56 E-value=4e-07 Score=88.24 Aligned_cols=113 Identities=12% Similarity=0.070 Sum_probs=84.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+||+++. ++..++ ..+|++||+||..... ..+...+++|+.|+.++++++...
T Consensus 51 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~ 124 (257)
T d2rhca1 51 VEADGRTCDVRSVP------EIEALVAAVVERYGPVDVLVNNAGRPGGGATAELADELWLDVVETNLTGVFRVTKQVLKA 124 (257)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTT
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHhCCCCEEEecccccCCCChHHcCHHHHHHHHHHHhhhhhHHHHHHhHH
Confidence 57899999999754 344443 3589999999975321 235678999999999999988641
Q ss_pred -----CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 343 -----SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 343 -----~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
.+..++|++||...+.... ....|+.||+.-..+.+
T Consensus 125 ~~~~~~~~g~Ii~i~S~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk 165 (257)
T d2rhca1 125 GGMLERGTGRIVNIASTGGKQGVV---------------------------------------HAAPYSASKHGVVGFTK 165 (257)
T ss_dssp TSHHHHTEEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred HHHHhcCCcccccccccccccccc---------------------------------------cchhHHHHHHHHHHHHH
Confidence 2345899998887543210 12469999999999988
Q ss_pred HHh-----cCCCEEEecCCccc
Q psy5825 418 KYL-----YKLPLAMVRPSIVV 434 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~ 434 (596)
..+ .|+++..+-||.|-
T Consensus 166 ~lA~el~~~gIrVN~I~PG~i~ 187 (257)
T d2rhca1 166 ALGLELARTGITVNAVCPGFVE 187 (257)
T ss_dssp HHHHHTTTSEEEEEEEEECSBC
T ss_pred HHHHHhhhhCcEEEEEeeCCCC
Confidence 766 67899999999883
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.56 E-value=1.9e-06 Score=83.48 Aligned_cols=174 Identities=10% Similarity=0.051 Sum_probs=111.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh--------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ--------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~--------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
..+.++.+|+++.. +++.++ ..+|++||+|+.... ...+...+++|+.|+..+.+++..
T Consensus 55 ~~~~~~~~D~s~~~------~~~~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~ 128 (258)
T d1ae1a_ 55 LNVEGSVCDLLSRT------ERDKLMQTVAHVFDGKLNILVNNAGVVIHKEAKDFTEKDYNIIMGTNFEAAYHLSQIAYP 128 (258)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTTSCCCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEeecCCHH------HHHHHHHHHHHHhCCCcEEEeccccccccCccccCCHHHHhhhhhhcccccccccccccc
Confidence 56888999999654 343332 237999999997542 234567899999999999888763
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.....++|++||........ ....|+.+|..-+.+.+.
T Consensus 129 ~m~~~~~g~ii~isS~~~~~~~~---------------------------------------~~~~Y~~sK~al~~lt~~ 169 (258)
T d1ae1a_ 129 LLKASQNGNVIFLSSIAGFSALP---------------------------------------SVSLYSASKGAINQMTKS 169 (258)
T ss_dssp HHHHHTSEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccccccccccc---------------------------------------cchhHHHHHHHHHHHHHH
Confidence 13556999999988753211 224699999999999887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.+ .|+.+..+.||.|..+..... .........++..+.. ..|. --+...+|+|++++.++-..
T Consensus 170 lA~el~~~gIrvN~I~PG~i~T~~~~~~---~~~~~~~~~~~~~~~~----~~pl-----gR~~~pediA~~v~fL~S~~ 237 (258)
T d1ae1a_ 170 LACEWAKDNIRVNSVAPGVILTPLVETA---IKKNPHQKEEIDNFIV----KTPM-----GRAGKPQEVSALIAFLCFPA 237 (258)
T ss_dssp HHHHHGGGTEEEEEEEECSBC----------------CHHHHHHHHH----HSTT-----CSCBCHHHHHHHHHHHHSGG
T ss_pred HHHhcCcCcEEEEEEeeCcccCcchhhh---hhhhhhhHHHHHHHHh----cCCC-----CCCcCHHHHHHHHHHHhChh
Confidence 65 689999999999966532111 1111111222222221 1111 12678899999999988433
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|+.+.+.+|
T Consensus 238 s~~----------------itG~~i~vDGG 251 (258)
T d1ae1a_ 238 ASY----------------ITGQIIWADGG 251 (258)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hCC----------------CcCcEEEeCCC
Confidence 221 36888888776
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.56 E-value=8.4e-07 Score=85.87 Aligned_cols=115 Identities=16% Similarity=0.180 Sum_probs=85.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++ ..+|++||+||..... ..+...+++|+.|+..+++.+..
T Consensus 51 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 124 (256)
T d1k2wa_ 51 PAACAIALDVTDQA------SIDRCVAELLDRWGSIDILVNNAALFDLAPIVEITRESYDRLFAINVSGTLFMMQAVARA 124 (256)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEeeCCCHH------HHHHHHHHHHHHhCCccEEEeecccccccccccCCHHHHHhhhceeeeccccchhhccch
Confidence 67889999999654 355443 3589999999975422 23556899999999999886543
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
.....++|++||.+...... ....|+.||+.-+.+.+.
T Consensus 125 ~~~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~ 165 (256)
T d1k2wa_ 125 MIAGGRGGKIINMASQAGRRGEA---------------------------------------LVGVYCATKAAVISLTQS 165 (256)
T ss_dssp HHHHTSCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred hHHhccCCccccccchhhccccc---------------------------------------cccchhhhhhHHHHHHHH
Confidence 13456899999987643210 224699999999999877
Q ss_pred Hh-----cCCCEEEecCCccccC
Q psy5825 419 YL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~ 436 (596)
.+ .|+.+..+-||.|-.+
T Consensus 166 lA~el~~~gIrVN~V~PG~i~T~ 188 (256)
T d1k2wa_ 166 AGLNLIRHGINVNAIAPGVVDGE 188 (256)
T ss_dssp HHHHHGGGTEEEEEEEECCBCCT
T ss_pred HHHHhcccCeEEEEEecCCCCch
Confidence 65 7899999999988543
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.54 E-value=2.6e-07 Score=89.52 Aligned_cols=180 Identities=12% Similarity=0.087 Sum_probs=112.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhc------C
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRC------S 343 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~------~ 343 (596)
.++.++.+|++++. ++..++ ..+|++||+|+... ..+++..+++|+.|+.++..++... .
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDilVnnAg~~~-~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~ 126 (254)
T d2gdza1 54 QKTLFIQCDVADQQ------QLRDTFRKVVDHFGRLDILVNNAGVNN-EKNWEKTLQINLVSVISGTYLGLDYMSKQNGG 126 (254)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCC-SSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTC
T ss_pred CcEEEEEeecCCHH------HHHHHHHHHHHHcCCcCeecccccccc-cccchheeeeehhhHHHHHHHHHHHHHHhhcC
Confidence 57899999999653 344443 36899999999865 3567788999999999888887641 1
Q ss_pred CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH-----
Q psy5825 344 QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK----- 418 (596)
Q Consensus 344 ~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~----- 418 (596)
...+||++||.+.+.... ....|+.||+.-+.+.+.
T Consensus 127 ~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltrs~ala~ 167 (254)
T d2gdza1 127 EGGIIINMSSLAGLMPVA---------------------------------------QQPVYCASKHGIVGFTRSAALAA 167 (254)
T ss_dssp CCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCcEEEeeccHhhccCCC---------------------------------------CccchHHHHHHHHHHHHHHHHHH
Confidence 125699999987643210 124699999999988652
Q ss_pred -Hh-cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 419 -YL-YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 419 -~~-~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
+. .|+++..+-||.|--+......... ...........+.. . +|. .-+...+|+|++++.++....
T Consensus 168 e~~~~gIrVN~I~PG~i~T~~~~~~~~~~-~~~~~~~~~~~~~~-~---~p~-----~r~~~pedvA~~v~fL~s~~~-- 235 (254)
T d2gdza1 168 NLMNSGVRLNAICPGFVNTAILESIEKEE-NMGQYIEYKDHIKD-M---IKY-----YGILDPPLIANGLITLIEDDA-- 235 (254)
T ss_dssp HHHTCCEEEEEEEESCBSSHHHHGGGCHH-HHGGGGGGHHHHHH-H---HHH-----HCCBCHHHHHHHHHHHHHCTT--
T ss_pred HhcCCCEEEEEEEcCCCCChhhhhccccc-cccccHHHHHHHHh-c---CCC-----CCCcCHHHHHHHHHHHHcCCC--
Confidence 23 7899999999988432110000000 00000000000000 0 010 113456889999999886432
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCCCCCcccHHH
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSISSSYPITWLE 532 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~~~~~vt~~e 532 (596)
..|++++|.+| ..+.|+|
T Consensus 236 ----------------itG~~i~VdGG--~~~~~~~ 253 (254)
T d2gdza1 236 ----------------LNGAIMKITTS--KGIHFQD 253 (254)
T ss_dssp ----------------CSSCEEEEETT--TEEEECC
T ss_pred ----------------CCCCEEEECCC--Ceeeccc
Confidence 36889999888 6666554
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.53 E-value=2.3e-06 Score=82.51 Aligned_cols=171 Identities=11% Similarity=0.056 Sum_probs=110.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+||+++. +++.++ ..+|++||+||..... ..+...+++|+.|+..+++++..
T Consensus 55 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~ 128 (251)
T d1vl8a_ 55 VETMAFRCDVSNYE------EVKKLLEAVKEKFGKLDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSL 128 (251)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhc
Confidence 57889999999654 344443 3689999999975321 24566889999999999998764
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
+ .+-.++|++||........ . ....|+.||+.-+.+.+..
T Consensus 129 m~~~~~G~Ii~i~S~~~~~~~~-------------------------------------~-~~~~Y~asKaal~~lt~~l 170 (251)
T d1vl8a_ 129 LRESDNPSIINIGSLTVEEVTM-------------------------------------P-NISAYAASKGGVASLTKAL 170 (251)
T ss_dssp HTTCSSCEEEEECCGGGTCCCS-------------------------------------S-SCHHHHHHHHHHHHHHHHH
T ss_pred ccccccccccccccchhccccC-------------------------------------c-cccchHHHHHhHHHHHHHH
Confidence 2 3446899999865421100 0 1246999999999998776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+..+-||.|-.+.... .......+..+... +|. --+.-.+|+|++++.++-...
T Consensus 171 A~e~~~~gIrVN~I~PG~i~T~~~~~-------~~~~~~~~~~~~~~----~pl-----~R~~~pedvA~~v~fL~S~~a 234 (251)
T d1vl8a_ 171 AKEWGRYGIRVNVIAPGWYRTKMTEA-------VFSDPEKLDYMLKR----IPL-----GRTGVPEDLKGVAVFLASEEA 234 (251)
T ss_dssp HHHHGGGTCEEEEEEECCBCSTTTHH-------HHTCHHHHHHHHHT----CTT-----SSCBCGGGGHHHHHHHHSGGG
T ss_pred HHHhcccCeEEEEEeeCcccCHHHHh-------ccCCHHHHHHHHhc----CCC-----CCCCCHHHHHHHHHHHhCchh
Confidence 5 78999999999985542210 00111111122111 111 123456789999988875433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. -.|+++.+.+|
T Consensus 235 ~~----------------itG~~i~vDGG 247 (251)
T d1vl8a_ 235 KY----------------VTGQIIFVDGG 247 (251)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------CcCcEEEeCcC
Confidence 21 36889999877
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.52 E-value=8.4e-06 Score=77.92 Aligned_cols=166 Identities=10% Similarity=0.011 Sum_probs=109.5
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc-
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC- 342 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~- 342 (596)
++.++.+|++++. ++..++ ..+|++||+||..... ..+...+++|+.|+..+++++...
T Consensus 50 ~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m 123 (242)
T d1ulsa_ 50 GAHPVVMDVADPA------SVERGFAEALAHLGRLDGVVHYAGITRDNFHWKMPLEDWELVLRVNLTGSFLVAKAASEAM 123 (242)
T ss_dssp TCEEEECCTTCHH------HHHHHHHHHHHHHSSCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCeEEEEecCCHH------HHHHHHHHHHHhcCCceEEEECCcccccCchhhCcchhhhccccccchhhhhhhhhccccc
Confidence 5778999999654 354443 3589999999975321 245678999999999999887642
Q ss_pred --CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 343 --SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 343 --~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
.+...++++||.+..+.. ....|+.||+.-+.+.+..+
T Consensus 124 ~~~~~~~i~~~ss~~~~~~~----------------------------------------~~~~Y~asKaal~~ltk~lA 163 (242)
T d1ulsa_ 124 REKNPGSIVLTASRVYLGNL----------------------------------------GQANYAASMAGVVGLTRTLA 163 (242)
T ss_dssp TTTCCEEEEEECCGGGGCCT----------------------------------------TCHHHHHHHHHHHHHHHHHH
T ss_pred cccccceeeeeccccccCCC----------------------------------------CCcchHHHHHHHHHHHHHHH
Confidence 344567777775433310 12469999999999887765
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
.|+++..+.||.|-.+... . .+......+.. . +|. --+.-.+|+|++++.++-....
T Consensus 164 ~ela~~gIrVN~I~PG~v~T~~~~-------~--~~~~~~~~~~~-~---~pl-----~R~~~pedia~~v~fL~S~~s~ 225 (242)
T d1ulsa_ 164 LELGRWGIRVNTLAPGFIETRMTA-------K--VPEKVREKAIA-A---TPL-----GRAGKPLEVAYAALFLLSDESS 225 (242)
T ss_dssp HHHGGGTEEEEEEEECSBCCTTTS-------S--SCHHHHHHHHH-T---CTT-----CSCBCHHHHHHHHHHHHSGGGT
T ss_pred HHHhhhCcEEEEEeeCcccChhhh-------c--CCHHHHHHHHh-c---CCC-----CCCCCHHHHHHHHHHHhchhhC
Confidence 7899999999999554321 1 11222222211 1 111 1245678999999988854332
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. -.|+++.+.+|
T Consensus 226 ~----------------itG~~i~vDGG 237 (242)
T d1ulsa_ 226 F----------------ITGQVLFVDGG 237 (242)
T ss_dssp T----------------CCSCEEEESTT
T ss_pred C----------------CCCcEEEECCC
Confidence 1 36889999887
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.52 E-value=1.3e-06 Score=84.17 Aligned_cols=173 Identities=13% Similarity=0.086 Sum_probs=110.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC----hh----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR----FD----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~----~~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. +++.++ ..+|++||+|+... +. ..+...+++|+.|+.++++++..
T Consensus 51 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p 124 (250)
T d1ydea1 51 PGAVFILCDVTQED------DVKTLVSETIRRFGRLDCVVNNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALP 124 (250)
T ss_dssp TTEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCCeEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhH
Confidence 56889999999654 355443 35899999999642 21 23556889999999999998864
Q ss_pred c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 ~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
. .+-.++|++||.+...... ....|+.||..-..+.+..
T Consensus 125 ~m~~~~G~Ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~l 165 (250)
T d1ydea1 125 YLRKSQGNVINISSLVGAIGQA---------------------------------------QAVPYVATKGAVTAMTKAL 165 (250)
T ss_dssp HHHHHTCEEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHHhCCCCCccccccccccccc---------------------------------------CcchhHHHHhhHHHHHHHH
Confidence 1 1225899999987643210 2246999999999988776
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+..+-||.|--+..... ......+...+...... .|. --+...+|+|++++.++-. +
T Consensus 166 A~e~a~~gIrVN~I~PG~i~T~~~~~~---~~~~~~~~~~~~~~~~~----~pl-----~R~g~p~eva~~v~fL~Sd-a 232 (250)
T d1ydea1 166 ALDESPYGVRVNCISPGNIWTPLWEEL---AALMPDPRASIREGMLA----QPL-----GRMGQPAEVGAAAVFLASE-A 232 (250)
T ss_dssp HHHHGGGTCEEEEEEECSBCCHHHHHH---HTTSSSHHHHHHHHHHT----STT-----SSCBCHHHHHHHHHHHHHH-C
T ss_pred HHHhcccCeEEEEEeeCCCCChhHHHH---hhcCCCHHHHHHHHHhc----CCC-----CCCCCHHHHHHHHHHHhCc-c
Confidence 5 789999999999843211000 00000111122221111 111 1256678999999888743 2
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++.+.+|
T Consensus 233 ~~----------------itG~~i~vDGG 245 (250)
T d1ydea1 233 NF----------------CTGIELLVTGG 245 (250)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred CC----------------CcCCeEEECCC
Confidence 21 46889999887
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.49 E-value=3.3e-06 Score=81.89 Aligned_cols=178 Identities=12% Similarity=0.042 Sum_probs=103.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-----------hhhHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-----------DELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-----------~~~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+|++++. ++..++ ..+|++||+||.... ...++..+++|+.|+..++++
T Consensus 57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~ 130 (264)
T d1spxa_ 57 QNVNSVVADVTTDA------GQDEILSTTLGKFGKLDILVNNAGAAIPDSQSKTGTAQSIESYDATLNLNLRSVIALTKK 130 (264)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCC-------------CCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHhCCCCEeecccccccCCccccccccCCHHHHHHHHHHhHHHHHHHHhh
Confidence 46999999999654 344443 368999999986421 123566889999999999888
Q ss_pred HHhc--CCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 339 ATRC--SQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 339 a~~~--~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
+... .+-..+|+++|... ..... ....|+.||+.-+.+
T Consensus 131 ~~p~m~~~~g~iI~~~S~~~~~~~~~---------------------------------------~~~~Y~asKaal~~l 171 (264)
T d1spxa_ 131 AVPHLSSTKGEIVNISSIASGLHATP---------------------------------------DFPYYSIAKAAIDQY 171 (264)
T ss_dssp HHHHHHHHTCEEEEECCTTSSSSCCT---------------------------------------TSHHHHHHHHHHHHH
T ss_pred hCCccccccCcceeeeeeccccccCC---------------------------------------CchhhhhhhhhHHHH
Confidence 8641 12235565555432 21100 124599999999988
Q ss_pred HHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHH
Q psy5825 416 VEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVV 490 (596)
Q Consensus 416 v~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~ 490 (596)
.+..+ .|+++..+-||.|--+..................+..+.. .+|. --+...+|+|++++.++
T Consensus 172 t~~lA~el~~~gIrVN~V~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~----~~Pl-----~R~g~pedvA~~v~fL~ 242 (264)
T d1spxa_ 172 TRNTAIDLIQHGIRVNSISPGLVATGFGSAMGMPEETSKKFYSTMATMKE----CVPA-----GVMGQPQDIAEVIAFLA 242 (264)
T ss_dssp HHHHHHHHGGGTCEEEEEEECCBCCCC--------------HHHHHHHHH----HCTT-----SSCBCHHHHHHHHHHHH
T ss_pred HHHHHHHhcccCeEEEEEeeCCCCCcchhccCCcHHHHHHHHHHHHHHHh----cCCC-----CCCcCHHHHHHHHHHHh
Confidence 87765 7899999999998544321110000000000111111111 1111 12456789999999888
Q ss_pred HhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 491 WKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 491 ~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
-..... +..|+++.+.+|
T Consensus 243 S~~~s~---------------~itG~~i~vDGG 260 (264)
T d1spxa_ 243 DRKTSS---------------YIIGHQLVVDGG 260 (264)
T ss_dssp CHHHHT---------------TCCSCEEEESTT
T ss_pred CCcccC---------------CccCceEEeCCC
Confidence 533221 036889999877
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=98.49 E-value=3e-06 Score=81.00 Aligned_cols=114 Identities=19% Similarity=0.236 Sum_probs=84.9
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|++||+|+...+ ...+...+++|+.|+..+++++...
T Consensus 57 ~~~~~~~~Dvt~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~ 130 (240)
T d2bd0a1 57 ALTDTITADISDMA------DVRRLTTHIVERYGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFAL 130 (240)
T ss_dssp CEEEEEECCTTSHH------HHHHHHHHHHHHTSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEecCCCHH------HHHHHHHHHHHHcCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHH
Confidence 57889999999754 344443 358999999997542 1345678999999999998888641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+-.++|++||++.+.... ....|+.||+.-+.+.+..
T Consensus 131 m~~~~~G~Ii~isS~~~~~~~~---------------------------------------~~~~Y~asK~al~~lt~~l 171 (240)
T d2bd0a1 131 MERQHSGHIFFITSVAATKAFR---------------------------------------HSSIYCMSKFGQRGLVETM 171 (240)
T ss_dssp HHHHTCEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCCceEEEechhhcCCCC---------------------------------------CChHHHHHHHHHHHHHHHH
Confidence 2446899999987653210 1246999999998888776
Q ss_pred h-----cCCCEEEecCCcccc
Q psy5825 420 L-----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G 435 (596)
+ .|+.+..+-||.|-.
T Consensus 172 a~el~~~gIrvn~i~PG~v~T 192 (240)
T d2bd0a1 172 RLYARKCNVRITDVQPGAVYT 192 (240)
T ss_dssp HHHHTTTTEEEEEEEECCBCS
T ss_pred HHHhCcCCeEEEEeeeCcccC
Confidence 5 789999999998844
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=98.49 E-value=1e-06 Score=85.43 Aligned_cols=171 Identities=15% Similarity=0.155 Sum_probs=111.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------c-cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------H-HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~-~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..++ . .+|++||+|+..... ..+...+++|+.|+.++.+++..
T Consensus 57 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~~~~idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~ 130 (259)
T d2ae2a_ 57 FKVEASVCDLSSRS------ERQELMNTVANHFHGKLNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHP 130 (259)
T ss_dssp CEEEEEECCTTCHH------HHHHHHHHHHHHTTTCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CCceEEEeeCCCHH------HHHHHHHHHHHHhCCCceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccc
Confidence 57889999999654 233332 2 489999999975421 24566899999999999888754
Q ss_pred c---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 C---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
. .+-.++|++||++...... ....|+.||+.-+.+.+.
T Consensus 131 ~m~~~~~G~Ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~ 171 (259)
T d2ae2a_ 131 FLKASERGNVVFISSVSGALAVP---------------------------------------YEAVYGATKGAMDQLTRC 171 (259)
T ss_dssp HHHHTSSEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred hhhhhcccccccccccccccccc---------------------------------------cccchHHHHHHHHHHHHH
Confidence 1 3456899999987643210 224699999999998887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCc--HHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGP--GGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~--~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
.+ .|+.+..+-||.|-.+.... ....+ ...+..+.. .+|. . -+.-.+|+|++++.++-
T Consensus 172 lA~el~~~gIrVN~I~PG~i~T~~~~~------~~~~~~~~~~~~~~~~----~~pl---~--R~g~pedvA~~v~fL~S 236 (259)
T d2ae2a_ 172 LAFEWAKDNIRVNGVGPGVIATSLVEM------TIQDPEQKENLNKLID----RCAL---R--RMGEPKELAAMVAFLCF 236 (259)
T ss_dssp HHHHTGGGTEEEEEEEECSBCSHHHHH------HTTSHHHHHHHHHHHH----TSTT---C--SCBCHHHHHHHHHHHHS
T ss_pred HHHHhCcCceEEEEeeeCcccCHHHHh------hhhchhhHHHHHHHHh----cCCC---C--CCcCHHHHHHHHHHHhC
Confidence 65 68999999999885431100 00011 011111111 1111 1 24567899999998885
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|+++.+.+|
T Consensus 237 ~~s~~----------------itG~~i~VDGG 252 (259)
T d2ae2a_ 237 PAASY----------------VTGQIIYVDGG 252 (259)
T ss_dssp GGGTT----------------CCSCEEEESTT
T ss_pred chhCC----------------CcCcEEEECCC
Confidence 43321 36889998877
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.44 E-value=1.8e-06 Score=83.47 Aligned_cols=115 Identities=16% Similarity=0.171 Sum_probs=84.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-----------cccEEEEcCccCC------hh----hhHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-----------HIHVIIHAAASLR------FD----ELIQDAFTLNIQATREL 335 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-----------~vd~ViH~AA~v~------~~----~~~~~~~~~NV~GT~~L 335 (596)
.++.++.+||+++. ++..+++ .+|++||+||... +. ..+..++.+|+.|+..+
T Consensus 60 ~~~~~~~~Dvs~~~------~v~~l~~~~~~~~~~~~~~~~~lvnnag~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l 133 (259)
T d1oaaa_ 60 LKVVLAAADLGTEA------GVQRLLSAVRELPRPEGLQRLLLINNAATLGDVSKGFLNVNDLAEVNNYWALNLTSMLCL 133 (259)
T ss_dssp SEEEEEECCTTSHH------HHHHHHHHHHHSCCCTTCCEEEEEECCCCCCCCSSCGGGCCCHHHHHHHHHHHTHHHHHH
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHhhhhccCceEEEEecccccccCCCCccccCCHHHHHHHHHHhhhhhHHH
Confidence 47899999999654 3555532 3579999998642 11 23566889999999999
Q ss_pred HHHHHhc-CC----CceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHH
Q psy5825 336 LDLATRC-SQ----LKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKA 410 (596)
Q Consensus 336 L~~a~~~-~~----vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~ 410 (596)
++++... .. ..++|++||.+.+.... ....|+.||+
T Consensus 134 ~~~~~~~m~~~~~~~g~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKa 174 (259)
T d1oaaa_ 134 TSGTLNAFQDSPGLSKTVVNISSLCALQPYK---------------------------------------GWGLYCAGKA 174 (259)
T ss_dssp HHHHHHTSCCCTTCEEEEEEECCGGGTSCCT---------------------------------------TCHHHHHHHH
T ss_pred HHHHHHHHHhcCCCcccccccccccccCCCc---------------------------------------cchHHHHHHH
Confidence 9998752 11 24799999987643210 2246999999
Q ss_pred HHHHHHHHHh---cCCCEEEecCCccccC
Q psy5825 411 IGESVVEKYL---YKLPLAMVRPSIVVST 436 (596)
Q Consensus 411 ~aE~lv~~~~---~gl~~~IlRp~~V~G~ 436 (596)
..+.+.+.++ +|+.+..+.||.|-.+
T Consensus 175 al~~lt~~la~e~~gIrVn~v~PG~i~T~ 203 (259)
T d1oaaa_ 175 ARDMLYQVLAAEEPSVRVLSYAPGPLDND 203 (259)
T ss_dssp HHHHHHHHHHHHCTTEEEEEEECCSBSSH
T ss_pred HHHHHHHHHHhCCCCCEEEEEEcCCCCCH
Confidence 9999998877 8899999999988543
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.43 E-value=1.1e-06 Score=85.19 Aligned_cols=114 Identities=11% Similarity=0.141 Sum_probs=84.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC----hh----hhHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR----FD----ELIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~----~~----~~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.++.++.+|++++. ++..++ ..+|++||+||... +. ..+...+++|+.|+..+++++..
T Consensus 54 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~ 127 (260)
T d1zema1 54 VEARSYVCDVTSEE------AVIGTVDSVVRDFGKIDFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSR 127 (260)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHH
T ss_pred CcEEEEEccCCCHH------HHHHHHHHHHHHhCCCCeehhhhccccccCccccccHHHHHhhccccccccccchhhHHh
Confidence 57899999999654 344443 36899999999653 21 23556889999999999988754
Q ss_pred -c--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 -C--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 -~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
+ .+-.++|++||++.+.... ....|+.||+.-+.+.+.
T Consensus 128 ~m~~~~~G~II~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk~ 168 (260)
T d1zema1 128 QMITQNYGRIVNTASMAGVKGPP---------------------------------------NMAAYGTSKGAIIALTET 168 (260)
T ss_dssp HHHHHTCEEEEEECCHHHHSCCT---------------------------------------TBHHHHHHHHHHHHHHHH
T ss_pred hhhhhcCCCCCeeechhhccCCc---------------------------------------chHHHHHHHHHHHHHHHH
Confidence 1 3456999999987643210 124699999999998877
Q ss_pred Hh-----cCCCEEEecCCcccc
Q psy5825 419 YL-----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G 435 (596)
.+ .|+.+..+-||.|-.
T Consensus 169 lA~el~~~gIrVN~I~PG~v~T 190 (260)
T d1zema1 169 AALDLAPYNIRVNAISPGYMGP 190 (260)
T ss_dssp HHHHHGGGTEEEEEEEECSBCS
T ss_pred HHHHhhhhCCEEEEeccCcccC
Confidence 65 789999999999854
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.42 E-value=5.2e-06 Score=79.96 Aligned_cols=173 Identities=11% Similarity=0.056 Sum_probs=109.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.+..++.+|++++. +++.++ ..+|++||+|+.... ...+...+++|+.|+..+++++..
T Consensus 52 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~ 125 (253)
T d1hxha_ 52 ERSMFVRHDVSSEA------DWTLVMAAVQRRLGTLNVLVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAA 125 (253)
T ss_dssp TTEEEECCCTTCHH------HHHHHHHHHHHHHCSCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCeEEEEeecCCHH------HHHHHHHHHHHHhCCCCeEEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHH
Confidence 67889999999643 344443 358999999997532 134567899999999999888764
Q ss_pred c-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 C-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 ~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
+ .+-.++|++||.+...... ....|+.||+..+.+.+..+
T Consensus 126 m~~~~G~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~lA 166 (253)
T d1hxha_ 126 MKETGGSIINMASVSSWLPIE---------------------------------------QYAGYSASKAAVSALTRAAA 166 (253)
T ss_dssp HTTTCEEEEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCceecccchhhhcCcc---------------------------------------ccccccchhHHHHHHHHHHH
Confidence 1 2347899999987643210 22469999999998887654
Q ss_pred -----c--CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 421 -----Y--KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 421 -----~--gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
. ++++..+-||.|..+... .+... .... ....... + ....--+...+|+|++++.++-..
T Consensus 167 ~e~~~~g~~IrVN~I~PG~i~T~~~~---~~~~~--~~~~---~~~~~~~---~--~~~~gr~~~pedvA~~v~fL~S~~ 233 (253)
T d1hxha_ 167 LSCRKQGYAIRVNSIHPDGIYTPMMQ---ASLPK--GVSK---EMVLHDP---K--LNRAGRAYMPERIAQLVLFLASDE 233 (253)
T ss_dssp HHHHHHTCCEEEEEEEESEECCHHHH---HHSCT--TCCH---HHHBCBT---T--TBTTCCEECHHHHHHHHHHHHSGG
T ss_pred HHHhhcCCCEEEEEEeECCCcCHhHH---hhCcc--hhhH---HHHHhCc---c--ccccCCCCCHHHHHHHHHHHhChh
Confidence 2 488899999988443110 00000 0000 0111000 0 001113566799999999887543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... -.|+++++.+|
T Consensus 234 s~~----------------itG~~i~VDGG 247 (253)
T d1hxha_ 234 SSV----------------MSGSELHADNS 247 (253)
T ss_dssp GTT----------------CCSCEEEESSS
T ss_pred hCC----------------CcCcEEEECcc
Confidence 321 36889999776
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.42 E-value=1.9e-06 Score=84.06 Aligned_cols=175 Identities=15% Similarity=0.110 Sum_probs=106.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh--------hh---hHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF--------DE---LIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~--------~~---~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+|++++. ++..++ ..+|++||+|+.... .. .+...+++|+.|+..++++
T Consensus 57 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~g~iDilvnnAG~~~~~~~~~~~~d~~~~~~~~~~~vNl~~~~~~~~~ 130 (272)
T d1xkqa_ 57 KQVNSVVADVTTED------GQDQIINSTLKQFGKIDVLVNNAGAAIPDAFGTTGTDQGIDIYHKTLKLNLQAVIEMTKK 130 (272)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCTTCCCGGGSCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHhCCceEEEeCCcccCcccccccchhccHHHHHHHHHhhhhHHHHHHHh
Confidence 46899999999754 344443 358999999987531 11 2566889999999999988
Q ss_pred HHhc--CCCceEEEecC-cccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 339 ATRC--SQLKAILHVST-LYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 339 a~~~--~~vkrfV~vSS-~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
+... .+-..+|+++| .+...... ....|+.||+.-..+
T Consensus 131 ~~p~m~~~~g~iI~~~Ss~a~~~~~~---------------------------------------~~~~Y~asKaal~~l 171 (272)
T d1xkqa_ 131 VKPHLVASKGEIVNVSSIVAGPQAQP---------------------------------------DFLYYAIAKAALDQY 171 (272)
T ss_dssp HHHHHHHHTCEEEEECCGGGSSSCCC---------------------------------------SSHHHHHHHHHHHHH
T ss_pred hcccccccCCccccccchhccccCCC---------------------------------------CcchhhhHHHHHHHH
Confidence 7641 12234555554 33222100 124699999999988
Q ss_pred HHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHH---HHHHHhccceEeecCCCCccccccHHHHHHHHH
Q psy5825 416 VEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGA---AAGAALGLIHTFYAKHDKKCDLIPVDVATNMML 487 (596)
Q Consensus 416 v~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l---~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii 487 (596)
.+..+ .|+.+..+-||.|-.+... ........ +..........+|. --+.-.+|+|++++
T Consensus 172 tk~lA~el~~~gIrVN~I~PG~i~T~~~~-------~~~~~~~~~~~~~~~~~~~~~~~Pl-----gR~g~pediA~~v~ 239 (272)
T d1xkqa_ 172 TRSTAIDLAKFGIRVNSVSPGMVETGFTN-------AMGMPDQASQKFYNFMASHKECIPI-----GAAGKPEHIANIIL 239 (272)
T ss_dssp HHHHHHHHHTTTCEEEEEEECCBCSSHHH-------HTTCCHHHHHHHHHHHHHCTTTCTT-----SSCBCHHHHHHHHH
T ss_pred HHHHHHHhcccCeEEEEEeeCCCcchhhh-------ccCCchHHHHHHHHHHHHHhcCCCC-----CCCcCHHHHHHHHH
Confidence 87765 7899999999998443210 01111111 11111111111111 12556789999999
Q ss_pred HHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 488 GVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 488 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.++-..... +..|+++.+.+|
T Consensus 240 fL~S~~as~---------------~iTG~~i~vDGG 260 (272)
T d1xkqa_ 240 FLADRNLSF---------------YILGQSIVADGG 260 (272)
T ss_dssp HHHCHHHHT---------------TCCSCEEEESTT
T ss_pred HHhCcchhC---------------CccCeEEEeCcC
Confidence 887432211 036889999887
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.41 E-value=2.5e-06 Score=83.32 Aligned_cols=178 Identities=13% Similarity=0.035 Sum_probs=109.4
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCC-----hh----hhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLR-----FD----ELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~-----~~----~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.++.++.+|++++. ++..++ ..+|++||+||... +. ..+...+++|+.|+..+++++.
T Consensus 56 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~G~iDilVnnAG~~~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~ 129 (274)
T d1xhla_ 56 EKINAVVADVTEAS------GQDDIINTTLAKFGKIDILVNNAGANLADGTANTDQPVELYQKTFKLNFQAVIEMTQKTK 129 (274)
T ss_dssp GGEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCSCCGGGSCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred cceEEEEeeCCCHH------HHHHHHHHHHHHcCCceEEEeecccccccccccccCCHHHHHHHHhhccccccccccccc
Confidence 47899999999754 344443 35899999998532 11 2356688999999999988886
Q ss_pred hc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 341 RC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 341 ~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
.. .+-..++++||.+...... ....|+.||..-+.+.+
T Consensus 130 ~~m~~~~~g~ii~~ss~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk 170 (274)
T d1xhla_ 130 EHLIKTKGEIVNVSSIVAGPQAHS---------------------------------------GYPYYACAKAALDQYTR 170 (274)
T ss_dssp HHHHHTTCEEEEECCGGGSSSCCT---------------------------------------TSHHHHHHHHHHHHHHH
T ss_pred ccccccccccccchhhhhccccCC---------------------------------------CCceehhhhhHHHHHHH
Confidence 41 3456788887765432100 12459999999999887
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+ .|+++..+-||.|-.+... ..........-+..........+|. --+...+|+|++++.++-.
T Consensus 171 ~lA~ela~~gIrVN~I~PG~i~T~~~~----~~~~~~~~~~~~~~~~~~~~~~iPl-----gR~g~pediA~~v~fL~S~ 241 (274)
T d1xhla_ 171 CTAIDLIQHGVRVNSVSPGAVATGFMG----AMGLPETASDKLYSFIGSRKECIPV-----GHCGKPEEIANIIVFLADR 241 (274)
T ss_dssp HHHHHHGGGTCEEEEEEECCBCSSHHH----HTTCCHHHHHHHHHHHHHCTTTCTT-----SSCBCHHHHHHHHHHHHCH
T ss_pred HHHHHHhHhCCceeeeccCCCcCchhh----hhcccchhhHHHHHHHHHHHcCCCC-----CCCcCHHHHHHHHHHHcCC
Confidence 655 7899999999998443110 0000000001111111111111111 1245679999999988742
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... -.|+++++.+|
T Consensus 242 d~s~~---------------itG~~i~vDGG 257 (274)
T d1xhla_ 242 NLSSY---------------IIGQSIVADGG 257 (274)
T ss_dssp HHHTT---------------CCSCEEEESTT
T ss_pred ccccC---------------ccCcEEEeCcC
Confidence 21110 36889999887
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.40 E-value=3.5e-06 Score=83.22 Aligned_cols=171 Identities=9% Similarity=0.030 Sum_probs=110.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+|++++. ++..++ ..+|++||+|+.... ...+..++++|+.|+..+++++...
T Consensus 66 ~~~~~~~~Dvs~~~------~v~~~~~~~~~~~G~iDiLVnnAg~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~ 139 (297)
T d1yxma1 66 ARVIPIQCNIRNEE------EVNNLVKSTLDTFGKINFLVNNGGGQFLSPAEHISSKGWHAVLETNLTGTFYMCKAVYSS 139 (297)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEeccCCCHH------HHHHHHHHHHHHhCCeEEEEeeccccccCchhhhhhhhhhhhhcccccchhhHHHHHHHh
Confidence 57999999999754 344443 368999999996532 1345668999999999999988641
Q ss_pred ---CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 343 ---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 343 ---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
.+...+|++|+.+..+.. ....|+.||+.-+.+.+..
T Consensus 140 m~~~~~g~Ii~~ss~~~~~~~----------------------------------------~~~~Y~asKaal~~ltk~l 179 (297)
T d1yxma1 140 WMKEHGGSIVNIIVPTKAGFP----------------------------------------LAVHSGAARAGVYNLTKSL 179 (297)
T ss_dssp THHHHCEEEEEECCCCTTCCT----------------------------------------TCHHHHHHHHHHHHHHHHH
T ss_pred hcccccccccccccccccccc----------------------------------------ccccchhHHHHHHHHHHHH
Confidence 234567877765432210 2246999999999988876
Q ss_pred h-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 420 L-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 420 ~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
+ .|+.+..+.||.|..+.. ...+..... .........+|. --+...+|+|++++.++-...
T Consensus 180 A~el~~~gIrVN~I~PG~i~T~~~------~~~~~~~~~---~~~~~~~~~~pl-----gR~g~pedvA~~v~fL~Sd~s 245 (297)
T d1yxma1 180 ALEWACSGIRINCVAPGVIYSQTA------VENYGSWGQ---SFFEGSFQKIPA-----KRIGVPEEVSSVVCFLLSPAA 245 (297)
T ss_dssp HHHTGGGTEEEEEEEECSBCCTGG------GTTSGGGGG---GGGTTGGGGSTT-----SSCBCTHHHHHHHHHHHSGGG
T ss_pred HHHhcccCceEEEeeeCcCcCcch------hhhccccCH---HHHHHHHhcCCC-----CCCcCHHHHHHHHHHHhCchh
Confidence 6 789999999999865421 111100000 011111111111 124456899999999885433
Q ss_pred ccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 495 LDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 495 ~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.. ..|+++.|.+|
T Consensus 246 ~~----------------iTG~~i~VDGG 258 (297)
T d1yxma1 246 SF----------------ITGQSVDVDGG 258 (297)
T ss_dssp TT----------------CCSCEEEESTT
T ss_pred cC----------------cCCcEEEeCcC
Confidence 21 46899999887
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.40 E-value=5.5e-06 Score=79.80 Aligned_cols=170 Identities=13% Similarity=-0.000 Sum_probs=108.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------h----hhHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------D----ELIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~----~~~~~~~~~NV~GT~~LL~~ 338 (596)
.++.++.+|++++. +++.++ ..+|++||+|+.... . ..+...+++|+.|+..++++
T Consensus 58 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~ 131 (256)
T d1ulua_ 58 GGALLFRADVTQDE------ELDALFAGVKEAFGGLDYLVHAIAFAPREAMEGRYIDTRRQDWLLALEVSAYSLVAVARR 131 (256)
T ss_dssp TCCEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCHHHHSSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CcccccccccCCHH------HHHHHHHHHHHhcCCceEEEeccccccccccccchhhhhhhhhhHhhhhhHHHHHHHHHH
Confidence 46778999999653 344443 368999999986421 1 12445789999999999988
Q ss_pred HHhc-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 339 ATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 339 a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
+... ..-.++|++||........ ....|+.||+.-+.+.+
T Consensus 132 ~~~~~~~~G~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltr 172 (256)
T d1ulua_ 132 AEPLLREGGGIVTLTYYASEKVVP---------------------------------------KYNVMAIAKAALEASVR 172 (256)
T ss_dssp HTTTEEEEEEEEEEECGGGTSBCT---------------------------------------TCHHHHHHHHHHHHHHH
T ss_pred HHHHhccCCEEEEEeehHhcCCCC---------------------------------------CchHHHHHHHHHHHHHH
Confidence 8641 1235799999987643210 22469999999999987
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+ +|+++..+.||.|..+..... .....+...+.. . .|. --+...+|+|++++.++-.
T Consensus 173 ~lA~ela~~gIrVN~I~PG~i~t~~~~~~-------~~~~~~~~~~~~-~---~pl-----~R~~~pedvA~~v~fL~S~ 236 (256)
T d1ulua_ 173 YLAYELGPKGVRVNAISAGPVRTVAARSI-------PGFTKMYDRVAQ-T---APL-----RRNITQEEVGNLGLFLLSP 236 (256)
T ss_dssp HHHHHHGGGTCEEEEEEECCC-----------------CHHHHHHHHH-H---STT-----SSCCCHHHHHHHHHHHHSG
T ss_pred HHHHHhcccCCEEeeeccceeeeccccch-------hhhHHHHHHHHh-c---CCC-----CCCcCHHHHHHHHHHHhCc
Confidence 766 789999999999865432111 111222222221 1 111 1245678999999988854
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... -.|+++.+.+|
T Consensus 237 ~s~~----------------itG~~i~VDGG 251 (256)
T d1ulua_ 237 LASG----------------ITGEVVYVDAG 251 (256)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred hhCC----------------ccCCeEEECcC
Confidence 3321 36889998877
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.40 E-value=4.1e-06 Score=81.77 Aligned_cols=116 Identities=14% Similarity=0.111 Sum_probs=82.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh------------hhHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD------------ELIQDAFTLNIQATRELLD 337 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~------------~~~~~~~~~NV~GT~~LL~ 337 (596)
.++.++.+|++++. ++..++ ..+|++||+|+...+. ..++..+++|+.|+..+++
T Consensus 51 ~~~~~~~~Dv~~~~------~~~~~~~~~~~~~g~idilvnnAG~~~~~~~~~~~~~e~~~~~~~~~~~vNl~g~~~~~~ 124 (276)
T d1bdba_ 51 DNVLGIVGDVRSLE------DQKQAASRCVARFGKIDTLIPNAGIWDYSTALVDLPEESLDAAFDEVFHINVKGYIHAVK 124 (276)
T ss_dssp GGEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEECCCCCCCTTCCGGGSCTTTHHHHHHHHHHHHTHHHHHHHH
T ss_pred CCeeEEecccccHH------HHHHHHHHHHHHhCCcccccccccccCCCCccccccccchhhhhhHHHHHhhHHHHHHHH
Confidence 57899999999654 344443 3689999999964321 1256789999999999988
Q ss_pred HHHhc--CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHH
Q psy5825 338 LATRC--SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESV 415 (596)
Q Consensus 338 ~a~~~--~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~l 415 (596)
++... .+-.++|++||...+-... ....|+.||+.-+.+
T Consensus 125 ~~~p~m~~~~g~iI~i~S~~~~~~~~---------------------------------------~~~~Y~asKaal~~l 165 (276)
T d1bdba_ 125 ACLPALVASRGNVIFTISNAGFYPNG---------------------------------------GGPLYTAAKHAIVGL 165 (276)
T ss_dssp HHHHHHHHHTCEEEEECCGGGTSTTS---------------------------------------SCHHHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCceeeeechhccCCC---------------------------------------CCchHHHHHHHHHHH
Confidence 87531 1225788888865432100 124599999999999
Q ss_pred HHHHh----cCCCEEEecCCccccCC
Q psy5825 416 VEKYL----YKLPLAMVRPSIVVSTW 437 (596)
Q Consensus 416 v~~~~----~gl~~~IlRp~~V~G~~ 437 (596)
.+..+ +++++..+.||.|-.+.
T Consensus 166 tr~lA~ela~~IrVN~I~PG~i~T~~ 191 (276)
T d1bdba_ 166 VRELAFELAPYVRVNGVGSGGINSDL 191 (276)
T ss_dssp HHHHHHHHTTTCEEEEEEECCCCSCC
T ss_pred HHHHHHHhhcceEEcccCCCCEecCc
Confidence 88766 56999999999985543
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=98.39 E-value=3.4e-06 Score=80.26 Aligned_cols=169 Identities=7% Similarity=-0.015 Sum_probs=108.4
Q ss_pred cEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc---CCCce
Q psy5825 278 KVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC---SQLKA 347 (596)
Q Consensus 278 rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~---~~vkr 347 (596)
...++.+|+++. .+.+..-+..+|++||+|+.... ...+...+++|+.|+..+++++... .+..+
T Consensus 45 ~~~~~~~Dv~~~-----~~~~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~G~ 119 (234)
T d1o5ia_ 45 GHRYVVCDLRKD-----LDLLFEKVKEVDILVLNAGGPKAGFFDELTNEDFKEAIDSLFLNMIKIVRNYLPAMKEKGWGR 119 (234)
T ss_dssp CSEEEECCTTTC-----HHHHHHHSCCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEE
T ss_pred CCcEEEcchHHH-----HHHHHHHhCCCcEEEecccccCCcchhhhhhHHHHHHhhhhhhhhhhhhhccccccccccccc
Confidence 446778999753 22333445679999999996532 1235568899999999988887531 24468
Q ss_pred EEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cC
Q psy5825 348 ILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YK 422 (596)
Q Consensus 348 fV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~g 422 (596)
+|++||........ ....|+.||+.-+.+.+.++ .|
T Consensus 120 ii~i~S~~~~~~~~---------------------------------------~~~~Y~asKaal~~ltk~lA~ela~~g 160 (234)
T d1o5ia_ 120 IVAITSFSVISPIE---------------------------------------NLYTSNSARMALTGFLKTLSFEVAPYG 160 (234)
T ss_dssp EEEECCGGGTSCCT---------------------------------------TBHHHHHHHHHHHHHHHHHHHHHGGGT
T ss_pred cccccccccccccc---------------------------------------ccccchhHHHHHHHHHHHHHHHhcccC
Confidence 99999977544211 22469999999998887765 78
Q ss_pred CCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCC
Q psy5825 423 LPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAP 502 (596)
Q Consensus 423 l~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~ 502 (596)
+++..+.||.|-.+... . .. .... ....... +| .--+...+|+|++++.++-.....
T Consensus 161 IrVN~I~PG~v~T~~~~---~----~~-~~~~-~~~~~~~---~p-----l~R~~~pediA~~v~fL~S~~s~~------ 217 (234)
T d1o5ia_ 161 ITVNCVAPGWTETERVK---E----LL-SEEK-KKQVESQ---IP-----MRRMAKPEEIASVVAFLCSEKASY------ 217 (234)
T ss_dssp EEEEEEEECSBCCTTHH---H----HS-CHHH-HHHHHTT---ST-----TSSCBCHHHHHHHHHHHHSGGGTT------
T ss_pred eEEeecccCccchhhhh---h----hc-CHHH-HHHHHhc---CC-----CCCCcCHHHHHHHHHHHhChhhcC------
Confidence 99999999988543210 0 00 0111 1111111 11 112567899999999887543221
Q ss_pred CCCcCCCCCCCCCCeEEccCC
Q psy5825 503 PASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 503 ~~~~~~~~~~~~~~vyni~~~ 523 (596)
-.|+++.+.+|
T Consensus 218 ----------itG~~i~vDGG 228 (234)
T d1o5ia_ 218 ----------LTGQTIVVDGG 228 (234)
T ss_dssp ----------CCSCEEEESTT
T ss_pred ----------CcCcEEEECcc
Confidence 36899999877
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.29 E-value=3.4e-05 Score=74.77 Aligned_cols=179 Identities=10% Similarity=0.012 Sum_probs=110.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++ ..+|++||+|+...+. ..+...+.+|+.|+..+++++..
T Consensus 68 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~ 141 (272)
T d1g0oa_ 68 SDAACVKANVGVVE------DIVRMFEEAVKIFGKLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKH 141 (272)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHHSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceeeEeCCCCCHH------HHHHHHHHHHHHhCCCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeeccccccc
Confidence 57899999999654 344443 4579999999976422 23456889999999999999875
Q ss_pred cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 342 CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 342 ~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
+..-.++++++|+....... . ....|+.||+.-+.+++..+
T Consensus 142 m~~~g~~i~i~s~~~~~~~~-------------------------------------~-~~~~Y~asKaal~~ltk~lA~ 183 (272)
T d1g0oa_ 142 LEIGGRLILMGSITGQAKAV-------------------------------------P-KHAVYSGSKGAIETFARCMAI 183 (272)
T ss_dssp SCTTCEEEEECCGGGTCSSC-------------------------------------S-SCHHHHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccccccc-------------------------------------c-chhhHHHHHHHHHHHHHHHHH
Confidence 33345778887765322100 0 22469999999999887655
Q ss_pred ----cCCCEEEecCCccccCCCCCcc-ccCCC-CCCcH-HHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIV-GWSNN-LYGPG-GAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~-G~~~~-~~~~~-~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.|+++..+.||.|-.+...... .+... ..... .+....... ..|. --+...+|||.+++.++-..
T Consensus 184 e~~~~gIrVN~I~PG~v~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~Pl-----gR~~~peevA~~v~fL~s~~ 255 (272)
T d1g0oa_ 184 DMADKKITVNVVAPGGIKTDMYHAVCREYIPNGENLSNEEVDEYAAVQ---WSPL-----RRVGLPIDIARVVCFLASND 255 (272)
T ss_dssp HHGGGTCEEEEEEECCBSSHHHHHHGGGGSTTCTTCCHHHHHHHHHHH---SCTT-----CSCBCHHHHHHHHHHHHSGG
T ss_pred HhchhCeEEEEEccCCcCChHHHHHHHhhhhcccccchHHHHHHHHHc---cCCC-----CCCcCHHHHHHHHHHHhCch
Confidence 7899999999998443110000 00000 00011 111111111 1111 12567799999999988543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... ..|++..+.+|
T Consensus 256 s~~----------------itG~~i~vDGG 269 (272)
T d1g0oa_ 256 GGW----------------VTGKVIGIDGG 269 (272)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hcC----------------ccCceEeECCC
Confidence 321 36888988887
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=98.27 E-value=6.4e-06 Score=79.56 Aligned_cols=178 Identities=13% Similarity=0.056 Sum_probs=109.2
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++ ..+|++||+|+..... ..++..+.+|+.|...+++++..
T Consensus 56 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 129 (259)
T d1ja9a_ 56 AQGVAIQADISKPS------EVVALFDKAVSHFGGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKH 129 (259)
T ss_dssp CCEEEEECCTTSHH------HHHHHHHHHHHHHSCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CCceEecCCCCCHH------HHHHHHHHHHHHcCCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhh
Confidence 57899999999643 344433 3689999999975321 23556889999999999999875
Q ss_pred cCCCceEEEecCccc-ccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 CSQLKAILHVSTLYT-HSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 ~~~vkrfV~vSS~~v-~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
+..-.++++++|.+. +.... ....|+.||+.-+.+++..+
T Consensus 130 m~~~g~~iii~s~~~~~~~~~---------------------------------------~~~~Y~asK~al~~l~r~lA 170 (259)
T d1ja9a_ 130 CRRGGRIILTSSIAAVMTGIP---------------------------------------NHALYAGSKAAVEGFCRAFA 170 (259)
T ss_dssp EEEEEEEEEECCGGGTCCSCC---------------------------------------SCHHHHHHHHHHHHHHHHHH
T ss_pred hhcCCcccccccccccccCCC---------------------------------------CchhHHHHHHHHHHHHHHHH
Confidence 222245666655432 21100 12469999999998887765
Q ss_pred -----cCCCEEEecCCccccCCCCCcc--ccC-CCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIV--GWS-NNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~--G~~-~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.|+.+..+.||.|-.+...... ... .....+...+...+.... | ..-+...+|||++++.++-.
T Consensus 171 ~e~~~~gIrvN~I~PG~i~T~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---p-----l~R~g~p~eVa~~v~fL~S~ 242 (259)
T d1ja9a_ 171 VDCGAKGVTVNCIAPGGVKTDMFDENSWHYAPGGYKGMPQEKIDEGLANMN---P-----LKRIGYPADIGRAVSALCQE 242 (259)
T ss_dssp HHHGGGTCEEEEEEECCBSSHHHHHHGGGTSTTCCTTCCHHHHHHHHHHTS---T-----TSSCBCHHHHHHHHHHHHSG
T ss_pred HHHhhcCeEEeccCcCCccChhhhhhhhhhhhhhcccCCHHHHHHHHHhCC---C-----CCCCcCHHHHHHHHHHHhCc
Confidence 7899999999998432100000 000 000111122222221111 1 11356788999999998865
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... -.|+++++.+|
T Consensus 243 ~a~~----------------itG~~i~vDGG 257 (259)
T d1ja9a_ 243 ESEW----------------INGQVIKLTGG 257 (259)
T ss_dssp GGTT----------------CCSCEEEESTT
T ss_pred hhcC----------------CcCceEEeCCC
Confidence 4431 36889988876
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=98.25 E-value=1.2e-05 Score=76.78 Aligned_cols=167 Identities=10% Similarity=0.018 Sum_probs=108.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+||+++. ++..++ ..+|++||+|+..... ..+...+++|+.++..+++++...
T Consensus 51 ~~~~~~~~Dls~~~------~i~~~~~~i~~~~g~iDiLinnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~k~~~~~ 124 (241)
T d2a4ka1 51 AEAIAVVADVSDPK------AVEAVFAEALEEFGRLHGVAHFAGVAHSALSWNLPLEAWEKVLRVNLTGSFLVARKAGEV 124 (241)
T ss_dssp SSEEEEECCTTSHH------HHHHHHHHHHHHHSCCCEEEEGGGGTTTTC----CHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecCCCHH------HHHHHHHHHHHHhCCccEeccccccccccchhhhhccccccccccccccccccccccccc
Confidence 67889999999654 354443 3589999999875321 234568899999999999988653
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
..-..++++||.+..+. | ....|+.+|+.-+.+.+..+
T Consensus 125 ~~~~~~i~~~ss~a~~~~----------------------------------~------~~~~Y~~sK~al~~lt~~lA~ 164 (241)
T d2a4ka1 125 LEEGGSLVLTGSVAGLGA----------------------------------F------GLAHYAAGKLGVVGLARTLAL 164 (241)
T ss_dssp CCTTCEEEEECCCTTCCH----------------------------------H------HHHHHHHCSSHHHHHHHHHHH
T ss_pred cccccceeeccccccccc----------------------------------c------CccccchhhHHHHHHHHHHHH
Confidence 23344555555433210 0 01359999999999998876
Q ss_pred ----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhcc
Q psy5825 421 ----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALD 496 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~ 496 (596)
.|+.+..+-||.|-.+.. ..+ +...+..+.. . .|. --+...+|+|++++.++-.....
T Consensus 165 el~~~gIrvN~I~PG~v~T~~~-------~~~--~~~~~~~~~~-~---~p~-----~r~~~p~dva~~v~fL~S~~s~~ 226 (241)
T d2a4ka1 165 ELARKGVRVNVLLPGLIQTPMT-------AGL--PPWAWEQEVG-A---SPL-----GRAGRPEEVAQAALFLLSEESAY 226 (241)
T ss_dssp HHTTTTCEEEEEEECSBCCGGG-------TTS--CHHHHHHHHH-T---STT-----CSCBCHHHHHHHHHHHHSGGGTT
T ss_pred HHhHhCCEEeeeccCcCCCHHH-------Hhh--hHhHHHHHHh-C---CCC-----CCCcCHHHHHHHHHHHhcchhCC
Confidence 789999999999843321 111 1222222222 1 111 12557899999999998543321
Q ss_pred CCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 497 HGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 497 ~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
-.|+++.+.+|
T Consensus 227 ----------------itG~~i~vDGG 237 (241)
T d2a4ka1 227 ----------------ITGQALYVDGG 237 (241)
T ss_dssp ----------------CCSCEEEESTT
T ss_pred ----------------CcCceEEeCCC
Confidence 36888888877
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.24 E-value=4.3e-06 Score=82.06 Aligned_cols=114 Identities=12% Similarity=0.161 Sum_probs=85.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhc-----cccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-c-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQH-----HIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR-C- 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~-----~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~-~- 342 (596)
.++.++.+|++++. ++..++. .+|++||+|+...+. ..+...+++|+.|+.++++++.. +
T Consensus 57 ~~~~~~~~Dv~~~~------~~~~~~~~~~~g~idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~ 130 (285)
T d1jtva_ 57 GSLETLQLDVRDSK------SVAAARERVTEGRVDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMK 130 (285)
T ss_dssp TSEEEEECCTTCHH------HHHHHHHTCTTSCCSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred CceEEEeccccchH------hhhhhhhhccccchhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHH
Confidence 57999999999754 4555543 489999999875422 23456889999999999998754 1
Q ss_pred -CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-
Q psy5825 343 -SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL- 420 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~- 420 (596)
.+-.++|++||++...... ....|+.||+.-+.+....+
T Consensus 131 ~~~~G~Iv~isS~~g~~~~~---------------------------------------~~~~Y~asKaal~~l~~~la~ 171 (285)
T d1jtva_ 131 RRGSGRVLVTGSVGGLMGLP---------------------------------------FNDVYCASKFALEGLCESLAV 171 (285)
T ss_dssp HHTCEEEEEEEEGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHH
T ss_pred HcCCCceEEEechhhcCCCC---------------------------------------CchHHHHHHHHHHHHHHHHHH
Confidence 3457899999987643210 22469999999998887765
Q ss_pred ----cCCCEEEecCCcccc
Q psy5825 421 ----YKLPLAMVRPSIVVS 435 (596)
Q Consensus 421 ----~gl~~~IlRp~~V~G 435 (596)
.|+.++++.||.|--
T Consensus 172 El~~~gIrVn~V~PG~v~T 190 (285)
T d1jtva_ 172 LLLPFGVHLSLIECGPVHT 190 (285)
T ss_dssp HHGGGTEEEEEEEECCBCC
T ss_pred HhhccCcEEEEEecCCCCC
Confidence 789999999999843
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.22 E-value=3.6e-06 Score=80.66 Aligned_cols=112 Identities=16% Similarity=0.131 Sum_probs=81.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. .+..++ ..+|++||+|+...+. ..++.++++|+.|+.++++++..
T Consensus 56 ~~~~~~~~Dvs~~~------~v~~~~~~i~~~~g~idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 129 (244)
T d1yb1a_ 56 AKVHTFVVDCSNRE------DIYSSAKKVKAEIGDVSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPA 129 (244)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHTCCCSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CcEEEEEeeCCCHH------HHHHHHHHHHHHcCCCceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhh
Confidence 67999999999764 244433 3589999999986422 23456899999999999988754
Q ss_pred --cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHH
Q psy5825 342 --CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKY 419 (596)
Q Consensus 342 --~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~ 419 (596)
..+-.+||++||.+...... ....|+.||++-..+....
T Consensus 130 m~~~~~G~Iv~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~~~~~L 170 (244)
T d1yb1a_ 130 MTKNNHGHIVTVASAAGHVSVP---------------------------------------FLLAYCSSKFAAVGFHKTL 170 (244)
T ss_dssp HHHTTCEEEEEECCCC-CCCHH---------------------------------------HHHHHHHHHHHHHHHHHHH
T ss_pred HHhcCCceEEEeecchhcCCCC---------------------------------------CcHHHHHHHHHHHHHHHHH
Confidence 13456899999988653210 1135999999988877665
Q ss_pred h--------cCCCEEEecCCcc
Q psy5825 420 L--------YKLPLAMVRPSIV 433 (596)
Q Consensus 420 ~--------~gl~~~IlRp~~V 433 (596)
+ .|+.++++.||.|
T Consensus 171 a~El~~~~~~gI~V~~i~PG~v 192 (244)
T d1yb1a_ 171 TDELAALQITGVKTTCLCPNFV 192 (244)
T ss_dssp HHHHHHTTCTTEEEEEEEETHH
T ss_pred HHHHHhhcCCCEEEEEEEcCCC
Confidence 4 3788999999988
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=98.19 E-value=5.7e-05 Score=72.69 Aligned_cols=174 Identities=12% Similarity=0.026 Sum_probs=109.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|++++. ++..++ ..+|++||+|+..... ..++..+++|+.|+.++++++..
T Consensus 59 ~~~~~~~~Dv~~~~------~v~~~~~~~~~~~g~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~ 132 (260)
T d1h5qa_ 59 VKTKAYQCDVSNTD------IVTKTIQQIDADLGPISGLIANAGVSVVKPATELTHEDFAFVYDVNVFGVFNTCRAVAKL 132 (260)
T ss_dssp CCEEEEECCTTCHH------HHHHHHHHHHHHSCSEEEEEECCCCCCCSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred CceEEEEccCCCHH------HHHHHHHHHHHHhCCCcEecccccccccCCHHHhccccccccccccccchhhhhhhhccc
Confidence 57899999999754 354444 3589999999875321 24566889999999988887653
Q ss_pred ---cCCCceEEEecCcccccCCc-cccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYRE-DIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~-~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
......++.+|+........ .+. + .. ....|+.||+.-+.+.+
T Consensus 133 m~~~~~~g~i~~~~s~~~~~~~~~~~~-----------------------------~---~~-~~~~Y~asKaal~~lt~ 179 (260)
T d1h5qa_ 133 WLQKQQKGSIVVTSSMSSQIINQSSLN-----------------------------G---SL-TQVFYNSSKAACSNLVK 179 (260)
T ss_dssp HHHHTCCEEEEEECCGGGTSCCEEETT-----------------------------E---EC-SCHHHHHHHHHHHHHHH
T ss_pred ccccccceEEEEeeccccccccccccc-----------------------------c---Cc-cccchhhhhhhHHHHHH
Confidence 13445666666665543211 000 0 00 22469999999999887
Q ss_pred HHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 418 KYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 418 ~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
..+ .|+.+..+-||.|-.+.. .+ ....+...+.. . +|. . -+.-.+|+|++++.++-.
T Consensus 180 ~lA~el~~~gIrvN~I~PG~i~T~~~----~~-----~~~~~~~~~~~-~---~pl---~--R~g~pedvA~~v~fL~S~ 241 (260)
T d1h5qa_ 180 GLAAEWASAGIRVNALSPGYVNTDQT----AH-----MDKKIRDHQAS-N---IPL---N--RFAQPEEMTGQAILLLSD 241 (260)
T ss_dssp HHHHHHGGGTEEEEEEEECSBCCGGG----GG-----SCHHHHHHHHH-T---CTT---S--SCBCGGGGHHHHHHHHSG
T ss_pred HHHHHhchhCeEEeecCCCcccCcch----hc-----cCHHHHHHHHh-c---CCC---C--CCcCHHHHHHHHHHHhcc
Confidence 765 789999999999854321 11 11222222221 1 111 1 144567899999888744
Q ss_pred hhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 493 TALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 493 ~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.... -.|+++.+.+|
T Consensus 242 ~s~~----------------itG~~i~VDGG 256 (260)
T d1h5qa_ 242 HATY----------------MTGGEYFIDGG 256 (260)
T ss_dssp GGTT----------------CCSCEEEECTT
T ss_pred hhCC----------------CcCceEEECCC
Confidence 3321 36889999887
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=98.16 E-value=1.9e-05 Score=75.51 Aligned_cols=142 Identities=14% Similarity=0.151 Sum_probs=91.6
Q ss_pred CeEEEEeCCCCcccHHHHHHHHhhhhhHHHhhhhhhhhhcCcEEEEEeccCCCCCCCCHHH-HHHH---h--ccccEEEE
Q psy5825 237 GGIYILLRSKKNKTVQERLAEQFKDELFDRLKNEQADILQRKVHIISGDISQPSLGISSHD-QQFI---Q--HHIHVIIH 310 (596)
Q Consensus 237 ~~V~~LvR~~~~~~~~~Rl~~~~~~~~~~~l~~~~~~~~~~rv~~v~GDl~~~~lGL~~~~-~~~l---~--~~vd~ViH 310 (596)
.+|++..|..... +.+.++.. .. .++.++.+|++++.. ... +..+ . ..+|++||
T Consensus 30 ~~V~~~~r~~~~~---~~~~~~~~-------------~~-~~~~~~~~Dvs~~~~---v~~~~~~i~~~~~~~~iDiLvn 89 (248)
T d1snya_ 30 QHLFTTCRNREQA---KELEDLAK-------------NH-SNIHILEIDLRNFDA---YDKLVADIEGVTKDQGLNVLFN 89 (248)
T ss_dssp SEEEEEESCTTSC---HHHHHHHH-------------HC-TTEEEEECCTTCGGG---HHHHHHHHHHHHGGGCCSEEEE
T ss_pred CEEEEEECCHHHH---HHHHHHHh-------------cC-CcEEEEEEEeccHHH---HHHHHhhhHHHhhcCCcceEEe
Confidence 5899999975432 12333221 11 689999999998753 111 1221 1 34899999
Q ss_pred cCccCChh--------hhHHHHHHHHHHHHHHHHHHHHhc--------------CCCceEEEecCcccccCCcccccccc
Q psy5825 311 AAASLRFD--------ELIQDAFTLNIQATRELLDLATRC--------------SQLKAILHVSTLYTHSYREDIQEEFY 368 (596)
Q Consensus 311 ~AA~v~~~--------~~~~~~~~~NV~GT~~LL~~a~~~--------------~~vkrfV~vSS~~v~g~~~~i~E~~~ 368 (596)
+||..... ..+...+++|+.|+..+++++... .+..++|++||....-...
T Consensus 90 NAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~p~l~~~~~~~~~~~~~~~~g~ii~i~S~~g~~~~~------- 162 (248)
T d1snya_ 90 NAGIAPKSARITAVRSQELLDTLQTNTVVPIMLAKACLPLLKKAAKANESQPMGVGRAAIINMSSILGSIQGN------- 162 (248)
T ss_dssp CCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHTTTSCSSTTTCEEEEECCGGGCSTTC-------
T ss_pred eccccccCcccccCCHHHHHHHHHhccccHHHHHHHHHHHHHHhhhccccccccccccccccccccccccCCC-------
Confidence 99974321 124568899999999998877531 1346789999865321100
Q ss_pred CCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccc
Q psy5825 369 PPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVV 434 (596)
Q Consensus 369 ~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~ 434 (596)
+ .. ....|+.||++-..+....+ .|+.+..+.||.|-
T Consensus 163 ~----------------------------~~-~~~~Y~aSKaal~~lt~~la~e~~~~gI~vn~v~PG~v~ 204 (248)
T d1snya_ 163 T----------------------------DG-GMYAYRTSKSALNAATKSLSVDLYPQRIMCVSLHPGWVK 204 (248)
T ss_dssp C----------------------------SC-CCHHHHHHHHHHHHHHHHHHHHHGGGTCEEEEECCCSBC
T ss_pred C----------------------------CC-ChHHHHHHHHHHHHHHHHHHHHhCCCCeEEEEcCCCccc
Confidence 0 00 12369999999998887654 78999999999883
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.15 E-value=1.5e-05 Score=76.26 Aligned_cols=178 Identities=10% Similarity=-0.002 Sum_probs=109.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHhccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh---cCCCc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQHHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR---CSQLK 346 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~---~~~vk 346 (596)
..+.+...|+..... .+.+...+..+|++||+|+..... ..+...+++|+.|+..+++++.. ..+..
T Consensus 50 ~~~~~~~~d~~~~~~---~~~~~~~~~~id~lVn~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~~~g 126 (245)
T d2ag5a1 50 PGIQTRVLDVTKKKQ---IDQFANEVERLDVLFNVAGFVHHGTVLDCEEKDWDFSMNLNVRSMYLMIKAFLPKMLAQKSG 126 (245)
T ss_dssp TTEEEEECCTTCHHH---HHHHHHHCSCCSEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCE
T ss_pred cCCceeeeecccccc---ccccccccccceeEEecccccCCCChhhCCHHHHHHHHHHhhccchhHHHhhCcccccCCCc
Confidence 456777777764321 111222335789999999986432 24566889999999999988764 12446
Q ss_pred eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----c
Q psy5825 347 AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----Y 421 (596)
Q Consensus 347 rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~ 421 (596)
++|++||....-. . + . ....|+.+|+.-+.+++.++ +
T Consensus 127 ~Ii~isS~~~~~~-~------~------------------------------~-~~~~Y~~sKaal~~l~r~lA~e~~~~ 168 (245)
T d2ag5a1 127 NIINMSSVASSVK-G------V------------------------------V-NRCVYSTTKAAVIGLTKSVAADFIQQ 168 (245)
T ss_dssp EEEEECCSBTTTB-C------C------------------------------T-TBHHHHHHHHHHHHHHHHHHHHHGGG
T ss_pred eeeeeechhhccC-C------c------------------------------c-chhHHHHHHHHHHHHHHHHHHHhhhh
Confidence 8999998653110 0 0 0 22469999999999998866 7
Q ss_pred CCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCC
Q psy5825 422 KLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVA 501 (596)
Q Consensus 422 gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~ 501 (596)
|+.+..+.||.|-.+.... +.........+...+.. ..| .--+.-.+|+|++++.++-.....
T Consensus 169 gIrvN~I~PG~i~T~~~~~---~~~~~~~~~~~~~~~~~----~~p-----l~R~~~pedva~~v~fL~s~~s~~----- 231 (245)
T d2ag5a1 169 GIRCNCVCPGTVDTPSLQE---RIQARGNPEEARNDFLK----RQK-----TGRFATAEEIAMLCVYLASDESAY----- 231 (245)
T ss_dssp TEEEEEEEESCEECHHHHH---HHHHSSSHHHHHHHHHH----TCT-----TSSCEEHHHHHHHHHHHHSGGGTT-----
T ss_pred CcEEEEEeeceeechhhHh---hhhhhhhhHHHHHHHHh----cCC-----CCCCcCHHHHHHHHHHHhChhhCC-----
Confidence 8999999999985432100 00000001111111111 011 112556799999999988643321
Q ss_pred CCCCcCCCCCCCCCCeEEccCC
Q psy5825 502 PPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 502 ~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..|+++.|.+|
T Consensus 232 -----------iTG~~i~VDGG 242 (245)
T d2ag5a1 232 -----------VTGNPVIIDGG 242 (245)
T ss_dssp -----------CCSCEEEECTT
T ss_pred -----------CcCceEEeCCC
Confidence 36889999887
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=98.13 E-value=2.7e-05 Score=74.71 Aligned_cols=156 Identities=10% Similarity=0.020 Sum_probs=99.4
Q ss_pred ccccEEEEcCccCC----hh----hhHHHHHHHHHHHHHHHHHHHHhc---CCCceEEEecCcccccCCccccccccCCC
Q psy5825 303 HHIHVIIHAAASLR----FD----ELIQDAFTLNIQATRELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPL 371 (596)
Q Consensus 303 ~~vd~ViH~AA~v~----~~----~~~~~~~~~NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~ 371 (596)
..+|++||+|+... +. ..+...+++|+.|+.++++++... .+-.++|++||.+.+....
T Consensus 70 G~iDiLVnNAg~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~~~~~---------- 139 (252)
T d1zmta1 70 GQVDVLVSNDIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPFGPWK---------- 139 (252)
T ss_dssp SCCCEEEEECCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTTSCCT----------
T ss_pred CCCCEEEECCcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccccccc----------
Confidence 46899999998642 11 235568899999999998887531 2446899999987654211
Q ss_pred CChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCC
Q psy5825 372 FSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSN 446 (596)
Q Consensus 372 ~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~ 446 (596)
....|+.||..-+.+.+..+ +|+++..+-||.|-.+........ .
T Consensus 140 -----------------------------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~I~PG~i~T~~~~~~~~~-~ 189 (252)
T d1zmta1 140 -----------------------------ELSTYTSARAGACTLANALSKELGEYNIPVFAIGPNYLHSEDSPYFYPT-E 189 (252)
T ss_dssp -----------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTCCEEEEEESSBCCBTCCSSCBH-H
T ss_pred -----------------------------cccccccccccHHHHHHHHHHHhcccCcEEEEEecCCCcCcchhhhhhc-c
Confidence 12469999999999887765 789999999999966532111000 0
Q ss_pred CCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 447 NLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 447 ~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
........+..+.. . +|. . -+...+|+|++++.++-..... ..|+++++.+|
T Consensus 190 ~~~~~~e~~~~~~~-~---~pl---~--R~g~pedvA~~v~fL~S~~s~~----------------iTG~~i~vdGG 241 (252)
T d1zmta1 190 PWKTNPEHVAHVKK-V---TAL---Q--RLGTQKELGELVAFLASGSCDY----------------LTGQVFWLAGG 241 (252)
T ss_dssp HHTTCHHHHHHHHH-H---SSS---S--SCBCHHHHHHHHHHHHTTSCGG----------------GTTCEEEESTT
T ss_pred cccCCHHHHHHHHh-c---CCC---C--CCcCHHHHHHHHHHHhCchhcC----------------CcCCeEEECCC
Confidence 00000111111111 1 111 1 2567889999999988543321 36889999887
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.13 E-value=2.7e-05 Score=74.96 Aligned_cols=116 Identities=17% Similarity=0.137 Sum_probs=81.7
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+||+++. ++..++ ..+|++||+|+.... ...+...+.+|+.|+.++...+..
T Consensus 61 ~~~~~~~~Dls~~~------~v~~~v~~~~~~~g~iD~lVnnAg~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~ 134 (257)
T d1xg5a_ 61 GTLIPYRCDLSNEE------DILSMFSAIRSQHSGVDICINNAGLARPDTLLSGSTSGWKDMFNVNVLALSICTREAYQS 134 (257)
T ss_dssp SEEEEEECCTTCHH------HHHHHHHHHHHHHCCCSEEEECCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred ceEEEEEccCCCHH------HHHHHHHHHHHhcCCCCEEEecccccCCCccccccHHHHHhhhhhhhhHHHHHHHHHHHH
Confidence 47899999999653 344443 358999999997532 234566889999999888777643
Q ss_pred ---c-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHH
Q psy5825 342 ---C-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVE 417 (596)
Q Consensus 342 ---~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~ 417 (596)
. ..-.++|++||++.+...+. . ....|+.+|+....+.+
T Consensus 135 ~~~~~~~~g~Ii~isS~~~~~~~p~------------------------------------~-~~~~Y~~sKaal~~ltr 177 (257)
T d1xg5a_ 135 MKERNVDDGHIININSMSGHRVLPL------------------------------------S-VTHFYSATKYAVTALTE 177 (257)
T ss_dssp HHHTTCCSCEEEEECCGGGTSCCSC------------------------------------G-GGHHHHHHHHHHHHHHH
T ss_pred HHHhccCCCceEEEechHhcCCCCC------------------------------------c-ccHHHHHHHHHHHhCHH
Confidence 1 12468999999876432110 0 11359999999998886
Q ss_pred HHh-------cCCCEEEecCCcccc
Q psy5825 418 KYL-------YKLPLAMVRPSIVVS 435 (596)
Q Consensus 418 ~~~-------~gl~~~IlRp~~V~G 435 (596)
.++ .++.+..+-||.|-.
T Consensus 178 ~la~el~~~~~~I~vn~i~PG~i~t 202 (257)
T d1xg5a_ 178 GLRQELREAQTHIRATCISPGVVET 202 (257)
T ss_dssp HHHHHHHHTTCCCEEEEEEESCBCS
T ss_pred HHHHHHHhCCCCEEEEEEeCCCCCC
Confidence 443 678999999988743
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=98.06 E-value=2.3e-05 Score=74.22 Aligned_cols=126 Identities=9% Similarity=-0.003 Sum_probs=83.7
Q ss_pred cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEecCcccccCCccccccccCCCCCh
Q psy5825 304 HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLATR-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSY 374 (596)
Q Consensus 304 ~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a~~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~ 374 (596)
.+|+|||+||...+ ...++.++.+|+.|+..++.++.. +..-.++|++||.+.+....
T Consensus 71 ~iD~linnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~~~~~------------- 137 (235)
T d1ooea_ 71 QVDGVFCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAMGPTP------------- 137 (235)
T ss_dssp CEEEEEECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-------------
T ss_pred CeeEEEECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhcCCcc-------------
Confidence 48999999986321 123445789999999999988875 22235899999987643211
Q ss_pred HHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-------cCCCEEEecCCccccCCCCCccccCCC
Q psy5825 375 EDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-------YKLPLAMVRPSIVVSTWKEPIVGWSNN 447 (596)
Q Consensus 375 ~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-------~gl~~~IlRp~~V~G~~~~p~~G~~~~ 447 (596)
....|+.||++.+.+....+ .++.+..+.||.|--
T Consensus 138 --------------------------~~~~Y~asKaal~~l~~~la~e~~~~~~~i~v~~i~Pg~~~T------------ 179 (235)
T d1ooea_ 138 --------------------------SMIGYGMAKAAVHHLTSSLAAKDSGLPDNSAVLTIMPVTLDT------------ 179 (235)
T ss_dssp --------------------------TBHHHHHHHHHHHHHHHHHHSTTSSCCTTCEEEEEEESCBCC------------
T ss_pred --------------------------cccchHHHHHHHHHHHHHHHHHhccCCCceEEEEEecCcCcC------------
Confidence 12469999999999998876 244566677776621
Q ss_pred CCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhh
Q psy5825 448 LYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTA 494 (596)
Q Consensus 448 ~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~ 494 (596)
.++.... + ......|++.+++++.++..+....
T Consensus 180 -----~~~~~~~-------~--~~~~~~~~~~~~va~~~~~~l~~~~ 212 (235)
T d1ooea_ 180 -----PMNRKWM-------P--NADHSSWTPLSFISEHLLKWTTETS 212 (235)
T ss_dssp -----HHHHHHS-------T--TCCGGGCBCHHHHHHHHHHHHHCGG
T ss_pred -----cchhhhC-------c--CCccccCCCHHHHHHHHHHHhcCcc
Confidence 2222211 1 1223468899999999876665443
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=98.01 E-value=0.00022 Score=69.47 Aligned_cols=171 Identities=16% Similarity=0.117 Sum_probs=105.5
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH-------hccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHh-
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI-------QHHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATR- 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l-------~~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~- 341 (596)
.++.++.+|+++.. .+..+ ...+|++||+|+..... ..+...+.+|+.+...++..+..
T Consensus 75 ~~~~~~~~D~~~~~------~v~~~~~~~~~~~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~ 148 (294)
T d1w6ua_ 75 NKVHAIQCDVRDPD------MVQNTVSELIKVAGHPNIVINNAAGNFISPTERLSPNAWKTITDIVLNGTAFVTLEIGKQ 148 (294)
T ss_dssp SCEEEEECCTTCHH------HHHHHHHHHHHHTCSCSEEEECCCCCCCSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CceEEEEecccChH------HHHHHhhhhhhhccccchhhhhhhhccccccccchhhhhhhheeeecccchhhhhhhhcc
Confidence 67889999999654 23333 24689999999975432 23445778888887777655432
Q ss_pred ---cCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 342 ---CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 342 ---~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
......++.+|+.+...... ....|+.+|.+-+.+++.
T Consensus 149 ~~~~~~~~~i~~~ss~~~~~~~~---------------------------------------~~~~YsasKaal~~ltk~ 189 (294)
T d1w6ua_ 149 LIKAQKGAAFLSITTIYAETGSG---------------------------------------FVVPSASAKAGVEAMSKS 189 (294)
T ss_dssp HHHTTCCEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHH
T ss_pred cccccccccccccccchhhhccc---------------------------------------ccchHHHHHHHHHHHHHH
Confidence 23445667777665432100 224699999999999987
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
.+ .|+++..+-||.|-.+.... ...........+.. . +|. --+...+|+|++++.++...
T Consensus 190 lA~ela~~gIrVN~I~PG~i~T~~~~~------~~~~~~~~~~~~~~-~---~pl-----~R~~~pediA~~v~fL~sd~ 254 (294)
T d1w6ua_ 190 LAAEWGKYGMRFNVIQPGPIKTKGAFS------RLDPTGTFEKEMIG-R---IPC-----GRLGTVEELANLAAFLCSDY 254 (294)
T ss_dssp HHHHHGGGTEEEEEEEECCBCC------------CCTTSHHHHHHHT-T---CTT-----SSCBCHHHHHHHHHHHTSGG
T ss_pred HHHHHhHhCeEEEEEccCccccchhhh------ccCCcHHHHHHHhh-c---CCC-----CCCCCHHHHHHHHHHHhCch
Confidence 65 78999999999996543211 11111112222221 1 121 12456799999999888543
Q ss_pred hccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 494 ALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 494 ~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
... -.|++.++.+|
T Consensus 255 s~~----------------itG~~i~vDGG 268 (294)
T d1w6ua_ 255 ASW----------------INGAVIKFDGG 268 (294)
T ss_dssp GTT----------------CCSCEEEESTT
T ss_pred hcC----------------CCCcEEEECCC
Confidence 321 36899999887
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=98.00 E-value=4.6e-05 Score=72.84 Aligned_cols=119 Identities=13% Similarity=0.101 Sum_probs=77.1
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------c--cccEEEEcCccCCh--------hhhHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------H--HIHVIIHAAASLRF--------DELIQDAFTLNIQATRELLDLA 339 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~--~vd~ViH~AA~v~~--------~~~~~~~~~~NV~GT~~LL~~a 339 (596)
.++.++.+|+++.. .++.++ . .+|++||+||.... ...+...+++|+.|+..|++++
T Consensus 51 ~~~~~~~~Dvs~~~------~v~~~~~~i~~~~~~~~idilinnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~ 124 (250)
T d1yo6a1 51 SRVHVLPLTVTCDK------SLDTFVSKVGEIVGSDGLSLLINNAGVLLSYGTNTEPNRAVIAEQLDVNTTSVVLLTQKL 124 (250)
T ss_dssp TTEEEEECCTTCHH------HHHHHHHHHHHHHGGGCCCEEEECCCCCCCBCTTSCCCHHHHHHHHHHHTHHHHHHHHHT
T ss_pred CceEEEEEecCCHH------HHHHHHHHHHHHhCCCCeEEEEEcCcccCCCCccccCCHHHHHHHHHHHhhhHHHHHHHH
Confidence 68999999999653 233332 2 38999999996421 1235568999999999998887
Q ss_pred Hhc------C--------CCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchH
Q psy5825 340 TRC------S--------QLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSY 405 (596)
Q Consensus 340 ~~~------~--------~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y 405 (596)
... . ....+|.+|+...+..... .. .......+|
T Consensus 125 ~p~l~~~~~~~~~~~~~~~~~~~i~~s~~~~~~~~~~-~~-------------------------------~~~~~~~aY 172 (250)
T d1yo6a1 125 LPLLKNAASKESGDQLSVSRAAVITISSGLGSITDNT-SG-------------------------------SAQFPVLAY 172 (250)
T ss_dssp HHHHHHHHHSSCSSCCCTTTCEEEEECCGGGCSTTCC-ST-------------------------------TSSSCBHHH
T ss_pred HHHHHHhccCCCCccccceeccccccccccccccCCc-cc-------------------------------ccchhHHHH
Confidence 531 1 1235666666544321110 00 000012359
Q ss_pred HHHHHHHHHHHHHHh-----cCCCEEEecCCcc
Q psy5825 406 SFTKAIGESVVEKYL-----YKLPLAMVRPSIV 433 (596)
Q Consensus 406 ~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V 433 (596)
+.||++...+.+.++ .|+.+..+-||.|
T Consensus 173 ~aSKaal~~l~~~la~el~~~gI~v~~i~PG~v 205 (250)
T d1yo6a1 173 RMSKAAINMFGRTLAVDLKDDNVLVVNFCPGWV 205 (250)
T ss_dssp HHHHHHHHHHHHHHHHHTGGGTCEEEEEECCCC
T ss_pred HHHHHHHHHHHHHHHHHhcccCeEEEEEecCCC
Confidence 999999998887765 7899999998877
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.93 E-value=9.9e-06 Score=80.04 Aligned_cols=113 Identities=11% Similarity=0.002 Sum_probs=78.4
Q ss_pred EEEEeccCCCCCCCCHHHHHHHh---ccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc---CCCc
Q psy5825 280 HIISGDISQPSLGISSHDQQFIQ---HHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC---SQLK 346 (596)
Q Consensus 280 ~~v~GDl~~~~lGL~~~~~~~l~---~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~---~~vk 346 (596)
..+.+|+.+... ....+..+. ..+|++||+||..... ..++..+++|+.|+.++++++... .+-.
T Consensus 65 ~~~~~d~~~~~~--~~~~v~~~~~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G 142 (302)
T d1gz6a_ 65 GKAVANYDSVEA--GEKLVKTALDTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYG 142 (302)
T ss_dssp CEEEEECCCGGG--HHHHHHHHHHHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred cccccccchHHH--HHHHHHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCc
Confidence 345567765432 111223222 3689999999975421 245678999999999999987641 2446
Q ss_pred eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----c
Q psy5825 347 AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----Y 421 (596)
Q Consensus 347 rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~ 421 (596)
+||++||++.+.... ....|+.||+.-..+.+..+ .
T Consensus 143 ~IV~isS~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~la~E~~~~ 183 (302)
T d1gz6a_ 143 RIIMTASASGIYGNF---------------------------------------GQANYSAAKLGLLGLANTLVIEGRKN 183 (302)
T ss_dssp EEEEECCHHHHHCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHHTGGG
T ss_pred EEEEeCChhhcCCCC---------------------------------------CcHHHHHHHHHHHHHHHHHHHHHhcc
Confidence 999999987542100 12469999999999887765 7
Q ss_pred CCCEEEecCCcc
Q psy5825 422 KLPLAMVRPSIV 433 (596)
Q Consensus 422 gl~~~IlRp~~V 433 (596)
|+.+..+-||.+
T Consensus 184 gIrVN~I~PG~~ 195 (302)
T d1gz6a_ 184 NIHCNTIAPNAG 195 (302)
T ss_dssp TEEEEEEEEECC
T ss_pred CCceeeeCCCCC
Confidence 899999999876
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.91 E-value=4.7e-05 Score=72.12 Aligned_cols=125 Identities=9% Similarity=-0.002 Sum_probs=86.6
Q ss_pred cccEEEEcCccCC---h-----hhhHHHHHHHHHHHHHHHHHHHHh-cCCCceEEEecCcccccCCccccccccCCCCCh
Q psy5825 304 HIHVIIHAAASLR---F-----DELIQDAFTLNIQATRELLDLATR-CSQLKAILHVSTLYTHSYREDIQEEFYPPLFSY 374 (596)
Q Consensus 304 ~vd~ViH~AA~v~---~-----~~~~~~~~~~NV~GT~~LL~~a~~-~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~ 374 (596)
.+|++||+||... + ...++..+++|+.|+.+++.++.. +..-.++|++||.+......
T Consensus 71 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~~~~~------------- 137 (236)
T d1dhra_ 71 KVDAILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAALDGTP------------- 137 (236)
T ss_dssp CEEEEEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGGSCCT-------------
T ss_pred CceEEEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHcCCcc-------------
Confidence 4899999998532 1 123455789999999999998875 23346899999987643211
Q ss_pred HHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-------cCCCEEEecCCccccCCCCCccccCCC
Q psy5825 375 EDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-------YKLPLAMVRPSIVVSTWKEPIVGWSNN 447 (596)
Q Consensus 375 ~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-------~gl~~~IlRp~~V~G~~~~p~~G~~~~ 447 (596)
....|+.||+.-+.+.+..+ .|+.+..+.||.|.-+
T Consensus 138 --------------------------~~~~Y~asKaal~~lt~~la~El~~~~~gI~vn~v~PG~v~T~----------- 180 (236)
T d1dhra_ 138 --------------------------GMIGYGMAKGAVHQLCQSLAGKNSGMPSGAAAIAVLPVTLDTP----------- 180 (236)
T ss_dssp --------------------------TBHHHHHHHHHHHHHHHHHTSTTSSCCTTCEEEEEEESCEECH-----------
T ss_pred --------------------------CCcccHHHHHHHHHHHHHHHHHhccCCCcEEEEEEEeccCcCC-----------
Confidence 12469999999999999876 2688899998887332
Q ss_pred CCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhh
Q psy5825 448 LYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKT 493 (596)
Q Consensus 448 ~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~ 493 (596)
+..... + ....-.|++.+++|..++.++...
T Consensus 181 ------~~~~~~-------~--~~~~~~~~~pe~va~~~~~l~s~~ 211 (236)
T d1dhra_ 181 ------MNRKSM-------P--EADFSSWTPLEFLVETFHDWITGN 211 (236)
T ss_dssp ------HHHHHS-------T--TSCGGGSEEHHHHHHHHHHHHTTT
T ss_pred ------cchhhC-------c--cchhhcCCCHHHHHHHHHHHhCCC
Confidence 111111 1 112335788999999999887543
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=97.83 E-value=0.0001 Score=73.46 Aligned_cols=95 Identities=16% Similarity=0.174 Sum_probs=69.7
Q ss_pred hccccEEEEcCccCC-----hh----hhHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEecCcccccCCccccccccCCC
Q psy5825 302 QHHIHVIIHAAASLR-----FD----ELIQDAFTLNIQATRELLDLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPL 371 (596)
Q Consensus 302 ~~~vd~ViH~AA~v~-----~~----~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~ 371 (596)
+..+|++||+||... +. ..+...+.+|+.|+..+++.|... ..-.++|.+||.+......
T Consensus 111 ~G~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~k~~~~~m~~~GsIv~iss~~~~~~~p---------- 180 (329)
T d1uh5a_ 111 YGKINMLVHSLANAKEVQKDLLNTSRKGYLDALSKSSYSLISLCKYFVNIMKPQSSIISLTYHASQKVVP---------- 180 (329)
T ss_dssp HCCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT----------
T ss_pred hCCCCeeccccccccccCCChhhhhhhhhhhhcccchhHHHHHHHHHHhhcccccccccceeehhccccc----------
Confidence 357999999998643 21 245668899999999999988752 2335788898876543210
Q ss_pred CChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh------cCCCEEEecCCccc
Q psy5825 372 FSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL------YKLPLAMVRPSIVV 434 (596)
Q Consensus 372 ~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~------~gl~~~IlRp~~V~ 434 (596)
. +...|+.||..-+.+++..+ +|++|..+.||.|-
T Consensus 181 ---------------------------~-y~~~y~asKaal~~ltr~lA~Ela~~~gIRVNaI~PG~i~ 221 (329)
T d1uh5a_ 181 ---------------------------G-YGGGMSSAKAALESDTRVLAYHLGRNYNIRINTISAGPLK 221 (329)
T ss_dssp ---------------------------T-CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCC
T ss_pred ---------------------------c-cchhhhhhhccccccchhhHHHHhcccCcEEEEEecCccc
Confidence 0 33469999999999988765 48999999999873
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.80 E-value=6.2e-05 Score=72.96 Aligned_cols=75 Identities=12% Similarity=0.080 Sum_probs=54.8
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh-------ccccEEEEcCccCCh-------hhhHHHHHHHHHHHHHHHHHHHHhc
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ-------HHIHVIIHAAASLRF-------DELIQDAFTLNIQATRELLDLATRC 342 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~-------~~vd~ViH~AA~v~~-------~~~~~~~~~~NV~GT~~LL~~a~~~ 342 (596)
.++.++.+||++.. .+..++ ..+|++||+||.... ...+...+++|+.|+..+++++...
T Consensus 53 ~~~~~~~~Dvs~~~------sv~~~~~~~~~~~g~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~ 126 (275)
T d1wmaa1 53 LSPRFHQLDIDDLQ------SIRALRDFLRKEYGGLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPL 126 (275)
T ss_dssp CCCEEEECCTTCHH------HHHHHHHHHHHHHSSEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGG
T ss_pred CcEEEEEEecCCHH------HHHHHHHHHHHhcCCcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 56889999999654 243332 368999999997532 2234568899999999999998752
Q ss_pred -CCCceEEEecCcccc
Q psy5825 343 -SQLKAILHVSTLYTH 357 (596)
Q Consensus 343 -~~vkrfV~vSS~~v~ 357 (596)
..-.++|++||++..
T Consensus 127 m~~~g~ivnisS~~~~ 142 (275)
T d1wmaa1 127 IKPQGRVVNVSSIMSV 142 (275)
T ss_dssp EEEEEEEEEECCHHHH
T ss_pred HHhcCCccccccccee
Confidence 223589999997653
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=97.78 E-value=0.00066 Score=64.50 Aligned_cols=174 Identities=9% Similarity=-0.043 Sum_probs=106.3
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHHh---ccccEEEEcCccCChhh------------hHHHHHHHHHHHHHHHHHHHHh
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFIQ---HHIHVIIHAAASLRFDE------------LIQDAFTLNIQATRELLDLATR 341 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l~---~~vd~ViH~AA~v~~~~------------~~~~~~~~NV~GT~~LL~~a~~ 341 (596)
.+..++.+|+.+... ....+..+. ...|++||+|+...... .......+|+.+...++..+..
T Consensus 55 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~d~~v~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (258)
T d1qsga_ 55 GSDIVLQCDVAEDAS--IDTMFAELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRS 132 (258)
T ss_dssp TCCCEEECCTTCHHH--HHHHHHHHHTTCSSEEEEEECCCCCCGGGGSSCHHHHCCHHHHHHHHHHHTHHHHHHHHHHGG
T ss_pred CCcceeecccchHHH--HHHHHHHhhhcccccceEEEeecccccccccccccccchHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456677788775331 001111222 34799999998754221 1233567788888888888765
Q ss_pred c-CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh
Q psy5825 342 C-SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL 420 (596)
Q Consensus 342 ~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~ 420 (596)
. ..-..+|++||++...... ....|+.||.+-+.+++..+
T Consensus 133 ~~~~~~~Ii~iss~~~~~~~~---------------------------------------~~~~Y~~sKaal~~ltr~lA 173 (258)
T d1qsga_ 133 MLNPGSALLTLSYLGAERAIP---------------------------------------NYNVMGLAKASLEANVRYMA 173 (258)
T ss_dssp GEEEEEEEEEEECGGGTSBCT---------------------------------------TTTHHHHHHHHHHHHHHHHH
T ss_pred hccCCcEEEEecchhhccCCC---------------------------------------CcHHHHHHHHHHHHHHHHHH
Confidence 2 2335688888876532100 12469999999999998776
Q ss_pred -----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhc
Q psy5825 421 -----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTAL 495 (596)
Q Consensus 421 -----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~ 495 (596)
+|+++..+.||.|..+... + ... ........... .|. --+...+|+|++++.++.....
T Consensus 174 ~el~~~gIrVN~I~PG~i~T~~~~----~---~~~-~~~~~~~~~~~---~pl-----~R~~~peeia~~v~fL~s~~s~ 237 (258)
T d1qsga_ 174 NAMGPEGVRVNAISAGPIRTLAAS----G---IKD-FRKMLAHCEAV---TPI-----RRTVTIEDVGNSAAFLCSDLSA 237 (258)
T ss_dssp HHHTTTTEEEEEEEECCCCCTTGG----G---STT-HHHHHHHHHHH---STT-----SSCCCHHHHHHHHHHHTSGGGT
T ss_pred HHhCccCceeeccccccccccccc----c---cch-hhhHHHHHHhC---CCC-----CCCcCHHHHHHHHHHHhCchhc
Confidence 7899999999999655321 1 111 12222222211 121 1256689999999988854332
Q ss_pred cCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 496 DHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 496 ~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
. -.|+++.+.+|
T Consensus 238 ~----------------itG~~i~vDGG 249 (258)
T d1qsga_ 238 G----------------ISGEVVHVDGG 249 (258)
T ss_dssp T----------------CCSCEEEESTT
T ss_pred C----------------ccCceEEECcC
Confidence 1 46889998887
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.71 E-value=0.00024 Score=67.44 Aligned_cols=119 Identities=12% Similarity=0.083 Sum_probs=79.6
Q ss_pred CcEEEEEeccCCCCCCCCHHHH---HHHhccccEEEEcCccCCh-------------hhhHHHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQ---QFIQHHIHVIIHAAASLRF-------------DELIQDAFTLNIQATRELLDLAT 340 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~---~~l~~~vd~ViH~AA~v~~-------------~~~~~~~~~~NV~GT~~LL~~a~ 340 (596)
.....+..|+.+... ..... .......|.++++++.... ...+...+.+|+.|+.++..++.
T Consensus 51 ~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~ 128 (248)
T d2o23a1 51 NNCVFAPADVTSEKD--VQTALALAKGKFGRVDVAVNCAGIAVASKTYNLKKGQTHTLEDFQRVLDVNLMGTFNVIRLVA 128 (248)
T ss_dssp TTEEEEECCTTCHHH--HHHHHHHHHHHHSCCCEEEECCCCCCCCCSEETTTTEECCHHHHHHHHHHHTHHHHHHHHHHH
T ss_pred CCccccccccccccc--ccccccccccccccccccccccccccCCCcccccccccchHHHHHHHHhHHHHHHHHHHHHhH
Confidence 456777777775331 00111 1112346888888765421 12455688999999999999885
Q ss_pred hc---------CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHH
Q psy5825 341 RC---------SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAI 411 (596)
Q Consensus 341 ~~---------~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~ 411 (596)
.. .+..+||++||++.+.... ....|+.||+.
T Consensus 129 ~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~---------------------------------------~~~~Y~asKaa 169 (248)
T d2o23a1 129 GEMGQNEPDQGGQRGVIINTASVAAFEGQV---------------------------------------GQAAYSASKGG 169 (248)
T ss_dssp HHHTTSCCCTTSCCEEEEEECCTHHHHCCT---------------------------------------TCHHHHHHHHH
T ss_pred HHHHHhhhhccCCceEEEEecchhhccCCC---------------------------------------CchHHHHHHHH
Confidence 42 1224799999987643210 22469999999
Q ss_pred HHHHHHHHh-----cCCCEEEecCCccccC
Q psy5825 412 GESVVEKYL-----YKLPLAMVRPSIVVST 436 (596)
Q Consensus 412 aE~lv~~~~-----~gl~~~IlRp~~V~G~ 436 (596)
-+.+.+.++ .|+.+..+-||.|..+
T Consensus 170 l~~lt~~la~e~~~~gIrvN~I~PG~i~T~ 199 (248)
T d2o23a1 170 IVGMTLPIARDLAPIGIRVMTIAPGLFGTP 199 (248)
T ss_dssp HHHHHHHHHHHHGGGTEEEEEEEECCBCCC
T ss_pred HHHHHHHHHHHhcccCcceeeeccCceecc
Confidence 999998876 7899999999998543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=97.70 E-value=0.0018 Score=62.23 Aligned_cols=147 Identities=13% Similarity=0.027 Sum_probs=92.2
Q ss_pred ccccEEEEcCccCChh---------------------hhHHHHHHHHHHHHHHHHHHHHhc---------CCCceEEEec
Q psy5825 303 HHIHVIIHAAASLRFD---------------------ELIQDAFTLNIQATRELLDLATRC---------SQLKAILHVS 352 (596)
Q Consensus 303 ~~vd~ViH~AA~v~~~---------------------~~~~~~~~~NV~GT~~LL~~a~~~---------~~vkrfV~vS 352 (596)
..+|++||+||..... .....++.+|+.|+..+.+++... .+...+|+++
T Consensus 97 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~ii~~~ 176 (284)
T d1e7wa_ 97 GRCDVLVNNASSFYPTPLLRNDEDGHEPCVGDREAMETATADLFGSNAIAPYFLIKAFAHRVAGTPAKHRGTNYSIINMV 176 (284)
T ss_dssp SCCCEEEECCCCCCCCCCCC-------------HHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTSCGGGSCSCEEEEEEC
T ss_pred CCCCEEEecCCccCCCchhhCCHHHhhhhhhhHHHHHHHHHHHHhhheeeeeeeeccccchhhhhHHHhcCCCCcccccc
Confidence 4689999999975311 011236788999999888876531 1234677777
Q ss_pred CcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEE
Q psy5825 353 TLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAM 427 (596)
Q Consensus 353 S~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~I 427 (596)
+........ ....|+.||..-+.+.+..+ .|+.+..
T Consensus 177 s~~~~~~~~---------------------------------------~~~~Y~asKaal~~lt~~lA~el~~~gIrvN~ 217 (284)
T d1e7wa_ 177 DAMTNQPLL---------------------------------------GYTIYTMAKGALEGLTRSAALELAPLQIRVNG 217 (284)
T ss_dssp CTTTTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEE
T ss_pred cccccCCcc---------------------------------------ceeeeccccccchhhhHHHHHHhCCccccccc
Confidence 765432100 12469999999999988766 7899999
Q ss_pred ecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcC
Q psy5825 428 VRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLV 507 (596)
Q Consensus 428 lRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~ 507 (596)
+-||.+-... ..+..++..+... +|. .--+...+|+|++++.++-.....
T Consensus 218 I~PG~t~~~~-----------~~~~~~~~~~~~~----~pl----~~R~~~peeiA~~v~fL~S~~s~~----------- 267 (284)
T d1e7wa_ 218 VGPGLSVLVD-----------DMPPAVWEGHRSK----VPL----YQRDSSAAEVSDVVIFLCSSKAKY----------- 267 (284)
T ss_dssp EEESSBCCGG-----------GSCHHHHHHHHTT----CTT----TTSCBCHHHHHHHHHHHHSGGGTT-----------
T ss_pred cccccccccc-----------cCCHHHHHHHHhc----CCC----CCCCCCHHHHHHHHHHHhCchhcC-----------
Confidence 9998642211 1122333222221 111 012456889999999888543321
Q ss_pred CCCCCCCCCeEEccCC
Q psy5825 508 APIPRTDPPVYNLSIS 523 (596)
Q Consensus 508 ~~~~~~~~~vyni~~~ 523 (596)
..|+++.+.+|
T Consensus 268 -----itG~~i~VDGG 278 (284)
T d1e7wa_ 268 -----ITGTCVKVDGG 278 (284)
T ss_dssp -----CCSCEEEESTT
T ss_pred -----ccCCeEEECcC
Confidence 36889999887
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=97.64 E-value=0.00011 Score=70.45 Aligned_cols=183 Identities=10% Similarity=0.011 Sum_probs=100.0
Q ss_pred CcEEEEEeccCCCCCCCCHHHHHHH---h---ccccEEEEcCccCCh---------hh---hHHHHHHHHHHHHHHHHHH
Q psy5825 277 RKVHIISGDISQPSLGISSHDQQFI---Q---HHIHVIIHAAASLRF---------DE---LIQDAFTLNIQATRELLDL 338 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL~~~~~~~l---~---~~vd~ViH~AA~v~~---------~~---~~~~~~~~NV~GT~~LL~~ 338 (596)
.++..+.+|+++... ....+..+ + ..+|++||+|+.... .. .....+.+|+.+...++..
T Consensus 55 ~~~~~~~~dv~~~~~--~~~~~~~v~~~~~~~~~ld~~i~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 132 (268)
T d2h7ma1 55 AKAPLLELDVQNEEH--LASLAGRVTEAIGAGNKLDGVVHSIGFMPQTGMGINPFFDAPYADVSKGIHISAYSYASMAKA 132 (268)
T ss_dssp SCCCEEECCTTCHHH--HHHHHHHHHHHHCTTCCEEEEEECCCCCCGGGSTTSCGGGCCHHHHHHHHHHHTHHHHHHHHH
T ss_pred CceeeEeeecccccc--cccccchhhhccccCCCcceeeecccccCccccccccccccchhhhhhhhhhhhhHHHHHHHH
Confidence 567788999986431 00111222 2 347999999996421 11 1223556677777777776
Q ss_pred HHhcCCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHH
Q psy5825 339 ATRCSQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEK 418 (596)
Q Consensus 339 a~~~~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~ 418 (596)
+....+...++.++|....... . ....|+.+|...+.+++.
T Consensus 133 ~~~~~~~~~~i~~~s~~~~~~~--------------------------------------p-~~~~y~~sK~a~~~ltr~ 173 (268)
T d2h7ma1 133 LLPIMNPGGSIVGMDFDPSRAM--------------------------------------P-AYNWMTVAKSALESVNRF 173 (268)
T ss_dssp HGGGEEEEEEEEEEECCCSSCC--------------------------------------T-TTHHHHHHHHHHHHHHHH
T ss_pred HhhhcccccccccccccccccC--------------------------------------c-ccchhhccccchhhcccc
Confidence 6653222344444444332210 0 235699999999999887
Q ss_pred Hh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHH-HHHH-HHhccceEeecCCCCccccccHHHHHHHHHHHHH
Q psy5825 419 YL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGG-AAAG-AALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVW 491 (596)
Q Consensus 419 ~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~-l~~~-~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~ 491 (596)
.+ .|+.+..+.||.|-.+....+.+ ...+... .... +........| ...-+...+|+|++++.++-
T Consensus 174 lA~e~~~~gIrVN~V~PG~v~T~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~p----l~rr~~~p~dva~~v~fL~S 246 (268)
T d2h7ma1 174 VAREAGKYGVRSNLVAAGPIRTLAMSAIVG---GALGEEAGAQIQLLEEGWDQRAP----IGWNMKDATPVAKTVCALLS 246 (268)
T ss_dssp HHHHHHTTTCEEEEEEECCCCCHHHHHHHT---TTTCHHHHHHHHHHHHHHHHHCT----TCCCTTCCHHHHHHHHHHHS
T ss_pred chhhhhccCCcceEEecCCCCChhhhhhcc---chhhhhhccchHHHHHHHHhcCC----CCCCCCCHHHHHHHHHHHhC
Confidence 65 68999999999985432211111 0111110 0001 1110000011 11235667899999999884
Q ss_pred hhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 492 KTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 492 ~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..... ..|+++.|.+|
T Consensus 247 d~a~~----------------iTG~~i~vDGG 262 (268)
T d2h7ma1 247 DWLPA----------------TTGDIIYADGG 262 (268)
T ss_dssp SSCTT----------------CCSEEEEESTT
T ss_pred chhcC----------------ccCCEEEECcC
Confidence 32211 36888888877
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.54 E-value=0.0025 Score=60.84 Aligned_cols=89 Identities=9% Similarity=-0.087 Sum_probs=57.5
Q ss_pred chHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccc
Q psy5825 403 NSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLI 477 (596)
Q Consensus 403 ~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~i 477 (596)
..|+.+|..-+.+++..+ .|+++..+.||.|.-+... .... ...+....... .| ..-+.
T Consensus 155 ~~y~asK~al~~ltr~lA~e~~~~GIrvN~I~PG~v~T~~~~-------~~~~-~~~~~~~~~~~---~p-----~~r~~ 218 (274)
T d2pd4a1 155 NVMGLAKAALESAVRYLAVDLGKHHIRVNALSAGPIRTLASS-------GIAD-FRMILKWNEIN---AP-----LRKNV 218 (274)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHTTTCEEEEEEECCCCCTTGG-------GSTT-HHHHHHHHHHH---ST-----TSSCC
T ss_pred hhhhHHHHHHHHHHHhhHHHhcCcCceecccccCcccCcccc-------ccCc-hHHHHHHHhhh---hh-----ccCCc
Confidence 569999999999987654 7899999999988654321 1111 12221111100 11 12356
Q ss_pred cHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 478 PVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 478 pVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..+|+|++++.++-..... ..|+++.+.+|
T Consensus 219 ~pedIA~~v~fL~S~~s~~----------------itG~~i~vDGG 248 (274)
T d2pd4a1 219 SLEEVGNAGMYLLSSLSSG----------------VSGEVHFVDAG 248 (274)
T ss_dssp CHHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred CHHHHHHHHHHHhChhhCC----------------CcCceEEECCC
Confidence 7899999999988643321 46889999887
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=97.48 E-value=0.014 Score=54.86 Aligned_cols=86 Identities=9% Similarity=-0.026 Sum_probs=56.7
Q ss_pred chHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccc
Q psy5825 403 NSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLI 477 (596)
Q Consensus 403 ~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~i 477 (596)
..|+.||+.-+.+.+..+ .|+++..+.||.|.-+.. .+..+...+.. .. |. ..-+.
T Consensus 170 ~~Y~asKaal~~lt~~lA~e~~~~gIrVN~I~PG~i~t~~~-----------~~~~~~~~~~~-~~---pl----~r~~~ 230 (266)
T d1mxha_ 170 CVYTMAKHALGGLTRAAALELAPRHIRVNAVAPGLSLLPPA-----------MPQETQEEYRR-KV---PL----GQSEA 230 (266)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEESSBSCCSS-----------SCHHHHHHHHT-TC---TT----TSCCB
T ss_pred hhhhhhHHHHhhhHHHHHHHhCccCcEEEEeccCcEecccc-----------CCHHHHHHHHh-cC---CC----CCCCC
Confidence 569999999999987765 789999999998854311 11222222222 11 11 11235
Q ss_pred cHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 478 PVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 478 pVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
..+|||++++.++...... ..|+++++.+|
T Consensus 231 ~peeva~~v~fL~s~~s~~----------------itG~~i~vDGG 260 (266)
T d1mxha_ 231 SAAQIADAIAFLVSKDAGY----------------ITGTTLKVDGG 260 (266)
T ss_dssp CHHHHHHHHHHHHSGGGTT----------------CCSCEEEESTT
T ss_pred CHHHHHHHHHHHhCchhCC----------------ccCCeEEECcc
Confidence 6889999999998653321 36889999887
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=97.47 E-value=0.0004 Score=65.21 Aligned_cols=130 Identities=15% Similarity=0.154 Sum_probs=83.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhc---------CCCceEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHH
Q psy5825 320 LIQDAFTLNIQATRELLDLATRC---------SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELE 390 (596)
Q Consensus 320 ~~~~~~~~NV~GT~~LL~~a~~~---------~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~ 390 (596)
.+...+++|+.+...++..+... .+..++|++||.+.+....
T Consensus 92 ~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~G~Ii~isS~~~~~~~~----------------------------- 142 (241)
T d1uaya_ 92 SFRRVLEVNLLGTFNVLRLAAWAMRENPPDAEGQRGVIVNTASVAAFEGQI----------------------------- 142 (241)
T ss_dssp HHHHHHHHHTHHHHHHHHHHHHHHTTCCCCTTSCSEEEEEECCTHHHHCCT-----------------------------
T ss_pred HHHHHHHHHhhhhHHHHHHHHHHhhhhhhhcccCceeeeeecchhhccCCC-----------------------------
Confidence 34567899999988888776531 1235899999987643210
Q ss_pred hhhhhhcCCCCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceE
Q psy5825 391 ILSSMLFGGIYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHT 465 (596)
Q Consensus 391 ~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~ 465 (596)
....|+.||+.-+.+.+..+ +|+++..+-||.|..+... . ........+.. ..+
T Consensus 143 ----------~~~~Y~asKaal~~lt~~lA~ela~~gIrVN~V~PG~i~T~~~~-------~--~~~~~~~~~~~-~~~- 201 (241)
T d1uaya_ 143 ----------GQAAYAASKGGVVALTLPAARELAGWGIRVVTVAPGLFDTPLLQ-------G--LPEKAKASLAA-QVP- 201 (241)
T ss_dssp ----------TCHHHHHHHHHHHHHHHHHHHHHGGGTEEEEEEEECSCSSHHHH-------T--SCHHHHHHHHT-TCC-
T ss_pred ----------CchhhHHHHHHHHHHHHHHHHHHhhcCCceeeecCCcccccccc-------h--hhhhHHHHHHh-cCC-
Confidence 22469999999999987766 7899999999998543210 0 01111112221 111
Q ss_pred eecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 466 FYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 466 ~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
+.+ -+.-.+|+|++++.++... . ..|+++++.+|
T Consensus 202 ~~~------R~g~pedvA~~v~fL~s~~-~-----------------iTG~~i~VDGG 235 (241)
T d1uaya_ 202 FPP------RLGRPEEYAALVLHILENP-M-----------------LNGEVVRLDGA 235 (241)
T ss_dssp SSC------SCCCHHHHHHHHHHHHHCT-T-----------------CCSCEEEESTT
T ss_pred CCC------CCcCHHHHHHHHHHHHhCC-C-----------------CCCCEEEECCc
Confidence 111 1445789999999887531 1 36889999877
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.38 E-value=0.00032 Score=67.49 Aligned_cols=151 Identities=12% Similarity=0.059 Sum_probs=93.8
Q ss_pred CcEEEEEeccCCCCCCC-CHHHHHHHhccccEEEEcCccCChh-------hhHHHHHHHHHHHHHHHHHHHHhc--CCCc
Q psy5825 277 RKVHIISGDISQPSLGI-SSHDQQFIQHHIHVIIHAAASLRFD-------ELIQDAFTLNIQATRELLDLATRC--SQLK 346 (596)
Q Consensus 277 ~rv~~v~GDl~~~~lGL-~~~~~~~l~~~vd~ViH~AA~v~~~-------~~~~~~~~~NV~GT~~LL~~a~~~--~~vk 346 (596)
..+.++.+|+.+...-- -..........+|++||+|+..... ..+...+.+|+.|+..+..++... .+-.
T Consensus 64 ~~~~~~~~d~~~~~~~~~~~~~~~~~~g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G 143 (269)
T d1xu9a_ 64 ASAHYIAGTMEDMTFAEQFVAQAGKLMGGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNG 143 (269)
T ss_dssp SEEEEEECCTTCHHHHHHHHHHHHHHHTSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTC
T ss_pred ccchhhhhhhhhHHHHHHHHHHHHHHhCCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCC
Confidence 56788888887543200 0011222234689999999875321 234568899999999988887531 1235
Q ss_pred eEEEecCcccccCCccccccccCCCCChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh------
Q psy5825 347 AILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL------ 420 (596)
Q Consensus 347 rfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~------ 420 (596)
++|++||.+.+.... ....|+.||+..+.+....+
T Consensus 144 ~ii~isS~~~~~~~p---------------------------------------~~~~Y~asKaal~~~~~~La~El~~~ 184 (269)
T d1xu9a_ 144 SIVVVSSLAGKVAYP---------------------------------------MVAAYSASKFALDGFFSSIRKEYSVS 184 (269)
T ss_dssp EEEEEEEGGGTSCCT---------------------------------------TCHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred cceEeccchhcCCCC---------------------------------------CchHHHHHHHHHHHHHHHHHHHhhhc
Confidence 899999887543110 22469999999988887654
Q ss_pred -cCCCEEEecCCccccCCCCCccccCCCCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHh
Q psy5825 421 -YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWK 492 (596)
Q Consensus 421 -~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~ 492 (596)
.++.+..+.||.|-- .+......+ ......++.+++|..++..+..
T Consensus 185 ~~~I~V~~v~PG~v~T-----------------~~~~~~~~~---------~~~~~~~~~e~~a~~i~~~~~~ 231 (269)
T d1xu9a_ 185 RVNVSITLCVLGLIDT-----------------ETAMKAVSG---------IVHMQAAPKEECALEIIKGGAL 231 (269)
T ss_dssp TCCCEEEEEEECCBCC-----------------HHHHHHSCG---------GGGGGCBCHHHHHHHHHHHHHT
T ss_pred CCCEEEEEEecCcCCC-----------------cHHHHhccC---------CccccCCCHHHHHHHHHHHhhc
Confidence 247778888887721 222222211 1223456788999888876643
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.22 E-value=0.0028 Score=61.18 Aligned_cols=151 Identities=13% Similarity=-0.023 Sum_probs=93.1
Q ss_pred ccccEEEEcCccCC-----hh----hhHHHHHHHHHHHHHHHHHHHHhc-CCCceEEEecCcccccCCccccccccCCCC
Q psy5825 303 HHIHVIIHAAASLR-----FD----ELIQDAFTLNIQATRELLDLATRC-SQLKAILHVSTLYTHSYREDIQEEFYPPLF 372 (596)
Q Consensus 303 ~~vd~ViH~AA~v~-----~~----~~~~~~~~~NV~GT~~LL~~a~~~-~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~ 372 (596)
..+|++||+||... +. ..+...+++|+.|+.+++.++... ..-...+.+++.+......
T Consensus 118 G~iDilVnnAg~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~----------- 186 (297)
T d1d7oa_ 118 GSIDILVHSLANGPEVSKPLLETSRKGYLAAISASSYSFVSLLSHFLPIMNPGGASISLTYIASERIIP----------- 186 (297)
T ss_dssp SCEEEEEECCCCCTTTTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEEECGGGTSCCT-----------
T ss_pred CCCcccccccccccccccchhhhhcccccccccchhhhhhhhhhHHHHHhhcCCcceeeeehhhccccc-----------
Confidence 46899999998642 21 234568899999999999988752 1112455555554332100
Q ss_pred ChHHHHHHHhcCChHHHHhhhhhhcCCCCCchHHHHHHHHHHHHHHHh------cCCCEEEecCCccccCCCCCccccCC
Q psy5825 373 SYEDLAHVMQTTNQEELEILSSMLFGGIYNNSYSFTKAIGESVVEKYL------YKLPLAMVRPSIVVSTWKEPIVGWSN 446 (596)
Q Consensus 373 ~~~~~~~~~~~~~e~~~~~~~p~~~~~~~~~~Y~~SK~~aE~lv~~~~------~gl~~~IlRp~~V~G~~~~p~~G~~~ 446 (596)
. ....|+.+|.....++.... +|+++..+.||.|..+...
T Consensus 187 --------------------------~-~~~~y~~aKaa~~~l~~~~a~e~~~~~gIrvN~I~PG~i~T~~~~------- 232 (297)
T d1d7oa_ 187 --------------------------G-YGGGMSSAKAALESDTRVLAFEAGRKQNIRVNTISAGPLGSRAAK------- 232 (297)
T ss_dssp --------------------------T-CTTTHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCCBCCCSS-------
T ss_pred --------------------------c-cccceecccccccccccccchhccccceEEecccccccccchhhh-------
Confidence 0 22469999999888776543 5899999999999654321
Q ss_pred CCCCcHHHHHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 447 NLYGPGGAAAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 447 ~~~~~~~l~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
.......+...+.. .. |. --+...+|+|.+++.++-..... -.|+++++.+|
T Consensus 233 ~~~~~~~~~~~~~~-~~---Pl-----gR~~~peevA~~v~fL~S~~a~~----------------itGq~i~vDGG 284 (297)
T d1d7oa_ 233 AIGFIDTMIEYSYN-NA---PI-----QKTLTADEVGNAAAFLVSPLASA----------------ITGATIYVDNG 284 (297)
T ss_dssp CCSHHHHHHHHHHH-HS---SS-----CCCBCHHHHHHHHHHHTSGGGTT----------------CCSCEEEESTT
T ss_pred hccCCHHHHHHHHh-CC---CC-----CCCCCHHHHHHHHHHHhCchhcC----------------CcCceEEECcC
Confidence 11111122222222 11 11 12467889999998887543321 36888888776
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=95.85 E-value=0.15 Score=47.19 Aligned_cols=177 Identities=12% Similarity=0.022 Sum_probs=89.3
Q ss_pred cccEEEEcCccCChhhhHHHHHHHHHHHHHHHHHHHHhc---CCCceEEEecCcccccCCccccccccCCCCChHHHHHH
Q psy5825 304 HIHVIIHAAASLRFDELIQDAFTLNIQATRELLDLATRC---SQLKAILHVSTLYTHSYREDIQEEFYPPLFSYEDLAHV 380 (596)
Q Consensus 304 ~vd~ViH~AA~v~~~~~~~~~~~~NV~GT~~LL~~a~~~---~~vkrfV~vSS~~v~g~~~~i~E~~~~~~~~~~~~~~~ 380 (596)
.+|+++|+|+.......+.....+|..|+..+....... .....++.+++.......... .+. ....
T Consensus 62 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~~- 131 (257)
T d1fjha_ 62 GMDGLVLCAGLGPQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASAHLAFDK----NPL-----ALAL- 131 (257)
T ss_dssp CCSEEEECCCCCTTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGGSSCGGG----CTT-----HHHH-
T ss_pred CCcEEEEcCCCCCcHHHHHHHHHHHHHHHHHHHHHhhhhhhhhccCcceeeeeccccchhhhh----hhh-----hhhc-
Confidence 489999999987666667777888998888877665431 233445555554332211100 000 0000
Q ss_pred HhcCChHHHHhhhhhhcCC-CCCchHHHHHHHHHHHHHHHh-----cCCCEEEecCCccccCCCCCccccCCCCCCcHHH
Q psy5825 381 MQTTNQEELEILSSMLFGG-IYNNSYSFTKAIGESVVEKYL-----YKLPLAMVRPSIVVSTWKEPIVGWSNNLYGPGGA 454 (596)
Q Consensus 381 ~~~~~e~~~~~~~p~~~~~-~~~~~Y~~SK~~aE~lv~~~~-----~gl~~~IlRp~~V~G~~~~p~~G~~~~~~~~~~l 454 (596)
..-..-....... ..+. .....|+.||..-+.+.+..+ .|+++..+-||.|-.+.... . .....+
T Consensus 132 -~~g~~~~i~s~~~-~~~~~~~~~~Y~asKaal~~ltr~lA~el~~~gIrVN~I~PG~i~T~~~~~------~-~~~~~~ 202 (257)
T d1fjha_ 132 -EAGEEAKARAIVE-HAGEQGGNLAYAGSKNALTVAVRKRAAAWGEAGVRLNTIAPGATETPLLQA------G-LQDPRY 202 (257)
T ss_dssp -HHTCHHHHHHHHH-TCCTTHHHHHHHHHHHHHHHHHHHTHHHHHHTTCEEEEEEECC----------------------
T ss_pred -cCCcEEEEeeehh-ccCCCcchHHHHHHhhhhhccccccccccccccccccccccCCcCChhHHh------h-cCCHHH
Confidence 0000000000000 0000 011359999999999998765 78999999999985432110 0 000011
Q ss_pred HHHHHhccceEeecCCCCccccccHHHHHHHHHHHHHhhhccCCCCCCCCCcCCCCCCCCCCeEEccCC
Q psy5825 455 AAGAALGLIHTFYAKHDKKCDLIPVDVATNMMLGVVWKTALDHGHVAPPASLVAPIPRTDPPVYNLSIS 523 (596)
Q Consensus 455 ~~~~~~g~~~~~~~~~~~~~d~ipVDdva~aii~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vyni~~~ 523 (596)
...+.... .| .-=+...+|+|++++.++-..... -.|+++.+.+|
T Consensus 203 ~~~~~~~~---~P-----lgR~g~p~eva~~v~fL~S~~s~~----------------itG~~i~vDGG 247 (257)
T d1fjha_ 203 GESIAKFV---PP-----MGRRAEPSEMASVIAFLMSPAASY----------------VHGAQIVIDGG 247 (257)
T ss_dssp ------CC---CS-----TTSCCCTHHHHHHHHHHTSGGGTT----------------CCSCEEEESTT
T ss_pred HHHHHhcC---CC-----CCCCcCHHHHHHHHHHHhCchhCC----------------ccCceEEeCCC
Confidence 11111100 11 112456789999999887543321 36889999777
|