Psyllid ID: psy5844

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440--
Protein Sequence
MLRLRNLALKSSTLGSLKNYSAAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW
Secondary Structure (PSIPRED)
cccHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHcccccccccccccccccEEEEEEEcccEEEEEEccccHHHHHHHHHHHHHHHHccEEEEcccccccHHHHHHHHHHHHHccccccEEEcccccHHHHHHHHcccccEEEccccHHHHHHHHHHHHccccccEEEEcccccccEEcccccHHHHHHHHHHHHHcccccccccccEEEEEcccHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHHHHHHcccEEEEcccccccccEEEccccccccccccEEEcccccccEEEEcccccHHHHHHHHcccccccHHHHccccHHHHHHHHHHccccEEEEcccccccccccccccccccccccccccccHHHHHHHHHccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHHHHHHHHHHHHHcccccccccccccccccccEEEccEEHHHHHHHHHHHHcccHHHHHHcHHHHHHHHHHHHHHHHHHccEEEEEcHHHcEEEEEEEEccEEEEEcccccHHHHHHHHHHHHHHcccEEEEEccccccHHHHHHHHHHHHcccccccEEEccccHHHHHHHHccccccEEEEEccHHHHHHHHHHHHHccccEEEEEcccccEEEEcccccHHHHHHHHHHHHHHHHHcccccccEEEEEHHHHHHHHHHHHHHHHcccEcccccccccEcccccHHHHHHHHHHHHHHHHcccEEEEcccEcccccccEccEEEEccccccHHHHccccccEEEEEEEccHHHHHHHHHccccccEEEEEccEHHHHHHHHHHccccEEEEEccHHHHHHHHHccccccEEEEEccEHHHHHHHHHHccccEEE
Coil and Loop (DISEMBL)
mlrlrnlalksstlgslknysaaavpkpitkpkiehTQLFINNEFvnaqssletldngkpynmsysVDVEYSLRTLRYYAGfadkihgktipingdffaytrhepvgvcgqiipwnfpLLMLAWKIapalatgntivlkpaeqtplTALAVGALIAeagipegvvnivpgygdagaalvqhpgvdkvaftgstevgklvqqgsgasnlkrttlelggkspniifaDADLDAAVEGAhfglffnmgqcccagsrtfvqdTIYDEFVARsgerakrrtvgdpfdlnveqgpqidKEQMDKILEFIESGKSQGAQLVagggragdkgfyvqptvfanVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFtkdldktnyvtqglragtliRFSSIEEVIERANNSDYGLAAAVFtkdldktnyvtqglragtvw
Flexible Loop (DISEMBL)
mlrlrnlalksstlgslknysaaavpkpitkPKIEHTQLFINNEFVNAQSSLEtldngkpynMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGklvqqgsgasnlKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFvarsgerakrrtvgdpfdlnveqgpqiDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVftkdldktnyvtqglragtlirFSSIEEVIERANNSDYGLAAAVftkdldktnyvtqglragtvw
Low Complexity Region (SEG)
MLRLRNLALKSSTLGSLKNYSAAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW
Disordered region (IsUnstruct)
****************************ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLV************TLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR*******************************ILEFI********QLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR*****
Disordered Region (DISOPRED)
**RLRNLALKSSTLGSLKNYSAAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW
Disordered Region (DISEMBL)
MLRLRNLALKSSTLGSLKNYSAAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW
Disordered Region (DISPRO)
MLRLRNLALKSSTLGSLKNYSAAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MLRLRNLALKSSTLGSLKNYSAAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	442	2.2.26 [Sep-21-2011]
P47738	519	Aldehyde dehydrogenase, m	yes	N/A	0.787	0.670	0.704	1e-149
P11884	519	Aldehyde dehydrogenase, m	yes	N/A	0.787	0.670	0.704	1e-149
P81178	500	Aldehyde dehydrogenase, m	N/A	N/A	0.787	0.696	0.704	1e-148
Q5RF00	517	Aldehyde dehydrogenase, m	yes	N/A	0.787	0.673	0.702	1e-148
P05091	517	Aldehyde dehydrogenase, m	no	N/A	0.787	0.673	0.702	1e-148
Q2XQV4	521	Aldehyde dehydrogenase, m	yes	N/A	0.787	0.667	0.704	1e-147
P20000	520	Aldehyde dehydrogenase, m	yes	N/A	0.787	0.669	0.696	1e-147
Q63639	518	Retinal dehydrogenase 2 O	no	N/A	0.787	0.671	0.670	1e-144
O94788	518	Retinal dehydrogenase 2 O	no	N/A	0.787	0.671	0.670	1e-144
Q62148	518	Retinal dehydrogenase 2 O	no	N/A	0.787	0.671	0.667	1e-144

>sp|P47738|ALDH2_MOUSE Aldehyde dehydrogenase, mitochondrial OS=Mus musculus GN=Aldh2 PE=1 SV=1

 Score =  528 bits (1359), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 246/349 (70%), Positives = 293/349 (83%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 122 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 181

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 182 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 241

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H GVDKVAFTGSTEVG L+Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 242 GFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 301

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ +YDEFV RS  RAK R VG+PFD   EQG
Sbjct: 302 MDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQG 361

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I+SG+ +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 362 PQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFG 421

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RAN+S YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 422 PVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTV 470

Is capable of converting retinaldehyde to retinoic acid.
Mus musculus (taxid: 10090)
EC: 1EC: .EC: 2EC: .EC: 1EC: .EC: 3

>sp|P11884|ALDH2_RAT Aldehyde dehydrogenase, mitochondrial OS=Rattus norvegicus GN=Aldh2 PE=1 SV=1

 Score =  527 bits (1357), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 246/349 (70%), Positives = 292/349 (83%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 122 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 181

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 182 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 241

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTEVG L+Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 242 GFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 301

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ +YDEFV RS  RAK R VG+PFD   EQG
Sbjct: 302 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQG 361

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I+SG+ +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 362 PQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFG 421

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 422 PVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTV 470

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P81178|ALDH2_MESAU Aldehyde dehydrogenase, mitochondrial OS=Mesocricetus auratus GN=ALDH2 PE=1 SV=1

 Score =  526 bits (1355), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 246/349 (70%), Positives = 292/349 (83%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 103 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 162

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 222

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTEVG L+Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 223 GFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 282

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ +YDEFV RS  RAK R VG+PFD   EQG
Sbjct: 283 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQG 342

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I+SG+ +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 343 PQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFG 402

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 403 PVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTV 451

Mesocricetus auratus (taxid: 10036)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q5RF00|ALDH2_PONAB Aldehyde dehydrogenase, mitochondrial OS=Pongo abelii GN=ALDH2 PE=2 SV=1

 Score =  524 bits (1350), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 245/349 (70%), Positives = 292/349 (83%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 120 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 179

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 180 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 239

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 240 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 299

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 300 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 359

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 360 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 419

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 420 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 468

Is capable of converting retinaldehyde to retinoic acid.

Pongo abelii (taxid: 9601)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P05091|ALDH2_HUMAN Aldehyde dehydrogenase, mitochondrial OS=Homo sapiens GN=ALDH2 PE=1 SV=2

 Score =  524 bits (1350), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 245/349 (70%), Positives = 292/349 (83%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 120 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 179

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 180 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 239

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 240 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 299

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 300 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 359

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 360 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 419

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 420 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 468

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q2XQV4|ALDH2_PIG Aldehyde dehydrogenase, mitochondrial OS=Sus scrofa GN=ALDH2 PE=2 SV=1

 Score =  521 bits (1343), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 246/349 (70%), Positives = 290/349 (83%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKT+PI+GD+F+YTRHEPVGVC
Sbjct: 124 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVC 183

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K +EQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 184 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVP 243

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           GYG  AGAA+  H  VDKVAFTGSTEVG L+Q  +G SNLKR TLELGGKSPNII +DAD
Sbjct: 244 GYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDAD 303

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ IY EFV RS  RA+ R VG+PFD   EQG
Sbjct: 304 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQG 363

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQID+ Q  KIL +I+SGK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 364 PQIDETQFKKILGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFG 423

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEVI RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 424 PVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTV 472

Is capable of converting retinaldehyde to retinoic acid.

Sus scrofa (taxid: 9823)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|P20000|ALDH2_BOVIN Aldehyde dehydrogenase, mitochondrial OS=Bos taurus GN=ALDH2 PE=1 SV=2

 Score =  520 bits (1340), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 243/349 (69%), Positives = 290/349 (83%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GD+F+YTRHEPVGVC
Sbjct: 123 AALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVC 182

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVN++P
Sbjct: 183 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIP 242

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTEVG L+Q  +G SNLKR TLELGGKSPNII +DAD
Sbjct: 243 GFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDAD 302

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ IY EFV RS  RAK R VG+PFD   EQG
Sbjct: 303 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQG 362

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  K+L +I+SGK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 363 PQVDETQFKKVLGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFG 422

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F S+EEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 423 PVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTV 471

Bos taurus (taxid: 9913)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

>sp|Q63639|AL1A2_RAT Retinal dehydrogenase 2 OS=Rattus norvegicus GN=Aldh1a2 PE=1 SV=2

 Score =  512 bits (1318), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 234/349 (67%), Positives = 294/349 (84%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +++E+L+ GKP+  ++ +D++  ++TLRYYAG+ADKIHG TIP++GD+F +TRHEP+GVC
Sbjct: 121 ATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVC 180

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM  WKIAPAL  GNT+V+KPAEQTPL+AL +GALI EAG P GVVNI+P
Sbjct: 181 GQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILP 240

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           GYG  AGAA+  H G+DK+AFTGSTEVGKL+Q+ +G SNLKR TLELGGKSPNIIFADAD
Sbjct: 241 GYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADAD 300

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD AVE AH G+FFN GQCC AGSR FV+++IY+EFV RS ERAKRR VG PFD   EQG
Sbjct: 301 LDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQG 360

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQIDK+Q +KILE I+SG ++GA+L  GG   G KGF+++PTVF+NV DDM+IA+EEIFG
Sbjct: 361 PQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFG 420

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQ+++RF +++EVIERANNSD+GL AAVFT D++K   V+  ++AGT+
Sbjct: 421 PVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTV 469

Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Does metabolize octanal and decanal but does not metabolize citral, benzaldehyde, acetaldehyde and propanal efficiently.

Rattus norvegicus (taxid: 10116)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|O94788|AL1A2_HUMAN Retinal dehydrogenase 2 OS=Homo sapiens GN=ALDH1A2 PE=1 SV=3

 Score =  511 bits (1316), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 234/349 (67%), Positives = 294/349 (84%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +++E+L+ GKP+  ++ VD++  ++T RYYAG+ADKIHG TIP++GD+F +TRHEP+GVC
Sbjct: 121 ATMESLNGGKPFLQAFYVDLQGVIKTFRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVC 180

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWKIAPAL  GNT+V+KPAEQTPL+AL +GALI EAG P GV+NI+P
Sbjct: 181 GQIIPWNFPLLMFAWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVINILP 240

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           GYG  AGAA+  H G+DK+AFTGSTEVGKL+Q+ +G SNLKR TLELGGKSPNIIFADAD
Sbjct: 241 GYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADAD 300

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD AVE AH G+FFN GQCC AGSR FV+++IY+EFV RS ERAKRR VG PFD   EQG
Sbjct: 301 LDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVRRSVERAKRRVVGSPFDPTTEQG 360

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQIDK+Q +KILE I+SG ++GA+L  GG   G KGF+++PTVF+NV DDM+IA+EEIFG
Sbjct: 361 PQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFG 420

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQ+++RF +++EVIERANNSD+GL AAVFT D++K   V+  ++AGT+
Sbjct: 421 PVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALTVSSAMQAGTV 469

Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Does metabolize octanal and decanal but does not metabolize citral, benzaldehyde, acetaldehyde and propanal efficiently.

Homo sapiens (taxid: 9606)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

>sp|Q62148|AL1A2_MOUSE Retinal dehydrogenase 2 OS=Mus musculus GN=Aldh1a2 PE=1 SV=2

 Score =  511 bits (1316), Expect = e-144,   Method: Compositional matrix adjust.
 Identities = 233/349 (66%), Positives = 294/349 (84%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +++E+L+ GKP+  ++ +D++  ++TLRYYAG+ADKIHG TIP++GD+F +TRHEP+GVC
Sbjct: 121 ATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVC 180

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM  WKIAPAL  GNT+V+KPAEQTPL+AL +GALI EAG P GVVNI+P
Sbjct: 181 GQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILP 240

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           GYG  AGAA+  H G+DK+AFTGSTEVGKL+Q+ +G SNLKR TLELGGKSPNIIFADAD
Sbjct: 241 GYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADAD 300

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD AVE AH G+FFN GQCC AGSR FV+++IY+EFV RS ERAKRR VG PFD   EQG
Sbjct: 301 LDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQG 360

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQIDK+Q +K+LE I+SG ++GA+L  GG   G KGF+++PTVF+NV DDM+IA+EEIFG
Sbjct: 361 PQIDKKQYNKVLELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFG 420

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQ+++RF +++EVIERANNSD+GL AAVFT D++K   V+  ++AGT+
Sbjct: 421 PVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTV 469

Recognizes as substrates free retinal and cellular retinol-binding protein-bound retinal. Does metabolize octanal and decanal but does not metabolize citral, benzaldehyde, acetaldehyde and propanal efficiently.

Mus musculus (taxid: 10090)

EC: 1

EC: .

EC: 2

EC: .

EC: 1

EC: .

EC: 3

EC: 6

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	442
195051033	521	GH13324 [Drosophila grimshawi] gi|193900	0.787	0.667	0.773	1e-163
110611284	525	1-pyrroline-5-carboxylate dehydrogenase	0.787	0.662	0.747	1e-161
195116847	519	GI17663 [Drosophila mojavensis] gi|19391	0.805	0.685	0.739	1e-161
156554375	511	PREDICTED: aldehyde dehydrogenase, mitoc	0.787	0.681	0.752	1e-160
312375378	519	hypothetical protein AND_14241 [Anophele	0.787	0.670	0.756	1e-160
68051705	563	GH22814p [Drosophila melanogaster]	0.787	0.618	0.756	1e-160
195398534	519	GJ17859 [Drosophila virilis] gi|19414153	0.805	0.685	0.734	1e-159
195339439	520	GM17439 [Drosophila sechellia] gi|194130	0.787	0.669	0.756	1e-159
20129399	520	aldehyde dehydrogenase, isoform A [Droso	0.787	0.669	0.756	1e-159
157738865	520	aldehyde dehydrogenase [Drosophila melan	0.787	0.669	0.756	1e-159

>gi|195051033|ref|XP_001993018.1| GH13324 [Drosophila grimshawi] gi|193900077|gb|EDV98943.1| GH13324 [Drosophila grimshawi]

 Score =  582 bits (1499), Expect = e-163,   Method: Compositional matrix adjust.
 Identities = 270/349 (77%), Positives = 308/349 (88%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           SSLETLDNGKPY MSYSVD+  +++ LRY+AG+ADK HGKTIP++GDFF YTRHEPVGVC
Sbjct: 124 SSLETLDNGKPYTMSYSVDLPVAIKNLRYFAGWADKNHGKTIPMDGDFFTYTRHEPVGVC 183

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFP+LM+AWK+ PALATGNTIVLKPAEQT LTAL +  L+ EAG PEGVVN+VP
Sbjct: 184 GQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVP 243

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G+GDAGAAL  H  VDKVAFTGST+VGKL+Q  SG +NLKR TLELGGKSPNII +D+DL
Sbjct: 244 GFGDAGAALANHTDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDSDL 303

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           D AVE AHFGLFFNMGQCCCAGSRTFV+D IYDEFV RS ERAK+RT+G+PFDLN EQGP
Sbjct: 304 DYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTIGNPFDLNTEQGP 363

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRA-GDKGFYVQPTVFANVRDDMKIAREEIFG 348
           Q+++EQMDKIL  I++GK QGA+LVAGG RA G  G++VQPTVFANV+D+M IAREEIFG
Sbjct: 364 QVNQEQMDKILGLIQTGKQQGAKLVAGGSRADGLPGYFVQPTVFANVQDNMTIAREEIFG 423

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQQLIRF  ++EVIERANNSDYGLAAAVFTKDLDK NY+  GLRAGT+
Sbjct: 424 PVQQLIRFKKLDEVIERANNSDYGLAAAVFTKDLDKANYIVNGLRAGTV 472

Source: Drosophila grimshawi

Species: Drosophila grimshawi

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|110611284|gb|ABG77991.1| 1-pyrroline-5-carboxylate dehydrogenase 2 [Glossina morsitans morsitans] gi|289741995|gb|ADD19745.1| 1-pyrroline-5-carboxylate dehydrogenase 2 [Glossina morsitans morsitans]

 Score =  575 bits (1482), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 261/349 (74%), Positives = 309/349 (88%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +SLETLDNGKPY+MSY+VD+  S++  RY+AG+ADK HGKTIP++GDFFAYTRHEPVGVC
Sbjct: 128 ASLETLDNGKPYSMSYNVDLPMSIKNFRYFAGWADKNHGKTIPMDGDFFAYTRHEPVGVC 187

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFP+LM+AWK+ PALA GNT+VLKPAEQTPLTAL +  LI EAG PEGVVN++P
Sbjct: 188 GQIIPWNFPILMMAWKLGPALAAGNTVVLKPAEQTPLTALYIAQLIKEAGFPEGVVNVLP 247

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           GYGDAGAAL  H  VDKVAFTGSTEVGKL+QQ SG +NLKR TLELGGKSPNI+ AD D+
Sbjct: 248 GYGDAGAALANHFNVDKVAFTGSTEVGKLIQQASGNTNLKRVTLELGGKSPNIVLADTDM 307

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           D AVE +HFGLFFNMGQCCCAGSRTFV++ IY+EFV RS ERA++R  G+PFDLNVEQGP
Sbjct: 308 DYAVETSHFGLFFNMGQCCCAGSRTFVEEKIYNEFVERSAERARKRRFGNPFDLNVEQGP 367

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD-KGFYVQPTVFANVRDDMKIAREEIFG 348
           Q+D+EQ+ KIL+ I+SGK QGA+L+AGG R  +  G++VQPTVFA+V+DDM+IAREEIFG
Sbjct: 368 QVDQEQLQKILQLIDSGKQQGAKLIAGGARPEEMPGYFVQPTVFADVQDDMRIAREEIFG 427

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQQ+IRF  ++EVIERANN+DYGLAAAVFTKD+DK NY+ QGLRAGT+
Sbjct: 428 PVQQIIRFKKLDEVIERANNTDYGLAAAVFTKDIDKANYIVQGLRAGTV 476

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195116847|ref|XP_002002963.1| GI17663 [Drosophila mojavensis] gi|193913538|gb|EDW12405.1| GI17663 [Drosophila mojavensis]

 Score =  573 bits (1478), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 270/365 (73%), Positives = 314/365 (86%), Gaps = 9/365 (2%)

Query: 34  IEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI 93
           IE  Q+++        +SLETLDNGKPY+MSY+VD+  +++ LRY+AG+ADK HGKTIP+
Sbjct: 114 IERDQVYL--------ASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPM 165

Query: 94  NGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGA 153
           +GDFF YTRHEPVGVCGQIIPWNFP+LM+AWK+ PALATGNTI+LKPAEQT LTAL +  
Sbjct: 166 DGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIILKPAEQTSLTALYIAQ 225

Query: 154 LIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTL 213
           LI EAG PEGVVN+VPG+GDAGAAL  H  VDKVAFTGST+VGKL+Q  SG +NLKR TL
Sbjct: 226 LIKEAGFPEGVVNVVPGFGDAGAALANHSDVDKVAFTGSTDVGKLIQLASGNTNLKRVTL 285

Query: 214 ELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAK 273
           ELGGKSPNII AD+DLD AVE AHFGLFFNMGQCCCAGSRTFV+D IYDEFV RS ERAK
Sbjct: 286 ELGGKSPNIILADSDLDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAK 345

Query: 274 RRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA-GDKGFYVQPTVF 332
           +RTVG+PFDLN EQGPQ+++EQM+KIL  I++GK QGA+LVAGG R  G  G++VQPTVF
Sbjct: 346 KRTVGNPFDLNTEQGPQVNEEQMEKILGLIQTGKEQGAKLVAGGKRPEGLSGYFVQPTVF 405

Query: 333 ANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL 392
           A+V+D+M IAREEIFGPVQQLIRF  ++EVIERANNSDYGLAAAVFTKDLDK NY+  GL
Sbjct: 406 ADVQDNMTIAREEIFGPVQQLIRFKKLDEVIERANNSDYGLAAAVFTKDLDKANYIVGGL 465

Query: 393 RAGTL 397
           RAGT+
Sbjct: 466 RAGTV 470

Source: Drosophila mojavensis

Species: Drosophila mojavensis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156554375|ref|XP_001604192.1| PREDICTED: aldehyde dehydrogenase, mitochondrial-like [Nasonia vitripennis]

 Score =  572 bits (1473), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 262/348 (75%), Positives = 305/348 (87%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +SLETLDNGKPY+ +Y  D+  S+ TLRYYAG+ADK HGK IP++G FFAYTRHEPVGVC
Sbjct: 115 ASLETLDNGKPYSTAYGFDLPASIGTLRYYAGWADKNHGKVIPMDGKFFAYTRHEPVGVC 174

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFP+LM AWK+ PALATGN IVLKPAEQTPLTAL +  L  EAG P GVVN+VP
Sbjct: 175 GQIIPWNFPILMAAWKLGPALATGNCIVLKPAEQTPLTALYIAQLTKEAGFPAGVVNVVP 234

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G+GDAGAA+V HP VDKVAFTGSTE+G+LV++G+  SNLKRTTLELGGKSPNIIF DAD+
Sbjct: 235 GFGDAGAAIVNHPDVDKVAFTGSTEIGQLVKEGAAKSNLKRTTLELGGKSPNIIFKDADM 294

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           D AVE AHFGLFFNMGQCCCAGSRTFV+ +IYDEFV RS  RAK RTVGDPFD+NVE GP
Sbjct: 295 DQAVETAHFGLFFNMGQCCCAGSRTFVESSIYDEFVERSAARAKARTVGDPFDMNVEHGP 354

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP 349
           QID++QM+KIL  I+SGKS+GA+LV GGGR G+KG++V PTVFA+V+D+MKIAREEIFGP
Sbjct: 355 QIDEDQMNKILSMIDSGKSEGAKLVQGGGRVGEKGYFVAPTVFADVKDNMKIAREEIFGP 414

Query: 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           VQQ+++F  I +VI+RAN +DYGLAAAVFTKD+DK NYV QGLRAGT+
Sbjct: 415 VQQILKFDKISDVIQRANKTDYGLAAAVFTKDIDKANYVVQGLRAGTV 462

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|312375378|gb|EFR22765.1| hypothetical protein AND_14241 [Anopheles darlingi]

 Score =  570 bits (1469), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 264/349 (75%), Positives = 304/349 (87%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +SLETLDNGKPY MSY+ DV  ++  LRYYAG+ADK HGK IP++G+FF YTRHEPVGVC
Sbjct: 122 ASLETLDNGKPYFMSYNADVPMAISNLRYYAGWADKNHGKVIPMDGEFFVYTRHEPVGVC 181

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFP+LM AWK  PALATGNTI+LKPAEQT LTAL +  L  EAG P GV+N+VP
Sbjct: 182 GQIIPWNFPILMAAWKFGPALATGNTIILKPAEQTSLTALYLAQLTKEAGFPPGVINVVP 241

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           GYGDAGAALV HP VDKVAFTGSTEVGKL+QQG+GASNLKRTTLELGGKSPNII ADAD+
Sbjct: 242 GYGDAGAALVNHPDVDKVAFTGSTEVGKLIQQGAGASNLKRTTLELGGKSPNIILADADM 301

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
             AVE +HFGLFFNMGQCCCAGSRTF++D IYDEFV RS ERA++RTVG+PFDL  E GP
Sbjct: 302 KHAVETSHFGLFFNMGQCCCAGSRTFIEDKIYDEFVERSAERAQKRTVGNPFDLTTEHGP 361

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD-KGFYVQPTVFANVRDDMKIAREEIFG 348
           Q+DKEQ DKIL  I++GK QGA+LVAGG +  D  G+++QPTVFA+V+DDM IA+EEIFG
Sbjct: 362 QVDKEQYDKILGLIDTGKQQGARLVAGGDKVTDLPGYFIQPTVFADVQDDMTIAKEEIFG 421

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQQLIRF S++EVIERANN+DYGLAAAVF+KD+DK NY+ QGLRAGT+
Sbjct: 422 PVQQLIRFKSLDEVIERANNTDYGLAAAVFSKDIDKVNYLVQGLRAGTV 470

Source: Anopheles darlingi

Species: Anopheles darlingi

Genus: Anopheles

Family: Culicidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|68051705|gb|AAY85116.1| GH22814p [Drosophila melanogaster]

 Score =  570 bits (1468), Expect = e-160,   Method: Compositional matrix adjust.
 Identities = 264/349 (75%), Positives = 306/349 (87%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +SLETLDNGKPY+MSY+VD+  +++ LRY+AG+ADK HGKTIP++GDFF YTRHEPVGVC
Sbjct: 166 ASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMDGDFFTYTRHEPVGVC 225

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFP+LM+AWK+ PALATGNTIVLKPAEQT LTAL +  L+ EAG PEGVVN+VP
Sbjct: 226 GQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVP 285

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G+G AGAAL  H  VDKVAFTGST+VGKL+Q  SG +NLKR TLELGGKSPNII +D D+
Sbjct: 286 GFGTAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDM 345

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           D AVE AHFGLFFNMGQCCCAGSRTFV+D IYDEFV RS ERAK+RTVG+PFDLN EQGP
Sbjct: 346 DYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGP 405

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGR-AGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           Q+++EQM+KIL  I++GK QGA+LVAGG R  G  G++VQPTVFA+V+DDM IAREEIFG
Sbjct: 406 QVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFG 465

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQQLIRF  ++EVIERANNS+YGLAAAVFTKDLDK NY+  GLRAGT+
Sbjct: 466 PVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTV 514

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195398534|ref|XP_002057876.1| GJ17859 [Drosophila virilis] gi|194141530|gb|EDW57949.1| GJ17859 [Drosophila virilis]

 Score =  569 bits (1467), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 268/365 (73%), Positives = 314/365 (86%), Gaps = 9/365 (2%)

Query: 34  IEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI 93
           IE  Q+++        +SLETLDNGKPY+M+Y+VD+  +++ LRY+AG+ADK HGKTIP+
Sbjct: 114 IERDQVYL--------ASLETLDNGKPYSMAYNVDLPTAIKNLRYFAGWADKNHGKTIPM 165

Query: 94  NGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGA 153
           +GDFF YTRHEPVGVCGQIIPWNFP+LM+AWK+ PALATGNTIVLKPAEQT LTAL +  
Sbjct: 166 DGDFFTYTRHEPVGVCGQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQ 225

Query: 154 LIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTL 213
           LI EAG PEGVVN+VPG+GDAGAAL  H  VDKVAFTGST+VGKL+Q  SG +NLKR TL
Sbjct: 226 LIKEAGFPEGVVNVVPGFGDAGAALANHSDVDKVAFTGSTDVGKLIQLASGNTNLKRVTL 285

Query: 214 ELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAK 273
           ELGGKSPNII AD+DLD AVE AHFGLFFNMGQCCCAGSRTFV+D IYDEFV RS ERAK
Sbjct: 286 ELGGKSPNIILADSDLDYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAK 345

Query: 274 RRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGR-AGDKGFYVQPTVF 332
           +RTVG+PFDL+ EQGPQ+++EQM+KIL  I++GK QGA+LVAGG R  G  G++VQPTVF
Sbjct: 346 KRTVGNPFDLSTEQGPQVNQEQMEKILGLIQTGKQQGAKLVAGGNRPQGLPGYFVQPTVF 405

Query: 333 ANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL 392
           A+V+D+M IAREEIFGPVQQLIRF  ++EVIERANNS+YGLAAAVFTKDLDK NY+  GL
Sbjct: 406 ADVQDNMTIAREEIFGPVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGL 465

Query: 393 RAGTL 397
           RAGT+
Sbjct: 466 RAGTV 470

Source: Drosophila virilis

Species: Drosophila virilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195339439|ref|XP_002036327.1| GM17439 [Drosophila sechellia] gi|194130207|gb|EDW52250.1| GM17439 [Drosophila sechellia]

 Score =  568 bits (1464), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 264/349 (75%), Positives = 306/349 (87%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +SLETLDNGKPY+MSY+VD+  +++ LRY+AG+ADK HGKTIP++GDFF YTRHEPVGVC
Sbjct: 123 ASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMDGDFFTYTRHEPVGVC 182

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFP+LM+AWK+ PALATGNTIVLKPAEQT LTAL +  L+ EAG PEGVVN+VP
Sbjct: 183 GQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVP 242

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G+G AGAAL  H  VDKVAFTGST+VGKL+Q  SG +NLKR TLELGGKSPNII +D D+
Sbjct: 243 GFGTAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDM 302

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           D AVE AHFGLFFNMGQCCCAGSRTFV+D IYDEFV RS ERAK+RTVG+PFDLN EQGP
Sbjct: 303 DYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGP 362

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGR-AGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           Q+++EQM+KIL  I++GK QGA+LVAGG R  G  G++VQPTVFA+V+DDM IAREEIFG
Sbjct: 363 QVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFG 422

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQQLIRF  ++EVIERANNS+YGLAAAVFTKDLDK NY+  GLRAGT+
Sbjct: 423 PVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTV 471

Source: Drosophila sechellia

Species: Drosophila sechellia

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|20129399|ref|NP_609285.1| aldehyde dehydrogenase, isoform A [Drosophila melanogaster] gi|442627006|ref|NP_001260290.1| aldehyde dehydrogenase, isoform B [Drosophila melanogaster] gi|7297513|gb|AAF52769.1| aldehyde dehydrogenase, isoform A [Drosophila melanogaster] gi|157738847|gb|ABV68992.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738849|gb|ABV68993.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738851|gb|ABV68994.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738853|gb|ABV68995.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738855|gb|ABV68996.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738857|gb|ABV68997.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738859|gb|ABV68998.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738861|gb|ABV68999.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738863|gb|ABV69000.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|440213605|gb|AGB92825.1| aldehyde dehydrogenase, isoform B [Drosophila melanogaster]

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 264/349 (75%), Positives = 306/349 (87%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +SLETLDNGKPY+MSY+VD+  +++ LRY+AG+ADK HGKTIP++GDFF YTRHEPVGVC
Sbjct: 123 ASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMDGDFFTYTRHEPVGVC 182

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFP+LM+AWK+ PALATGNTIVLKPAEQT LTAL +  L+ EAG PEGVVN+VP
Sbjct: 183 GQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVP 242

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G+G AGAAL  H  VDKVAFTGST+VGKL+Q  SG +NLKR TLELGGKSPNII +D D+
Sbjct: 243 GFGTAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDM 302

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           D AVE AHFGLFFNMGQCCCAGSRTFV+D IYDEFV RS ERAK+RTVG+PFDLN EQGP
Sbjct: 303 DYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGP 362

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGR-AGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           Q+++EQM+KIL  I++GK QGA+LVAGG R  G  G++VQPTVFA+V+DDM IAREEIFG
Sbjct: 363 QVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFG 422

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQQLIRF  ++EVIERANNS+YGLAAAVFTKDLDK NY+  GLRAGT+
Sbjct: 423 PVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTV 471

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|157738865|gb|ABV69001.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738867|gb|ABV69002.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738869|gb|ABV69003.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738871|gb|ABV69004.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|157738873|gb|ABV69005.1| aldehyde dehydrogenase [Drosophila melanogaster] gi|161511955|emb|CAP46844.1| aldehyde dehydrogenase [Drosophila melanogaster]

 Score =  567 bits (1462), Expect = e-159,   Method: Compositional matrix adjust.
 Identities = 264/349 (75%), Positives = 306/349 (87%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +SLETLDNGKPY+MSY+VD+  +++ LRY+AG+ADK HGKTIP++GDFF YTRHEPVGVC
Sbjct: 123 ASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMDGDFFTYTRHEPVGVC 182

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFP+LM+AWK+ PALATGNTIVLKPAEQT LTAL +  L+ EAG PEGVVN+VP
Sbjct: 183 GQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVP 242

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G+G AGAAL  H  VDKVAFTGST+VGKL+Q  SG +NLKR TLELGGKSPNII +D D+
Sbjct: 243 GFGTAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDM 302

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           D AVE AHFGLFFNMGQCCCAGSRTFV+D IYDEFV RS ERAK+RTVG+PFDLN EQGP
Sbjct: 303 DYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGP 362

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGR-AGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           Q+++EQM+KIL  I++GK QGA+LVAGG R  G  G++VQPTVFA+V+DDM IAREEIFG
Sbjct: 363 QVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFG 422

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQQLIRF  ++EVIERANNS+YGLAAAVFTKDLDK NY+  GLRAGT+
Sbjct: 423 PVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTV 471

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	442
FB|FBgn0012036	520	Aldh "Aldehyde dehydrogenase"	0.787	0.669	0.756	4.6e-150
RGD|69219	519	Aldh2 "aldehyde dehydrogenase	0.787	0.670	0.704	1.7e-139
MGI|MGI:99600	519	Aldh2 "aldehyde dehydrogenase	0.787	0.670	0.704	2.7e-139
UNIPROTKB|P20000	520	ALDH2 "Aldehyde dehydrogenase,	0.787	0.669	0.696	2.7e-139
UNIPROTKB|F1PBJ8	521	ALDH2 "Uncharacterized protein	0.787	0.667	0.710	4.4e-139
UNIPROTKB|E1BT93	519	ALDH2 "Uncharacterized protein	0.787	0.670	0.690	7.2e-139
UNIPROTKB|E7EUE5	470	ALDH2 "Aldehyde dehydrogenase,	0.800	0.753	0.690	1.2e-138
UNIPROTKB|P05091	517	ALDH2 "Aldehyde dehydrogenase,	0.787	0.673	0.702	1.2e-138
UNIPROTKB|Q2XQV4	521	ALDH2 "Aldehyde dehydrogenase,	0.787	0.667	0.704	3.1e-138
ZFIN|ZDB-GENE-030326-5	516	aldh2.2 "aldehyde dehydrogenas	0.787	0.674	0.679	1.9e-136

FB|FBgn0012036 Aldh "Aldehyde dehydrogenase" [Drosophila melanogaster (taxid:7227)]

 Score = 1414 (502.8 bits), Expect = 4.6e-150, Sum P(2) = 4.6e-150
 Identities = 264/349 (75%), Positives = 306/349 (87%)

Query:    50 SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
             +SLETLDNGKPY+MSY+VD+  +++ LRY+AG+ADK HGKTIP++GDFF YTRHEPVGVC
Sbjct:   123 ASLETLDNGKPYSMSYNVDLPTAIKNLRYFAGWADKNHGKTIPMDGDFFTYTRHEPVGVC 182

Query:   110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             GQIIPWNFP+LM+AWK+ PALATGNTIVLKPAEQT LTAL +  L+ EAG PEGVVN+VP
Sbjct:   183 GQIIPWNFPILMMAWKLGPALATGNTIVLKPAEQTSLTALYIAQLVKEAGFPEGVVNVVP 242

Query:   170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
             G+G AGAAL  H  VDKVAFTGST+VGKL+Q  SG +NLKR TLELGGKSPNII +D D+
Sbjct:   243 GFGTAGAALANHCDVDKVAFTGSTDVGKLIQLASGNTNLKRVTLELGGKSPNIILSDTDM 302

Query:   230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
             D AVE AHFGLFFNMGQCCCAGSRTFV+D IYDEFV RS ERAK+RTVG+PFDLN EQGP
Sbjct:   303 DYAVETAHFGLFFNMGQCCCAGSRTFVEDKIYDEFVERSAERAKKRTVGNPFDLNTEQGP 362

Query:   290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRA-GDKGFYVQPTVFANVRDDMKIAREEIFG 348
             Q+++EQM+KIL  I++GK QGA+LVAGG R  G  G++VQPTVFA+V+DDM IAREEIFG
Sbjct:   363 QVNEEQMEKILGMIKTGKKQGAKLVAGGSRPEGLPGYFVQPTVFADVQDDMTIAREEIFG 422

Query:   349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             PVQQLIRF  ++EVIERANNS+YGLAAAVFTKDLDK NY+  GLRAGT+
Sbjct:   423 PVQQLIRFKKLDEVIERANNSEYGLAAAVFTKDLDKANYIVGGLRAGTV 471

GO:0006117 "acetaldehyde metabolic process" evidence=IMP

GO:0008774 "acetaldehyde dehydrogenase (acetylating) activity" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISS;IDA

GO:0005739 "mitochondrion" evidence=ISS;IDA

GO:0006090 "pyruvate metabolic process" evidence=ISS

GO:0005759 "mitochondrial matrix" evidence=ISS

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0045471 "response to ethanol" evidence=IMP

GO:0005811 "lipid particle" evidence=IDA

RGD|69219 Aldh2 "aldehyde dehydrogenase 2 family (mitochondrial)" [Rattus norvegicus (taxid:10116)]

 Score = 1318 (469.0 bits), Expect = 1.7e-139, Sum P(2) = 1.7e-139
 Identities = 246/349 (70%), Positives = 292/349 (83%)

Query:    50 SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
             ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct:   122 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 181

Query:   110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct:   182 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 241

Query:   170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
             G+G  AGAA+  H  VDKVAFTGSTEVG L+Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct:   242 GFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 301

Query:   229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
             +D AVE AHF LFFN GQCCCAGSRTFVQ+ +YDEFV RS  RAK R VG+PFD   EQG
Sbjct:   302 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYDEFVERSVARAKSRVVGNPFDSRTEQG 361

Query:   289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             PQ+D+ Q  KIL +I+SG+ +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct:   362 PQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFG 421

Query:   349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct:   422 PVMQILKFKTIEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTV 470

GO:0001889 "liver development" evidence=IEP

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO;IDA

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0032355 "response to estradiol stimulus" evidence=IEP

GO:0032496 "response to lipopolysaccharide" evidence=IEP

GO:0032570 "response to progesterone stimulus" evidence=IEP

GO:0032870 "cellular response to hormone stimulus" evidence=IEP

GO:0033574 "response to testosterone stimulus" evidence=IEP

GO:0035094 "response to nicotine" evidence=IEP

GO:0042802 "identical protein binding" evidence=IDA

GO:0043066 "negative regulation of apoptotic process" evidence=IMP

GO:0055093 "response to hyperoxia" evidence=IEP

GO:0070404 "NADH binding" evidence=IDA

GO:0071398 "cellular response to fatty acid" evidence=IEP

MGI|MGI:99600 Aldh2 "aldehyde dehydrogenase 2, mitochondrial" [Mus musculus (taxid:10090)]

 Score = 1321 (470.1 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
 Identities = 246/349 (70%), Positives = 293/349 (83%)

Query:    50 SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
             ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct:   122 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 181

Query:   110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct:   182 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 241

Query:   170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
             G+G  AGAA+  H GVDKVAFTGSTEVG L+Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct:   242 GFGPTAGAAIASHEGVDKVAFTGSTEVGHLIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 301

Query:   229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
             +D AVE AHF LFFN GQCCCAGSRTFVQ+ +YDEFV RS  RAK R VG+PFD   EQG
Sbjct:   302 MDWAVEQAHFALFFNQGQCCCAGSRTFVQENVYDEFVERSVARAKSRVVGNPFDSRTEQG 361

Query:   289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             PQ+D+ Q  KIL +I+SG+ +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct:   362 PQVDETQFKKILGYIKSGQQEGAKLLCGGGAAADRGYFIQPTVFGDVKDGMTIAKEEIFG 421

Query:   349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             PV Q+++F +IEEV+ RAN+S YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct:   422 PVMQILKFKTIEEVVGRANDSKYGLAAAVFTKDLDKANYLSQALQAGTV 470

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=ISO

GO:0005739 "mitochondrion" evidence=ISO;IDA

GO:0008152 "metabolic process" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0042802 "identical protein binding" evidence=ISO

GO:0043066 "negative regulation of apoptotic process" evidence=ISO

GO:0055114 "oxidation-reduction process" evidence=ISO

GO:0070404 "NADH binding" evidence=ISO

UNIPROTKB|P20000 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Bos taurus (taxid:9913)]

 Score = 1306 (464.8 bits), Expect = 2.7e-139, Sum P(2) = 2.7e-139
 Identities = 243/349 (69%), Positives = 290/349 (83%)

Query:    50 SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
             ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GD+F+YTRHEPVGVC
Sbjct:   123 AALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVC 182

Query:   110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVN++P
Sbjct:   183 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIP 242

Query:   170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
             G+G  AGAA+  H  VDKVAFTGSTEVG L+Q  +G SNLKR TLELGGKSPNII +DAD
Sbjct:   243 GFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDAD 302

Query:   229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
             +D AVE AHF LFFN GQCCCAGSRTFVQ+ IY EFV RS  RAK R VG+PFD   EQG
Sbjct:   303 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQG 362

Query:   289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             PQ+D+ Q  K+L +I+SGK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct:   363 PQVDETQFKKVLGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFG 422

Query:   349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             PV Q+++F S+EEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct:   423 PVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTV 471

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

UNIPROTKB|F1PBJ8 ALDH2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1310 (466.2 bits), Expect = 4.4e-139, Sum P(2) = 4.4e-139
 Identities = 248/349 (71%), Positives = 290/349 (83%)

Query:    50 SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
             ++LETLDNGKPY +SY VD++  LR LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct:   124 AALETLDNGKPYVISYLVDLDMVLRCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 183

Query:   110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             GQIIPWNFPLLM AWK+ PALATGN IV+K AEQTPLTAL V  LI EAG P GVVNI+P
Sbjct:   184 GQIIPWNFPLLMQAWKLGPALATGNVIVMKVAEQTPLTALYVANLIKEAGFPPGVVNIIP 243

Query:   170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
             G+G  AGAA+  H  VDKVAFTGSTEVG LVQ  +G SNLKR TLELGGKSPNII +DAD
Sbjct:   244 GFGPTAGAAIASHEDVDKVAFTGSTEVGHLVQVAAGNSNLKRVTLELGGKSPNIIMSDAD 303

Query:   229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
             ++ AVE AHF LFFN GQCCCAGSRTFVQ+ +Y EFV RS  RAK R VG+PFD   EQG
Sbjct:   304 MNWAVEQAHFALFFNQGQCCCAGSRTFVQEDVYAEFVERSVARAKSRVVGNPFDSQTEQG 363

Query:   289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             PQ+D+ Q  KIL +I+SGK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct:   364 PQVDETQFKKILGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDTMTIAKEEIFG 423

Query:   349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             PV Q+++F +IEEVI RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct:   424 PVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTV 472

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

UNIPROTKB|E1BT93 ALDH2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1305 (464.4 bits), Expect = 7.2e-139, Sum P(2) = 7.2e-139
 Identities = 241/349 (69%), Positives = 293/349 (83%)

Query:    50 SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
             ++LETLDNGKPY++SY VD++  ++ LRY+AG++DK HGKTIP++GDFF YTRHEPVGVC
Sbjct:   122 AALETLDNGKPYSISYLVDLDMVVKCLRYFAGWSDKFHGKTIPLDGDFFCYTRHEPVGVC 181

Query:   110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPL+AL V  LI EAG P GVVNI+P
Sbjct:   182 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLSALYVANLIKEAGFPPGVVNIIP 241

Query:   170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
             GYG  AGAA+  H  VDKVAFTGSTEVG L+++ +  SNLKR TLELGGKSPNII +DAD
Sbjct:   242 GYGPTAGAAISAHMDVDKVAFTGSTEVGHLIKKAAAESNLKRVTLELGGKSPNIIMSDAD 301

Query:   229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
             +D AV+ AHF LFFN GQCCCAGSRT+VQ+ IY+EFV RS E+AK R VG+PFD   EQG
Sbjct:   302 MDWAVDQAHFALFFNQGQCCCAGSRTYVQEDIYNEFVERSVEKAKSRVVGNPFDFKTEQG 361

Query:   289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             PQ+D+EQ  KIL +I +GK +GA+L+ GG  A D+G++VQPTVF +V+D+M IAREEIFG
Sbjct:   362 PQVDEEQFKKILGYISTGKREGAKLLCGGNPAADRGYFVQPTVFGDVQDNMTIAREEIFG 421

Query:   349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             PV Q+++F +IEE+IERANNS YGLAAAVFTKD+DK NYV+Q LRAGT+
Sbjct:   422 PVMQIMKFKTIEEIIERANNSKYGLAAAVFTKDIDKANYVSQALRAGTV 470

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0005739 "mitochondrion" evidence=IEA

UNIPROTKB|E7EUE5 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 1315 (468.0 bits), Expect = 1.2e-138, Sum P(2) = 1.2e-138
 Identities = 245/355 (69%), Positives = 292/355 (82%)

Query:    44 EFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRH 103
             +      +LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRH
Sbjct:    67 QVAEGDKALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRH 126

Query:   104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEG 163
             EPVGVCGQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P G
Sbjct:   127 EPVGVCGQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPG 186

Query:   164 VVNIVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNI 222
             VVNIVPG+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNI
Sbjct:   187 VVNIVPGFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNI 246

Query:   223 IFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFD 282
             I +DAD+D AVE AHF LFFN GQCCCAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD
Sbjct:   247 IMSDADMDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFD 306

Query:   283 LNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA 342
                EQGPQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA
Sbjct:   307 SKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIA 366

Query:   343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             +EEIFGPV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct:   367 KEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 421

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

UNIPROTKB|P05091 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Homo sapiens (taxid:9606)]

 Score = 1315 (468.0 bits), Expect = 1.2e-138, Sum P(2) = 1.2e-138
 Identities = 245/349 (70%), Positives = 292/349 (83%)

Query:    50 SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
             ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct:   120 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 179

Query:   110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct:   180 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 239

Query:   170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
             G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct:   240 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 299

Query:   229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
             +D AVE AHF LFFN GQCCCAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct:   300 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 359

Query:   289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct:   360 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 419

Query:   349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct:   420 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 468

GO:0009055 "electron carrier activity" evidence=TAS

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0004030 "aldehyde dehydrogenase [NAD(P)+

GO:0005975 "carbohydrate metabolic process" evidence=TAS

GO:0006066 "alcohol metabolic process" evidence=TAS

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=EXP

GO:0005759 "mitochondrial matrix" evidence=TAS

GO:0006069 "ethanol oxidation" evidence=TAS

GO:0006805 "xenobiotic metabolic process" evidence=TAS

GO:0007268 "synaptic transmission" evidence=TAS

GO:0042136 "neurotransmitter biosynthetic process" evidence=TAS

GO:0044281 "small molecule metabolic process" evidence=TAS

UNIPROTKB|Q2XQV4 ALDH2 "Aldehyde dehydrogenase, mitochondrial" [Sus scrofa (taxid:9823)]

 Score = 1307 (465.1 bits), Expect = 3.1e-138, Sum P(2) = 3.1e-138
 Identities = 246/349 (70%), Positives = 290/349 (83%)

Query:    50 SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
             ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKT+PI+GD+F+YTRHEPVGVC
Sbjct:   124 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTLPIDGDYFSYTRHEPVGVC 183

Query:   110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             GQIIPWNFPLLM AWK+ PALATGN +V+K +EQTPLTAL V  LI EAG P GVVNIVP
Sbjct:   184 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVSEQTPLTALYVANLIKEAGFPPGVVNIVP 243

Query:   170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
             GYG  AGAA+  H  VDKVAFTGSTEVG L+Q  +G SNLKR TLELGGKSPNII +DAD
Sbjct:   244 GYGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLELGGKSPNIIMSDAD 303

Query:   229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
             +D AVE AHF LFFN GQCCCAGSRTFVQ+ IY EFV RS  RA+ R VG+PFD   EQG
Sbjct:   304 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARARSRVVGNPFDSRTEQG 363

Query:   289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             PQID+ Q  KIL +I+SGK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct:   364 PQIDETQFKKILGYIKSGKEEGAKLLCGGGAAADRGYFIQPTVFGDVQDGMTIAKEEIFG 423

Query:   349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             PV Q+++F +IEEVI RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct:   424 PVMQILKFKTIEEVIGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTV 472

GO:0006068 "ethanol catabolic process" evidence=IEA

GO:0005759 "mitochondrial matrix" evidence=IEA

GO:0004029 "aldehyde dehydrogenase (NAD) activity" evidence=IEA

ZFIN|ZDB-GENE-030326-5 aldh2.2 "aldehyde dehydrogenase 2.2" [Danio rerio (taxid:7955)]

 Score = 1296 (461.3 bits), Expect = 1.9e-136, Sum P(2) = 1.9e-136
 Identities = 237/349 (67%), Positives = 292/349 (83%)

Query:    50 SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
             + LETLDNGKPY +S+SVDV   ++ +RYYAG+ADK  GKTIPI+G++F YTRHEP+GVC
Sbjct:   119 AELETLDNGKPYAVSFSVDVPMVVKCMRYYAGWADKWEGKTIPIDGNYFCYTRHEPIGVC 178

Query:   110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             GQIIPWNFPLLM AWK+ PALATGNT+V+K AEQTPLTAL + +LI E G P GVVNIVP
Sbjct:   179 GQIIPWNFPLLMQAWKLGPALATGNTVVMKVAEQTPLTALYIASLIKEVGFPAGVVNIVP 238

Query:   170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
             G G  AGAA+  H  VDKVAFTGST+VG L+Q+ S ASNLK+ TLELGGKSPNII +DA+
Sbjct:   239 GMGPTAGAAIASHMDVDKVAFTGSTDVGHLIQRASSASNLKKVTLELGGKSPNIILSDAN 298

Query:   229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
             ++ AVE +H  LFFN GQCCCAG+RTFVQ++IYDEFV RS ERAK R VGDPFDLN EQG
Sbjct:   299 MEEAVEQSHIALFFNQGQCCCAGTRTFVQESIYDEFVERSVERAKNRIVGDPFDLNTEQG 358

Query:   289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             PQ++++Q  K+L +I SGK +GA+L+ GG  A ++G+++QPTVF +V+DDM IAREEIFG
Sbjct:   359 PQVNEDQFKKVLGYISSGKREGAKLMCGGAPAAERGYFIQPTVFGDVKDDMTIAREEIFG 418

Query:   349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             PV Q+++F S+EEVIERAN+S YGLA AVFT+D+DK NY++ GLRAGT+
Sbjct:   419 PVMQILKFKSLEEVIERANDSKYGLAGAVFTQDIDKANYISHGLRAGTV 467

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016620 "oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0008152 "metabolic process" evidence=IEA

GO:2001038 "regulation of cellular response to drug" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P41751	ALDH_ASPNG	1, ., 2, ., 1, ., 3	0.5616	0.7850	0.6981	yes	N/A
O34660	ALDH4_BACSU	1, ., 2, ., 1, ., 3	0.5121	0.8348	0.7454	yes	N/A
P47738	ALDH2_MOUSE	1, ., 2, ., 1, ., 3	0.7048	0.7873	0.6705	yes	N/A
P11884	ALDH2_RAT	1, ., 2, ., 1, ., 3	0.7048	0.7873	0.6705	yes	N/A
P32872	ALDHY_YEASX	1, ., 2, ., 1, ., 3	0.5770	0.7828	0.6771	yes	N/A
P81178	ALDH2_MESAU	1, ., 2, ., 1, ., 3	0.7048	0.7873	0.696	N/A	N/A
Q5RF00	ALDH2_PONAB	1, ., 2, ., 1, ., 3	0.7020	0.7873	0.6731	yes	N/A
P08157	ALDH_EMENI	1, ., 2, ., 1, ., 3	0.5722	0.7941	0.7062	yes	N/A
O14293	YF19_SCHPO	1, ., 2, ., 1, ., -	0.5358	0.7850	0.6898	yes	N/A
P40047	ALDH5_YEAST	1, ., 2, ., 1, ., 4	0.5026	0.8303	0.7057	yes	N/A
P20000	ALDH2_BOVIN	1, ., 2, ., 1, ., 3	0.6962	0.7873	0.6692	yes	N/A
P05091	ALDH2_HUMAN	1, ., 2, ., 1, ., 3	0.7020	0.7873	0.6731	no	N/A
Q2XQV4	ALDH2_PIG	1, ., 2, ., 1, ., 3	0.7048	0.7873	0.6679	yes	N/A
Q9SU63	AL2B4_ARATH	1, ., 2, ., 1, ., 3	0.6189	0.7873	0.6468	yes	N/A

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.2.1	0.963

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	442
cd07141	481	cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retin	0.0
cd07091	476	cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH	0.0
cd07142	476	cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogen	0.0
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	0.0
pfam00171	459	pfam00171, Aldedh, Aldehyde dehydrogenase family	0.0
cd07143	481	cd07143, ALDH_AldA_AN0554, Aspergillus nidulans al	1e-175
cd07078	432	cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrog	1e-174
cd07112	462	cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+	1e-169
cd07144	484	cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisi	1e-165
cd07114	457	cd07114, ALDH_DhaS, Uncharacterized Candidatus pel	1e-164
cd07119	482	cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-de	1e-162
PLN02766	501	PLN02766, PLN02766, coniferyl-aldehyde dehydrogena	1e-162
cd07115	453	cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens	1e-160
COG1012	472	COG1012, PutA, NAD-dependent aldehyde dehydrogenas	1e-157
cd07093	455	cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogen	1e-153
cd07109	454	cd07109, ALDH_AAS00426, Uncharacterized Saccharopo	1e-150
PRK13252	488	PRK13252, PRK13252, betaine aldehyde dehydrogenase	1e-150
cd07090	457	cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethy	1e-146
cd07103	451	cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succina	1e-143
TIGR01804	467	TIGR01804, BADH, glycine betaine aldehyde dehydrog	1e-143
cd07559	480	cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophu	1e-142
cd07140	486	cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate	1e-139
cd07117	475	cd07117, ALDH_StaphAldA1, Uncharacterized Staphylo	1e-139
cd07118	454	cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbos	1e-135
cd07110	456	cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehy	1e-135
PRK13473	475	PRK13473, PRK13473, gamma-aminobutyraldehyde dehyd	1e-132
cd07111	480	cd07111, ALDH_F16, Aldehyde dehydrogenase family 1	1e-131
cd07092	450	cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-d	1e-130
cd07089	459	cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-	1e-129
cd07139	471	cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculo	1e-128
cd07138	466	cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-ox	1e-128
cd07097	473	cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+	1e-128
cd06534	367	cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehyd	1e-125
cd07106	446	cd07106, ALDH_AldA-AAD23400, Streptomyces aureofac	1e-124
PLN02467	503	PLN02467, PLN02467, betaine aldehyde dehydrogenase	1e-121
cd07107	456	cd07107, ALDH_PhdK-like, Nocardioides 2-carboxyben	1e-121
cd07104	431	cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)	1e-119
cd07088	468	cd07088, ALDH_LactADH-AldA, Escherichia coli lacta	1e-119
cd07131	478	cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candi	1e-118
cd07108	457	cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-d	1e-118
PRK09847	494	PRK09847, PRK09847, gamma-glutamyl-gamma-aminobuty	1e-116
cd07149	453	cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) wi	1e-115
cd07145	456	cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcu	1e-113
PLN02278	498	PLN02278, PLN02278, succinic semialdehyde dehydrog	1e-110
TIGR02299	488	TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate	1e-110
cd07116	479	cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD	1e-110
cd07150	451	cd07150, ALDH_VaniDH_like, Pseudomonas putida vani	1e-109
cd07113	477	cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dep	1e-108
cd07086	478	cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha	1e-108
TIGR01780	448	TIGR01780, SSADH, succinate-semialdehyde dehydroge	1e-106
cd07124	512	cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-	1e-105
cd07099	453	cd07099, ALDH_DDALDH, Methylomonas sp	1e-103
TIGR03216	481	TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semia	1e-101
cd07120	455	cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida al	1e-99
cd07151	465	cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxyb	5e-99
cd07100	429	cd07100, ALDH_SSADH1_GabD1, Mycobacterium tubercul	7e-99
cd07152	443	cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde	7e-99
cd07094	453	cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NA	2e-95
PRK03137	514	PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehy	8e-94
cd07105	432	cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogena	5e-93
PRK09407	524	PRK09407, gabD2, succinic semialdehyde dehydrogena	2e-92
cd07147	452	cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase f	6e-92
PRK10090	409	PRK10090, PRK10090, aldehyde dehydrogenase A; Prov	9e-91
cd07102	452	cd07102, ALDH_EDX86601, Uncharacterized aldehyde d	3e-90
cd07101	454	cd07101, ALDH_SSADH2_GabD2, Mycobacterium tubercul	6e-90
cd07146	451	cd07146, ALDH_PhpJ, Streptomyces putative phosphon	3e-88
cd07082	473	cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-ph	2e-87
cd07085	478	cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyd	6e-86
TIGR03374	472	TIGR03374, ABALDH, 1-pyrroline dehydrogenase	6e-85
PRK11241	482	PRK11241, gabD, succinate-semialdehyde dehydrogena	1e-84
cd07098	465	cd07098, ALDH_F15-22, Aldehyde dehydrogenase famil	4e-84
TIGR01237	511	TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carb	1e-80
TIGR04284	480	TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase,	4e-76
cd07130	474	cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-amin	7e-73
TIGR03250	472	TIGR03250, PhnAcAld_DH, putative phosphonoacetalde	3e-69
PRK09406	457	PRK09406, gabD1, succinic semialdehyde dehydrogena	3e-63
cd07148	455	cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL031	8e-63
cd07134	433	cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehy	2e-62
cd07087	426	cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily:	1e-60
cd07095	431	cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-sem	7e-59
cd07083	500	cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent	2e-58
cd07125	518	cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-car	2e-57
cd07133	434	cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehyd	5e-56
TIGR01722	477	TIGR01722, MMSDH, methylmalonic acid semialdehyde	1e-55
cd07136	449	cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldeh	4e-55
PRK13968	462	PRK13968, PRK13968, putative succinate semialdehyd	1e-52
PLN00412	496	PLN00412, PLN00412, NADP-dependent glyceraldehyde-	4e-52
cd07135	436	cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisia	6e-52
PRK09457	487	PRK09457, astD, succinylglutamic semialdehyde dehy	1e-51
TIGR01238	500	TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carb	3e-50
PRK11905	1208	PRK11905, PRK11905, bifunctional proline dehydroge	3e-50
COG4230	769	COG4230, COG4230, Delta 1-pyrroline-5-carboxylate	1e-49
TIGR03240	484	TIGR03240, arg_catab_astD, succinylglutamic semial	4e-49
PRK11904	1038	PRK11904, PRK11904, bifunctional proline dehydroge	2e-48
PTZ00381	493	PTZ00381, PTZ00381, aldehyde dehydrogenase family	1e-46
PLN02315	508	PLN02315, PLN02315, aldehyde dehydrogenase family	3e-46
PRK11809	1318	PRK11809, putA, trifunctional transcriptional regu	2e-45
PLN02419	604	PLN02419, PLN02419, methylmalonate-semialdehyde de	4e-44
cd07132	443	cd07132, ALDH_F3AB, Aldehyde dehydrogenase family	4e-43
TIGR01236	532	TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carb	5e-43
cd07123	522	cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-ca	1e-42
cd07137	432	cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase	3e-33
cd07128	513	cd07128, ALDH_MaoC-N, N-terminal domain of the mon	6e-29
PLN02203	484	PLN02203, PLN02203, aldehyde dehydrogenase	7e-26
PRK11563	675	PRK11563, PRK11563, bifunctional aldehyde dehydrog	2e-25
PRK11903	521	PRK11903, PRK11903, aldehyde dehydrogenase; Provis	4e-25
cd07084	442	cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+	3e-24
TIGR02278	663	TIGR02278, PaaN-DH, phenylacetic acid degradation	3e-22
PLN02174	484	PLN02174, PLN02174, aldehyde dehydrogenase family	4e-22
cd07129	454	cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdeh	3e-18
cd07077	397	cd07077, ALDH-like, NAD(P)+-dependent aldehyde deh	2e-12
cd07126	489	cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carb	5e-08
cd07081	439	cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acyla	3e-07
cd07122	436	cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldeh	3e-06
cd07121	429	cd07121, ALDH_EutE, Ethanolamine utilization prote	7e-06
TIGR02288	551	TIGR02288, PaaN_2, phenylacetic acid degradation p	8e-06
cd07127	549	cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradat	1e-05
PLN02466	538	PLN02466, PLN02466, aldehyde dehydrogenase family	2e-04

>gnl|CDD|143459 cd07141, ALDH_F1AB_F2_RALDH1, NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

 Score =  689 bits (1779), Expect = 0.0
 Identities = 258/348 (74%), Positives = 299/348 (85%), Gaps = 1/348 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +SLETLDNGKP++ SY VD+  +++ LRYYAG+ADKIHGKTIP++GDFF YTRHEPVGVC
Sbjct: 90  ASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVC 149

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+APALA GNT+VLKPAEQTPLTAL + +LI EAG P GVVN+VP
Sbjct: 150 GQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVP 209

Query: 170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           GYG  AGAA+  HP +DKVAFTGSTEVGKL+QQ +G SNLKR TLELGGKSPNI+FADAD
Sbjct: 210 GYGPTAGAAISSHPDIDKVAFTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADAD 269

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD AVE AH  LFFNMGQCCCAGSRTFVQ++IYDEFV RS ERAK+R VG+PFD   EQG
Sbjct: 270 LDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQG 329

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQID+EQ  KILE IESGK +GA+L  GG R GDKG+++QPTVF++V DDM+IA+EEIFG
Sbjct: 330 PQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFG 389

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           PVQQ+ +F +I+EVIERANN+ YGLAAAVFTKD+DK    +  LRAGT
Sbjct: 390 PVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGT 437

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. Length = 481

>gnl|CDD|143410 cd07091, ALDH_F1-2_Ald2-like, ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

 Score =  642 bits (1659), Expect = 0.0
 Identities = 230/348 (66%), Positives = 282/348 (81%), Gaps = 1/348 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LE+LDNGKP   S   DV  S++ LRYYAG+ADKI GKTIPI+G+F AYTR EP+GVC
Sbjct: 86  AALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVC 145

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLMLAWK+APALA GNT+VLKPAEQTPL+AL +  LI EAG P GVVNIVP
Sbjct: 146 GQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVP 205

Query: 170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDK+AFTGST VG+ + + +  SNLK+ TLELGGKSPNI+F DAD
Sbjct: 206 GFGPTAGAAISSHMDVDKIAFTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDAD 265

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD AVE A FG+FFN GQCCCAGSR FVQ++IYDEFV +   RA++R VGDPFD +  QG
Sbjct: 266 LDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQG 325

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+ K Q DKIL +IESGK +GA L+ GG R G KG+++QPTVF +V+DDMKIA+EEIFG
Sbjct: 326 PQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFG 385

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           PV  +++F + +EVIERAN+++YGLAA VFTKD++K   V++ L+AGT
Sbjct: 386 PVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGT 433

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. Also included in this subfamily is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial, homotetramers that oxidize acetaldehyde and glycolaldehyde, as well as, the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Also included is the AldA aldehyde dehydrogenase of Aspergillus nidulans (locus AN0554), the aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) of Saccharomyces cerevisiae, and other similar sequences. Length = 476

>gnl|CDD|143460 cd07142, ALDH_F2BC, Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

 Score =  560 bits (1446), Expect = 0.0
 Identities = 223/349 (63%), Positives = 276/349 (79%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LET DNGKPY  +   +V  + R  RYYAG+ADKIHG T+P +G    YT HEP+GV 
Sbjct: 86  AALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVV 145

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALA GNTIVLKPAEQTPL+AL    L AEAG+P+GV+NIV 
Sbjct: 146 GQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVT 205

Query: 170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTEVGK++ Q +  SNLK  TLELGGKSP I+  DAD
Sbjct: 206 GFGPTAGAAIASHMDVDKVAFTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDAD 265

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFV ++IYDEFV ++  RA +R VGDPF   VEQG
Sbjct: 266 VDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQG 325

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+DKEQ +KIL +IE GK +GA L+ GG R G KG+Y+QPT+F++V+DDMKIAR+EIFG
Sbjct: 326 PQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFG 385

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQ +++F +++EVI+RANNS YGLAA VF+K++D  N +++ L+AGT+
Sbjct: 386 PVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTV 434

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde. Length = 476

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score =  528 bits (1362), Expect = 0.0
 Identities = 215/349 (61%), Positives = 263/349 (75%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LET DNGKPY  S   ++    R  RYYAG+ADKIHG T+P +G     T HEP+GV 
Sbjct: 140 AALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVA 199

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALA GNTIVLK AEQTPL+AL    L+ EAG+P GV+N+V 
Sbjct: 200 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVS 259

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAAL  H  VDK+AFTGST+ GK+V + +  SNLK  TLELGGKSP I+  DAD
Sbjct: 260 GFGPTAGAALASHMDVDKLAFTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDAD 319

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFV + +YDEFV ++  RA +R VGDPF   VEQG
Sbjct: 320 VDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQG 379

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQID EQ +KIL +I+SG   GA L  GG R G KG+Y+QPTVF+NV+DDM IA++EIFG
Sbjct: 380 PQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFG 439

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQ +++F  ++EVI RANN+ YGLAA VFT++LD  N +++ LR GT+
Sbjct: 440 PVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTV 488

Length = 538

>gnl|CDD|215767 pfam00171, Aldedh, Aldehyde dehydrogenase family

 Score =  523 bits (1350), Expect = 0.0
 Identities = 196/347 (56%), Positives = 250/347 (72%), Gaps = 3/347 (0%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           LETL+ GKP   +   +V  ++ TLRYYAG A K+ G+T+P +    AYTR EP+GV G 
Sbjct: 74  LETLETGKPLAEAR-GEVPRAIDTLRYYAGLARKLEGETLPSDPGVLAYTRREPLGVVGA 132

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I PWNFPLL+ AWKIAPALA GNT+VLKP+E TPLTAL +  L  EAG+P GV+N+V G 
Sbjct: 133 ITPWNFPLLLAAWKIAPALAAGNTVVLKPSELTPLTALLLAELFEEAGLPPGVLNVVTGS 192

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G + G ALV+HP VDKV+FTGSTEVG+ + + + A NLKR TLELGGK+P I+F DADLD
Sbjct: 193 GSEVGDALVEHPDVDKVSFTGSTEVGRRIAK-AAAKNLKRVTLELGGKNPLIVFDDADLD 251

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
           AAVEGA FG F N GQ C AGSR  V ++IYDEFV R  E AK   VGDP D + + GP 
Sbjct: 252 AAVEGAVFGAFGNAGQVCTAGSRLLVHESIYDEFVERLVEAAKSLKVGDPLDPDTDIGPL 311

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPV 350
           I K+Q +++L +IE  K +GA+L+ GG    +KG++V+PTV A+V  DM+IA+EEIFGPV
Sbjct: 312 ISKKQRERVLSYIEDAKEEGAKLLCGGEAGLEKGYFVEPTVLADVTPDMRIAQEEIFGPV 371

Query: 351 QQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             +I F   +E IE AN+++YGLAA VFT DL++   V + L AG +
Sbjct: 372 LSVIPFKDEDEAIELANDTEYGLAAGVFTNDLERALRVARRLEAGMV 418

This family of dehydrogenases act on aldehyde substrates. Members use NADP as a cofactor. The family includes the following members: The prototypical members are the aldehyde dehydrogenases EC:1.2.1.3. Succinate-semialdehyde dehydrogenase EC:1.2.1.16. Lactaldehyde dehydrogenase EC:1.2.1.22. Benzaldehyde dehydrogenase EC:1.2.1.28. Methylmalonate-semialdehyde dehydrogenase EC:1.2.1.27. Glyceraldehyde-3-phosphate dehydrogenase EC:1.2.1.9. Delta-1-pyrroline-5-carboxylate dehydrogenase EC: 1.5.1.12. Acetaldehyde dehydrogenase EC:1.2.1.10. Glutamate-5-semialdehyde dehydrogenase EC:1.2.1.41. This family also includes omega crystallin, an eye lens protein from squid and octopus that has little aldehyde dehydrogenase activity. Length = 459

>gnl|CDD|143461 cd07143, ALDH_AldA_AN0554, Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

 Score =  498 bits (1284), Expect = e-175
 Identities = 201/348 (57%), Positives = 260/348 (74%), Gaps = 1/348 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +S+E LDNGK +  +  VDV+ S  T RYY G+ADKIHG+ I  +     YTRHEP+GVC
Sbjct: 89  ASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVC 148

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWKIAPALA GNTIVLKP+E TPL+AL +  LI EAG P GV+N+V 
Sbjct: 149 GQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVS 208

Query: 170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           GYG   G A+  H  +DKVAFTGST VG+ V + +  SNLK+ TLELGGKSPNI+F DAD
Sbjct: 209 GYGRTCGNAISSHMDIDKVAFTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDAD 268

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           L++AV    +G+FFN GQ CCAGSR +VQ+ IYD+FV R  E+AK+  VGDPF  +  QG
Sbjct: 269 LESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQG 328

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+ + Q ++I+ +IESGK++GA +  GG R G++G++++PT+F +V +DMKI +EEIFG
Sbjct: 329 PQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFG 388

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           PV  +I+F + EE I+RAN+S YGLAAAVFT +++    V   L+AGT
Sbjct: 389 PVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGT 436

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD. Length = 481

>gnl|CDD|143397 cd07078, ALDH, NAD(P)+ dependent aldehyde dehydrogenase family

 Score =  495 bits (1276), Expect = e-174
 Identities = 194/348 (55%), Positives = 244/348 (70%), Gaps = 5/348 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCG 110
           LETL+ GKP   +   +V  +  T RYYAG A ++HG+ IP  +    A  R EP+GV G
Sbjct: 43  LETLETGKPIEEAL-GEVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGVVG 101

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
            I PWNFPLL+ AWK+APALA GNT+VLKP+E TPLTAL +  L+AEAG+P GV+N+V G
Sbjct: 102 AITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTG 161

Query: 171 YGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
            GD  GAAL  HP VDK++FTGST VGK + + + A NLKR TLELGGKSP I+F DADL
Sbjct: 162 DGDEVGAALASHPRVDKISFTGSTAVGKAIMR-AAAENLKRVTLELGGKSPLIVFDDADL 220

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           DAAV+GA FG F N GQ C A SR  V ++IYDEFV R  ER K   VG+P D + + GP
Sbjct: 221 DAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGP 280

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGR-AGDKGFYVQPTVFANVRDDMKIAREEIFG 348
            I   Q+D++L +IE  K++GA+L+ GG R  G KG++V PTV  +V  DM IA+EEIFG
Sbjct: 281 LISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEIFG 340

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           PV  +I F   EE IE AN+++YGLAA VFT+DL++   V + L AGT
Sbjct: 341 PVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGT 388

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-like) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. Length = 432

>gnl|CDD|143430 cd07112, ALDH_GABALDH-PuuC, Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

 Score =  483 bits (1246), Expect = e-169
 Identities = 191/349 (54%), Positives = 240/349 (68%), Gaps = 4/349 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           LETLD GKP + + +VDV  +  T R+YA   DK++G+  P   D  A    EP+GV G 
Sbjct: 71  LETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVVGA 130

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           ++PWNFPLLM AWKIAPALA GN++VLKPAEQ+PLTAL +  L  EAG+P GV+N+VPG+
Sbjct: 131 VVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGF 190

Query: 172 GD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA-DL 229
           G  AG AL  H  VD +AFTGSTEVG+   + SG SNLKR  LE GGKSPNI+FADA DL
Sbjct: 191 GHTAGEALGLHMDVDALAFTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDL 250

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           DAA E A  G+F+N G+ C AGSR  V ++I DEF+ +    A+    GDP D     G 
Sbjct: 251 DAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGA 310

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGR--AGDKGFYVQPTVFANVRDDMKIAREEIF 347
            + +   DK+L +IESGK++GA+LVAGG R      GF+V+PTVF  V  DM+IAREEIF
Sbjct: 311 LVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREEIF 370

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           GPV  +I F S EE +  AN+S YGLAA+V+T DL + + V + LRAGT
Sbjct: 371 GPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGT 419

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD. Length = 462

>gnl|CDD|143462 cd07144, ALDH_ALD2-YMR170C, Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

 Score =  472 bits (1217), Expect = e-165
 Identities = 195/372 (52%), Positives = 260/372 (69%), Gaps = 14/372 (3%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCG 110
           ++E LD+GKPY+ +   D++  +  +RYYAG+ADKI GKTIP + +  AYT HEP GVCG
Sbjct: 90  AIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVCG 149

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
           QIIPWN+PL M AWK+APALA GNT+V+KPAE TPL+ L    L+ EAG P GVVNI+PG
Sbjct: 150 QIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPG 209

Query: 171 YGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           YG  AG+AL +HP VDK+AFTGST  G+LV + + A NLK  TLE GGKSP ++F DADL
Sbjct: 210 YGAVAGSALAEHPDVDKIAFTGSTATGRLVMKAA-AQNLKAVTLECGGKSPALVFEDADL 268

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRT-VGDPFDLNVEQG 288
           D AV+ A  G+ +N GQ C A SR +VQ++IYD+FV +  E  K+   VG PFD +   G
Sbjct: 269 DQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVG 328

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGG---GRAGDKGFYVQPTVFANVRDDMKIAREE 345
           PQ+ K Q D++L +IE GK +GA+LV GG        KG+++ PT+F +V  DM+I +EE
Sbjct: 329 PQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKEE 388

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE 405
           IFGPV  + +F + EE I++AN++ YGLAAAVFTKD+ + + V + L AG +        
Sbjct: 389 IFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVW------- 441

Query: 406 VIERANNSDYGL 417
            I  +N+SD G+
Sbjct: 442 -INSSNDSDVGV 452

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD. Length = 484

>gnl|CDD|143432 cd07114, ALDH_DhaS, Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

 Score =  470 bits (1212), Expect = e-164
 Identities = 175/352 (49%), Positives = 230/352 (65%), Gaps = 10/352 (2%)

Query: 52  LETLDNGKPYN-MSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGVC 109
           LET DNGK        V   Y     RYYAG ADKI G  IP++ GD+  +TR EP+GV 
Sbjct: 66  LETRDNGKLIRETRAQV--RYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLGVV 123

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             I PWN PLL+LA K+APALA GNT+VLKP+E TP + L +  L  EAG P GVVN+V 
Sbjct: 124 AAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVT 183

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G + G ALV+HP V K+AFTG TE G+ + + + A NL   TLELGGKSPNI+F DAD
Sbjct: 184 GFGPETGEALVEHPLVAKIAFTGGTETGRHIARAA-AENLAPVTLELGGKSPNIVFDDAD 242

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LDAAV G   G+F   GQ C AGSR  VQ +IYDEFV R   RA+   VGDP D   + G
Sbjct: 243 LDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMG 302

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIARE 344
           P   + Q++K+  ++   + +GA+++ GG R        G++ +PT+ A+V +DM+IA+E
Sbjct: 303 PLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIAQE 362

Query: 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           E+FGPV  +I F   EE I  AN+S+YGLAA ++T+DL + + V + + AGT
Sbjct: 363 EVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGT 414

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD. Length = 457

>gnl|CDD|143437 cd07119, ALDH_BADH-GbsA, Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

 Score =  466 bits (1202), Expect = e-162
 Identities = 174/351 (49%), Positives = 234/351 (66%), Gaps = 7/351 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           LETL+ GK    S   D++      RYYAG A K  G+   +     + T  EPVGVCG 
Sbjct: 82  LETLNTGKTLRESEI-DIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVCGL 140

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I PWN+PLL  AWK+APALA GNT+V+KP+E TPLT +A+  LI EAG+P GVVN+V G 
Sbjct: 141 ITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGS 200

Query: 172 GD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G   GA L + P VD V+FTG T  G+ + + + A N+K+  LELGGK+PNI+FADAD +
Sbjct: 201 GATVGAELAESPDVDLVSFTGGTATGRSIMR-AAAGNVKKVALELGGKNPNIVFADADFE 259

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
            AV+ A  G+FFN GQ C AGSR  V+++I+D+FVA   ERAK+  +G+  D + E GP 
Sbjct: 260 TAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPL 319

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAGD----KGFYVQPTVFANVRDDMKIAREEI 346
           +  E  +K+L +I+ GK +GA+LV GG R       KG++V+PT+F +V   M+I +EEI
Sbjct: 320 VSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQEEI 379

Query: 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           FGPV  + RF + EE I  AN++ YGLA AV+TKD+ + N V + LRAGT+
Sbjct: 380 FGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTV 430

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde. Length = 482

>gnl|CDD|215410 PLN02766, PLN02766, coniferyl-aldehyde dehydrogenase

 Score =  465 bits (1198), Expect = e-162
 Identities = 191/349 (54%), Positives = 257/349 (73%), Gaps = 1/349 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++L+T+D GK + +  +VD+  +   LRYYAG ADKIHG+T+ ++     YT  EP+GV 
Sbjct: 103 AALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVV 162

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           G IIPWNFP  M   K+APALA G T+V+KPAEQTPL+AL    L   AG+P+GV+N+V 
Sbjct: 163 GHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVT 222

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKV+FTGSTEVG+ + Q +  SNLK+ +LELGGKSP +IF DAD
Sbjct: 223 GFGPTAGAAIASHMDVDKVSFTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDAD 282

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AV+ A  G+F+N G+ C A SR +VQ+ IYDEFV +  E+AK   VGDPFD    QG
Sbjct: 283 VDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQG 342

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+DK+Q +KIL +IE GK +GA L+ GG   GDKG+Y++PT+F +V +DMKIA++EIFG
Sbjct: 343 PQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFG 402

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV  L++F ++EE I++ANN+ YGLAA + TKDLD  N V++ +RAGT+
Sbjct: 403 PVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTI 451

Length = 501

>gnl|CDD|143433 cd07115, ALDH_HMSADH_HapE, Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

 Score =  460 bits (1186), Expect = e-160
 Identities = 191/348 (54%), Positives = 253/348 (72%), Gaps = 2/348 (0%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           + LE+LD GKP   +  +DV  +  T RYYAG+ADKI G+ IP+ G F  YT  EPVGV 
Sbjct: 62  ARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVV 121

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           G I+PWNFPL+  AWK+APALA GNT+VLKPAE TPL+AL +  L+AEAG P GV+N+V 
Sbjct: 122 GAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVT 181

Query: 170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G+ AGAALV+HP VDK+ FTGST VG+ + QG+ A NLKR +LELGGKS NI+FADAD
Sbjct: 182 GFGEVAGAALVEHPDVDKITFTGSTAVGRKIMQGA-AGNLKRVSLELGGKSANIVFADAD 240

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LDAAV  A  G+F+N GQ C AGSR  V ++IYDEF+ R    A+    GDP D   + G
Sbjct: 241 LDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMG 300

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           P + + Q D++L++++ G+ +GA+L+ GG R G +GF+V+PT+FA V  +M+IA+EEIFG
Sbjct: 301 PLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFG 360

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           PV  ++RF   EE +  AN ++YGLAA V+T+DL + + V   L+AGT
Sbjct: 361 PVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGT 408

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD. Length = 453

>gnl|CDD|223944 COG1012, PutA, NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

 Score =  452 bits (1166), Expect = e-157
 Identities = 183/346 (52%), Positives = 240/346 (69%), Gaps = 5/346 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           L TL+ GKP + +   ++  +   +RYYA  A ++ G+TIP +    A  R EP+GV G 
Sbjct: 81  LITLETGKPISEAR-GEIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGVVGA 139

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I PWNFPL + AWK+APALA GNT+VLKP+EQTPL+ALA+  L AEAG+P GV+N+V G 
Sbjct: 140 ITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGG 199

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G + G ALV HP VD ++FTGST VG+ +   + A+NLK  TLELGGKSP I+  DADLD
Sbjct: 200 GAEVGDALVAHPDVDAISFTGSTAVGRAIAAAA-AANLKPVTLELGGKSPAIVLEDADLD 258

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
           AAV+ A FG FFN GQ C A SR  V +++YDEFV R   RA    VGDP D + + GP 
Sbjct: 259 AAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVERLVARAASLKVGDPLDPSTDLGPL 318

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPV 350
           I +EQ+D++  +IE   ++GA+L+AGG R G  G++V+PT+   V  DM+IAREEIFGPV
Sbjct: 319 ISEEQLDRVEGYIEDAVAEGARLLAGGKRPG--GYFVEPTILEGVTPDMRIAREEIFGPV 376

Query: 351 QQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
             +IRF   EE IE AN+++YGLAAA+FT+DL +   V + L AG 
Sbjct: 377 LPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGM 422

Length = 472

>gnl|CDD|143412 cd07093, ALDH_F8_HMSADH, Human aldehyde dehydrogenase family 8 member A1-like

 Score =  442 bits (1139), Expect = e-153
 Identities = 173/351 (49%), Positives = 239/351 (68%), Gaps = 6/351 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           LE+LD GKP  ++ + D+  +    R++A +  ++ G++ P +G    Y   +PVGV G 
Sbjct: 64  LESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVAGL 123

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I PWN PL++L WKIAPALA GNT+VLKP+E TPLTA  +  L  EAG+P GVVN+V G+
Sbjct: 124 ITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGF 183

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G +AGAALV HP VD ++FTG T  G+ + + + A NLK  +LELGGK+PNI+FADADLD
Sbjct: 184 GPEAGAALVAHPDVDLISFTGETATGRTIMR-AAAPNLKPVSLELGGKNPNIVFADADLD 242

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
            AV+ A    F N G+ C AGSR  VQ +IYDEF+ R  ERAK   VGDP D + E GP 
Sbjct: 243 RAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPL 302

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIAREEI 346
           I KE ++K+L ++E  +++GA ++ GGGR      + G++V+PTV   + +D ++A+EEI
Sbjct: 303 ISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQEEI 362

Query: 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           FGPV  +I F   EE IE AN++ YGLAA V+T+DL + + V + L AGT+
Sbjct: 363 FGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTV 413

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone. Length = 455

>gnl|CDD|143427 cd07109, ALDH_AAS00426, Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

 Score =  434 bits (1118), Expect = e-150
 Identities = 166/350 (47%), Positives = 224/350 (64%), Gaps = 7/350 (2%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           + LE+LD GKP   + + DVE + R   YY G ADK+HG+TIP+   +F YT  EP GV 
Sbjct: 63  ARLESLDTGKPLTQARA-DVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGVT 121

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           G IIPWN+PL +    +APALA GN +V+KPAE  PLTAL +  L  EAG+P G +N+V 
Sbjct: 122 GHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVT 181

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G G +AGAALV HPGVD ++FTGS E G  V + + A N+   TLELGGKSP I+FADAD
Sbjct: 182 GLGAEAGAALVAHPGVDHISFTGSVETGIAVMR-AAAENVVPVTLELGGKSPQIVFADAD 240

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           L+AA+      +  N GQ C AGSR  V  +IYDE + R  ER +   VG   + + + G
Sbjct: 241 LEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLERLVERFRALRVGPGLE-DPDLG 299

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD---KGFYVQPTVFANVRDDMKIAREE 345
           P I  +Q+D++  F+   +++GA++VAGG  A      G++V PT+  +V  D ++A+EE
Sbjct: 300 PLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQEE 359

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           IFGPV  ++ F    E I  AN +DYGL A V+T+D D+   V + LRAG
Sbjct: 360 IFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAG 409

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD. Length = 454

>gnl|CDD|183918 PRK13252, PRK13252, betaine aldehyde dehydrogenase; Provisional

 Score =  435 bits (1120), Expect = e-150
 Identities = 169/352 (48%), Positives = 218/352 (61%), Gaps = 5/352 (1%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLD GKP   +  VD+      L YYAG A  + G+ IP+ G  F YTR EP+GVC
Sbjct: 87  AALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVC 146

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             I  WN+P+ +  WK APALA GN ++ KP+E TPLTAL +  +  EAG+P+GV N+V 
Sbjct: 147 AGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQ 206

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G G  GA L +HP + KV+FTG    GK V   + AS LK  T+ELGGKSP I+F DADL
Sbjct: 207 GDGRVGAWLTEHPDIAKVSFTGGVPTGKKVMAAAAAS-LKEVTMELGGKSPLIVFDDADL 265

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           D A + A    F++ GQ C  G+R FVQ +I   F AR  ER +R  +GDP D     GP
Sbjct: 266 DRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGP 325

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGR----AGDKGFYVQPTVFANVRDDMKIAREE 345
            +     DK+L +IE GK++GA+L+ GG R        G +V PTVF +  DDM I REE
Sbjct: 326 LVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREE 385

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           IFGPV  ++ F   +EVI RAN+++YGLAA VFT DL + + V   L AG  
Sbjct: 386 IFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGIC 437

Length = 488

>gnl|CDD|143409 cd07090, ALDH_F9_TMBADH, NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

 Score =  425 bits (1094), Expect = e-146
 Identities = 174/351 (49%), Positives = 228/351 (64%), Gaps = 7/351 (1%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCG 110
            LET+DNGKP   +  VD++ S   L YYAG A  + G+ +P+ G  FAYTR EP+GVC 
Sbjct: 63  RLETIDNGKPIEEA-RVDIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVCA 121

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
            I  WN+P+ + +WK APALA GN +V KP+  TPLTAL +  ++ EAG+P+GV N+V G
Sbjct: 122 GIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQG 181

Query: 171 YGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
            G+ G  L +HP V KV+FTGS   GK V   + A  +K  TLELGGKSP IIF DADL+
Sbjct: 182 GGETGQLLCEHPDVAKVSFTGSVPTGKKVMS-AAAKGIKHVTLELGGKSPLIIFDDADLE 240

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
            AV GA    F + GQ C  G+R FVQ +I DEF  R  ER K+  +GDP D + + G  
Sbjct: 241 NAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGAL 300

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAG-----DKGFYVQPTVFANVRDDMKIAREE 345
           I +E ++K+L +IES K +GA+++ GG R       + GFYV P V  +  DDM I REE
Sbjct: 301 ISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVREE 360

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           IFGPV  ++ F + EEVI RAN++ YGLAA VFT+DL + + V   L+AGT
Sbjct: 361 IFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGT 411

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis. Length = 457

>gnl|CDD|143421 cd07103, ALDH_F5_SSADH_GabD, Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

 Score =  416 bits (1071), Expect = e-143
 Identities = 159/344 (46%), Positives = 219/344 (63%), Gaps = 4/344 (1%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCGQI 112
           TL+ GKP   +   +V+Y+   L ++A  A +I+G+TIP            +PVGV   I
Sbjct: 66  TLEQGKPLAEAR-GEVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGVVAAI 124

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG-Y 171
            PWNFP  M+  KIAPALA G T+VLKPAE+TPL+ALA+  L  EAG+P GV+N+V G  
Sbjct: 125 TPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSP 184

Query: 172 GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
            + G AL   P V K++FTGST VGKL+   + A  +KR +LELGG +P I+F DADLD 
Sbjct: 185 AEIGEALCASPRVRKISFTGSTAVGKLLMAQA-ADTVKRVSLELGGNAPFIVFDDADLDK 243

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           AV+GA    F N GQ C   +R +V ++IYDEFV +  ER K+  VG+  D   + GP I
Sbjct: 244 AVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLI 303

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQ 351
           ++  ++K+   +E   ++GA+++ GG R G  G++ +PTV  +V DDM I  EE FGPV 
Sbjct: 304 NERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETFGPVA 363

Query: 352 QLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
            +I F + +EVI RAN++ YGLAA VFT+DL +   V + L AG
Sbjct: 364 PIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAG 407

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species. Length = 451

>gnl|CDD|200131 TIGR01804, BADH, glycine betaine aldehyde dehydrogenase

 Score =  416 bits (1070), Expect = e-143
 Identities = 176/353 (49%), Positives = 229/353 (64%), Gaps = 6/353 (1%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           + LETLD GK    +   D++       ++AG A  ++G+ IP+ G  FAYT  EP+GVC
Sbjct: 78  AKLETLDTGKTLQETIVADMDSGADVFEFFAGLAPALNGEIIPLGGPSFAYTIREPLGVC 137

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             I  WN+PL + +WKIAPALA GN +V KP+E TPLTAL V  ++ EAG+P+GV N+V 
Sbjct: 138 VGIGAWNYPLQIASWKIAPALAAGNAMVFKPSENTPLTALKVAEIMEEAGLPKGVFNVVQ 197

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G G + G  LV HP V KV+FTG    GK +   + A +LK  T+ELGGKSP I+F DAD
Sbjct: 198 GDGAEVGPLLVNHPDVAKVSFTGGVPTGKKI-MAAAAGHLKHVTMELGGKSPLIVFDDAD 256

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           L++AV+GA  G FF+ GQ C  G+R FV   I + F+AR  ER +R  +GDPFD   E G
Sbjct: 257 LESAVDGAMLGNFFSAGQVCSNGTRVFVHKKIKERFLARLVERTERIKLGDPFDEATEMG 316

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGR----AGDKGFYVQPTVFANVRDDMKIARE 344
           P I     DK+L +IE GK++GA L  GGGR        GF+V+PTVFA+  DDM I RE
Sbjct: 317 PLISAAHRDKVLSYIEKGKAEGATLATGGGRPENVGLQNGFFVEPTVFADCTDDMTIVRE 376

Query: 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           EIFGPV  ++ FS  +EVI RAN+++YGLA  VFT DL + + V   L AGT+
Sbjct: 377 EIFGPVMTVLTFSDEDEVIARANDTEYGLAGGVFTADLGRAHRVADQLEAGTV 429

Under osmotic stress, betaine aldehyde dehydrogenase oxidizes glycine betaine aldehyde into the osmoprotectant glycine betaine, via the second of two oxidation steps from exogenously supplied choline or betaine aldehyde. This choline-glycine betaine synthesis pathway can be found in gram-positive and gram-negative bacteria. In Escherichia coli, betaine aldehyde dehydrogenase (betB) is osmotically co-induced with choline dehydrogenase (betA) in the presence of choline. These dehydrogenases are located in a betaine gene cluster with the upstream choline transporter (betT) and transcriptional regulator (betI). Similar to E.coli, betaine synthesis in Staphylococcus xylosus is also influenced by osmotic stress and the presence of choline with genes localized in a functionally equivalent gene cluster. Organization of the betaine gene cluster in Sinorhizobium meliloti and Bacillus subtilis differs from that of E.coli by the absence of upstream choline transporter and transcriptional regulator homologues. Additionally, B.subtilis co-expresses a type II alcohol dehydrogenase with betaine aldehyde dehydrogenase instead of choline dehydrogenase as in E.coli, St.xylosus, and Si.meliloti. Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171) [Cellular processes, Adaptations to atypical conditions]. Length = 467

>gnl|CDD|143471 cd07559, ALDH_ACDHII_AcoD-like, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

 Score =  413 bits (1064), Expect = e-142
 Identities = 167/354 (47%), Positives = 227/354 (64%), Gaps = 12/354 (3%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
            ETLDNGKP   + + D+  ++   RY+AG      G    I+ D  +Y  HEP+GV GQ
Sbjct: 83  AETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVVGQ 142

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           IIPWNFPLLM AWK+APALA GNT+VLKPA QTPL+ L +  LI +  +P+GVVN+V G+
Sbjct: 143 IIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGF 201

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA--- 227
           G +AG  L  HP + K+AFTGST VG+L+ Q   A NL   TLELGGKSPNI F DA   
Sbjct: 202 GSEAGKPLASHPRIAKLAFTGSTTVGRLIMQ-YAAENLIPVTLELGGKSPNIFFDDAMDA 260

Query: 228 --DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
             D D   E    G  FN G+ C   SR  VQ++IYDEF+ R+ ER +   VG+P D   
Sbjct: 261 DDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPET 320

Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA----GDKGFYVQPTVFANVRDDMKI 341
             G Q+ K+Q++KIL +++ GK +GA+++ GG R      DKG++ +PT+     +DM+I
Sbjct: 321 MMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDMRI 380

Query: 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
            +EEIFGPV  +I F   EE I  AN+++YGL   V+T+D+++   V +G++ G
Sbjct: 381 FQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTG 434

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences. Length = 480

>gnl|CDD|143458 cd07140, ALDH_F1L_FTFDH, 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

 Score =  408 bits (1050), Expect = e-139
 Identities = 175/355 (49%), Positives = 240/355 (67%), Gaps = 7/355 (1%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN----GDFFAYTRHEP 105
           +++E+LD+G  Y ++    V  S++T RY+AG+ DKI GKTIPIN          T+ EP
Sbjct: 88  ATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREP 147

Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           +GVCG +IPWN+PL+MLAWK+A  LA GNT+VLKPA+ TPLTAL    L  +AG P+GV+
Sbjct: 148 IGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVI 207

Query: 166 NIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           NI+PG G   G  L  HP V K+ FTGST +GK + +    SNLK+ +LELGGKSP IIF
Sbjct: 208 NILPGSGSLVGQRLSDHPDVRKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIF 267

Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
           AD D+D AV      +FFN G+ C A  R FV+++I+DEFV R  E  K+  +GDP D +
Sbjct: 268 ADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRS 327

Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
            + GPQ  K  +DK++E+ E G  +GA LV GG +    GF+ +PTVF +V D M IA+E
Sbjct: 328 TDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKE 387

Query: 345 EIFGPVQQLIRF--SSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           E FGP+  + +F    ++ V++RAN+++YGLA+ VFTKD++K  YV+  L AGT+
Sbjct: 388 ESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTV 442

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids. Length = 486

>gnl|CDD|143435 cd07117, ALDH_StaphAldA1, Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

 Score =  406 bits (1044), Expect = e-139
 Identities = 173/349 (49%), Positives = 239/349 (68%), Gaps = 7/349 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           +ETLDNGKP   + +VD+  +    RY+AG      G    I+ D  +    EP+GV GQ
Sbjct: 83  VETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVVGQ 142

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           IIPWNFP LM AWK+APALA GNT+V+KP+  T L+ L +  +I +  +P+GVVNIV G 
Sbjct: 143 IIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGK 201

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G  +G  L+ HPG+DK+AFTGSTEVG+ V   + A  L   TLELGGKS NIIF DA+ D
Sbjct: 202 GSKSGEYLLNHPGLDKLAFTGSTEVGRDVAI-AAAKKLIPATLELGGKSANIIFDDANWD 260

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
            A+EGA  G+ FN GQ CCAGSR FVQ+ IYDEFVA+  E+ +   VG+P D + + G Q
Sbjct: 261 KALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQ 320

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGR----AGDKGFYVQPTVFANVRDDMKIAREEI 346
           ++K+Q+DKIL +++  K +GA+++ GG R      DKGF+++PT+  NV +DM++A+EEI
Sbjct: 321 VNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQEEI 380

Query: 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           FGPV  +I+F + +EVI+ AN+S+YGL   VFTKD+++   V + +  G
Sbjct: 381 FGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETG 429

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD. Length = 475

>gnl|CDD|143436 cd07118, ALDH_SNDH, Gluconobacter oxydans L-sorbosone dehydrogenase-like

 Score =  396 bits (1020), Expect = e-135
 Identities = 161/348 (46%), Positives = 230/348 (66%), Gaps = 5/348 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PINGDFFAYTRHEPVGVCG 110
           +ETL++GKP + +   ++E +    RY A  A  +HG +   +  D       EP+GV G
Sbjct: 66  IETLESGKPISQARG-EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIGVVG 124

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
            I PWNFP L+L+ K+  ALA G T+V+KP+E T  T L +  L+ EAG+P GVVNIV G
Sbjct: 125 IITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTG 184

Query: 171 YGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           YG   G A+ +HP VD V+FTGST VGK +   + A NLK+ +LELGGK+P I+FADADL
Sbjct: 185 YGATVGQAMTEHPDVDMVSFTGSTRVGKAIA-AAAARNLKKVSLELGGKNPQIVFADADL 243

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           DAA +   FG++FN G+CC +GSR  V ++I D FVA    R+++  VGDP D   + G 
Sbjct: 244 DAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGA 303

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGR-AGDKGFYVQPTVFANVRDDMKIAREEIFG 348
            I++ Q+ KI +++++G+++GA L+ GG R A   G + QPT+F +V  DM IAREEIFG
Sbjct: 304 IINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREEIFG 363

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           PV  ++ F +++E I  AN++ YGL+A V++KD+D    V + +RAGT
Sbjct: 364 PVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGT 411

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase. Length = 454

>gnl|CDD|143428 cd07110, ALDH_F10_BADH, Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

 Score =  395 bits (1016), Expect = e-135
 Identities = 174/351 (49%), Positives = 232/351 (66%), Gaps = 9/351 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK---TIPI-NGDFFAYTRHEPVG 107
           LE  DNGKP + + + DV+       YYA  A+++  K    +P+ + DF A  R EPVG
Sbjct: 64  LEARDNGKPLDEA-AWDVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRREPVG 122

Query: 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNI 167
           V G I PWNFPLLM AWK+APALA G T+VLKP+E T LT L +  + AEAG+P GV+N+
Sbjct: 123 VVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNV 182

Query: 168 VPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFAD 226
           V G GD AGA L  HPG+DK++FTGST  G  V Q + A ++K  +LELGGKSP I+F D
Sbjct: 183 VTGTGDEAGAPLAAHPGIDKISFTGSTATGSQVMQ-AAAQDIKPVSLELGGKSPIIVFDD 241

Query: 227 ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVE 286
           ADL+ AVE A FG F+N GQ C A SR  V ++I D F+ R    A+   VGDP +  V 
Sbjct: 242 ADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVR 301

Query: 287 QGPQIDKEQMDKILEFIESGKSQGAQLVAGGGR--AGDKGFYVQPTVFANVRDDMKIARE 344
            GP + + Q +K+L FI  GK +GA+L+ GG R    +KG+++ PTVFA+V  D +I RE
Sbjct: 302 LGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRIWRE 361

Query: 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           EIFGPV  +  F++ +E I  AN+S+YGLAAAV ++D ++ + V + L AG
Sbjct: 362 EIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAG 412

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine. Length = 456

>gnl|CDD|237391 PRK13473, PRK13473, gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  388 bits (999), Expect = e-132
 Identities = 149/349 (42%), Positives = 211/349 (60%), Gaps = 5/349 (1%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPINGDFFAYTRHEPVGVC 109
            LE+L+ GKP +++ + ++   +   R++AG A  + GK          +  R +PVGV 
Sbjct: 83  RLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGVV 142

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             I PWN+PL+M AWK+APALA GNT+VLKP+E TPLTAL +  L A+  +P GV+N+V 
Sbjct: 143 ASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVT 201

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G G   G ALV HP V  V+ TGS   GK V   + A ++KRT LELGGK+P I+F DAD
Sbjct: 202 GRGATVGDALVGHPKVRMVSLTGSIATGKHVLS-AAADSVKRTHLELGGKAPVIVFDDAD 260

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LDA VEG     ++N GQ C A  R + Q  IYD+ VA+         VGDP D + E G
Sbjct: 261 LDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELG 320

Query: 289 PQIDKEQMDKILEFIESGKSQG-AQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           P I     D++  F+E  K+ G  ++V GG     KG+Y +PT+ A  R D +I + E+F
Sbjct: 321 PLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREVF 380

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           GPV  +  F   ++ +  AN+SDYGLA++V+T+D+ + + V+  L+ G 
Sbjct: 381 GPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGC 429

Length = 475

>gnl|CDD|143429 cd07111, ALDH_F16, Aldehyde dehydrogenase family 16A1-like

 Score =  385 bits (992), Expect = e-131
 Identities = 167/345 (48%), Positives = 223/345 (64%), Gaps = 11/345 (3%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           LE+LDNGKP   S   D+    R   ++AG+A  +                 +PVGV GQ
Sbjct: 104 LESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLD----------TELAGWKPVGVVGQ 153

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I+PWNFPLLMLAWKI PALA GNT+VLKPAE TPLTAL    + AEAG+P GV+NIV G 
Sbjct: 154 IVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGN 213

Query: 172 GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
           G  G+AL  HPGVDKVAFTGSTEVG+ +++ + A   K+ +LELGGKSP I+F DADLD+
Sbjct: 214 GSFGSALANHPGVDKVAFTGSTEVGRALRR-ATAGTGKKLSLELGGKSPFIVFDDADLDS 272

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           AVEG    ++FN GQ CCAGSR  VQ+++ +E + +  ER     VGDP D  ++ G  +
Sbjct: 273 AVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIV 332

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQ 351
           D  Q+ +I E +E G+++GA +   G     KG +  PT+F NV    +IA+EEIFGPV 
Sbjct: 333 DPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGPVL 392

Query: 352 QLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
            ++ F + +E +  ANN+ YGLAA+V++++L     V   L+AG 
Sbjct: 393 VVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGV 437

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence. Length = 480

>gnl|CDD|143411 cd07092, ALDH_ABALDH-YdcW, Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

 Score =  382 bits (983), Expect = e-130
 Identities = 156/350 (44%), Positives = 213/350 (60%), Gaps = 11/350 (3%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFA----YTRHEPVG 107
           LE+ + GKP ++    ++  ++   R++AG A  + G   P  G++        R EP+G
Sbjct: 64  LESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEG---PAAGEYLPGHTSMIRREPIG 120

Query: 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNI 167
           V  QI PWN+PL+M AWKIAPALA GNT+VLKP+E TPLT L +  L AE  +P GVVN+
Sbjct: 121 VVAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNV 179

Query: 168 VPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFAD 226
           V G G  AG ALV HP V  V+ TGS   GK V + + A  LKR  LELGGK+P I+F D
Sbjct: 180 VCGGGASAGDALVAHPRVRMVSLTGSVRTGKKVAR-AAADTLKRVHLELGGKAPVIVFDD 238

Query: 227 ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVE 286
           ADLDAAV G     ++N GQ C A  R +V +++YDEFVA   E      VGDP D + E
Sbjct: 239 ADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTE 298

Query: 287 QGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI 346
            GP     Q +++  F+E      A+++ GG RA   G++ +PTV A V  D +I +EEI
Sbjct: 299 MGPLNSAAQRERVAGFVE-RAPAHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEI 357

Query: 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           FGPV  +  F   +E IE AN+ +YGLA++V+T+D+ +   ++  L  GT
Sbjct: 358 FGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGT 407

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency. Length = 450

>gnl|CDD|143408 cd07089, ALDH_CddD-AldA-like, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

 Score =  379 bits (976), Expect = e-129
 Identities = 151/329 (45%), Positives = 197/329 (59%), Gaps = 9/329 (2%)

Query: 76  LRYYAGFADKIHGK-TIPINGDFFAYT----RHEPVGVCGQIIPWNFPLLMLAWKIAPAL 130
           LRY+A  AD    +  +P+            R EPVGV   I PWNFP  +   K+APAL
Sbjct: 89  LRYFADLADSFPWEFDLPVPALRGGPGRRVVRREPVGVVAAITPWNFPFFLNLAKLAPAL 148

Query: 131 ATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAF 189
           A GNT+VLKPA  TPL+AL +G +IAE  +P GVVN+V G  +A G AL   P VD V+F
Sbjct: 149 AAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEALTTDPRVDMVSF 208

Query: 190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCC 249
           TGST VG+ +     A+ LKR  LELGGKS NI+  DADL AA   A      N GQ C 
Sbjct: 209 TGSTAVGRRIMA-QAAATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCA 267

Query: 250 AGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQ 309
             +R  V  + YDE V       +   VGDP D     GP I   Q D++  +I  G+ +
Sbjct: 268 LTTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDE 327

Query: 310 GAQLVAGGGRA--GDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERAN 367
           GA+LV GGGR    DKGFYV+PT+FA+V +DM+IA+EEIFGPV  +I +   +E +  AN
Sbjct: 328 GARLVTGGGRPAGLDKGFYVEPTLFADVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIAN 387

Query: 368 NSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           +SDYGL+  V++ D+D+   V + +R G+
Sbjct: 388 DSDYGLSGGVWSADVDRAYRVARRIRTGS 416

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD. Length = 459

>gnl|CDD|143457 cd07139, ALDH_AldA-Rv0768, Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

 Score =  379 bits (975), Expect = e-128
 Identities = 154/348 (44%), Positives = 205/348 (58%), Gaps = 8/348 (2%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADK---IHGKTIPINGDFFAYTRHEPVGVCG 110
           T +NG P + S           LRYYA  A        +     G      R EPVGV  
Sbjct: 85  TAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGH--VLVRREPVGVVA 142

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
            I+PWN PL + A KIAPALA G T+VLKP+ +TPL A  +     EAG+P GVVN+VP 
Sbjct: 143 AIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPA 202

Query: 171 YGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
             + G  LV+HPGVDKV+FTGST  G+ +    G   L R TLELGGKS  I+  DADLD
Sbjct: 203 DREVGEYLVRHPGVDKVSFTGSTAAGRRIAAVCG-ERLARVTLELGGKSAAIVLDDADLD 261

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
           AAV G       N GQ C A +R  V  + YDE V           VGDP D   + GP 
Sbjct: 262 AAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPL 321

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGR-AG-DKGFYVQPTVFANVRDDMKIAREEIFG 348
               Q +++  +I  G+++GA+LV GGGR AG D+G++V+PT+FA+V +DM+IA+EEIFG
Sbjct: 322 ASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEIFG 381

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           PV  +I +   ++ +  AN+SDYGL+ +V+T D+++   V + +R GT
Sbjct: 382 PVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGT 429

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD. Length = 471

>gnl|CDD|143456 cd07138, ALDH_CddD_SSP0762, Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

 Score =  378 bits (974), Expect = e-128
 Identities = 150/353 (42%), Positives = 202/353 (57%), Gaps = 21/353 (5%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAG------FADKIHGKTIPINGDFFAYTRHEPVG 107
           TL+ G P  ++ +  V   +  LR  A       F ++     +            EP+G
Sbjct: 83  TLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEERRGNSLV----------VREPIG 132

Query: 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNI 167
           VCG I PWN+PL  +  K+APALA G T+VLKP+E  PL+A+ +  ++ EAG+P GV N+
Sbjct: 133 VCGLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNL 192

Query: 168 VPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFAD 226
           V G G   G AL  HP VD V+FTGST  GK V + + A  +KR  LELGGKS NII  D
Sbjct: 193 VNGDGPVVGEALSAHPDVDMVSFTGSTRAGKRVAE-AAADTVKRVALELGGKSANIILDD 251

Query: 227 ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVE 286
           ADL+ AV       F N GQ C A +R  V  + Y E    +   A+   VGDP D    
Sbjct: 252 ADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATT 311

Query: 287 QGPQIDKEQMDKILEFIESGKSQGAQLVAGG-GR-AG-DKGFYVQPTVFANVRDDMKIAR 343
            GP     Q D++  +I+ G  +GA+LVAGG GR  G ++G++V+PTVFA+V  DM IAR
Sbjct: 312 LGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAR 371

Query: 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           EEIFGPV  +I +   +E I  AN++ YGLA  V++ D ++   V + LRAG 
Sbjct: 372 EEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQ 424

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD. Length = 466

>gnl|CDD|143415 cd07097, ALDH_KGSADH-YcbD, Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

 Score =  378 bits (972), Expect = e-128
 Identities = 157/347 (45%), Positives = 217/347 (62%), Gaps = 6/347 (1%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGVCGQI 112
           T + GK    +   +V  + +  RYYAG A ++ G+T+P         T  EP+GV G I
Sbjct: 84  TREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGVVGLI 142

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
            PWNFP+ + AWKIAPALA GNT+V KPAE TP +A A+  ++ EAG+P GV N+V G G
Sbjct: 143 TPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSG 202

Query: 173 -DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
            + G ALV+HP VD V+FTGST VG+ +   + A+   R  LE+GGK+P ++  DADLD 
Sbjct: 203 SEVGQALVEHPDVDAVSFTGSTAVGRRIAA-AAAARGARVQLEMGGKNPLVVLDDADLDL 261

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           AVE A  G FF+ GQ C A SR  V + I+D FV    ER K   VGD  D  V+ GP +
Sbjct: 262 AVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVV 321

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGR--AGDKGFYVQPTVFANVRDDMKIAREEIFGP 349
            + Q++K L +IE  +S+GA+LV GG R    D+G+Y+ P +FA V +DM+IAREEIFGP
Sbjct: 322 SERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREEIFGP 381

Query: 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           V  +IR    +E +  AN++++GL+A + T  L    +  + + AG 
Sbjct: 382 VAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGV 428

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group. Length = 473

>gnl|CDD|143395 cd06534, ALDH-SF, NAD(P)+-dependent aldehyde dehydrogenase superfamily

 Score =  366 bits (942), Expect = e-125
 Identities = 165/348 (47%), Positives = 205/348 (58%), Gaps = 64/348 (18%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGVC 109
           +LETL+ GKP   +   +V  ++ T RY AG ADK+ G  +P  +    AY R EP+GV 
Sbjct: 38  ALETLETGKPIEEALG-EVARAIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGVV 96

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           G I PWNFPLL+ AWK+APALA GNT+VLKP+E TPLTALA+  L+ EAG+P GVVN+VP
Sbjct: 97  GVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVP 156

Query: 170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G GD  GAAL+ HP VDK++FTGST VGK + + + A NLK  TLELGGKSP I+  DAD
Sbjct: 157 GGGDEVGAALLSHPRVDKISFTGSTAVGKAIMK-AAAENLKPVTLELGGKSPVIVDEDAD 215

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LDAAVEGA FG FFN GQ C A SR                                   
Sbjct: 216 LDAAVEGAVFGAFFNAGQICTAASRLL--------------------------------- 242

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             + +   D+ +E          +LV               TV  +V  DM IA+EEIFG
Sbjct: 243 --VHESIYDEFVE----------KLV---------------TVLVDVDPDMPIAQEEIFG 275

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           PV  +IRF   EE I  AN+++YGL A VFT+DL++   V + LRAGT
Sbjct: 276 PVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGT 323

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer to the cofactor and formation of a thioacylenzyme intermediate. Hydrolysis of the thioacylenzyme and release of the carboxylic acid product occurs, and in most cases, the reduced cofactor dissociates from the enzyme. The evolutionary phylogenetic tree of ALDHs appears to have an initial bifurcation between what has been characterized as the classical aldehyde dehydrogenases, the ALDH family (ALDH) and extended family members or aldehyde dehydrogenase-like (ALDH-L) proteins. The ALDH proteins are represented by enzymes which share a number of highly conserved residues necessary for catalysis and cofactor binding and they include such proteins as retinal dehydrogenase, 10-formyltetrahydrofolate dehydrogenase, non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase, delta(1)-pyrroline-5-carboxylate dehydrogenases, alpha-ketoglutaric semialdehyde dehydrogenase, alpha-aminoadipic semialdehyde dehydrogenase, coniferyl aldehyde dehydrogenase and succinate-semialdehyde dehydrogenase. Included in this larger group are all human, Arabidopsis, Tortula, fungal, protozoan, and Drosophila ALDHs identified in families ALDH1 through ALDH22 with the exception of families ALDH18, ALDH19, and ALDH20 which are present in the ALDH-like group. The ALDH-like group is represented by such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 367

>gnl|CDD|143424 cd07106, ALDH_AldA-AAD23400, Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

 Score =  367 bits (944), Expect = e-124
 Identities = 145/343 (42%), Positives = 200/343 (58%), Gaps = 5/343 (1%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQII 113
           TL+ GKP   +   +V  ++  LRY A        + I  +       R +P+GV   I+
Sbjct: 66  TLEQGKPLAEAQ-FEVGGAVAWLRYTASLDLPD--EVIEDDDTRRVELRRKPLGVVAAIV 122

Query: 114 PWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGD 173
           PWNFPLL+ AWKIAPAL  GNT+VLKP+  TPL  L +G L  E  +P GV+N+V G  +
Sbjct: 123 PWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSGGDE 181

Query: 174 AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAV 233
            G AL  HP + K++FTGST  GK V   S A  LKR TLELGG    I+  D D+DA  
Sbjct: 182 LGPALTSHPDIRKISFTGSTATGKKVMA-SAAKTLKRVTLELGGNDAAIVLPDVDIDAVA 240

Query: 234 EGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDK 293
               +G F N GQ C A  R +V ++IYDEF       AK   VGD  D     GP  +K
Sbjct: 241 PKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNK 300

Query: 294 EQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQL 353
            Q DK+ E +E  K++GA+++AGG      G+++ PT+  +  +  +I  EE FGPV  +
Sbjct: 301 MQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGPVLPV 360

Query: 354 IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           +++S  +EVI RAN+S+YGL A+V++ DL++   V + L AGT
Sbjct: 361 LKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGT 403

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD. Length = 446

>gnl|CDD|215260 PLN02467, PLN02467, betaine aldehyde dehydrogenase

 Score =  362 bits (930), Expect = e-121
 Identities = 157/353 (44%), Positives = 218/353 (61%), Gaps = 9/353 (2%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPIN---GDFFAYTRHEP 105
           + LETLD GKP + + + D++       YYA  A+ +  K   P++     F  Y   EP
Sbjct: 93  AKLETLDCGKPLDEA-AWDMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEP 151

Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           +GV G I PWN+PLLM  WK+APALA G T VLKP+E   +T L +  +  E G+P GV+
Sbjct: 152 LGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVL 211

Query: 166 NIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           N+V G G +AGA L  HPGVDK+AFTGST  G+ +   + A  +K  +LELGGKSP I+F
Sbjct: 212 NVVTGLGTEAGAPLASHPGVDKIAFTGSTATGRKIMT-AAAQMVKPVSLELGGKSPIIVF 270

Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
            D DLD AVE A FG F+  GQ C A SR  V + I  EF+ +  + AK   + DP +  
Sbjct: 271 DDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEG 330

Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD--KGFYVQPTVFANVRDDMKIA 342
              GP + + Q +K+L+FI + KS+GA ++ GG R     KGF+++PT+  +V   M+I 
Sbjct: 331 CRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIW 390

Query: 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           REE+FGPV  +  FS+ +E IE AN+S YGLA AV + DL++   V++  +AG
Sbjct: 391 REEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAG 443

Length = 503

>gnl|CDD|143425 cd07107, ALDH_PhdK-like, Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

 Score =  360 bits (925), Expect = e-121
 Identities = 155/350 (44%), Positives = 219/350 (62%), Gaps = 9/350 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           ++ LD G P +     DV  +   L Y+AG   ++ G+TIP+ G    YT  EP GV  +
Sbjct: 64  IDALDCGNPVSAMLG-DVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVVAR 122

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I+ +N PL+  A KIA  LA GNT+V+KP EQ PL+AL +  L  E  +P GV NI+PG 
Sbjct: 123 IVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGD 181

Query: 172 GD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G  AGAALV+HP V ++A  GS   G+ + + + A  +K  TLELGGK+  I+F DAD +
Sbjct: 182 GATAGAALVRHPDVKRIALIGSVPTGRAIMR-AAAEGIKHVTLELGGKNALIVFPDADPE 240

Query: 231 AAVEGAHFGLFFN-MGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           AA + A  G+ F   GQ C + SR FV ++IYDE +AR  ER     VGDP D     GP
Sbjct: 241 AAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGP 300

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGR----AGDKGFYVQPTVFANVRDDMKIAREE 345
            + ++Q D+++ +I+S K +GA+LV GGGR    A + GFYV+PTVFA+V   M+IAREE
Sbjct: 301 LVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAREE 360

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           IFGPV  ++R+    E++ +AN  +YGL AA++T D+ + +   + + AG
Sbjct: 361 IFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAG 410

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD. Length = 456

>gnl|CDD|143422 cd07104, ALDH_BenzADH-like, ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

 Score =  355 bits (913), Expect = e-119
 Identities = 150/335 (44%), Positives = 210/335 (62%), Gaps = 17/335 (5%)

Query: 69  VEYSLRTLRYYAGFADKIHGKTIP--INGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWK- 125
           V  ++  LR  AG   +  G+ +P  + G   +  R  P+GV G I P+NFPL+ LA + 
Sbjct: 61  VGAAIAILREAAGLPRRPEGEILPSDVPGKE-SMVRRVPLGVVGVISPFNFPLI-LAMRS 118

Query: 126 IAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGYGD-AGAALVQ 180
           +APALA GN +VLKP  +TP+T    G LIA    EAG+P+GV+N+VPG G   G ALV+
Sbjct: 119 VAPALALGNAVVLKPDSRTPVTG---GLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVE 175

Query: 181 HPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGL 240
           HP V  ++FTGST VG+ + + +G  +LK+  LELGG +P I+  DADLD AV  A FG 
Sbjct: 176 HPRVRMISFTGSTAVGRHIGELAGR-HLKKVALELGGNNPLIVLDDADLDLAVSAAAFGA 234

Query: 241 FFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKIL 300
           F + GQ C A  R  V +++YDEFV +   +AK   VGDP D +   GP I++ Q+D++ 
Sbjct: 235 FLHQGQICMAAGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVH 294

Query: 301 EFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIE 360
             +E   + GA+L+ GG     +G + QPTV ++V  DM I REEIFGPV  +I F   E
Sbjct: 295 AIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEIFGPVAPVIPFDDDE 351

Query: 361 EVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           E +E AN+++YGL+AAVFT+DL++     + L  G
Sbjct: 352 EAVELANDTEYGLSAAVFTRDLERAMAFAERLETG 386

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences. Length = 431

>gnl|CDD|143407 cd07088, ALDH_LactADH-AldA, Escherichia coli lactaldehyde dehydrogenase AldA-like

 Score =  355 bits (914), Expect = e-119
 Identities = 150/345 (43%), Positives = 218/345 (63%), Gaps = 5/345 (1%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCGQI 112
             + GK  +++  V+VE++   + Y A +A +I G+ IP    +   +    P+GV   I
Sbjct: 82  VEEQGKTLSLAR-VEVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGVVAGI 140

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
           +PWNFP  ++A K+APAL TGNTIV+KP+E+TPL AL    L+ EAG+P GV+NIV G G
Sbjct: 141 LPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRG 200

Query: 173 -DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
              G ALV HP V  ++ TGSTE G+ + + + A N+ + +LELGGK+P I+  DADLD 
Sbjct: 201 SVVGDALVAHPKVGMISLTGSTEAGQKIMEAA-AENITKVSLELGGKAPAIVMKDADLDL 259

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           AV+        N GQ C    R +V + IYDEF+ +  E+ K   VGDPFD   + GP +
Sbjct: 260 AVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLV 319

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRA-GDKGFYVQPTVFANVRDDMKIAREEIFGPV 350
           ++  +DK+ E +E     GA L+ GG R  G+KG++ +PTV  NVR DM+I +EEIFGPV
Sbjct: 320 NEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEIFGPV 379

Query: 351 QQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
             +++FSS++E IE AN+S+YGL + ++T++L+     T  L  G
Sbjct: 380 LPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFG 424

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD. Length = 468

>gnl|CDD|143449 cd07131, ALDH_AldH-CAJ73105, Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

 Score =  353 bits (907), Expect = e-118
 Identities = 168/352 (47%), Positives = 231/352 (65%), Gaps = 8/352 (2%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108
           + L T + GKP       DV+ ++   +Y AG   ++ G+T+P    +  A TR +P+GV
Sbjct: 80  ARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGV 138

Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
              I PWNFP+ + +WKI PAL  GNT+V KPAE TP  AL +  L AEAG+P GVVN+V
Sbjct: 139 VALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVV 198

Query: 169 PGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA 227
            G G+  G ALV+HP VD V+FTGSTEVG+ + +     N KR  LE+GGK+P I+  DA
Sbjct: 199 HGRGEEVGEALVEHPDVDVVSFTGSTEVGERIGETCARPN-KRVALEMGGKNPIIVMDDA 257

Query: 228 DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQ 287
           DLD A+EGA +  F   GQ C A SR  V +++YDEF+ R  ERAKR  VGD  D   + 
Sbjct: 258 DLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDM 317

Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA----GDKGFYVQPTVFANVRDDMKIAR 343
           GP I++ Q++K+L + E GK +GA L+ GG R      +KG++V+PTVF +V  DM+IA+
Sbjct: 318 GPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQ 377

Query: 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           EEIFGPV  LI  SS+EE IE AN+++YGL++A++T+D++K     + L AG
Sbjct: 378 EEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAG 429

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD. Length = 478

>gnl|CDD|143426 cd07108, ALDH_MGR_2402, Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

 Score =  351 bits (903), Expect = e-118
 Identities = 157/351 (44%), Positives = 213/351 (60%), Gaps = 9/351 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           L  L+ G         +        RY+ G A ++ G+T+P   D   YT  EP+GV G 
Sbjct: 64  LLALETGNALRTQARPEAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGVVGA 123

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I+PWN PL++ A KIAPAL  GNT+VLK AE  PL  L +  ++A+  +P GV+N++ GY
Sbjct: 124 ILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGY 182

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G + GAALV HP VDKV FTGSTEVGK++ + + A  L   +LELGGKSP I+F DADLD
Sbjct: 183 GEECGAALVDHPDVDKVTFTGSTEVGKIIYR-AAADRLIPVSLELGGKSPMIVFPDADLD 241

Query: 231 AAVEGAHFGL-FFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
            AV+GA  G+ F   GQ C AGSR FV + IYD F+ +   +  +  +GDP D   + G 
Sbjct: 242 DAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGA 301

Query: 290 QIDKEQMDKILEFIESGKS-QGAQLVAGG----GRAGDKGFYVQPTVFANVRDDMKIARE 344
            I ++Q  K+  +I+ G S  GA ++ GG          GF+VQPT+F+ V ++ ++ARE
Sbjct: 302 IISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRLARE 361

Query: 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           EIFGPV   I +   +EVI  AN+S YGLAA V+T+DL +       L AG
Sbjct: 362 EIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAG 412

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD. Length = 457

>gnl|CDD|182108 PRK09847, PRK09847, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

 Score =  350 bits (899), Expect = e-116
 Identities = 151/348 (43%), Positives = 222/348 (63%), Gaps = 4/348 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           LETLD GKP   S   D+  + R +R+YA   DK++G+    +    A    EPVGV   
Sbjct: 104 LETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVIAA 163

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I+PWNFPLL+  WK+ PALA GN+++LKP+E++PL+A+ +  L  EAG+P+GV+N+V G+
Sbjct: 164 IVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGF 223

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA-DL 229
           G +AG AL +H  +D +AFTGST  GK + + +G SN+KR  LE GGKS NI+FAD  DL
Sbjct: 224 GHEAGQALSRHNDIDAIAFTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDL 283

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
             A      G+F+N GQ C AG+R  ++++I DEF+A   ++A+    G P D     G 
Sbjct: 284 QQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGT 343

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP 349
            ID    D +  FI  G+S+G  L+   GR       + PT+F +V  +  ++REEIFGP
Sbjct: 344 LIDCAHADSVHSFIREGESKGQLLL--DGRNAGLAAAIGPTIFVDVDPNASLSREEIFGP 401

Query: 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           V  + RF+S E+ ++ AN+S YGL AAV+T+DL + + +++ L+AG++
Sbjct: 402 VLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSV 449

Length = 494

>gnl|CDD|143467 cd07149, ALDH_y4uC, Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  344 bits (884), Expect = e-115
 Identities = 146/347 (42%), Positives = 207/347 (59%), Gaps = 13/347 (3%)

Query: 58  GKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPING-----DFFAYTRHEPVGVCGQI 112
           GKP   +   +V+ ++ TLR  A  A ++ G+TIP +          +T  EP+GV   I
Sbjct: 72  GKPIKDAR-KEVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIREPIGVVAAI 130

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
            P+NFPL ++A K+ PA+A GN +VLKPA QTPL+AL +  L+ EAG+P+G +N+V G G
Sbjct: 131 TPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSG 190

Query: 173 DA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
           +  G ALV  P V  ++FTGS  VG+ + + +G   LK+ TLELG  +  I+ ADADL+ 
Sbjct: 191 ETVGDALVTDPRVRMISFTGSPAVGEAIARKAG---LKKVTLELGSNAAVIVDADADLEK 247

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           AVE    G F N GQ C +  R FV + IYDEF+ R     K+  VGDP D + + GP I
Sbjct: 248 AVERCVSGAFANAGQVCISVQRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMI 307

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQ 351
            + + ++I E++E     GA+L+ GG R G     ++PTV  +V  DMK+  EE+F PV 
Sbjct: 308 SEAEAERIEEWVEEAVEGGARLLTGGKRDGA---ILEPTVLTDVPPDMKVVCEEVFAPVV 364

Query: 352 QLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLI 398
            L  F +++E I  AN+S YGL A VFT DL K     + L  G ++
Sbjct: 365 SLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVM 411

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 453

>gnl|CDD|143463 cd07145, ALDH_LactADH_F420-Bios, Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

 Score =  338 bits (870), Expect = e-113
 Identities = 141/351 (40%), Positives = 212/351 (60%), Gaps = 10/351 (2%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-----NGDFFAYTRHEPVGV 108
           T++ GKP   S  V+VE ++R  +  A  A  + G+TIP+     N    A+T  EP+GV
Sbjct: 68  TIEVGKPIKQS-RVEVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVREPIGV 126

Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
            G I P+NFP  + A KIAPA+A GN++V+KP+  TPLTA+ +  ++ EAG+P GV+N+V
Sbjct: 127 VGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVV 186

Query: 169 PGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA 227
            GYG   G  +V +P V+ ++FTGST VG L+   +G    K+  LELGG  P I+  DA
Sbjct: 187 TGYGSEVGDEIVTNPKVNMISFTGSTAVGLLIASKAG-GTGKKVALELGGSDPMIVLKDA 245

Query: 228 DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQ 287
           DL+ AV  A  G F N GQ C A  R  V++ +YD+F+    E+ K+  VGDP D + + 
Sbjct: 246 DLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDL 305

Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           GP I  E ++++   +     +G +++ GG    D+G +  PTV  N   DM + +EE+F
Sbjct: 306 GPLISPEAVERMENLVNDAVEKGGKILYGG--KRDEGSFFPPTVLENDTPDMIVMKEEVF 363

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLI 398
           GPV  + +    EE +E AN+++YGL A+VFT D+++   V + L AG ++
Sbjct: 364 GPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVV 414

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD. Length = 456

>gnl|CDD|215157 PLN02278, PLN02278, succinic semialdehyde dehydrogenase

 Score =  334 bits (858), Expect = e-110
 Identities = 155/349 (44%), Positives = 212/349 (60%), Gaps = 10/349 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTR----HEPVG 107
           L TL+ GKP   +   +V Y    L Y+A  A +++G  IP     F   R     +PVG
Sbjct: 107 LMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDIIPSP---FPDRRLLVLKQPVG 162

Query: 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNI 167
           V G I PWNFPL M+  K+ PALA G T+V+KP+E TPLTALA   L  +AGIP GV+N+
Sbjct: 163 VVGAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNV 222

Query: 168 VPGYGDA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFAD 226
           V G     G AL+  P V K+ FTGST VGK +  G+ A+ +KR +LELGG +P I+F D
Sbjct: 223 VMGDAPEIGDALLASPKVRKITFTGSTAVGKKLMAGAAAT-VKRVSLELGGNAPFIVFDD 281

Query: 227 ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVE 286
           ADLD AV+GA    F N GQ C   +R  VQ+ IYD+F     +  ++  VGD F+  V 
Sbjct: 282 ADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVT 341

Query: 287 QGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI 346
           QGP I++  + K+   ++   S+GA+++ GG R    G + +PTV  +V +DM I REE+
Sbjct: 342 QGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEV 401

Query: 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           FGPV  L RF + EE I  AN+++ GLAA +FT+DL +   V++ L  G
Sbjct: 402 FGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYG 450

Length = 498

>gnl|CDD|131352 TIGR02299, HpaE, 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

 Score =  334 bits (857), Expect = e-110
 Identities = 155/355 (43%), Positives = 217/355 (61%), Gaps = 12/355 (3%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFA-DKIHGKTIPINGDFFAYTRHEPVGVCG 110
           LE LD G+P   +    V  +    R++A    + + G+T P++     YT   PVG  G
Sbjct: 83  LECLDCGQPLRQTRQQ-VIRAAENFRFFADKCEEAMDGRTYPVD-THLNYTVRVPVGPVG 140

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
            I PWN P ++  WKIAPALA GNT+VLKPAE +PLTA  +  +  EAG+P+GV N+V G
Sbjct: 141 LITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHG 200

Query: 171 YG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           +G +AG ALV HP V  V+FTG T  G ++ + +GA  LKR ++ELGGKSP I+F DADL
Sbjct: 201 FGEEAGKALVAHPDVKAVSFTGETATGSIIMR-NGADTLKRFSMELGGKSPVIVFDDADL 259

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           + A++   F +F   G+ C A SR  VQ++I ++FV +  ER +   VG P D   E GP
Sbjct: 260 ERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGP 319

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD-------KGFYVQPTVFANVRDDMKIA 342
            I  E + K+L ++E+ + +GA ++ GG RA         +G YV PTVF    + M+IA
Sbjct: 320 LIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMRIA 379

Query: 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           +EEIFGPV  +I F   EE IE+AN++ YGLA  V+T D+ + + V   L AG +
Sbjct: 380 QEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMI 434

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring. Length = 488

>gnl|CDD|143434 cd07116, ALDH_ACDHII-AcoD, Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

 Score =  332 bits (852), Expect = e-110
 Identities = 158/356 (44%), Positives = 213/356 (59%), Gaps = 19/356 (5%)

Query: 53  ETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQI 112
           ET DNGKP   + + D+  ++   RY+AG      G    I+ +  AY  HEP+GV GQI
Sbjct: 84  ETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVVGQI 143

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
           IPWNFPLLM  WK+APALA GN +VLKPAEQTP + L +  LI +  +P GVVN+V G+G
Sbjct: 144 IPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFG 202

Query: 173 -DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA------ 225
            +AG  L     + KVAFTG T  G+L+ Q   + N+   TLELGGKSPNI FA      
Sbjct: 203 LEAGKPLASSKRIAKVAFTGETTTGRLIMQ-YASENIIPVTLELGGKSPNIFFADVMDAD 261

Query: 226 DADLDAAVEGAHFGLF-FNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
           DA  D A+EG  F +F  N G+ C   SR  +Q++IYD F+ R+ ER K    G+P D  
Sbjct: 262 DAFFDKALEG--FVMFALNQGEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTE 319

Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA-----GDKGFYVQPTVFANVRDDM 339
              G Q   EQ++KIL +I+ GK +GA+++ GG R         G+YV  T      + M
Sbjct: 320 TMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGG--NKM 377

Query: 340 KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           +I +EEIFGPV  +  F   EE +E AN++ YGL A V+T+D +    + +G++AG
Sbjct: 378 RIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAG 433

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression. Length = 479

>gnl|CDD|143468 cd07150, ALDH_VaniDH_like, Pseudomonas putida vanillin dehydrogenase-like

 Score =  330 bits (849), Expect = e-109
 Identities = 139/329 (42%), Positives = 203/329 (61%), Gaps = 6/329 (1%)

Query: 69  VEYSLRTLRYYAGFADKIHGKTIPING-DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIA 127
             ++   LR  AG   ++ G+T+P +     + +   P+GV   I P+N+PL++   K+A
Sbjct: 82  TTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGVVAGITPFNYPLILATKKVA 141

Query: 128 PALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDK 186
            ALA GNT+VLKP+E+TP+  L +  ++ EAG+P+GV N+V G G   G  LV  P V  
Sbjct: 142 FALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRM 201

Query: 187 VAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQ 246
           V FTGST VG+ + + +G  +LK+ TLELGGK+P I+ ADADLD AV  A FG F + GQ
Sbjct: 202 VTFTGSTAVGREIAEKAGR-HLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQ 260

Query: 247 CCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESG 306
            C + SR  V++ +YDEFV +   RA +  VGDP D +   GP I   Q+++I   +E  
Sbjct: 261 ICMSASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDA 320

Query: 307 KSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERA 366
            ++GA+L+ GG   G+   + QPTV  +V  DM+I REE FGPV  +I     EE +E A
Sbjct: 321 VAKGAKLLTGGKYDGN---FYQPTVLTDVTPDMRIFREETFGPVTSVIPAKDAEEALELA 377

Query: 367 NNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           N+++YGL+AA+ T DL +   + + L +G
Sbjct: 378 NDTEYGLSAAILTNDLQRAFKLAERLESG 406

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde. Length = 451

>gnl|CDD|143431 cd07113, ALDH_PADH_NahF, Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

 Score =  329 bits (844), Expect = e-108
 Identities = 149/352 (42%), Positives = 214/352 (60%), Gaps = 7/352 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT----IP-INGD-FFAYTRHEP 105
           LETL +GK  ++S + +V  S   LRY+AG+A KI+G+T    IP + G+ + A+TR EP
Sbjct: 83  LETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTRREP 142

Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           VGV   I+PWNF +++  WKI  ALATG TIV+KP+E TPLT L V  L  EAGIP+GV+
Sbjct: 143 VGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVL 202

Query: 166 NIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
           N+V G G  GA L+ HP V KV+FTGS   GK + +   AS+L R TLELGGK+      
Sbjct: 203 NVVNGKGAVGAQLISHPDVAKVSFTGSVATGKKIGR-QAASDLTRVTLELGGKNAAAFLK 261

Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
           DAD+D  VEG     F + GQ C A  R +V  + +DE V +  +      VG P D +V
Sbjct: 262 DADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFDELVTKLKQALSSFQVGSPMDESV 321

Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 345
             GP  ++   DK+  +++  +++G ++V GG     +G++VQPT+      D ++ REE
Sbjct: 322 MFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLMREE 381

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            FGPV   + +   EE+I+  N++ +GL A+V+T +L K       + AGT+
Sbjct: 382 TFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTV 433

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate. Length = 477

>gnl|CDD|143405 cd07086, ALDH_F7_AASADH-like, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

 Score =  327 bits (841), Expect = e-108
 Identities = 131/312 (41%), Positives = 180/312 (57%), Gaps = 8/312 (2%)

Query: 78  YYAGFADKIHGKTIPIN-GDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTI 136
           Y  G +  ++G TIP          +  P+GV G I  +NFP+ +  W  A AL  GNT+
Sbjct: 105 YAVGLSRMLYGLTIPSERPGHRLMEQWNPLGVVGVITAFNFPVAVPGWNAAIALVCGNTV 164

Query: 137 VLKPAEQTPLTALAVGALIAEA----GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGS 192
           V KP+E TPLTA+AV  ++AE     G+P GVVN+V G GD G  LV  P V  V+FTGS
Sbjct: 165 VWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRVPLVSFTGS 224

Query: 193 TEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGS 252
           TEVG+ V + + A    R  LELGG +  I+  DADLD AV    F      GQ C    
Sbjct: 225 TEVGRRVGE-TVARRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTR 283

Query: 253 RTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQ 312
           R  V +++YDEF+ R  +  K+  +GDP D     GP I++  ++K L  IE  KSQG  
Sbjct: 284 RLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGT 343

Query: 313 LVAGGGRA--GDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSD 370
           ++ GG R   G+ G YV+PT+   V DD +I +EE F P+  +I+F S+EE I   N+  
Sbjct: 344 VLTGGKRIDGGEPGNYVEPTIVTGVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVP 403

Query: 371 YGLAAAVFTKDL 382
            GL++++FT+DL
Sbjct: 404 QGLSSSIFTEDL 415

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105). Length = 478

>gnl|CDD|188167 TIGR01780, SSADH, succinate-semialdehyde dehydrogenase

 Score =  322 bits (826), Expect = e-106
 Identities = 149/345 (43%), Positives = 213/345 (61%), Gaps = 5/345 (1%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGVCGQI 112
           TL+NGKP   +   ++ Y+   L ++A  A +++G TIP    D       +PVGVC  I
Sbjct: 66  TLENGKPLKEAKG-EILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLIVIKQPVGVCAAI 124

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY- 171
            PWNFP  M+  K   ALA G T+V+KPAEQTPL+ALA+  L  +AGIP+GV+N++ G  
Sbjct: 125 TPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSR 184

Query: 172 -GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
             + G  L   P V K++FTGST VGK++ + S AS +K+ ++ELGG +P I+F DADLD
Sbjct: 185 AKEVGNVLTTSPLVRKISFTGSTNVGKILMKQS-ASTVKKVSMELGGNAPFIVFDDADLD 243

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
            AVEGA    F N GQ C   +R +V D IYDEF  +  E  K+  VG+  D  V QGP 
Sbjct: 244 QAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPL 303

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPV 350
           I+++ ++K+ + I     +GA++V GG R    G + +PTV +NV  DM +++EE FGP+
Sbjct: 304 INEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTADMLVSKEETFGPL 363

Query: 351 QQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
             + +F   EEVI  AN+++ GLAA  F++DL +   V + L  G
Sbjct: 364 APVFKFDDEEEVIAIANDTEVGLAAYFFSRDLSRIWRVAEALEYG 408

Succinic semialdehyde dehydrogenase is one of three enzymes constituting 4-aminobutyrate (GABA) degradation in both prokaryotes and eukaryotes, catalyzing the (NAD(P)+)-dependent catabolism reaction of succinic semialdehyde to succinate for metabolism by the citric acid cycle. The EC number depends on the cofactor: 1.2.1.24 for NAD only, 1.2.1.79 for NADP only, and 1.2.1.16 if both can be used. In Escherichia coli, succinic semialdehyde dehydrogenase is located in an unidirectionally transcribed gene cluster encoding enzymes for GABA degradation and is suggested to be cotranscribed with succinic semialdehyde transaminase from a common promoter upstream of SSADH. Similar gene arrangements can be found in characterized Ralstonia eutropha and the genome analysis of Bacillus subtilis. Prokaryotic succinic semialdehyde dehydrogenases (1.2.1.16) share high sequence homology to characterized succinic semialdehyde dehydrogenases from rat and human (1.2.1.24), exhibiting conservation of proposed cofactor binding residues, and putative active sites (G-237 & G-242, C-293 & G-259 respectively of rat SSADH). Eukaryotic SSADH enzymes exclusively utilize NAD+ as a cofactor, exhibiting little to no NADP+ activity. While a NADP+ preference has been detected in prokaryotes in addition to both NADP+- and NAD+-dependencies as in E.coli, Pseudomonas, and Klebsiella pneumoniae. The function of this alternative SSADH currently is unknown, but has been suggested to play a possible role in 4-hydroxyphenylacetic degradation. Just outside the scope of this model, are several sequences belonging to clades scoring between trusted and noise. These sequences may be actual SSADH enzymes, but lack sufficiently close characterized homologs to make a definitive assignment at this time. SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070) [Central intermediary metabolism, Other]. Length = 448

>gnl|CDD|143442 cd07124, ALDH_PutA-P5CDH-RocA, Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

 Score =  322 bits (827), Expect = e-105
 Identities = 146/356 (41%), Positives = 203/356 (57%), Gaps = 10/356 (2%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++   L+ GK +  +   DV  ++  L YYA    ++ G  + +         + P+GV 
Sbjct: 112 AAWMVLEVGKNWAEAD-ADVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVG 170

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             I PWNFPL +LA     AL TGNT+VLKPAE TP+ A  +  ++ EAG+P GVVN +P
Sbjct: 171 AVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLP 230

Query: 170 GYGDA-GAALVQHPGVDKVAFTGSTEVG-----KLVQQGSGASNLKRTTLELGGKSPNII 223
           G G+  G  LV+HP V  +AFTGS EVG     +  +   G   LKR   E+GGK+  I+
Sbjct: 231 GPGEEVGDYLVEHPDVRFIAFTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIV 290

Query: 224 FADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDL 283
             DADLD A EG     F   GQ C A SR  V +++YDEF+ R  ER K   VGDP D 
Sbjct: 291 DEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDEFLERLVERTKALKVGDPEDP 350

Query: 284 NVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD--KGFYVQPTVFANVRDDMKI 341
            V  GP IDK   D+I  +IE GKS+G +L+ GG       +G++VQPT+FA+V  D ++
Sbjct: 351 EVYMGPVIDKGARDRIRRYIEIGKSEG-RLLLGGEVLELAAEGYFVQPTIFADVPPDHRL 409

Query: 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           A+EEIFGPV  +I+    +E +E AN+++YGL   VF++  +      +    G L
Sbjct: 410 AQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNL 465

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. Length = 512

>gnl|CDD|143417 cd07099, ALDH_DDALDH, Methylomonas sp

 Score =  314 bits (807), Expect = e-103
 Identities = 132/347 (38%), Positives = 191/347 (55%), Gaps = 7/347 (2%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG----KTIPINGDFFAYTRHEPVGVC 109
             + GKP   +  ++V  +L  + + A  A ++       T  +  +  A   + P GV 
Sbjct: 65  HAETGKPRADAG-LEVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRPYGVV 123

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           G I PWN+PLL     I PALA GN +VLKP+E TPL    +    A AG P+GV+ +V 
Sbjct: 124 GVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVT 183

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G G  GAAL+   GVDKVAFTGS   G+ V   + A  L    LELGGK P I+ ADADL
Sbjct: 184 GDGATGAALIDA-GVDKVAFTGSVATGRKVMAAA-AERLIPVVLELGGKDPMIVLADADL 241

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           + A   A +G   N GQ C +  R +V +++YDEFVAR   +A+    G     + + GP
Sbjct: 242 ERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGP 301

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP 349
                Q+D +   ++   ++GA+ + GG R+   G + +PTV  +V  DM + REE FGP
Sbjct: 302 MTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREETFGP 361

Query: 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           V  ++  +  +E I  AN+S YGL+A+VF++DL +   + + L AG 
Sbjct: 362 VLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGA 408

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid. Length = 453

>gnl|CDD|132260 TIGR03216, OH_muco_semi_DH, 2-hydroxymuconic semialdehyde dehydrogenase

 Score =  308 bits (792), Expect = e-101
 Identities = 141/364 (38%), Positives = 201/364 (55%), Gaps = 16/364 (4%)

Query: 43  NEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK----TIPINGDFF 98
           ++F+ A    E  D GKP +++  +D+       R +A        +      P      
Sbjct: 77  DDFLAA----EVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGAL 132

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
            Y   +P+GV G I PWN PLL++ WK+ PALA GNT+V+KP+E+TP TA  +G ++   
Sbjct: 133 NYAVRKPLGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAV 192

Query: 159 GIPEGVVNIVPGYG--DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELG 216
           G+P+GV N+V G+G   AG  L +HPGVD + FTG T  G  + + + A  +K  + ELG
Sbjct: 193 GVPKGVYNVVHGFGPDSAGEFLTRHPGVDAITFTGETRTGSAIMKAA-ADGVKPVSFELG 251

Query: 217 GKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRT 276
           GK+  I+FAD D DAAV G     F N GQ C    R +V+  I+D FVA    RA+   
Sbjct: 252 GKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDRFVAALKARAESLK 311

Query: 277 VGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGG-----RAGDKGFYVQPTV 331
           +G P D     GP I  E  DK+L +      +GA +V GGG      A   G +VQPT+
Sbjct: 312 IGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTI 371

Query: 332 FANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQG 391
           +  + D  ++  EEIFGP   +  F S EEVI  AN++ YGLAA+V+T+DL + + V + 
Sbjct: 372 WTGLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQ 431

Query: 392 LRAG 395
           +  G
Sbjct: 432 MEVG 435

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation [Energy metabolism, Other]. Length = 481

>gnl|CDD|143438 cd07120, ALDH_PsfA-ACA09737, Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

 Score =  305 bits (782), Expect = 1e-99
 Identities = 142/350 (40%), Positives = 197/350 (56%), Gaps = 7/350 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           L  L+NGK    +   ++  ++  LRYYAG A    G+ I      F+    EP+GV G 
Sbjct: 65  LLALENGKILGEA-RFEISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVAGI 123

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA-GIPEGVVNIVPG 170
           I+PWN P+++L   +APALA G T+V+KPA QT     A+  ++AE   +P GVVN+   
Sbjct: 124 IVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTE 183

Query: 171 YG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
            G +  A LV  P VD ++FTGST  G+ +   + A  LKR  LELGGK+P I+F DADL
Sbjct: 184 SGSEGAAHLVASPDVDVISFTGSTATGRAIMA-AAAPTLKRLGLELGGKTPCIVFDDADL 242

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           DAA+      L    GQ C AGSR  VQ +I DE   R   R     VG   D   + GP
Sbjct: 243 DAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGP 302

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD---KGFYVQPTVFANVRDDMKIAREEI 346
            ID+  +D++   +E   + GA++V  GG   +   KG +++PT+      D  I +EEI
Sbjct: 303 LIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQEEI 362

Query: 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           FGPV  L  F    E +  AN++DYGLAA+V+T+DL +   V + +RAGT
Sbjct: 363 FGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGT 412

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural. Length = 455

>gnl|CDD|143469 cd07151, ALDH_HBenzADH, NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

 Score =  303 bits (779), Expect = 5e-99
 Identities = 144/337 (42%), Positives = 209/337 (62%), Gaps = 15/337 (4%)

Query: 66  SVDVEYSLRTLRYYAGFADKIHGKTIP--INGDFFAYTRHEPVGVCGQIIPWNFPLLMLA 123
           +++   ++   R  A F  ++ G+ +P  + G      R EP+GV G I PWNFPL +  
Sbjct: 90  NIEWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYR-EPLGVVGVISPWNFPLHLSM 148

Query: 124 WKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGYG-DAGAAL 178
             +APALA GN +VLKPA  TP+T    G L+A    EAG+P+GV+N+V G G + G A 
Sbjct: 149 RSVAPALALGNAVVLKPASDTPITG---GLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAF 205

Query: 179 VQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHF 238
           V+HP    ++FTGST VG+ + + +G  +LK+  LELGG +P ++  DAD+DAAV  A F
Sbjct: 206 VEHPVPRLISFTGSTPVGRHIGELAGR-HLKKVALELGGNNPFVVLEDADIDAAVNAAVF 264

Query: 239 GLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDK 298
           G F + GQ C A +R  V + +YDEFV +  ER K    GDP D +   GP I++ Q+D 
Sbjct: 265 GKFLHQGQICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDG 324

Query: 299 ILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSS 358
           +L+ IE    +GA L+ GG   G+    ++PTV ++V +DM+IAREEIFGPV  +I+   
Sbjct: 325 LLDKIEQAVEEGATLLVGGEAEGN---VLEPTVLSDVTNDMEIAREEIFGPVAPIIKADD 381

Query: 359 IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
            EE +E AN+++YGL+ AVFT DL++     + + AG
Sbjct: 382 EEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAG 418

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD. Length = 465

>gnl|CDD|143418 cd07100, ALDH_SSADH1_GabD1, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

 Score =  302 bits (775), Expect = 7e-99
 Identities = 136/343 (39%), Positives = 183/343 (53%), Gaps = 4/343 (1%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADK-IHGKTIPINGDFFAYTRHEPVGVCGQI 112
           TL+ GKP   + + +VE      RYYA  A+  +  + I  +    AY R+EP+GV   I
Sbjct: 46  TLEMGKPIAEARA-EVEKCAWICRYYAENAEAFLADEPIETDAGK-AYVRYEPLGVVLGI 103

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
           +PWNFP   +    AP L  GNT++LK A   P  ALA+  L  EAG PEGV   +    
Sbjct: 104 MPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDS 163

Query: 173 DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAA 232
           D   A++  P V  V  TGS   G+ V   +G  NLK++ LELGG  P I+  DADLD A
Sbjct: 164 DQVEAIIADPRVRGVTLTGSERAGRAVAAEAGK-NLKKSVLELGGSDPFIVLDDADLDKA 222

Query: 233 VEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQID 292
           V+ A  G   N GQ C A  R  V + +YDEF+ +  E      VGDP D + + GP   
Sbjct: 223 VKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLAR 282

Query: 293 KEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQ 352
           K+  D++ E +E   + GA L+ GG R    G +  PTV  +V   M    EE+FGPV  
Sbjct: 283 KDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFGPVAA 342

Query: 353 LIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           +I+    EE I  AN+S +GL  +VFT DL++   V + L AG
Sbjct: 343 VIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAG 385

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate. Length = 429

>gnl|CDD|143470 cd07152, ALDH_BenzADH, NAD-dependent benzaldehyde dehydrogenase II-like

 Score =  302 bits (776), Expect = 7e-99
 Identities = 128/332 (38%), Positives = 193/332 (58%), Gaps = 5/332 (1%)

Query: 67  VDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKI 126
            +V  ++  L   AG   +  G+ +P      +  R  P+GV G I P+NFPL++    +
Sbjct: 72  FEVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVVGVISPFNFPLILAMRSV 131

Query: 127 APALATGNTIVLKPAEQTPLTALAVGALI-AEAGIPEGVVNIVPGYGDAGAALVQHPGVD 185
           APALA GN +VLKP  +TP++   V A +  EAG+P GV++++PG  DAG ALV+ P V 
Sbjct: 132 APALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVA 191

Query: 186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMG 245
            ++FTGST VG+ V + +G  +LK+ +LELGGK+  I+  DADLD A     +G F + G
Sbjct: 192 MISFTGSTAVGRKVGEAAGR-HLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQG 250

Query: 246 QCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIES 305
           Q C A  R  V +++ D + A+   +AK   VGDP    V  GP I+  Q+D++   ++ 
Sbjct: 251 QICMAAGRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDD 310

Query: 306 GKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIER 365
             + GA+L AGG      G + +PTV + V+  M    EEIFGPV  +  F S EE +  
Sbjct: 311 SVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFGPVAPVTVFDSDEEAVAL 367

Query: 366 ANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           AN+++YGL+A + ++D+ +   +   LR G L
Sbjct: 368 ANDTEYGLSAGIISRDVGRAMALADRLRTGML 399

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids. Length = 443

>gnl|CDD|143413 cd07094, ALDH_F21_LactADH-like, ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

 Score =  293 bits (753), Expect = 2e-95
 Identities = 140/351 (39%), Positives = 208/351 (59%), Gaps = 13/351 (3%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-----NGDFFAYTRHEPVGV 108
             + GKP   +  V+V+ ++ TLR  A  A++I G+ IP+     + +  A+T  EPVGV
Sbjct: 68  ACEGGKPIKDA-RVEVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIREPVGV 126

Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
              I P+NFPL ++A K+APA+ATG  +VLKPA +TPL+AL +  ++ EAG+PEGV+ +V
Sbjct: 127 VLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVV 186

Query: 169 PGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA 227
            G     G A      V  ++FTGS  VG+ ++  +G    KR  LELGG +P I+  DA
Sbjct: 187 TGEREVLGDAFAADERVAMLSFTGSAAVGEALRANAG---GKRIALELGGNAPVIVDRDA 243

Query: 228 DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQ 287
           DLDAA+E    G F++ GQ C +  R +V + +YDEF+       K+  VGDP D + + 
Sbjct: 244 DLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDV 303

Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           GP I +E  +++  ++E     GA+L+ GG R    G   +PTV  +V  D K++ EE F
Sbjct: 304 GPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLSTEETF 360

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLI 398
           GPV  +IR+   EE I  AN++DYGL A +FT+DL+      + L  G ++
Sbjct: 361 GPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVM 411

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences. Length = 453

>gnl|CDD|179543 PRK03137, PRK03137, 1-pyrroline-5-carboxylate dehydrogenase; Provisional

 Score =  291 bits (748), Expect = 8e-94
 Identities = 138/358 (38%), Positives = 189/358 (52%), Gaps = 16/358 (4%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKI-HGKTI-PINGDFFAYTRHEPVG 107
           S+    + GKP+  +   D   ++  L YYA    K+  GK +    G+   Y  + P+G
Sbjct: 116 SAWLVKEAGKPWAEA-DADTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRY-FYIPLG 173

Query: 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNI 167
           V   I PWNFP  ++A     A+  GNT++LKPA  TP+ A     ++ EAG+P GVVN 
Sbjct: 174 VGVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNF 233

Query: 168 VPGYGDA-GAALVQHPGVDKVAFTGSTEVG-------KLVQQGSGASNLKRTTLELGGKS 219
           VPG G   G  LV HP    + FTGS EVG         VQ G     LKR   E+GGK 
Sbjct: 234 VPGSGSEVGDYLVDHPKTRFITFTGSREVGLRIYERAAKVQPGQ--IWLKRVIAEMGGKD 291

Query: 220 PNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGD 279
             ++  DADLD A E      F   GQ C A SR  V + +YDE + +  E  K  TVG+
Sbjct: 292 AIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYDEVLEKVVELTKELTVGN 351

Query: 280 PFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDM 339
           P D N   GP I++   DKI+ +IE GK +G +LV GG     KG+++QPT+FA+V    
Sbjct: 352 PED-NAYMGPVINQASFDKIMSYIEIGKEEG-RLVLGGEGDDSKGYFIQPTIFADVDPKA 409

Query: 340 KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           +I +EEIFGPV   I+    +  +E ANN++YGL  AV + + +      +    G L
Sbjct: 410 RIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNL 467

Length = 514

>gnl|CDD|143423 cd07105, ALDH_SaliADH, Salicylaldehyde dehydrogenase, DoxF-like

 Score =  287 bits (736), Expect = 5e-93
 Identities = 137/336 (40%), Positives = 188/336 (55%), Gaps = 16/336 (4%)

Query: 68  DVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKI 126
           +V+ +   LR  A    +I G +IP       A    EPVGV   I PWN P+++    I
Sbjct: 60  NVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGVVLGIAPWNAPVILGTRAI 119

Query: 127 APALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV---PGYGDAGA---ALVQ 180
           A  LA GNT+VLK +E +P T   +G +  EAG+P+GV+N+V   P   DA     AL+ 
Sbjct: 120 AYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPE--DAPEVVEALIA 177

Query: 181 HPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGL 240
           HP V KV FTGST VG+++ + + A +LK   LELGGK+P I+  DADLDAA   A FG 
Sbjct: 178 HPAVRKVNFTGSTRVGRIIAE-TAAKHLKPVLLELGGKAPAIVLEDADLDAAANAALFGA 236

Query: 241 FFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKIL 300
           F N GQ C +  R  V ++I DEFV +    A++   G      V  G  +     D++ 
Sbjct: 237 FLNSGQICMSTERIIVHESIADEFVEKLKAAAEKLFAGP-----VVLGSLVSAAAADRVK 291

Query: 301 EFIESGKSQGAQLVAGG-GRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSI 359
           E ++   S+GA+LV GG       G  + PT+  NV  DM I  EE FGPV  +IR    
Sbjct: 292 ELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYSEESFGPVVSIIRVKDE 351

Query: 360 EEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           EE +  AN+S+YGL+AAVFT+DL +   V + + +G
Sbjct: 352 EEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESG 387

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD. Length = 432

>gnl|CDD|236501 PRK09407, gabD2, succinic semialdehyde dehydrogenase; Reviewed

 Score =  288 bits (740), Expect = 2e-92
 Identities = 129/330 (39%), Positives = 184/330 (55%), Gaps = 14/330 (4%)

Query: 75  TLRYYAGFADKI-----HGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPA 129
           T RYYA  A K+         +P+          +P GV G I PWN+PL +      PA
Sbjct: 121 TARYYARRAPKLLAPRRRAGALPVLTK--TTELRQPKGVVGVISPWNYPLTLAVSDAIPA 178

Query: 130 LATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA 188
           L  GN +VLKP  QTPLTALA   L+ EAG+P  +  +V G G   G ALV +   D + 
Sbjct: 179 LLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--ADYLM 236

Query: 189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCC 248
           FTGST  G+++ + +G   L   +LELGGK+P I+  DADLD A  GA    F N GQ C
Sbjct: 237 FTGSTATGRVLAEQAG-RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLC 295

Query: 249 CAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKS 308
            +  R +V ++IYDEFV       +   +G  +D + + G  I + Q++ +   ++   +
Sbjct: 296 ISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVA 355

Query: 309 QGAQLVAGGGRAGDKG--FYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERA 366
           +GA ++AGG    D G  FY +PTV   V  DM++AREE FGPV  +   + ++E +ERA
Sbjct: 356 KGATVLAGGKARPDLGPLFY-EPTVLTGVTPDMELAREETFGPVVSVYPVADVDEAVERA 414

Query: 367 NNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           N++ YGL A+V+T D  +   +   +RAGT
Sbjct: 415 NDTPYGLNASVWTGDTARGRAIAARIRAGT 444

Length = 524

>gnl|CDD|143465 cd07147, ALDH_F21_RNP123, Aldehyde dehydrogenase family 21A1-like

 Score =  284 bits (730), Expect = 6e-92
 Identities = 122/350 (34%), Positives = 192/350 (54%), Gaps = 12/350 (3%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGD-----FFAYTRHEPVGV 108
            L+ GKP   +   +V  ++ T R  A  A +I+G+ +P++            R  P+G 
Sbjct: 68  VLEAGKPIKDA-RGEVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRFPIGP 126

Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
              I P+NFPL ++A K+APA+A G   VLKPA +TPL+AL +G ++AE G+P+G  +++
Sbjct: 127 VSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVL 186

Query: 169 PGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           P   D    LV    +  ++FTGS  VG  ++  +G    K+  LELGG +  I+ +DAD
Sbjct: 187 PCSRDDADLLVTDERIKLLSFTGSPAVGWDLKARAGK---KKVVLELGGNAAVIVDSDAD 243

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD A +   FG F+  GQ C +  R  V  ++YDEF +R   R K    GDP D   + G
Sbjct: 244 LDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVG 303

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           P I + + +++  ++      GA+L+ GG R    G  ++PT+  +V  DM++  EE+FG
Sbjct: 304 PMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCEEVFG 360

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLI 398
           PV  +  +   +E +   N+S +GL A VFT+DL+K       L  G ++
Sbjct: 361 PVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVV 410

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD. Length = 452

>gnl|CDD|182233 PRK10090, PRK10090, aldehyde dehydrogenase A; Provisional

 Score =  280 bits (719), Expect = 9e-91
 Identities = 131/359 (36%), Positives = 201/359 (55%), Gaps = 17/359 (4%)

Query: 58  GKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP---INGDFFAYTRHEPVGVCGQIIP 114
           GK   ++  V+V ++   + Y A +A +  G+ I       +   + R   +GV   I+P
Sbjct: 24  GKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKR--ALGVTTGILP 80

Query: 115 WNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGD- 173
           WNFP  ++A K+APAL TGNTIV+KP+E TP  A+A   ++ E G+P+GV N+V G G+ 
Sbjct: 81  WNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGET 140

Query: 174 AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAV 233
            G  L  +P V  V+ TGS   G+ +   + A N+ +  LELGGK+P I+  DADLD AV
Sbjct: 141 VGQELAGNPKVAMVSMTGSVSAGEKIMA-AAAKNITKVCLELGGKAPAIVMDDADLDLAV 199

Query: 234 EGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFD-LNVEQGPQID 292
           +        N GQ C    R +VQ  IYD+FV R GE  +    G+P +  ++  GP I+
Sbjct: 200 KAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLIN 259

Query: 293 KEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQ 352
              ++++ + +     +GA++  GG     KG+Y  PT+  +VR +M I  EE FGPV  
Sbjct: 260 AAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLP 319

Query: 353 LIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIERAN 411
           ++ F ++EE I  AN+SDYGL ++++T++L+      +GL+ G        E  I R N
Sbjct: 320 VVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG--------ETYINREN 370

Length = 409

>gnl|CDD|143420 cd07102, ALDH_EDX86601, Uncharacterized aldehyde dehydrogenase of Synechococcus sp

 Score =  280 bits (719), Expect = 3e-90
 Identities = 123/324 (37%), Positives = 172/324 (53%), Gaps = 5/324 (1%)

Query: 77  RYYAGFADK-IHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNT 135
           RY    A++ +    +P    F  Y R EP+GV   I PWN+P L     + PAL  GN 
Sbjct: 87  RYMISIAEEALADIRVPEKDGFERYIRREPLGVVLIIAPWNYPYLTAVNAVIPALLAGNA 146

Query: 136 IVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEV 195
           ++LK + QTPL      A  AEAG+PEGV  ++    +  AAL+  P +D V+FTGS   
Sbjct: 147 VILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVSFTGSVAG 206

Query: 196 GKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTF 255
           G+ +Q+ + A    +  LELGGK P  +  DADLDAA E    G FFN GQ CC+  R +
Sbjct: 207 GRAIQR-AAAGRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIY 265

Query: 256 VQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVA 315
           V ++IYD FV       K   +GDP D +   GP +     D +   I    ++GA+ + 
Sbjct: 266 VHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALI 325

Query: 316 GGGR---AGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYG 372
            G         G Y+ PTV  NV   M++ REE FGPV  +++  S  E I   N+S+YG
Sbjct: 326 DGALFPEDKAGGAYLAPTVLTNVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYG 385

Query: 373 LAAAVFTKDLDKTNYVTQGLRAGT 396
           L A+V+TKD+ +   + + L  GT
Sbjct: 386 LTASVWTKDIARAEALGEQLETGT 409

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD. Length = 452

>gnl|CDD|143419 cd07101, ALDH_SSADH2_GabD2, Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

 Score =  279 bits (717), Expect = 6e-90
 Identities = 131/332 (39%), Positives = 184/332 (55%), Gaps = 18/332 (5%)

Query: 75  TLRYYAGFADKI-----HGKTIPINGDFFAYTR--HEPVGVCGQIIPWNFPLLMLAWKIA 127
             RYYA  A+++         IP+       T     P GV G I PWN+PL +      
Sbjct: 85  VARYYARRAERLLKPRRRRGAIPV----LTRTTVNRRPKGVVGVISPWNYPLTLAVSDAI 140

Query: 128 PALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK 186
           PAL  GN +VLKP  QT LTAL    L+ EAG+P  +  +V G G + G A+V +   D 
Sbjct: 141 PALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--ADY 198

Query: 187 VAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQ 246
           V FTGST  G++V + +G   L   +LELGGK+P I+  DADLD A  GA    F N GQ
Sbjct: 199 VMFTGSTATGRVVAERAG-RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQ 257

Query: 247 CCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESG 306
            C +  R +V +++YDEFV R   R +   +G   D   + G  I + Q+D++   ++  
Sbjct: 258 LCVSIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDA 317

Query: 307 KSQGAQLVAGGGRAGDKG--FYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIE 364
            ++GA ++AGG    D G  FY +PTV   V +DM++  EE FGPV  + R +  +E IE
Sbjct: 318 VAKGATVLAGGRARPDLGPYFY-EPTVLTGVTEDMELFAEETFGPVVSIYRVADDDEAIE 376

Query: 365 RANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
            AN++DYGL A+V+T+D  +   +   LRAGT
Sbjct: 377 LANDTDYGLNASVWTRDGARGRRIAARLRAGT 408

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s). Length = 454

>gnl|CDD|143464 cd07146, ALDH_PhpJ, Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

 Score =  275 bits (706), Expect = 3e-88
 Identities = 127/337 (37%), Positives = 186/337 (55%), Gaps = 12/337 (3%)

Query: 67  VDVEYSLRTLRYYAGFADKIHGKTIPIN-----GDFFAYTRHEPVGVCGQIIPWNFPLLM 121
            +V  +   LR+ A  A +  G++   +          +T  EP+GV   I P+N PL  
Sbjct: 77  YEVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTLREPLGVVLAITPFNHPLNQ 136

Query: 122 LAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG-YGDAGAALVQ 180
           +A KIAPA+A  N IVLKP+E+TPL+A+ +  L+ EAG+P  ++++V G  G+ G  L+ 
Sbjct: 137 VAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELIT 196

Query: 181 HPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGL 240
           HP VD V FTG   VGK +   +  +  KR  LELGG  P I+  DADL+ A   A  G 
Sbjct: 197 HPDVDLVTFTGGVAVGKAI---AATAGYKRQLLELGGNDPLIVMDDADLERAATLAVAGS 253

Query: 241 FFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKIL 300
           + N GQ C A  R  V +++ DEFV    E++    VGDP D   + G  ID+E   +I 
Sbjct: 254 YANSGQRCTAVKRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIE 313

Query: 301 EFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIE 360
             +E   +QGA+++ G  R   +G    PTV  +V  D ++  EE FGPV  +IR   ++
Sbjct: 314 NRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAELVTEETFGPVAPVIRVKDLD 370

Query: 361 EVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           E I  +N++ YGL++ V T DLD    + + L  GT+
Sbjct: 371 EAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTV 407

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD. Length = 451

>gnl|CDD|143401 cd07082, ALDH_F11_NP-GAPDH, NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

 Score =  274 bits (702), Expect = 2e-87
 Identities = 138/363 (38%), Positives = 196/363 (53%), Gaps = 22/363 (6%)

Query: 43  NEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFF---- 98
            E  N    L   + GK    +   +V+ ++  +R       ++ G ++P  GD+F    
Sbjct: 79  EEVAN----LLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLP--GDWFPGTK 131

Query: 99  ---AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALI 155
              A  R EP+GV   I P+N+PL +   K+ PAL  GNT+V KPA Q  L  + +    
Sbjct: 132 GKIAQVRREPLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAF 191

Query: 156 AEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVG-KLVQQGSGASNLKRTTL 213
            +AG P+GVVN+V G G + G  LV H  +D ++FTGSTEVG +L +Q      +KR  L
Sbjct: 192 HDAGFPKGVVNVVTGRGREIGDPLVTHGRIDVISFTGSTEVGNRLKKQHP----MKRLVL 247

Query: 214 ELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAK 273
           ELGGK P I+  DADL+ A +    G     GQ C A  R  V +++ DE V    E   
Sbjct: 248 ELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADELVELLKEEVA 307

Query: 274 RRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFA 333
           +  VG P+D  V+  P ID +  D +   I+   ++GA ++ GGGR G     + PT+  
Sbjct: 308 KLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGN--LIYPTLLD 365

Query: 334 NVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR 393
            V  DM++A EE FGPV  +IR + IEE IE AN S+YGL A++FTKD++K   +   L 
Sbjct: 366 PVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALE 425

Query: 394 AGT 396
            GT
Sbjct: 426 VGT 428

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants. Length = 473

>gnl|CDD|143404 cd07085, ALDH_F6_MMSDH, Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

 Score =  270 bits (693), Expect = 6e-86
 Identities = 113/297 (38%), Positives = 163/297 (54%), Gaps = 13/297 (4%)

Query: 93  INGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVG 152
           +      Y+  +P+GV   I P+NFP ++  W    A+A GNT VLKP+E+ P  A+ + 
Sbjct: 124 VARGIDTYSYRQPLGVVAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLA 183

Query: 153 ALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTT 212
            L+ EAG+P+GV+N+V G  +A  AL+ HP +  V+F GST VG+ + +   A+N KR  
Sbjct: 184 ELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVSFVGSTPVGEYIYE-RAAANGKRVQ 242

Query: 213 LELGGKSPNIIFADADLDAAVE---GAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG 269
              G K+  ++  DADL+       GA FG     GQ C A S         DE++ +  
Sbjct: 243 ALGGAKNHAVVMPDADLEQTANALVGAAFG---AAGQRCMALSVAVAVGDEADEWIPKLV 299

Query: 270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGR-----AGDKG 324
           ERAK+  VG   D   + GP I     ++I   IESG  +GA+LV   GR       + G
Sbjct: 300 ERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVL-DGRGVKVPGYENG 358

Query: 325 FYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKD 381
            +V PT+  NV  DMKI +EEIFGPV  ++R  +++E I   N + YG  AA+FT+ 
Sbjct: 359 NFVGPTILDNVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRS 415

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD. Length = 478

>gnl|CDD|132417 TIGR03374, ABALDH, 1-pyrroline dehydrogenase

 Score =  267 bits (684), Expect = 6e-85
 Identities = 140/376 (37%), Positives = 212/376 (56%), Gaps = 15/376 (3%)

Query: 30  TKPKIEHTQLFINNEFV--NAQ--SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADK 85
           T PK     L    + +  NAQ  + LE+ + GKP +  ++ ++   +   R++AG A  
Sbjct: 57  TTPKARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARC 116

Query: 86  IHGKTIPINGDFF----AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPA 141
           + G      G++     +  R +P+GV   I PWN+PL+M AWK+APALA GN +VLKP+
Sbjct: 117 LSGLAA---GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPS 173

Query: 142 EQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQ 200
           E TPLTAL +  L  +   P GVVNI+ G G   G  L  H  V  V+ TGS   G+ + 
Sbjct: 174 EITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMVSLTGSIATGEHIL 232

Query: 201 QGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTI 260
             + A ++KRT +ELGGK+P I+F DAD+DA VEG     F+N GQ C A  R + Q  I
Sbjct: 233 SHT-APSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGI 291

Query: 261 YDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQG-AQLVAGGGR 319
           YD  V + G        G P D + E GP      ++++++ +E  K+ G  +++ GG +
Sbjct: 292 YDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEK 351

Query: 320 AGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFT 379
               G+Y  PT+ A  + D  I ++E+FGPV  +  F   E+V+  AN+S YGLA++V+T
Sbjct: 352 RKGNGYYFAPTLLAGAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWT 411

Query: 380 KDLDKTNYVTQGLRAG 395
           KD+ + + ++  L+ G
Sbjct: 412 KDVGRAHRLSARLQYG 427

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family. Length = 472

>gnl|CDD|183050 PRK11241, gabD, succinate-semialdehyde dehydrogenase I; Provisional

 Score =  267 bits (683), Expect = 1e-84
 Identities = 142/347 (40%), Positives = 205/347 (59%), Gaps = 6/347 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGVCG 110
           L TL+ GKP   +   ++ Y+   + ++A    +I+G TIP +  D       +P+GV  
Sbjct: 93  LMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTA 151

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
            I PWNFP  M+  K  PALA G T+VLKPA QTP +ALA+  L   AGIP GV N+V G
Sbjct: 152 AITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTG 211

Query: 171 Y-GDAGAALVQHPGVDKVAFTGSTEVGK-LVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
             G  G  L  +P V K++FTGSTE+G+ L++Q   A ++K+ +LELGG +P I+F DAD
Sbjct: 212 SAGAVGGELTSNPLVRKLSFTGSTEIGRQLMEQC--AKDIKKVSLELGGNAPFIVFDDAD 269

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD AVEGA    F N GQ C   +R +VQD +YD F  +  +   +  +GD  +  V  G
Sbjct: 270 LDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIG 329

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           P ID++ + K+ E I     +GA++V GG      G + QPT+  +V  + K+A+EE FG
Sbjct: 330 PLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETFG 389

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           P+  L RF    +VI +AN++++GLAA  + +DL +   V + L  G
Sbjct: 390 PLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYG 436

Length = 482

>gnl|CDD|143416 cd07098, ALDH_F15-22, Aldehyde dehydrogenase family 15A1 and 22A1-like

 Score =  265 bits (679), Expect = 4e-84
 Identities = 111/305 (36%), Positives = 160/305 (52%), Gaps = 9/305 (2%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
           A   +EP+GV G I+ WN+P   L   I  AL  GN IV+K +EQ   ++    ++I E 
Sbjct: 114 ARVEYEPLGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIREC 173

Query: 159 ----GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLE 214
               G    +V +V    +   AL  HP +D + F GS  VGK V   + A +L    LE
Sbjct: 174 LAACGHDPDLVQLVTCLPETAEALTSHPVIDHITFIGSPPVGKKVMA-AAAESLTPVVLE 232

Query: 215 LGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKR 274
           LGGK P I+  DADLD        G F + GQ C    R  V + IYD+ +    +R + 
Sbjct: 233 LGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIYDKLLEILTDRVQA 292

Query: 275 RTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD----KGFYVQPT 330
              G P D +V+ G  I   + D++ E +     +GA+L+AGG R       +G Y  PT
Sbjct: 293 LRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPT 352

Query: 331 VFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQ 390
           +  +V  DMKIA+EE+FGPV  +++ S  EE +E AN+++YGL A+VF KD+ +   +  
Sbjct: 353 LLVDVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIAS 412

Query: 391 GLRAG 395
            L  G
Sbjct: 413 QLETG 417

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation. Length = 465

>gnl|CDD|200087 TIGR01237, D1pyr5carbox2, delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

 Score =  257 bits (659), Expect = 1e-80
 Identities = 137/358 (38%), Positives = 193/358 (53%), Gaps = 15/358 (4%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKI--HGKTIPINGDFFAYTRHEPVG 107
           S+L   + GKP+N +   +V  ++  + YYA    ++          G+   Y  + P G
Sbjct: 112 SALLVKEVGKPWNEA-DAEVAEAIDFMEYYARQMIELAKGKPVNSREGETNQYV-YTPTG 169

Query: 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNI 167
           V   I PWNFP  ++       + TGN +VLKPAE  P+ A     ++ EAG+P+GVV  
Sbjct: 170 VTVVISPWNFPFAIMVGMTVAPIVTGNCVVLKPAEAAPVIAAKFVEILEEAGLPKGVVQF 229

Query: 168 VPGYG-DAGAALVQHPGVDKVAFTGSTEVG-------KLVQQGSGASNLKRTTLELGGKS 219
           VPG G + G  LV HP    + FTGS EVG         VQ G    +LKR   E+GGK 
Sbjct: 230 VPGSGSEVGDYLVDHPKTSLITFTGSREVGTRIFERAAKVQPGQ--KHLKRVIAEMGGKD 287

Query: 220 PNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGD 279
             I+  DAD++ A + A    F   GQ C AGSR  V + +YDE V R  E  +   VG 
Sbjct: 288 TVIVDEDADIELAAQSAFTSAFGFAGQKCSAGSRAVVHEKVYDEVVERFVEITESLKVGP 347

Query: 280 PFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDM 339
           P   +V  GP ID++  +KI+E+IE GK++G +LV+GG     KG+++ PT+FA+V    
Sbjct: 348 PDSADVYVGPVIDQKSFNKIMEYIEIGKAEG-RLVSGGCGDDSKGYFIGPTIFADVDRKA 406

Query: 340 KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           ++A+EEIFGPV   IR S  +E +E ANN++YGL   V + + D  N        G L
Sbjct: 407 RLAQEEIFGPVVAFIRASDFDEALEIANNTEYGLTGGVISNNRDHINRAKAEFEVGNL 464

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs [Energy metabolism, Amino acids and amines]. Length = 511

>gnl|CDD|212007 TIGR04284, aldehy_Rv0768, aldehyde dehydrogenase, Rv0768 family

 Score =  245 bits (626), Expect = 4e-76
 Identities = 128/300 (42%), Positives = 168/300 (56%), Gaps = 5/300 (1%)

Query: 102 RHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE-AGI 160
           R E VGV G I PWNFP  +   K+ PALA GNT+VLKPA  TP  A  +G LIAE    
Sbjct: 138 RREAVGVVGAITPWNFPHQINLAKLGPALAAGNTVVLKPAPDTPWCAAVLGELIAEHTDF 197

Query: 161 PEGVVNIVPGYGDA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKS 219
           P GVVNIV       GA L + P VD V+FTGST  G+ V     A+ LK+  LELGGKS
Sbjct: 198 PPGVVNIVTSSDHRLGALLAKDPRVDMVSFTGSTATGRAVM-ADAAATLKKVFLELGGKS 256

Query: 220 PNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGD 279
             I+  DADL AA   A F +  + GQ C   +R  V    YDE VA +         GD
Sbjct: 257 AFIVLDDADLAAACSMAAFTVCMHAGQGCAITTRLVVPRARYDEAVAAAAATMGSIKPGD 316

Query: 280 PFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDK--GFYVQPTVFANVRD 337
           P D     GP I   Q D++  +++   ++G +   GGGR  D+  GF+V+PTV A + +
Sbjct: 317 PADPGTVCGPVISARQRDRVQSYLDLAVAEGGRFACGGGRPADRDRGFFVEPTVIAGLDN 376

Query: 338 DMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           + ++AREEIFGPV  +I     ++ +  AN+S YGL+  VF  D ++   V   +R GT+
Sbjct: 377 NARVAREEIFGPVLTVIAHDGDDDAVRIANDSPYGLSGTVFGADPERAAAVAARVRTGTV 436

This family describes a branch of the aldehyde dehydrogenase (NAD) family (see pfam00171) that includes Rv0768 from Mycobacterium tuberculosis. All members of this family belong to species predicted to synthesize mycofactocin, suggesting that this enzyme or another upstream or downstream in the same pathway might be mycofactocin-dependent. However, the taxonomic range of this family is not nearly broad enough to make that relationship conclusive [Unknown function, Enzymes of unknown specificity]. Length = 480

>gnl|CDD|143448 cd07130, ALDH_F7_AASADH, NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

 Score =  236 bits (604), Expect = 7e-73
 Identities = 112/282 (39%), Positives = 155/282 (54%), Gaps = 6/282 (2%)

Query: 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GI 160
           P+GV G I  +NFP+ +  W  A AL  GN +V KP+  TPLTA+AV  ++A      G+
Sbjct: 132 PLGVVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGL 191

Query: 161 PEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSP 220
           P  + ++V G  D G ALV+ P V  V+FTGST VG+ V Q + A+   R+ LELGG + 
Sbjct: 192 PGAIASLVCGGADVGEALVKDPRVPLVSFTGSTAVGRQVGQ-AVAARFGRSLLELGGNNA 250

Query: 221 NIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDP 280
            I+  DADLD AV    F      GQ C    R  V ++IYDE + R  +  K+  +GDP
Sbjct: 251 IIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDEVLERLKKAYKQVRIGDP 310

Query: 281 FDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 340
            D     GP   K  +D  L  IE  KSQG  ++ GG      G YV+PT+      D  
Sbjct: 311 LDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTI-VEGLSDAP 369

Query: 341 IAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDL 382
           I +EE F P+  +++F ++EE I   N    GL++++FT DL
Sbjct: 370 IVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDL 411

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer. Length = 474

>gnl|CDD|132294 TIGR03250, PhnAcAld_DH, putative phosphonoacetaldehyde dehydrogenase

 Score =  227 bits (579), Expect = 3e-69
 Identities = 118/313 (37%), Positives = 171/313 (54%), Gaps = 14/313 (4%)

Query: 87  HGKTIPINGDFFAYTRHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTP 145
           HGK   +      +T+ EP+ GV   I P+N P+  +A KIAPA+AT N +V+KP+E+TP
Sbjct: 126 HGKARKV------FTQREPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTP 179

Query: 146 LTALAVGALIAEAGIPEGVVNIVPGY-GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSG 204
           L+AL +  ++ EAG+P  ++ +V G   +    L+ +P VD V FTG   +GK +   +G
Sbjct: 180 LSALYLADILYEAGLPPQMLQVVTGDPREIADELITNPHVDLVTFTGGVAIGKYIAARAG 239

Query: 205 ASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF 264
               +R  LELGG  P I+  DADLD A + A  G + N GQ C A  R  VQ+++ D F
Sbjct: 240 ---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVADRF 296

Query: 265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKG 324
                E+ +    GDP D +V+ G  ID+         +    +QGA+L+ G  R G   
Sbjct: 297 TELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDG--A 354

Query: 325 FYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDK 384
            Y  PTV   V   M + REE FGPV  +IRF  I++ I  +N++ YGL++ V T  LD 
Sbjct: 355 LY-APTVLDRVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDY 413

Query: 385 TNYVTQGLRAGTL 397
                  L+ GT+
Sbjct: 414 ITRFIAELQVGTV 426

This family of genes are members of the pfam00171 NAD-dependent aldehyde dehydrogenase family. These genes are observed in Ralstonia eutropha JMP134, Sinorhizobium meliloti 1021, Burkholderia mallei ATCC 23344, Burkholderia thailandensis E264, Burkholderia cenocepacia AU 1054, Burkholderia pseudomallei K96243 and 1710b, Burkholderia xenovorans LB400, Burkholderia sp. 383 and Polaromonas sp. JS666 in close proximity to the PhnW gene (TIGR02326) encoding 2-aminoethyl phosphonate aminotransferase (which generates phosphonoacetaldehyde) and PhnA (TIGR02335) encoding phosphonoacetate hydrolase (not to be confused with the alkylphosphonate utilization operon protein PhnA modeled by TIGR00686). Additionally, transporters believed to be specific for 2-aminoethyl phosphonate are often present. PhnW is, in other organisms, coupled with PhnX (TIGR01422) for the degradation of phosphonoacetaldehyde (GenProp0238), but PhnX is apparently absent in each of the organisms containing this aldehyde reductase. PhnA, characterized in a strain of Pseudomonas fluorescens that has not het been genome sequenced, is only rarely found outside of the PhnW and aldehyde dehydrogenase context. For instance in Rhodopseudomonas and Bordetella bronchiseptica, where it is adjacent to transporters presumably specific for the import of phosphonoacetate. It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme. Length = 472

>gnl|CDD|181826 PRK09406, gabD1, succinic semialdehyde dehydrogenase; Reviewed

 Score =  210 bits (537), Expect = 3e-63
 Identities = 119/347 (34%), Positives = 171/347 (49%), Gaps = 5/347 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKI---HGKTIPINGDFFAYTRHEPVGV 108
           L TL+ GK    S   +     +  RYYA  A+ +           G   AY R++P+GV
Sbjct: 68  LMTLEMGKTLA-SAKAEALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQPLGV 126

Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
              ++PWNFPL  +    APAL  GN  +LK A   P TAL +  L   AG P+G    +
Sbjct: 127 VLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTL 186

Query: 169 PGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
                A  A+++ P V     TGS   G+ V   +G   +K+T LELGG  P I+   AD
Sbjct: 187 LVGSGAVEAILRDPRVAAATLTGSEPAGRAVAAIAG-DEIKKTVLELGGSDPFIVMPSAD 245

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD A E A      N GQ C A  R  V   +YD F  +   R     VGDP D + + G
Sbjct: 246 LDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVG 305

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           P   ++  D++ + ++   + GA ++ GG R    G++  PTV  ++  DM++  EE+FG
Sbjct: 306 PLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEEVFG 365

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           PV  L R + I+E IE AN + +GL +  +T+D  +       L AG
Sbjct: 366 PVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAG 412

Length = 457

>gnl|CDD|143466 cd07148, ALDH_RL0313, Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

 Score =  209 bits (534), Expect = 8e-63
 Identities = 111/296 (37%), Positives = 161/296 (54%), Gaps = 4/296 (1%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
           A+T  EP+GV   I  +N PL ++  ++APA+A G  +++KPA  TPL+ LA   L+ EA
Sbjct: 118 AFTTREPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEA 177

Query: 159 GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGK 218
           G+PEG    VP        LV  P V   +F GS  VG +++  S  +   R  LE GG 
Sbjct: 178 GLPEGWCQAVPCENAVAEKLVTDPRVAFFSFIGSARVGWMLR--SKLAPGTRCALEHGGA 235

Query: 219 SPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVG 278
           +P I+   ADLDA +     G F++ GQ C +  R FV   I D+F  R    A++  VG
Sbjct: 236 APVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIADDFAQRLAAAAEKLVVG 295

Query: 279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDD 338
           DP D + E GP I   ++D++ E++    + GA+L+ GG R  D  +   PTV  +   D
Sbjct: 296 DPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTY--APTVLLDPPRD 353

Query: 339 MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRA 394
            K++ +EIFGPV  +  +  ++E I +AN+      AAVFTKDLD      + L A
Sbjct: 354 AKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDA 409

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD. Length = 455

>gnl|CDD|143452 cd07134, ALDH_AlkH-like, Pseudomonas putida Aldehyde dehydrogenase AlkH-like

 Score =  207 bits (530), Expect = 2e-62
 Identities = 109/302 (36%), Positives = 156/302 (51%), Gaps = 13/302 (4%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
           +  R+EP GVC  I PWN+P  +    +  A+A GNT +LKP+E TP T+  +  +I EA
Sbjct: 94  SKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA 153

Query: 159 GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGK 218
              E  V +  G  +   AL++ P  D + FTGS  VGK+V   + A +L   TLELGGK
Sbjct: 154 -FDEDEVAVFEGDAEVAQALLELP-FDHIFFTGSPAVGKIVMAAA-AKHLASVTLELGGK 210

Query: 219 SPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVG 278
           SP I+   ADL  A +   +G F N GQ C A    FV +++ D FV       ++    
Sbjct: 211 SPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVHESVKDAFVEHLKAEIEKFYGK 270

Query: 279 DPFDLNVEQGPQ----IDKEQMDKILEFIESGKSQGAQLVAGGG-RAGDKGFYVQPTVFA 333
           D      +  P     ++    D++   ++   ++GA++  GG   A  +  Y+ PTV  
Sbjct: 271 DA---ARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQR--YIAPTVLT 325

Query: 334 NVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR 393
           NV  DMKI +EEIFGPV  +I +  ++EVIE  N     LA  VF+KD    N V     
Sbjct: 326 NVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTS 385

Query: 394 AG 395
           +G
Sbjct: 386 SG 387

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD. Length = 433

>gnl|CDD|143406 cd07087, ALDH_F3-13-14_CALDH-like, ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

 Score =  203 bits (518), Expect = 1e-60
 Identities = 102/305 (33%), Positives = 156/305 (51%), Gaps = 22/305 (7%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAP---ALATGNTIVLKPAEQTPLTALAVGALI 155
           AY   EP+GV   I PWN+PL +    +AP   A+A GNT+VLKP+E  P T+  +  LI
Sbjct: 94  AYVIPEPLGVVLIIGPWNYPLQLA---LAPLIGAIAAGNTVVLKPSELAPATSALLAKLI 150

Query: 156 AEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLEL 215
            +       V +V G  +   AL+  P  D + FTGS  VGK+V + + A +L   TLEL
Sbjct: 151 PKY-FDPEAVAVVEGGVEVATALLAEP-FDHIFFTGSPAVGKIVMEAA-AKHLTPVTLEL 207

Query: 216 GGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRR 275
           GGKSP I+  DA+L+ A     +G F N GQ C A     V ++I DE +    E  K+ 
Sbjct: 208 GGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVHESIKDELI----EELKKA 263

Query: 276 TV---GDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVF 332
                G+    + + G  I++   D++   ++ GK      V  GG+   +  Y+ PT+ 
Sbjct: 264 IKEFYGEDPKESPDYGRIINERHFDRLASLLDDGK------VVIGGQVDKEERYIAPTIL 317

Query: 333 ANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL 392
            +V  D  + +EEIFGP+  ++ +  ++E IE  N+    LA  +F++D      V    
Sbjct: 318 DDVSPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAET 377

Query: 393 RAGTL 397
            +G +
Sbjct: 378 SSGGV 382

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate. Length = 426

>gnl|CDD|143414 cd07095, ALDH_SGSD_AstD, N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

 Score =  198 bits (506), Expect = 7e-59
 Identities = 102/305 (33%), Positives = 143/305 (46%), Gaps = 12/305 (3%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
           A  RH P GV     P+NFP  +    I PAL  GNT+V KP+E TP  A  +  L  EA
Sbjct: 91  AVLRHRPHGVMAVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEA 150

Query: 159 GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGK 218
           G+P GV+N+V G  + G AL  H G+D + FTGS   G L+ +       K   LE+GG 
Sbjct: 151 GLPPGVLNLVQGGRETGEALAAHEGIDGLLFTGSAATGLLLHRQFAGRPGKILALEMGGN 210

Query: 219 SPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFV-QDTIYDEFVARSGERAKRRTV 277
           +P +++  AD+DAA        F   GQ C    R  V    + D F+ R  E AKR  +
Sbjct: 211 NPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERLVEAAKRLRI 270

Query: 278 GDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQP-----TVF 332
           G P       GP I      + L   +   + G + +    R      ++ P     T  
Sbjct: 271 GAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGIIDVTDA 330

Query: 333 ANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL 392
           A+V D      EEIFGP+ Q+ R+   +E I  AN + +GL+A + + D          +
Sbjct: 331 ADVPD------EEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARI 384

Query: 393 RAGTL 397
           RAG +
Sbjct: 385 RAGIV 389

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate. Length = 431

>gnl|CDD|143402 cd07083, ALDH_P5CDH, ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

 Score =  199 bits (507), Expect = 2e-58
 Identities = 119/332 (35%), Positives = 172/332 (51%), Gaps = 13/332 (3%)

Query: 77  RYYAGFADKIHGK---TIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATG 133
           RYYA  A ++       +P  G+    + +  +G    I PWNFP+ +    I   +A G
Sbjct: 124 RYYARAALRLRYPAVEVVPYPGEDNE-SFYVGLGAGVVISPWNFPVAIFTGMIVAPVAVG 182

Query: 134 NTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAFTGS 192
           NT++ KPAE   +    V  +  EAG P GVV  +PG G+  GA L +H  +  + FTGS
Sbjct: 183 NTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRGINFTGS 242

Query: 193 TEVGKLV-----QQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQC 247
            E GK +     +   G +  KR  +E GGK+  I+   AD +  VEG     F   GQ 
Sbjct: 243 LETGKKIYEAAARLAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQK 302

Query: 248 CCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGK 307
           C A SR  +    Y+  + R  +RA+R +VG P +   + GP ID EQ  K+L +IE GK
Sbjct: 303 CSAASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGK 362

Query: 308 SQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRF--SSIEEVIER 365
           ++G QLV GG R   +G++V PTV   V    +IA+EEIFGPV  +IR+      E +E 
Sbjct: 363 NEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEV 421

Query: 366 ANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           AN++ YGL   V+++  +      +    G L
Sbjct: 422 ANSTPYGLTGGVYSRKREHLEEARREFHVGNL 453

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH. Length = 500

>gnl|CDD|143443 cd07125, ALDH_PutA-P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

 Score =  196 bits (501), Expect = 2e-57
 Identities = 116/333 (34%), Positives = 166/333 (49%), Gaps = 23/333 (6%)

Query: 76  LRYYAGFADK------IHGKTIPINGDFFAYTRHEP--VGVCGQIIPWNFPLLMLAWKIA 127
            RYYA  A +      + G T  +NG            V VC  I PWNFPL +   +IA
Sbjct: 137 CRYYAAQARELFSDPELPGPTGELNGLEL-----HGRGVFVC--ISPWNFPLAIFTGQIA 189

Query: 128 PALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK 186
            ALA GNT++ KPAEQTPL A     L+ EAG+P  V+ +VPG G + G ALV HP +D 
Sbjct: 190 AALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDG 249

Query: 187 VAFTGSTEVGKLVQQGSGASNLKRTTL--ELGGKSPNIIFADADLDAAVEGAHFGLFFNM 244
           V FTGSTE  KL+ +     +     L  E GGK+  I+ + A  + AV+      F + 
Sbjct: 250 VIFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSA 309

Query: 245 GQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIE 304
           GQ C A    ++Q+ I + F+           VGDP+DL+ + GP IDK     +    E
Sbjct: 310 GQRCSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTE 369

Query: 305 SGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSS--IEEV 362
             + + A L+A        G++V P +   V         E+FGP+  +IRF +  ++E 
Sbjct: 370 LMRGE-AWLIAPAPLDDGNGYFVAPGIIEIVGIF--DLTTEVFGPILHVIRFKAEDLDEA 426

Query: 363 IERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           IE  N + YGL   + ++D  +  Y  + + AG
Sbjct: 427 IEDINATGYGLTLGIHSRDEREIEYWRERVEAG 459

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Length = 518

>gnl|CDD|143451 cd07133, ALDH_CALDH_CalB, Coniferyl aldehyde dehydrogenase-like

 Score =  191 bits (487), Expect = 5e-56
 Identities = 108/304 (35%), Positives = 160/304 (52%), Gaps = 17/304 (5%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAP---ALATGNTIVLKPAEQTPLTALAVGALI 155
           A   ++P+GV G I+PWN+PL  LA  + P   ALA GN +++KP+E TP T+  +  L+
Sbjct: 95  AEVEYQPLGVVGIIVPWNYPL-YLA--LGPLIAALAAGNRVMIKPSEFTPRTSALLAELL 151

Query: 156 AEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLEL 215
           AE    E  V +V G  D  AA    P  D + FTGST VG+ V + + A NL   TLEL
Sbjct: 152 AEY-FDEDEVAVVTGGADVAAAFSSLP-FDHLLFTGSTAVGRHVMR-AAAENLTPVTLEL 208

Query: 216 GGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRR 275
           GGKSP II  DADL  A E   FG   N GQ C A     V +   +EFVA +     + 
Sbjct: 209 GGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLVPEDKLEEFVAAAKAAVAKM 268

Query: 276 --TVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLV--AGGGRAGDKGFYVQPTV 331
             T+ D    N +    I++    ++   +E  +++GA+++     G        + PT+
Sbjct: 269 YPTLAD----NPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTL 324

Query: 332 FANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQG 391
             NV DDM++ +EEIFGP+  ++ + S++E I+  N     LA   F +D  + + V + 
Sbjct: 325 VLNVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRR 384

Query: 392 LRAG 395
             +G
Sbjct: 385 THSG 388

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD. Length = 434

>gnl|CDD|130783 TIGR01722, MMSDH, methylmalonic acid semialdehyde dehydrogenase

 Score =  190 bits (485), Expect = 1e-55
 Identities = 110/319 (34%), Positives = 168/319 (52%), Gaps = 7/319 (2%)

Query: 68  DVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKI 126
           DV   L  + +  G    + G+T   +      Y+  +P+GVC  I P+NFP ++  W  
Sbjct: 98  DVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGVCAGITPFNFPAMIPLWMF 157

Query: 127 APALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDK 186
             A+A GNT VLKP+E+ P  A+ +  L +EAG P+GV+N+V G  +A   L++HP V  
Sbjct: 158 PIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKA 217

Query: 187 VAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQ 246
           V+F GST +G+ +   +G+++ KR     G K+  ++  DAD DAA +      +   GQ
Sbjct: 218 VSFVGSTPIGRYIHT-TGSAHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQ 276

Query: 247 CCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESG 306
            C A S   V     DE+V    ERA++  +G   D   E GP I  +  D++   I  G
Sbjct: 277 RCMAIS-AAVLVGAADEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGG 335

Query: 307 KSQGAQLVAGGGRAGDKGF----YVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEV 362
            ++GA+++  G      G+    +V PT+   V   MK  +EEIFGPV  ++   ++EE 
Sbjct: 336 AAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQEEIFGPVLCVLEADTLEEA 395

Query: 363 IERANNSDYGLAAAVFTKD 381
           I   N S YG   A+FT+D
Sbjct: 396 IALINASPYGNGTAIFTRD 414

Involved in valine catabolism, methylmalonate-semialdehyde dehydrogenase catalyzes the irreversible NAD+- and CoA-dependent oxidative decarboxylation of methylmalonate semialdehyde to propionyl-CoA. Methylmalonate-semialdehyde dehydrogenase has been characterized in both prokaryotes and eukaryotes, functioning as a mammalian tetramer and a bacterial homodimer. Although similar in monomeric molecular mass and enzymatic activity, the N-terminal sequence in P.aeruginosa does not correspond with the N-terminal sequence predicted for rat liver. Sequence homology to a variety of prokaryotic and eukaryotic aldehyde dehydrogenases places MMSDH in the aldehyde dehydrogenase (NAD+) superfamily (pfam00171), making MMSDH's CoA requirement unique among known ALDHs. Methylmalonate semialdehyde dehydrogenase is closely related to betaine aldehyde dehydrogenase, 2-hydroxymuconic semialdehyde dehydrogenase, and class 1 and 2 aldehyde dehydrogenase. In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus [Energy metabolism, Amino acids and amines]. Length = 477

>gnl|CDD|143454 cd07136, ALDH_YwdH-P39616, Bacillus subtilis aldehyde dehydrogenase ywdH-like

 Score =  189 bits (482), Expect = 4e-55
 Identities = 99/300 (33%), Positives = 158/300 (52%), Gaps = 16/300 (5%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAP---ALATGNTIVLKPAEQTPLTALAVGALI 155
           +Y  +EP GV   I PWN+P  +    +AP   A+A GNT VLKP+E TP T+  +  +I
Sbjct: 94  SYIYYEPYGVVLIIAPWNYPFQLA---LAPLIGAIAAGNTAVLKPSELTPNTSKVIAKII 150

Query: 156 AEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLEL 215
            E    E  V +V G  +    L+     D + FTGS  VGK+V + + A +L   TLEL
Sbjct: 151 EET-FDEEYVAVVEGGVEENQELLDQK-FDYIFFTGSVRVGKIVME-AAAKHLTPVTLEL 207

Query: 216 GGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRR 275
           GGKSP I+  DA+L  A +   +G F N GQ C A     V +++ ++F+    E  K+ 
Sbjct: 208 GGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVHESVKEKFIKELKEEIKKF 267

Query: 276 TVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANV 335
              DP + + + G  I+++  D++   +++GK      +  GG    +  Y++PT+  NV
Sbjct: 268 YGEDPLE-SPDYGRIINEKHFDRLAGLLDNGK------IVFGGNTDRETLYIEPTILDNV 320

Query: 336 RDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
             D  + +EEIFGP+  ++ + +++E IE   +    LA  +F++D      V + L  G
Sbjct: 321 TWDDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFG 380

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD. Length = 449

>gnl|CDD|184426 PRK13968, PRK13968, putative succinate semialdehyde dehydrogenase; Provisional

 Score =  183 bits (465), Expect = 1e-52
 Identities = 99/283 (34%), Positives = 144/283 (50%), Gaps = 1/283 (0%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
           A   + P+G    I+PWNFPL  +     P L  GN  +LK A      A  +  +  +A
Sbjct: 120 AVIEYRPLGTILAIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDA 179

Query: 159 GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGK 218
           GIP+GV   +    D  + ++    +  V  TGS   G  +   +GA+ LK+  LELGG 
Sbjct: 180 GIPQGVYGWLNADNDGVSQMINDSRIAAVTVTGSVRAGAAIGAQAGAA-LKKCVLELGGS 238

Query: 219 SPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVG 278
            P I+  DADL+ AV+ A  G + N GQ C A  R  +++ I   F  R    A    +G
Sbjct: 239 DPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVAAAAALKMG 298

Query: 279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDD 338
           DP D     GP    +  D++   +E+  ++GA+L+ GG +    G Y  PTV ANV  +
Sbjct: 299 DPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPE 358

Query: 339 MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKD 381
           M   REE+FGPV  +      E  +E AN+S++GL+A +FT D
Sbjct: 359 MTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTD 401

Length = 462

>gnl|CDD|215110 PLN00412, PLN00412, NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

 Score =  182 bits (463), Expect = 4e-52
 Identities = 105/294 (35%), Positives = 157/294 (53%), Gaps = 9/294 (3%)

Query: 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGV 164
           P+GV   I P+N+P+ +   KIAPAL  GN +VLKP  Q  + AL +      AG P+G+
Sbjct: 158 PLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGL 217

Query: 165 VNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNII 223
           ++ V G G + G  L  HPGV+ ++FTG  + G  + + +G   L+   +ELGGK   I+
Sbjct: 218 ISCVTGKGSEIGDFLTMHPGVNCISFTGG-DTGIAISKKAGMVPLQ---MELGGKDACIV 273

Query: 224 FADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDL 283
             DADLD A      G F   GQ C A     V +++ D  V +   +  + TVG P D 
Sbjct: 274 LEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESVADALVEKVNAKVAKLTVGPPED- 332

Query: 284 NVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR 343
           + +  P + +   + I   +   K +GA       R G+    + P +  NVR DM+IA 
Sbjct: 333 DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGN---LIWPLLLDNVRPDMRIAW 389

Query: 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           EE FGPV  +IR +S+EE I   N S++GL   VFT+D++K   ++  +  GT+
Sbjct: 390 EEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTV 443

Length = 496

>gnl|CDD|143453 cd07135, ALDH_F14-YMR110C, Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

 Score =  180 bits (459), Expect = 6e-52
 Identities = 93/297 (31%), Positives = 153/297 (51%), Gaps = 8/297 (2%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
              R EP+GV   I PWN+P+L+    +  A+A G T+VLKP+E TP TA  +  L+ + 
Sbjct: 102 PRIRKEPLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPKY 161

Query: 159 GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGK 218
            +      +V G      AL++    DK+ +TGS  VG+++ + + A +L   TLELGGK
Sbjct: 162 -LDPDAFQVVQGGVPETTALLEQ-KFDKIFYTGSGRVGRIIAE-AAAKHLTPVTLELGGK 218

Query: 219 SPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVG 278
           SP I+  +ADL+ A +   +G F N GQ C A     V  ++YDEFV    +       G
Sbjct: 219 SPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEFVEELKKVLDEFYPG 278

Query: 279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDD 338
                  +    ++    +++   +++ K    ++V GG       F + PT+ ++V  D
Sbjct: 279 GANASP-DYTRIVNPRHFNRLKSLLDTTK---GKVVIGGEMDEATRF-IPPTIVSDVSWD 333

Query: 339 MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
             +  EE+FGPV  +I+   ++E I+  N+ D  LA  +FT D  + +++    R+G
Sbjct: 334 DSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSG 390

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD. Length = 436

>gnl|CDD|181873 PRK09457, astD, succinylglutamic semialdehyde dehydrogenase; Reviewed

 Score =  180 bits (459), Expect = 1e-51
 Identities = 107/312 (34%), Positives = 149/312 (47%), Gaps = 29/312 (9%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
           A  RH P GV     P+NFP  +    I PAL  GNT+V KP+E TP  A     L  +A
Sbjct: 128 AVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQA 187

Query: 159 GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGK 218
           G+P GV+N+V G  + G AL  HP +D + FTGS   G L+ +       K   LE+GG 
Sbjct: 188 GLPAGVLNLVQGGRETGKALAAHPDIDGLLFTGSANTGYLLHRQFAGQPEKILALEMGGN 247

Query: 219 SPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY-DEFVARSGERAKRRTV 277
           +P +I   AD+DAAV       F + GQ C    R  V      D F+AR    AKR TV
Sbjct: 248 NPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARLVAVAKRLTV 307

Query: 278 GDPFDLNVE-QGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA--------GDKGFYVQ 328
           G          G  I ++    ++       +Q AQL+A GG++           G  + 
Sbjct: 308 GRWDAEPQPFMGAVISEQAAQGLVA------AQ-AQLLALGGKSLLEMTQLQAGTGL-LT 359

Query: 329 P-----TVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLD 383
           P     T  A + D      EE FGP+ Q++R+   +E I  ANN+ +GL+A + + D +
Sbjct: 360 PGIIDVTGVAELPD------EEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDRE 413

Query: 384 KTNYVTQGLRAG 395
             +     +RAG
Sbjct: 414 DYDQFLLEIRAG 425

Length = 487

>gnl|CDD|233325 TIGR01238, D1pyr5carbox3, delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

 Score =  177 bits (450), Expect = 3e-50
 Identities = 111/348 (31%), Positives = 162/348 (46%), Gaps = 22/348 (6%)

Query: 58  GKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNF 117
           GK  + + + +V  ++   RYYA               D       E  GV   I PWNF
Sbjct: 125 GKTIHNAIA-EVREAVDFCRYYAKQVR-----------DVLGEFSVESRGVFVCISPWNF 172

Query: 118 PLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGA 176
           PL +   +I+ ALA GNT++ KPAEQT L A     L+ EAG P G + ++PG G D GA
Sbjct: 173 PLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGA 232

Query: 177 ALVQHPGVDKVAFTGSTEVGKLVQQ--GSGASNLKRTTLELGGKSPNIIFADADLDAAVE 234
           AL   P +  VAFTGSTEV +L+ Q              E GG++  I+ + A  +  V 
Sbjct: 233 ALTSDPRIAGVAFTGSTEVAQLINQTLAQREDAPVPLIAETGGQNAMIVDSTALPEQVVR 292

Query: 235 GAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKE 294
                 F + GQ C A     VQ+ + D  +       +   VG P  L  + GP ID E
Sbjct: 293 DVLRSAFDSAGQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAE 352

Query: 295 QMDKILEFIESGKSQG---AQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQ 351
               +L  IE         AQL     RA   G +V PT+F    DD+    EE+FGPV 
Sbjct: 353 AKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFE--LDDIAELSEEVFGPVL 410

Query: 352 QLIRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            ++R+ +  +++++++ N + YGL   V ++      ++ +  R G  
Sbjct: 411 HVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNC 458

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase [Energy metabolism, Amino acids and amines]. Length = 500

>gnl|CDD|237018 PRK11905, PRK11905, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  182 bits (465), Expect = 3e-50
 Identities = 111/333 (33%), Positives = 168/333 (50%), Gaps = 29/333 (8%)

Query: 76  LRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNT 135
           LRYYA  A                   H+P+G    I PWNFPL +   +IA AL  GNT
Sbjct: 658 LRYYAAQAR-----------RLLNGPGHKPLGPVVCISPWNFPLAIFTGQIAAALVAGNT 706

Query: 136 IVLKPAEQTPLTAL-AVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAFTGST 193
           ++ KPAEQTPL A  AV  L+ EAG+P+  + ++PG G   GAALV  P +  V FTGST
Sbjct: 707 VLAKPAEQTPLIAARAV-RLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMFTGST 765

Query: 194 EVGKLVQQGSGASNLKRTTL---ELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCA 250
           EV +L+Q+ + A           E GG++  I+ + A  +  V       F + GQ C A
Sbjct: 766 EVARLIQR-TLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSA 824

Query: 251 GSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQG 310
                +Q+ + D  +           +GDP+ L+ + GP ID E    I   IE+ ++ G
Sbjct: 825 LRVLCLQEDVADRVLTMLKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAG 884

Query: 311 AQL-VAGGGRAGDKGFYVQPTVF--ANVRDDMKIAREEIFGPVQQLIRF--SSIEEVIER 365
             +         +KG +V PT+    ++  D++    E+FGPV  ++RF    ++ VI+ 
Sbjct: 885 RLVHQLPLPAETEKGTFVAPTLIEIDSIS-DLE---REVFGPVLHVVRFKADELDRVIDD 940

Query: 366 ANNSDYGLAAAVFTKDLDKT-NYVTQGLRAGTL 397
            N + YGL   + ++ +D+T  +VT  +RAG +
Sbjct: 941 INATGYGLTFGLHSR-IDETIAHVTSRIRAGNI 972

Length = 1208

>gnl|CDD|226683 COG4230, COG4230, Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

 Score =  179 bits (457), Expect = 1e-49
 Identities = 118/332 (35%), Positives = 170/332 (51%), Gaps = 27/332 (8%)

Query: 76  LRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNT 135
           LRYYAG A            D F    H P+G    I PWNFPL +   +IA ALA GN+
Sbjct: 218 LRYYAGQAR-----------DTFGNLTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNS 266

Query: 136 IVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAFTGSTE 194
           ++ KPAEQTPL A     L+ EAG+P GV+ ++PG G+  GAAL     V  V FTGSTE
Sbjct: 267 VLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALTADARVAGVMFTGSTE 326

Query: 195 VGKLVQQGSGASNLKRTTL--ELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGS 252
           V +L+Q+       +   L  E GG++  I+ + A  +  V       F + GQ C A  
Sbjct: 327 VARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALR 386

Query: 253 RTFVQDTIYDEFVAR-SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQG- 310
              +Q+ + D  +    G  A+ R VG+P  L  + GP ID E    I + I++ +S+G 
Sbjct: 387 VLCLQEDVADRILTMLKGAMAELR-VGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGR 445

Query: 311 --AQLVAGGGRAGDKGFYVQPTVFA-NVRDDMKIAREEIFGPVQQLIRF--SSIEEVIER 365
              Q  A       KG +V PT+      D+++    E+FGPV  ++R+    ++EVI++
Sbjct: 446 LVHQAAAPNSLQ--KGTFVAPTLIELENLDELQ---REVFGPVLHVVRYKRDELDEVIDQ 500

Query: 366 ANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            N + YGL   V T+  +   +VT+   AG L
Sbjct: 501 INATGYGLTLGVHTRIDETIAHVTERAHAGNL 532

Length = 769

>gnl|CDD|132284 TIGR03240, arg_catab_astD, succinylglutamic semialdehyde dehydrogenase

 Score =  173 bits (441), Expect = 4e-49
 Identities = 106/309 (34%), Positives = 150/309 (48%), Gaps = 15/309 (4%)

Query: 95  GDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGAL 154
            D  A  RH P GV     P+NFP  +    I PAL  GNT+V KP+E TP  A     L
Sbjct: 122 PDGRAVLRHRPHGVVAVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKL 181

Query: 155 IAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLE 214
             +AG+P GV+N+V G  + G AL  HP +D + FTGS+  G L+ +       K   LE
Sbjct: 182 WEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLFTGSSNTGHLLHRQFAGRPEKILALE 241

Query: 215 LGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY-DEFVARSGERAK 273
           +GG +P I+   AD+DAAV       F + GQ C    R  V D    D F+AR  E A+
Sbjct: 242 MGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARLVEVAE 301

Query: 274 RRTVGD------PFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQ-LVAGGGRAGDKGFY 326
           R TVG       PF      G  I  +   ++L       + G + L+A           
Sbjct: 302 RLTVGAWDAEPQPF-----MGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAAL- 355

Query: 327 VQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTN 386
           + P +  +V    ++  EE FGP+ Q+IR+   +E I  ANN+ +GL+A + + D +  +
Sbjct: 356 LTPGII-DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYD 414

Query: 387 YVTQGLRAG 395
                +RAG
Sbjct: 415 RFLLEIRAG 423

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism [Energy metabolism, Amino acids and amines]. Length = 484

>gnl|CDD|237017 PRK11904, PRK11904, bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  177 bits (452), Expect = 2e-48
 Identities = 109/323 (33%), Positives = 152/323 (47%), Gaps = 44/323 (13%)

Query: 76  LRYYAGFADKIHGKTIPINGDFFAYTRHEPVG-------------VCGQIIPWNFPLLML 122
            RYYA  A ++ G    + G         P G             VC  I PWNFPL + 
Sbjct: 653 CRYYAAQARRLFGAPEKLPG---------PTGESNELRLHGRGVFVC--ISPWNFPLAIF 701

Query: 123 AWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQH 181
             ++A ALA GNT++ KPAEQTPL A     L+ EAGIP+ V+ ++PG G   GAAL   
Sbjct: 702 LGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTAD 761

Query: 182 PGVDKVAFTGSTEVGKLVQQGSGASNLKRTTL--ELGGKSPNIIFADAD------LDAAV 233
           P +  VAFTGSTE  +++ +   A +     L  E GG+  N +  D+       +D  V
Sbjct: 762 PRIAGVAFTGSTETARIINRTLAARDGPIVPLIAETGGQ--NAMIVDSTALPEQVVDDVV 819

Query: 234 EGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDK 293
             A    F + GQ C A    FVQ+ I D  +           VGDP  L+ + GP ID 
Sbjct: 820 TSA----FRSAGQRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDA 875

Query: 294 EQMDKILEFIESGKSQGAQLVAGG-GRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQ 352
           E    +   IE  K +   L         + G +V PT F    D +     E+FGP+  
Sbjct: 876 EAKANLDAHIERMKREARLLAQLPLPAGTENGHFVAPTAFE--IDSISQLEREVFGPILH 933

Query: 353 LIRFSS--IEEVIERANNSDYGL 373
           +IR+ +  +++VI+  N + YGL
Sbjct: 934 VIRYKASDLDKVIDAINATGYGL 956

Length = 1038

>gnl|CDD|240392 PTZ00381, PTZ00381, aldehyde dehydrogenase family protein; Provisional

 Score =  167 bits (425), Expect = 1e-46
 Identities = 97/283 (34%), Positives = 143/283 (50%), Gaps = 10/283 (3%)

Query: 100 YTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG 159
           Y   EP+GV   I  WN+PL +    +A A+A GNT+VLKP+E +P T+  +  L+ +  
Sbjct: 104 YIIPEPLGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY- 162

Query: 160 IPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKS 219
           +    V ++ G  +    L++ P  D + FTGS  VGKLV Q + A NL   TLELGGKS
Sbjct: 163 LDPSYVRVIEGGVEVTTELLKEP-FDHIFFTGSPRVGKLVMQAA-AENLTPCTLELGGKS 220

Query: 220 PNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGD 279
           P I+    +L  A     +G F N GQ C A     V  +I D+F+    E  K     D
Sbjct: 221 PVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFIEALKEAIKEFFGED 280

Query: 280 PFDLNVEQGPQI-DKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDD 338
           P     E   +I ++    ++ E I+    +    V  GG    +  YV PT+  N   D
Sbjct: 281 P--KKSEDYSRIVNEFHTKRLAELIKDHGGK----VVYGGEVDIENKYVAPTIIVNPDLD 334

Query: 339 MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKD 381
             + +EEIFGP+  ++ + +I+EV+E  N+    LA   F +D
Sbjct: 335 SPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGED 377

Length = 493

>gnl|CDD|177949 PLN02315, PLN02315, aldehyde dehydrogenase family 7 member

 Score =  166 bits (422), Expect = 3e-46
 Identities = 94/280 (33%), Positives = 146/280 (52%), Gaps = 6/280 (2%)

Query: 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GI 160
           P+G+ G I  +NFP  +L W    AL  GN +V K A  TPL  +A+  L+AE      +
Sbjct: 154 PLGIVGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNL 213

Query: 161 PEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSP 220
           P  +     G  + G A+ +   +  V+FTGS++VG +VQQ   A   K   LEL G + 
Sbjct: 214 PGAIFTSFCGGAEIGEAIAKDTRIPLVSFTGSSKVGLMVQQTVNARFGK-CLLELSGNNA 272

Query: 221 NIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDP 280
            I+  DAD+  AV    F      GQ C    R  + ++IYD+ + +     K+  +GDP
Sbjct: 273 IIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDVLEQLLTVYKQVKIGDP 332

Query: 281 FDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK 340
            +     GP    E      + IE  KSQG +++ GG     +G +VQPT+   +  D  
Sbjct: 333 LEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTI-VEISPDAD 391

Query: 341 IAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTK 380
           + +EE+FGPV  +++F ++EE IE  N+   GL++++FT+
Sbjct: 392 VVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTR 431

Length = 508

>gnl|CDD|236989 PRK11809, putA, trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

 Score =  168 bits (428), Expect = 2e-45
 Identities = 118/338 (34%), Positives = 170/338 (50%), Gaps = 34/338 (10%)

Query: 76   LRYYAGFADKIHGKTIPINGDFFAYTRHEPVG--VCGQIIPWNFPLLMLAWKIAPALATG 133
            LRYYAG              D F    H P+G  VC  I PWNFPL +   ++A ALA G
Sbjct: 750  LRYYAGQVR-----------DDFDNDTHRPLGPVVC--ISPWNFPLAIFTGQVAAALAAG 796

Query: 134  NTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAFTGS 192
            N+++ KPAEQTPL A     ++ EAG+P GVV ++PG G+  GAALV    V  V FTGS
Sbjct: 797  NSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMFTGS 856

Query: 193  TEVGKLVQQGSGASNLK---RTT---LELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQ 246
            TEV +L+Q+ + A  L    R      E GG++  I+ + A  +  V       F + GQ
Sbjct: 857  TEVARLLQR-NLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQ 915

Query: 247  CCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESG 306
             C A     +QD + D  +           +G+P  L+ + GP ID E    I   I++ 
Sbjct: 916  RCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAM 975

Query: 307  KSQG---AQLVAGGGRAGDKGFYVQPTVFA-NVRDDMKIAREEIFGPVQQLIRF--SSIE 360
            +++G    Q           G +V PT+   +  D++K    E+FGPV  ++R+  + ++
Sbjct: 976  RAKGRPVFQAARENSEDWQSGTFVPPTLIELDSFDELK---REVFGPVLHVVRYNRNQLD 1032

Query: 361  EVIERANNSDYGLAAAVFTKDLDKT-NYVTQGLRAGTL 397
            E+IE+ N S YGL   V T+ +D+T   VT     G L
Sbjct: 1033 ELIEQINASGYGLTLGVHTR-IDETIAQVTGSAHVGNL 1069

Length = 1318

>gnl|CDD|166060 PLN02419, PLN02419, methylmalonate-semialdehyde dehydrogenase [acylating]

 Score =  162 bits (411), Expect = 4e-44
 Identities = 110/334 (32%), Positives = 172/334 (51%), Gaps = 14/334 (4%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGVCGQI 112
           T + GK    S+  D+   L  + +  G A    G+ +P ++     Y+  EP+GVC  I
Sbjct: 198 TTEQGKTLKDSHG-DIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGVCAGI 256

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
            P+NFP ++  W    A+  GNT +LKP+E+ P  ++ +  L  EAG+P+GV+NIV G  
Sbjct: 257 CPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTN 316

Query: 173 DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAA 232
           D   A+     +  V+F GS   G  +   + A   KR    +G K+  ++  DA++DA 
Sbjct: 317 DTVNAICDDEDIRAVSFVGSNTAGMHIYARAAAKG-KRIQSNMGAKNHGLVLPDANIDAT 375

Query: 233 VEGAHFGLFFNMGQCCCAGSR-TFVQD--TIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           +       F   GQ C A S   FV D  +  D+ V R+  +A + T G   D ++  GP
Sbjct: 376 LNALLAAGFGAAGQRCMALSTVVFVGDAKSWEDKLVERA--KALKVTCGSEPDADL--GP 431

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGR----AGDKGFYVQPTVFANVRDDMKIAREE 345
            I K+  ++I   I+SG   GA+L+  G        +KG ++ PT+ + V  DM+  +EE
Sbjct: 432 VISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKEE 491

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFT 379
           IFGPV   ++ +S +E I   N + YG  AA+FT
Sbjct: 492 IFGPVLVCMQANSFDEAISIINKNKYGNGAAIFT 525

Length = 604

>gnl|CDD|143450 cd07132, ALDH_F3AB, Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

 Score =  156 bits (397), Expect = 4e-43
 Identities = 95/312 (30%), Positives = 151/312 (48%), Gaps = 40/312 (12%)

Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
            Y   EP+GV   I  WN+PL +    +  A+A GN +V+KP+E +P TA     L+AE 
Sbjct: 94  VYIYKEPLGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATA----KLLAE- 148

Query: 159 GIPEGVVNIVPGYGDAGAALVQHPGV-----------DKVAFTGSTEVGKLVQQGSGASN 207
                   ++P Y D     V   GV           D + +TGST VGK+V Q + A +
Sbjct: 149 --------LIPKYLDKECYPVVLGGVEETTELLKQRFDYIFYTGSTSVGKIVMQAA-AKH 199

Query: 208 LKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267
           L   TLELGGKSP  +    D+D A     +G F N GQ C A         + ++FV  
Sbjct: 200 LTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFVE- 258

Query: 268 SGERAKRRTVGDPFDLNVEQGPQ----IDKEQMDKILEFIESGKSQGAQLVAGGGRAGDK 323
               A ++T+ + +  + ++ P     I+     ++ + +  GK      VA GG+  +K
Sbjct: 259 ----ALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGK------VAIGGQTDEK 308

Query: 324 GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLD 383
             Y+ PTV  +V+    + +EEIFGP+  ++  ++++E IE  N+ +  LA  VF+ +  
Sbjct: 309 ERYIAPTVLTDVKPSDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKK 368

Query: 384 KTNYVTQGLRAG 395
             N +     +G
Sbjct: 369 VINKILSNTSSG 380

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes. Length = 443

>gnl|CDD|233324 TIGR01236, D1pyr5carbox1, delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

 Score =  158 bits (401), Expect = 5e-43
 Identities = 106/332 (31%), Positives = 165/332 (49%), Gaps = 19/332 (5%)

Query: 77  RYYAGFADKIHGKTIPINGD-FFAYTRHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGN 134
           R+ A +A +++ +  PI+    +  T + P+ G    I P+NF  +      APAL  GN
Sbjct: 140 RFNAKYARELYEQQ-PISAPGEWNRTEYRPLEGFVYAISPFNFTAIAGNLAGAPAL-MGN 197

Query: 135 TIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAFTGST 193
           T++ KP++   L+   V  ++ EAG+P GV+N VPG G      ++  P +  + FTGST
Sbjct: 198 TVIWKPSDTAMLSNYLVMRILEEAGLPPGVINFVPGDGPLVSDTVLADPDLAGIHFTGST 257

Query: 194 ----EVGKLVQQGSGA-SNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCC 248
                + K V Q      N  R   E GGK  +++   AD++  V G   G F   GQ C
Sbjct: 258 PTFKHLWKQVAQNLDRYHNFPRIVGETGGKDFHVVHPSADVEHVVSGTIRGAFEYQGQKC 317

Query: 249 CAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKS 308
            A SR +V  +++  F  R      R  VGDP D     G  ID++   KI+++IE  KS
Sbjct: 318 SACSRLYVPHSLWPRFKGRLLAELSRVKVGDPDDFGTFMGAVIDEKSFAKIVKYIEHAKS 377

Query: 309 QGA--QLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLI-----RFSSIEE 361
             +   ++AGG      G++V+PTV  +      + +EEIFGPV  +      ++  I +
Sbjct: 378 DPSALTILAGGKYDDSVGYFVEPTVVESKDPQEPLMKEEIFGPVLTVYVYPDDKYKEILD 437

Query: 362 VIERANNSDYGLAAAVFTKDLDKTNYVTQGLR 393
           +++  + + YGL  AVF KD D      + LR
Sbjct: 438 LVD--STTSYGLTGAVFAKDRDAILEADKVLR 467

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate [Energy metabolism, Amino acids and amines]. Length = 532

>gnl|CDD|143441 cd07123, ALDH_F4-17_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

 Score =  157 bits (399), Expect = 1e-42
 Identities = 99/296 (33%), Positives = 149/296 (50%), Gaps = 13/296 (4%)

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           + P+NF  +      APAL  GN ++ KP++   L+   V  ++ EAG+P GV+N VPG 
Sbjct: 177 VSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGD 235

Query: 172 GDA-GAALVQHPGVDKVAFTGSTEVGKLVQQ--GSGASNLK---RTTLELGGKSPNIIFA 225
           G   G  ++  P +  + FTGST   K + +  G      +   R   E GGK+ +++  
Sbjct: 236 GPVVGDTVLASPHLAGLHFTGSTPTFKSLWKQIGENLDRYRTYPRIVGETGGKNFHLVHP 295

Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
            AD+D+ V     G F   GQ C A SR +V ++++ E   R  E  K   +GDP D + 
Sbjct: 296 SADVDSLVTATVRGAFEYQGQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSN 355

Query: 286 EQGPQIDKEQMDKILEFIESGKSQ-GAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
             G  ID++  D+I  +I+  KS   A+++AGG      G++V+PTV        K+  E
Sbjct: 356 FMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTVIETTDPKHKLMTE 415

Query: 345 EIFGPVQQLIRF--SSIEEVIERANN-SDYGLAAAVFTKDLDKTNYVTQGLR--AG 395
           EIFGPV  +  +  S  EE +E  +  S Y L  A+F +D       T  LR  AG
Sbjct: 416 EIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAG 471

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences. Length = 522

>gnl|CDD|143455 cd07137, ALDH_F3FHI, Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

 Score =  129 bits (326), Expect = 3e-33
 Identities = 94/309 (30%), Positives = 143/309 (46%), Gaps = 15/309 (4%)

Query: 90  TIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTAL 149
           T P   +  +    EP+GV   I  WNFP L+    +  A+A GN +VLKP+E  P T+ 
Sbjct: 90  TFPAKAEIVS----EPLGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSA 145

Query: 150 AVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLK 209
            +  LI E    +  + ++ G      AL++    DK+ FTGS  VG+++   + A +L 
Sbjct: 146 LLAKLIPEYLDTK-AIKVIEGGVPETTALLEQKW-DKIFFTGSPRVGRIIM-AAAAKHLT 202

Query: 210 RTTLELGGKSPNIIFADADLDAAVE---GAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVA 266
             TLELGGK P I+ +  DL  AV    G  +G   N GQ C A     V+++     + 
Sbjct: 203 PVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGC--NNGQACIAPDYVLVEESFAPTLID 260

Query: 267 RSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFY 326
                 ++    +P     +   +I      + L  +    S   ++V GG R      Y
Sbjct: 261 ALKNTLEKFFGENP--KESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKN-LY 317

Query: 327 VQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTN 386
           ++PT+  +   D  I  EEIFGP+  +I    IEE IE  N+    LAA VFTK+ +   
Sbjct: 318 IEPTILLDPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKR 377

Query: 387 YVTQGLRAG 395
            +     +G
Sbjct: 378 RIVAETSSG 386

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress. Length = 432

>gnl|CDD|143446 cd07128, ALDH_MaoC-N, N-terminal domain of the monoamine oxidase C dehydratase

 Score =  118 bits (298), Expect = 6e-29
 Identities = 104/373 (27%), Positives = 148/373 (39%), Gaps = 70/373 (18%)

Query: 67  VDVEYSLRTLRYYAGFADK--------IHGKTIPI--NGDFFAYTRHEPV---GVCGQII 113
           +D++  + TL  YA    +        + G   P+  +G F    +H      GV   I 
Sbjct: 95  IDIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVG--QHILTPRRGVAVHIN 152

Query: 114 PWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI-PEGVVNIVPGYG 172
            +NFP+  +  K APAL  G  +++KPA  T     AV   I E+G+ PEG + ++   G
Sbjct: 153 AFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLI--CG 210

Query: 173 DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNII------FAD 226
             G  L      D VAFTGS               L+          PNI+       A+
Sbjct: 211 SVGDLLDHLGEQDVVAFTGSAATAA---------KLRA--------HPNIVARSIRFNAE 253

Query: 227 AD-LDAAVEGA-------HFGLFF-----NM----GQCCCAGSRTFVQDTIYDEFVARSG 269
           AD L+AA+ G         F LF       M    GQ C A  R FV +   D  +    
Sbjct: 254 ADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTAIRRAFVPEARVDAVIEALK 313

Query: 270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGG-------GRAGD 322
            R  +  VGDP    V  GP + +EQ + +   + +     A++V GG       G   +
Sbjct: 314 ARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVAT-LLAEAEVVFGGPDRFEVVGADAE 372

Query: 323 KGFYVQPTVFANVRDDMKIAR---EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFT 379
           KG +  PT+     D          E FGPV  L+ + S+ E IE A      L A+V T
Sbjct: 373 KGAFFPPTLLL-CDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVT 431

Query: 380 KDLDKTNYVTQGL 392
            D      +  G 
Sbjct: 432 NDPAFARELVLGA 444

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH. Length = 513

>gnl|CDD|165847 PLN02203, PLN02203, aldehyde dehydrogenase

 Score =  109 bits (273), Expect = 7e-26
 Identities = 83/288 (28%), Positives = 131/288 (45%), Gaps = 22/288 (7%)

Query: 104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPE- 162
           EP+GV      WNFP+ +    +  A+A GN +VLKP+E  P T+    A +A   IP+ 
Sbjct: 107 EPLGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATS----AFLAAN-IPKY 161

Query: 163 ---GVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKS 219
                V ++ G    G  L+QH   DK+ FTGS  VG+++   + A +L    LELGGK 
Sbjct: 162 LDSKAVKVIEGGPAVGEQLLQHKW-DKIFFTGSPRVGRII-MTAAAKHLTPVALELGGKC 219

Query: 220 PNI---IFADADLDAAVE---GAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAK 273
           P I   + +  D   AV    G  +G     GQ C A     V++      +       K
Sbjct: 220 PCIVDSLSSSRDTKVAVNRIVGGKWGSC--AGQACIAIDYVLVEERFAPILIELLKSTIK 277

Query: 274 RRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFA 333
           +    +P +        ++K+   ++   ++  +   +  +  GG   +K  +++PT+  
Sbjct: 278 KFFGENPRESK-SMARILNKKHFQRLSNLLKDPRVAAS--IVHGGSIDEKKLFIEPTILL 334

Query: 334 NVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKD 381
           N   D  I  EEIFGP+  +I    IE+ I   N+    LA   FT +
Sbjct: 335 NPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNN 382

Length = 484

>gnl|CDD|236931 PRK11563, PRK11563, bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

 Score =  108 bits (273), Expect = 2e-25
 Identities = 105/375 (28%), Positives = 147/375 (39%), Gaps = 74/375 (19%)

Query: 67  VDVEYSLRTLRYYAGFA------DKIH--GKTIPI--NGDFFA---YTRHEPVGVCGQII 113
           +D+E  + TL  YA         D +   G+  P+   G F      T  E V V   I 
Sbjct: 99  IDIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGRHILTPLEGVAV--HIN 156

Query: 114 PWNFPLLMLAWKIAPALATGNTIVLKPAEQT-PLTALAVGALIAEAGI-PEGVVNIVPGY 171
            +NFP+  +  K+APA   G   ++KPA  T  LT   V  LI E+G+ PEG + ++   
Sbjct: 157 AFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVV-RLIVESGLLPEGALQLI--C 213

Query: 172 GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNII-----F-A 225
           G AG  L    G D V FTGS    +          L+          PN++     F A
Sbjct: 214 GSAGDLLDHLDGQDVVTFTGSAATAQK---------LRAH--------PNVVANSVPFTA 256

Query: 226 DAD--------LDAAVEGAHFGLFFNM---------GQCCCAGSRTFVQDTIYDEFVARS 268
           +AD         DA      F LF            GQ C A  R  V   + D  +   
Sbjct: 257 EADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAIRRAIVPRALVDAVIEAL 316

Query: 269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGG-------GRAG 321
             R  +  VGDP    V  G     EQ + + E + +     A++V GG       G   
Sbjct: 317 RARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAA-LLAAAEIVFGGPDSFEVVGADA 375

Query: 322 DKGFYVQPTVFANVRDDMKIARE----EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAV 377
           +KG +  PT+     DD   A      E FGPV  L+ +  ++E IE A      L A++
Sbjct: 376 EKGAFFPPTLL--YCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASL 433

Query: 378 FTKDLDKTNYVTQGL 392
            T D +    +  G 
Sbjct: 434 VTADPEVARELVLGA 448

Length = 675

>gnl|CDD|237016 PRK11903, PRK11903, aldehyde dehydrogenase; Provisional

 Score =  107 bits (268), Expect = 4e-25
 Identities = 89/345 (25%), Positives = 144/345 (41%), Gaps = 38/345 (11%)

Query: 67  VDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTR-------HEPV---GVCGQIIPWN 116
           VD++  + TL YYA     +    +  +G+     +       H  V   GV   I  +N
Sbjct: 100 VDIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQHVLVPTRGVALFINAFN 159

Query: 117 FPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI-PEGVVNIVPGYGDAG 175
           FP   L  K APAL  G  +++KPA  T      +   +  AGI P G +++V G   + 
Sbjct: 160 FPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCG---SS 216

Query: 176 AALVQH-PGVDKVAFTGSTEVGKLVQ-QGSGASNLKRTTLELGGKSPNIIFADADLDAAV 233
           A L+ H    D V+FTGS E   +++   +      R  +E    +  ++  DA   +  
Sbjct: 217 AGLLDHLQPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEA 276

Query: 234 EGAHFGLFF---------NMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
               F LF            GQ C A  R FV + +YD        R  + TVG+P +  
Sbjct: 277 ----FDLFVKEVVREMTVKSGQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDG 332

Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG------DKGFYVQPTVF-ANVRD 337
           V  GP + + Q+  +   + + ++Q A+++  GG              V PT+  A+  D
Sbjct: 333 VRMGPLVSRAQLAAVRAGLAALRAQ-AEVLFDGGGFALVDADPAVAACVGPTLLGASDPD 391

Query: 338 DMKIARE-EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKD 381
                 + E+FGPV  L+ +      +  A      L A+V++ D
Sbjct: 392 AATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDD 436

Length = 521

>gnl|CDD|143403 cd07084, ALDH_KGSADH-like, ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

 Score =  104 bits (260), Expect = 3e-24
 Identities = 84/372 (22%), Positives = 141/372 (37%), Gaps = 39/372 (10%)

Query: 49  QSSLETLDNGKPYNMSYSVDVEYSLRTLRYYA--GFADKIH---GKTIPINGDFFAYTRH 103
            ++   L  GK +  +   ++      LR  A   ++ +I    G  +       ++   
Sbjct: 41  IAAGAVLVTGKGWMFA--ENICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYR 98

Query: 104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI-PE 162
            P G    I  +NFPL +   ++A ALA GN +++KP     +    +  L+  AG+ P 
Sbjct: 99  WPYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPP 158

Query: 163 GVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLK--RTTLELGGKSP 220
             V ++ G G    AL+ HP    V FTGS+ V + +     A + K  R  LEL G + 
Sbjct: 159 EDVTLINGDGKTMQALLLHPNPKMVLFTGSSRVAEKL-----ALDAKQARIYLELAGFNW 213

Query: 221 NIIFADAD-LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE-FVARSGERAKRRTVG 278
            ++  DA  +D         +    GQ C A S  FV +       V +      RR + 
Sbjct: 214 KVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSKTPLVEKLKALLARRKLE 273

Query: 279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA-------GDKGFYVQPTV 331
           D           +   Q    L  I   ++    ++   G+           G  V   +
Sbjct: 274 DLL---------LGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASAL 324

Query: 332 FANVRDDMKIAR---EEIFGPVQQLIRFSSIEE--VIERANNSDYGLAAAVFTKDLDKTN 386
           F  + + +K      EEIFGP   ++ +   +   V+E        L AA+++ D     
Sbjct: 325 FVPIDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQ 384

Query: 387 YVTQGL-RAGTL 397
            +   L  AG  
Sbjct: 385 ELIGNLWVAGRT 396

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway. Length = 442

>gnl|CDD|131331 TIGR02278, PaaN-DH, phenylacetic acid degradation protein paaN

 Score = 99.1 bits (247), Expect = 3e-22
 Identities = 83/333 (24%), Positives = 127/333 (38%), Gaps = 20/333 (6%)

Query: 67  VDVEYSLRTLRYYAGFADK--------IHGKTIPINGDFFAYTRH--EPV-GVCGQIIPW 115
           VD++  + TL  Y+    +           +  P++ D     RH   P  GV  QI  +
Sbjct: 95  VDIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQGRHILTPKGGVAVQINAF 154

Query: 116 NFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI-PEGVVNIVPGYGDA 174
           NFP+  L  K APA   G   + KPA  T   A A+   + E+G+ PEG + ++   G A
Sbjct: 155 NFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLI--CGSA 212

Query: 175 GAALVQHPGVDKVAFTGSTEVGKL------VQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G  L      D VAFTGS            V +     N +  +L       +    + +
Sbjct: 213 GDLLDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPE 272

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
            D   +     L    GQ C A  R  V   + +  +     R  +  +GDP +  V+ G
Sbjct: 273 FDLFAQEIVRELTIKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMG 332

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           P +  EQ   +   + +  + GA++  GG    D  F+    + A       +   E FG
Sbjct: 333 PLVSLEQRADVEAAVAALLAAGAEVRLGGPGRLDGAFFPPTLLLAEDPWAGAVHATEAFG 392

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKD 381
           PV     +    E    A      L A + T D
Sbjct: 393 PVATFFPYGDRAEAARLAARGGGSLVATLATSD 425

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has domains which are members of the pfam00171 and pfam01575 families. This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species. Length = 663

>gnl|CDD|177831 PLN02174, PLN02174, aldehyde dehydrogenase family 3 member H1

 Score = 98.2 bits (244), Expect = 4e-22
 Identities = 72/279 (25%), Positives = 136/279 (48%), Gaps = 7/279 (2%)

Query: 104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEG 163
           EP+GV   I  WN+P L+    +  A++ GN +VLKP+E  P ++  +  L+ E  +   
Sbjct: 111 EPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLL-EQYLDSS 169

Query: 164 VVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNII 223
            V +V G      AL++    DK+ +TGS+++G+++   + A +L    LELGGKSP ++
Sbjct: 170 AVRVVEGAVTETTALLEQKW-DKIFYTGSSKIGRVI-MAAAAKHLTPVVLELGGKSPVVV 227

Query: 224 FADADLDAAVEGAHFGLF-FNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFD 282
            +D DL   V     G +  N GQ C +            + +    +  +     +P +
Sbjct: 228 DSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPME 287

Query: 283 LNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA 342
            + +    ++    D++ + ++  + + +  +  GG    +   + PT+  +V  D  I 
Sbjct: 288 -SKDMSRIVNSTHFDRLSKLLD--EKEVSDKIVYGGEKDRENLKIAPTILLDVPLDSLIM 344

Query: 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKD 381
            EEIFGP+  ++  +++EE  +   +    LAA +FT +
Sbjct: 345 SEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHN 383

Length = 484

>gnl|CDD|143447 cd07129, ALDH_KGSADH, Alpha-Ketoglutaric Semialdehyde Dehydrogenase

 Score = 86.4 bits (215), Expect = 3e-18
 Identities = 82/289 (28%), Positives = 115/289 (39%), Gaps = 50/289 (17%)

Query: 105 PVGVCGQIIPWNFPLLMLAWKI-----APALATGNTIVLK--PA--EQTPLTALAVGALI 155
           PV V G     NFPL   A+ +     A ALA G  +V+K  PA    + L A A+ A +
Sbjct: 108 PVAVFG---ASNFPL---AFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAAL 161

Query: 156 AEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGK-LVQQGSGASNLKRTTL 213
              G+P GV +++ G G + G ALV+HP +  V FTGS   G+ L    +          
Sbjct: 162 RATGLPAGVFSLLQGGGREVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYA 221

Query: 214 ELGGKSPNIIFADA---DLDAAVEGAHFGLFFNMGQ-CCCAGSRTFVQDTIYDEFVARSG 269
           ELG  +P  I   A     +A  +G    L    GQ C   G          D F+A   
Sbjct: 222 ELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFCTNPGLVLVPAGPAGDAFIAALA 281

Query: 270 ERAKRRTVGDPFDLNVEQGPQIDKEQM--DKILEFIESGKSQ-----GAQLVAGGGRAGD 322
           E                   Q     M    I E    G        G +++AGG  A +
Sbjct: 282 EALA------------AAPAQT----MLTPGIAEAYRQGVEALAAAPGVRVLAGGA-AAE 324

Query: 323 KGFYVQPTVF----ANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERAN 367
            G    PT+F    A    D  + +EE+FGP   ++R+    E++  A 
Sbjct: 325 GGNQAAPTLFKVDAAAFLADPAL-QEEVFGPASLVVRYDDAAELLAVAE 372

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids. Length = 454

>gnl|CDD|143396 cd07077, ALDH-like, NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

 Score = 68.0 bits (166), Expect = 2e-12
 Identities = 60/239 (25%), Positives = 85/239 (35%), Gaps = 28/239 (11%)

Query: 63  MSYSVDVEYSLR-TLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLM 121
           M  S    Y    T R        I    +P NG+   Y R  P+GV   I+P   PL  
Sbjct: 59  MGCSESKLYKNIDTERGITASVGHIQDVLLPDNGE--TYVRAFPIGVTMHILPSTNPLSG 116

Query: 122 LAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA---GIPEGVVNIVPGYGDAGA-A 177
           +       +AT N  + +P    P T  A+  L   A     P+ +V  VP   D  A  
Sbjct: 117 IT-SALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELAEE 175

Query: 178 LVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAH 237
           L+ HP +D +  TG  +      +    S          G SP ++   AD + A    H
Sbjct: 176 LLSHPKIDLIVATGGRDAVDAAVK---HSPHIPVIGFGAGNSPVVVDETADEERASGSVH 232

Query: 238 FGLFFNMGQCCCAGSRTF-----VQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
              FF+  Q  CA  +       V D +Y+EF  +               L V Q  + 
Sbjct: 233 DSKFFD--QNACASEQNLYVVDDVLDPLYEEFKLKLVVEG----------LKVPQETKP 279

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group. Length = 397

>gnl|CDD|143444 cd07126, ALDH_F12_P5CDH, Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

 Score = 54.4 bits (131), Expect = 5e-08
 Identities = 75/333 (22%), Positives = 124/333 (37%), Gaps = 67/333 (20%)

Query: 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGV 164
           P G    I P+NFPL + A ++  AL  GN  +LK   +  +       L+   G+P   
Sbjct: 142 PYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATD 201

Query: 165 VNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           V+++   G     ++         FTGS++V             +R  LEL GK   +  
Sbjct: 202 VDLIHSDGPTMNKILLEANPRMTLFTGSSKVA------------ERLALELHGK---VKL 246

Query: 225 ADADLDAAVEGAHFG------------LFFNMGQCCCAGSRTFVQDTIYDE-FVARSGER 271
            DA  D  + G                 +   GQ C A S  F  +       + +    
Sbjct: 247 EDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKCSAQSILFAHENWVQAGILDKLKAL 306

Query: 272 AKRRTVGDPFDLNVEQGP------QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGF 325
           A++R +    DL +  GP      +   + +DK+L         GA+++ GG    +   
Sbjct: 307 AEQRKLE---DLTI--GPVLTWTTERILDHVDKLLAI------PGAKVLFGGKPLTNHSI 355

Query: 326 -----YVQPT-VF-----ANVRDDMKIAREEIFGPVQQLIRFSSIEE--VIERANNSDYG 372
                  +PT VF       + ++ ++   E+FGP Q +  +   +   V+E        
Sbjct: 356 PSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAH 415

Query: 373 LAAAVFTKDLDKTNYVT---------QGLRAGT 396
           L AAV + D+     V           G+RA T
Sbjct: 416 LTAAVVSNDIRFLQEVLANTVNGTTYAGIRART 448

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences. Length = 489

>gnl|CDD|143400 cd07081, ALDH_F20_ACDH_EutE-like, Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

 Score = 52.3 bits (125), Expect = 3e-07
 Identities = 61/335 (18%), Positives = 116/335 (34%), Gaps = 41/335 (12%)

Query: 79  YAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVL 138
           Y  + D+     +  + +       EP+GV   I P   P   + +K   +L T N+I+ 
Sbjct: 69  YNVYKDEKTCGVLTGDENGGTLIIAEPIGVVASITPSTNPTSTVIFKSLISLKTRNSIIF 128

Query: 139 KP----AEQTPLTALAVGALIAEAGIPEGVVNIV--PGYGDAGAALVQHPGVDKVAFTGS 192
            P     + T   A  +      AG PE ++  +  P   +    L++ PG+  +  TG 
Sbjct: 129 SPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSI-ELAQRLMKFPGIGLLLATGG 187

Query: 193 TEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGS 252
             V K     +  S+ K       G +P +I   AD+  AV+       F+ G  C +  
Sbjct: 188 PAVVK-----AAYSSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQ 242

Query: 253 RTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQ 312
              V D++YDE +     +                  ++  E++ ++   I         
Sbjct: 243 SVIVVDSVYDEVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRD 287

Query: 313 LVA--GGGRAGDKGFYVQPT-----VFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIER 365
           +V       A   G  V               + +    E   PV  + R ++  +   +
Sbjct: 288 IVGQDAYKIAAAAGLKVPQETRILIGEVTSLAEHEPFAHEKLSPVLAMYRAANFADADAK 347

Query: 366 A----NNSDYGLAAAVFT---KDLDKTNYVTQGLR 393
           A         G  +A+++   K ++  N     ++
Sbjct: 348 ALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMK 382

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway. Length = 439

>gnl|CDD|143440 cd07122, ALDH_F20_ACDH, Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

 Score = 49.0 bits (118), Expect = 3e-06
 Identities = 82/324 (25%), Positives = 121/324 (37%), Gaps = 61/324 (18%)

Query: 104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKP---AEQTPLTALAVGALIA---E 157
           EPVGV   +IP   P     +K   AL T N I+  P   A++   +  A   +      
Sbjct: 94  EPVGVIAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKC--SIEAAKIMREAAVA 151

Query: 158 AGIPEGVVNIVPGYGDAGA-ALVQHPGVDKVAFTGSTEVGKLVQQ------GSGASNLKR 210
           AG PEG++  +          L++HP VD +  TG   + K          G G  N   
Sbjct: 152 AGAPEGLIQWIEEPSIELTQELMKHPDVDLILATGGPGMVKAAYSSGKPAIGVGPGN--- 208

Query: 211 TTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGE 270
                    P  I   AD+  AV+       F+ G  C +     V D IYDE  A    
Sbjct: 209 --------VPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDEVRA---- 256

Query: 271 RAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGK------SQGAQLVAGGGRAGDKG 324
             KRR  G  F LN E+     KE+++K L F + G        + AQ +A    AG + 
Sbjct: 257 ELKRR--GAYF-LNEEE-----KEKLEKAL-FDDGGTLNPDIVGKSAQKIA--ELAGIE- 304

Query: 325 FYVQPTV------FANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERA----NNSDYGLA 374
             V             V  +  ++RE++  PV    R    EE +E+A         G  
Sbjct: 305 --VPEDTKVLVAEETGVGPEEPLSREKLS-PVLAFYRAEDFEEALEKARELLEYGGAGHT 361

Query: 375 AAVFTKDLDKTNYVTQGLRAGTLI 398
           A + + D +        +    ++
Sbjct: 362 AVIHSNDEEVIEEFALRMPVSRIL 385

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway. Length = 436

>gnl|CDD|143439 cd07121, ALDH_EutE, Ethanolamine utilization protein EutE-like

 Score = 47.6 bits (114), Expect = 7e-06
 Identities = 69/312 (22%), Positives = 111/312 (35%), Gaps = 65/312 (20%)

Query: 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKP---AEQTPLTALAVGAL---IAEA 158
           P GV G I P   P   +       LA GN +V  P   A++   +A AV  +   IAEA
Sbjct: 97  PFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKV--SAYAVELINKAIAEA 154

Query: 159 GIPEGVVNIV--PGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQ------GSGASNLKR 210
           G P+ +V  V  P   +    L+ HP ++ +  TG   V K          G+GA N   
Sbjct: 155 GGPDNLVVTVEEPTI-ETTNELMAHPDINLLVVTGGPAVVKAALSSGKKAIGAGAGN--- 210

Query: 211 TTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGE 270
                    P ++   AD++ A      G  F+    C A       D++ D  +A    
Sbjct: 211 --------PPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVDSVADYLIAAMQR 262

Query: 271 RAKRRTVGDPFDLNVEQGPQIDKEQMDKILE--------------FIESGKSQGAQLVAG 316
                               ++ EQ +++LE              ++  GK     L A 
Sbjct: 263 ---------------NGAYVLNDEQAEQLLEVVLLTNKGATPNKKWV--GKDASKILKAA 305

Query: 317 GGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGL--A 374
           G             +      D     EE   P+  ++R  + +E IE A   ++G    
Sbjct: 306 GIEVPAD----IRLIIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHT 361

Query: 375 AAVFTKDLDKTN 386
           A + +K+++   
Sbjct: 362 AIIHSKNVENLT 373

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source. Length = 429

>gnl|CDD|131341 TIGR02288, PaaN_2, phenylacetic acid degradation protein paaN

 Score = 47.6 bits (113), Expect = 8e-06
 Identities = 64/239 (26%), Positives = 90/239 (37%), Gaps = 43/239 (17%)

Query: 69  VEYSLRTLRYYAGFA--DKIHGKTIPINGDFFAYTRHEPVG-------VCGQIIPWN-FP 118
           V Y+ R +      A  +K  GK  P+        R   V         C     WN +P
Sbjct: 157 VAYAYREMSRIPETAVWEKPQGKNDPLKLK----KRFTIVPRGIALVIGCSTFPTWNTYP 212

Query: 119 LLMLAWKIAPALATGNTIVLKPAEQTPL-TALAVGA---LIAEAGIPEGVVNIV--PGYG 172
            L        +LATGN +++KP     L  AL V     ++ EAG    +V +       
Sbjct: 213 GLF------ASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGH 266

Query: 173 DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTL--ELGGKSPNIIFADADLD 230
           +A   L   P V  + FTGS   G+ ++Q     N ++  +  E  G +  II +  D  
Sbjct: 267 EAAQRLATDPAVRIIDFTGSNAFGQWLEQ-----NARQAQVYTEKAGVNTVIIESTDDYK 321

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFV-QDTI--------YDEFVARSGERAKRRTVGDP 280
           A +    F L    GQ C       V +D I        YDE VA     A    +GDP
Sbjct: 322 AMLRNLAFSLSLYSGQMCTTTQAILVPRDGIRTDQGRKSYDE-VAADLATAIDGLLGDP 379

This enzyme is proposed to act in the ring-opening step of phenylacetic acid degradation which follows ligation of the acid with coenzyme A (by PaaF) and hydroxylation by a multicomponent non-heme iron hydroxylase complex (PaaGHIJK). Gene symbols have been standardized in. This enzyme is related to aldehyde dehydrogenases and has a domain which is a member of the pfam00171 family. This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278. Length = 551

>gnl|CDD|143445 cd07127, ALDH_PAD-PaaZ, Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

 Score = 47.1 bits (112), Expect = 1e-05
 Identities = 67/280 (23%), Positives = 99/280 (35%), Gaps = 33/280 (11%)

Query: 109 CGQIIPWN-FPLLMLAWKIAPALATGNTIVLKPAEQTPL-TALAVG---ALIAEAGIPEG 163
           C     WN +P L        +LATGN +++KP     L  A+ V     ++AEAG    
Sbjct: 202 CSTFPTWNGYPGLF------ASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPN 255

Query: 164 VVNIV--PGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPN 221
           +V +            L   P V  + FTGS   G  ++  +  + +     E  G +  
Sbjct: 256 LVTLAADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANARQAQV---YTEKAGVNTV 312

Query: 222 IIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFV-QDTI--------YDEFVARSGERA 272
           ++ +  DL A +    F L    GQ C      +V +D I        +DE  A     A
Sbjct: 313 VVDSTDDLKAMLRNLAFSLSLYSGQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLA-AA 371

Query: 273 KRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG---DKGFYVQP 329
               + DP       G      Q    L  I   +  G  L+A    A           P
Sbjct: 372 IDGLLADPARAAALLGAI----QSPDTLARIAEARQLGEVLLASEAVAHPEFPDARVRTP 427

Query: 330 TVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNS 369
            +      D     EE FGP+  ++   S +  IE A  S
Sbjct: 428 LLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARES 467

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes. Length = 549

>gnl|CDD|215259 PLN02466, PLN02466, aldehyde dehydrogenase family 2 member

 Score = 42.9 bits (101), Expect = 2e-04
 Identities = 23/58 (39%), Positives = 34/58 (58%), Gaps = 5/58 (8%)

Query: 4  LRNLALKSSTLGSLKNYS--AAAVPKPITKP-KIEHTQLFINNEFVNAQS--SLETLD 56
          LR+          ++ +S  AAAV +PIT P ++ +TQL IN +FV+A S  +  TLD
Sbjct: 22 LRSRGRNGGRGRGIRRFSTAAAAVEEPITPPVQVSYTQLLINGQFVDAASGKTFPTLD 79

Length = 538

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	442
KOG2450|consensus	501		100.0
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	100.0
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	100.0
KOG2451|consensus	503		100.0
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	100.0
PRK10090	409	aldehyde dehydrogenase A; Provisional	100.0
PLN02766	501	coniferyl-aldehyde dehydrogenase	100.0
PLN02278	498	succinic semialdehyde dehydrogenase	100.0
PLN02174	484	aldehyde dehydrogenase family 3 member H1	100.0
PLN02466	538	aldehyde dehydrogenase family 2 member	100.0
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	100.0
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	100.0
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	100.0
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	100.0
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	100.0
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	100.0
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	100.0
PLN02315	508	aldehyde dehydrogenase family 7 member	100.0
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	100.0
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	100.0
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	100.0
PLN02467	503	betaine aldehyde dehydrogenase	100.0
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	100.0
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	100.0
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	100.0
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	100.0
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	100.0
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	100.0
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	100.0
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	100.0
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	100.0
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	100.0
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	100.0
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	100.0
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	100.0
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	100.0
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	100.0
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	100.0
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	100.0
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	100.0
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	100.0
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	100.0
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	100.0
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	100.0
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	100.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	100.0
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	100.0
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	100.0
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	100.0
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	100.0
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	100.0
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	100.0
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	100.0
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	100.0
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	100.0
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	100.0
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	100.0
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	100.0
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	100.0
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	100.0
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	100.0
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	100.0
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	100.0
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	100.0
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	100.0
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	100.0
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	100.0
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	100.0
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	100.0
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	100.0
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	100.0
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	100.0
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	100.0
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	100.0
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	100.0
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	100.0
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	100.0
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	100.0
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	100.0
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	100.0
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	100.0
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	100.0
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	100.0
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	100.0
PLN02203	484	aldehyde dehydrogenase	100.0
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	100.0
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	100.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	100.0
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	100.0
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	100.0
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	100.0
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	100.0
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	100.0
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	100.0
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	100.0
PRK11903	521	aldehyde dehydrogenase; Provisional	100.0
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	100.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	100.0
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	100.0
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	100.0
PRK11809	1318	putA trifunctional transcriptional regulator/proli	100.0
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	100.0
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	100.0
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	100.0
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	100.0
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	100.0
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	100.0
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	100.0
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	100.0
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	100.0
KOG2456|consensus	477		100.0
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	100.0
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	100.0
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	100.0
KOG2454|consensus	583		100.0
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	100.0
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	100.0
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	100.0
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	100.0
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	100.0
KOG2455|consensus	561		100.0
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	100.0
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	100.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	100.0
KOG2453|consensus	507		100.0
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	100.0
KOG2452|consensus	881		100.0
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	100.0
cd07080	422	ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC. Ac	99.98
COG0014	417	ProA Gamma-glutamyl phosphate reductase [Amino aci	99.95
KOG4165|consensus	433		99.82
PF05893	399	LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR0086	99.66
KOG2450|consensus	501		99.37
KOG2451|consensus	503		99.26
COG1012	472	PutA NAD-dependent aldehyde dehydrogenases [Energy	99.21
PRK11241	482	gabD succinate-semialdehyde dehydrogenase I; Provi	99.19
PLN02174	484	aldehyde dehydrogenase family 3 member H1	99.16
PLN02766	501	coniferyl-aldehyde dehydrogenase	99.12
TIGR01780	448	SSADH succinate-semialdehyde dehydrogenase. SSADH	99.12
TIGR03374	472	ABALDH 1-pyrroline dehydrogenase. Members of this	99.1
cd07140	486	ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydroge	99.09
PLN02278	498	succinic semialdehyde dehydrogenase	99.08
PLN02203	484	aldehyde dehydrogenase	99.08
PLN02466	538	aldehyde dehydrogenase family 2 member	99.08
PLN02419	604	methylmalonate-semialdehyde dehydrogenase [acylati	99.08
PRK10090	409	aldehyde dehydrogenase A; Provisional	99.05
TIGR03250	472	PhnAcAld_DH putative phosphonoacetaldehyde dehydro	99.05
cd07559	480	ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dep	99.04
cd07113	477	ALDH_PADH_NahF Escherichia coli NAD+-dependent phe	99.03
TIGR03216	481	OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehy	99.03
cd07085	478	ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrog	99.02
PRK13473	475	gamma-aminobutyraldehyde dehydrogenase; Provisiona	99.02
cd07141	481	ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydro	99.02
cd07128	513	ALDH_MaoC-N N-terminal domain of the monoamine oxi	99.01
cd07136	449	ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydr	99.01
cd07137	432	ALDH_F3FHI Plant aldehyde dehydrogenase family 3 m	99.01
cd07107	456	ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde	99.0
TIGR02278	663	PaaN-DH phenylacetic acid degradation protein paaN	99.0
PRK11563	675	bifunctional aldehyde dehydrogenase/enoyl-CoA hydr	99.0
cd07152	443	ALDH_BenzADH NAD-dependent benzaldehyde dehydrogen	98.99
cd07094	453	ALDH_F21_LactADH-like ALDH subfamily: NAD+-depende	98.99
cd07142	476	ALDH_F2BC Arabidosis aldehyde dehydrogenase family	98.99
PRK09406	457	gabD1 succinic semialdehyde dehydrogenase; Reviewe	98.99
PRK13968	462	putative succinate semialdehyde dehydrogenase; Pro	98.99
cd07106	446	ALDH_AldA-AAD23400 Streptomyces aureofaciens putat	98.99
cd07151	465	ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyd	98.98
TIGR02299	488	HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyd	98.98
cd07101	454	ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succi	98.98
cd07132	443	ALDH_F3AB Aldehyde dehydrogenase family 3 members	98.97
cd07148	455	ALDH_RL0313 Uncharacterized ALDH ( RL0313) with si	98.96
PLN00412	496	NADP-dependent glyceraldehyde-3-phosphate dehydrog	98.96
cd07133	434	ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-l	98.96
cd07123	522	ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate	98.96
PRK13252	488	betaine aldehyde dehydrogenase; Provisional	98.95
cd07108	457	ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent a	98.95
cd07116	479	ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependen	98.95
cd07130	474	ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic se	98.95
cd07095	431	ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde	98.95
cd07111	480	ALDH_F16 Aldehyde dehydrogenase family 16A1-like.	98.95
cd07117	475	ALDH_StaphAldA1 Uncharacterized Staphylococcus aur	98.95
PRK09457	487	astD succinylglutamic semialdehyde dehydrogenase;	98.95
cd07090	457	ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobuty	98.94
PLN02467	503	betaine aldehyde dehydrogenase	98.94
PLN02315	508	aldehyde dehydrogenase family 7 member	98.94
PRK11903	521	aldehyde dehydrogenase; Provisional	98.94
PRK09407	524	gabD2 succinic semialdehyde dehydrogenase; Reviewe	98.94
cd07146	451	ALDH_PhpJ Streptomyces putative phosphonoformaldeh	98.94
PTZ00381	493	aldehyde dehydrogenase family protein; Provisional	98.93
TIGR01236	533	D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehy	98.93
PRK09847	494	gamma-glutamyl-gamma-aminobutyraldehyde dehydrogen	98.93
cd07120	455	ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde deh	98.93
cd07097	473	ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent	98.93
TIGR01237	511	D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehy	98.93
cd07099	453	ALDH_DDALDH Methylomonas sp. 4,4'-diapolycopene-di	98.93
TIGR01804	467	BADH glycine betaine aldehyde dehydrogenase. Betai	98.93
cd07086	478	ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadip	98.92
cd07143	481	ALDH_AldA_AN0554 Aspergillus nidulans aldehyde deh	98.92
cd07135	436	ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde	98.92
cd07147	452	ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1	98.92
TIGR03240	484	arg_catab_astD succinylglutamic semialdehyde dehyd	98.91
cd07138	466	ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric ac	98.91
cd07131	478	ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuen	98.91
cd07100	429	ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succi	98.91
cd07124	512	ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxyl	98.91
cd07105	432	ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-l	98.91
cd07118	454	ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydr	98.91
cd07150	451	ALDH_VaniDH_like Pseudomonas putida vanillin dehyd	98.91
cd07089	459	ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric	98.91
cd07088	468	ALDH_LactADH-AldA Escherichia coli lactaldehyde de	98.9
PRK03137	514	1-pyrroline-5-carboxylate dehydrogenase; Provision	98.9
cd07102	452	ALDH_EDX86601 Uncharacterized aldehyde dehydrogena	98.89
cd07144	484	ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyd	98.89
cd07091	476	ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families	98.89
cd07110	456	ALDH_F10_BADH Arabidopsis betaine aldehyde dehydro	98.89
cd07092	450	ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent g	98.88
cd07119	482	ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent be	98.88
cd07083	500	ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-	98.88
cd07126	489	ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate de	98.87
cd07139	471	ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehy	98.87
cd07134	433	ALDH_AlkH-like Pseudomonas putida Aldehyde dehydro	98.86
cd07104	431	ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependen	98.85
cd07115	453	ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxy	98.85
cd07114	457	ALDH_DhaS Uncharacterized Candidatus pelagibacter	98.85
cd07125	518	ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate d	98.85
cd07081	439	ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldeh	98.85
KOG2449|consensus	157		98.84
cd07145	456	ALDH_LactADH_F420-Bios Methanocaldococcus jannasch	98.84
TIGR01722	477	MMSDH methylmalonic acid semialdehyde dehydrogenas	98.83
cd07098	465	ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and	98.82
cd07112	462	ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent	98.81
KOG2454|consensus	583		98.81
cd07087	426	ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl	98.8
cd07109	454	ALDH_AAS00426 Uncharacterized Saccharopolyspora sp	98.8
cd07084	442	ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent	98.8
cd07121	429	ALDH_EutE Ethanolamine utilization protein EutE-li	98.8
cd07149	453	ALDH_y4uC Uncharacterized ALDH (y4uC) with similar	98.79
PRK15398	465	aldehyde dehydrogenase EutE; Provisional	98.78
cd07103	451	ALDH_F5_SSADH_GabD Mitochondrial succinate-semiald	98.77
PF00171	462	Aldedh: Aldehyde dehydrogenase family; InterPro: I	98.76
TIGR01238	500	D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehy	98.76
cd07093	455	ALDH_F8_HMSADH Human aldehyde dehydrogenase family	98.74
PF07368	215	DUF1487: Protein of unknown function (DUF1487); In	98.74
cd07082	473	ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylat	98.73
cd07129	454	ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydr	98.7
PRK11905	1208	bifunctional proline dehydrogenase/pyrroline-5-car	98.68
cd07122	436	ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydr	98.65
PRK11904	1038	bifunctional proline dehydrogenase/pyrroline-5-car	98.64
PRK11809	1318	putA trifunctional transcriptional regulator/proli	98.56
PLN02418	718	delta-1-pyrroline-5-carboxylate synthase	98.54
PRK00197	417	proA gamma-glutamyl phosphate reductase; Provision	98.51
TIGR00407	398	proA gamma-glutamyl phosphate reductase. The prosi	98.51
KOG2452|consensus	881		98.47
TIGR02288	551	PaaN_2 phenylacetic acid degradation protein paaN.	98.45
cd07079	406	ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate redu	98.42
TIGR02518	488	EutH_ACDH acetaldehyde dehydrogenase (acetylating)	98.33
TIGR01092	715	P5CS delta l-pyrroline-5-carboxylate synthetase. T	98.29
cd07078	432	ALDH NAD(P)+ dependent aldehyde dehydrogenase fami	98.25
cd07127	549	ALDH_PAD-PaaZ Phenylacetic acid degradation protei	98.1
KOG2456|consensus	477		98.02
PRK13805	862	bifunctional acetaldehyde-CoA/alcohol dehydrogenas	98.0
cd07077	397	ALDH-like NAD(P)+-dependent aldehyde dehydrogenase	97.93
cd06534	367	ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase s	97.75
COG4230	769	Delta 1-pyrroline-5-carboxylate dehydrogenase [Ene	97.37
KOG2455|consensus	561		96.86
KOG2453|consensus	507		96.2
PF00815	412	Histidinol_dh: Histidinol dehydrogenase; InterPro:	95.34
KOG2449|consensus	157		93.54

>KOG2450|consensus

Probab=100.00  E-value=1e-79  Score=599.12  Aligned_cols=376  Identities=62%  Similarity=0.996  Sum_probs=358.3

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccce
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  108 (442)
                      ..+..+++....+..+.++.++.+++.+.|||+.+++..|+..+++.++|++.|++.+.+..++...+...+++++|+||
T Consensus        82 ~~R~~~L~~~Adlie~~~~~lA~~E~~d~GKp~~~a~~~Dl~~~~~~~ry~ag~ad~~~~~~~~~~~~~~~yt~~eP~GV  161 (501)
T KOG2450|consen   82 AERGRLLRKLADLIEQDADVLAALEVLDNGKPYPEALVSDLPPAIDCFRYYAGWADKIHGSTIPTDGEFFAYTRREPIGV  161 (501)
T ss_pred             HHHHHHHHHHHHHHHhhhHHHhhhcccccCCcchhhhhcCchhhhhHHHhhccchhhcccccCCCCCceEEEecCCccee
Confidence            34556666666677777888899999999999999994499999999999999998887766666567789999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      ++.|.|||||+....|+++|||++||+||+||++++|+|+..+++++.++|+|+|++|+++|.+ +++.+|.+||+|+.|
T Consensus       162 ~G~I~pWN~Pllm~awKlaPALa~GNtvV~Kpae~tplsal~~~~l~~eaG~P~GVvNii~G~G~~aG~al~sH~dv~ki  241 (501)
T KOG2450|consen  162 CGQIIPWNFPLLMQAWKLAPALAAGNTVVLKPAEQTPLTALYLASLCKEAGFPPGVVNIVPGSGTTAGAALASHPDVDKV  241 (501)
T ss_pred             eeEeccCchHHHHHHHhhhhHHhhCcEEEecCCCCCCchHHHHHHHhHHhcCCcceEEEccCCCchHHHHHhhCCCCceE
Confidence            9999999999999999999999999999999999999999999999999999999999999988 999999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++..++||+.+|+|||+|.||++|||++.|++.++.+.|+|+||.|++.+|+|||+++||+|+++
T Consensus       242 aFTGSt~~G~~I~~aaa~~n~K~vtLElGGKsp~Ivf~Dadld~av~~~~~~iF~nqGq~C~a~sR~~Vqe~iydefv~~  321 (501)
T KOG2450|consen  242 AFTGSTPVGKEIMEAAAESNLKPVTLELGGKSPIIVFDDADLDLAVENAAFGIFFNQGQCCTAGSRVFVQESIYDEFVEK  321 (501)
T ss_pred             EecCCCcchhHHhhhhhhcCCceeccccCCCCcceEecccchHHHHHHHHHHhhcccccccccCceeEEechHHHHHHHH
Confidence            99999999999999998777999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhh-cccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKR-RTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~-~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      ++++..+ +++|||+++.+.+||.+++.+++++.+||+.++.+|+++++||.+.++.|+||.|||+.++..+|+++.||+
T Consensus       322 ~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG~~~g~~Gyfi~Ptv~~~v~~~m~i~~EEI  401 (501)
T KOG2450|consen  322 FVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGGVRLGDKGYFIKPTVFTNVTDDMRIAKEEI  401 (501)
T ss_pred             HHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecCcccCCCceEECCeeccCCChhhhhhHhhc
Confidence            9999966 999999999999999999999999999999999999999999988778999999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |||++.+.+|++.||+|+++|++.|||+++|||+|.+++.+++.++++|+||+|+...
T Consensus       402 FGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGtVwiN~y~~  459 (501)
T KOG2450|consen  402 FGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGTVWINCYNV  459 (501)
T ss_pred             cCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCceEEEecccc
Confidence            9999999999999999999999999999999999999999999999999999999864

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=100.00  E-value=4e-77  Score=606.68  Aligned_cols=370  Identities=49%  Similarity=0.807  Sum_probs=347.4

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccce
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  108 (442)
                      ..+.++++.......+.++.+++++++|+|||+.+++. |+..+++.++|++..+++..+...+.+.+...+++++|+||
T Consensus        58 ~eR~~iL~~~a~~l~~~~~ela~~~~~e~Gk~i~ea~~-ei~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GV  136 (472)
T COG1012          58 EERAAILRRIADLLEARAEELAALITLETGKPISEARG-EIARAADFIRYYAEEARRLEGETIPTDKGSKALVRREPLGV  136 (472)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccCCCCCcceEEEeecceE
Confidence            35566666666666666788899999999999999999 89999999999999998777665333346778999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ +.++.|+.||+++.|
T Consensus       137 v~~I~PwNfP~~~~~~k~apALaaGntVV~KPse~tp~sa~~l~~~~~~aglP~Gv~nvv~g~~~~~g~~l~~~p~v~~i  216 (472)
T COG1012         137 VGAITPWNFPLALAAWKLAPALAAGNTVVLKPSEQTPLSALALAELAAEAGLPAGVLNVVTGGGAEVGDALVAHPDVDAI  216 (472)
T ss_pred             EEEECCCCCHHHHHHhhHHHHHHcCCEEEEECcccCcHHHHHHHHHHHHhCCCCCeEEEEeCCCchHHHHHhcCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999977 799999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ +++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++||+|+++
T Consensus       217 ~FTGSt~~G~~i~~~Aa-~~~k~~~lELGGk~p~IV~~dAdl~~Av~~~~~g~f~n~GQ~C~a~~R~~V~~~v~d~f~~~  295 (472)
T COG1012         217 SFTGSTAVGRAIAAAAA-ANLKPVTLELGGKSPAIVLEDADLDAAVDAAVFGAFFNAGQRCTAASRLIVHESVYDEFVER  295 (472)
T ss_pred             EEECChHHHHHHHHHHh-hcCCcEEEECCCCCCeEECCCCCHHHHHHHHHHHHHhCCCCCccCCeEEEEehhhHHHHHHH
Confidence            99999999999999998 69999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhh-cccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKR-RTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~-~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |.++ ++ +++|||.|+.+++||+++..+++++.++|++++.+|+.++.||+. .. |+|++|||++++.++|++++||+
T Consensus       296 l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~-~~-g~~~~PTv~~~v~~~~~i~~eEi  372 (472)
T COG1012         296 LVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKR-PG-GYFVEPTILEGVTPDMRIAREEI  372 (472)
T ss_pred             HHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcC-CC-CeEECCEEEecCCCCChhhhccc
Confidence            9999 65 899999999999999999999999999999999999999999883 33 89999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||||+++++|+++||+|+++|+++|||+++|||+|..+..++++++++|+|+||+..
T Consensus       373 FGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~iN~~~  429 (472)
T COG1012         373 FGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVGINDYT  429 (472)
T ss_pred             cCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEEECCCC
Confidence            999999999999999999999999999999999999999999999999999999874

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=100.00  E-value=9.2e-77  Score=608.65  Aligned_cols=373  Identities=38%  Similarity=0.642  Sum_probs=346.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .|.+++.+......+.++.+++++++|+|||+.+++. |+..+++.++|++.++++..++..+.. .+...+++++|+||
T Consensus        71 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  149 (482)
T PRK11241         71 ERANILRRWFNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGV  149 (482)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeeceE
Confidence            4455555555555566788899999999999999998 999999999999988876655443321 34456889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++|++ +.++.|+.||+++.|
T Consensus       150 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gvv~vv~g~~~~~~~~l~~~~~v~~v  229 (482)
T PRK11241        150 TAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGIPAGVFNVVTGSAGAVGGELTSNPLVRKL  229 (482)
T ss_pred             EEEECCCcChHHHHHHHHHHHHHhCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCCchhHHHHhcCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999976 788999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      +||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++||+|+++
T Consensus       230 ~FTGS~~~G~~i~~~aa-~~l~~~~lElGGknp~IV~~dADld~aa~~i~~~~f~~aGQ~C~a~~ri~V~~~i~d~f~~~  308 (482)
T PRK11241        230 SFTGSTEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK  308 (482)
T ss_pred             EEECcHHHHHHHHHHHH-hcCCcEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEeHHHHHHHHHH
Confidence            99999999999999988 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      |.++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||...+.+|+|+.|||+.+++++|.++++|+|
T Consensus       309 l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~g~f~~Ptvl~~v~~~~~i~~eE~F  388 (482)
T PRK11241        309 LQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELGGNFFQPTILVDVPANAKVAKEETF  388 (482)
T ss_pred             HHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCCCeEEeeEEEECCCCCChhhhCcCc
Confidence            99999999999999999999999999999999999999999999999999764446899999999999999999999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |||+++.+|++++|+|+++|+++|||+++|||+|.+++.++++++++|.|+||+...
T Consensus       389 GPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~~  445 (482)
T PRK11241        389 GPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII  445 (482)
T ss_pred             CCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999998653

>KOG2451|consensus

Probab=100.00  E-value=3e-77  Score=556.96  Aligned_cols=393  Identities=37%  Similarity=0.616  Sum_probs=359.9

Q ss_pred             CCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccceE
Q psy5844          31 KPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGVC  109 (442)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv  109 (442)
                      +.++++.--.+.-+..+.+++++++|.|||+.|+.+ ||..+..+++||+..+.+++|+..+.. +.....+.++|+||+
T Consensus        85 Rs~lLrkwy~Li~en~ddLa~iiTlE~GKpL~eA~g-Ev~y~a~f~eWyAeEA~RvyGdii~s~~~~rr~i~ikQPvGV~  163 (503)
T KOG2451|consen   85 RSALLRKWYELIMENKDDLATIITLENGKPLGEAKG-EVAYSAAFFEWYAEEARRVYGDIIPSLNPNRRLIVIKQPVGVV  163 (503)
T ss_pred             HHHHHHHHHHHHHhchHHHHHHHhhhcCCchhhccc-eeehhHHHHHHHHHHhhhhhccccCCCCCCceEEEEeccceeE
Confidence            444444432333333455599999999999999999 999999999999999999999977654 677789999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCC---c-cchhhhhcCCCcc
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY---G-DAGAALVQHPGVD  185 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~---~-~~~~~l~~~~~v~  185 (442)
                      ++|+|||||......+..+||++||+||+||++.+|++++.++++..++|+|+|++|+++++   . +++..|+.+|.|+
T Consensus       164 alItPWNFP~AMItRK~gAALAaGCTvVvkPs~~TPlsaLala~lA~~AGiP~Gv~NVit~~~~~a~eig~~lctsp~Vr  243 (503)
T KOG2451|consen  164 ALITPWNFPAAMITRKAGAALAAGCTVVVKPSEDTPLSALALAKLAEEAGIPAGVLNVITADASNAAEIGKELCTSPDVR  243 (503)
T ss_pred             EEecCcCChHHHHHhHHHHHHhcCceEEEccCCCCchHHHHHHHHHHHcCCCCcceEEEecCCCChHHHHHHhhcCCcee
Confidence            99999999999999999999999999999999999999999999999999999999999974   3 7999999999999


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|+||||+.+|+.++.+.+ .+.|++.+||||+.|+||++|||+|+|++.....+|.|+||.|.+..|+|||+++||+|+
T Consensus       244 kisFTGST~VGKiL~~qsa-stvKkvslELGGNAPfIVFddadld~Av~g~mA~KFr~~GQtCVcaNR~yVh~~iyD~Fv  322 (503)
T KOG2451|consen  244 KISFTGSTNVGKILMAQSA-STVKKVSLELGGNAPFIVFDDADLDQAVEGAMACKFRNSGQTCVCANRVYVHDSIYDKFV  322 (503)
T ss_pred             eEEeeccchHHHHHHHhhh-hhhhheehhhcCCCceEEecCcCHHHHHHHHHHhhhccCCceeEecceeEEehhhHHHHH
Confidence            9999999999999999988 799999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc-CCCCcccccceeccCcchhHHHHH
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA-GDKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-~~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      ..|.++++++++||.+|++++.||||+..+.+++..++++|+++|+++++||+.. +.+..|.+||++.+++.+|.+..|
T Consensus       323 ~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~fyePTvl~~V~~~m~~s~e  402 (503)
T KOG2451|consen  323 SKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTFYEPTVLSNVTQNMLVSSE  402 (503)
T ss_pred             HHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCccccceEeecCCccceeecc
Confidence            9999999999999999999999999999999999999999999999999999954 445599999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH----HHhhccCCccceeE
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV----IERANNSDYGLAAA  420 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a----v~~an~~~yGl~~~  420 (442)
                      |+|||+.++.+|++.||+|+++|++..||+.++||+|.++..+++++++.|+|-+|......    ......+++|-.++
T Consensus       403 EtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVGvNeglis~~~~pFGGVKeSG~GREgs  482 (503)
T KOG2451|consen  403 ETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVGVNEGLISDAEAPFGGVKESGFGREGS  482 (503)
T ss_pred             ccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceeecccceecccccCcCCccccccCcccc
Confidence            99999999999999999999999999999999999999999999999999999999865432    22355677777776


Q ss_pred             EeccC
Q psy5844         421 VFTKD  425 (442)
Q Consensus       421 vft~d  425 (442)
                      -++=|
T Consensus       483 kyGid  487 (503)
T KOG2451|consen  483 KYGID  487 (503)
T ss_pred             ccchh
Confidence            66644

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=100.00  E-value=4.8e-76  Score=608.70  Aligned_cols=371  Identities=29%  Similarity=0.454  Sum_probs=343.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .|.+++........+.++.+++++++|+|||+.+++. |+..+++.+++++.++....++..+.. .+...+++++|+||
T Consensus       174 eR~~iL~k~a~~L~~~~~ela~~~~~E~GKp~~ea~~-EV~~~i~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~reP~GV  252 (604)
T PLN02419        174 TRQRVMLKFQELIRKNMDKLAMNITTEQGKTLKDSHG-DIFRGLEVVEHACGMATLQMGEYLPNVSNGVDTYSIREPLGV  252 (604)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCcccccCCCccceEEecCccE
Confidence            3445555555555555778899999999999999998 999999999999998877666543321 34557889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA  188 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~  188 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+++.++.|+.|++++.|.
T Consensus       253 V~~I~PwNfPl~l~~~~iapALaAGNtVVlKPSe~tp~ta~~l~~l~~eAGlP~GvvnvV~G~~~~~~~L~~~~~Vd~V~  332 (604)
T PLN02419        253 CAGICPFNFPAMIPLWMFPVAVTCGNTFILKPSEKDPGASVILAELAMEAGLPDGVLNIVHGTNDTVNAICDDEDIRAVS  332 (604)
T ss_pred             EEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHhCcCcceEEEEeCChHHHHHHHhCCCCCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999767889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ +|+|+++|
T Consensus       333 FTGSt~vG~~I~~~Aa-~~lk~v~LELGGknp~IV~~DADld~Aa~~iv~g~f~naGQ~C~A~~Rv~V~~~-~d~f~e~l  410 (604)
T PLN02419        333 FVGSNTAGMHIYARAA-AKGKRIQSNMGAKNHGLVLPDANIDATLNALLAAGFGAAGQRCMALSTVVFVGD-AKSWEDKL  410 (604)
T ss_pred             EeCChHHHHHHHHHHh-ccCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHHhhCCCCcCCCCEEEEeCc-HHHHHHHH
Confidence            9999999999999888 689999999999999999999999999999999999999999999999999999 89999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc----CCCCcccccceeccCcchhHHHHH
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA----GDKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      .++++++++|+|.|+++++||++++.+++++.++|++++.+|+++++||.+.    .+.|+|++|||+.+++++|.++++
T Consensus       411 ~~~~~~l~vG~p~d~~t~~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~~v~~d~~i~~e  490 (604)
T PLN02419        411 VERAKALKVTCGSEPDADLGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILSGVTPDMECYKE  490 (604)
T ss_pred             HHHHHHhccCCCCCCCCCccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEeCCCCCCHHHcC
Confidence            9999999999999999999999999999999999999999999999999752    136899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+||||++++.|++++|+|+++|+++|||+++|||+|..++.++++++++|.|+||+..
T Consensus       491 EiFGPVl~V~~~~~~dEAI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~IN~~~  549 (604)
T PLN02419        491 EIFGPVLVCMQANSFDEAISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIGINVPI  549 (604)
T ss_pred             CCcCCEEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEEEcCCC
Confidence            99999999999999999999999999999999999999999999999999999999863

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=100.00  E-value=5.1e-75  Score=584.16  Aligned_cols=363  Identities=35%  Similarity=0.616  Sum_probs=340.8

Q ss_pred             cCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccceEEEecccccchH
Q psy5844          42 NNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGVCGQIIPWNFPLL  120 (442)
Q Consensus        42 ~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~  120 (442)
                      ..++++.+++++++|+|||+.|++. |+..+++.+++++.+++...+...+.. .+...+++++|+|||++|+|||||+.
T Consensus         8 l~~~~~el~~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~~i~p~N~P~~   86 (409)
T PRK10090          8 IRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTTGILPWNFPFF   86 (409)
T ss_pred             HHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccCCCCCCceeEEEEecccEEEEECCCchHHH
Confidence            3445788899999999999999998 999999999999998877655433222 34567899999999999999999999


Q ss_pred             HHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEeecCCHHHHHHH
Q psy5844         121 MLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLV  199 (442)
Q Consensus       121 ~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~i  199 (442)
                      ..++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|++ +.+..|+.||+++.|.||||+.+|+.|
T Consensus        87 ~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~~~v~~V~ftGs~~~g~~v  166 (409)
T PRK10090         87 LIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPKGVFNLVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKI  166 (409)
T ss_pred             HHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCCCcccEEEEeCCChhHHHHHhcCCCcCEEEEECCHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999966 789999999999999999999999999


Q ss_pred             HhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHHHHHhhcccCC
Q psy5844         200 QQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGD  279 (442)
Q Consensus       200 ~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~  279 (442)
                      ++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|.++++++++|+
T Consensus       167 ~~~aa-~~~~~~~lElgGk~p~iV~~dADld~aa~~iv~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~G~  245 (409)
T PRK10090        167 MAAAA-KNITKVCLELGGKAPAIVMDDADLDLAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGN  245 (409)
T ss_pred             HHHHH-hcCCeEEEECCCCCeEEEcCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCC
Confidence            99888 58999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCC-CCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCC
Q psy5844         280 PFDL-NVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSS  358 (442)
Q Consensus       280 p~~~-~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~  358 (442)
                      |.++ ++++|||+++.+++++.++|++++.+|+++++||.+.+..|+|+.|||+.++++++.++++|+||||+++.+|++
T Consensus       246 p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~FgPvl~v~~~~~  325 (409)
T PRK10090        246 PAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFGPVLPVVAFDT  325 (409)
T ss_pred             CCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecEEEeCCCCCCHHHhCCCCCceEEEEEECC
Confidence            9998 899999999999999999999999999999999977555689999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH
Q psy5844         359 IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV  406 (442)
Q Consensus       359 ~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a  406 (442)
                      ++|+|+++|+++++|+++|||+|.+.+.++++++++|.|+||+.....
T Consensus       326 ~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~iN~~~~~~  373 (409)
T PRK10090        326 LEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENFEA  373 (409)
T ss_pred             HHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCCCC
Confidence            999999999999999999999999999999999999999999876543

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=100.00  E-value=7.4e-75  Score=597.80  Aligned_cols=374  Identities=52%  Similarity=0.875  Sum_probs=346.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      +|.++++.......+.++.+++++++|+|||+.+++..|+..+++.+++++..+++..++..+...+...++.++|+|||
T Consensus        83 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV  162 (501)
T PLN02766         83 ERGRIMMKFADLIEEHIEELAALDTIDAGKLFALGKAVDIPAAAGLLRYYAGAADKIHGETLKMSRQLQGYTLKEPIGVV  162 (501)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEeccceEE
Confidence            44555555555555667788999999999999999755999999999999988877666543332344568899999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++ +.++.|+.||+++.|.
T Consensus       163 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~p~v~~V~  242 (501)
T PLN02766        163 GHIIPWNFPSTMFFMKVAPALAAGCTMVVKPAEQTPLSALFYAHLAKLAGVPDGVINVVTGFGPTAGAAIASHMDVDKVS  242 (501)
T ss_pred             EEECCCCChHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHhcCCCcCcEEEEecCchHHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999976 8899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       243 FTGS~~~G~~i~~~aa~~~l~~~~lElGGknp~iV~~dADl~~Aa~~i~~g~f~n~GQ~C~a~~ri~V~~si~d~f~~~l  322 (501)
T PLN02766        243 FTGSTEVGRKIMQAAATSNLKQVSLELGGKSPLLIFDDADVDMAVDLALLGIFYNKGEICVASSRVYVQEGIYDEFVKKL  322 (501)
T ss_pred             EECcHHHHHHHHHHhhhcCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHH
Confidence            99999999999998873488999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      +++++++++|+|+++++++||+++..+++++.++|++++.+|+++++||...+..|+|++|||+.++++++.++++|+||
T Consensus       323 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE~FG  402 (501)
T PLN02766        323 VEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKGYYIEPTIFTDVTEDMKIAQDEIFG  402 (501)
T ss_pred             HHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhCCccC
Confidence            99999999999999999999999999999999999999999999999997654578999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||+++++|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       403 PVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~iN~~~  457 (501)
T PLN02766        403 PVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIWVNCYF  457 (501)
T ss_pred             ceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999754

>PLN02278 succinic semialdehyde dehydrogenase

Probab=100.00  E-value=2.9e-74  Score=593.52  Aligned_cols=372  Identities=42%  Similarity=0.668  Sum_probs=344.0

Q ss_pred             CCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccceE
Q psy5844          31 KPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGVC  109 (442)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv  109 (442)
                      |..++++......+.++.+++++++|+|||..++.. |+..+++.+++++..+.+..+...+.. .+...+++++|+|||
T Consensus        86 R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-Ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GvV  164 (498)
T PLN02278         86 RSKILRRWYDLIIANKEDLAQLMTLEQGKPLKEAIG-EVAYGASFLEYFAEEAKRVYGDIIPSPFPDRRLLVLKQPVGVV  164 (498)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEeecccEE
Confidence            344444444444455777799999999999999998 999999999999988877655543332 344567889999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.||+++.|.
T Consensus       165 ~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~l~eaglP~gvv~~v~g~~~~~~~~L~~~~~v~~V~  244 (498)
T PLN02278        165 GAITPWNFPLAMITRKVGPALAAGCTVVVKPSELTPLTALAAAELALQAGIPPGVLNVVMGDAPEIGDALLASPKVRKIT  244 (498)
T ss_pred             EEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcccEEEEecCChhhHHHHhcCCCcCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999977 7889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|
T Consensus       245 fTGS~~~G~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~~L  323 (498)
T PLN02278        245 FTGSTAVGKKLMAGAA-ATVKRVSLELGGNAPFIVFDDADLDVAVKGALASKFRNSGQTCVCANRILVQEGIYDKFAEAF  323 (498)
T ss_pred             EECcHHHHHHHHHHHh-hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHhccCCCCCcCCcEEEEeHHHHHHHHHHH
Confidence            9999999999999888 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      +++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||...+.+|+|+.|||+.++.+++.++++|+||
T Consensus       324 ~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~~E~FG  403 (498)
T PLN02278        324 SKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGGTFYEPTVLGDVTEDMLIFREEVFG  403 (498)
T ss_pred             HHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCceEeeEEEecCCCCChhhhCCCcC
Confidence            99999999999999999999999999999999999999999999999997654468999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||++++.|++++|+|+++|+.+|||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       404 PVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~  459 (498)
T PLN02278        404 PVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVGVNEGLI  459 (498)
T ss_pred             CEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999998543

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=100.00  E-value=2.9e-74  Score=586.02  Aligned_cols=375  Identities=22%  Similarity=0.331  Sum_probs=338.8

Q ss_pred             cccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc----ccccCCCcc
Q psy5844          23 AAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK----TIPINGDFF   98 (442)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~   98 (442)
                      ..++.. .|..+++.......++++.+++++++|+|||..++...|+..+++.++|++..+++..+.    ......+..
T Consensus        27 ~~~~~~-~R~~~L~~~a~~l~~~~~ela~~l~~e~GKp~~~a~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (484)
T PLN02174         27 VTRGYE-WRVTQLKKLMIICDNHEPEIVAALRDDLGKPELESSVYEVSLLRNSIKLALKQLKNWMAPEKAKTSLTTFPAS  105 (484)
T ss_pred             CCCCHH-HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcccccccccccCCcc
Confidence            334433 444555555566666678999999999999999997669999999999999887665542    111112345


Q ss_pred             eEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhh
Q psy5844          99 AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAAL  178 (442)
Q Consensus        99 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l  178 (442)
                      .++.++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+ ++|+|++++++|+++.+..|
T Consensus       106 ~~~~~~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPse~tp~~~~~l~~l~~~-~lp~gvv~vv~G~~~~~~~l  184 (484)
T PLN02174        106 AEIVSEPLGVVLVISAWNYPFLLSIDPVIGAISAGNAVVLKPSELAPASSALLAKLLEQ-YLDSSAVRVVEGAVTETTAL  184 (484)
T ss_pred             eEEEEecceEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHH-hCCCCEEEEEECChHHHHHH
Confidence            68999999999999999999999999999999999999999999999999999999999 69999999999866667777


Q ss_pred             hcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhh-ccCCCcccCCCEEEEc
Q psy5844         179 VQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLF-FNMGQCCCAGSRTFVQ  257 (442)
Q Consensus       179 ~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~-~~~Gq~C~s~~~v~V~  257 (442)
                      +. |.+|.|.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|||||
T Consensus       185 ~~-~~vd~V~FTGS~~~G~~I~~~aa-~~l~~v~LELGGk~p~iV~~dADl~~Aa~~i~~g~f~~n~GQ~C~a~~rv~V~  262 (484)
T PLN02174        185 LE-QKWDKIFYTGSSKIGRVIMAAAA-KHLTPVVLELGGKSPVVVDSDTDLKVTVRRIIAGKWGCNNGQACISPDYILTT  262 (484)
T ss_pred             hc-ccCCEEEEECChHHHHHHHHHHH-hcCCcEEEecCCCCeEEEcCCCCHHHHHHHHHHHHhhCCCCCCCCcCcEEEEe
Confidence            76 88999999999999999999988 689999999999999999999999999999999999 6999999999999999


Q ss_pred             CccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcc
Q psy5844         258 DTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRD  337 (442)
Q Consensus       258 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~  337 (442)
                      ++++|+|+++|.++++++++|+|.+ ++++||++++.+++++.++|+++ .+|+++++||... ..|+|+.|||+.++++
T Consensus       263 ~~i~d~f~~~l~~~~~~~~~G~p~~-~~~~Gpli~~~~~~~v~~~i~~a-~~ga~~~~GG~~~-~~g~~~~PTvl~~v~~  339 (484)
T PLN02174        263 KEYAPKVIDAMKKELETFYGKNPME-SKDMSRIVNSTHFDRLSKLLDEK-EVSDKIVYGGEKD-RENLKIAPTILLDVPL  339 (484)
T ss_pred             HHHHHHHHHHHHHHHHhhcCCCCcc-cCCcCCCCCHHHHHHHHHHHHHH-HcCCEEEECCCcC-CCCCEEEEEEEecCCC
Confidence            9999999999999999999999988 79999999999999999999997 7799999998653 4689999999999999


Q ss_pred             hhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         338 DMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       338 ~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +|.++++|+||||+++..|++.+|+|+++|++.+||+++|||+|.+++.++++++++|.|+||+...
T Consensus       340 ~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~IN~~~~  406 (484)
T PLN02174        340 DSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIVVNDIAV  406 (484)
T ss_pred             CChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEEECCCcC
Confidence            9999999999999999999999999999999999999999999999999999999999999998754

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=100.00  E-value=8.7e-74  Score=592.24  Aligned_cols=374  Identities=58%  Similarity=0.951  Sum_probs=345.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .|.++++.......+.++.+++++++|+|||+.++...|+..+++.+++++.++++..+..++...+...++.++|+|||
T Consensus       120 ~R~~~L~~~a~~l~~~~~ela~~~~~e~GK~~~~a~~~Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV  199 (538)
T PLN02466        120 ERSRILLRFADLLEKHNDELAALETWDNGKPYEQSAKAELPMFARLFRYYAGWADKIHGLTVPADGPHHVQTLHEPIGVA  199 (538)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceEE
Confidence            34444444444444557788999999999999999755999999999999988877766544432334568999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++ +.++.|+.||++|.|.
T Consensus       200 ~~I~PwN~P~~l~~~~i~pALaaGN~VVlKPs~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V~  279 (538)
T PLN02466        200 GQIIPWNFPLLMFAWKVGPALACGNTIVLKTAEQTPLSALYAAKLLHEAGLPPGVLNVVSGFGPTAGAALASHMDVDKLA  279 (538)
T ss_pred             EEECCCchHHHHHHHHHhHHHHcCCEEEeECCCCCcHHHHHHHHHHHhcCCCcccEEEEecCchhHHHHHhcCCCcCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999976 7889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       280 FTGS~~~G~~v~~~aa~~~l~pv~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l  359 (538)
T PLN02466        280 FTGSTDTGKIVLELAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHERVYDEFVEKA  359 (538)
T ss_pred             EECCHHHHHHHHHHHHhcCCCcEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHHhhcCCCcCcCcEEEEcHHHHHHHHHHH
Confidence            99999999999998874478999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      +++..++++|+|.|+++++||+++..+++++.+++++++.+|+++++||...++.|+|+.|||+.++++++.++++|+||
T Consensus       360 ~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i~Ptvl~~v~~d~~i~~eE~FG  439 (538)
T PLN02466        360 KARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYIQPTVFSNVQDDMLIAQDEIFG  439 (538)
T ss_pred             HHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEEEEEEEecCCCCCchhcCCccC
Confidence            99999999999999999999999999999999999999999999999998755578999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||+++++|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       440 PVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~IN~~~  494 (538)
T PLN02466        440 PVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVWVNCFD  494 (538)
T ss_pred             cEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999753

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=100.00  E-value=4.6e-74  Score=587.29  Aligned_cols=371  Identities=29%  Similarity=0.447  Sum_probs=340.4

Q ss_pred             CCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceEE
Q psy5844          31 KPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCG  110 (442)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~  110 (442)
                      |.+++........+.++.+++++++|+|||+.+++. |+..+++.+++++...++..+.......+...+++++|+|||+
T Consensus        53 R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV~  131 (462)
T PRK13968         53 RAQKLRDIGKALRARSEEMAQMITREMGKPINQARA-EVAKSANLCDWYAEHGPAMLKAEPTLVENQQAVIEYRPLGTIL  131 (462)
T ss_pred             HHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCceEEEEEeccceEE
Confidence            344444444444456788899999999999999998 9999999999999877655443221113456789999999999


Q ss_pred             EecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEeec
Q psy5844         111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFT  190 (442)
Q Consensus       111 ~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~ft  190 (442)
                      +|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|+++....++.||+++.|.||
T Consensus       132 ~I~PwN~P~~~~~~~~~~ALaaGN~vv~KPs~~tp~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~l~~~~~v~~V~fT  211 (462)
T PRK13968        132 AIMPWNFPLWQVMRGAVPILLAGNGYLLKHAPNVMGCAQLIAQVFKDAGIPQGVYGWLNADNDGVSQMINDSRIAAVTVT  211 (462)
T ss_pred             EEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHcCcCcCcEEEEecCchhhHHHhcCCCCCEEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999866445568899999999999


Q ss_pred             CCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHHH
Q psy5844         191 GSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGE  270 (442)
Q Consensus       191 Gs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~~  270 (442)
                      ||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|++
T Consensus       212 Gs~~~G~~i~~~aa-~~l~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l~~  290 (462)
T PRK13968        212 GSVRAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIIEEGIASAFTERFVA  290 (462)
T ss_pred             CCHHHHHHHHHHHh-hcCCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEECHhHHHHHHHHHHH
Confidence            99999999999988 58999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCCc
Q psy5844         271 RAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPV  350 (442)
Q Consensus       271 ~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPv  350 (442)
                      +++++++|+|.++++++||+++..+++++.+++++++.+|+++++||......|+|++|||+.++++++.++++|+||||
T Consensus       291 ~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGPV  370 (462)
T PRK13968        291 AAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNYYAPTVLANVTPEMTAFREELFGPV  370 (462)
T ss_pred             HHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceEECCEEEeCCCCCChHHhCCCcCCE
Confidence            99999999999999999999999999999999999999999999999764445899999999999999999999999999


Q ss_pred             ccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         351 QQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       351 l~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +++..|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus       371 l~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~iN~~~  423 (462)
T PRK13968        371 AAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVFINGYC  423 (462)
T ss_pred             EEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999864

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=100.00  E-value=1.3e-73  Score=586.54  Aligned_cols=374  Identities=47%  Similarity=0.836  Sum_probs=344.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC----CCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN----GDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P  105 (442)
                      .+.++++.......++++.+++++++|+|||+.++...|+..+++.+++++.++++..+...+..    .+...+.+++|
T Consensus        68 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~r~P  147 (486)
T cd07140          68 DRGRLMYRLADLMEEHQEELATIESLDSGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGKTIPINQARPNRNLTLTKREP  147 (486)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEeec
Confidence            44555555555555557778999999999999999744999999999999988877655543321    22346789999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGV  184 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v  184 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++ +.++.|+.||++
T Consensus       148 ~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v  227 (486)
T cd07140         148 IGVCGIVIPWNYPLMMLAWKMAACLAAGNTVVLKPAQVTPLTALKFAELTVKAGFPKGVINILPGSGSLVGQRLSDHPDV  227 (486)
T ss_pred             cceEEEEcCCchHHHHHHHHHHHHHHhCCEEEEECCccCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHHhcCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999976 788999999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      +.|.||||+.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|
T Consensus       228 ~~v~ftGs~~~g~~i~~~aa~~~l~~v~lElGGk~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~i~~~f  307 (486)
T cd07140         228 RKLGFTGSTPIGKHIMKSCAVSNLKKVSLELGGKSPLIIFADCDMDKAVRMGMSSVFFNKGENCIAAGRLFVEESIHDEF  307 (486)
T ss_pred             CEEEEECcHHHHHHHHHHHHhcCCCeEEEEcCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHH
Confidence            99999999999999999888338899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++|+++++++++|+|.++++++||+++..+++++.++|++++.+|+++++||...+..|+|+.|||+.++++++.++++
T Consensus       308 ~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~e  387 (486)
T cd07140         308 VRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGFFFEPTVFTDVEDHMFIAKE  387 (486)
T ss_pred             HHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeECCEEEeCCCCCChhhhC
Confidence            99999999999999999999999999999999999999999999999999999765557899999999999999999999


Q ss_pred             hhcCCcccccccC--CHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~--~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+||||+++..|+  +++|+++++|++++||+++|||+|.+++.++++++++|.|+||+..
T Consensus       388 E~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~  448 (486)
T cd07140         388 ESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVFVNTYN  448 (486)
T ss_pred             CCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            9999999999998  6999999999999999999999999999999999999999999854

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=100.00  E-value=1.2e-73  Score=585.24  Aligned_cols=373  Identities=35%  Similarity=0.622  Sum_probs=343.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gv  108 (442)
                      .|..+++.......+.++.+++++++|+|||+.++...|+..+++.+++++..++...+...+. ..+...++.++|+||
T Consensus        61 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  140 (472)
T TIGR03374        61 ARAECLLKLADVIEENAQVFAELESRNCGKPLHSVFNDEIPAIVDVFRFFAGAARCLSGLAAGEYLEGHTSMIRRDPLGV  140 (472)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceEEEEEecceE
Confidence            4455555555555666788899999999999999975599999999999998776654432211 134457899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++ +.++.|+.||+++.|
T Consensus       141 V~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gv~~~v~g~~~~~~~~L~~~~~v~~V  219 (472)
T TIGR03374       141 VASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHEKVRMV  219 (472)
T ss_pred             EEEECCCCchHHHHHHHHHHHHhcCCEEEecCCCCCCHHHHHHHHHHHHh-CCcCeEEEEecCchhHHHHHhcCCCcCEE
Confidence            99999999999999999999999999999999999999999999999885 9999999999966 889999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       220 ~fTGS~~~G~~i~~~aa-~~~~~~~lElGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~  298 (472)
T TIGR03374       220 SLTGSIATGEHILSHTA-PSIKRTHMELGGKAPVIVFDDADIDAVVEGVRTFGFYNAGQDCTAACRIYAQRGIYDTLVEK  298 (472)
T ss_pred             EEECCHHHHHHHHHHHh-hcccceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCccccCCEEEEcHHHHHHHHHH
Confidence            99999999999999888 68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcC-CEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQG-AQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |+++++++++|+|.++++++||+++..+++++.++|++++++| +++++||...+..|+|+.|||+.++++++.++++|+
T Consensus       299 l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eE~  378 (472)
T TIGR03374       299 LGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAPTLLAGAKQDDAIVQKEV  378 (472)
T ss_pred             HHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEeeEEEeCCCCCChhhhCCc
Confidence            9999999999999999999999999999999999999999999 799999976544689999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||||++++.|++.+|+++++|+.++||+++|||+|.+++.++++++++|.|+||+...
T Consensus       379 FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~  436 (472)
T TIGR03374       379 FGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTWVNTHFM  436 (472)
T ss_pred             cCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999998663

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=100.00  E-value=1.2e-73  Score=583.78  Aligned_cols=373  Identities=40%  Similarity=0.665  Sum_probs=347.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      ++.+++++......++++.+++++++|+|||..+++. |+..+++.+++++...++..+...+.. .+...+..++|+||
T Consensus        42 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  120 (448)
T TIGR01780        42 ERSSLLRKWYNLMMENKDDLARLITLENGKPLKEAKG-EILYAASFLEWFAEEAKRVYGDTIPSPQSDKRLLVIKQPVGV  120 (448)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeeE
Confidence            4556666665655667888999999999999999998 999999999999987776666543322 34456788999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCC-c-cchhhhhcCCCccE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY-G-DAGAALVQHPGVDK  186 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~-~-~~~~~l~~~~~v~~  186 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|+ + +.++.|+.||+++.
T Consensus       121 v~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~~l~~~~~i~~  200 (448)
T TIGR01780       121 CAAITPWNFPAAMITRKAGAALAAGCTVVVKPAEQTPLSALALARLAEQAGIPKGVLNVITGSRAKEVGKVLCTSPLVRK  200 (448)
T ss_pred             EEEEcCCChHHHHHHHHHHHHHHcCCeEeeECCccchHHHHHHHHHHHHcCCCccceEEEeCCCchHHHHHHhcCCCCCE
Confidence            999999999999999999999999999999999999999999999999999999999999997 5 78899999999999


Q ss_pred             EeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHH
Q psy5844         187 VAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVA  266 (442)
Q Consensus       187 v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~  266 (442)
                      |.||||+.+|+.|++.++ .+++|+++|+|||||+||++|+|++.+++.+++++|.|+||.|++++|||||++++|+|++
T Consensus       201 v~ftGs~~~g~~v~~~aa-~~~~~~~lElGGk~~~iV~~dadl~~aa~~iv~~~f~~sGQ~C~a~~rv~V~~~i~d~f~~  279 (448)
T TIGR01780       201 ISFTGSTNVGKILMKQSA-STVKKVSMELGGNAPFIVFDDADIDQAVEGAMASKFRNAGQTCVCANRLYVHDGIYDEFAK  279 (448)
T ss_pred             EEEECcHHHHHHHHHHHh-hcCCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCceeechHHHHHHHHH
Confidence            999999999999999888 5899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844         267 RSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       267 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      +|.++++++++|+|.++++++||++++.+++++.++|++++++|+++++||...+..|+|+.|||+.++++++.++++|+
T Consensus       280 ~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~  359 (448)
T TIGR01780       280 KLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTVLSNVTQDMLVAKEET  359 (448)
T ss_pred             HHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEecCCCCChHhhCCC
Confidence            99999999999999999999999999999999999999999999999999976545689999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||||+++++|++.+|+++++|+++|||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       360 FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~iN~~~~  417 (448)
T TIGR01780       360 FGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVGINTGLI  417 (448)
T ss_pred             CCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999998653

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=100.00  E-value=1.1e-73  Score=587.86  Aligned_cols=374  Identities=60%  Similarity=1.005  Sum_probs=345.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..+++.......+.++.+++++++|+|||..+++..|+..+++.+++++.++++..+...+...+...+..++|+|||
T Consensus        66 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv  145 (476)
T cd07142          66 ERSRILLRFADLLEKHADELAALETWDNGKPYEQARYAEVPLAARLFRYYAGWADKIHGMTLPADGPHHVYTLHEPIGVV  145 (476)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeceeeE
Confidence            34455555544444567788999999999999999755999999999999998877666544432234567899999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|++ +.++.|+.||+++.|.
T Consensus       146 ~~I~pwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~v~~v~  225 (476)
T cd07142         146 GQIIPWNFPLLMFAWKVGPALACGNTIVLKPAEQTPLSALLAAKLAAEAGLPDGVLNIVTGFGPTAGAAIASHMDVDKVA  225 (476)
T ss_pred             EEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcccHHHHHHHHHHHHcCcCcccEEEEeCCchhHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999977 7889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.+++.+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       226 fTGs~~~G~~v~~~aa~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~i~~~~f~~aGQ~C~a~~rv~V~~~i~d~f~~~l  305 (476)
T cd07142         226 FTGSTEVGKIIMQLAAKSNLKPVTLELGGKSPFIVCEDADVDKAVELAHFALFFNQGQCCCAGSRTFVHESIYDEFVEKA  305 (476)
T ss_pred             EECcHHHHHHHHHHHHHcCCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHhcCCCCCCCCCeeEEEeHHHHHHHHHHH
Confidence            99999999999998883388999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      .+++.++++|+|.++++++||+++..+++++.+++++++.+|+++++||...+..++|+.|||+.++++++.++++|+||
T Consensus       306 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~Fg  385 (476)
T cd07142         306 KARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKGYYIQPTIFSDVKDDMKIARDEIFG  385 (476)
T ss_pred             HHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCCeeEccEEeecCCCCChhhhCCccC
Confidence            99999999999999999999999999999999999999999999999998765578999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||+++++|++++|+|+++|+++++|+++|||+|.+.+.++++++++|.|+||+..
T Consensus       386 Pvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~iN~~~  440 (476)
T cd07142         386 PVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVWVNCYD  440 (476)
T ss_pred             ceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999754

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=100.00  E-value=2.8e-73  Score=585.05  Aligned_cols=374  Identities=39%  Similarity=0.662  Sum_probs=345.8

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc--C----CCcceEEE
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI--N----GDFFAYTR  102 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~  102 (442)
                      ..+.+++++......++++.+++++++|+|||+.+++..|+..+++.+++++.++.+..++....  +    .+...+++
T Consensus        60 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  139 (477)
T cd07113          60 AERGRILLRLADLIEQHGEELAQLETLCSGKSIHLSRAFEVGQSANFLRYFAGWATKINGETLAPSIPSMQGERYTAFTR  139 (477)
T ss_pred             HHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccccccCCCceEEEE
Confidence            34556666665655667888899999999999999985599999999999998887665543321  1    12356789


Q ss_pred             eeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCC
Q psy5844         103 HEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHP  182 (442)
Q Consensus       103 ~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~  182 (442)
                      ++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|+++.++.|+.||
T Consensus       140 ~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKPs~~tp~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~L~~~~  219 (477)
T cd07113         140 REPVGVVAGIVPWNFSVMIAVWKIGAALATGCTIVIKPSEFTPLTLLRVAELAKEAGIPDGVLNVVNGKGAVGAQLISHP  219 (477)
T ss_pred             EeecceEEEEcCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999998667888999999


Q ss_pred             CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         183 GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       183 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      +++.|.||||+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++++|
T Consensus       220 ~v~~V~fTGS~~~G~~i~~~aa-~~~~~~~lElGGkn~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d  298 (477)
T cd07113         220 DVAKVSFTGSVATGKKIGRQAA-SDLTRVTLELGGKNAAAFLKDADIDWVVEGLLTAGFLHQGQVCAAPERFYVHRSKFD  298 (477)
T ss_pred             CCCEEEEECcHHHHHHHHHHHH-hhcCceEeecCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCcCCcEEEECHHHHH
Confidence            9999999999999999999988 589999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +|+++|+++++++++|+|.|+++++||++++.+++++.++|++++.+|+++++||.+..+.|+|+.|||+.++.+++.++
T Consensus       299 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~v~~~~~~~  378 (477)
T cd07113         299 ELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPTLVLARSADSRLM  378 (477)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCEEEecCCCCChHH
Confidence            99999999999999999999999999999999999999999999999999999997654468999999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ++|+||||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||...
T Consensus       379 ~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~  439 (477)
T cd07113         379 REETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVWVNMHT  439 (477)
T ss_pred             hCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999999764

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=5.2e-73  Score=578.79  Aligned_cols=374  Identities=32%  Similarity=0.514  Sum_probs=345.4

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-C--CCcceEEEeec
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-N--GDFFAYTRHEP  105 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~P  105 (442)
                      ..|..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++..+++..+..... .  .+...+++++|
T Consensus        45 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  123 (457)
T PRK09406         45 AQRARWANAAADLLEAEADQVAALMTLEMGKTLASAKA-EALKCAKGFRYYAEHAEALLADEPADAAAVGASRAYVRYQP  123 (457)
T ss_pred             HHHHHHHHHHHHHHHHCHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEec
Confidence            34556666666666666888999999999999999988 99999999999998886665432211 1  23456889999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD  185 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~  185 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++++.+.+..|+.||+++
T Consensus       124 ~GvV~~I~PwN~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~l~~~aGlP~gvv~~v~~g~~~~~~l~~~~~i~  203 (457)
T PRK09406        124 LGVVLAVMPWNFPLWQVVRFAAPALMAGNVGLLKHASNVPQTALYLADLFRRAGFPDGCFQTLLVGSGAVEAILRDPRVA  203 (457)
T ss_pred             ceeEEEECCccchHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHhCCCcCcEEEEcCCchhHHHHhcCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999986446678899999999


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus       204 ~V~fTGs~~~G~~i~~~a~-~~~~~~~lElGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~  282 (457)
T PRK09406        204 AATLTGSEPAGRAVAAIAG-DEIKKTVLELGGSDPFIVMPSADLDRAAETAVTARVQNNGQSCIAAKRFIVHADVYDAFA  282 (457)
T ss_pred             EEEEECcHHHHHHHHHHHH-hcCCceeeecCCCCeeEECCCCCHHHHHHHHHHHHhhCCCCcccCCeEEEEcHHHHHHHH
Confidence            9999999999999999888 589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++|+++++++++|+|.|+++++||++++.+++++.++|++++++|+++++||...+..|+|+.|||+.++.++|.++++|
T Consensus       283 ~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE  362 (457)
T PRK09406        283 EKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPTVITDITPDMRLYTEE  362 (457)
T ss_pred             HHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccEEeecCCCCCHHhhCC
Confidence            99999999999999999999999999999999999999999999999999998755578999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +||||+++..|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|++|+...
T Consensus       363 ~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~  421 (457)
T PRK09406        363 VFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVFINGMTV  421 (457)
T ss_pred             CCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999998653

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=100.00  E-value=7.9e-73  Score=582.29  Aligned_cols=374  Identities=69%  Similarity=1.109  Sum_probs=346.5

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      ++.+++++......++++.+++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||
T Consensus        70 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv  149 (481)
T cd07141          70 ERGRLLNKLADLIERDRAYLASLETLDNGKPFSKSYLVDLPGAIKVLRYYAGWADKIHGKTIPMDGDFFTYTRHEPVGVC  149 (481)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCchHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEeceeEE
Confidence            45555565555555667888999999999999877555999999999999998877766544333334568899999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|++ +.++.|+.||+++.|+
T Consensus       150 ~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V~  229 (481)
T cd07141         150 GQIIPWNFPLLMAAWKLAPALACGNTVVLKPAEQTPLTALYLASLIKEAGFPPGVVNVVPGYGPTAGAAISSHPDIDKVA  229 (481)
T ss_pred             EEEccChhHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999976 7889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++..++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       230 ftGs~~~g~~i~~~aa~~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l  309 (481)
T cd07141         230 FTGSTEVGKLIQQAAGKSNLKRVTLELGGKSPNIVFADADLDYAVEQAHEALFFNMGQCCCAGSRTFVQESIYDEFVKRS  309 (481)
T ss_pred             EECcHHHHHHHHHHhhhhcCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCeEEEEcHHHHHHHHHHH
Confidence            99999999999998873388999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      ++.++++++|+|+|+++++||++++.+++++.++|++++.+|+++++||...+..|+|++|||+.++.+++.++++|+||
T Consensus       310 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~Fg  389 (481)
T cd07141         310 VERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPTVFSDVTDDMRIAKEEIFG  389 (481)
T ss_pred             HHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhhccccC
Confidence            99999999999999999999999999999999999999999999999998755578999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||++++.|++++|+++++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus       390 Pvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~iN~~~  444 (481)
T cd07141         390 PVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVWVNCYN  444 (481)
T ss_pred             CeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999765

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=100.00  E-value=7.8e-73  Score=582.01  Aligned_cols=371  Identities=27%  Similarity=0.464  Sum_probs=338.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .|.+++++......+.++.+++++++|+|||+.+++. |+..+++.++|++..++.+.+...+.. .+...+..++|+||
T Consensus        79 ~R~~~L~~~a~~l~~~~~~la~~~~~e~GK~~~~a~~-ev~~~i~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~P~GV  157 (508)
T PLN02315         79 KRGEIVRQIGDALRAKLDYLGRLVSLEMGKILAEGIG-EVQEIIDMCDFAVGLSRQLNGSIIPSERPNHMMMEVWNPLGI  157 (508)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecceE
Confidence            3445555554444555777899999999999999987 999999999999988776655433322 33445778999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHH----HHHHHHHhCCCCCcEEeecCCccchhhhhcCCCc
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALA----VGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGV  184 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~----l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v  184 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..    +.++|.++|+|+|++|+++|+.+.++.|+.||++
T Consensus       158 V~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~~~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v  237 (508)
T PLN02315        158 VGVITAFNFPCAVLGWNACIALVCGNCVVWKGAPTTPLITIAMTKLVAEVLEKNNLPGAIFTSFCGGAEIGEAIAKDTRI  237 (508)
T ss_pred             EEEECCCcchHHHHHHHHhHHHHcCCEEEeeCCCcChHHHHHHHHHHHHHHHHcCCCcccEEEecCChHHHHHHhcCCCC
Confidence            999999999999999999999999999999999999999887    6788899999999999999844889999999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      +.|.||||+.+|+.|++.++ .+.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus       238 ~~v~fTGS~~~G~~v~~~aa-~~~~~~~lElgGknp~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f  316 (508)
T PLN02315        238 PLVSFTGSSKVGLMVQQTVN-ARFGKCLLELSGNNAIIVMDDADIQLAVRSVLFAAVGTAGQRCTTCRRLLLHESIYDDV  316 (508)
T ss_pred             CEEEEECCHHHHHHHHHHHH-hcCCCEEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeHHHHHHH
Confidence            99999999999999999888 58899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...+..|+|++|||+ ++++++.++++
T Consensus       317 ~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~Ptvl-~v~~~~~i~~e  395 (508)
T PLN02315        317 LEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQPTIV-EISPDADVVKE  395 (508)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEecEEE-ecCCCChHHhC
Confidence            99999999999999999999999999999999999999999999999999999765557899999999 58899999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhcc--ccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQ--GLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~--~~~~G~V~vN~~~  403 (442)
                      |+||||+++.+|++++|+++++|+.+++|+++|||+|.+.+.++++  ++++|.|++|+..
T Consensus       396 E~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~iN~~~  456 (508)
T PLN02315        396 ELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVNVNIPT  456 (508)
T ss_pred             CCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEEEcCCC
Confidence            9999999999999999999999999999999999999999999984  7999999999854

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=100.00  E-value=5.9e-73  Score=574.76  Aligned_cols=373  Identities=29%  Similarity=0.392  Sum_probs=344.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..++++......+.++.+++++++|+|||+.++.. |+..+++.+++++..+.+..+.......+...+++++|+|||
T Consensus        23 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  101 (431)
T cd07095          23 ERAAILRRFAELLKANKEELARLISRETGKPLWEAQT-EVAAMAGKIDISIKAYHERTGERATPMAQGRAVLRHRPHGVM  101 (431)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEecceEE
Confidence            4556666665555566888999999999999999998 999999999999887766654432222456688999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|+.+.+..|+.||+++.|.|
T Consensus       102 ~~I~PwN~P~~~~~~~~~~ALaaGN~VI~Kps~~~~~~~~~l~~~~~~ag~P~g~~~~v~g~~~~~~~l~~~~~v~~v~f  181 (431)
T cd07095         102 AVFGPFNFPGHLPNGHIVPALLAGNTVVFKPSELTPAVAELMVELWEEAGLPPGVLNLVQGGRETGEALAAHEGIDGLLF  181 (431)
T ss_pred             EEECCCchHHHHHHHHHHHHHhcCCEEEeeCCCCCcHHHHHHHHHHHHhCcChhHheEEeCcHHHHHHHhcCCCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999985578899999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCc-cHHHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDT-IYDEFVARS  268 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~-~~~~f~~~l  268 (442)
                      |||+.+|+.|++.++.+..+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++|
T Consensus       182 tGs~~~g~~i~~~~a~~~~~~~~lElgG~~~~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~i~d~f~~~l  261 (431)
T cd07095         182 TGSAATGLLLHRQFAGRPGKILALEMGGNNPLVVWDVADIDAAAYLIVQSAFLTAGQRCTCARRLIVPDGAVGDAFLERL  261 (431)
T ss_pred             ECcHHHHHHHHHHhhccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcCcchHHHHHHHH
Confidence            9999999999998764557999999999999999999999999999999999999999999999999999 999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      +++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...+++|+|+.|||+ ++.+++.++++|+||
T Consensus       262 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Ptv~-~v~~~~~i~~eE~Fg  340 (431)
T cd07095         262 VEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPGII-DVTDAADVPDEEIFG  340 (431)
T ss_pred             HHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCEEE-ecCCCChHHhCCCcC
Confidence            9999999999999999999999999999999999999999999999998765557899999999 588889999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||+++++|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|++|+...
T Consensus       341 Pvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~iN~~~~  396 (431)
T cd07095         341 PLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVNWNRPTT  396 (431)
T ss_pred             CeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999997653

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=100.00  E-value=1.3e-72  Score=573.17  Aligned_cols=371  Identities=37%  Similarity=0.566  Sum_probs=345.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc-ccccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~P~Gv  108 (442)
                      .|.+++........+.++.+++++++|+|||..+++. |+..+++.+++++..+++..+. ..+. .+...+++++|+||
T Consensus        22 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv   99 (429)
T cd07100          22 ERAALLRKLADLLRERKDELARLITLEMGKPIAEARA-EVEKCAWICRYYAENAEAFLADEPIET-DAGKAYVRYEPLGV   99 (429)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeccC-CCceEEEEEEeeeE
Confidence            4455666665555666888999999999999999998 9999999999999888766432 2222 34557889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA  188 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~  188 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++++++|+++.+..|+.||+++.|.
T Consensus       100 V~~I~P~N~Pl~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~l~~aglP~gvv~~v~g~~~~~~~l~~~~~i~~v~  179 (429)
T cd07100         100 VLGIMPWNFPFWQVFRFAAPNLMAGNTVLLKHASNVPGCALAIEELFREAGFPEGVFQNLLIDSDQVEAIIADPRVRGVT  179 (429)
T ss_pred             EEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCchhHHHHhcCCCCCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999667778999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|
T Consensus       180 fTGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~v~~~i~~~f~~~l  258 (429)
T cd07100         180 LTGSERAGRAVAAEAG-KNLKKSVLELGGSDPFIVLDDADLDKAVKTAVKGRLQNAGQSCIAAKRFIVHEDVYDEFLEKF  258 (429)
T ss_pred             EECcHHHHHHHHHHHh-hcCcceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHH
Confidence            9999999999999988 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      +++++++++|+|+|+++++||++++.+++++.+++++++.+|+++++||...+..|+|+.||++.++.+++.++++|+||
T Consensus       259 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv~~~~~~~~~~~~eE~fg  338 (429)
T cd07100         259 VEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFYPPTVLTDVTPGMPAYDEELFG  338 (429)
T ss_pred             HHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEcCEEeecCCCCCHHHhCCCCC
Confidence            99999999999999999999999999999999999999999999999997654468999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||+++..|++.+|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|++.
T Consensus       339 Pvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~  393 (429)
T cd07100         339 PVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVFINGMV  393 (429)
T ss_pred             CeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999876

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=100.00  E-value=7.8e-73  Score=581.56  Aligned_cols=373  Identities=42%  Similarity=0.688  Sum_probs=344.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .|..++++......+.++.+++++++|+|||+.+++. |+..+++.+++++...++..+...... .+...+++++|+||
T Consensus        60 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  138 (473)
T cd07097          60 ARADILDKAGDELEARKEELARLLTREEGKTLPEARG-EVTRAGQIFRYYAGEALRLSGETLPSTRPGVEVETTREPLGV  138 (473)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEEeeee
Confidence            3444555554444456788899999999999999998 999999999999988776655433222 35567899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++ +.+..|+.||+++.|
T Consensus       139 v~~I~P~N~Pl~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~l~~~~~v~~v  218 (473)
T cd07097         139 VGLITPWNFPIAIPAWKIAPALAYGNTVVFKPAELTPASAWALVEILEEAGLPAGVFNLVMGSGSEVGQALVEHPDVDAV  218 (473)
T ss_pred             EEEEcccChHHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHHcCCCCcceEEeccCchHHHHHHhcCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999976 789999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       219 ~fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~  297 (473)
T cd07097         219 SFTGSTAVGRRIAAAAA-ARGARVQLEMGGKNPLVVLDDADLDLAVECAVQGAFFSTGQRCTASSRLIVTEGIHDRFVEA  297 (473)
T ss_pred             EEECcHHHHHHHHHHHh-ccCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCeeEEEehhHHHHHHHH
Confidence            99999999999999988 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccCcchhHHHHHh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      |.++++++++|+|.|+++++|||+++.+++++.+++++++.+|+++++||...+  +.|+|+.|||+.++++++.++.+|
T Consensus       298 l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE  377 (473)
T cd07097         298 LVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEGYYLAPALFAGVTNDMRIAREE  377 (473)
T ss_pred             HHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEeccCCCCChhhhCC
Confidence            999999999999999999999999999999999999999999999999997543  357899999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +||||++++.|++++|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       378 ~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~  436 (473)
T cd07097         378 IFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVMVNLPTA  436 (473)
T ss_pred             CcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999998653

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>PLN02467 betaine aldehyde dehydrogenase

Probab=100.00  E-value=2.3e-72  Score=578.98  Aligned_cols=372  Identities=42%  Similarity=0.719  Sum_probs=345.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc---ccC-CCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI---PIN-GDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~P  105 (442)
                      +|.+++.+......++++.+++++++|+|||+.+++. |+..+++.+++++.+++++.+...   ..+ .+...+++++|
T Consensus        73 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  151 (503)
T PLN02467         73 VRAKYLRAIAAKITERKSELAKLETLDCGKPLDEAAW-DMDDVAGCFEYYADLAEALDAKQKAPVSLPMETFKGYVLKEP  151 (503)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEec
Confidence            4555555555555666888899999999999999998 999999999999998877755431   112 23457899999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGV  184 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v  184 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++ +.++.|+.||.+
T Consensus       152 ~GVv~~I~PwN~P~~~~~~~i~~ALaaGN~Vv~Kps~~tp~~~~~l~~~~~eag~P~gvv~~v~g~~~~~~~~L~~~~~v  231 (503)
T PLN02467        152 LGVVGLITPWNYPLLMATWKVAPALAAGCTAVLKPSELASVTCLELADICREVGLPPGVLNVVTGLGTEAGAPLASHPGV  231 (503)
T ss_pred             CceEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHcCcCcCeEEEEeCCchhHHHHHhcCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999976 788999999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      +.|.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus       232 ~~v~fTGs~~~g~~v~~~aa-~~~~~~~lElGG~~~~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f  310 (503)
T PLN02467        232 DKIAFTGSTATGRKIMTAAA-QMVKPVSLELGGKSPIIVFDDVDLDKAVEWAMFGCFWTNGQICSATSRLLVHERIASEF  310 (503)
T ss_pred             CEEEEECCHHHHHHHHHHHh-ccCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhhcCCCCCCCcEEEEcHHHHHHH
Confidence            99999999999999999988 68999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccCcchhHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +++|.++++++++|||.|+++++||+++..+++++.+++++++.+|+++++||...+  ..|+|+.||++.++++++.++
T Consensus       311 ~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i~  390 (503)
T PLN02467        311 LEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFIEPTIITDVTTSMQIW  390 (503)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEEeeEEEeCCCCCChHh
Confidence            999999999999999999999999999999999999999999999999999997532  358999999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ++|+||||+++..|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       391 ~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~  451 (503)
T PLN02467        391 REEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVWINCSQ  451 (503)
T ss_pred             hCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999999865

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=100.00  E-value=2.6e-72  Score=573.30  Aligned_cols=373  Identities=38%  Similarity=0.590  Sum_probs=346.7

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      +|..+++.......++++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+...+...+++++|+|||
T Consensus        43 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-Ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv  121 (455)
T cd07120          43 LRARVLLELADAFEANAERLARLLALENGKILGEARF-EISGAISELRYYAGLARTEAGRMIEPEPGSFSLVLREPMGVA  121 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEecceeE
Confidence            4556666665656666888999999999999999998 999999999999988877666543322455678999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHH-hCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE-AGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~-aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.+ +|+|+|++++++|++ +.++.|+.||+++.|
T Consensus       122 ~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~~~~~~~l~~~~~~aag~P~g~~~~v~g~~~~~~~~l~~~~~v~~v  201 (455)
T cd07120         122 GIIVPWNSPVVLLVRSLAPALAAGCTVVVKPAGQTAQINAAIIRILAEIPSLPAGVVNLFTESGSEGAAHLVASPDVDVI  201 (455)
T ss_pred             EEECCCchHHHHHHHHHHHHHHcCCEEEeECCCCChHHHHHHHHHHHHhcCCCccceEEEecCchhHHHHHhcCCCCCEE
Confidence            999999999999999999999999999999999999999999999999 799999999999876 788999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .++||+++|+||+||+||++|+|++.|++.+++++|.|+||.|++++|||||++++++|+++
T Consensus       202 ~fTGs~~~g~~i~~~aa-~~~~~~~lElGG~~~~IV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~  280 (455)
T cd07120         202 SFTGSTATGRAIMAAAA-PTLKRLGLELGGKTPCIVFDDADLDAALPKLERALTIFAGQFCMAGSRVLVQRSIADEVRDR  280 (455)
T ss_pred             EEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhCCCCCCCCeEEEEcHHHHHHHHHH
Confidence            99999999999999888 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC---CCCcccccceeccCcchhHHHHH
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG---DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      |+++++++++|+|.|+++++||++++.+++++++++++++.+|+++++||...+   ..|+|+.|||+.++.+++.++.+
T Consensus       281 l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~~~Ptvl~~~~~d~~i~~~  360 (455)
T cd07120         281 LAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAFLRPTLLEVDDPDADIVQE  360 (455)
T ss_pred             HHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCceECCEEEecCCCCChhhhC
Confidence            999999999999999999999999999999999999999999999999876433   25899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |+||||++++.|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       361 E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~iN~~~~  420 (455)
T cd07120         361 EIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVWINDWNK  420 (455)
T ss_pred             cCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999999998753

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=2.4e-72  Score=579.65  Aligned_cols=373  Identities=46%  Similarity=0.771  Sum_probs=345.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .|.+++++...+..+.++.+++++++|+|||+.+++..|+..+++.+++++.+++...++..+...+...+.+++|+|||
T Consensus        67 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~PlGVv  146 (488)
T PRK13252         67 ERSRILRRAVDILRERNDELAALETLDTGKPIQETSVVDIVTGADVLEYYAGLAPALEGEQIPLRGGSFVYTRREPLGVC  146 (488)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceeccCCCceEEEEEeeeeEE
Confidence            44555555555555667788999999999999999855999999999999988877656544333445578999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+++.++.|+.||+++.|.|
T Consensus       147 ~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~t~~~l~~~~~~aglP~g~v~~v~g~~~~~~~L~~~~~vd~V~f  226 (488)
T PRK13252        147 AGIGAWNYPIQIACWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGLPDGVFNVVQGDGRVGAWLTEHPDIAKVSF  226 (488)
T ss_pred             EEECCCchHHHHHHHHHHHHHhcCCeEEEeCCccCcHHHHHHHHHHHHcCcCcccEEEEecCcHHHHHHhcCCCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999986678889999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG  269 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~  269 (442)
                      |||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus       227 TGS~~~g~~i~~~aa-~~l~~~~lElgG~~p~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~  305 (488)
T PRK13252        227 TGGVPTGKKVMAAAA-ASLKEVTMELGGKSPLIVFDDADLDRAADIAMLANFYSSGQVCTNGTRVFVQKSIKAAFEARLL  305 (488)
T ss_pred             ECcHHHHHHHHHHHh-hcCCcEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeEEEEcHHHHHHHHHHHH
Confidence            999999999999888 5799999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHHHh
Q psy5844         270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++++++++|||.++++++||++++.+++++++++++++.+|+++++||...+    ..|+|++|||+.++.+++.++++|
T Consensus       306 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~eE  385 (488)
T PRK13252        306 ERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAFVAPTVFTDCTDDMTIVREE  385 (488)
T ss_pred             HHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeEEccEEeccCCCCChHhhCC
Confidence            9999999999999999999999999999999999999999999999986432    358999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +||||++++.|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus       386 ~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~iN~~~  443 (488)
T PRK13252        386 IFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICWINTWG  443 (488)
T ss_pred             CCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999854

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=100.00  E-value=2.1e-72  Score=579.13  Aligned_cols=372  Identities=33%  Similarity=0.511  Sum_probs=342.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gv  108 (442)
                      .+..++++......+.++.+++++++|+|||+.+++. |+..+++.+++++...+...++.... ..+...+..++|+||
T Consensus        61 ~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  139 (478)
T cd07085          61 KRQQVMFKFRQLLEENLDELARLITLEHGKTLADARG-DVLRGLEVVEFACSIPHLLKGEYLENVARGIDTYSYRQPLGV  139 (478)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeecccCCCCceeEEEEecceE
Confidence            4444555554444455677899999999999999998 99999999999987766555543322 134457899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA  188 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~  188 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|+.+.++.|+.||+++.|.
T Consensus       140 v~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~  219 (478)
T cd07085         140 VAGITPFNFPAMIPLWMFPMAIACGNTFVLKPSERVPGAAMRLAELLQEAGLPDGVLNVVHGGKEAVNALLDHPDIKAVS  219 (478)
T ss_pred             EEEECCCChHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHhCCCCCcEEEEecCHHHHHHHhcCCCcCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999998667889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       220 fTGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~L  298 (478)
T cd07085         220 FVGSTPVGEYIYERAA-ANGKRVQALGGAKNHAVVMPDADLEQTANALVGAAFGAAGQRCMALSVAVAVGDEADEWIPKL  298 (478)
T ss_pred             EECCHHHHHHHHHHHh-hcCCcEEecCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEeHHHHHHHHHHH
Confidence            9999999999999888 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHHH
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||....    .+|+|+.|||+.++.+++.++++
T Consensus       299 ~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~e  378 (478)
T cd07085         299 VERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNFVGPTILDNVTPDMKIYKE  378 (478)
T ss_pred             HHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeEEcCEEEecCCCCChhhhC
Confidence            99999999999999999999999999999999999999999999999987532    36899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       379 E~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~  437 (478)
T cd07085         379 EIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVGINVPI  437 (478)
T ss_pred             cCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCC
Confidence            99999999999999999999999999999999999999999999999999999999864

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=100.00  E-value=5.7e-72  Score=575.94  Aligned_cols=374  Identities=61%  Similarity=1.033  Sum_probs=345.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.++++.......+.++.+++++++|+|||+.++...|+..+++.+++++.++++..++..+...+...+.+++|+|||
T Consensus        66 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  145 (476)
T cd07091          66 ERGRLLNKLADLIERDRDELAALESLDNGKPLEESAKGDVALSIKCLRYYAGWADKIQGKTIPIDGNFLAYTRREPIGVC  145 (476)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeceeEE
Confidence            34444555544445557778999999999999777555999999999999988877666544433456678999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.||++|.|.
T Consensus       146 ~~I~p~N~P~~~~~~~~~~AL~aGN~VvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~L~~~~~vd~V~  225 (476)
T cd07091         146 GQIIPWNFPLLMLAWKLAPALAAGNTVVLKPAEQTPLSALYLAELIKEAGFPPGVVNIVPGFGPTAGAAISSHMDVDKIA  225 (476)
T ss_pred             EEECCCcCHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCCCcEEEEeCCChhHHHHHhcCCCcCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999966 7889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++..+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|
T Consensus       226 fTGs~~~g~~v~~~aa~~~~~~~~lElgG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~~~f~~~L  305 (476)
T cd07091         226 FTGSTAVGRTIMEAAAKSNLKKVTLELGGKSPNIVFDDADLDKAVEWAAFGIFFNQGQCCCAGSRIFVQESIYDEFVEKF  305 (476)
T ss_pred             EECcHHHHHHHHHHHHhcCCceEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHHHHHHHHHHH
Confidence            99999999999998874488999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      +++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||....+.++|+.|||+.++++++.++++|+||
T Consensus       306 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~Fg  385 (476)
T cd07091         306 KARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYFIQPTVFTDVKDDMKIAKEEIFG  385 (476)
T ss_pred             HHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECcEEecCCCCCChhhhCCCCC
Confidence            99999999999999999999999999999999999999999999999998765578999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||++++.|++++|+++++|+.++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus       386 Pvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~iN~~~  440 (476)
T cd07091         386 PVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVWVNTYN  440 (476)
T ss_pred             CeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999864

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=3.7e-72  Score=577.30  Aligned_cols=373  Identities=28%  Similarity=0.389  Sum_probs=341.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.+++++......++++.+++++++|+|||+.+++. |+..+++.+++++.+..+..+.......+...+++++|+|||
T Consensus        60 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  138 (487)
T PRK09457         60 ERQAIVERFAALLEENKEELAEVIARETGKPLWEAAT-EVTAMINKIAISIQAYHERTGEKRSEMADGAAVLRHRPHGVV  138 (487)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEeccEEE
Confidence            4555566665555667888899999999999999998 999999999998877655544433222345578999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|+.+.++.|+.||+++.|.|
T Consensus       139 ~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKPs~~tp~t~~~l~~l~~~aGlP~gvv~~v~g~~~~~~~L~~~~~v~~V~f  218 (487)
T PRK09457        139 AVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAELTVKLWQQAGLPAGVLNLVQGGRETGKALAAHPDIDGLLF  218 (487)
T ss_pred             EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHhcCCCcCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999985588999999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH-HHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY-DEFVARS  268 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~-~~f~~~l  268 (442)
                      |||+.+|+.|.+.+++...+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|
T Consensus       219 TGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~IV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~d~f~~~l  298 (487)
T PRK09457        219 TGSANTGYLLHRQFAGQPEKILALEMGGNNPLVIDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPQGAQGDAFLARL  298 (487)
T ss_pred             ECCHHHHHHHHHHHhhcCCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHhhccCCCCCCCceEEEeccccHHHHHHHH
Confidence            999999999999876445678999999999999999999999999999999999999999999999999998 9999999


Q ss_pred             HHHHhhcccCCCC-CCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         269 GERAKRRTVGDPF-DLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       269 ~~~~~~~~~g~p~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      +++++++++|+|+ ++++++||+++..+++++.+++++++.+|+++++||...+++++|+.|||+ ++.+++.++.+|+|
T Consensus       299 ~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl-~v~~~~~i~~eE~F  377 (487)
T PRK09457        299 VAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTGLLTPGII-DVTGVAELPDEEYF  377 (487)
T ss_pred             HHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCeeEecEEe-ccCCCChHHhCCCc
Confidence            9999999999996 788999999999999999999999999999999988654556899999999 68889999999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |||+++..|++++|+|+++|+.++||+++|||+|.+.++++++++++|.|++|+...
T Consensus       378 GPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~  434 (487)
T PRK09457        378 GPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVNWNKPLT  434 (487)
T ss_pred             CCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCC
Confidence            999999999999999999999999999999999999999999999999999998754

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=100.00  E-value=5.4e-72  Score=576.08  Aligned_cols=374  Identities=37%  Similarity=0.649  Sum_probs=344.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc--C--CCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI--N--GDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~--~--~~~~~~~~~~P  105 (442)
                      .+.+++.+......++++.+++++++|+|||..++...|+..+++.+++++..++...+...+.  +  .+...+.+++|
T Consensus        60 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  139 (481)
T TIGR03216        60 ERADLLYAVADEIERRFDDFLAAEVADTGKPRSLASHLDIPRGAANFRVFADVVKNAPTECFEMATPDGKGALNYAVRKP  139 (481)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccccCCCCCCceeEEEEec
Confidence            4555566665555566788899999999999999975599999999999998876654443321  1  13456789999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc--cchhhhhcCCC
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG--DAGAALVQHPG  183 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~--~~~~~l~~~~~  183 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++.++.++|.++|+|+|++++++|++  +.++.|..||+
T Consensus       140 ~Gvv~~I~p~N~Pl~~~~~~~~~ALaaGN~vvlKPs~~tp~t~~~l~~l~~~aglP~g~~~~v~g~~~~~~~~~l~~~~~  219 (481)
T TIGR03216       140 LGVVGVISPWNLPLLLMTWKVGPALACGNTVVVKPSEETPGTATLLGEVMNAVGVPKGVYNVVHGFGPDSAGEFLTRHPG  219 (481)
T ss_pred             cceEEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcCceEEEecCChhHHHHHHhcCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999855  47888999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      +|.|.||||+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++++++
T Consensus       220 vd~v~fTGS~~~G~~i~~~aa-~~~~~~~lElgG~n~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~  298 (481)
T TIGR03216       220 VDAITFTGETRTGSAIMKAAA-DGVKPVSFELGGKNAAIVFADCDFDAAVAGILRSAFLNTGQVCLGTERVYVERPIFDR  298 (481)
T ss_pred             CCEEEEECCHHHHHHHHHHHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHH
Confidence            999999999999999999988 5899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-----CCCcccccceeccCcch
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-----DKGFYVQPTVFANVRDD  338 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-----~~g~~v~pti~~~~~~~  338 (442)
                      |+++|.++++++++|+|.|+++++||++++.+++++.++|++++.+|+++++||....     .+|+|+.|||+.+++++
T Consensus       299 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~PTvl~~v~~~  378 (481)
T TIGR03216       299 FVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGAWVQPTIWTGLPDS  378 (481)
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCceEccEEEeCCCCC
Confidence            9999999999999999999999999999999999999999999999999999997532     36899999999999999


Q ss_pred             hHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         339 MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       339 ~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +.++++|+||||+++..|++.+|+++++|+.+++|+++|||+|.+.+.++++++++|.|++|+...
T Consensus       379 ~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~  444 (481)
T TIGR03216       379 ARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVWVNSWFL  444 (481)
T ss_pred             CHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999999999999998654

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=100.00  E-value=4e-72  Score=580.21  Aligned_cols=382  Identities=28%  Similarity=0.439  Sum_probs=343.6

Q ss_pred             ccccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcceE
Q psy5844          22 AAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAY  100 (442)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~  100 (442)
                      |..++...|...+.+.+..+..++++.+++++++|+|||+.++...|+..+++.++|++.++++..+..... +.+...+
T Consensus        85 W~~~~~~~R~~~L~~~a~~l~~~~~~ela~~~~~e~Gk~~~~a~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~  164 (522)
T cd07123          85 WARMPFEDRAAIFLKAADLLSGKYRYELNAATMLGQGKNVWQAEIDAACELIDFLRFNVKYAEELYAQQPLSSPAGVWNR  164 (522)
T ss_pred             HhcCCHHHHHHHHHHHHHHHHhhCHHHHHHHHHHhcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeE
Confidence            334444444444444444455457888899999999999999976689999999999998887765543221 1355678


Q ss_pred             EEeecc-ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhh
Q psy5844         101 TRHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAAL  178 (442)
Q Consensus       101 ~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l  178 (442)
                      ++++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+++|++ +.++.|
T Consensus       165 ~~~~P~~GVv~~I~PwNfP~~~~~~~~~pal-aGN~VVlKPs~~tp~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~g~~L  243 (522)
T cd07123         165 LEYRPLEGFVYAVSPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAVLSNYLVYKILEEAGLPPGVINFVPGDGPVVGDTV  243 (522)
T ss_pred             EEEecCCceEEEECCcccHHHHHHHHHHHHH-hCCEEEEECCCCCCHHHHHHHHHHHHcCcCCCcEEEEecCchHHHHHH
Confidence            999998 999999999999999999999999 69999999999999999999999999999999999999977 789999


Q ss_pred             hcCCCccEEeecCCHHHHHHHHhhccCCCCc------eeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCC
Q psy5844         179 VQHPGVDKVAFTGSTEVGKLVQQGSGASNLK------RTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGS  252 (442)
Q Consensus       179 ~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~------~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~  252 (442)
                      +.||+++.|.||||+.+|+.|++.++ .+++      |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++
T Consensus       244 ~~~~~v~~V~FTGS~~~G~~i~~~aa-~~l~~~~~~~~v~lElGGkn~~IV~~dAdl~~Aa~~i~~~~f~~aGQ~C~a~~  322 (522)
T cd07123         244 LASPHLAGLHFTGSTPTFKSLWKQIG-ENLDRYRTYPRIVGETGGKNFHLVHPSADVDSLVTATVRGAFEYQGQKCSAAS  322 (522)
T ss_pred             hcCCCcCEEEEECCHHHHHHHHHHHH-hhcccccccCCEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCc
Confidence            99999999999999999999999888 4665      8999999999999999999999999999999999999999999


Q ss_pred             EEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhc-CCEEEeCCcccCCCCcccccce
Q psy5844         253 RTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQ-GAQLVAGGGRAGDKGFYVQPTV  331 (442)
Q Consensus       253 ~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~~~g~~v~pti  331 (442)
                      |||||++++|+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++++ |+++++||......|+|+.|||
T Consensus       323 rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~g~f~~PTv  402 (522)
T cd07123         323 RAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSVGYFVEPTV  402 (522)
T ss_pred             EEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCCCceEcCEE
Confidence            999999999999999999999999999999999999999999999999999999999 9999999876444689999999


Q ss_pred             eccCcchhHHHHHhhcCCcccccccCC--HHHHHHHHhcCC-CCceEEEecCCCChhhhhcccc--EeeeEEeeCCHHH
Q psy5844         332 FANVRDDMKIAREEIFGPVQQLIRFSS--IEEVIERANNSD-YGLAAAVFTKDLDKTNYVTQGL--RAGTLIRFSSIEE  405 (442)
Q Consensus       332 ~~~~~~~~~~~~~e~fgPvl~v~~~~~--~~eai~~an~~~-~gl~~~v~s~d~~~~~~~~~~~--~~G~V~vN~~~~~  405 (442)
                      +.++++++.++++|+||||+++++|++  ++|+|+++|++. |+|+++|||+|.+.+.++++++  ++|.|+||+....
T Consensus       403 l~~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v~iN~~~~~  481 (522)
T cd07123         403 IETTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNFYINDKPTG  481 (522)
T ss_pred             EeCCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEEEECCCCCC
Confidence            999999999999999999999999994  799999999984 9999999999999999999996  5999999986543

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=100.00  E-value=8.5e-72  Score=573.35  Aligned_cols=374  Identities=54%  Similarity=0.911  Sum_probs=344.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .|.+++........+.++.+++++++|+|||..++...|+..+++.+++++.++++..++......+...+..++|+|||
T Consensus        69 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~a~~a~~~~g~~~~~~~~~~~~~~~~P~GVv  148 (481)
T cd07143          69 KRGRCLSKLADLMERNLDYLASIEALDNGKTFGTAKRVDVQASADTFRYYGGWADKIHGQVIETDIKKLTYTRHEPIGVC  148 (481)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEecceeE
Confidence            34445555544445557788999999999999776544999999999999999877655543322345578899999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.||.+|.|.
T Consensus       149 ~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~V~  228 (481)
T cd07143         149 GQIIPWNFPLLMCAWKIAPALAAGNTIVLKPSELTPLSALYMTKLIPEAGFPPGVINVVSGYGRTCGNAISSHMDIDKVA  228 (481)
T ss_pred             EEECCCcChHHHHHHHHHHHHHcCCEEEEeCCCCCcHHHHHHHHHHHhcCcCcccEEEEeCCchhHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999976 7889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.+++..++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       229 fTGs~~~G~~i~~~aa~~~~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~naGQ~C~a~~rv~V~~~i~d~f~~~l  308 (481)
T cd07143         229 FTGSTLVGRKVMEAAAKSNLKKVTLELGGKSPNIVFDDADLESAVVWTAYGIFFNHGQVCCAGSRIYVQEGIYDKFVKRF  308 (481)
T ss_pred             EECchHHHHHHHHHHHHhcCCEEEeecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEeHhHHHHHHHHH
Confidence            99999999999998874378999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      .+.++++++|+|.++++++||++++.+++++.++|++++.+|+++++||....+.|+|+.|||+.++.+++.++.+|+||
T Consensus       309 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~Fg  388 (481)
T cd07143         309 KEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEGYFIEPTIFTDVTEDMKIVKEEIFG  388 (481)
T ss_pred             HHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCceEEeeEEEecCCCCChhhhcCCcC
Confidence            99999999999999999999999999999999999999999999999998755578999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||+++..|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       389 Pvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~  443 (481)
T cd07143         389 PVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVWVNCYN  443 (481)
T ss_pred             CeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999864

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=100.00  E-value=5.7e-72  Score=574.50  Aligned_cols=372  Identities=33%  Similarity=0.515  Sum_probs=340.0

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccc
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVG  107 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~G  107 (442)
                      .++.+++.+......++++.+++++++|+|||+.++.. |+..+++.+++++...+.+.+...+.. .+...+..++|+|
T Consensus        56 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  134 (474)
T cd07130          56 PKRGEIVRQIGDALRKKKEALGKLVSLEMGKILPEGLG-EVQEMIDICDFAVGLSRQLYGLTIPSERPGHRMMEQWNPLG  134 (474)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceEEEEEecce
Confidence            35566666666666677888899999999999999997 999999999999887765544433222 3445678899999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHH----HHhCCCCCcEEeecCCccchhhhhcCCC
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALI----AEAGIPEGVVNIVPGYGDAGAALVQHPG  183 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l----~~aglp~~~~~~v~~~~~~~~~l~~~~~  183 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++    .++|+|+|++++++|+.+.++.|+.||+
T Consensus       135 vv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~l~~~~~~~aglP~gv~~~v~g~~~~~~~L~~~~~  214 (474)
T cd07130         135 VVGVITAFNFPVAVWGWNAAIALVCGNVVVWKPSPTTPLTAIAVTKIVARVLEKNGLPGAIASLVCGGADVGEALVKDPR  214 (474)
T ss_pred             eEEEEccCCCHHHHHHHHhhHHHHcCCeEEeeCCccCHHHHHHHHHHHHHHHHhcCCCCCcEEEEeCChhHHHHHhcCCC
Confidence            999999999999999999999999999999999999999998877664    6899999999999986677999999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      ++.|.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+
T Consensus       215 vd~V~fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~p~iV~~dadl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~  293 (474)
T cd07130         215 VPLVSFTGSTAVGRQVGQAVA-ARFGRSLLELGGNNAIIVMEDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESIYDE  293 (474)
T ss_pred             CCEEEEECchHHHHHHHHHHH-hcCCCEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEcHhHHHH
Confidence            999999999999999999888 5899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHH
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++|+++++++++|||.++++++||+++..+++++.++|++++.+|+++++||...+..|+|+.|||+.++.+ |.++.
T Consensus       294 f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~~~~-~~i~~  372 (474)
T cd07130         294 VLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPTIVEGLSD-APIVK  372 (474)
T ss_pred             HHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccEEEecCCC-CHHHh
Confidence            99999999999999999999999999999999999999999999999999999986555689999999987766 89999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccc--cEeeeEEeeCCH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQG--LRAGTLIRFSSI  403 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~--~~~G~V~vN~~~  403 (442)
                      +|+||||+++.+|++++|+++++|+.++||+++|||+|.+++.+++++  +.+|.|++|...
T Consensus       373 eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~iN~~~  434 (474)
T cd07130         373 EETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVNVNIGT  434 (474)
T ss_pred             CCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEEEcCCC
Confidence            999999999999999999999999999999999999999999999877  899999999754

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=100.00  E-value=6.1e-72  Score=573.56  Aligned_cols=372  Identities=47%  Similarity=0.826  Sum_probs=342.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .|..+++.......+.++.+++++++|+|||+.+++..|+..+++.+++++.++.+..++..+...+...+++++|+|||
T Consensus        61 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~i~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV  140 (475)
T cd07117          61 ERANILNKIADIIDENKELLAMVETLDNGKPIRETRAVDIPLAADHFRYFAGVIRAEEGSANMIDEDTLSIVLREPIGVV  140 (475)
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCceeEEEEeecceE
Confidence            44455555555555557778999999999999999856999999999999987766555433322344568999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|+++|++ +.++.|+.||+++.|.
T Consensus       141 ~~I~PwN~Pl~~~~~~i~~AL~aGN~VvlKPs~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~~l~~~~~v~~v~  219 (475)
T cd07117         141 GQIIPWNFPFLMAAWKLAPALAAGNTVVIKPSSTTSLSLLELAKIIQDV-LPKGVVNIVTGKGSKSGEYLLNHPGLDKLA  219 (475)
T ss_pred             EEECCCccHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHh-CCcCcEEEEecCcHHHHHHHhcCCCCCEEE
Confidence            9999999999999999999999999999999999999999999999985 9999999999976 7889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       220 fTGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l  298 (475)
T cd07117         220 FTGSTEVGRDVAIAAA-KKLIPATLELGGKSANIIFDDANWDKALEGAQLGILFNQGQVCCAGSRIFVQEGIYDEFVAKL  298 (475)
T ss_pred             EECcHHHHHHHHHHHh-ccCCcEEEeCCCCCeEEECCCCChHHHHHHHHHHHhhccCCCCCCCeEEEEeHHHHHHHHHHH
Confidence            9999999999999888 689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHHH
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      .+.++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||....    +.|+|++|||+.++.+++.++++
T Consensus       299 ~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~e  378 (475)
T cd07117         299 KEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENGLDKGFFIEPTLIVNVTNDMRVAQE  378 (475)
T ss_pred             HHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCeEEeeEEeecCCCCChhhhC
Confidence            99999999999999999999999999999999999999999999999997643    36899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+||||+++..|++.+|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus       379 E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~  437 (475)
T cd07117         379 EIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVWVNTYN  437 (475)
T ss_pred             CCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999854

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=100.00  E-value=5.3e-72  Score=575.15  Aligned_cols=372  Identities=45%  Similarity=0.792  Sum_probs=344.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..+++.......++++.+++++++|+|||+.++...|+..+++.+++++.+++...+...+.+.+...+..++|+|||
T Consensus        61 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV  140 (480)
T cd07559          61 ERANILNKIADRIEENLELLAVAETLDNGKPIRETLAADIPLAIDHFRYFAGVIRAQEGSLSEIDEDTLSYHFHEPLGVV  140 (480)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEeccceE
Confidence            44555555555555567778999999999999999866999999999999988876655443333455678999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++ +.++.|+.||+++.|.
T Consensus       141 ~~I~PwN~P~~~~~~~i~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~~-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~  219 (480)
T cd07559         141 GQIIPWNFPLLMAAWKLAPALAAGNTVVLKPASQTPLSILVLMELIGDL-LPKGVVNVVTGFGSEAGKPLASHPRIAKLA  219 (480)
T ss_pred             EEECCCchHHHHHHHHHHHHHHcCCEEEEECchhhhHHHHHHHHHHHHh-CCcCeEEEEecCchHHHHHHhcCCCCCEEE
Confidence            9999999999999999999999999999999999999999999999996 9999999999976 8899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCC-----CHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA-----DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~da-----d~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      ||||+.+|+.|++.++ .+++|+++|+|||||+||++||     |++.|++.+++++|.|+||.|++++|||||++++|+
T Consensus       220 fTGs~~~g~~i~~~aa-~~~~p~~lElGGk~p~iV~~dA~~~~~Dl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~  298 (480)
T cd07559         220 FTGSTTVGRLIMQYAA-ENLIPVTLELGGKSPNIFFDDAMDADDDFDDKAEEGQLGFAFNQGEVCTCPSRALVQESIYDE  298 (480)
T ss_pred             EECcHHHHHHHHHHHh-ccCCcEEeccCCCCeEEEcCCccccccCHHHHHHHHHHHHHhhCCCCCCCCeEEEEcHHHHHH
Confidence            9999999999999988 5899999999999999999999     999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchh
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDM  339 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~  339 (442)
                      |+++|+++++++++|+|+|+++++||++++.+++++.++|++++.+|+++++||.+.+    ..|+|+.||++.++.+++
T Consensus       299 f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~  378 (480)
T cd07559         299 FIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDKGYFYEPTLIKGGNNDM  378 (480)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCCCcEECeEEEeCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999997643    468999999999999999


Q ss_pred             HHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         340 KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       340 ~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      .++++|+||||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||...
T Consensus       379 ~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~iN~~~  442 (480)
T cd07559         379 RIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVWVNCYH  442 (480)
T ss_pred             cHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999754

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=100.00  E-value=7.7e-72  Score=571.02  Aligned_cols=374  Identities=43%  Similarity=0.751  Sum_probs=347.0

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcceEEEeeccc
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVG  107 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~G  107 (442)
                      .++.++++.......+.++.+++++++|+|||+.+++. |+..+++.+++++.++++..+...+. ..+...++.++|+|
T Consensus        43 ~~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  121 (454)
T cd07118          43 AERAAVLLKVADLIRARRERLALIETLESGKPISQARG-EIEGAADLWRYAASLARTLHGDSYNNLGDDMLGLVLREPIG  121 (454)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeeEEeecce
Confidence            35556666665655666888899999999999999998 99999999999998776665543321 23445688999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK  186 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~  186 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++ +.++.|+.||+++.
T Consensus       122 vV~~I~p~N~P~~~~~~~i~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aG~P~g~~~~v~g~~~~~~~~L~~~~~v~~  201 (454)
T cd07118         122 VVGIITPWNFPFLILSQKLPFALAAGCTVVVKPSEFTSGTTLMLAELLIEAGLPAGVVNIVTGYGATVGQAMTEHPDVDM  201 (454)
T ss_pred             EEEEECCCCcHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCCCccceEEEecCCchHHHHHhcCCCCCE
Confidence            99999999999999999999999999999999999999999999999999999999999999977 78999999999999


Q ss_pred             EeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHH
Q psy5844         187 VAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVA  266 (442)
Q Consensus       187 v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~  266 (442)
                      |.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|++
T Consensus       202 v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~  280 (454)
T cd07118         202 VSFTGSTRVGKAIAAAAA-RNLKKVSLELGGKNPQIVFADADLDAAADAVVFGVYFNAGECCNSGSRLLVHESIADAFVA  280 (454)
T ss_pred             EEEECcHHHHHHHHHHHH-hcCCcEEeccCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHH
Confidence            999999999999999988 5899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-CCCcccccceeccCcchhHHHHHh
Q psy5844         267 RSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       267 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      +|+++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||...+ ..|+|++|||+.++.+++.++++|
T Consensus       281 ~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE  360 (454)
T cd07118         281 AVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGLFYQPTIFTDVTPDMAIAREE  360 (454)
T ss_pred             HHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCeEEeCEEEeCCCCCCHHHhCC
Confidence            9999999999999999999999999999999999999999999999999997654 468999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +|||+++++.|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+...
T Consensus       361 ~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~  419 (454)
T cd07118         361 IFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVWVNTFLD  419 (454)
T ss_pred             CCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999998754

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=100.00  E-value=8.5e-72  Score=575.51  Aligned_cols=372  Identities=47%  Similarity=0.780  Sum_probs=345.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      +|.++++.......+.++.+++++++|+|||..+++. |+..+++.+++++.++++..++..+.+.+...+++++|+|||
T Consensus        60 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV  138 (482)
T cd07119          60 ERAALLFRIADKIREDAEELARLETLNTGKTLRESEI-DIDDVANCFRYYAGLATKETGEVYDVPPHVISRTVREPVGVC  138 (482)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceEEEEEeeeeeE
Confidence            3445555555555566788899999999999999998 999999999999988876655544333455678999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|+++++++++ +.++.|+.||.++.|.
T Consensus       139 ~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~l~~~~~v~~V~  218 (482)
T cd07119         139 GLITPWNYPLLQAAWKLAPALAAGNTVVIKPSEVTPLTTIALFELIEEAGLPAGVVNLVTGSGATVGAELAESPDVDLVS  218 (482)
T ss_pred             EEEcCCchHHHHHHHHHHHHHhcCCEEEEECCccccHHHHHHHHHHHHcCCCcCcEEEEecCcHHHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999877 6889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       219 fTGs~~~g~~i~~~aa-~~~~~~~lElGGkn~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l  297 (482)
T cd07119         219 FTGGTATGRSIMRAAA-GNVKKVALELGGKNPNIVFADADFETAVDQALNGVFFNAGQVCSAGSRLLVEESIHDKFVAAL  297 (482)
T ss_pred             EECcHHHHHHHHHHHH-hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHH
Confidence            9999999999999888 588999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHHH
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++++++++|+|.++++++||+++..+++++.+++++++++|+++++||....    ..|+|+.|||+.++.+++.++++
T Consensus       298 ~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~e  377 (482)
T cd07119         298 AERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAKGYFVEPTIFDDVDRTMRIVQE  377 (482)
T ss_pred             HHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCceECCEEEecCCCCChHhhC
Confidence            99999999999999999999999999999999999999999999999997542    25899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+||||++++.|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+..
T Consensus       378 E~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~  436 (482)
T cd07119         378 EIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVWINDYH  436 (482)
T ss_pred             CCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999863

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=100.00  E-value=4.1e-72  Score=574.51  Aligned_cols=372  Identities=47%  Similarity=0.801  Sum_probs=346.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      ++.++++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.++++..++..+.+.+...+++++|+|||
T Consensus        42 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVV  120 (457)
T cd07090          42 ERGRILRKAADLLRERNDEIARLETIDNGKPIEEARV-DIDSSADCLEYYAGLAPTLSGEHVPLPGGSFAYTRREPLGVC  120 (457)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeeccCCCceEEEEEeecceE
Confidence            4555556555555556788899999999999999998 999999999999988877656554444466778999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++++++.++.|+.||+++.|.|
T Consensus       121 ~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~~~~~~~l~~~~~~aGlP~g~~~~v~g~~~~~~~l~~~~~v~~v~f  200 (457)
T cd07090         121 AGIGAWNYPIQIASWKSAPALACGNAMVYKPSPFTPLTALLLAEILTEAGLPDGVFNVVQGGGETGQLLCEHPDVAKVSF  200 (457)
T ss_pred             EEECCCccHHHHHHHHHHHHHhcCCeeeecCCCcCcHHHHHHHHHHHHcCCCcccEEEEeCChhhHHHHhcCCCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999986688899999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG  269 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~  269 (442)
                      |||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.
T Consensus       201 TGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l~  279 (457)
T cd07090         201 TGSVPTGKKVMSAAA-KGIKHVTLELGGKSPLIIFDDADLENAVNGAMMANFLSQGQVCSNGTRVFVQRSIKDEFTERLV  279 (457)
T ss_pred             ECcHHHHHHHHHHHh-ccCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHHHH
Confidence            999999999999988 5899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-----CCCcccccceeccCcchhHHHHH
Q psy5844         270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-----DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-----~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      ++++++++|+|.++++++||+++..+++++.++|++++.+|+++++||....     ++|+|+.|||+.++.+++.++.+
T Consensus       280 ~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~  359 (457)
T cd07090         280 ERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGFYVSPCVLTDCTDDMTIVRE  359 (457)
T ss_pred             HHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCeeECCEEEecCCCCChHHhC
Confidence            9999999999999999999999999999999999999999999999997532     35889999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+||||++++.|++.+|+|+++|+.+++|+++|||+|.+.+.++++++++|.|++|+..
T Consensus       360 E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~  418 (457)
T cd07090         360 EIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCWINTYN  418 (457)
T ss_pred             CCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999854

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=1e-71  Score=570.20  Aligned_cols=371  Identities=32%  Similarity=0.502  Sum_probs=344.3

Q ss_pred             CCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-----CCcceEEE
Q psy5844          28 PITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-----GDFFAYTR  102 (442)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  102 (442)
                      ..++.+++++......++++.+++++++|+|||+.++.. |+.++++.+++++..+++..+...+..     .+...+.+
T Consensus        43 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  121 (455)
T cd07148          43 AHERIAILERLADLMEERADELALLIAREGGKPLVDAKV-EVTRAIDGVELAADELGQLGGREIPMGLTPASAGRIAFTT  121 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEE
Confidence            345566777776666677889999999999999999998 999999999999988876655433221     23456899


Q ss_pred             eeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCC
Q psy5844         103 HEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHP  182 (442)
Q Consensus       103 ~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~  182 (442)
                      ++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++++.+.++.|+.||
T Consensus       122 ~~P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~  201 (455)
T cd07148         122 REPIGVVVAISAFNHPLNLIVHQVAPAIAAGCPVIVKPALATPLSCLAFVDLLHEAGLPEGWCQAVPCENAVAEKLVTDP  201 (455)
T ss_pred             EecceEEEEECCCCcHHHHHHHHHHHHHHcCCEEEeeCCCcccHHHHHHHHHHHHcCCCcCcEEEEeCChHHHHHHhcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999998667889999999


Q ss_pred             CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         183 GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       183 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      +++.|.||||+++|+.|++.++ . .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|
T Consensus       202 ~v~~v~fTGs~~~G~~i~~~aa-~-~~~~~lElGG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d  279 (455)
T cd07148         202 RVAFFSFIGSARVGWMLRSKLA-P-GTRCALEHGGAAPVIVDRSADLDAMIPPLVKGGFYHAGQVCVSVQRVFVPAEIAD  279 (455)
T ss_pred             CCCEEEEECCHHHHHHHHHHhh-c-CCcEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCccCCeEEEEcHhHHH
Confidence            9999999999999999999887 3 5899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +|+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||...  .++|+.|||+.++.+++.++
T Consensus       280 ~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~--~~~~~~Ptvl~~~~~~~~~~  357 (455)
T cd07148         280 DFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRL--SDTTYAPTVLLDPPRDAKVS  357 (455)
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccC--CCCeEcCEEEeCCCCCCHHH
Confidence            9999999999999999999999999999999999999999999999999999998764  46899999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ++|+||||++++.|++++|+++++|+..++|+++|||+|.+.+.++++++++|.|+||++.
T Consensus       358 ~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~iN~~~  418 (455)
T cd07148         358 TQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVMVNDHT  418 (455)
T ss_pred             hCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999999865

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=100.00  E-value=7.1e-72  Score=574.77  Aligned_cols=373  Identities=37%  Similarity=0.568  Sum_probs=344.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..++.+.+...+.. .+...+..++|+||
T Consensus        58 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  136 (478)
T cd07086          58 RRGEIVRQIGEALRKKKEALGRLVSLEMGKILPEGLG-EVQEMIDICDYAVGLSRMLYGLTIPSERPGHRLMEQWNPLGV  136 (478)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEeccee
Confidence            4445555554544555778899999999999999998 999999999999988877655443322 34456889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHh----CCCCCcEEeecCCccchhhhhcCCCc
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVVNIVPGYGDAGAALVQHPGV  184 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~a----glp~~~~~~v~~~~~~~~~l~~~~~v  184 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++    |+|+|++++++|+++.+..|..||++
T Consensus       137 v~~I~pwN~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~al~~~glP~gvv~~v~g~~~~~~~L~~~~~v  216 (478)
T cd07086         137 VGVITAFNFPVAVPGWNAAIALVCGNTVVWKPSETTPLTAIAVTKILAEVLEKNGLPPGVVNLVTGGGDGGELLVHDPRV  216 (478)
T ss_pred             EEEECCCCcHHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhhhccCCCccceEEEecCchhHHHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999999    99999999999876788889999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      +.|.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus       217 d~v~fTGs~~~g~~i~~~aa-~~~~~~~lElGG~~p~iV~~dAdl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  295 (478)
T cd07086         217 PLVSFTGSTEVGRRVGETVA-RRFGRVLLELGGNNAIIVMDDADLDLAVRAVLFAAVGTAGQRCTTTRRLIVHESVYDEF  295 (478)
T ss_pred             CEEEEECcHHHHHHHHHHHh-ccCCcEEeecCCCCcEEEcCCCCHHHHHHHHHHHHHhccCCCCcCCeEEEEcHHHHHHH
Confidence            99999999999999999888 58999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCC--CCcccccceeccCcchhHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD--KGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~--~g~~v~pti~~~~~~~~~~~  342 (442)
                      +++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||.....  .|+|+.|||+.++.+++.++
T Consensus       296 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~  375 (478)
T cd07086         296 LERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVEPTIVTGVTDDARIV  375 (478)
T ss_pred             HHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEecCCCCCChhh
Confidence            9999999999999999999999999999999999999999999999999999976433  58899999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccc--cEeeeEEeeCCHH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQG--LRAGTLIRFSSIE  404 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~--~~~G~V~vN~~~~  404 (442)
                      .+|+||||++++.|++++|+++++|+.++||+++|||+|.+.+.+++++  +++|.|++|+...
T Consensus       376 ~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~iN~~~~  439 (478)
T cd07086         376 QEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVNVNIPTS  439 (478)
T ss_pred             cCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999  9999999998754

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=100.00  E-value=1.2e-71  Score=570.92  Aligned_cols=373  Identities=47%  Similarity=0.772  Sum_probs=346.4

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcC---cccccC-CCcceEEEee
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG---KTIPIN-GDFFAYTRHE  104 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~---~~~~~~-~~~~~~~~~~  104 (442)
                      .++.++++.......++++.+++++++|+|||+.++.. |+..+++.+++++..++++.+   ...+.+ .+...+++++
T Consensus        41 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  119 (456)
T cd07110          41 AERAKYLRAIAEGVRERREELAELEARDNGKPLDEAAW-DVDDVAGCFEYYADLAEQLDAKAERAVPLPSEDFKARVRRE  119 (456)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhccCCccccCCCCCceeEEEEe
Confidence            35566666665656677888999999999999999998 999999999999988876532   222222 3556789999


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCC
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPG  183 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~  183 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.||+
T Consensus       120 P~GVV~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~L~~~~~  199 (456)
T cd07110         120 PVGVVGLITPWNFPLLMAAWKVAPALAAGCTVVLKPSELTSLTELELAEIAAEAGLPPGVLNVVTGTGDEAGAPLAAHPG  199 (456)
T ss_pred             cceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECcccchHHHHHHHHHHHHcCCCCCcEEEEecCchHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999976 78899999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      ++.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+
T Consensus       200 v~~V~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~  278 (456)
T cd07110         200 IDKISFTGSTATGSQVMQAAA-QDIKPVSLELGGKSPIIVFDDADLEKAVEWAMFGCFWNNGQICSATSRLLVHESIADA  278 (456)
T ss_pred             CCEEEEECCHHHHHHHHHHHh-hcCCeEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHH
Confidence            999999999999999999988 5899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccCcchhHH
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~~~~~~~  341 (442)
                      |+++|+++++++++|+|.++++++||++++.+++++++++++++.+|+++++||....  +.++|+.||++.++++++.+
T Consensus       279 f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~i  358 (456)
T cd07110         279 FLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFIAPTVFADVPTDSRI  358 (456)
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcCCCEEEecCCCCChH
Confidence            9999999999999999999999999999999999999999999999999999997643  46899999999999999999


Q ss_pred             HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +.+|+||||++++.|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       359 ~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~  420 (456)
T cd07110         359 WREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVWINCSQ  420 (456)
T ss_pred             hhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999999864

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=100.00  E-value=1.3e-71  Score=575.97  Aligned_cols=373  Identities=34%  Similarity=0.550  Sum_probs=344.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gv  108 (442)
                      .|.+++.+......+.++.+++++++|+|||+.++.. |+..+++.+++++..+++..+...+. ..+...+++++|+||
T Consensus        92 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  170 (511)
T TIGR01237        92 ERAGILRKAAAIMERRRHELNALICLEVGKIIPEADA-EVAEAIDFCEYYAREMERLAGQGVNLDIEGETNRYFYQPRGV  170 (511)
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeccee
Confidence            4555666665555566778899999999999999998 99999999999998887765543322 245667899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++ +.++.|+.||.++.|
T Consensus       171 V~~I~P~N~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V  250 (511)
T TIGR01237       171 AVVISPWNFPMAIAVGMTVAPIVTGNCVVLKPAETSTVIAAKIVEILIEAGLPPGVFQFVPGKGSEVGSYLVNHPKTHLI  250 (511)
T ss_pred             EEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEccCCCchhHHHHhcCCCCCeE
Confidence            9999999999999999999999999999999999999999999999999999999999999976 889999999999999


Q ss_pred             eecCCHHHHHHHHhhccC-----CCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         188 AFTGSTEVGKLVQQGSGA-----SNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      .||||+.+|+.|++.+++     ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|
T Consensus       251 ~fTGs~~~G~~i~~~aa~~~~~~~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d  330 (511)
T TIGR01237       251 TFTGSREVGCRIYEDAAKVQPGQKHLKRVIAEMGGKDAIIVDESADIEQAVAGAVYSAFGFTGQKCSACSRVVVLSPVYD  330 (511)
T ss_pred             EEECchHHHHHHHHHHhcccccccccceeEeccCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccceEEEEehhHHH
Confidence            999999999999988763     378999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +|+++|.++++++++|+|.++++++||++++.+++++.+++++++.+| ++++||......|+|+.|||+.++.+++.++
T Consensus       331 ~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g-~~l~gg~~~~~~g~~~~Ptvl~~~~~~~~i~  409 (511)
T TIGR01237       331 AVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEG-ELAIGGCDAPSEGYFIGPTIFKDVDRHARLA  409 (511)
T ss_pred             HHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCC-cEEECCccCCCCCeEEcCEEEeCCCCCChHh
Confidence            999999999999999999999999999999999999999999999888 7888886544468999999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ++|+||||+++.+|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       410 ~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~  471 (511)
T TIGR01237       410 QEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLYFNRTIT  471 (511)
T ss_pred             hCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999999998754

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=100.00  E-value=1.4e-71  Score=570.01  Aligned_cols=372  Identities=42%  Similarity=0.722  Sum_probs=344.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.++++.......+.++.+++++++|+|||+.++.. |+..+++.+++++...+...++..+.+.+...+..++|+|||
T Consensus        42 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  120 (456)
T cd07107          42 ERARMLRELATRLREHAEELALIDALDCGNPVSAMLG-DVMVAAALLDYFAGLVTELKGETIPVGGRNLHYTLREPYGVV  120 (456)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEecceEE
Confidence            4455555555555566788899999999999999987 999999999999987776666544443455678999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|++ +.++.|+.||.++.|.
T Consensus       121 ~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~~-lP~gvv~~v~g~~~~~~~~l~~~~~i~~v~  199 (456)
T cd07107         121 ARIVAFNHPLMFAAAKIAAPLAAGNTVVVKPPEQAPLSALRLAELAREV-LPPGVFNILPGDGATAGAALVRHPDVKRIA  199 (456)
T ss_pred             EEECCcccHHHHHHHHHhHHHHcCCEEEEeCCCCChHHHHHHHHHHHHh-CCcCcEEEEeCCCchHHHHHhcCCCCCEEE
Confidence            9999999999999999999999999999999999999999999999995 9999999999877 6889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHh-hccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGL-FFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~-~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++ |.|+||.|++++|||||++++|+|+++
T Consensus       200 fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dadl~~Aa~~i~~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~  278 (456)
T cd07107         200 LIGSVPTGRAIMRAAA-EGIKHVTLELGGKNALIVFPDADPEAAADAAVAGMNFTWCGQSCGSTSRLFVHESIYDEVLAR  278 (456)
T ss_pred             EECcHHHHHHHHHHHh-cCCCeEEEECCCCCeEEECCCCCHHHHHHHHHHhchhhcCCCCCcCCcEEEEcHHHHHHHHHH
Confidence            9999999999999988 58999999999999999999999999999999995 999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHH
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++++++++|+|.++++++||+++..+++++.++|++++.+|+++++||....    ..|+|+.|||+.++.+++.+++
T Consensus       279 l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~  358 (456)
T cd07107         279 VVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPALEGGFYVEPTVFADVTPGMRIAR  358 (456)
T ss_pred             HHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEECCCCCChhhh
Confidence            999999999999999999999999999999999999999999999999996532    3589999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +|+||||++++.|++.+|+++++|+.++||+++|||+|.+++.++++++++|.|++|+...
T Consensus       359 eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~iN~~~~  419 (456)
T cd07107         359 EEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVWINGSSR  419 (456)
T ss_pred             CCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999999998763

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=100.00  E-value=1.4e-71  Score=569.73  Aligned_cols=378  Identities=41%  Similarity=0.646  Sum_probs=347.4

Q ss_pred             ccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcc-cccC----CCcc
Q psy5844          24 AVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT-IPIN----GDFF   98 (442)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~----~~~~   98 (442)
                      +++. ..|.+++++......+.++.+++++++|+|||+.++...|+..+++.+++++..+++..++. .+..    .+..
T Consensus        38 ~~~~-~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  116 (459)
T cd07089          38 STDA-EERARCLRQLHEALEARKEELRALLVAEVGAPVMTARAMQVDGPIGHLRYFADLADSFPWEFDLPVPALRGGPGR  116 (459)
T ss_pred             cCCH-HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCcccccCCCce
Confidence            4443 34556666665555666888999999999999988765599999999999998887654443 1211    2456


Q ss_pred             eEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhh
Q psy5844          99 AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAA  177 (442)
Q Consensus        99 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~  177 (442)
                      .+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.+..
T Consensus       117 ~~~~~~P~GVV~~I~P~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~~~~aglP~g~~~~v~g~~~~~~~~  196 (459)
T cd07089         117 RVVRREPVGVVAAITPWNFPFFLNLAKLAPALAAGNTVVLKPAPDTPLSALLLGEIIAETDLPAGVVNVVTGSDNAVGEA  196 (459)
T ss_pred             eEEEEeeccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCccceEEEecCcHHHHHH
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999977 68899


Q ss_pred             hhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEc
Q psy5844         178 LVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQ  257 (442)
Q Consensus       178 l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~  257 (442)
                      |+.||+++.|.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||
T Consensus       197 l~~~~~~~~v~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~n~~iV~~dadl~~aa~~i~~~~~~~sGQ~C~a~~~v~V~  275 (459)
T cd07089         197 LTTDPRVDMVSFTGSTAVGRRIMAQAA-ATLKRVLLELGGKSANIVLDDADLAAAAPAAVGVCMHNAGQGCALTTRLLVP  275 (459)
T ss_pred             HhcCCCCCEEEEECcHHHHHHHHHHHH-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCcccCCeEEEEc
Confidence            999999999999999999999999988 5889999999999999999999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccC
Q psy5844         258 DTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANV  335 (442)
Q Consensus       258 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~  335 (442)
                      ++++++|+++|+++++++++|+|.++++++||+++..+.+++.+++++++.+|+++++||....  +.|+|+.|||+.++
T Consensus       276 ~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~Ptvl~~~  355 (459)
T cd07089         276 RSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVEPTLFADV  355 (459)
T ss_pred             HHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEECCEEEEcC
Confidence            9999999999999999999999999999999999999999999999999999999999997643  36899999999999


Q ss_pred             cchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         336 RDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       336 ~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      .+++.++.+|+||||+++..|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|++|+..
T Consensus       356 ~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~iN~~~  423 (459)
T cd07089         356 DNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVGINGGG  423 (459)
T ss_pred             CCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999876

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=100.00  E-value=6.4e-72  Score=574.28  Aligned_cols=373  Identities=47%  Similarity=0.765  Sum_probs=344.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.+++++......+.++.+++++++|+|||+.++...|+..+++.+++++..+++..+...+.+.....+..++|+|||
T Consensus        58 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  137 (467)
T TIGR01804        58 ERGRILRRIAELIRERNEELAKLETLDTGKTLEETSVADMDDIADVFEFFAGLADKDGGEIIPLPIPSFSYTIREPLGVC  137 (467)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhCCccccCCCCceEEEEEeeeeEE
Confidence            45555565555555667888999999999999999434999999999999988877655433332224468999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|+++++++++ +.++.|+.||.++.|.
T Consensus       138 ~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~v~~V~  217 (467)
T TIGR01804       138 VGIGAWNYPLQIASWKIAPALAAGNAMVFKPSEITPLTALKVAELMEEAGLPDGVFNVVLGKGAEVGEPLVNHKDVAKVS  217 (467)
T ss_pred             EEECCCchHHHHHHHHHHHHHhcCCEEEeeCCccCcHHHHHHHHHHHHcCcCcCcEEEEeCCcHHHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999975 8899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       218 fTGs~~~g~~v~~~a~-~~l~~~~lElGG~~~~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l  296 (467)
T TIGR01804       218 FTGGVPTGKKIMAAAA-DHLKHVTMELGGKSPLIVFDDADLELAVDQAMNGNFFSAGQVCSNGTRVFVHNKIKEKFEARL  296 (467)
T ss_pred             EECcHHHHHHHHHHHH-hcCCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCCEEEEcHHHHHHHHHHH
Confidence            9999999999999888 588999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHHH
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++++++++|+|.++++++||++++.+.+++.+++++++.+|+++++||....    ..|+|+.|||+.++.+++.++++
T Consensus       297 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~e  376 (467)
T TIGR01804       297 VERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQNGFFIEPTVFTDCTDDMTIVRE  376 (467)
T ss_pred             HHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCeEEeeEEEeCCCCCChHHhC
Confidence            99999999999999999999999999999999999999999999999997532    25889999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+|||+++++.|++.+|+++++|+.++||+++|||+|..++.++++++++|.|+||+..
T Consensus       377 E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~iN~~~  435 (467)
T TIGR01804       377 EIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVWINDFH  435 (467)
T ss_pred             CCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999865

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=100.00  E-value=1.5e-71  Score=569.80  Aligned_cols=373  Identities=51%  Similarity=0.897  Sum_probs=347.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..+++.......+.++.+++++++|+|||..++...|+..+++.+++++.++++..+...+...+...+.+++|+|||
T Consensus        42 ~R~~~l~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~i~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~Gvv  121 (453)
T cd07115          42 ERGRILWRLAELILANADELARLESLDTGKPIRAARRLDVPRAADTFRYYAGWADKIEGEVIPVRGPFLNYTVREPVGVV  121 (453)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEecceeEE
Confidence            44555555555555678889999999999999999855999999999999998877766544433455678999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|++++++++|++ +.++.|+.||+++.|+
T Consensus       122 ~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~~~~~aGlP~~~~~~v~g~~~~~~~~l~~~~~id~v~  201 (453)
T cd07115         122 GAIVPWNFPLMFAAWKVAPALAAGNTVVLKPAELTPLSALRIAELMAEAGFPAGVLNVVTGFGEVAGAALVEHPDVDKIT  201 (453)
T ss_pred             EEEcCCCCHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHhcCcCchheEEEecCchhHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999976 7889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|
T Consensus       202 fTGs~~~g~~v~~~aa-~~~~~~~lElgG~~p~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l  280 (453)
T cd07115         202 FTGSTAVGRKIMQGAA-GNLKRVSLELGGKSANIVFADADLDAAVRAAATGIFYNQGQMCTAGSRLLVHESIYDEFLERF  280 (453)
T ss_pred             EECcHHHHHHHHHHHh-hcCCeEEEecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCCCCeEEEEcHHHHHHHHHHH
Confidence            9999999999999888 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      +++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||......++|++|||+.++.+++.++.+|+||
T Consensus       281 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~Fg  360 (453)
T cd07115         281 TSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGFFVEPTIFAAVPPEMRIAQEEIFG  360 (453)
T ss_pred             HHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceECCEEEecCCCCChHhhCCCcC
Confidence            99999999999999999999999999999999999999999999999987654468999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||++++.|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       361 Pvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~iN~~~  415 (453)
T cd07115         361 PVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVWINTYN  415 (453)
T ss_pred             ceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999754

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=100.00  E-value=1.1e-71  Score=572.00  Aligned_cols=370  Identities=39%  Similarity=0.631  Sum_probs=341.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+.+++++......+.++.+++++++|+|||+.++.. |+..+++.+++++.+.++..+...+.. .+...+++++|+||
T Consensus        55 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  133 (465)
T cd07151          55 ERAEILEKAAQILEERRDEIVEWLIRESGSTRIKANI-EWGAAMAITREAATFPLRMEGRILPSDVPGKENRVYREPLGV  133 (465)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCccccCCCCCceeEEEEecceE
Confidence            4445555554444445677899999999999999998 999999999999988766655443322 35567889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHH-HHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA-LAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK  186 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~-~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~  186 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++ ..+.++|.++|+|+|++|+++|++ +.+..|+.||.++.
T Consensus       134 v~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aG~P~gvv~~v~g~~~~~~~~l~~~~~v~~  213 (465)
T cd07151         134 VGVISPWNFPLHLSMRSVAPALALGNAVVLKPASDTPITGGLLLAKIFEEAGLPKGVLNVVVGAGSEIGDAFVEHPVPRL  213 (465)
T ss_pred             EEEECCCChHHHHHHHHHHHHHHcCCEEEEECCCCCcHhHHHHHHHHHHHcCcCccceEEEecCchhhHHHHhcCCCCCE
Confidence            9999999999999999999999999999999999999996 689999999999999999999876 78899999999999


Q ss_pred             EeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHH
Q psy5844         187 VAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVA  266 (442)
Q Consensus       187 v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~  266 (442)
                      |.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus       214 v~fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~  292 (465)
T cd07151         214 ISFTGSTPVGRHIGELAG-RHLKKVALELGGNNPFVVLEDADIDAAVNAAVFGKFLHQGQICMAINRIIVHEDVYDEFVE  292 (465)
T ss_pred             EEEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHHHHHHHHH
Confidence            999999999999999888 5899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844         267 RSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       267 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      +|.+.++++++|+|.++++++||++++.+++++.+++++++.+|+++++||..   .|+|++|||+.++.+++.++++|+
T Consensus       293 ~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~  369 (465)
T cd07151         293 KFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEA---EGNVLEPTVLSDVTNDMEIAREEI  369 (465)
T ss_pred             HHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCc---CCEEEccEEEeCCCCCCchhhCcC
Confidence            99999999999999999999999999999999999999999999999999864   578999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||||+.++.|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       370 FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~  427 (465)
T cd07151         370 FGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTHINDQPV  427 (465)
T ss_pred             cCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999998764

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=100.00  E-value=1.1e-71  Score=576.60  Aligned_cols=380  Identities=28%  Similarity=0.403  Sum_probs=342.4

Q ss_pred             ccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc-ccCCCcceEEE
Q psy5844          24 AVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PINGDFFAYTR  102 (442)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~  102 (442)
                      .++...|...+.+.+..+..+.++.+++++++|+|||+.+++..++..+++.+++++.++++..+... ....+..+++.
T Consensus        87 ~~~~~~R~~~L~k~a~~l~~~~~~~la~~~~~e~GK~~~~a~~e~v~~~i~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~  166 (533)
T TIGR01236        87 ALPFYDRAAIFLKAADLLSGPYREEILAATMLGQSKNVYQAEIDAVAELIDFFRFNVKYARELYEQQPSESAPGEWNRTD  166 (533)
T ss_pred             hCCHHHHHHHHHHHHHHHHhhcHHHHHHHHHHHcCCcHHHHhHhHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEE
Confidence            33433344444444444544678899999999999999999883499999999999998877655433 11245567899


Q ss_pred             eecc-ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhc
Q psy5844         103 HEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQ  180 (442)
Q Consensus       103 ~~P~-Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~  180 (442)
                      ++|+ |||++|+|||||+....+++++|| +||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++ +.++.|+.
T Consensus       167 ~~P~~GVv~~I~PwN~P~~~~~~~~a~AL-aGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~g~~Lv~  245 (533)
T TIGR01236       167 YRPLEGFVYAISPFNFTAIAGNLPGAPAL-MGNTVIWKPSITATLSNYLTMRILEEAGLPPGVINFVPGDGFAVSDVVLA  245 (533)
T ss_pred             EecCCCEEEEEeCCchHHHHHHHHHHHHH-hCCeEEEECCCcCCHHHHHHHHHHHhcCCCCCcEEEEecCcHHHHHHHhc
Confidence            9999 999999999999999999999999 89999999999999999999999999999999999999976 88999999


Q ss_pred             CCCccEEeecCCHHHHHHHHhhccCCCCc------eeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEE
Q psy5844         181 HPGVDKVAFTGSTEVGKLVQQGSGASNLK------RTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRT  254 (442)
Q Consensus       181 ~~~v~~v~ftGs~~~~~~i~~~~~~~~~~------~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v  254 (442)
                      ||+++.|.||||+.+|+.|++.++ .+++      ++++|+|||||+||++|||++.|++.+++++|.|+||.|++++||
T Consensus       246 ~p~v~~V~FTGS~~~G~~i~~~aa-~~l~~~~~~~~v~lElGGknp~IV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv  324 (533)
T TIGR01236       246 DPRLAGIHFTGSTATFKHLWKWVA-SNLDRYHNFPRIVGETGGKDFHVVHPSADIDHAVTATIRGAFEYQGQKCSAASRL  324 (533)
T ss_pred             CCCcCEEEEECCHHHHHHHHHHHH-hhccccccCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCCCcCCeeE
Confidence            999999999999999999999888 4665      499999999999999999999999999999999999999999999


Q ss_pred             EEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcC--CEEEeCCcccCCCCccccccee
Q psy5844         255 FVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQG--AQLVAGGGRAGDKGFYVQPTVF  332 (442)
Q Consensus       255 ~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G--a~~~~gg~~~~~~g~~v~pti~  332 (442)
                      |||++++|+|+++|+++++++++|+|.|+++++||+++..+++++.+++++++.+|  +++++||......|+|+.|||+
T Consensus       325 ~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G~~~~PTvl  404 (533)
T TIGR01236       325 YVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEGYFVEPTVI  404 (533)
T ss_pred             EEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCCeEEeeEEE
Confidence            99999999999999999999999999999999999999999999999999999987  7999998764446899999999


Q ss_pred             ccCcchhHHHHHhhcCCcccccccCC--HHHHHHHH-hcCCCCceEEEecCCCChhhhhccccE--eeeEEeeCCHHH
Q psy5844         333 ANVRDDMKIAREEIFGPVQQLIRFSS--IEEVIERA-NNSDYGLAAAVFTKDLDKTNYVTQGLR--AGTLIRFSSIEE  405 (442)
Q Consensus       333 ~~~~~~~~~~~~e~fgPvl~v~~~~~--~~eai~~a-n~~~~gl~~~v~s~d~~~~~~~~~~~~--~G~V~vN~~~~~  405 (442)
                      .++.+++.++++|+||||++++.|++  ++|+++++ |++++||+++|||+|.+.+.+++++++  +|.|+||+....
T Consensus       405 ~~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~IN~~~~~  482 (533)
T TIGR01236       405 LSKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFYINDKPTG  482 (533)
T ss_pred             ecCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEEECCCCCC
Confidence            99999999999999999999999999  59999999 789999999999999999999999976  999999976543

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=100.00  E-value=1.1e-71  Score=569.36  Aligned_cols=370  Identities=35%  Similarity=0.615  Sum_probs=342.7

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      ++.++++.......+.++.+++++++|+|||..++.. |+..+++.+++++..++...+...+...+...+.+++|+|||
T Consensus        36 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~Gvv  114 (443)
T cd07152          36 ERAAVLRRAADLLEEHADEIADWIVRESGSIRPKAGF-EVGAAIGELHEAAGLPTQPQGEILPSAPGRLSLARRVPLGVV  114 (443)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHhHHHhCCccccccCCceeEEEEecceEE
Confidence            4455555554544566788899999999999999998 999999999999987765545443333566678999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHH-HHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA-LAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~-~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++ ..+.++|.++|+|+|++|+++|+.+.+..|+.||+++.|.
T Consensus       115 ~~i~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~~l~~~~~~ag~P~gvv~~v~g~~~~~~~l~~~~~v~~V~  194 (443)
T cd07152         115 GVISPFNFPLILAMRSVAPALALGNAVVLKPDPRTPVSGGVVIARLFEEAGLPAGVLHVLPGGADAGEALVEDPNVAMIS  194 (443)
T ss_pred             EEECCCCcHHHHHHHHHHHHHHcCCEEEEECCcccchhHHHHHHHHHHHhCcCcCcEEEecCChHHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999996 7899999999999999999998558889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++|
T Consensus       195 fTGs~~~g~~i~~~aa-~~~~~~~lElGGk~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~l  273 (443)
T cd07152         195 FTGSTAVGRKVGEAAG-RHLKKVSLELGGKNALIVLDDADLDLAASNGAWGAFLHQGQICMAAGRHLVHESVADAYTAKL  273 (443)
T ss_pred             EECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCcCCeeEEEcHHHHHHHHHHH
Confidence            9999999999999888 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      .++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||..   +|+|+.||++.++.+++.++.+|+||
T Consensus       274 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~Fg  350 (443)
T cd07152         274 AAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTY---DGLFYRPTVLSGVKPGMPAFDEEIFG  350 (443)
T ss_pred             HHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCc---CCEEEcCEEEecCCCCChhhhccccC
Confidence            999999999999999999999999999999999999999999999999864   47899999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |+++++.|++.+|+++++|+.++||+++|||+|.+++.++++++++|.|+||++..
T Consensus       351 Pvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~  406 (443)
T cd07152         351 PVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLHINDQTV  406 (443)
T ss_pred             CeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999998764

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=100.00  E-value=1.3e-71  Score=570.67  Aligned_cols=370  Identities=39%  Similarity=0.666  Sum_probs=343.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-----CCcceEEEee
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-----GDFFAYTRHE  104 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  104 (442)
                      .+.++++.......++++.+++++++|+|||+.+++. |+..+++.+++++..++...++..+.+     .+...+.+++
T Consensus        44 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (456)
T cd07145          44 KRYKILMKVAELIERRKEELAKLLTIEVGKPIKQSRV-EVERTIRLFKLAAEEAKVLRGETIPVDAYEYNERRIAFTVRE  122 (456)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCccccccCCceeEEEEe
Confidence            4455555555555566888899999999999999998 999999999999987765545433222     1345678899


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCC
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPG  183 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~  183 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.||+
T Consensus       123 P~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~ag~p~g~~~~v~g~~~~~~~~l~~~~~  202 (456)
T cd07145         123 PIGVVGAITPFNFPANLFAHKIAPAIAVGNSVVVKPSSNTPLTAIELAKILEEAGLPPGVINVVTGYGSEVGDEIVTNPK  202 (456)
T ss_pred             cceeEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCcccEEEEeCCCchHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999976 78899999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      ++.|.||||+.+|+.|.+.++ ++++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+
T Consensus       203 v~~V~fTGs~~~g~~i~~~aa-~~~~~v~lElgG~n~~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~  281 (456)
T cd07145         203 VNMISFTGSTAVGLLIASKAG-GTGKKVALELGGSDPMIVLKDADLERAVSIAVRGRFENAGQVCNAVKRILVEEEVYDK  281 (456)
T ss_pred             CCEEEEECCHHHHHHHHHHHh-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCccCeeEEEcHHHHHH
Confidence            999999999999999999988 5899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHH
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...  .|+|+.|||+.++.+++.++.
T Consensus       282 f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~--~g~~~~Ptvl~~~~~~~~i~~  359 (456)
T cd07145         282 FLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRD--EGSFFPPTVLENDTPDMIVMK  359 (456)
T ss_pred             HHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCC--CCeEECCEeecCCCCCChHhh
Confidence            999999999999999999999999999999999999999999999999999998753  389999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +|+|||+++++.|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|++|+..
T Consensus       360 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~vN~~~  419 (456)
T cd07145         360 EEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVVINDST  419 (456)
T ss_pred             CCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            999999999999999999999999999999999999999999999999999999999765

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=100.00  E-value=2.2e-71  Score=572.39  Aligned_cols=373  Identities=51%  Similarity=0.877  Sum_probs=342.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..++........+.++.+++++++|+|||..++...|+..+++.+++++.++++..++..+...+...+..++|+|||
T Consensus        69 ~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GvV  148 (484)
T cd07144          69 ERGELLDKLADLVEKNRDLLAAIEALDSGKPYHSNALGDLDEIIAVIRYYAGWADKIQGKTIPTSPNKLAYTLHEPYGVC  148 (484)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCceEEEEEecceEE
Confidence            44445555544444556777999999999999876444999999999999998877766544333345568899999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++ +.++.|+.||+++.|.
T Consensus       149 ~~I~p~N~P~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~~~~vd~V~  228 (484)
T cd07144         149 GQIIPWNYPLAMAAWKLAPALAAGNTVVIKPAENTPLSLLYFANLVKEAGFPPGVVNIIPGYGAVAGSALAEHPDVDKIA  228 (484)
T ss_pred             EEECcCCCHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCcCCCcEEEEecCCchHHHHHhcCCCcCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999976 8899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       229 fTGS~~~g~~i~~~a~-~~~~~~~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~~~l  307 (484)
T cd07144         229 FTGSTATGRLVMKAAA-QNLKAVTLECGGKSPALVFEDADLDQAVKWAAAGIMYNSGQNCTATSRIYVQESIYDKFVEKF  307 (484)
T ss_pred             EECcHHHHHHHHHHHH-hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceEEEcHHHHHHHHHHH
Confidence            9999999999999888 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhh-cccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC---CCCcccccceeccCcchhHHHHH
Q psy5844         269 GERAKR-RTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG---DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       269 ~~~~~~-~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      ++++++ +++|+|.++++++||+++..+++++.+++++++.+|+++++||....   ..|+|+.||++.++++++.++.+
T Consensus       308 ~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~e  387 (484)
T cd07144         308 VEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEGLGKGYFIPPTIFTDVPQDMRIVKE  387 (484)
T ss_pred             HHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccCCCCceECCEEEeCCCCCCchhhC
Confidence            999985 89999999999999999999999999999999999999999987643   36899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+|||++++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       388 E~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~iN~~~  446 (484)
T cd07144         388 EIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVWINSSN  446 (484)
T ss_pred             CCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999865

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=100.00  E-value=2.2e-71  Score=574.90  Aligned_cols=373  Identities=39%  Similarity=0.593  Sum_probs=344.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++.++++..+...+...+...+++++|+|||
T Consensus        92 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  170 (512)
T cd07124          92 ERARLLLRAAALLRRRRFELAAWMVLEVGKNWAEADA-DVAEAIDFLEYYAREMLRLRGFPVEMVPGEDNRYVYRPLGVG  170 (512)
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHHHHcCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecceEE
Confidence            3444444444444455777899999999999999998 999999999999998877655444333456788999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++ +.+..|+.||+++.|.
T Consensus       171 ~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V~  250 (512)
T cd07124         171 AVISPWNFPLAILAGMTTAALVTGNTVVLKPAEDTPVIAAKLVEILEEAGLPPGVVNFLPGPGEEVGDYLVEHPDVRFIA  250 (512)
T ss_pred             EEECCCChHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCCCceEEeccCchHHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999976 7889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCC-----CCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         189 FTGSTEVGKLVQQGSGAS-----NLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~-----~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      ||||+.+|+.|.+.+++.     +++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++
T Consensus       251 fTGs~~~g~~i~~~aa~~~~~~~~l~~~~lElgGk~p~iV~~daDl~~Aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~~~  330 (512)
T cd07124         251 FTGSREVGLRIYERAAKVQPGQKWLKRVIAEMGGKNAIIVDEDADLDEAAEGIVRSAFGFQGQKCSACSRVIVHESVYDE  330 (512)
T ss_pred             EeCchHHHHHHHHHHhcccccccCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhhCCCccccceEEEEcHHHHHH
Confidence            999999999999988843     689999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCC--CCcccccceeccCcchhHH
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD--KGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~--~g~~v~pti~~~~~~~~~~  341 (442)
                      |+++|+++++++++|+|.|+++++||++++.+++++.++|++++. |+++++||...+.  +|+|+.|||+.++.+++.+
T Consensus       331 f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~-g~~vl~gG~~~~~~~~g~~~~Ptvl~~v~~~~~i  409 (512)
T cd07124         331 FLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKS-EGRLLLGGEVLELAAEGYFVQPTIFADVPPDHRL  409 (512)
T ss_pred             HHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHh-CCEEEecCccCCCCCCCceEcCEEEecCCCCChH
Confidence            999999999999999999999999999999999999999999988 8899999976432  6899999999999999999


Q ss_pred             HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +.+|+||||+++..|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+...
T Consensus       410 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~vN~~~~  472 (512)
T cd07124         410 AQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLYANRKIT  472 (512)
T ss_pred             HhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999999999998653

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=100.00  E-value=2.2e-71  Score=569.47  Aligned_cols=368  Identities=34%  Similarity=0.523  Sum_probs=340.3

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc---C--CCcceEEEe
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI---N--GDFFAYTRH  103 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~--~~~~~~~~~  103 (442)
                      ..+.+++++......+.++.+++++++|+|||+.+++. |+..+++.+++++..+.+..++..+.   +  .+...+..+
T Consensus        58 ~~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  136 (472)
T TIGR03250        58 YERSAILDRAAALLAARKEEISDLITLESGLSKKDSLY-EVGRVADVLTFAAAEALRDDGQIFSCDLTPHGKARKVFTQR  136 (472)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccCCCCCCceEEEEE
Confidence            34455666555555556788899999999999999998 99999999999998886665543321   1  234568899


Q ss_pred             ecc-ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcC
Q psy5844         104 EPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQH  181 (442)
Q Consensus       104 ~P~-Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~  181 (442)
                      +|+ |||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++ +.+..|+.|
T Consensus       137 ~P~~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~  216 (472)
T TIGR03250       137 EPLLGVISAITPFNHPMNQVAHKIAPAIATNNRMVVKPSEKTPLSALYLADILYEAGLPPQMLQVVTGDPREIADELITN  216 (472)
T ss_pred             cCCCCEEEEEcCCcHHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcccEEEEecCchHHHHHHhcC
Confidence            997 999999999999999999999999999999999999999999999999999999999999999976 788999999


Q ss_pred             CCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH
Q psy5844         182 PGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY  261 (442)
Q Consensus       182 ~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~  261 (442)
                      |+++.|.||||+.+|+.|++.++   .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++
T Consensus       217 ~~v~~v~fTGs~~~g~~i~~~a~---~~~~~lElGGk~p~iV~~dAdl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~  293 (472)
T TIGR03250       217 PHVDLVTFTGGVAIGKYIAARAG---YRRQVLELGGNDPLIVMEDADLDRAADLAVKGSYKNSGQRCTAVKRMLVQESVA  293 (472)
T ss_pred             CCCCEEEEECcHHHHHHHHHHhc---CCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHHhhCCCCCCCcEEEEeHhHH
Confidence            99999999999999999998764   589999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHH
Q psy5844         262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~  341 (442)
                      |+|+++|++.++++++|+|.++++++||+++..+++++.+++++++.+|+++++||..   .|+|++|||++++.++|.+
T Consensus       294 d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~PTvl~~v~~~~~i  370 (472)
T TIGR03250       294 DRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVR---DGALYAPTVLDRVDPSMTL  370 (472)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCc---CCEEEcCEEEeCCCCCChH
Confidence            9999999999999999999999999999999999999999999999999999999864   5889999999999999999


Q ss_pred             HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +++|+||||++++.|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus       371 ~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~  432 (472)
T TIGR03250       371 VREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVNVWEVP  432 (472)
T ss_pred             HhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEEEcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999765

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=2.9e-71  Score=570.53  Aligned_cols=373  Identities=40%  Similarity=0.674  Sum_probs=343.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gv  108 (442)
                      ++..++++......+.++.+++++++|+|||..++...|+..+++.+++++..++.+.+...+. ..+...+++++|+||
T Consensus        62 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~r~P~GV  141 (475)
T PRK13473         62 ERAEALLKLADAIEENADEFARLESLNCGKPLHLALNDEIPAIVDVFRFFAGAARCLEGKAAGEYLEGHTSMIRRDPVGV  141 (475)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEeccee
Confidence            4455555555555566788899999999999999975599999999999998877665542221 133456889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|+|++|+++|++ +.+..|+.||+++.|
T Consensus       142 v~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~~l~~~~~vd~V  220 (475)
T PRK13473        142 VASIAPWNYPLMMAAWKLAPALAAGNTVVLKPSEITPLTALKLAELAADI-LPPGVLNVVTGRGATVGDALVGHPKVRMV  220 (475)
T ss_pred             EEEEccCChHHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHh-CCcCcEEEEecCchHHHHHHhcCCCCCEE
Confidence            99999999999999999999999999999999999999999999999999 9999999999966 889999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       221 ~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dADld~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~f~~~  299 (475)
T PRK13473        221 SLTGSIATGKHVLSAAA-DSVKRTHLELGGKAPVIVFDDADLDAVVEGIRTFGYYNAGQDCTAACRIYAQRGIYDDLVAK  299 (475)
T ss_pred             EEECcHHHHHHHHHHHh-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcHHHHHHHHHH
Confidence            99999999999999888 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcC-CEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQG-AQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |+++++++++|+|.|+++++||++++.+++++.++|+++..+| +++++||...+..|+|+.|||+.++.+++.++++|+
T Consensus       300 l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~  379 (475)
T PRK13473        300 LAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGYYYEPTLLAGARQDDEIVQREV  379 (475)
T ss_pred             HHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCceeEcCEEEecCCCCChhhhCCc
Confidence            9999999999999999999999999999999999999999999 999999986544689999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||||++++.|++.+|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       380 FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~  437 (475)
T PRK13473        380 FGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTWVNTHFM  437 (475)
T ss_pred             cCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999998764

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=100.00  E-value=2e-71  Score=573.21  Aligned_cols=372  Identities=42%  Similarity=0.726  Sum_probs=342.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHh-hhcCcccccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFAD-KIHGKTIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~P~Gv  108 (442)
                      .|..++.+......++++.+++++++|+|||+.+++. |+..+++.+++++..+. ...++..+. .+...+..++|+||
T Consensus        61 ~R~~iL~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  138 (488)
T TIGR02299        61 ERKRYLHKIADLIEQHADEIAVLECLDCGQPLRQTRQ-QVIRAAENFRFFADKCEEAMDGRTYPV-DTHLNYTVRVPVGP  138 (488)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHhHHHhcCCccccC-CCceEEEEEEecce
Confidence            4555555555555566778899999999999999997 99999999999998776 333433332 23456889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.||.++.|
T Consensus       139 v~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V  218 (488)
T TIGR02299       139 VGLITPWNAPFMLSTWKIAPALAFGNTVVLKPAEWSPLTAARLAEIAKEAGLPDGVFNLVHGFGEEAGKALVAHPDVKAV  218 (488)
T ss_pred             EEEECCCccHHHHHHHHHHHHHHcCCEEEEECchhchHHHHHHHHHHHHcCcChhheeEEeCCchHHHHHHhcCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999866 788899999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       219 ~fTGS~~~G~~i~~~aa-~~l~~~~lElGGknp~iV~~dAdl~~A~~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~  297 (488)
T TIGR02299       219 SFTGETATGSIIMRNGA-DTLKRFSMELGGKSPVIVFDDADLERALDAVVFMIFSFNGERCTASSRLLVQESIAEDFVEK  297 (488)
T ss_pred             EEECcHHHHHHHHHHHH-hcCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhccCCCCCCCcEEEEcHHHHHHHHHH
Confidence            99999999999999888 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-------CCCcccccceeccCcchhH
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-------DKGFYVQPTVFANVRDDMK  340 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-------~~g~~v~pti~~~~~~~~~  340 (442)
                      |+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||....       .+|+|++|||+.++.+++.
T Consensus       298 l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~g~~~~Ptvl~~~~~~~~  377 (488)
T TIGR02299       298 LVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGRGNYVLPTVFTGADNHMR  377 (488)
T ss_pred             HHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCCCeEEccEEEecCCCCCc
Confidence            999999999999999999999999999999999999999999999999987532       2588999999999999999


Q ss_pred             HHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         341 IAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       341 ~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ++++|+||||+++..|++.+|+|+++|+.+++|+++|||+|.+.+.++++++++|.|++|+...
T Consensus       378 i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~  441 (488)
T TIGR02299       378 IAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIWVNSQNV  441 (488)
T ss_pred             hhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999997653

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=100.00  E-value=3.7e-71  Score=566.98  Aligned_cols=372  Identities=45%  Similarity=0.754  Sum_probs=345.5

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccce
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  108 (442)
                      ..+..++.+......+.++.+++++++|+|||..+++. |+..+++.+++++.+.++..+...+...+...+.+++|+||
T Consensus        42 ~~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GV  120 (454)
T cd07109          42 AERGRLLLRIARLIREHADELARLESLDTGKPLTQARA-DVEAAARYFEYYGGAADKLHGETIPLGPGYFVYTVREPHGV  120 (454)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceEEEEEeeeeE
Confidence            34555666665555566888999999999999999998 99999999999998887776654443345668899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.||+++.|
T Consensus       121 v~~I~P~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~L~~~~~v~~v  200 (454)
T cd07109         121 TGHIIPWNYPLQITGRSVAPALAAGNAVVVKPAEDAPLTALRLAELAEEAGLPAGALNVVTGLGAEAGAALVAHPGVDHI  200 (454)
T ss_pred             EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999966 888999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++
T Consensus       201 ~ftGs~~~g~~i~~~aa-~~~~p~~lElgG~~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~  279 (454)
T cd07109         201 SFTGSVETGIAVMRAAA-ENVVPVTLELGGKSPQIVFADADLEAALPVVVNAIIQNAGQTCSAGSRLLVHRSIYDEVLER  279 (454)
T ss_pred             EEECCHHHHHHHHHHHh-hcCCcEEEECCCCCceEECCCCCHHHHHHHHHHHHHhccCCCCccCcEEEEcHHHHHHHHHH
Confidence            99999999999999888 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC---CCCcccccceeccCcchhHHHHH
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG---DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      |+++++++++|+|.+ .+++||++++.+++++.+++++++.+|+++++||....   +.|+|+.|||+.++.+++.++++
T Consensus       280 l~~~~~~~~~G~p~~-~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~e  358 (454)
T cd07109         280 LVERFRALRVGPGLE-DPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVAPTLLDDVPPDSRLAQE  358 (454)
T ss_pred             HHHHHHhCCCCCCcc-cCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEECcEEEecCCCCChhhhC
Confidence            999999999999986 58999999999999999999999999999999986533   36899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       359 E~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~  417 (454)
T cd07109         359 EIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVFVNNYG  417 (454)
T ss_pred             CCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999865

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=100.00  E-value=3.6e-71  Score=569.46  Aligned_cols=373  Identities=40%  Similarity=0.703  Sum_probs=345.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+.++++.......+.++.+++++++|+|||..+++. |+..+++.+++++.++.+..+...+.+ .+...+.+++|+||
T Consensus        58 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~a~~~~~~~~~~~~~~~~~~~~~~P~Gv  136 (468)
T cd07088          58 ERAAYLRKLADLIRENADELAKLIVEEQGKTLSLARV-EVEFTADYIDYMAEWARRIEGEIIPSDRPNENIFIFKVPIGV  136 (468)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCccccCccccceeEEEEeccee
Confidence            3444555554444556778899999999999999998 999999999999998877656544332 35567899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|+++++++++ +.++.|+.||+++.|
T Consensus       137 v~~I~p~N~P~~~~~~~~~~AL~aGN~VVlKps~~~p~~~~~l~~~~~~aglP~gvv~~v~g~~~~~~~~l~~~~~v~~V  216 (468)
T cd07088         137 VAGILPWNFPFFLIARKLAPALVTGNTIVIKPSEETPLNALEFAELVDEAGLPAGVLNIVTGRGSVVGDALVAHPKVGMI  216 (468)
T ss_pred             EEEEccCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999977 688999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       217 ~ftGs~~~g~~i~~~aa-~~~~~~~lelGG~~~~iV~~dadl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~  295 (468)
T cd07088         217 SLTGSTEAGQKIMEAAA-ENITKVSLELGGKAPAIVMKDADLDLAVKAIVDSRIINCGQVCTCAERVYVHEDIYDEFMEK  295 (468)
T ss_pred             EEECcHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHhcccCcCCcCCeEEEEcHHHHHHHHHH
Confidence            99999999999999888 68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-CCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |+++++++++|+|.++++++||++++.+++++.++|++++.+|+++++||.... +.|+|++|||+.++++++.++.+|+
T Consensus       296 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~  375 (468)
T cd07088         296 LVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEPTVLTNVRQDMEIVQEEI  375 (468)
T ss_pred             HHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcCEEEecCCCCCchhhCCC
Confidence            999999999999999999999999999999999999999999999999997643 4689999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |||++++..|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+...
T Consensus       376 fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~  433 (468)
T cd07088         376 FGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETYINRENF  433 (468)
T ss_pred             cCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999998764

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=100.00  E-value=6.8e-71  Score=568.59  Aligned_cols=373  Identities=45%  Similarity=0.730  Sum_probs=345.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+.+++++......+.++.+++++++|+|||..+++. |+..+++.+++++...+...++..+.. .+...+.+++|+||
T Consensus        60 ~R~~~l~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  138 (478)
T cd07131          60 RRAEYLFRAAELLKKRKEELARLVTREMGKPLAEGRG-DVQEAIDMAQYAAGEGRRLFGETVPSELPNKDAMTRRQPIGV  138 (478)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcccccCCCCceEEEEeeceeE
Confidence            4555666665555566788899999999999999998 999999999999988766655443322 23457899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++ +.+..|+.||+++.|
T Consensus       139 v~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~vd~V  218 (478)
T cd07131         139 VALITPWNFPVAIPSWKIFPALVCGNTVVFKPAEDTPACALKLVELFAEAGLPPGVVNVVHGRGEEVGEALVEHPDVDVV  218 (478)
T ss_pred             EEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHhcCcCCCcEEEEecCchHHHHHHhcCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999977 689999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++
T Consensus       219 ~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~  297 (478)
T cd07131         219 SFTGSTEVGERIGETCA-RPNKRVALEMGGKNPIIVMDDADLDLALEGALWSAFGTTGQRCTATSRLIVHESVYDEFLKR  297 (478)
T ss_pred             EEECcHHHHHHHHHHHh-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhhHHHHHHH
Confidence            99999999999999888 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHH
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++++++++|+|.|+++++||++++.+++++.+++++++.+|+++++||....    ..|+|++|||+.++.+++.++.
T Consensus       298 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~  377 (478)
T cd07131         298 FVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYFVEPTVFTDVTPDMRIAQ  377 (478)
T ss_pred             HHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEeCCCCCChHhh
Confidence            999999999999999999999999999999999999999999999999997542    3689999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +|+||||+++..|++++|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       378 ~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~  438 (478)
T cd07131         378 EEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITYVNAPTI  438 (478)
T ss_pred             CCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999999998754

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=100.00  E-value=8.7e-71  Score=563.06  Aligned_cols=369  Identities=39%  Similarity=0.642  Sum_probs=341.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.++++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.....  +.......+...+.+++|+|||
T Consensus        42 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~--~~~~~~~~~~~~~~~~~P~GVv  118 (446)
T cd07106          42 ERRAALLAIADAIEANAEELARLLTLEQGKPLAEAQF-EVGGAVAWLRYTASLDLP--DEVIEDDDTRRVELRRKPLGVV  118 (446)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHhhhhc--CccccCCCCceEEEEEEcceEE
Confidence            4455555555555566788999999999999999998 999999999999876531  2222222355678999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|++++++|+.+.+..|+.||+++.|.|
T Consensus       119 ~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~~~~~-lP~g~~~~v~g~~~~~~~l~~~~~vd~V~f  197 (446)
T cd07106         119 AAIVPWNFPLLLAAWKIAPALLAGNTVVLKPSPFTPLCTLKLGELAQEV-LPPGVLNVVSGGDELGPALTSHPDIRKISF  197 (446)
T ss_pred             EEEcCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHh-CCcCeEEEeeCChhHHHHHhcCCCCCEEEE
Confidence            9999999999999999999999999999999999999999999999995 999999999986588899999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG  269 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~  269 (442)
                      |||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus       198 TGs~~~g~~v~~~aa-~~~~~~~lElGG~~p~iV~~dADl~~aa~~iv~~~~~~~GQ~C~a~~rv~V~~~v~d~f~~~l~  276 (446)
T cd07106         198 TGSTATGKKVMASAA-KTLKRVTLELGGNDAAIVLPDVDIDAVAPKLFWGAFINSGQVCAAIKRLYVHESIYDEFCEALV  276 (446)
T ss_pred             ECCHHHHHHHHHHHH-hcCCeeEEecCCCCeeEECCCCCHHHHHHHHHHHHHHhcCCCCCCCcEEEEccccHHHHHHHHH
Confidence            999999999999888 5899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCC
Q psy5844         270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP  349 (442)
Q Consensus       270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgP  349 (442)
                      ++++++++|+|.|+++++||++++.+++++.++++++..+|+++++||...+..|+|+.|||+.++++++.++.+|+|||
T Consensus       277 ~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~~E~FgP  356 (446)
T cd07106         277 ALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPPTIVDDPPEGSRIVDEEQFGP  356 (446)
T ss_pred             HHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEEEeCCCCCCHHHhcCccCC
Confidence            99999999999999999999999999999999999999999999999976555689999999999999999999999999


Q ss_pred             cccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       350 vl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |++++.|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+..
T Consensus       357 vl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~iN~~~  410 (446)
T cd07106         357 VLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVWINTHG  410 (446)
T ss_pred             eEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEEECCCC
Confidence            999999999999999999999999999999999999999999999999999876

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=100.00  E-value=7.6e-71  Score=569.33  Aligned_cols=373  Identities=33%  Similarity=0.510  Sum_probs=343.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc--cCCCcceEEEeeccc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP--INGDFFAYTRHEPVG  107 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~P~G  107 (442)
                      .+..++++......+.++.+++++++|+|||+.++.. |+..+++.+++++..+.+..+....  ...+...+++++|+|
T Consensus        78 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  156 (500)
T cd07083          78 DRARLLLKAADLLRRRRRELIATLTYEVGKNWVEAID-DVAEAIDFIRYYARAALRLRYPAVEVVPYPGEDNESFYVGLG  156 (500)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCCceEEEEEeccc
Confidence            3445555555544555777899999999999999988 9999999999999988776554321  124556788999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK  186 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~  186 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|++ +.+..|+.||+++.
T Consensus       157 Vv~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaGlP~gvv~~v~g~~~~~~~~L~~~~~v~~  236 (500)
T cd07083         157 AGVVISPWNFPVAIFTGMIVAPVAVGNTVIAKPAEDAVVVGYKVFEIFHEAGFPPGVVQFLPGVGEEVGAYLTEHERIRG  236 (500)
T ss_pred             eEEEEcCCccHHHHHHHHHHHHHHcCCeEEEeCCCcchHHHHHHHHHHHHcCCCCCceEEEeCCCchhHHHHhcCCCcCE
Confidence            99999999999999999999999999999999999999999999999999999999999999976 88999999999999


Q ss_pred             EeecCCHHHHHHHHhhccCCCC------ceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCcc
Q psy5844         187 VAFTGSTEVGKLVQQGSGASNL------KRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTI  260 (442)
Q Consensus       187 v~ftGs~~~~~~i~~~~~~~~~------~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~  260 (442)
                      |.||||+.+|+.|.+.+++ +.      +|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||+++
T Consensus       237 v~ftGs~~~g~~v~~~aa~-~~~~~~~~~~v~lElgG~~~~iV~~dadl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i  315 (500)
T cd07083         237 INFTGSLETGKKIYEAAAR-LAPGQTWFKRLYVETGGKNAIIVDETADFELVVEGVVVSAFGFQGQKCSAASRLILTQGA  315 (500)
T ss_pred             EEEECcHHHHHHHHHHHhh-ccccccccCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHH
Confidence            9999999999999998884 54      9999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhH
Q psy5844         261 YDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK  340 (442)
Q Consensus       261 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~  340 (442)
                      +|+|+++|+++++++++|+|.++++++||++++.+++++.+++++++..| ++++||...+..|+|+.||++.++.+++.
T Consensus       316 ~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g-~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~  394 (500)
T cd07083         316 YEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEG-QLVLGGKRLEGEGYFVAPTVVEEVPPKAR  394 (500)
T ss_pred             HHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCC-EEEeCCCcCCCCCeEEccEEEeCCCCCCh
Confidence            99999999999999999999999999999999999999999999998877 89999876555689999999999999999


Q ss_pred             HHHHhhcCCcccccccC--CHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         341 IAREEIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       341 ~~~~e~fgPvl~v~~~~--~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      ++.+|+|||++++..|+  +++|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+....
T Consensus       395 ~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~~  461 (500)
T cd07083         395 IAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLYINRKITG  461 (500)
T ss_pred             HhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEEECCCCCC
Confidence            99999999999999999  999999999999999999999999999999999999999999987543

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=100.00  E-value=8.4e-71  Score=564.54  Aligned_cols=374  Identities=51%  Similarity=0.801  Sum_probs=345.7

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..+++.......++++.+++++++|+|||+.++...|+..+++.+++++.++++..+...+...+...+++++|+|||
T Consensus        49 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GvV  128 (462)
T cd07112          49 ERKAVLLRLADLIEAHRDELALLETLDMGKPISDALAVDVPSAANTFRWYAEAIDKVYGEVAPTGPDALALITREPLGVV  128 (462)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCceecCCCCeEEEEEEeeeeeE
Confidence            44555555555555678888999999999999999755999999999999998877665433322345678899999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.|++++.|.
T Consensus       129 ~~i~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~V~  208 (462)
T cd07112         129 GAVVPWNFPLLMAAWKIAPALAAGNSVVLKPAEQSPLTALRLAELALEAGLPAGVLNVVPGFGHTAGEALGLHMDVDALA  208 (462)
T ss_pred             EEECCCchHHHHHHHHHHHHHHcCCeeeeeCCCCCCHHHHHHHHHHHhcCCCCCcEEEEeCCCchHHHHHhcCCCcCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999976 7899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCC-CHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA-DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~da-d~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      ||||+.+|+.|++.++..++||+++|+||+||+||++|+ |++.|++.+++++|.|+||.|++++|||||++++++|+++
T Consensus       209 fTGs~~~g~~i~~~aa~~~~~~~~lelgG~n~~iV~~da~dl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~  288 (462)
T cd07112         209 FTGSTEVGRRFLEYSGQSNLKRVWLECGGKSPNIVFADAPDLDAAAEAAAAGIFWNQGEVCSAGSRLLVHESIKDEFLEK  288 (462)
T ss_pred             EECCHHHHHHHHHHHHHhcCCEEEecCCCCCeEEECCCCcCHHHHHHHHHHHHHhccCCCCCCCeeEEEcHHHHHHHHHH
Confidence            999999999999988744789999999999999999999 9999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccCcchhHHHHHh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      |+++++++++|+|+++++++||++++.+++++.++|++++++|+++++||....  ..|+|+.|||+.++.+++.++.+|
T Consensus       289 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~~~~~~~~~~eE  368 (462)
T cd07112         289 VVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGFFVEPTVFDGVTPDMRIAREE  368 (462)
T ss_pred             HHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCeEEeeEEecCCCCCChHHhCC
Confidence            999999999999999999999999999999999999999999999999987532  258899999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +||||++++.|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       369 ~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~  426 (462)
T cd07112         369 IFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVWVNCFD  426 (462)
T ss_pred             CCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999864

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=100.00  E-value=8.7e-71  Score=563.95  Aligned_cols=371  Identities=35%  Similarity=0.554  Sum_probs=340.7

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc-c--cCCCcceEEEeecc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-P--INGDFFAYTRHEPV  106 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-~--~~~~~~~~~~~~P~  106 (442)
                      .+.+++++......+.++.+++++++|+|||..++.. |+..+++.+++++..+.+..+... .  ++.....+.+++|+
T Consensus        41 ~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~  119 (454)
T cd07101          41 ERAAVFLRFHDLVLERRDELLDLIQLETGKARRHAFE-EVLDVAIVARYYARRAERLLKPRRRRGAIPVLTRTTVNRRPK  119 (454)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHHhCCccccccCCCCceEEEEEEec
Confidence            4455555555555566788899999999999999987 999999999999988866654322 1  11234578999999


Q ss_pred             ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCcc
Q psy5844         107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVD  185 (442)
Q Consensus       107 Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~  185 (442)
                      |||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.|  ++
T Consensus       120 GvV~~I~p~N~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~--~~  197 (454)
T cd07101         120 GVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTALTALWAVELLIEAGLPRDLWQVVTGPGSEVGGAIVDN--AD  197 (454)
T ss_pred             cEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCcHHHHHHHHhC--CC
Confidence            999999999999999999999999999999999999999999999999999999999999999976 788889987  57


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|.||||+.+|+.|++.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus       198 ~V~fTGs~~~g~~i~~~aa-~~~~~~~lElgG~~p~iV~~dAdl~~a~~~i~~~~~~~sGQ~C~a~~rv~V~~~i~d~f~  276 (454)
T cd07101         198 YVMFTGSTATGRVVAERAG-RRLIGCSLELGGKNPMIVLEDADLDKAAAGAVRACFSNAGQLCVSIERIYVHESVYDEFV  276 (454)
T ss_pred             EEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCceEEECCCCCHHHHHHHHHHHHHhcCCCCcccCeEEEEcHHHHHHHH
Confidence            8999999999999999988 588999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-CCCcccccceeccCcchhHHHHH
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      ++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||.... ..++|+.||++.++.+++.++++
T Consensus       277 ~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~Ptvl~~v~~~~~~~~e  356 (454)
T cd07101         277 RRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYEPTVLTGVTEDMELFAE  356 (454)
T ss_pred             HHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEcCEEEeCCCCCCHHHhC
Confidence            99999999999999999999999999999999999999999999999999986532 35799999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |+||||++++.|++.+|+++++|+.+++|+++|||+|.+++.++++++++|.|+||+...
T Consensus       357 E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~iN~~~~  416 (454)
T cd07101         357 ETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVNVNEGYA  416 (454)
T ss_pred             CCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999999998654

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=100.00  E-value=1e-70  Score=563.85  Aligned_cols=370  Identities=39%  Similarity=0.654  Sum_probs=344.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      ++.+++++......+.++.+++++++|+|||+.++.. |+..+++.+++++.++++..+...+.. .+...+.+++|+||
T Consensus        44 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  122 (451)
T cd07150          44 ERERILLKAAEIMERRADDLIDLLIDEGGSTYGKAWF-ETTFTPELLRAAAGECRRVRGETLPSDSPGTVSMSVRRPLGV  122 (451)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEecccE
Confidence            4455555555544556788899999999999999998 999999999999988877655544433 45667899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++ +.+..|+.||+++.|
T Consensus       123 v~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~t~~~l~~~~~~ag~P~g~v~~v~g~~~~~~~~l~~~~~v~~V  202 (451)
T cd07150         123 VAGITPFNYPLILATKKVAFALAAGNTVVLKPSEETPVIGLKIAEIMEEAGLPKGVFNVVTGGGAEVGDELVDDPRVRMV  202 (451)
T ss_pred             EEEECCCccHHHHHHHHHHHHHhcCCeEEEECCccCcHHHHHHHHHHHHhCCCcCcEEEeeCCCcHHHHHHhcCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999866 888999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++
T Consensus       203 ~ftGs~~~g~~i~~~aa-~~~~~~~lelGG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~~~f~~~  281 (451)
T cd07150         203 TFTGSTAVGREIAEKAG-RHLKKITLELGGKNPLIVLADADLDYAVRAAAFGAFMHQGQICMSASRIIVEEPVYDEFVKK  281 (451)
T ss_pred             EEECcHHHHHHHHHHHh-hcCCceEeecCCCCeeEECCCCChHHHHHHHHHHHHhhcCCCCCCCeeEEEcHHHHHHHHHH
Confidence            99999999999999888 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      |+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||..   +|+|+.|||+.++.+++.++.+|+|
T Consensus       282 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~~~~E~f  358 (451)
T cd07150         282 FVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKY---DGNFYQPTVLTDVTPDMRIFREETF  358 (451)
T ss_pred             HHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCcc---CCcEEcCEEEeCCCCCCHHHhCCCc
Confidence            9999999999999999999999999999999999999999999999999864   4789999999999999999999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||+++++.|++++|+++++|+.++||+++|||+|.+++.++++++++|.|+||+...
T Consensus       359 gPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~  415 (451)
T cd07150         359 GPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVHINDPTI  415 (451)
T ss_pred             CceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999998764

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=100.00  E-value=1.3e-70  Score=563.44  Aligned_cols=373  Identities=47%  Similarity=0.804  Sum_probs=346.9

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccc
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVG  107 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~G  107 (442)
                      .++..+++.......++++.+++++++|+|||+.++.. |+..+++.+++++.+.++..+...+.. .+...+.+++|+|
T Consensus        43 ~~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~G  121 (457)
T cd07114          43 TERGKLLRRLADLIEANAEELAELETRDNGKLIRETRA-QVRYLAEWYRYYAGLADKIEGAVIPVDKGDYLNFTRREPLG  121 (457)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEecce
Confidence            35566666666666677888999999999999999998 999999999999988776655433332 4456789999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK  186 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~  186 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|+++++++++ +.++.|+.|++++.
T Consensus       122 vv~~I~p~N~P~~~~~~~~~~AL~aGN~Vilkps~~~p~~~~~l~~~l~~aglP~~vv~~v~g~~~~~~~~l~~~~~i~~  201 (457)
T cd07114         122 VVAAITPWNSPLLLLAKKLAPALAAGNTVVLKPSEHTPASTLELAKLAEEAGFPPGVVNVVTGFGPETGEALVEHPLVAK  201 (457)
T ss_pred             EEEEECCCccHHHHHHHHHHHHHhcCCeEEeECCccchHHHHHHHHHHHHcCcCCCcEEEEeCCCchHHHHHhcCCCCCE
Confidence            99999999999999999999999999999999999999999999999999999999999999976 78899999999999


Q ss_pred             EeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHH
Q psy5844         187 VAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVA  266 (442)
Q Consensus       187 v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~  266 (442)
                      |.||||+.+|+.+++.++ .+++|+++|+||+||+||++|||++.|++.|++++|.|+||.|+++++||||++++++|++
T Consensus       202 V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~  280 (457)
T cd07114         202 IAFTGGTETGRHIARAAA-ENLAPVTLELGGKSPNIVFDDADLDAAVNGVVAGIFAAAGQTCVAGSRLLVQRSIYDEFVE  280 (457)
T ss_pred             EEEECCHHHHHHHHHHHH-hcCCeEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCCCCceEEEcHHHHHHHHH
Confidence            999999999999999888 5889999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHH
Q psy5844         267 RSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       267 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +|+++++++++|+|.++++++||++++.+.+++.+++++++.+|+++++||....    ..|+|+.|||+.++.+++.++
T Consensus       281 ~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~  360 (457)
T cd07114         281 RLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGYFFEPTILADVTNDMRIA  360 (457)
T ss_pred             HHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCCEECCEEEeCCCCCChhh
Confidence            9999999999999999999999999999999999999999999999999997643    357999999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      .+|+||||++++.|++.+|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+..
T Consensus       361 ~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~iN~~~  421 (457)
T cd07114         361 QEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVWVNTYR  421 (457)
T ss_pred             hcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999999864

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=100.00  E-value=1.3e-70  Score=568.82  Aligned_cols=372  Identities=36%  Similarity=0.558  Sum_probs=340.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhc-CcccccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIH-GKTIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~P~Gv  108 (442)
                      .|..++++......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++.. +.......+...+++++|+||
T Consensus        96 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~g~~~~~~~~P~GV  174 (514)
T PRK03137         96 DRARILLRAAAIIRRRKHEFSAWLVKEAGKPWAEADA-DTAEAIDFLEYYARQMLKLADGKPVESRPGEHNRYFYIPLGV  174 (514)
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEecCcE
Confidence            4445555555545555677799999999999999998 99999999999998876654 222211245667899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++ +.++.|+.||+++.|
T Consensus       175 v~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~~a~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V  254 (514)
T PRK03137        175 GVVISPWNFPFAIMAGMTLAAIVAGNTVLLKPASDTPVIAAKFVEVLEEAGLPAGVVNFVPGSGSEVGDYLVDHPKTRFI  254 (514)
T ss_pred             EEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCCCcEEEeecCchHHHHHHhcCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999976 888999999999999


Q ss_pred             eecCCHHHHHHHHhhccC-----CCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         188 AFTGSTEVGKLVQQGSGA-----SNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      .||||+.+|+.|++.+++     .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|
T Consensus       255 ~fTGs~~~G~~i~~~aa~~~~~~~~l~~v~lElgGk~~~iV~~daDl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~v~d  334 (514)
T PRK03137        255 TFTGSREVGLRIYERAAKVQPGQIWLKRVIAEMGGKDAIVVDEDADLDLAAESIVASAFGFSGQKCSACSRAIVHEDVYD  334 (514)
T ss_pred             EEECCcHHHHHHHHHHhcccccccccceEEecCCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCccCeEEEEeHHHHH
Confidence            999999999999998873     168999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +|+++|++.++++++|+|.+++ ++||++++.+++++.+++++++.. +++++||...+..|+|++|||+.++.+++.++
T Consensus       335 ~f~~~l~~~~~~l~~g~p~~~~-~~Gpli~~~~~~~v~~~v~~a~~~-~~vl~Gg~~~~~~g~~~~Ptvl~~v~~~~~~~  412 (514)
T PRK03137        335 EVLEKVVELTKELTVGNPEDNA-YMGPVINQASFDKIMSYIEIGKEE-GRLVLGGEGDDSKGYFIQPTIFADVDPKARIM  412 (514)
T ss_pred             HHHHHHHHHHHhCCCCCCCCcc-CcCCCCCHHHHHHHHHHHHHHHhC-CEEEeCCCcCCCCceEEeeEEEeCCCCCCHHH
Confidence            9999999999999999999998 999999999999999999999887 59999987655568999999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      .+|+||||+++..|++++|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       413 ~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~IN~~~~  474 (514)
T PRK03137        413 QEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLYFNRGCT  474 (514)
T ss_pred             hCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999999997643

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=100.00  E-value=1.5e-70  Score=565.46  Aligned_cols=373  Identities=29%  Similarity=0.402  Sum_probs=338.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..++++......+.++.+++++++|+|||..++.. |+..+++.+++++.......+.......+...+++++|+|||
T Consensus        58 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~GVv  136 (484)
T TIGR03240        58 ERIAVVQRFAALLEERKEALARVIARETGKPLWETRT-EVASMIGKVAISIKAYHERTGESENPMPDGRAVLRHRPHGVV  136 (484)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEEecccEE
Confidence            4455555555555566788899999999999999998 999999999988877655544432111334568889999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+.+.++.|+.||++|.|.|
T Consensus       137 ~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKPs~~tp~t~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~L~~~~~vd~V~f  216 (484)
T TIGR03240       137 AVFGPYNFPGHLPNGHIVPALLAGNTVVFKPSELTPWVAEETVKLWEKAGLPAGVLNLVQGARETGVALAAHPDIDGLLF  216 (484)
T ss_pred             EEECCCchHHHHHHHHHHHHHHcCCEEEEECCccccHHHHHHHHHHHHhCcCcccEEEEeCCHHHHHHHhcCCCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999985588899999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH-HHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY-DEFVARS  268 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~-~~f~~~l  268 (442)
                      |||+.+|+.|++.+++...+++++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++ |+|+++|
T Consensus       217 TGS~~~G~~i~~~aa~~~~~~~~lElGGk~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~~~~d~f~~~l  296 (484)
T TIGR03240       217 TGSSNTGHLLHRQFAGRPEKILALEMGGNNPLIVDEVADIDAAVHLIIQSAFISAGQRCTCARRLLVPDGAQGDAFLARL  296 (484)
T ss_pred             ECCHHHHHHHHHHhhhcCCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeccccHHHHHHHH
Confidence            999999999999876445788999999999999999999999999999999999999999999999999985 9999999


Q ss_pred             HHHHhhcccCCC-CCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         269 GERAKRRTVGDP-FDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       269 ~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      .+.++++++|+| .++++++||+++..+++++.+++++++.+|+++++||...+++++|++|||+ ++++++.++.+|+|
T Consensus       297 ~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~PTvl-~v~~~~~i~~eE~F  375 (484)
T TIGR03240       297 VEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTPGII-DVTGVAELPDEEHF  375 (484)
T ss_pred             HHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcCEEE-ccCCCCHHHhCCCc
Confidence            999999999997 5778899999999999999999999999999999988654456789999999 58888999999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+...
T Consensus       376 GPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~iN~~~~  432 (484)
T TIGR03240       376 GPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVNWNKPLT  432 (484)
T ss_pred             CCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEECCCC
Confidence            999999999999999999999999999999999999999999999999999998754

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=100.00  E-value=1.8e-70  Score=564.72  Aligned_cols=372  Identities=41%  Similarity=0.715  Sum_probs=342.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .|..+++.......+.++.+++++++|+|||+.++...|+..+++.+++++..+++..++..+...+...++.++|+|||
T Consensus        82 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv  161 (494)
T PRK09847         82 KRKAVLNKLADLMEAHAEELALLETLDTGKPIRHSLRDDIPGAARAIRWYAEAIDKVYGEVATTSSHELAMIVREPVGVI  161 (494)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCceeEEEecceeEE
Confidence            34455555545445667888999999999999988655999999999999998877766544333444568999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ +.+..|+.||.++.|.
T Consensus       162 ~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~L~~~~~vd~v~  241 (494)
T PRK09847        162 AAIVPWNFPLLLTCWKLGPALAAGNSVILKPSEKSPLSAIRLAGLAKEAGLPDGVLNVVTGFGHEAGQALSRHNDIDAIA  241 (494)
T ss_pred             EEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCChHHHHHHHHHHHHcCcCcCcEEEEeCCChhHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999976 7889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCC-CHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA-DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~da-d~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      ||||+.+|+.|.+.++...++|+++|+||+||.||.+|+ |++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       242 fTGs~~~g~~v~~~aa~~~~~~~~lElGGk~~~iV~~daaDl~~Aa~~i~~~~~~~aGQ~C~a~~rv~V~~~i~d~f~~~  321 (494)
T PRK09847        242 FTGSTRTGKQLLKDAGDSNMKRVWLEAGGKSANIVFADCPDLQQAASATAAGIFYNQGQVCIAGTRLLLEESIADEFLAL  321 (494)
T ss_pred             EECCHHHHHHHHHHhhhhCCCeEEEecCCCCeeEEcCCccCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHH
Confidence            999999999999988734789999999999999999997 9999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      |+++++++++|+|.++++++||+++..+++++.++|++++.+| ++++||... ..+.|++||++.++++++.++++|+|
T Consensus       322 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G-~i~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE~F  399 (494)
T PRK09847        322 LKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKG-QLLLDGRNA-GLAAAIGPTIFVDVDPNASLSREEIF  399 (494)
T ss_pred             HHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCC-eEEECCccC-CCCceEeeEEEeCCCCCChHHhCcCc
Confidence            9999999999999999999999999999999999999999999 999988753 35789999999999999999999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       400 gPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~  455 (494)
T PRK09847        400 GPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVFVNNYN  455 (494)
T ss_pred             CceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999864

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=100.00  E-value=1.6e-70  Score=560.45  Aligned_cols=369  Identities=36%  Similarity=0.538  Sum_probs=341.2

Q ss_pred             CCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-----CCcceEEE
Q psy5844          28 PITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-----GDFFAYTR  102 (442)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~  102 (442)
                      ...+..++++......+.++.+++++++|+|||+.++.. |+..+++.+++++..+....++..+..     .+...+.+
T Consensus        39 ~~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (451)
T cd07146          39 RYQRSAILNKAAALLEARREEFARLITLESGLCLKDTRY-EVGRAADVLRFAAAEALRDDGESFSCDLTANGKARKIFTL  117 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccCCCCceEEEE
Confidence            335556666665655666888999999999999999998 999999999999987766544433221     23456789


Q ss_pred             eeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcC
Q psy5844         103 HEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQH  181 (442)
Q Consensus       103 ~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~  181 (442)
                      ++|+|||++|+|||||++..++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++++++|++ ++++.|+.|
T Consensus       118 ~~P~Gvv~~I~P~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~l~~~  197 (451)
T cd07146         118 REPLGVVLAITPFNHPLNQVAHKIAPAIAANNRIVLKPSEKTPLSAIYLADLLYEAGLPPDMLSVVTGEPGEIGDELITH  197 (451)
T ss_pred             EeccceEEEEccCChHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHcCcCccceEEEecCchHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999999999999999999999999999976 789999999


Q ss_pred             CCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH
Q psy5844         182 PGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY  261 (442)
Q Consensus       182 ~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~  261 (442)
                      |+++.|.||||+.+|+.|.+.++   .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++
T Consensus       198 ~~i~~V~fTGs~~~g~~i~~~a~---~~~~~lElGG~~p~iV~~daDl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  274 (451)
T cd07146         198 PDVDLVTFTGGVAVGKAIAATAG---YKRQLLELGGNDPLIVMDDADLERAATLAVAGSYANSGQRCTAVKRILVHESVA  274 (451)
T ss_pred             CCCCEEEEECCHHHHHHHHHHhc---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHhhCCCCCCCCceEEEchHHH
Confidence            99999999999999999998765   579999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHH
Q psy5844         262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~  341 (442)
                      |+|+++|+++++++++|+|.|+++++||++++.+++++.+++++++.+|+++++||..   .|+|++|||+.++.+++.+
T Consensus       275 d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~---~g~~~~Ptvl~~~~~~~~~  351 (451)
T cd07146         275 DEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQR---QGALYAPTVLDHVPPDAEL  351 (451)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCc---CCEEEcCEEeecCCCCCHH
Confidence            9999999999999999999999999999999999999999999999999999999864   4789999999999999999


Q ss_pred             HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +++|+|||+++++.|++++|+++++|+.++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus       352 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~  413 (451)
T cd07146         352 VTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVNVNEVP  413 (451)
T ss_pred             HhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999999864

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=100.00  E-value=2.5e-70  Score=563.42  Aligned_cols=370  Identities=43%  Similarity=0.695  Sum_probs=337.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.++++.......+.++.+++++++|+|||+.++...|+..+++.+++++..+++..+...+...+...+.+++|+|||
T Consensus        61 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  140 (479)
T cd07116          61 ERANILNKIADRMEANLEMLAVAETWDNGKPVRETLAADIPLAIDHFRYFAGCIRAQEGSISEIDENTVAYHFHEPLGVV  140 (479)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhHHHcCCeeecCCCCceEEEEEeccceE
Confidence            44555555555555556778999999999999999855999999999999988766544433332344568899999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|.+ +.+..|+.||+++.|.
T Consensus       141 ~~I~PwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~l~~~a-lP~gvv~~v~g~~~~~~~~L~~~~~v~~V~  219 (479)
T cd07116         141 GQIIPWNFPLLMATWKLAPALAAGNCVVLKPAEQTPASILVLMELIGDL-LPPGVVNVVNGFGLEAGKPLASSKRIAKVA  219 (479)
T ss_pred             EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHH-CCcCcEEEEecCchhHHHHHhcCCCcCEEE
Confidence            9999999999999999999999999999999999999999999999998 9999999999866 8899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCC------CCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFAD------ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~d------ad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+|||||+||++|      ||++.|++.++++. +|+||.|++++|||||++++|
T Consensus       220 fTGS~~~G~~i~~~aa-~~~~p~~lElGGk~p~iV~~da~~~~~adl~~A~~~i~~~~-~~~GQ~C~a~~rv~V~~~i~d  297 (479)
T cd07116         220 FTGETTTGRLIMQYAS-ENIIPVTLELGGKSPNIFFADVMDADDAFFDKALEGFVMFA-LNQGEVCTCPSRALIQESIYD  297 (479)
T ss_pred             EECCHHHHHHHHHHHH-cCCCeEEEECCCCCeEEEecCcccccccCHHHHHHHHHHHH-hcCCCCCCCCeEEEEcHHHHH
Confidence            9999999999999988 589999999999999999988      79999999999865 599999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcch
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDD  338 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~  338 (442)
                      +|+++|.++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||....    ..|+|+.||++.+.. +
T Consensus       298 ~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~-~  376 (479)
T cd07116         298 RFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGGLLGGGYYVPTTFKGGN-K  376 (479)
T ss_pred             HHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeeecCeEEccCC-C
Confidence            99999999999999999999999999999999999999999999999999999997532    358899999998864 8


Q ss_pred             hHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         339 MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       339 ~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +.++++|+||||+++++|++++|+++++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus       377 ~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~iN~~~  441 (479)
T cd07116         377 MRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVWTNCYH  441 (479)
T ss_pred             ChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999764

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=100.00  E-value=3e-70  Score=562.74  Aligned_cols=373  Identities=41%  Similarity=0.660  Sum_probs=343.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcc-cccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT-IPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gv  108 (442)
                      .+.+++++......++++.+++++++|+|||..++...|+..+++.+++++..+++..+.. .+...+...+.+++|+||
T Consensus        61 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  140 (471)
T cd07139          61 ERAAVLRRLADALEARADELARLWTAENGMPISWSRRAQGPGPAALLRYYAALARDFPFEERRPGSGGGHVLVRREPVGV  140 (471)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccCCCCceEEEEEEeccE
Confidence            3445566665555667888899999999999988865599999999999998876554322 221134557899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA  188 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~  188 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++++++|+.+.+..|+.|+.++.|.
T Consensus       141 v~~I~p~N~P~~~~~~~i~~ALaaGN~VvlKps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~l~~~~~i~~v~  220 (471)
T cd07139         141 VAAIVPWNAPLFLAALKIAPALAAGCTVVLKPSPETPLDAYLLAEAAEEAGLPPGVVNVVPADREVGEYLVRHPGVDKVS  220 (471)
T ss_pred             EEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcCCHHHHHHHHHHHHcCCCCCcEEEEeCCHHHHHHHhcCCCCCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999998558889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       221 ftGs~~~g~~v~~~~~-~~~~~~~lElGG~np~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f~~~l  299 (471)
T cd07139         221 FTGSTAAGRRIAAVCG-ERLARVTLELGGKSAAIVLDDADLDAAVPGLVPASLMNNGQVCVALTRILVPRSRYDEVVEAL  299 (471)
T ss_pred             EECcHHHHHHHHHHHH-hcCCEEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEeHhHHHHHHHHH
Confidence            9999999999999888 588999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccCcchhHHHHHhh
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      +++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||....  +.++|+.|||+.++.+++.++.+|+
T Consensus       300 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~Ptvl~~v~~~~~~~~eE~  379 (471)
T cd07139         300 AAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGWFVEPTLFADVDNDMRIAQEEI  379 (471)
T ss_pred             HHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEccEEEecCCCcchHHhCcc
Confidence            99999999999999999999999999999999999999999999999997543  3589999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |||+++++.|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+..
T Consensus       380 FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~  436 (471)
T cd07139         380 FGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVGVNGFR  436 (471)
T ss_pred             CCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC
Confidence            999999999999999999999999999999999999999999999999999999865

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=100.00  E-value=2.8e-70  Score=561.97  Aligned_cols=369  Identities=39%  Similarity=0.625  Sum_probs=339.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.+++++......+.++.+++++++|+|||..++...|+..+++.+++++..++...+..    .....+.+++|+|||
T Consensus        59 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~~ev~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~GVv  134 (466)
T cd07138          59 ERAALLERIAEAYEARADELAQAITLEMGAPITLARAAQVGLGIGHLRAAADALKDFEFEE----RRGNSLVVREPIGVC  134 (466)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHhhhhccccc----cCceEEEEEeecceE
Confidence            4445555554544455788899999999999999975599999999999998776553321    123457789999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.||+++.|.
T Consensus       135 ~~I~p~N~P~~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aGlP~g~v~~v~g~~~~~~~~l~~~~~v~~v~  214 (466)
T cd07138         135 GLITPWNWPLNQIVLKVAPALAAGCTVVLKPSEVAPLSAIILAEILDEAGLPAGVFNLVNGDGPVVGEALSAHPDVDMVS  214 (466)
T ss_pred             EEECCCccHHHHHHHHHHHHHhcCCEEEEECCCcCcHHHHHHHHHHHHcCCCCCcEEEEeCCchhHHHHHhcCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999877 7899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       215 fTGs~~~g~~i~~~aa-~~~~~v~lElgG~~p~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f~~~l  293 (466)
T cd07138         215 FTGSTRAGKRVAEAAA-DTVKRVALELGGKSANIILDDADLEKAVPRGVAACFANSGQSCNAPTRMLVPRSRYAEAEEIA  293 (466)
T ss_pred             EECcHHHHHHHHHHHh-ccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEeHhHHHHHHHHH
Confidence            9999999999999988 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC---CCCcccccceeccCcchhHHHHHh
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG---DKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      +++++++++|||.++++++||++++.+++++.+++++++.+|+++++||....   ..|+|+.|||+.++.+++.++.+|
T Consensus       294 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~eE  373 (466)
T cd07138         294 AAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYFVKPTVFADVTPDMTIAREE  373 (466)
T ss_pred             HHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCceECCEEecCCCCCChHHhCC
Confidence            99999999999999999999999999999999999999999999999986432   358999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +||||++++.|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       374 ~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~iN~~~  431 (466)
T cd07138         374 IFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVHINGAA  431 (466)
T ss_pred             CCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999853

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=100.00  E-value=2.4e-71  Score=569.59  Aligned_cols=375  Identities=44%  Similarity=0.746  Sum_probs=348.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.++++.......++++.+++++++|+|||+.+++. |+..+++.+++++.+++++.++.++.+.+...+..++|+|||
T Consensus        52 ~R~~iL~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  130 (462)
T PF00171_consen   52 ERARILERFADLLEERRDELAELIALETGKPIAEARG-EVDRAIDFLRYYADAARKLAGEVLPSDPGSRNYTRREPLGVV  130 (462)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHTSSHHHHHH-HHHHHHHHHHHHHHHHHHHTEEEEEESTTEEEEEEEEE-SEE
T ss_pred             hHHHHHHHHHHHHhhcccccccccccccccccccccc-hhhhhhhhhhhhhhcccceehhhcccccccccccccccccce
Confidence            4556666665555577888999999999999999999 999999999999999988766555555678899999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.+..|+.||+++.|.
T Consensus       131 ~~i~p~n~P~~~~~~~~~~ALaaGN~VVlkps~~~~~~~~~l~~~~~~AglP~gvv~vv~g~~~~~~~~l~~~~~v~~v~  210 (462)
T PF00171_consen  131 LIITPWNFPLYLAVWKIAPALAAGNTVVLKPSEQAPLTALLLAELLEEAGLPPGVVNVVPGDGSEVGEALVSHPDVDLVS  210 (462)
T ss_dssp             EEEE-SSSCTHHHHHHHHHHHHTT-EEEEEEBTTSHHHHHHHHHHHHHHTSTTTSEEEECSSTHHHHHHHHHTTTEEEEE
T ss_pred             eecccccccccccccchhhhhcccccceeeeccccccccccchhhccccccccccccccccccccccceeeeccccceee
Confidence            999999999999999999999999999999999999999999999999999999999999977 8999999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ ++++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus       211 ftGs~~~g~~i~~~a~-~~~~~v~lelgG~~p~iV~~daDld~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~l  289 (462)
T PF00171_consen  211 FTGSTATGRAIAKAAA-KNLKPVVLELGGKNPVIVDPDADLDKAAEAIVRGAFFNSGQSCTAPSRVLVHESIYDEFVEAL  289 (462)
T ss_dssp             EESEHHHHHHHHHHHH-TTTSEEEEEECEEEEEEE-TTSHHHHHHHHHHHHHHGGGGTSTTSEEEEEEEHHHHHHHHHHH
T ss_pred             ecchhhhhhhhhhhcc-cccccccccccccceeeEecccccccccccccchhcccccccccccccccccccccchhhhhh
Confidence            9999999999999988 689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCC---cccCCCCcccccceeccCcchhHHHHHh
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGG---GRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg---~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      +++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||   ......|+|++|||+.++.+++.++++|
T Consensus       290 ~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~~E  369 (462)
T PF00171_consen  290 KERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPPTVLEDVPPDMPIMQEE  369 (462)
T ss_dssp             HHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEEEEEESEHTTSHHHHSC
T ss_pred             hhccccccccCCccccccccccccchhhhhcccccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            9999999999999999999999999999999999999999999999998   3445688999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV  406 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a  406 (442)
                      +||||++++.|++++|+++++|+.++|++++|||+|.+.++++++++++|.|+||+.....
T Consensus       370 ~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~~  430 (462)
T PF00171_consen  370 IFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVWINDPPTGD  430 (462)
T ss_dssp             -SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEEESSSSTGG
T ss_pred             cccccceecccccchhhhhcccccCCCceeEEecccccccccccccccccceeecCCcccc
Confidence            9999999999999999999999999999999999999999999999999999999996543

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=100.00  E-value=3.6e-70  Score=560.13  Aligned_cols=372  Identities=35%  Similarity=0.561  Sum_probs=343.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc-cc---CCCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PI---NGDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-~~---~~~~~~~~~~~P  105 (442)
                      .+.+++++......++++.+++++++|+|||..++.. |+..+++.+++++..+.+..+... +.   ..+...+++++|
T Consensus        41 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  119 (453)
T cd07099          41 GRAQRLLRWKRALADHADELAELLHAETGKPRADAGL-EVLLALEAIDWAARNAPRVLAPRKVPTGLLMPNKKATVEYRP  119 (453)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCcccCCCceeEEEEec
Confidence            4445555555555567888899999999999999988 999999999999988866654321 11   135567899999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD  185 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~  185 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|+++.+..|+.| .+|
T Consensus       120 ~Gvv~~I~p~N~P~~~~~~~l~~ALaaGN~vilKps~~~p~~~~~l~~~l~~ag~P~g~~~vv~g~~~~~~~l~~~-~vd  198 (453)
T cd07099         120 YGVVGVISPWNYPLLTPMGDIIPALAAGNAVVLKPSEVTPLVGELLAEAWAAAGPPQGVLQVVTGDGATGAALIDA-GVD  198 (453)
T ss_pred             ceEEEEECCCChHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHcCCCCCeEEEEeCCchHHHHHhcC-CCC
Confidence            9999999999999999999999999999999999999999999999999999999999999999876788888887 499


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|.||||+.+|+.|.+.++ .+.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus       199 ~V~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~p~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~ri~V~~~i~d~f~  277 (453)
T cd07099         199 KVAFTGSVATGRKVMAAAA-ERLIPVVLELGGKDPMIVLADADLERAAAAAVWGAMVNAGQTCISVERVYVHESVYDEFV  277 (453)
T ss_pred             EEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHH
Confidence            9999999999999999888 579999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++|+++++++++|+|.|+++++||++++.+++++.+++++++++|+++++||.+...+|+|+.|||+.++.+++.++.+|
T Consensus       278 ~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E  357 (453)
T cd07099         278 ARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPFYEPTVLTDVPHDMDVMREE  357 (453)
T ss_pred             HHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeEEecEEEecCCCCCHHHhCC
Confidence            99999999999999999999999999999999999999999999999999997643468999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +||||+++..|++.+|+|+++|+.+++|+++|||+|.+.+.++++++++|.|++|+...
T Consensus       358 ~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~  416 (453)
T cd07099         358 TFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVSINDVLL  416 (453)
T ss_pred             CcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999998754

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=100.00  E-value=2.9e-70  Score=567.10  Aligned_cols=371  Identities=35%  Similarity=0.546  Sum_probs=339.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc---cCCCcceEEEeecc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP---INGDFFAYTRHEPV  106 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~  106 (442)
                      ++.+++.+......+.++.+++++++|+|||..++.. |+..++..+++++..+++..+....   .+.....+.+++|+
T Consensus        77 ~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~P~  155 (524)
T PRK09407         77 ERAAVLLRFHDLVLENREELLDLVQLETGKARRHAFE-EVLDVALTARYYARRAPKLLAPRRRAGALPVLTKTTELRQPK  155 (524)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccccCCCCceEEEEEecc
Confidence            4455555554544555677799999999999999988 9999999999999888666553221   11224578899999


Q ss_pred             ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCcc
Q psy5844         107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVD  185 (442)
Q Consensus       107 Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~  185 (442)
                      |||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.++.|+.|  ++
T Consensus       156 GVV~~I~P~N~Pl~~~~~~~~~ALaaGN~VIlKPs~~tp~~~~~l~~ll~eaGlP~gvv~~v~g~~~~~~~~L~~~--~d  233 (524)
T PRK09407        156 GVVGVISPWNYPLTLAVSDAIPALLAGNAVVLKPDSQTPLTALAAVELLYEAGLPRDLWQVVTGPGPVVGTALVDN--AD  233 (524)
T ss_pred             eEEEEEeCCCChHHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHHHHHHHcCCCcccEEEEecCCchHHHHHHhc--CC
Confidence            999999999999999999999999999999999999999999999999999999999999999976 788889886  78


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|.||||+.+|+.|++.++ .+.+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus       234 ~V~fTGs~~~g~~v~~~aa-~~~~~v~lElGGknp~iV~~dADl~~Aa~~i~~~~f~~sGQ~C~a~~rv~V~~~v~d~f~  312 (524)
T PRK09407        234 YLMFTGSTATGRVLAEQAG-RRLIGFSLELGGKNPMIVLDDADLDKAAAGAVRACFSNAGQLCISIERIYVHESIYDEFV  312 (524)
T ss_pred             EEEEECCHHHHHHHHHHHH-hcCCcEEEECCCCceeEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHH
Confidence            9999999999999999888 589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-CCCcccccceeccCcchhHHHHH
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      ++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||.... .+|+|+.|||+.++++++.++.+
T Consensus       313 ~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~g~~~~Ptvl~~v~~~~~i~~e  392 (524)
T PRK09407        313 RAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLGPLFYEPTVLTGVTPDMELARE  392 (524)
T ss_pred             HHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCceEeCEEEeCCCCCChHHhC
Confidence            99999999999999999999999999999999999999999999999999987532 35799999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |+||||+.+..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       393 E~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~IN~~~~  452 (524)
T PRK09407        393 ETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVNVNEGYA  452 (524)
T ss_pred             CCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999999998654

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=100.00  E-value=4e-70  Score=559.63  Aligned_cols=372  Identities=34%  Similarity=0.557  Sum_probs=344.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc-ccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||..++.. |+..+++.+++++..+++..+... +.+.+...+.+++|+||
T Consensus        41 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  119 (452)
T cd07102          41 ERKAIVTRAVELLAANTDEIAEELTWQMGRPIAQAGG-EIRGMLERARYMISIAEEALADIRVPEKDGFERYIRREPLGV  119 (452)
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCeeEEEEEEeccE
Confidence            4445555554544556788899999999999999987 999999999999988876655432 22245567889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA  188 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~  188 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..|.++|.++|+|+|++|+++++++.+..|+.||.++.|.
T Consensus       120 v~~i~p~N~P~~~~~~~l~~ALaaGN~VVlKps~~~~~~~~~l~~~l~~aGlP~g~~~~v~g~~~~~~~L~~~~~v~~V~  199 (452)
T cd07102         120 VLIIAPWNYPYLTAVNAVIPALLAGNAVILKHSPQTPLCGERFAAAFAEAGLPEGVFQVLHLSHETSAALIADPRIDHVS  199 (452)
T ss_pred             EEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHhcCCCcCcEEEEeCCchhHHHHhcCCCCCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999998668889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++ ...+|+.+|+|||||+||++|||++.|++.+++++|+|+||.|+++++||||++++++|+++|
T Consensus       200 fTGs~~~g~~v~~~a~-~~~~~v~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~~~f~~~L  278 (452)
T cd07102         200 FTGSVAGGRAIQRAAA-GRFIKVGLELGGKDPAYVRPDADLDAAAESLVDGAFFNSGQSCCSIERIYVHESIYDAFVEAF  278 (452)
T ss_pred             EECcHHHHHHHHHHHH-hcCCcEEEECCCCCceEEcCCCCHHHHHHHHHHHHHHhCCCCCcCCcEEEEeHHHHHHHHHHH
Confidence            9999999999999888 689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc---CCCCcccccceeccCcchhHHHHHh
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA---GDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~---~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      +++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...   +..|+|+.|||+.++.++|.++++|
T Consensus       279 ~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~~Ptvl~~~~~~~~i~~~E  358 (452)
T cd07102         279 VAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYLAPTVLTNVDHSMRVMREE  358 (452)
T ss_pred             HHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceEcCEEEecCCCCChhhhcC
Confidence            9999999999999999999999999999999999999999999999998753   2468999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +||||++++.|++++|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       359 ~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~  416 (452)
T cd07102         359 TFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVFMNRCD  416 (452)
T ss_pred             CcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999875

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=100.00  E-value=3.9e-70  Score=561.74  Aligned_cols=371  Identities=31%  Similarity=0.491  Sum_probs=342.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+.++++.......++++.++++++.|+|||+.+++. |+..+++.+++++.......++..... .+...+.+++|+||
T Consensus        61 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~P~Gv  139 (477)
T TIGR01722        61 QRTSVLLRYQALLKEHRDEIAELITAEHGKTHSDALG-DVARGLEVVEHACGVNSLLKGETSTQVATRVDVYSIRQPLGV  139 (477)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceEEEEEcccce
Confidence            4455555555555566788899999999999999998 999999999999987766655443322 34456789999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA  188 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~  188 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|+.+.++.|+.||.++.|+
T Consensus       140 v~~I~p~N~P~~~~~~~~~~ALaaGN~VilKps~~~p~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~L~~~~~v~~V~  219 (477)
T TIGR01722       140 CAGITPFNFPAMIPLWMFPIAIACGNTFVLKPSEKVPSAAVKLAELFSEAGAPDGVLNVVHGDKEAVDRLLEHPDVKAVS  219 (477)
T ss_pred             EEEEccCChHHHHHHHHHHHHHhcCCEEEeeCcccChHHHHHHHHHHHHhCcCCCeEEEEeCCHHHHHHHHcCCCcCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999998667788999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ ..+||+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||+++ ++|+++|
T Consensus       220 ftGS~~~g~~v~~~a~-~~~~~v~lElGG~n~~iV~~dADl~~a~~~i~~~~f~~~GQ~C~a~~rl~v~~~~-~~f~~~l  297 (477)
T TIGR01722       220 FVGSTPIGRYIHTTGS-AHGKRVQALGGAKNHMVVMPDADKDAAADALVGAAYGAAGQRCMAISAAVLVGAA-DEWVPEI  297 (477)
T ss_pred             EECCHHHHHHHHHHHH-hcCCeEEEECCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeEEEEeCcH-HHHHHHH
Confidence            9999999999999887 5899999999999999999999999999999999999999999999999999998 9999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc--C--CCCcccccceeccCcchhHHHHH
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA--G--DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~--~--~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...  +  .+|+|+.|||+.++++++.++.+
T Consensus       298 ~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~Ptvl~~~~~~~~~~~e  377 (477)
T TIGR01722       298 RERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGPTLLERVPPTMKAYQE  377 (477)
T ss_pred             HHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECCEEeeCCCCCChhhhC
Confidence            9999999999999999999999999999999999999999999999998752  1  35899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+||||+.+..|++++|+++++|++++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus       378 E~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~  436 (477)
T TIGR01722       378 EIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVGVNVPI  436 (477)
T ss_pred             CCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999854

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=100.00  E-value=3.4e-70  Score=560.26  Aligned_cols=373  Identities=43%  Similarity=0.706  Sum_probs=346.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+.+++........+.++.+++++++|+|||..+++. |+..+++.+++++..+++..+...+.. .+...+.+++|+||
T Consensus        42 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  120 (451)
T cd07103          42 ERAAILRRWADLIRERAEDLARLLTLEQGKPLAEARG-EVDYAASFLEWFAEEARRIYGRTIPSPAPGKRILVIKQPVGV  120 (451)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceEEEEeeceE
Confidence            4445555554444555788899999999999999998 999999999999988776656544333 45678899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|+++++++++ +.++.|+.|+++|.|
T Consensus       121 v~~i~p~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~l~~aglP~g~v~~v~~~~~~~~~~l~~~~~vd~V  200 (451)
T cd07103         121 VAAITPWNFPAAMITRKIAPALAAGCTVVLKPAEETPLSALALAELAEEAGLPAGVLNVVTGSPAEIGEALCASPRVRKI  200 (451)
T ss_pred             EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHcCCCcccEEEEecCchhHHHHHhcCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999976 778899999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.+.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++
T Consensus       201 ~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~  279 (451)
T cd07103         201 SFTGSTAVGKLLMAQAA-DTVKRVSLELGGNAPFIVFDDADLDKAVDGAIASKFRNAGQTCVCANRIYVHESIYDEFVEK  279 (451)
T ss_pred             EEECCHHHHHHHHHHHH-hcCCcEEEECCCCCeEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCeeEEEcHHHHHHHHHH
Confidence            99999999999999888 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      |++.++++++|+|.++++++||+++..+++++.+++++++.+|+++++||.....+|+|+.|||+.++.+++.++.+|+|
T Consensus       280 l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Ptil~~~~~~~~~~~~E~f  359 (451)
T cd07103         280 LVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTVLTDVTDDMLIMNEETF  359 (451)
T ss_pred             HHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEEeeCCCCcCHHHhCCCC
Confidence            99999999999999999999999999999999999999999999999998765446899999999999999999999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |||++++.|++.+|+++++|+.+++|+++|||+|.+.+.++.+++++|.|+||++..
T Consensus       360 gPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~  416 (451)
T cd07103         360 GPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVGINTGLI  416 (451)
T ss_pred             CceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999998763

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=100.00  E-value=4.8e-70  Score=558.92  Aligned_cols=367  Identities=38%  Similarity=0.645  Sum_probs=341.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-----CCcceEEEee
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-----GDFFAYTRHE  104 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  104 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..++..+..     .+...+..++
T Consensus        44 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (453)
T cd07094          44 ERMAILERAADLLKKRAEEFAKIIACEGGKPIKDARV-EVDRAIDTLRLAAEEAERIRGEEIPLDATQGSDNRLAWTIRE  122 (453)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccCCCceEEEEEe
Confidence            4445555555555566788899999999999999998 999999999999988877655544332     2445678899


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCC
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPG  183 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~  183 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|++ +.++.|+.||+
T Consensus       123 P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~g~~~~v~g~~~~~~~~l~~~~~  202 (453)
T cd07094         123 PVGVVLAITPFNFPLNLVAHKLAPAIATGCPVVLKPASKTPLSALELAKILVEAGVPEGVLQVVTGEREVLGDAFAADER  202 (453)
T ss_pred             ccceEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCCCcCcEEEEeCCCchHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999977 77999999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      ++.|.||||+.+|+.|++.+   ..+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++
T Consensus       203 v~~V~fTGs~~~g~~v~~~a---~~~~~~lelGGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~i~V~~~i~d~  279 (453)
T cd07094         203 VAMLSFTGSAAVGEALRANA---GGKRIALELGGNAPVIVDRDADLDAAIEALAKGGFYHAGQVCISVQRIYVHEELYDE  279 (453)
T ss_pred             CCEEEEECcHHHHHHHHHHc---CCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhcCCCCcCCeEEEEeHHHHHH
Confidence            99999999999999999976   478999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHH
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||..   .++|+.||++.++++++.++.
T Consensus       280 f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~i~~  356 (453)
T cd07094         280 FIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGER---DGALFKPTVLEDVPRDTKLST  356 (453)
T ss_pred             HHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccC---CCeEEeCEEEeCCCCCChhhh
Confidence            99999999999999999999999999999999999999999999999999999864   578999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +|+||||++++.|++++|+++++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       357 ~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~iN~~~  416 (453)
T cd07094         357 EETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVMVNDSS  416 (453)
T ss_pred             CCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEEEcCCC
Confidence            999999999999999999999999999999999999999999999999999999999875

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=100.00  E-value=7.4e-70  Score=557.90  Aligned_cols=364  Identities=46%  Similarity=0.738  Sum_probs=337.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      +|..++........+.++.+++++++|+|||+.+++..|+..+++.+++++.+++...+          .+..++|+|||
T Consensus        82 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~----------~~~~~~P~GVV  151 (480)
T cd07111          82 VRARHLYRIARHIQKHQRLFAVLESLDNGKPIRESRDCDIPLVARHFYHHAGWAQLLDT----------ELAGWKPVGVV  151 (480)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcC----------CcccceecceE
Confidence            44555555555555556778999999999999999855999999999988877754422          23568999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++|+++.+..|+.||.++.|.|
T Consensus       152 ~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~l~~~~~v~~v~f  231 (480)
T cd07111         152 GQIVPWNFPLLMLAWKICPALAMGNTVVLKPAEYTPLTALLFAEICAEAGLPPGVLNIVTGNGSFGSALANHPGVDKVAF  231 (480)
T ss_pred             EEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHhcCCCcccEEEEeCCchHHHHHhcCCCcCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999987678889999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG  269 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~  269 (442)
                      |||+.+|+.|.+.++ .+++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus       232 tGs~~~g~~v~~~aa-~~~~~~~lElGGk~p~iV~~daDl~~aa~~i~~~~f~~~GQ~C~a~~ri~V~~~i~d~f~~~l~  310 (480)
T cd07111         232 TGSTEVGRALRRATA-GTGKKLSLELGGKSPFIVFDDADLDSAVEGIVDAIWFNQGQVCCAGSRLLVQESVAEELIRKLK  310 (480)
T ss_pred             ECCHHHHHHHHHHHh-ccCCcEEEEcCCCceEEECCCCCHHHHHHHHHHHHHhcCCCcCcCCceEEEcHHHHHHHHHHHH
Confidence            999999999999988 5899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCC
Q psy5844         270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP  349 (442)
Q Consensus       270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgP  349 (442)
                      ++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||...+..|+|+.|||+.++.+++.++.+|+|||
T Consensus       311 ~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~i~~eE~FgP  390 (480)
T cd07111         311 ERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFYPPTLFTNVPPASRIAQEEIFGP  390 (480)
T ss_pred             HHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeEEEecCCCCChhhcCCCCCC
Confidence            99999999999999999999999999999999999999999999998875445689999999999999999999999999


Q ss_pred             cccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       350 vl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       391 vl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~iN~~~~  445 (480)
T cd07111         391 VLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVWINGHNL  445 (480)
T ss_pred             eeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999998753

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=100.00  E-value=9.8e-70  Score=556.46  Aligned_cols=372  Identities=42%  Similarity=0.676  Sum_probs=340.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||..++...|+..+++.+++++..++...+...... .+...+.+++|+||
T Consensus        42 ~R~~~L~~~~~~l~~~~~~l~~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  121 (450)
T cd07092          42 ERSKALLKLADAIEENAEELAALESRNTGKPLHLVRDDELPGAVDNFRFFAGAARTLEGPAAGEYLPGHTSMIRREPIGV  121 (450)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCcHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCccCCCceeEEEEeccce
Confidence            34455555545455567888999999999999887655999999999999987766544322111 34456889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.+ |+|+|+++++++++ +.++.|+.||.++.|
T Consensus       122 v~~I~P~N~P~~~~~~~~~~AL~aGN~VIlKps~~~~~~~~~l~~~~~~-glP~g~~~~v~g~~~~~~~~l~~~~~v~~V  200 (450)
T cd07092         122 VAQIAPWNYPLMMAAWKIAPALAAGNTVVLKPSETTPLTTLLLAELAAE-VLPPGVVNVVCGGGASAGDALVAHPRVRMV  200 (450)
T ss_pred             EEEECCCCcHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHh-cCCcccEEEeecCchHHHHHHhcCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999 99999999999877 688999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++
T Consensus       201 ~fTGs~~~g~~v~~~a~-~~~~~~~lelgG~~p~iV~~dAdl~~aa~~iv~~~~~~~GQ~C~a~~~v~V~~~i~~~f~~~  279 (450)
T cd07092         201 SLTGSVRTGKKVARAAA-DTLKRVHLELGGKAPVIVFDDADLDAAVAGIATAGYYNAGQDCTAACRVYVHESVYDEFVAA  279 (450)
T ss_pred             EEECcHHHHHHHHHHHh-hcCCcEEEECCCCCeeEECCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEEeHHHHHHHHHH
Confidence            99999999999999988 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      |+++++++++|+|.++++++||++++.+++++.++|+++. +|+++++||...++.|+|+.||++.++..++.++.+|+|
T Consensus       280 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~-~ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~f  358 (450)
T cd07092         280 LVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAP-AHARVLTGGRRAEGPGYFYEPTVVAGVAQDDEIVQEEIF  358 (450)
T ss_pred             HHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHH-cCCEEEeCCCCCCCCccEEeeEEEEcCCCCChHHhCCCc
Confidence            9999999999999999999999999999999999999998 999999999765557899999999999999999999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |||+.++.|++++|+|+++|+.+++|+++|||+|.+.+.++++++++|.|++|+...
T Consensus       359 gPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~iN~~~~  415 (450)
T cd07092         359 GPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVWVNTHIP  415 (450)
T ss_pred             CceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999998653

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=100.00  E-value=1.4e-69  Score=555.88  Aligned_cols=371  Identities=43%  Similarity=0.733  Sum_probs=342.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCCh-hhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPY-NMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~-~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||+ .+++. |+..+++.+++++.+.....+...+...+...+..++|+||
T Consensus        42 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  120 (457)
T cd07108          42 ERGKLLARIADALEARSEELARLLALETGNALRTQARP-EAAVLADLFRYFGGLAGELKGETLPFGPDVLTYTVREPLGV  120 (457)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhcCCCcHHHHHH-HHHHHHHHHHHHHHHHHHhCCceeccCCCeeEEEEeecceE
Confidence            44555555555555667889999999999997 68887 99999999999998876665554433244556788999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++|++ +.++.|+.||+++.|
T Consensus       121 v~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~~-lP~~~~~~v~g~~~~~~~~L~~~~~vd~v  199 (457)
T cd07108         121 VGAILPWNAPLMLAALKIAPALVAGNTVVLKAAEDAPLAVLLLAEILAQV-LPAGVLNVITGYGEECGAALVDHPDVDKV  199 (457)
T ss_pred             EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHh-CCcCcEEEEeCCchHHHHHHhcCCCcCEE
Confidence            99999999999999999999999999999999999999999999999986 9999999999876 788999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHH-hhccCCCcccCCCEEEEcCccHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFG-LFFNMGQCCCAGSRTFVQDTIYDEFVA  266 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~-~~~~~Gq~C~s~~~v~V~~~~~~~f~~  266 (442)
                      .||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.++++ +|.|+||.|++++|||||++++|+|++
T Consensus       200 ~ftGs~~~g~~v~~~aa-~~l~~~~lelgG~~~~iV~~dAdl~~Aa~~iv~~~~f~~~GQ~C~a~~rv~V~~~i~~~f~~  278 (457)
T cd07108         200 TFTGSTEVGKIIYRAAA-DRLIPVSLELGGKSPMIVFPDADLDDAVDGAIAGMRFTRQGQSCTAGSRLFVHEDIYDAFLE  278 (457)
T ss_pred             EEECcHHHHHHHHHHHh-ccCCeEEEECCCCCeeEECCCCCHHHHHHHHHHhhHhhcCCCCCCCCeEEEEehHHHHHHHH
Confidence            99999999999999988 5899999999999999999999999999999999 599999999999999999999999999


Q ss_pred             HHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHh-cCCEEEeCCcccC----CCCcccccceeccCcchhHH
Q psy5844         267 RSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKS-QGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       267 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~  341 (442)
                      +|+++++++++|+|.++++++||++++.+++++.++++++++ +|+++++||....    ..|+|+.|||+.++.+++.+
T Consensus       279 ~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~~~g~~~~Ptvl~~~~~~~~~  358 (457)
T cd07108         279 KLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPLADGFFVQPTIFSGVDNEWRL  358 (457)
T ss_pred             HHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCCCCceEECCEEEecCCCCChh
Confidence            999999999999999999999999999999999999999998 8999999997642    36899999999999999999


Q ss_pred             HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +++|+||||++++.|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+..
T Consensus       359 ~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~iN~~~  420 (457)
T cd07108         359 AREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQVNQGG  420 (457)
T ss_pred             hhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999999875

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=100.00  E-value=1e-69  Score=556.37  Aligned_cols=367  Identities=34%  Similarity=0.579  Sum_probs=338.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-----CCcceEEEee
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-----GDFFAYTRHE  104 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  104 (442)
                      .+.++++.......+.++.+++++++|+|||+.+++. |+..++..+++++..+.+..++.....     .+...++.++
T Consensus        44 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (452)
T cd07147          44 RRAAILLHCVARLEERFEELAETIVLEAGKPIKDARG-EVARAIDTFRIAAEEATRIYGEVLPLDISARGEGRQGLVRRF  122 (452)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCcccccccccCCCCceeEEEEe
Confidence            4445555554444455788899999999999999998 999999999999987765544432211     2445678899


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCc
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGV  184 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v  184 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++++++++.+.+..|+.||++
T Consensus       123 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~l~~~l~~ag~P~g~v~~v~g~~~~~~~l~~~~~v  202 (452)
T cd07147         123 PIGPVSAITPFNFPLNLVAHKVAPAIAAGCPFVLKPASRTPLSALILGEVLAETGLPKGAFSVLPCSRDDADLLVTDERI  202 (452)
T ss_pred             ceeEEEEEcCCCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCcCcEEEEeCCccchhHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999866788999999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      +.|.||||+.+|+.|++.++   .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus       203 ~~v~fTGs~~~g~~v~~~a~---~~~v~lelgG~~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~f  279 (452)
T cd07147         203 KLLSFTGSPAVGWDLKARAG---KKKVVLELGGNAAVIVDSDADLDFAAQRIIFGAFYQAGQSCISVQRVLVHRSVYDEF  279 (452)
T ss_pred             CEEEEECCHHHHHHHHHHhC---cCceEeecCCCCcEEECCCCCHHHHHHHHHHHHHhccCCCCcCCcEEEEchhHHHHH
Confidence            99999999999999999776   269999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++|+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||..   +|+|+.||++.++.+++.++.+
T Consensus       280 ~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~---~g~~~~Ptvl~~~~~~~~~~~~  356 (452)
T cd07147         280 KSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKR---DGALLEPTILEDVPPDMEVNCE  356 (452)
T ss_pred             HHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCc---CCEEEcCEEEeCCCCCChHHhC
Confidence            9999999999999999999999999999999999999999999999999999865   4789999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+|||+++++.|++++|+|+++|+.+++|+++|||+|.+.+.++++++++|.|++|+..
T Consensus       357 E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~vN~~~  415 (452)
T cd07147         357 EVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVVINDVP  415 (452)
T ss_pred             cCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999865

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=100.00  E-value=1.2e-69  Score=550.58  Aligned_cols=367  Identities=26%  Similarity=0.388  Sum_probs=334.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-----CCcceEEEee
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-----GDFFAYTRHE  104 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  104 (442)
                      ++.+++++......+.++.+++++++|+|||+.+++..|+..+++.+++++..+++..+......     .+...++.++
T Consensus        28 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (436)
T cd07135          28 YRLWQLKQLYWAVKDNEEAIVEALKKDLGRPPFETLLTEVSGVKNDILHMLKNLKKWAKDEKVKDGPLAFMFGKPRIRKE  107 (436)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCcccCCcccccCCCceEEEec
Confidence            45556666655555567889999999999999999855999999999999988766533221111     2445788999


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCc
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGV  184 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v  184 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.+ |+|+|++++++|+++....|+.|| +
T Consensus       108 P~Gvv~~I~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~l~~l~~~-~lP~g~v~vv~g~~~~~~~l~~~~-v  185 (436)
T cd07135         108 PLGVVLIIGPWNYPVLLALSPLVGAIAAGCTVVLKPSELTPHTAALLAELVPK-YLDPDAFQVVQGGVPETTALLEQK-F  185 (436)
T ss_pred             cCcEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHH-hCCcCEEEEEcCCchhHHHHHhCC-C
Confidence            99999999999999999999999999999999999999999999999999999 699999999998764445699999 9


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      +.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus       186 d~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dADl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~f  264 (436)
T cd07135         186 DKIFYTGSGRVGRIIAEAAA-KHLTPVTLELGGKSPVIVTKNADLELAAKRILWGKFGNAGQICVAPDYVLVDPSVYDEF  264 (436)
T ss_pred             CEEEEECCcHHHHHHHHHHH-hcCCCeEEEccCCCcEEECCCCCHHHHHHHHHHHHhccCCceecCCCEEeccHHHHHHH
Confidence            99999999999999999887 58999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++|++.++++++|+| ++++++||+++..+++++.++++++   |+++++||... ++|+|+.|||+.++++++.++.+
T Consensus       265 ~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~i~~~v~~a---g~~v~~gg~~~-~~g~~~~Ptvl~~~~~~~~~~~~  339 (436)
T cd07135         265 VEELKKVLDEFYPGGA-NASPDYTRIVNPRHFNRLKSLLDTT---KGKVVIGGEMD-EATRFIPPTIVSDVSWDDSLMSE  339 (436)
T ss_pred             HHHHHHHHHHhcCCCC-CCCCCcCCCCCHHHHHHHHHHHHhc---CCeEEECCCcC-CCCCEEccEEEecCCCccHHHhc
Confidence            9999999999999999 8999999999999999999999886   88999998764 36899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |+||||++++.|++++|+|+++|+.+++|+++|||+|.+.+.++++++++|.|+||+...
T Consensus       340 E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~iN~~~~  399 (436)
T cd07135         340 ELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVVINDTLI  399 (436)
T ss_pred             cccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEEECCccc
Confidence            999999999999999999999999999999999999999999999999999999998754

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=100.00  E-value=1.4e-69  Score=552.78  Aligned_cols=371  Identities=40%  Similarity=0.674  Sum_probs=344.5

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      ++.+++++......+.++.+++++++|+|||..++.. |+..+++.+++++..+.+..+...+.. .+...+.+++|+||
T Consensus        23 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GV  101 (431)
T cd07104          23 ERAAILRKAAEILEERRDEIADWLIRESGSTRPKAAF-EVGAAIAILREAAGLPRRPEGEILPSDVPGKESMVRRVPLGV  101 (431)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEEEeeeee
Confidence            4555666665555566788999999999999999998 999999999999988766555444433 45677899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHH-HHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLT-ALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK  186 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~-~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~  186 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.+ +..+.++|.++|+|+|+++++++++ +.++.|+.||+++.
T Consensus       102 v~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~l~~~l~~aGlP~gvv~~v~g~~~~~~~~L~~~~~i~~  181 (431)
T cd07104         102 VGVISPFNFPLILAMRSVAPALALGNAVVLKPDSRTPVTGGLLIAEIFEEAGLPKGVLNVVPGGGSEIGDALVEHPRVRM  181 (431)
T ss_pred             EEEECCCCcHHHHHHHHHHHHHHcCCeEEeeCCCCChHHHHHHHHHHHHHcCCCcccEEEeeCCchhHHHHHhcCCCCCE
Confidence            999999999999999999999999999999999999987 5789999999999999999999977 68899999999999


Q ss_pred             EeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHH
Q psy5844         187 VAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVA  266 (442)
Q Consensus       187 v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~  266 (442)
                      |.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus       182 V~ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~~~f~~  260 (431)
T cd07104         182 ISFTGSTAVGRHIGELAG-RHLKKVALELGGNNPLIVLDDADLDLAVSAAAFGAFLHQGQICMAAGRILVHESVYDEFVE  260 (431)
T ss_pred             EEEECCHHHHHHHHHHHh-hcCCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEcHHHHHHHHH
Confidence            999999999999999888 5899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844         267 RSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       267 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      +|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||..   +|+|+.||++.++.+++.++.+|+
T Consensus       261 ~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~---~g~~~~Ptvl~~~~~~~~~~~eE~  337 (431)
T cd07104         261 KLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTY---EGLFYQPTVLSDVTPDMPIFREEI  337 (431)
T ss_pred             HHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCceECCEEeecCCCCChhhhCcC
Confidence            99999999999999999999999999999999999999999999999999864   578999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      ||||+.++.|++.+|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||++...
T Consensus       338 fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~  396 (431)
T cd07104         338 FGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVHINDQTVN  396 (431)
T ss_pred             cCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEEECCCCCC
Confidence            99999999999999999999999999999999999999999999999999999988743

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=100.00  E-value=1.2e-69  Score=550.50  Aligned_cols=372  Identities=28%  Similarity=0.442  Sum_probs=334.3

Q ss_pred             ccccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc-ccccC---CCc
Q psy5844          22 AAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPIN---GDF   97 (442)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~   97 (442)
                      |..+++..| ..+++.......+.++.+++++++|+|||+.+++..|+..+++.+++++..++...+. .....   .+.
T Consensus        14 W~~~~~~~R-~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (449)
T cd07136          14 GATKDVEFR-IEQLKKLKQAIKKYENEILEALKKDLGKSEFEAYMTEIGFVLSEINYAIKHLKKWMKPKRVKTPLLNFPS   92 (449)
T ss_pred             cCCCCHHHH-HHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccCCccccCCc
Confidence            444554444 4444444444445578899999999999999997559999999999999887665443 22211   245


Q ss_pred             ceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhh
Q psy5844          98 FAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAA  177 (442)
Q Consensus        98 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~  177 (442)
                      ..+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|+++|+.+.+..
T Consensus        93 ~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~vi~Kps~~tp~~~~~l~~~~~~a-lP~gv~~~v~g~~~~~~~  171 (449)
T cd07136          93 KSYIYYEPYGVVLIIAPWNYPFQLALAPLIGAIAAGNTAVLKPSELTPNTSKVIAKIIEET-FDEEYVAVVEGGVEENQE  171 (449)
T ss_pred             eeEEEEecCeEEEEECCCchHHHHHHHHHHHHHhcCCEEEEECcccchHHHHHHHHHHHHh-CCCCEEEEEeCChHHHHH
Confidence            6789999999999999999999999999999999999999999999999999999999998 999999999986577888


Q ss_pred             hhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEc
Q psy5844         178 LVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQ  257 (442)
Q Consensus       178 l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~  257 (442)
                      |+.|+ ++.|.||||+.+|+.|++.++ ..++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||
T Consensus       172 L~~~~-v~~V~fTGS~~~g~~i~~~aa-~~~~~v~lElgGknp~iV~~dADld~aa~~i~~~~~~~~GQ~C~a~~rv~V~  249 (449)
T cd07136         172 LLDQK-FDYIFFTGSVRVGKIVMEAAA-KHLTPVTLELGGKSPCIVDEDANLKLAAKRIVWGKFLNAGQTCVAPDYVLVH  249 (449)
T ss_pred             HhcCC-CCEEEEECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEECCCCCHHHHHHHHHHHHHcccCCcccCCCEEEEc
Confidence            88776 999999999999999999888 5889999999999999999999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcc
Q psy5844         258 DTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRD  337 (442)
Q Consensus       258 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~  337 (442)
                      ++++|+|+++|+++++++++|+|.+ ++++||++++.+.+++.++++++     ++++||... .+|+|+.||++.++++
T Consensus       250 ~~i~d~f~~~L~~~~~~~~~g~p~~-~~~~gpli~~~~~~~i~~~i~~a-----~~~~gG~~~-~~g~~~~Ptvl~~v~~  322 (449)
T cd07136         250 ESVKEKFIKELKEEIKKFYGEDPLE-SPDYGRIINEKHFDRLAGLLDNG-----KIVFGGNTD-RETLYIEPTILDNVTW  322 (449)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCCCC-CCCccCcCCHHHHHHHHHHHhcc-----eEEECCCcC-CCCCEEeeEEEecCCC
Confidence            9999999999999999999999998 89999999999999999999763     799998753 3689999999999999


Q ss_pred             hhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         338 DMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       338 ~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ++.++++|+||||+.++.|++++|+|+++|+.+++|+++|||+|.+.+.++++++++|.|++|+...
T Consensus       323 ~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~  389 (449)
T cd07136         323 DDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGCINDTIM  389 (449)
T ss_pred             cChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence            9999999999999999999999999999999999999999999999999999999999999998653

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=100.00  E-value=2.1e-69  Score=555.94  Aligned_cols=368  Identities=27%  Similarity=0.347  Sum_probs=326.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcC--------cccccCC-C-cce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG--------KTIPING-D-FFA   99 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~--------~~~~~~~-~-~~~   99 (442)
                      .|.+++++......+.++.++++ ++|+|||+.+++. |+..+++.++|++.++++..+        +..+... + ...
T Consensus        60 ~Ra~~L~~~a~~l~~~~~~la~l-~~e~Gkp~~ea~~-Ev~~~~~~~~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  137 (513)
T cd07128          60 ERAAMLKALAKYLMERKEDLYAL-SAATGATRRDSWI-DIDGGIGTLFAYASLGRRELPNAHFLVEGDVEPLSKDGTFVG  137 (513)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHH-HHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhccccccccCCcccccCCCccccc
Confidence            44555555555555556777886 8999999999998 999999999999988866542        2222211 2 135


Q ss_pred             EEEeec-cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhC-CCCCcEEeecCCc-cchh
Q psy5844         100 YTRHEP-VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG-IPEGVVNIVPGYG-DAGA  176 (442)
Q Consensus       100 ~~~~~P-~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~ag-lp~~~~~~v~~~~-~~~~  176 (442)
                      ++.++| +|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++| +|+|++|+++|++ +.+.
T Consensus       138 ~~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~~~~eaG~lP~gv~~~v~g~~~~~~~  217 (513)
T cd07128         138 QHILTPRRGVAVHINAFNFPVWGMLEKFAPALLAGVPVIVKPATATAYLTEAVVKDIVESGLLPEGALQLICGSVGDLLD  217 (513)
T ss_pred             eEEEEecccEEEEECCcccHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCCCCCCcEEEecCChHHHhc
Confidence            678999 599999999999999999999999999999999999999999999999999999 8999999999865 4444


Q ss_pred             hhhcCCCccEEeecCCHHHHHHHHhhcc-CCCCceeeeecCCCCceEEeCCCC-----HHHHHHHHHHHhhccCCCcccC
Q psy5844         177 ALVQHPGVDKVAFTGSTEVGKLVQQGSG-ASNLKRTTLELGGKSPNIIFADAD-----LDAAVEGAHFGLFFNMGQCCCA  250 (442)
Q Consensus       177 ~l~~~~~v~~v~ftGs~~~~~~i~~~~~-~~~~~~~~~e~gG~~~~iV~~dad-----~~~a~~~i~~~~~~~~Gq~C~s  250 (442)
                      .+   +.++.|.||||+.+|+.|++.++ ..+++|+++|+|||||+||++|||     ++.+++.+++++|.|+||.|++
T Consensus       218 ~l---~~~d~v~fTGS~~~G~~i~~~a~~a~~~~~~~lElGGknp~IV~~DAd~~~~dld~aa~~iv~~~f~~aGQ~C~a  294 (513)
T cd07128         218 HL---GEQDVVAFTGSAATAAKLRAHPNIVARSIRFNAEADSLNAAILGPDATPGTPEFDLFVKEVAREMTVKAGQKCTA  294 (513)
T ss_pred             cc---CCCCEEEEECCHHHHHHHHHHhhhhccCceEEEeccCcCcEEECCCCCcchhhHHHHHHHHHHHHHHhcCCcccC
Confidence            33   56899999999999999998752 258899999999999999999999     9999999999999999999999


Q ss_pred             CCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc-------CCC
Q psy5844         251 GSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA-------GDK  323 (442)
Q Consensus       251 ~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-------~~~  323 (442)
                      ++|||||++++++|+++|+++++++++|+|.|+++++|||+++.+++++.++|++++.. +++++||...       ...
T Consensus       295 ~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~-A~vl~GG~~~~~~~~~~~~~  373 (513)
T cd07128         295 IRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAE-AEVVFGGPDRFEVVGADAEK  373 (513)
T ss_pred             CceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhC-CEEEECCCccccccCCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999988 9999999652       135


Q ss_pred             CcccccceeccCcc--hhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccE--eeeEEe
Q psy5844         324 GFYVQPTVFANVRD--DMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR--AGTLIR  399 (442)
Q Consensus       324 g~~v~pti~~~~~~--~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~--~G~V~v  399 (442)
                      |+|+.|||+.++.+  ++.++.+|+||||+++.+|++.+|+++++|++.++|+++|||+|.+.+.+++++++  +|.|+|
T Consensus       374 g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~G~v~I  453 (513)
T cd07128         374 GAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYHGRLLV  453 (513)
T ss_pred             CEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhCCEEEE
Confidence            89999999998876  47899999999999999999999999999999999999999999999999999997  999999


Q ss_pred             eCCH
Q psy5844         400 FSSI  403 (442)
Q Consensus       400 N~~~  403 (442)
                      |+..
T Consensus       454 N~~~  457 (513)
T cd07128         454 LNRD  457 (513)
T ss_pred             cCCc
Confidence            9754

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=100.00  E-value=2.8e-69  Score=547.16  Aligned_cols=369  Identities=27%  Similarity=0.391  Sum_probs=335.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcc---ccc-CCCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT---IPI-NGDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~P  105 (442)
                      .+..++++......+.++.+++++++|+|||+.++...|+..+++.+++++..+.+..+..   .+. ......++.++|
T Consensus        22 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~P  101 (432)
T cd07137          22 WRKSQLKGLLRLVDENEDDIFAALRQDLGKPSAESFRDEVSVLVSSCKLAIKELKKWMAPEKVKTPLTTFPAKAEIVSEP  101 (432)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCCcccCCceeEEEEec
Confidence            4555666665666677889999999999999999975599999999999998775544321   111 122346789999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD  185 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~  185 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++ +|+|++|+++|+.+.+..|+.| .++
T Consensus       102 ~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~~~~~-~P~gvv~~v~g~~~~~~~L~~~-~i~  179 (432)
T cd07137         102 LGVVLVISAWNFPFLLSLEPVIGAIAAGNAVVLKPSELAPATSALLAKLIPEY-LDTKAIKVIEGGVPETTALLEQ-KWD  179 (432)
T ss_pred             CcEEEEEcCCchHHHHHHHHHHHHHhcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeCCHHHHHHHHhC-CCC
Confidence            99999999999999999999999999999999999999999999999999995 9999999999955788889887 599


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhh-ccCCCcccCCCEEEEcCccHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLF-FNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~-~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      .|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++| .|+||.|++++|+|||++++|+|
T Consensus       180 ~v~fTGs~~~g~~v~~~aa-~~~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~f~~~~GQ~C~a~~rv~V~~~i~d~f  258 (432)
T cd07137         180 KIFFTGSPRVGRIIMAAAA-KHLTPVTLELGGKCPVIVDSTVDLKVAVRRIAGGKWGCNNGQACIAPDYVLVEESFAPTL  258 (432)
T ss_pred             EEEEECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEEcCCCCHHHHHHHHHHHhhhccCCCcccCCCEEEEcHHHHHHH
Confidence            9999999999999999888 589999999999999999999999999999999999 59999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++|.++++++++|+| ++++++||++++.+++++.+++++++. |+++++||.. +.+|+|+.|||+.++++++.++++
T Consensus       259 ~~~l~~~~~~~~~g~p-~~~~~~gpli~~~~~~~v~~~i~~a~~-ga~~l~gg~~-~~~g~~~~Ptvl~~~~~~~~~~~e  335 (432)
T cd07137         259 IDALKNTLEKFFGENP-KESKDLSRIVNSHHFQRLSRLLDDPSV-ADKIVHGGER-DEKNLYIEPTILLDPPLDSSIMTE  335 (432)
T ss_pred             HHHHHHHHHHHhCCCC-CccCCcCCcCCHHHHHHHHHHHHHHHh-CCeEEeCCCc-CCCCCEEeeEEEecCCCcchhhhc
Confidence            9999999999999999 568999999999999999999999998 8999999865 346899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |+||||++++.|++++|+|+++|+++++|+++|||+|.+.+.++++++++|.|++|+...
T Consensus       336 E~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~  395 (432)
T cd07137         336 EIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVTFNDTVV  395 (432)
T ss_pred             ccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEEECCccc
Confidence            999999999999999999999999999999999999999999999999999999998653

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>PLN02203 aldehyde dehydrogenase

Probab=100.00  E-value=3.2e-69  Score=550.99  Aligned_cols=369  Identities=25%  Similarity=0.339  Sum_probs=335.7

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcc---ccc-CCCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT---IPI-NGDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~~P  105 (442)
                      .+..+++.......+.++.+++++++|+|||+.++...|+..+++.+++++...++..+..   .+. ..+...++.++|
T Consensus        29 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~reP  108 (484)
T PLN02203         29 WRKSQLKGLLRLLKDNEEAIFKALHQDLGKHRVEAYRDEVGVLTKSANLALSNLKKWMAPKKAKLPLVAFPATAEVVPEP  108 (484)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhccccccCCcccCCceeEEEEec
Confidence            4555556665656666899999999999999999964499999999999998776654431   121 134467899999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD  185 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~  185 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|+|++|+++|+.+.++.|+.|+ ++
T Consensus       109 ~GVv~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~~-lP~gvv~vv~g~~~~~~~l~~~~-vd  186 (484)
T PLN02203        109 LGVVLIFSSWNFPIGLSLEPLIGAIAAGNAVVLKPSELAPATSAFLAANIPKY-LDSKAVKVIEGGPAVGEQLLQHK-WD  186 (484)
T ss_pred             ccEEEEEcCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCEEEEEeCCHHHHHHHHhCC-CC
Confidence            99999999999999999999999999999999999999999999999999996 99999999998558899999995 99


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeC---CCCHHHHHHHHHHHhhc-cCCCcccCCCEEEEcCccH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA---DADLDAAVEGAHFGLFF-NMGQCCCAGSRTFVQDTIY  261 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~---dad~~~a~~~i~~~~~~-~~Gq~C~s~~~v~V~~~~~  261 (442)
                      .|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++   |||++.|++.+++++|. |+||.|++++|+|||++++
T Consensus       187 ~v~fTGS~~~G~~v~~~aa-~~l~~v~lElGGknp~iV~~d~~daDl~~aa~~i~~~~f~~~aGQ~C~a~~rv~V~~~i~  265 (484)
T PLN02203        187 KIFFTGSPRVGRIIMTAAA-KHLTPVALELGGKCPCIVDSLSSSRDTKVAVNRIVGGKWGSCAGQACIAIDYVLVEERFA  265 (484)
T ss_pred             EEEEECCHHHHHHHHHHHH-hcCCCEEEEecCCCeEEEccCCCCCCHHHHHHHHHHHhcccCCCCccccCCeEEEcHHHH
Confidence            9999999999999999988 58999999999999999997   69999999999999995 8999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHH
Q psy5844         262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~  341 (442)
                      |+|+++|.+.++++++|+|.++ +++||+++..+++++.++|++++.. +++++||.. +++|+|+.|||+.++++++.+
T Consensus       266 d~f~~~L~~~~~~~~~G~p~~~-~~~Gpli~~~~~~~v~~~i~~a~~~-~~~~~gg~~-~~~g~~i~PTvl~~v~~d~~i  342 (484)
T PLN02203        266 PILIELLKSTIKKFFGENPRES-KSMARILNKKHFQRLSNLLKDPRVA-ASIVHGGSI-DEKKLFIEPTILLNPPLDSDI  342 (484)
T ss_pred             HHHHHHHHHHHHHhcCCCCCcC-CCcCCCCCHHHHHHHHHHHHHHHhC-CeEEeCCCc-CCCCCEEeeEEEecCCCCCHH
Confidence            9999999999999999999986 6899999999999999999999876 688888865 346899999999999999999


Q ss_pred             HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +.+|+||||+++..|++++|+|+++|++++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       343 ~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~IN~~~~  405 (484)
T PLN02203        343 MTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVTFNDAII  405 (484)
T ss_pred             HhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCccc
Confidence            999999999999999999999999999999999999999999999999999999999998743

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=100.00  E-value=3.8e-69  Score=548.51  Aligned_cols=368  Identities=37%  Similarity=0.557  Sum_probs=337.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+.+++.+......+.++.+++++++|+|||..++.. |+..+++.+++++...++..+...+.. .+...+.+++|+||
T Consensus        23 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~~~~-ei~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  101 (432)
T cd07105          23 ERRDILLKAADLLESRRDEFIEAMMEETGATAAWAGF-NVDLAAGMLREAASLITQIIGGSIPSDKPGTLAMVVKEPVGV  101 (432)
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCceeEEEEecceE
Confidence            4455555554544556788999999999999989988 999999999999988765533333322 34557889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc----cchhhhhcCCCc
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG----DAGAALVQHPGV  184 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~----~~~~~l~~~~~v  184 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++|+|+|++|+++++.    ++++.|+.||++
T Consensus       102 V~~I~p~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~~~~~aGlP~gv~~~v~g~~~~~~~~~~~l~~~~~v  181 (432)
T cd07105         102 VLGIAPWNAPVILGTRAIAYPLAAGNTVVLKASELSPRTHWLIGRVFHEAGLPKGVLNVVTHSPEDAPEVVEALIAHPAV  181 (432)
T ss_pred             EEEECCcCcHHHHHHHHHHHHHhcCCEEEEECCccChHHHHHHHHHHHHcCcCCCcEEEEeCCCCchHHHHHHHhcCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999853    468899999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      +.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|+++++||||++++|+|
T Consensus       182 ~~v~ftGs~~~g~~i~~~aa-~~~~~~~lElgGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~~~f  260 (432)
T cd07105         182 RKVNFTGSTRVGRIIAETAA-KHLKPVLLELGGKAPAIVLEDADLDAAANAALFGAFLNSGQICMSTERIIVHESIADEF  260 (432)
T ss_pred             CEEEEECCHHHHHHHHHHHH-hcCCeEEEeCCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCcCCceEEEcHHHHHHH
Confidence            99999999999999999888 68999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-CCCcccccceeccCcchhHHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      +++|.++++++++|     ++++||++++.+++++.+++++++.+|+++++||.... ..++|+.||++.++.+++.++.
T Consensus       261 ~~~l~~~~~~~~~g-----~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptvl~~~~~~~~~~~  335 (432)
T cd07105         261 VEKLKAAAEKLFAG-----PVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTILDNVTPDMDIYS  335 (432)
T ss_pred             HHHHHHHHHhhcCC-----CCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEEEecCCCCCHHHh
Confidence            99999999999998     58999999999999999999999999999999987643 4689999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +|+||||++++.|++.+|+++++|+.+++|+++|||+|.+.+.++++++++|.|++|++..
T Consensus       336 eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~vN~~~~  396 (432)
T cd07105         336 EESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVHINGMTV  396 (432)
T ss_pred             CCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999999998764

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=100.00  E-value=8.9e-69  Score=551.00  Aligned_cols=373  Identities=32%  Similarity=0.480  Sum_probs=339.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc-ccccC---CCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPIN---GDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P  105 (442)
                      ++.+++........++++.+++++++|+|||+.++...|+..+++.+++++..+++.... ..+..   .+...+++++|
T Consensus        41 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  120 (465)
T cd07098          41 ERRKVLRSLLKYILENQEEICRVACRDTGKTMVDASLGEILVTCEKIRWTLKHGEKALRPESRPGGLLMFYKRARVEYEP  120 (465)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCceeEEEEec
Confidence            455666666565566788899999999999999997669999999999998776553322 11111   13446788999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHH----HHHhCCCCCcEEeecCCccchhhhhcC
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGAL----IAEAGIPEGVVNIVPGYGDAGAALVQH  181 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~----l~~aglp~~~~~~v~~~~~~~~~l~~~  181 (442)
                      +|||++|+|||||+..+++++++||++||+||+|||+.+|+++..++++    |.++|+|+|++|+++|+++.++.|+.|
T Consensus       121 ~GVv~~I~p~n~P~~~~~~~~~~ALaaGN~VIlKps~~~p~~~~~~~~~~~~~l~~aGlP~gvv~~v~g~~~~~~~L~~~  200 (465)
T cd07098         121 LGVVGAIVSWNYPFHNLLGPIIAALFAGNAIVVKVSEQVAWSSGFFLSIIRECLAACGHDPDLVQLVTCLPETAEALTSH  200 (465)
T ss_pred             ceeEEEEcccCcHHHHHHHHHHHHHHcCCEEEEECCCcCcHHHHHHHHHHHHHHHhcCCCCCeEEEEECCHHHHHHHhcC
Confidence            9999999999999999999999999999999999999999999876555    468899999999999966889999999


Q ss_pred             CCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH
Q psy5844         182 PGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY  261 (442)
Q Consensus       182 ~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~  261 (442)
                      |+++.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++
T Consensus       201 ~~v~~V~ftGs~~~g~~v~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~  279 (465)
T cd07098         201 PVIDHITFIGSPPVGKKVMAAAA-ESLTPVVLELGGKDPAIVLDDADLDQIASIIMRGTFQSSGQNCIGIERVIVHEKIY  279 (465)
T ss_pred             CCCCEEEEECCHHHHHHHHHHHH-hcCCeEEEECCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEcHHHH
Confidence            99999999999999999999988 58999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcc
Q psy5844         262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRD  337 (442)
Q Consensus       262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~  337 (442)
                      |+|+++|+++++.+++|+|.++++++||++++.+++++.+++++++.+|+++++||....    ..|+|+.|+|+.++.+
T Consensus       280 d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~~Ptvl~~~~~  359 (465)
T cd07098         280 DKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYFPPTLLVDVTP  359 (465)
T ss_pred             HHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEEcCEEEeCCCC
Confidence            999999999999999999999999999999999999999999999999999999986532    2589999999999999


Q ss_pred             hhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         338 DMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       338 ~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ++.++.+|+||||++++.|++.+|+++++|+.++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus       360 ~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~iN~~~  425 (465)
T cd07098         360 DMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVAINDFG  425 (465)
T ss_pred             CCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEECCCC
Confidence            999999999999999999999999999999999999999999999999999999999999999854

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=100.00  E-value=7.5e-69  Score=566.66  Aligned_cols=367  Identities=24%  Similarity=0.307  Sum_probs=328.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhc--------CcccccC-C-Ccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIH--------GKTIPIN-G-DFFA   99 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~--------~~~~~~~-~-~~~~   99 (442)
                      +|.+++++......+.++.+++ +++|+|||+.+++. |+..+++.+++++..+++..        ++..+.. . +...
T Consensus        60 eR~~~L~~~a~~l~~~~~ela~-~~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~  137 (663)
T TIGR02278        60 ERARMLKALAQYLSERKEALYA-LAATTGATRRDNWV-DIDGGIGTLFTYSSLGRRELPDANLIPEDEFEPLSKDGSFQG  137 (663)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHH-HHHHcCCCHHHHHH-HHHHHHHHHHHHHHhhhhhccccccccCCceeccCCCCccce
Confidence            4555566665666666777788 59999999999998 99999999999998876532        3222221 1 2346


Q ss_pred             EEEeecc-ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhC-CCCCcEEeecCCccchhh
Q psy5844         100 YTRHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG-IPEGVVNIVPGYGDAGAA  177 (442)
Q Consensus       100 ~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~ag-lp~~~~~~v~~~~~~~~~  177 (442)
                      ++.++|+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++| +|+|++|+++|+.  ...
T Consensus       138 ~~~~~P~~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~Vv~KPs~~tp~~~~~l~~~~~~aG~lP~gv~~~v~g~~--~~~  215 (663)
T TIGR02278       138 RHILTPKGGVAVQINAFNFPVWGLLEKFAPAFLAGVPTLAKPATPTAYVAEALVRTMVESGLLPEGSLQLICGSA--GDL  215 (663)
T ss_pred             EEEEEeCCceEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCcEEEEeCCh--HHH
Confidence            8999998 99999999999999999999999999999999999999999999999999999 9999999999853  222


Q ss_pred             hhcCCCccEEeecCCHHHHHHHHhhcc-CCCCceeeeecCCCCceEEeCCCC-----HHHHHHHHHHHhhccCCCcccCC
Q psy5844         178 LVQHPGVDKVAFTGSTEVGKLVQQGSG-ASNLKRTTLELGGKSPNIIFADAD-----LDAAVEGAHFGLFFNMGQCCCAG  251 (442)
Q Consensus       178 l~~~~~v~~v~ftGs~~~~~~i~~~~~-~~~~~~~~~e~gG~~~~iV~~dad-----~~~a~~~i~~~~~~~~Gq~C~s~  251 (442)
                      +..++.++.|.||||+.+|+.|++.++ ..+++|+++|+|||||+||++|||     ++.|++.+++++|.|+||.|+++
T Consensus       216 ~~~~~~~~~V~FTGS~~~G~~i~~~aaaa~~~~~~~lELGGk~p~IV~~dAd~~~~dl~~aa~~i~~~~f~~sGQ~C~a~  295 (663)
T TIGR02278       216 LDHLDHRDVVAFTGSAATADRLRAHPNVLERGIRFNAEADSLNAAILGEDATPDEPEFDLFAQEIVRELTIKAGQKCTAI  295 (663)
T ss_pred             HhcCCCCCEEEEECCHHHHHHHHHhHhHHhcCceEEEEcCCCCeEEEcCCCCccchhHHHHHHHHHHHHHhcCCCCccCC
Confidence            333367899999999999999998642 258899999999999999999999     99999999999999999999999


Q ss_pred             CEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccce
Q psy5844         252 SRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTV  331 (442)
Q Consensus       252 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti  331 (442)
                      +|||||++++|+|+++|.++++++++|+|.|+++++||++++.+++++.++|++++++|+++++||... .+|+|+.|||
T Consensus       296 ~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~-~~g~~~~PTv  374 (663)
T TIGR02278       296 RRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGR-LDGAFFPPTL  374 (663)
T ss_pred             ceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcC-CCCeeEccEE
Confidence            999999999999999999999999999999999999999999999999999999999999999999753 3589999999


Q ss_pred             eccCcchh-HHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhcccc--EeeeEEe-eC
Q psy5844         332 FANVRDDM-KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL--RAGTLIR-FS  401 (442)
Q Consensus       332 ~~~~~~~~-~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~--~~G~V~v-N~  401 (442)
                      +.++.+++ .++++|+||||++++.|++.+|+++++|++.+||+++|||+|.+.+.++++++  ++|.|+| |.
T Consensus       375 l~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~InN~  448 (663)
T TIGR02278       375 LLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLHILNR  448 (663)
T ss_pred             EeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEEECCC
Confidence            99888775 78899999999999999999999999999999999999999999999999999  8999999 64

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=100.00  E-value=9.2e-69  Score=550.03  Aligned_cols=375  Identities=46%  Similarity=0.805  Sum_probs=346.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.+++........+.++.+++++++|+|||..++...|+..+++.++++++...+..+...+.+.+...+.+++|+|||
T Consensus        42 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~~~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  121 (455)
T cd07093          42 ERARILHKVADLIEARADELALLESLDTGKPITLARTRDIPRAAANFRFFADYILQLDGESYPQDGGALNYVLRQPVGVA  121 (455)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCHHHHHHHHHHHHHHHHHHHHHhHHHhCCccccCCCCceEEEEEEeeeEE
Confidence            44555555555556667888999999999999998766999999999999987765544433333466778999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++++++|++ +.++.|+.|++++.|.
T Consensus       122 ~~i~p~N~P~~~~~~~~~~AL~aGN~VIlkps~~~p~~~~~l~~~l~~aglP~g~v~~v~g~~~~~~~~L~~~~~i~~V~  201 (455)
T cd07093         122 GLITPWNLPLMLLTWKIAPALAFGNTVVLKPSEWTPLTAWLLAELANEAGLPPGVVNVVHGFGPEAGAALVAHPDVDLIS  201 (455)
T ss_pred             EEECCCChHHHHHHHHHHHHHhcCCEEEeECCCcCcHHHHHHHHHHHhcCCCccceEEEecCchHHHHHHhcCCCccEEE
Confidence            999999999999999999999999999999999999999999999999999999999999976 8889999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|.+.++ .+++|+++|+||+||+||++|||++.|++.+++++|.|+||.|+++++||||++++|+|+++|
T Consensus       202 ftGs~~~g~~v~~~aa-~~~~~~~lelgG~~~~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l  280 (455)
T cd07093         202 FTGETATGRTIMRAAA-PNLKPVSLELGGKNPNIVFADADLDRAVDAAVRSSFSNNGEVCLAGSRILVQRSIYDEFLERF  280 (455)
T ss_pred             EECCHHHHHHHHHHHh-hcccceEeecCCCCceEECCCCCHHHHHHHHHHHHHhccCCCcCCCceEEEcHHHHHHHHHHH
Confidence            9999999999999988 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHHH
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++++++++|+|.|+++++||+++..+.+++.+++++++..|+++++||....    +.++|+.||++.++.+++.++.+
T Consensus       281 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~~~~Ptvl~~~~~~~~~~~~  360 (455)
T cd07093         281 VERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGYFVEPTVITGLDNDSRVAQE  360 (455)
T ss_pred             HHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCceECCEEEecCCCCChHHhC
Confidence            99999999999999999999999999999999999999999999999997643    35889999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      |+||||++++.|++.+|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+....
T Consensus       361 E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~iN~~~~~  421 (455)
T cd07093         361 EIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVWVNCWLVR  421 (455)
T ss_pred             CCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999987653

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=100.00  E-value=1e-68  Score=555.25  Aligned_cols=371  Identities=32%  Similarity=0.481  Sum_probs=339.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcc-cccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT-IPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~P~Gv  108 (442)
                      ++.+++........+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+.. .+.+.+...+.+++|+||
T Consensus        92 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~GV  170 (518)
T cd07125          92 ERAEILEKAADLLEANRGELIALAAAEAGKTLADADA-EVREAIDFCRYYAAQARELFSDPELPGPTGELNGLELHGRGV  170 (518)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCceeEEEEecccE
Confidence            4455555555555566778899999999999999997 99999999999998887765543 222246677899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|+++++++++ +.+..|+.||+++.|
T Consensus       171 V~~I~p~N~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~ll~eaGlP~gvv~vv~g~~~~~~~~L~~~~~vd~V  250 (518)
T cd07125         171 FVCISPWNFPLAIFTGQIAAALAAGNTVIAKPAEQTPLIAARAVELLHEAGVPRDVLQLVPGDGEEIGEALVAHPRIDGV  250 (518)
T ss_pred             EEEECCcchHHHHHHHHHHHHHHcCCEEEEeCCCcCcHHHHHHHHHHHHcCCCCCcEEEEecCchhhHHHHhcCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999977 588999999999999


Q ss_pred             eecCCHHHHHHHHhhccCC--CCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGAS--NLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .||||+.+|+.|++.+++.  .++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus       251 ~ftGs~~~g~~i~~~aa~~~~~~~~v~lElgGk~p~iV~~dADl~~Aa~~iv~g~f~nsGQ~C~a~~rv~V~~~i~d~f~  330 (518)
T cd07125         251 IFTGSTETAKLINRALAERDGPILPLIAETGGKNAMIVDSTALPEQAVKDVVQSAFGSAGQRCSALRLLYLQEEIAERFI  330 (518)
T ss_pred             EEECCHHHHHHHHHHhhhccCCCceEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEcchhHHHHH
Confidence            9999999999999987632  37899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++|+++++++++|+|.++++++||++++.+++++.+++++++. ++++++||......|+|+.|||+.++  ++.++.+|
T Consensus       331 ~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~-~~~vl~gg~~~~~~g~~~~Ptvl~~v--~~~i~~eE  407 (518)
T cd07125         331 EMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRG-EAWLIAPAPLDDGNGYFVAPGIIEIV--GIFDLTTE  407 (518)
T ss_pred             HHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHh-CCEEEeCCCcCCCCCeEEccEEEeec--CChHhhCc
Confidence            9999999999999999999999999999999999999999987 46888888653336899999999877  78899999


Q ss_pred             hcCCcccccccC--CHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         346 IFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       346 ~fgPvl~v~~~~--~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +||||++++.|+  +++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       408 ~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~IN~~~~  468 (518)
T cd07125         408 VFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLYINRNIT  468 (518)
T ss_pred             ccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEEECCCCC
Confidence            999999999999  99999999999999999999999999999999999999999998764

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=100.00  E-value=1.4e-68  Score=545.65  Aligned_cols=378  Identities=20%  Similarity=0.243  Sum_probs=329.1

Q ss_pred             ccccccccCCCCCC---CccccchhhhcCcc--ccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc-
Q psy5844          18 KNYSAAAVPKPITK---PKIEHTQLFINNEF--VNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-   91 (442)
Q Consensus        18 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~--~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-   91 (442)
                      +.|.+.+.+...|.   .+++++......+.  .+.+++++++|+|||+.+++. |+..+++.+++++....+..++.. 
T Consensus        48 ~~W~~~~~~~~~R~l~~~~il~~~a~~l~~~~~~~~la~~~~~e~GK~~~~a~~-Ev~~~~~~~~~~a~~~~~~~g~~~~  126 (489)
T cd07126          48 KSGLHNPLKNPERYLLYGDVSHRVAHELRKPEVEDFFARLIQRVAPKSDAQALG-EVVVTRKFLENFAGDQVRFLARSFN  126 (489)
T ss_pred             HhccccCCCHHHHhhhHHHHHHHHHHHHHcCCCHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceec
Confidence            33444444444442   45555554444444  488899999999999999998 999999999999988766655432 


Q ss_pred             -ccC-CCcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeec
Q psy5844          92 -PIN-GDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP  169 (442)
Q Consensus        92 -~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~  169 (442)
                       +.. .+...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|+++.++.++|.++|+|+|++|+++
T Consensus       127 ~~~~~~~~~~~v~r~P~GVV~~I~PwNfP~~l~~~~ia~ALaaGN~VVlKPSe~tp~~~~~l~~~~~~aGlP~gv~~vv~  206 (489)
T cd07126         127 VPGDHQGQQSSGYRWPYGPVAIITPFNFPLEIPALQLMGALFMGNKPLLKVDSKVSVVMEQFLRLLHLCGMPATDVDLIH  206 (489)
T ss_pred             cCCCCCCceeEEEEecceEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCCCHHHHHHHHHHHHhCcCcCcEEEEe
Confidence             211 345678999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCC-CHHHHHHHHHHHhhccCCCcc
Q psy5844         170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA-DLDAAVEGAHFGLFFNMGQCC  248 (442)
Q Consensus       170 ~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~da-d~~~a~~~i~~~~~~~~Gq~C  248 (442)
                      |+++....++.|++++.|.||||+.+|+.|...++    +++++|+||+||+||++|+ |++.+++.+++++|.|+||.|
T Consensus       207 G~~~~~~~l~~~~~v~~V~FTGS~~vGr~i~~~~g----~k~~lElgg~~~~IV~~Da~dld~a~~~~~~g~f~naGQ~C  282 (489)
T cd07126         207 SDGPTMNKILLEANPRMTLFTGSSKVAERLALELH----GKVKLEDAGFDWKILGPDVSDVDYVAWQCDQDAYACSGQKC  282 (489)
T ss_pred             CCchhHHHHhcCCCCCEEEEECCHHHHHHHHHHhC----CCEEeecCCCCceEECCCcccHHHHHHHHHHHHHhcCCCcC
Confidence            97643566888999999999999999999988766    4789999999999999999 999999999999999999999


Q ss_pred             cCCCEEEEcCcc-HHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHh-cCCEEEeCCcccCC----
Q psy5844         249 CAGSRTFVQDTI-YDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKS-QGAQLVAGGGRAGD----  322 (442)
Q Consensus       249 ~s~~~v~V~~~~-~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~----  322 (442)
                      ++++|||||+++ +|+|+++|++.++++++|+     +++||+++.. .+++.++++++++ +|+++++||...+.    
T Consensus       283 ~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~-----~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~~  356 (489)
T cd07126         283 SAQSILFAHENWVQAGILDKLKALAEQRKLED-----LTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSIP  356 (489)
T ss_pred             CCCceEEEeCcchHHHHHHHHHHHHHhcccCC-----CcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCccccccccc
Confidence            999999999995 6899999999999999875     5899999998 9999999999997 89999999976432    


Q ss_pred             CC-cccccceecc------CcchhHHHHHhhcCCcccccccCC--HHHHHHHHhcCCCCceEEEecCCCChhhhhccccE
Q psy5844         323 KG-FYVQPTVFAN------VRDDMKIAREEIFGPVQQLIRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR  393 (442)
Q Consensus       323 ~g-~~v~pti~~~------~~~~~~~~~~e~fgPvl~v~~~~~--~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~  393 (442)
                      .+ .|++||++..      ++++|.++++|+||||+++++|++  ++|+++++|+.+|+|+++|||+|.+++.+++++++
T Consensus       357 ~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~~  436 (489)
T cd07126         357 SIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANTV  436 (489)
T ss_pred             CCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCC
Confidence            23 3899999841      567899999999999999999999  99999999999999999999999999999999999


Q ss_pred             eee--EEeeCCHHHH
Q psy5844         394 AGT--LIRFSSIEEV  406 (442)
Q Consensus       394 ~G~--V~vN~~~~~a  406 (442)
                      +|.  |++|+....+
T Consensus       437 ~G~~~v~~n~~~~~~  451 (489)
T cd07126         437 NGTTYAGIRARTTGA  451 (489)
T ss_pred             cceEEEEecCCCCCC
Confidence            999  5588776554

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=100.00  E-value=1.4e-68  Score=548.46  Aligned_cols=368  Identities=28%  Similarity=0.413  Sum_probs=331.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcc-cccC---CCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT-IPIN---GDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~P  105 (442)
                      .|..+++.......++++.+++++++|+|||..|+...|+..+++.+++++...++..+.. ...+   .....+++++|
T Consensus        30 ~R~~~L~~l~~~l~~~~~~i~~a~~~d~Gk~~~ea~~~Ev~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~P  109 (493)
T PTZ00381         30 FRKQQLRNLLRMLEENKQEFSEAVHKDLGRHPFETKMTEVLLTVAEIEHLLKHLDEYLKPEKVDTVGVFGPGKSYIIPEP  109 (493)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCCceEEEEec
Confidence            3444444444555566889999999999999999986699999999999987765543221 1111   22457899999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD  185 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~  185 (442)
                      +|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++|+.+.+..|+.|+ +|
T Consensus       110 lGVV~iI~PwN~Pl~l~~~~l~~ALaaGN~VIlKPse~tp~t~~~l~~ll~~~-lp~~~v~vv~g~~~~~~~l~~~~-~d  187 (493)
T PTZ00381        110 LGVVLVIGAWNYPLNLTLIPLAGAIAAGNTVVLKPSELSPHTSKLMAKLLTKY-LDPSYVRVIEGGVEVTTELLKEP-FD  187 (493)
T ss_pred             CcEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEecCCHHHHHHHHhCC-CC
Confidence            99999999999999999999999999999999999999999999999999996 99999999998558888899987 99


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|.||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|+
T Consensus       188 ~i~FTGS~~vG~~V~~~aa-~~l~pv~lElGGk~p~iV~~dAdl~~Aa~~i~~g~~~naGQ~C~A~~~vlV~~~i~d~f~  266 (493)
T PTZ00381        188 HIFFTGSPRVGKLVMQAAA-ENLTPCTLELGGKSPVIVDKSCNLKVAARRIAWGKFLNAGQTCVAPDYVLVHRSIKDKFI  266 (493)
T ss_pred             EEEEECCHHHHHHHHHHHH-hcCCcEEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhhcCCcCCCCCEEEEeHHHHHHHH
Confidence            9999999999999999888 589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++|++.++++. |++.++++++||+++..+++++.++++   ++|+++++||.. +..++|+.|||+.++.+++.++++|
T Consensus       267 ~~l~~~~~~~~-g~~~~~~~~~gpli~~~~~~ri~~~i~---~~ga~~~~gG~~-~~~~~~i~Ptvl~~v~~~~~i~~eE  341 (493)
T PTZ00381        267 EALKEAIKEFF-GEDPKKSEDYSRIVNEFHTKRLAELIK---DHGGKVVYGGEV-DIENKYVAPTIIVNPDLDSPLMQEE  341 (493)
T ss_pred             HHHHHHHHHHh-CCCCccCCCcCCCCCHHHHHHHHHHHH---hCCCcEEECCCc-CCCCCeEeeEEEecCCCCChHHhcc
Confidence            99999999986 766688899999999999999999996   368899999875 3467899999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      +||||+++..|++++|+|+++|+.+++|+++|||+|.+.+.++++++++|.|+||+...+
T Consensus       342 iFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~IN~~~~~  401 (493)
T PTZ00381        342 IFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVVINDCVFH  401 (493)
T ss_pred             ccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEECCcccc
Confidence            999999999999999999999999999999999999999999999999999999987644

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.9e-68  Score=550.06  Aligned_cols=365  Identities=32%  Similarity=0.503  Sum_probs=333.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc--ccc---cC---CCcceEE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK--TIP---IN---GDFFAYT  101 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~--~~~---~~---~~~~~~~  101 (442)
                      .|.++++.......+.++.+++++++|+|||..++.. |+..+++.+++++..+.+..++  ...   .+   .+...+.
T Consensus        76 ~R~~iL~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  154 (496)
T PLN00412         76 KRAELLHKAAAILKEHKAPIAECLVKEIAKPAKDAVT-EVVRSGDLISYTAEEGVRILGEGKFLVSDSFPGNERNKYCLT  154 (496)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHHhcCCcccccccCCCccCCceeEE
Confidence            3445555554544555788899999999999999997 9999999999998776554322  211   11   1234578


Q ss_pred             EeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhc
Q psy5844         102 RHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQ  180 (442)
Q Consensus       102 ~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~  180 (442)
                      +++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|++++++ +.++.|..
T Consensus       155 ~~~P~GVv~~I~p~N~P~~~~~~~i~~ALaaGN~VIlKPs~~t~~~~~~l~~~l~~aglP~g~~~~v~g~~~~~~~~l~~  234 (496)
T PLN00412        155 SKIPLGVVLAIPPFNYPVNLAVSKIAPALIAGNAVVLKPPTQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTM  234 (496)
T ss_pred             EEecceEEEEECCCCchHHHHHHHHHHHHHcCCEEEEECCccCcHHHHHHHHHHHHhCCCcccEEEEecCchHHHHHHhc
Confidence            89999999999999999999999999999999999999999999999999999999999999999999876 88899999


Q ss_pred             CCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCcc
Q psy5844         181 HPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTI  260 (442)
Q Consensus       181 ~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~  260 (442)
                      ||+++.|.|||| .+|+.|.+.++   .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+++
T Consensus       235 ~~~v~~V~ftGs-~~g~~v~~~a~---~~~~~lElGG~~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rv~V~~~i  310 (496)
T PLN00412        235 HPGVNCISFTGG-DTGIAISKKAG---MVPLQMELGGKDACIVLEDADLDLAAANIIKGGFSYSGQRCTAVKVVLVMESV  310 (496)
T ss_pred             CCCcCEEEEeCh-HHHHHHHHHhC---CCcEEEEcCCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCCccCeEEEEcHHH
Confidence            999999999999 99999998764   68999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhH
Q psy5844         261 YDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMK  340 (442)
Q Consensus       261 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~  340 (442)
                      +|+|+++|+++++++++|+|.+ ++++||+++..+++++.+++++++..|++++++|+.   .|+|+.|||+.+++++++
T Consensus       311 ~d~f~~~l~~~~~~~~~g~p~~-~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~---~g~~~~Ptvl~~v~~~~~  386 (496)
T PLN00412        311 ADALVEKVNAKVAKLTVGPPED-DCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKR---EGNLIWPLLLDNVRPDMR  386 (496)
T ss_pred             HHHHHHHHHHHHHhCccCCCcc-cCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCeEEecEEEeCCCCCCH
Confidence            9999999999999999999987 789999999999999999999999999999987753   689999999999999999


Q ss_pred             HHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         341 IAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       341 ~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ++++|+||||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||++.
T Consensus       387 i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~  449 (496)
T PLN00412        387 IAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQINSAP  449 (496)
T ss_pred             HHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCC
Confidence            999999999999999999999999999999999999999999999999999999999999875

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=1.1e-68  Score=584.14  Aligned_cols=373  Identities=30%  Similarity=0.450  Sum_probs=340.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc--CCCcceEEEeeccc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI--NGDFFAYTRHEPVG  107 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~P~G  107 (442)
                      .+..++.+......+.++.++.++++|+|||+.++.. |+.++++.++|++..+.+..+....+  +++..++++++|+|
T Consensus       608 ~Ra~iL~kaAdll~~~~~eL~~l~~~E~GK~~~~a~~-EV~eaid~lr~ya~~a~~~~~~~~~l~g~~ge~n~~~~~P~G  686 (1038)
T PRK11904        608 ERAAILERAADLLEANRAELIALCVREAGKTLQDAIA-EVREAVDFCRYYAAQARRLFGAPEKLPGPTGESNELRLHGRG  686 (1038)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCCcccCCCCCceeEEEEecce
Confidence            3444555554444445777799999999999999998 99999999999999987776543333  36788899999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK  186 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~  186 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++ +++..|+.||+++.
T Consensus       687 Vv~~IsPwNfPlai~~~~i~aALaaGNtVIlKPse~tpl~a~~l~~ll~eAGlP~gvl~lv~G~g~~vg~~Lv~~p~v~~  766 (1038)
T PRK11904        687 VFVCISPWNFPLAIFLGQVAAALAAGNTVIAKPAEQTPLIAAEAVKLLHEAGIPKDVLQLLPGDGATVGAALTADPRIAG  766 (1038)
T ss_pred             EEEEECCCccHHHHHHHHHHHHHHcCCEEEeeCCCcCHHHHHHHHHHHHHhCcCcceEEEeeCCchHHHHHHhcCCCcCe
Confidence            99999999999999999999999999999999999999999999999999999999999999988 78999999999999


Q ss_pred             EeecCCHHHHHHHHhhccCC--CCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         187 VAFTGSTEVGKLVQQGSGAS--NLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       187 v~ftGs~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      |.||||+.+|+.|.+.++.+  ..+|+++|+|||||+||++|||++.|++.+++|+|.++||.|+++++||||++++|+|
T Consensus       767 V~FTGS~~~g~~I~~~~A~~~g~~~pvi~ElGGkNa~IV~~dAdld~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f  846 (1038)
T PRK11904        767 VAFTGSTETARIINRTLAARDGPIVPLIAETGGQNAMIVDSTALPEQVVDDVVTSAFRSAGQRCSALRVLFVQEDIADRV  846 (1038)
T ss_pred             EEEECCHHHHHHHHHHHhhccCCCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEeHHHHHHH
Confidence            99999999999999887742  3689999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccCcchhHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +++|++.++++++|+|.|+++++||++++.+++++.++|+++.. |+++++||...+  ..|+|+.|||+..  .++..+
T Consensus       847 l~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~-ga~vl~gg~~~~~~~~G~fv~PTvi~~--~~~~~~  923 (1038)
T PRK11904        847 IEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKR-EARLLAQLPLPAGTENGHFVAPTAFEI--DSISQL  923 (1038)
T ss_pred             HHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHc-CCEEEeCCCCCCCCCCceEEeeEEEcc--CCcHHh
Confidence            99999999999999999999999999999999999999999876 889999987643  3589999999863  566778


Q ss_pred             HHhhcCCcccccccC--CHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH
Q psy5844         343 REEIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV  406 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~--~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a  406 (442)
                      .+|+||||+++++|+  +++|+|+++|+++|||+++|||+|.+.+.++..++++|.||||+....+
T Consensus       924 ~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vyIN~~~~ga  989 (1038)
T PRK11904        924 EREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVYVNRNQIGA  989 (1038)
T ss_pred             CCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEEEeCCCccC
Confidence            999999999999998  6999999999999999999999999999999999999999999987665

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=100.00  E-value=3.5e-68  Score=540.12  Aligned_cols=378  Identities=30%  Similarity=0.406  Sum_probs=340.6

Q ss_pred             ccccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc-ccccC---CCc
Q psy5844          22 AAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPIN---GDF   97 (442)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~   97 (442)
                      |..++...|. ++++.......+.++.+++++++|+|||+.|+...|+..+++.+++++..+....+. ....+   .+.
T Consensus        14 W~~~~~~~R~-~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (433)
T cd07134          14 LRASTAAERI-AKLKRLKKAILARREEIIAALAADFRKPAAEVDLTEILPVLSEINHAIKHLKKWMKPKRVRTPLLLFGT   92 (433)
T ss_pred             cCCCCHHHHH-HHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCC
Confidence            4444434444 444444444444578899999999999999997449999999999998776543332 12111   355


Q ss_pred             ceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhh
Q psy5844          98 FAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAA  177 (442)
Q Consensus        98 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~  177 (442)
                      ..+++++|+|||++|+|||||++..++++++||++||+||+|||+.+|.++..+.+++.++ +|+|++++++|+.+.+..
T Consensus        93 ~~~~~~~P~Gvv~~i~p~N~P~~~~~~~~~~ALaaGN~Vi~Kps~~~p~~~~~~~~~~~~a-~p~g~v~~v~g~~~~~~~  171 (433)
T cd07134          93 KSKIRYEPKGVCLIISPWNYPFNLAFGPLVSAIAAGNTAILKPSELTPHTSAVIAKIIREA-FDEDEVAVFEGDAEVAQA  171 (433)
T ss_pred             ceEEEEecCCEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCEEEEEeCChhHHHH
Confidence            6789999999999999999999999999999999999999999999999999999999999 999999999996688889


Q ss_pred             hhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEc
Q psy5844         178 LVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQ  257 (442)
Q Consensus       178 l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~  257 (442)
                      |+.|+ ++.|.||||+.+|+.|++.++ ...+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||
T Consensus       172 l~~~~-v~~v~ftGs~~~g~~i~~~aa-~~~~~~~lelgG~~~~iV~~dAD~~~aa~~i~~~~~~~~GQ~C~a~~rv~V~  249 (433)
T cd07134         172 LLELP-FDHIFFTGSPAVGKIVMAAAA-KHLASVTLELGGKSPTIVDETADLKKAAKKIAWGKFLNAGQTCIAPDYVFVH  249 (433)
T ss_pred             HHhCC-CCEEEEECChHHHHHHHHHHH-hcCCcEEEEccCCCcEEECCCCCHHHHHHHHHHHhhcCcCCcccCCcEEEEC
Confidence            99998 999999999999999999888 5889999999999999999999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHHHHHhhcccCCC-CCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCc
Q psy5844         258 DTIYDEFVARSGERAKRRTVGDP-FDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVR  336 (442)
Q Consensus       258 ~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~  336 (442)
                      ++++|+|+++|++++++++.|+| .+.++++||++++.+++++.++|++++.+|+++++||... ..++|++||++.+++
T Consensus       250 ~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~-~~g~~~~Ptvl~~~~  328 (433)
T cd07134         250 ESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFD-AAQRYIAPTVLTNVT  328 (433)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcC-CCCCEEeeEEEeCCC
Confidence            99999999999999999988887 8889999999999999999999999999999999998753 357999999999999


Q ss_pred             chhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         337 DDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       337 ~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +++.++.+|+||||+.++.|++.+|+++++|+.+++++++|||+|.+.+.++++++++|.|++|+...
T Consensus       329 ~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~iN~~~~  396 (433)
T cd07134         329 PDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVVVNDVVL  396 (433)
T ss_pred             CccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence            99999999999999999999999999999999999999999999999999999999999999998764

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=100.00  E-value=2.6e-68  Score=541.21  Aligned_cols=377  Identities=28%  Similarity=0.404  Sum_probs=336.6

Q ss_pred             ccccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCC-hhhhchhHHHHHHHHHHHHHHhHhhhcCccc-ccC---CC
Q psy5844          22 AAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKP-YNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PIN---GD   96 (442)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~-~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~---~~   96 (442)
                      +..+++. .+.++++.......+.++.+++++++|+||+ ..++...|+..+++.+++++..+.+..+... ..+   .+
T Consensus        14 w~~~~~~-~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (434)
T cd07133          14 NPPPSLE-ERRDRLDRLKALLLDNQDALAEAISADFGHRSRHETLLAEILPSIAGIKHARKHLKKWMKPSRRHVGLLFLP   92 (434)
T ss_pred             cCCCCHH-HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCChHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCC
Confidence            3344433 4455555555555555788999999999985 5777544999999999999987765443321 111   23


Q ss_pred             cceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchh
Q psy5844          97 FFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGA  176 (442)
Q Consensus        97 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~  176 (442)
                      ...+++++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|+|++++++|+.+.++
T Consensus        93 ~~~~~~~~P~Gvv~~I~pwN~P~~~~~~~~~~ALaaGN~vvlKps~~~p~~~~~l~~l~~~a-lP~g~~~~v~g~~~~~~  171 (434)
T cd07133          93 AKAEVEYQPLGVVGIIVPWNYPLYLALGPLIAALAAGNRVMIKPSEFTPRTSALLAELLAEY-FDEDEVAVVTGGADVAA  171 (434)
T ss_pred             CceEEEEecccEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHh-CCcCeEEEEeCChHHHH
Confidence            45789999999999999999999999999999999999999999999999999999999997 99999999998657788


Q ss_pred             hhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEE
Q psy5844         177 ALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFV  256 (442)
Q Consensus       177 ~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V  256 (442)
                      .|+.|+ ++.|+||||+.+|+.|++.++ .+++|+++|+|||||+||++|+|++.|++.+++++|.|+||.|++++||||
T Consensus       172 ~l~~~~-v~~V~ftGs~~~g~~v~~~aa-~~~~~~~lElgGk~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V  249 (434)
T cd07133         172 AFSSLP-FDHLLFTGSTAVGRHVMRAAA-ENLTPVTLELGGKSPAIIAPDADLAKAAERIAFGKLLNAGQTCVAPDYVLV  249 (434)
T ss_pred             HHHhCC-CCEEEEeCchHHHHHHHHHHH-hcCceEEEEccCCCcEEEeCCCCHHHHHHHHHHHHhccCCCcccCCCEEEE
Confidence            888776 999999999999999999888 589999999999999999999999999999999999999999999999999


Q ss_pred             cCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceecc
Q psy5844         257 QDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFAN  334 (442)
Q Consensus       257 ~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~  334 (442)
                      |++++|+|+++|.++++++++|+  ++++++||++++.+++++.+++++++.+|+++++||....  .+|+|+.||++.+
T Consensus       250 ~~~i~~~f~~~l~~~~~~~~~g~--~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Ptvl~~  327 (434)
T cd07133         250 PEDKLEEFVAAAKAAVAKMYPTL--ADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPTLVLN  327 (434)
T ss_pred             cHHHHHHHHHHHHHHHHHhcCCC--CCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEeeEEEeC
Confidence            99999999999999999999886  4678999999999999999999999999999999987543  3689999999999


Q ss_pred             CcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         335 VRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       335 ~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +.+++.++++|+||||+.+..|++.+|+|+++|+.+++|+++|||+|.+.+.++++++++|.|++|+...
T Consensus       328 ~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~iN~~~~  397 (434)
T cd07133         328 VTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVTINDTLL  397 (434)
T ss_pred             CCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence            9999999999999999999999999999999999999999999999999999999999999999998763

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=100.00  E-value=3.2e-68  Score=548.78  Aligned_cols=369  Identities=24%  Similarity=0.323  Sum_probs=325.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC---------CCcceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN---------GDFFAY  100 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~~  100 (442)
                      +|..++.+......+.++.+++++++|+|||+.+++. |+.++++.+++++.++....+.....+         .....+
T Consensus        64 eR~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~a~~-ev~~~i~~l~~~a~~a~~~~~~~~~~~~~~~~~~~~~~~~~~  142 (521)
T PRK11903         64 QRAALLAAIVKVLQANRDAYYDIATANSGTTRNDSAV-DIDGGIFTLGYYAKLGAALGDARLLRDGEAVQLGKDPAFQGQ  142 (521)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHcCCCcccCCCccccccccccccce
Confidence            4445555554444455777799999999999999998 999999999999998866543221111         122346


Q ss_pred             EEeec-cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhC-CCCCcEEeecCCc-cchhh
Q psy5844         101 TRHEP-VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG-IPEGVVNIVPGYG-DAGAA  177 (442)
Q Consensus       101 ~~~~P-~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~ag-lp~~~~~~v~~~~-~~~~~  177 (442)
                      ..++| +|||++|+|||||+.+.++++++||++||+||+|||+.+|.++..+.++|.++| +|+|++++++|++ ++...
T Consensus       143 ~~~~P~~GVv~~I~pwN~P~~~~~~~~~~ALaaGN~VV~KPs~~tp~~~~~l~~~~~~ag~lP~gv~~~v~g~~~~~~~~  222 (521)
T PRK11903        143 HVLVPTRGVALFINAFNFPAWGLWEKAAPALLAGVPVIVKPATATAWLTQRMVKDVVAAGILPAGALSVVCGSSAGLLDH  222 (521)
T ss_pred             EEEecCcceEEEECCcchHHHHHHHHHHHHHHcCCeEEEEcCCcChHHHHHHHHHHHHhCCCCcCceEEeeCCchHHHhc
Confidence            78899 699999999999999999999999999999999999999999999999999999 9999999999866 55444


Q ss_pred             hhcCCCccEEeecCCHHHHHHHHhhcc-CCCCceeeeecCCCCceEEeCCCC-----HHHHHHHHHHHhhccCCCcccCC
Q psy5844         178 LVQHPGVDKVAFTGSTEVGKLVQQGSG-ASNLKRTTLELGGKSPNIIFADAD-----LDAAVEGAHFGLFFNMGQCCCAG  251 (442)
Q Consensus       178 l~~~~~v~~v~ftGs~~~~~~i~~~~~-~~~~~~~~~e~gG~~~~iV~~dad-----~~~a~~~i~~~~~~~~Gq~C~s~  251 (442)
                      |   +.++.|.||||+.+|+.|++.++ ..+++|+++|+|||||+||++|||     ++.+++.+++++|.|+||.|+++
T Consensus       223 l---~~v~~v~fTGS~~~G~~v~~~aa~~~~~~~~~lElGGknp~IV~~dAd~~~~~~~~aa~~i~~~~f~~sGQ~C~a~  299 (521)
T PRK11903        223 L---QPFDVVSFTGSAETAAVLRSHPAVVQRSVRVNVEADSLNSALLGPDAAPGSEAFDLFVKEVVREMTVKSGQKCTAI  299 (521)
T ss_pred             c---cCCCEEEEECCHHHHHHHHhhhhhhccCceeEeeccccCceEEccCCcccchhHHHHHHHHHHHHHhccCCCccCC
Confidence            4   68999999999999999998642 257899999999999999999999     59999999999999999999999


Q ss_pred             CEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc------CCCCc
Q psy5844         252 SRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA------GDKGF  325 (442)
Q Consensus       252 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~------~~~g~  325 (442)
                      +|||||++++|+|+++|+++++++++|+|.|+++++|||++..+++++.++|+.. .+|+++++||...      ...|+
T Consensus       300 ~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~-~~ga~vl~gg~~~~~~~~~~~~g~  378 (521)
T PRK11903        300 RRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAAL-RAQAEVLFDGGGFALVDADPAVAA  378 (521)
T ss_pred             eEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHH-hcCCEEEECCccCCCCCCCCCCCe
Confidence            9999999999999999999999999999999999999999999999999999964 5799999999652      13589


Q ss_pred             ccccceeccCcc--hhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhcccc--EeeeEEeeC
Q psy5844         326 YVQPTVFANVRD--DMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL--RAGTLIRFS  401 (442)
Q Consensus       326 ~v~pti~~~~~~--~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~--~~G~V~vN~  401 (442)
                      |+.|||++.+..  ++.++++|+||||+++..|++.+|+++++|+.+++|+++|||+|.+.+.++++++  ++|+|++|+
T Consensus       379 ~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G~V~iN~  458 (521)
T PRK11903        379 CVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHGRVHVIS  458 (521)
T ss_pred             EEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCCEEEEcC
Confidence            999999986543  4688899999999999999999999999999999999999999999999999999  899999997


Q ss_pred             CH
Q psy5844         402 SI  403 (442)
Q Consensus       402 ~~  403 (442)
                      ..
T Consensus       459 ~~  460 (521)
T PRK11903        459 PD  460 (521)
T ss_pred             cc
Confidence            54

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=100.00  E-value=5.1e-68  Score=545.82  Aligned_cols=360  Identities=30%  Similarity=0.449  Sum_probs=328.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .|..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++...+...+           ...++|+|||
T Consensus        97 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~i~~l~~~a~~~~~~~~-----------~~~~~P~GVV  164 (500)
T TIGR01238        97 ERAAKLDRLADLLELHMPELMALCVREAGKTIHNAIA-EVREAVDFCRYYAKQVRDVLG-----------EFSVESRGVF  164 (500)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------ceeccCcceE
Confidence            3444555554555555777899999999999999998 999999999999987754422           1368999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+++|++ +.++.|+.||+++.|+
T Consensus       165 ~~I~pwN~P~~~~~~~i~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~aGlP~gvv~~v~g~~~~~~~~l~~~~~v~~V~  244 (500)
T TIGR01238       165 VCISPWNFPLAIFTGQISAALAAGNTVIAKPAEQTSLIAYRAVELMQEAGFPAGTIQLLPGRGADVGAALTSDPRIAGVA  244 (500)
T ss_pred             EEECCCchHHHHHHHHHHHHHHcCCEEEEeCCCCccHHHHHHHHHHHHcCCCCCceEEEecCcchHHHHHhcCCCcCeEE
Confidence            999999999999999999999999999999999999999999999999999999999999876 8899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCC---ceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNL---KRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~---~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      ||||+.+|+.|.+.+++ +.   +|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+
T Consensus       245 ftGs~~~g~~v~~~aa~-~~~~~~~v~lElGGknp~IV~~dAdld~Aa~~i~~~~f~nsGQ~C~a~~rv~V~~~i~d~f~  323 (500)
T TIGR01238       245 FTGSTEVAQLINQTLAQ-REDAPVPLIAETGGQNAMIVDSTALPEQVVRDVLRSAFDSAGQRCSALRVLCVQEDVADRVL  323 (500)
T ss_pred             EECCHHHHHHHHHHHhh-cccCCceEEEecCCcCcEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCceeEEcHhhHHHHH
Confidence            99999999999998884 44   799999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCc---ccCCCCcccccceeccCcchhHHH
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGG---RAGDKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~---~~~~~g~~v~pti~~~~~~~~~~~  342 (442)
                      ++|.++++++++|+|.++++++||++++.+++++.++++++...|+++..++.   +....|+|+.|||+..  +++.++
T Consensus       324 ~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~~~g~f~~PTvl~~--~~~~~~  401 (500)
T TIGR01238       324 TMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRACQHGTFVAPTLFEL--DDIAEL  401 (500)
T ss_pred             HHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCCCCCeeEcCEEEcc--CCchHh
Confidence            99999999999999999999999999999999999999999999998874332   2223689999999974  577889


Q ss_pred             HHhhcCCcccccccC--CHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         343 REEIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~--~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ++|+||||++++.|+  +++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       402 ~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~IN~~~~  465 (500)
T TIGR01238       402 SEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCYVNRNQV  465 (500)
T ss_pred             hCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEEECCCCC
Confidence            999999999999998  79999999999999999999999999999999999999999998664

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=100.00  E-value=8.2e-68  Score=562.36  Aligned_cols=366  Identities=27%  Similarity=0.357  Sum_probs=322.7

Q ss_pred             CCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhc--------CcccccC-CC-cceE
Q psy5844          31 KPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIH--------GKTIPIN-GD-FFAY  100 (442)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~--------~~~~~~~-~~-~~~~  100 (442)
                      |..++.+......+.++.+++ +++|+|||+.+++. |+..+++.+++++.++++..        ++..+.. .+ ...+
T Consensus        65 R~~~L~~~a~~l~~~~~ela~-l~~e~GK~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  142 (675)
T PRK11563         65 RAAMLKALAKYLLERKEELYA-LSAQTGATRRDSWI-DIEGGIGTLFTYASKGRRELPNDTVLVEGEVEPLSKGGTFAGR  142 (675)
T ss_pred             HHHHHHHHHHHHHHhHHHHHH-HHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccCCccccccCCCcccce
Confidence            344444443434444566677 58999999999998 99999999999998875543        2222211 12 2257


Q ss_pred             EEeecc-ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhC-CCCCcEEeecCCccchhhh
Q psy5844         101 TRHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG-IPEGVVNIVPGYGDAGAAL  178 (442)
Q Consensus       101 ~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~ag-lp~~~~~~v~~~~~~~~~l  178 (442)
                      ..++|+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.++| +|+|++|+++|+.  ...+
T Consensus       143 ~~~~p~~GVv~~I~PwNfP~~~~~~~i~pALaaGN~VV~KPse~tp~~a~~l~~~~~eaG~~P~gv~~vv~g~~--~~~~  220 (675)
T PRK11563        143 HILTPLEGVAVHINAFNFPVWGMLEKLAPAFLAGVPAIVKPATATAYLTEAVVRLIVESGLLPEGALQLICGSA--GDLL  220 (675)
T ss_pred             EEEeecCceEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHcCCCCCCcEEEeeCCH--HHHh
Confidence            888997 99999999999999999999999999999999999999999999999999999 9999999999854  2233


Q ss_pred             hcCCCccEEeecCCHHHHHHHHhh--ccCCCCceeeeecCCCCceEEeCCCC-----HHHHHHHHHHHhhccCCCcccCC
Q psy5844         179 VQHPGVDKVAFTGSTEVGKLVQQG--SGASNLKRTTLELGGKSPNIIFADAD-----LDAAVEGAHFGLFFNMGQCCCAG  251 (442)
Q Consensus       179 ~~~~~v~~v~ftGs~~~~~~i~~~--~~~~~~~~~~~e~gG~~~~iV~~dad-----~~~a~~~i~~~~~~~~Gq~C~s~  251 (442)
                      ..++.++.|.||||+++|+.|++.  ++ .+++|+++|+|||||+||++|||     ++.|++.+++++|.|+||.|+++
T Consensus       221 ~~~~~i~~v~FTGS~~~G~~i~~~~~a~-~~~~~~~lELGGknp~IV~~DAd~~~~dld~aa~~i~~~~f~~aGQ~C~a~  299 (675)
T PRK11563        221 DHLDGQDVVTFTGSAATAQKLRAHPNVV-ANSVPFTAEADSLNAAILGPDATPGTPEFDLFVKEVVREMTVKAGQKCTAI  299 (675)
T ss_pred             hcCCCCCEEEEECcHHHHHHHHhhhhhh-hCCceEEEecCCcCceEECCCCCcCchhHHHHHHHHHHHHHHhCCCccccc
Confidence            334679999999999999999985  33 58999999999999999999995     99999999999999999999999


Q ss_pred             CEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc-------CCCC
Q psy5844         252 SRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA-------GDKG  324 (442)
Q Consensus       252 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-------~~~g  324 (442)
                      +|||||+++||+|+++|+++++++++|+|.|+++++|||+++.+++++.++|++++++ +++++||...       ...|
T Consensus       300 ~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~-a~vl~Gg~~~~~~~~~~~~~g  378 (675)
T PRK11563        300 RRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAA-AEIVFGGPDSFEVVGADAEKG  378 (675)
T ss_pred             eeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhC-CEEEECCcccccccCCCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999998 9999998531       1358


Q ss_pred             cccccceeccCcc--hhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccE--eeeEEee
Q psy5844         325 FYVQPTVFANVRD--DMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR--AGTLIRF  400 (442)
Q Consensus       325 ~~v~pti~~~~~~--~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~--~G~V~vN  400 (442)
                      +|+.|||+.++++  ++.++.+|+||||+++++|++.+|+++++|+++|||+++|||+|.+.+.+++++++  +|.|+||
T Consensus       379 ~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~iN  458 (675)
T PRK11563        379 AFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLLVL  458 (675)
T ss_pred             eeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEEEc
Confidence            9999999999888  57899999999999999999999999999999999999999999999999999996  9999999


Q ss_pred             CC
Q psy5844         401 SS  402 (442)
Q Consensus       401 ~~  402 (442)
                      +.
T Consensus       459 ~~  460 (675)
T PRK11563        459 NR  460 (675)
T ss_pred             Cc
Confidence            74

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=100.00  E-value=2.5e-67  Score=541.35  Aligned_cols=369  Identities=36%  Similarity=0.569  Sum_probs=340.5

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-----CCcceEEEee
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-----GDFFAYTRHE  104 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  104 (442)
                      .+..++........+.++.+++++++|+|||..++.. |+..+++.+++++..+++..++..+..     .+...+.+++
T Consensus        62 ~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  140 (473)
T cd07082          62 ERIDCLHKFADLLKENKEEVANLLMWEIGKTLKDALK-EVDRTIDYIRDTIEELKRLDGDSLPGDWFPGTKGKIAQVRRE  140 (473)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccccccCCCceeEEEEe
Confidence            3444555554444556778899999999999999988 999999999999988876655433221     2455689999


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCC
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPG  183 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~  183 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++ +.++.|+.|++
T Consensus       141 P~GVv~~I~p~N~P~~~~~~~i~~AL~aGN~vilKps~~~~~~~~~l~~~l~~aglp~~~~~vv~g~~~~~~~~l~~~~~  220 (473)
T cd07082         141 PLGVVLAIGPFNYPLNLTVSKLIPALIMGNTVVFKPATQGVLLGIPLAEAFHDAGFPKGVVNVVTGRGREIGDPLVTHGR  220 (473)
T ss_pred             cceEEEEECCcCcHHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHcCCCccceEEEecCcHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999977 77899999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      ++.|.||||+.+|+.|.+.++   .+|+++|+||+||+||++|||++.|++.+++++|.++||.|++++|||||++++|+
T Consensus       221 v~~V~ftGs~~~g~~i~~~a~---~~~~~lelgg~n~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~  297 (473)
T cd07082         221 IDVISFTGSTEVGNRLKKQHP---MKRLVLELGGKDPAIVLPDADLELAAKEIVKGALSYSGQRCTAIKRVLVHESVADE  297 (473)
T ss_pred             CCEEEEECcHHHHHHHHHHhC---CCcEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHHhCCCcCCCCeEEEEcHHHHHH
Confidence            999999999999999998765   68999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHH
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++|.++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...  .|+|+.||++.++.+++.+++
T Consensus       298 f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~--~g~~~~Ptvl~~~~~~~~~~~  375 (473)
T cd07082         298 LVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGRE--GGNLIYPTLLDPVTPDMRLAW  375 (473)
T ss_pred             HHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC--CCeEEeeEEEecCCCCCHHHh
Confidence            999999999999999999999999999999999999999999999999999999763  389999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +|+|||++++..|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|++|+...
T Consensus       376 eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~iN~~~~  436 (473)
T cd07082         376 EEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVNINSKCQ  436 (473)
T ss_pred             CcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999999998764

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=100.00  E-value=2.3e-67  Score=539.77  Aligned_cols=367  Identities=41%  Similarity=0.675  Sum_probs=337.5

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-----CCcceEEEee
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-----GDFFAYTRHE  104 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  104 (442)
                      ++..++........+.++.+++++++|+|||..++.. |+..+++.+++++..+.+..++..+..     .+...+.+++
T Consensus        44 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  122 (453)
T cd07149          44 ERAEILERAAQLLEERREEFARTIALEAGKPIKDARK-EVDRAIETLRLSAEEAKRLAGETIPFDASPGGEGRIGFTIRE  122 (453)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCCCeeEEEEee
Confidence            4455555554544455678899999999999999998 999999999999887766655433321     1234578899


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCC
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPG  183 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~  183 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++++++|++ +.+..|+.||+
T Consensus       123 P~GVv~~i~p~N~P~~~~~~~~~~ALaaGN~VI~Kps~~~p~~~~~l~~~l~~ag~P~gvv~~v~g~~~~~~~~l~~~~~  202 (453)
T cd07149         123 PIGVVAAITPFNFPLNLVAHKVGPAIAAGNAVVLKPASQTPLSALKLAELLLEAGLPKGALNVVTGSGETVGDALVTDPR  202 (453)
T ss_pred             cceEEEEECCCCChHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHcCcCccceEEeecCchHHHHHHhcCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999976 66899999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      ++.|.||||+.+|+.|++.++   .+|+++|+|||||+||++|+|++.+++.+++++|.|+||.|+++++||||++++|+
T Consensus       203 v~~V~ftGs~~~g~~i~~~a~---~~~~~lelGGk~p~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~i~d~  279 (453)
T cd07149         203 VRMISFTGSPAVGEAIARKAG---LKKVTLELGSNAAVIVDADADLEKAVERCVSGAFANAGQVCISVQRIFVHEDIYDE  279 (453)
T ss_pred             CCEEEEECCHHHHHHHHHHcC---CCceeeecCCCceEEECCCCCHHHHHHHHHHHHHHhcCCCCCCCceEEEcHhHHHH
Confidence            999999999999999998764   68999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHH
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++|+++++++++|+|.++++++||++++.+++++.+++++++.+|+++++||..   .++|+.||++.++.+++.++.
T Consensus       280 f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~---~g~~~~Ptvl~~~~~~~~~~~  356 (453)
T cd07149         280 FLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKR---DGAILEPTVLTDVPPDMKVVC  356 (453)
T ss_pred             HHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCeEEcCEEEeCCCCCCHHHh
Confidence            99999999999999999999999999999999999999999999999999999865   478999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +|+|||+++++.|++++|+++++|+.+++|+++|||+|.+.+.++++++++|.|+||+..
T Consensus       357 ~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~iN~~~  416 (453)
T cd07149         357 EEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVMINDSS  416 (453)
T ss_pred             CCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEEECCCC
Confidence            999999999999999999999999999999999999999999999999999999999875

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=2.4e-67  Score=578.27  Aligned_cols=362  Identities=31%  Similarity=0.479  Sum_probs=329.5

Q ss_pred             CCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceEE
Q psy5844          31 KPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCG  110 (442)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~  110 (442)
                      +..++........+.++.++.++++|+|||+.++.. ||.+++++++||+..++....           ...++|+|||+
T Consensus       706 Ra~iL~r~Adlle~~~~eL~~l~~~EaGKt~~~A~~-EV~eaidflryyA~~a~~~~~-----------~~~~~PlGVV~  773 (1318)
T PRK11809        706 RAAILERAADLMEAQMQTLMGLLVREAGKTFSNAIA-EVREAVDFLRYYAGQVRDDFD-----------NDTHRPLGPVV  773 (1318)
T ss_pred             HHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------CceeecccEEE
Confidence            334444444444444666799999999999999998 999999999999987754211           24689999999


Q ss_pred             EecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEee
Q psy5844         111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAF  189 (442)
Q Consensus       111 ~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~f  189 (442)
                      +|+|||||+..+++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++ +++..|+.||+|++|+|
T Consensus       774 ~IsPWNFPlai~~g~iaaALaAGN~VV~KPseqTpl~a~~lv~ll~eAGlP~gvlqlv~G~g~~vg~~Lv~~p~V~~V~F  853 (1318)
T PRK11809        774 CISPWNFPLAIFTGQVAAALAAGNSVLAKPAEQTPLIAAQAVRILLEAGVPAGVVQLLPGRGETVGAALVADARVRGVMF  853 (1318)
T ss_pred             EECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCcHHHHHHHHHHHHHhCcCcCeEEEeeCCcHHHHHHHhcCCCcCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999977 78999999999999999


Q ss_pred             cCCHHHHHHHHhhccCC-----CCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         190 TGSTEVGKLVQQGSGAS-----NLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~-----~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      |||+.+|+.|.+.++++     ..+|+++|+||+|++||++|||++.|++.+++|+|.++||.|++.+++|||++++|+|
T Consensus       854 TGSt~tg~~I~~~aA~~l~~~g~~~pliaElGGkNa~IVdsdAdle~Av~~iv~sAF~~aGQrCsA~~rl~V~e~Iad~f  933 (1318)
T PRK11809        854 TGSTEVARLLQRNLAGRLDPQGRPIPLIAETGGQNAMIVDSSALTEQVVADVLASAFDSAGQRCSALRVLCLQDDVADRT  933 (1318)
T ss_pred             eCCHHHHHHHHHHHhhhcccccCceeEEEecCCccceEECCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEcHHHHHHH
Confidence            99999999999987732     1379999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC---CCCcccccceeccCcchhHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG---DKGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~---~~g~~v~pti~~~~~~~~~~  341 (442)
                      +++|++.++++++|+|.+.++++||++++.+.+++.++|++++..|++++.++...+   +.|+|+.|||+..  .++..
T Consensus       934 l~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~G~fv~PTIi~~--~~~~~ 1011 (1318)
T PRK11809        934 LKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQSGTFVPPTLIEL--DSFDE 1011 (1318)
T ss_pred             HHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCCCeEEeeEEEec--cchhh
Confidence            999999999999999999999999999999999999999999999999988775432   4689999999973  56778


Q ss_pred             HHHhhcCCcccccccC--CHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH
Q psy5844         342 AREEIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV  406 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~--~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a  406 (442)
                      +.+|+||||+.+++|+  +++|+|+++|+++|||+.+|||+|.+.+.++.+++++|+||||+....+
T Consensus      1012 l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvyINr~~~ga 1078 (1318)
T PRK11809       1012 LKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLYVNRNMVGA 1078 (1318)
T ss_pred             hcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEEECCCCcCC
Confidence            8999999999999996  7999999999999999999999999999999999999999999987655

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=100.00  E-value=4.4e-67  Score=533.14  Aligned_cols=365  Identities=26%  Similarity=0.372  Sum_probs=328.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc-c--C-CCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-I--N-GDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~-~--~-~~~~~~~~~~P  105 (442)
                      .|.+++++......+.++.+++++++|+|||+.++...|+..+++.++++++.+....+.... .  . .+...++.++|
T Consensus        21 ~R~~~L~~~a~~l~~~~~~l~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  100 (443)
T cd07132          21 FRIQQLEALLRMLEENEDEIVEALAKDLRKPKFEAVLSEILLVKNEIKYAISNLPEWMKPEPVKKNLATLLDDVYIYKEP  100 (443)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCccCCCccccCCCceEEEEec
Confidence            455666666565566678899999999999999997559999999999999877655332211 1  1 23457899999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD  185 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~  185 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++ +|+|++++++++++....|+. +.+|
T Consensus       101 ~GVv~~I~p~N~P~~~~~~~~~~ALaaGN~VvlKps~~~~~~~~~l~~~~~~~-lp~gv~~vv~g~~~~~~~l~~-~~vd  178 (443)
T cd07132         101 LGVVLIIGAWNYPLQLTLVPLVGAIAAGNCVVIKPSEVSPATAKLLAELIPKY-LDKECYPVVLGGVEETTELLK-QRFD  178 (443)
T ss_pred             ccEEEEEcCCchhHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHHh-CCcCeEEEEeCCHHHHHHHHh-CCCC
Confidence            99999999999999999999999999999999999999999999999999985 999999999996655566775 5899


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus       179 ~V~fTGs~~~g~~i~~~a~-~~~~~~~lElgG~~p~iV~~dADl~~aa~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~f~  257 (443)
T cd07132         179 YIFYTGSTSVGKIVMQAAA-KHLTPVTLELGGKSPCYVDKSCDIDVAARRIAWGKFINAGQTCIAPDYVLCTPEVQEKFV  257 (443)
T ss_pred             EEEEECChHHHHHHHHHHH-hhCCceEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCceeCCcEEEEcHHHHHHHH
Confidence            9999999999999999887 589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++|.+.+++++.|+| ++++++||++++.+++++.+++++     +++++||... .+++|+.||++.++++++.++++|
T Consensus       258 ~~l~~~~~~~~~g~~-~~~~~~gpli~~~~~~~v~~~i~~-----a~~~~gg~~~-~~~~~~~Ptvl~~v~~~~~~~~eE  330 (443)
T cd07132         258 EALKKTLKEFYGEDP-KESPDYGRIINDRHFQRLKKLLSG-----GKVAIGGQTD-EKERYIAPTVLTDVKPSDPVMQEE  330 (443)
T ss_pred             HHHHHHHHHhcCCCC-CcccccCCcCCHHHHHHHHHHHhC-----CEEEeCCccC-CCCCEEeeEEEeCCCCCChHHhcc
Confidence            999999999999988 788999999999999999999863     4888988753 368899999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +|||++.++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       331 ~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~IN~~~~  389 (443)
T cd07132         331 IFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVCVNDTIM  389 (443)
T ss_pred             ccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEECCccc
Confidence            99999999999999999999999999999999999999999999999999999998753

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=100.00  E-value=8.6e-66  Score=522.34  Aligned_cols=372  Identities=28%  Similarity=0.429  Sum_probs=331.4

Q ss_pred             ccccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcc-cccC---CCc
Q psy5844          22 AAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT-IPIN---GDF   97 (442)
Q Consensus        22 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~   97 (442)
                      |..+++. .|.++++.......+.++.+++++++|+|||+.++...|+..+++.+++++..+++..+.. ....   .+.
T Consensus        14 w~~~~~~-~R~~~L~~~a~~l~~~~~el~~~~~~e~Gk~~~~~~~~Ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (426)
T cd07087          14 GKTRSLE-WRKAQLKALKRMLTENEEEIAAALYADLGKPPAEAYLTEIAVVLGEIDHALKHLKKWMKPRRVSVPLLLQPA   92 (426)
T ss_pred             cCCCCHH-HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHHhCCcccCCccccCCC
Confidence            3344433 4455555555555555788999999999999988875599999999999988776543321 1111   234


Q ss_pred             ceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhh
Q psy5844          98 FAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAA  177 (442)
Q Consensus        98 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~  177 (442)
                      ..+.+++|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.+ |+|+|++++++|+.+.+..
T Consensus        93 ~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~aGN~vvlKps~~~p~~~~~l~~~~~~-~~P~gv~~vv~g~~~~~~~  171 (426)
T cd07087          93 KAYVIPEPLGVVLIIGPWNYPLQLALAPLIGAIAAGNTVVLKPSELAPATSALLAKLIPK-YFDPEAVAVVEGGVEVATA  171 (426)
T ss_pred             ceEEEEecCcEEEEEcCCchHHHHHHHHHHHHHHcCCEEEEECCccCHHHHHHHHHHHHH-hCCCCEEEEEeCCchHHHH
Confidence            578899999999999999999999999999999999999999999999999999999999 6999999999986677889


Q ss_pred             hhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEc
Q psy5844         178 LVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQ  257 (442)
Q Consensus       178 l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~  257 (442)
                      |+.|| ++.|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|+++++||||
T Consensus       172 l~~~~-v~~V~ftGs~~~g~~i~~~a~-~~~~~~~lelgG~~~~iV~~dadl~~aa~~i~~~~~~~~GQ~C~a~~rv~V~  249 (426)
T cd07087         172 LLAEP-FDHIFFTGSPAVGKIVMEAAA-KHLTPVTLELGGKSPCIVDKDANLEVAARRIAWGKFLNAGQTCIAPDYVLVH  249 (426)
T ss_pred             HHhCC-CCEEEEeCChHHHHHHHHHHH-hhCCceEEeccCCCceEecCCCCHHHHHHHHHHHHHhccCCccccCCEEEEc
Confidence            99998 999999999999999999888 5889999999999999999999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcc
Q psy5844         258 DTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRD  337 (442)
Q Consensus       258 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~  337 (442)
                      ++++|+|+++|.+.+++++.|+|. +.+++||+++..+.+++.++++++     ++++||... .+|+|+.|||+.++.+
T Consensus       250 ~~i~d~f~~~L~~~~~~l~~~~~~-~~~~~gpli~~~~~~~~~~~i~~a-----~v~~gg~~~-~~g~~~~Ptvl~~~~~  322 (426)
T cd07087         250 ESIKDELIEELKKAIKEFYGEDPK-ESPDYGRIINERHFDRLASLLDDG-----KVVIGGQVD-KEERYIAPTILDDVSP  322 (426)
T ss_pred             HHHHHHHHHHHHHHHHHHcCCCCc-cCCCcCCCCCHHHHHHHHHHHhcc-----eEEeCCccC-CCCCEEeeEEEecCCC
Confidence            999999999999999999877664 689999999999999999999754     788888653 3688999999999999


Q ss_pred             hhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         338 DMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       338 ~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ++.++.+|+|||++.++.|++++|+++++|+.+++|+++|||+|.+.+.++.+++++|.|+||+...
T Consensus       323 ~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~iN~~~~  389 (426)
T cd07087         323 DSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVCVNDVLL  389 (426)
T ss_pred             CCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEEECCccc
Confidence            9999999999999999999999999999999999999999999999999999999999999998753

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=100.00  E-value=1.9e-65  Score=526.20  Aligned_cols=365  Identities=21%  Similarity=0.275  Sum_probs=312.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhch----hHHHHHHHHHHHHHHhHhhhcCccc---ccC-CC---cc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYS----VDVEYSLRTLRYYAGFADKIHGKTI---PIN-GD---FF   98 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~----~ev~~~~~~~~~~~~~~~~~~~~~~---~~~-~~---~~   98 (442)
                      .+..+++.......+.++.+++++++|+|||+.++..    .++.+.++.++|++....++.+...   +.. .+   ..
T Consensus       107 ~R~~vL~~~a~~l~~~~~elA~~~~~etGk~~~~a~e~gkp~~~~r~i~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~  186 (551)
T TIGR02288       107 ARAGVCLEILQRLNARSFEIAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAYREMSRIPETAVWEKPQGKNDPLKLK  186 (551)
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHHHHhCCCHHHHHhccChHHHHHHHHHHHHHHHHHHhccCcccccccCCCCCccccc
Confidence            3344444444444445778899999999999988842    2778889999999987766655432   111 11   12


Q ss_pred             eEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHH----HHHHHHHHhCCCCCcEEeecCC-c-
Q psy5844          99 AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTAL----AVGALIAEAGIPEGVVNIVPGY-G-  172 (442)
Q Consensus        99 ~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~----~l~~~l~~aglp~~~~~~v~~~-~-  172 (442)
                      .+..++|+|||++|+|||||+++.++++++||++||+||+|||+.+|+++.    .+.++|.++|+|+|++|++++. + 
T Consensus       187 ~~~~~~P~GVv~vI~PwNfP~~~~~~~l~~ALaaGN~VVlKPs~~tpl~~~~~~~~l~e~l~eAGlP~gvv~lv~g~~g~  266 (551)
T TIGR02288       187 KRFTIVPRGIALVIGCSTFPTWNTYPGLFASLATGNPVLVKPHPGAILPLALTVQVAREVLGEAGFDPNLVTLAAFDPGH  266 (551)
T ss_pred             ceEEEEecCeEEEEcCcccHHHHHHHHHHHHHHcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcChhHEEEecCCCcH
Confidence            234789999999999999999999999999999999999999999998654    6779999999999999999985 5 


Q ss_pred             cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCC
Q psy5844         173 DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGS  252 (442)
Q Consensus       173 ~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~  252 (442)
                      ++++.|+.||.++.|.||||+.+|+.|.+.++   .+++++|+|||||+||++|+|++.+++.+++++|.|+||.|++++
T Consensus       267 ~~~~~L~~~p~v~~I~FTGSt~~G~~I~~~aa---~~~v~lElGGknp~IV~~dADld~aa~~i~~~~f~~sGQ~Cta~~  343 (551)
T TIGR02288       267 EAAQRLATDPAVRIIDFTGSNAFGQWLEQNAR---QAQVYTEKAGVNTVIIESTDDYKAMLRNLAFSLSLYSGQMCTTTQ  343 (551)
T ss_pred             HHHHHHHhCCCccEEEEECCHHHHHHHHHhcc---cCcEEeecCCcCeEEEcCCCCHHHHHHHHHHHHHhhCCCCCCCCC
Confidence            78999999999999999999999999999876   379999999999999999999999999999999999999999999


Q ss_pred             EEEEcCc---------cHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--
Q psy5844         253 RTFVQDT---------IYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--  321 (442)
Q Consensus       253 ~v~V~~~---------~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--  321 (442)
                      |||||++         ++|+|+++|+++++++ +|||.++.+++||++++.+++++    ++++..| +++.||....  
T Consensus       344 ri~V~~~~i~~~~g~~i~def~~~L~~~~~~l-vGdp~~~~~~~Gplis~~~~~ri----~~a~~~G-~v~~gG~~~~~~  417 (551)
T TIGR02288       344 AILVPRDGIRTDQGRKSYDEVAADLATAIDGL-LGDPARATAVLGAIQSPDTLARI----AEARALG-EVLLASTKIEHP  417 (551)
T ss_pred             EEEEeccccccccchhHHHHHHHHHHHHHHHh-cCCcccccccccCcCCHHHHHHH----HHHHhCC-CEEEcCccCCCC
Confidence            9999999         7999999999999999 99999999999999999999996    4556678 5666664321  


Q ss_pred             -CCC-cccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcC--CCC-ceEEEecCCCChhhhhcccc----
Q psy5844         322 -DKG-FYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNS--DYG-LAAAVFTKDLDKTNYVTQGL----  392 (442)
Q Consensus       322 -~~g-~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~--~~g-l~~~v~s~d~~~~~~~~~~~----  392 (442)
                       ..| +|+.|||+....++|.++.+|+||||+.++.|++.+|+|+++|+.  ++| |+++|||+|.+.+.++.+.+    
T Consensus       418 ~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~  497 (551)
T TIGR02288       418 EFPGARVRTPLLLKCDAADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAA  497 (551)
T ss_pred             CCCCCEEeccEEEEcCCCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhc
Confidence             134 688999995333489999999999999999999999999999997  555 99999999999999999999    


Q ss_pred             ------EeeeEEeeCCH
Q psy5844         393 ------RAGTLIRFSSI  403 (442)
Q Consensus       393 ------~~G~V~vN~~~  403 (442)
                            .+|.|++|.+.
T Consensus       498 ~~l~iN~~G~v~vN~~~  514 (551)
T TIGR02288       498 VALSLNLTGGVFVNQSA  514 (551)
T ss_pred             cCeeecCCceEEEccCC
Confidence                  88899999853

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=100.00  E-value=1.1e-65  Score=566.66  Aligned_cols=362  Identities=31%  Similarity=0.480  Sum_probs=329.1

Q ss_pred             CCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceEE
Q psy5844          31 KPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCG  110 (442)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~  110 (442)
                      +..++.....+..+.++.++.++++|+|||+.++.. |+.++++.++||+.+++...+           ...++|+|||+
T Consensus       614 Ra~iL~raAdll~~~~~eL~~l~~~E~GKt~~ea~~-Ev~eaid~lr~ya~~a~~~~~-----------~~~~~P~GVv~  681 (1208)
T PRK11905        614 RAAILERAADLMEAHMPELFALAVREAGKTLANAIA-EVREAVDFLRYYAAQARRLLN-----------GPGHKPLGPVV  681 (1208)
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcC-----------CceecCccEEE
Confidence            334444443333344666799999999999999998 999999999999988765432           13578999999


Q ss_pred             EecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEee
Q psy5844         111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAF  189 (442)
Q Consensus       111 ~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~f  189 (442)
                      +|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++ +++..|+.||+++.|.|
T Consensus       682 ~IsPwNfPlai~~g~i~aALaaGN~VV~KPse~tpl~a~~l~~ll~eAGlP~gvl~lV~G~g~~vg~~Lv~~p~v~~V~F  761 (1208)
T PRK11905        682 CISPWNFPLAIFTGQIAAALVAGNTVLAKPAEQTPLIAARAVRLLHEAGVPKDALQLLPGDGRTVGAALVADPRIAGVMF  761 (1208)
T ss_pred             EEcCCcCHHHHHHHHHHHHHHcCCEEEEeCCcccHHHHHHHHHHHHHcCCCcccEEEeeCCchHHHHHHHcCCCcCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999987 79999999999999999


Q ss_pred             cCCHHHHHHHHhhccCC--CCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGAS--NLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      |||+.+|+.|.+.++++  ..+|+++|+|||||+||++|||++.|++.+++|+|.++||.|++++++|||++++|+|+++
T Consensus       762 TGSt~vg~~I~~~~A~~~~~~~pli~ElGGkN~~IV~~dAdle~Av~~iv~saF~~aGQ~CsA~~rl~V~~si~d~f~e~  841 (1208)
T PRK11905        762 TGSTEVARLIQRTLAKRSGPPVPLIAETGGQNAMIVDSSALPEQVVADVIASAFDSAGQRCSALRVLCLQEDVADRVLTM  841 (1208)
T ss_pred             eCCHHHHHHHHHHHHhhcCCCCeEEEecCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCccccCcEEEEehhHHHHHHHH
Confidence            99999999999988742  3589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-CCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |+++++++++|+|.+.++++||++++.+++++.++|+++...|+.+..++...+ ..|+|+.|||+. . .++..+.+|+
T Consensus       842 L~~~~~~l~vGdP~d~~t~~GPvId~~a~~~i~~~I~~a~~~G~~l~~g~~~~~~~~G~fv~PTVl~-~-~~~~~~~eEi  919 (1208)
T PRK11905        842 LKGAMDELRIGDPWRLSTDVGPVIDAEAQANIEAHIEAMRAAGRLVHQLPLPAETEKGTFVAPTLIE-I-DSISDLEREV  919 (1208)
T ss_pred             HHHHHHHhcCCCchhccCCccCccCHHHHHHHHHHHHHHHHCCCEEEEccCCCCCCCCeEEeeEEEe-c-CChHHhcCCc
Confidence            999999999999999999999999999999999999999999988887764322 468999999996 3 5677889999


Q ss_pred             cCCcccccccC--CHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH
Q psy5844         347 FGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV  406 (442)
Q Consensus       347 fgPvl~v~~~~--~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a  406 (442)
                      ||||+.++.|+  +++|+|+++|+.+|||+.+|||+|.+.+.++.+++++|+||||+....+
T Consensus       920 FGPVL~V~~y~~~dldeaI~~iN~t~yGLt~~I~S~d~~~~~~~~~~l~aGnvyIN~~~~ga  981 (1208)
T PRK11905        920 FGPVLHVVRFKADELDRVIDDINATGYGLTFGLHSRIDETIAHVTSRIRAGNIYVNRNIIGA  981 (1208)
T ss_pred             cCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhCCEeEEEECCCCCCC
Confidence            99999999997  6999999999999999999999999999999999999999999987655

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=100.00  E-value=2.8e-65  Score=516.02  Aligned_cols=358  Identities=17%  Similarity=0.236  Sum_probs=308.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHH--HHHHHHhHhhhcCcccccCCCcceEEEeeccc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRT--LRYYAGFADKIHGKTIPINGDFFAYTRHEPVG  107 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  107 (442)
                      ++.++++....+..+.++.+++++++|+|||+.+++. |+...+..  +++++.   ...+...+.+.+...++.++|+|
T Consensus        22 ~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~ea~~-~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P~G   97 (439)
T cd07081          22 MVDLIFRAAAEAAEDARIDLAKLAVSETGMGRVEDKV-IKNHFAAEYIYNVYKD---EKTCGVLTGDENGGTLIIAEPIG   97 (439)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChHHHHH-HHHHHHHHHHHHHHhc---cccCceecCCCCCceEEEEecce
Confidence            5666666666666666899999999999999999987 76655542  233322   11222222212345689999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCCc-cchhhhhcCC
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGYG-DAGAALVQHP  182 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~~-~~~~~l~~~~  182 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.    ++|+|+|++|++++.+ +.++.|+.||
T Consensus        98 VV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~~l~~aG~P~gvv~~v~g~~~~~g~~L~~~~  177 (439)
T cd07081          98 VVASITPSTNPTSTVIFKSLISLKTRNSIIFSPHPRAKKVTQRAATLLLQAAVAAGAPENLIGWIDNPSIELAQRLMKFP  177 (439)
T ss_pred             EEEEECCCcchHHHHHHHHHHHHhcCCeEEEECCccchHHHHHHHHHHHHHHHHcCCChhhEEEEcCCCHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999988888875    6799999999999866 8899999999


Q ss_pred             CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         183 GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       183 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      +++.|.||||+.+    .+.++ +++||+++|+|||+|+||++|||++.|++.+++++|.|+||.|++.+|||||+++||
T Consensus       178 ~V~~V~FTGs~~v----~~~aa-~~~k~~~lElGGk~p~IV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~V~~~i~d  252 (439)
T cd07081         178 GIGLLLATGGPAV----VKAAY-SSGKPAIGVGAGNTPVVIDETADIKRAVQSIVKSKTFDNGVICASEQSVIVVDSVYD  252 (439)
T ss_pred             CCCEEEEECCHHH----HHHHH-hcCCCEEEEcCCCCeEEEcCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEcHHHHH
Confidence            9999999999984    44455 478999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcc---cCCCCcccccc---eeccCc
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGR---AGDKGFYVQPT---VFANVR  336 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~---~~~~g~~v~pt---i~~~~~  336 (442)
                      +|+++|.++.               ||+++..+++++.++|+++...|++++ ||..   ....|+|+.|+   ++.++.
T Consensus       253 ~f~~~l~~~~---------------gpli~~~~~~~v~~~i~~a~~~Ga~~~-gg~~~~~~~~~G~~~~pt~~~i~~~~~  316 (439)
T cd07081         253 EVMRLFEGQG---------------AYKLTAEELQQVQPVILKNGDVNRDIV-GQDAYKIAAAAGLKVPQETRILIGEVT  316 (439)
T ss_pred             HHHHHHHHcC---------------CccCCHHHHHHHHHHHHhcCCcCCccc-CCCHHHHHHHcCCccCCCceEEEEecC
Confidence            9999998763               899999999999999999999999775 4432   11357899998   888877


Q ss_pred             --chhHHHHHhhcCCcccccccCCHHHHHHHHhcC----CCCceEEEecCC---CChhhhhccccEeeeEEeeCCH-HHH
Q psy5844         337 --DDMKIAREEIFGPVQQLIRFSSIEEVIERANNS----DYGLAAAVFTKD---LDKTNYVTQGLRAGTLIRFSSI-EEV  406 (442)
Q Consensus       337 --~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~----~~gl~~~v~s~d---~~~~~~~~~~~~~G~V~vN~~~-~~a  406 (442)
                        ++|.++++|+||||+.+++|++++|+|+++|+.    +|||+++|||+|   .++++++++++++|.|+||.+. ..+
T Consensus       317 ~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~iN~~~~~~~  396 (439)
T cd07081         317 SLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFVKNGPCSQGG  396 (439)
T ss_pred             CCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEEEeCCccccc
Confidence              899999999999999999999999999999864    899999999999   9999999999999999999776 677


Q ss_pred             HHhhcc
Q psy5844         407 IERANN  412 (442)
Q Consensus       407 v~~an~  412 (442)
                      +...++
T Consensus       397 ~g~~~~  402 (439)
T cd07081         397 LGDLYN  402 (439)
T ss_pred             cccccC
Confidence            776554

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=100.00  E-value=1.3e-63  Score=509.56  Aligned_cols=364  Identities=23%  Similarity=0.289  Sum_probs=321.1

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhc--Cccccc-------CCCcce
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIH--GKTIPI-------NGDFFA   99 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~--~~~~~~-------~~~~~~   99 (442)
                      .+|..++.+......+.++.+++++++|+|||..++.. |+..+++.+++++..+++..  +.....       ..+...
T Consensus        21 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gkp~~~~~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (454)
T cd07129          21 ARRAAFLEAIADEIEALGDELVARAHAETGLPEARLQG-ELGRTTGQLRLFADLVREGSWLDARIDPADPDRQPLPRPDL   99 (454)
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHcCCChHHHHH-HHHHHHHHHHHHHHHHHhcCCccccccccccccCCCCCccc
Confidence            35566666666666677888999999999999999987 99999999999998765421  211110       012345


Q ss_pred             EEEeeccceEEEecccccchHH--HHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCCc-
Q psy5844         100 YTRHEPVGVCGQIIPWNFPLLM--LAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGYG-  172 (442)
Q Consensus       100 ~~~~~P~Gvv~~i~p~n~P~~~--~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~~-  172 (442)
                      +.+++|+|||++|+|||||+..  .++++++||++||+||+|||+.+|.++.++.+++.    ++|+|+|++|+++|++ 
T Consensus       100 ~~~~~P~GvV~~I~p~N~P~~~~~~~~~~a~ALaaGN~VVlKps~~~p~t~~~l~~~~~~~l~~aGlP~gvv~~v~g~~~  179 (454)
T cd07129         100 RRMLVPLGPVAVFGASNFPLAFSVAGGDTASALAAGCPVVVKAHPAHPGTSELVARAIRAALRATGLPAGVFSLLQGGGR  179 (454)
T ss_pred             eEEeeccceEEEECCCCCchhhhhhhhhHHHHHHcCCeEEEEcCCCCchHHHHHHHHHHHHHHHhCCChhheEEeeCCcH
Confidence            7899999999999999999987  55899999999999999999999999999988774    8899999999999976 


Q ss_pred             cchhhhhcCCCccEEeecCCHHHHHHHHhhccCC-CCceeeeecCCCCceEEeCCC---CHHHHHHHHHHHhhccCCCcc
Q psy5844         173 DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGAS-NLKRTTLELGGKSPNIIFADA---DLDAAVEGAHFGLFFNMGQCC  248 (442)
Q Consensus       173 ~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~-~~~~~~~e~gG~~~~iV~~da---d~~~a~~~i~~~~~~~~Gq~C  248 (442)
                      +.+..|+.||.++.|+||||+.+|+.|.+.++++ +++|+++|+|||||+||++|+   |++.|++.+++++|.|+||.|
T Consensus       180 ~~~~~L~~~~~v~~V~fTGs~~~G~~i~~~aa~~~~~~p~~lElGG~n~~iV~~da~~~dl~~aa~~i~~~~~~~~GQ~C  259 (454)
T cd07129         180 EVGVALVKHPAIKAVGFTGSRRGGRALFDAAAARPEPIPFYAELGSVNPVFILPGALAERGEAIAQGFVGSLTLGAGQFC  259 (454)
T ss_pred             HHHHHHhcCCCccEEEEeCChHHHHHHHHHhhccCccceeEeecCCcCcEEEeCCcchHHHHHHHHHHHHHHhcCCCCee
Confidence            8899999999999999999999999999988842 699999999999999999999   899999999999999999999


Q ss_pred             cCCCEEEEcCc-cHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhc-CCEEEeCCcccCCCCcc
Q psy5844         249 CAGSRTFVQDT-IYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQ-GAQLVAGGGRAGDKGFY  326 (442)
Q Consensus       249 ~s~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~~~g~~  326 (442)
                      ++++|||||++ ++|+|+++|.++++++++          ||++++...++..+.++++++. |+++++||... .+++|
T Consensus       260 ~a~~rv~v~~~~i~d~f~~~l~~~~~~~~~----------g~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~-~~g~~  328 (454)
T cd07129         260 TNPGLVLVPAGPAGDAFIAALAEALAAAPA----------QTMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAA-EGGNQ  328 (454)
T ss_pred             cCCceEEEeCcccHHHHHHHHHHHHhccCC----------CCCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcC-CCCCc
Confidence            99999999999 999999999999998875          4677777788888899999888 99999999754 46899


Q ss_pred             cccceeccCc---chhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCC--CChhhhhcccc--EeeeEEe
Q psy5844         327 VQPTVFANVR---DDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKD--LDKTNYVTQGL--RAGTLIR  399 (442)
Q Consensus       327 v~pti~~~~~---~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d--~~~~~~~~~~~--~~G~V~v  399 (442)
                      ++|||+....   +++.++++|+||||+++..|++.+|+++++|+..++|+++|||+|  .+.++++++++  ++|.|+|
T Consensus       329 ~~Ptvl~~~~~~~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~i  408 (454)
T cd07129         329 AAPTLFKVDAAAFLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLLF  408 (454)
T ss_pred             cCCEEEEccCCccccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEEE
Confidence            9999997554   688999999999999999999999999999999999999999999  68999999998  6999999


Q ss_pred             eCCHH
Q psy5844         400 FSSIE  404 (442)
Q Consensus       400 N~~~~  404 (442)
                      |+...
T Consensus       409 N~~~~  413 (454)
T cd07129         409 NGWPT  413 (454)
T ss_pred             CCCCc
Confidence            97654

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=100.00  E-value=1.7e-63  Score=506.79  Aligned_cols=359  Identities=23%  Similarity=0.257  Sum_probs=319.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhh--cCccc-ccC--CCcceEEEee
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKI--HGKTI-PIN--GDFFAYTRHE  104 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~--~~~~~-~~~--~~~~~~~~~~  104 (442)
                      +|.+++........+.++.+++++++|+|||+ ++.. |+..+++.+++++..+...  .+... ..+  .+...+.+++
T Consensus        22 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~-ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (442)
T cd07084          22 KRADFLARIIQRLAAKSYDIAAGAVLVTGKGW-MFAE-NICGDQVQLRARAFVIYSYRIPHEPGNHLGQGLKQQSHGYRW   99 (442)
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHcCCch-hhhh-hhcchHHHHHHHHHHHHhccccccccccCCCCccccceEEee
Confidence            44555555555556668899999999999999 7776 9999999999999877543  11111 111  2345789999


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCC-CCCcEEeecCCccchhhhhcCCC
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI-PEGVVNIVPGYGDAGAALVQHPG  183 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~agl-p~~~~~~v~~~~~~~~~l~~~~~  183 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+ |++++++++|+++.+..|+.||+
T Consensus       100 P~Gvv~~I~p~N~P~~~~~~~~~~AL~aGN~vvlKps~~~p~~~~~l~~~l~~ag~~P~g~~~~v~g~~~~~~~l~~~~~  179 (442)
T cd07084         100 PYGPVLVIGAFNFPLWIPLLQLAGALAMGNPVIVKPHTAVSIVMQIMVRLLHYAGLLPPEDVTLINGDGKTMQALLLHPN  179 (442)
T ss_pred             cceeEEEEcCCccHhHHHHHHHHHHHHcCCeEEEECCCCchHHHHHHHHHHHHhCCCCccceEEeeCCcHHHHHHHcCCC
Confidence            99999999999999999999999999999999999999999999999999999999 99999999997678889999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCC-CHHHHHHHHHHHhhccCCCcccCCCEEEEcCc-cH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA-DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDT-IY  261 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~da-d~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~-~~  261 (442)
                      ++.|+||||+.+|+.|++.++.   +|+++|+|||||+||++|| |++.+++.+++++|.|+||.|++++|||||++ ++
T Consensus       180 v~~V~fTGs~~~g~~i~~~a~~---~~v~lElgG~~~~iV~~dadd~~~a~~~i~~~~~~~~GQ~C~a~~rl~V~~~~i~  256 (442)
T cd07084         180 PKMVLFTGSSRVAEKLALDAKQ---ARIYLELAGFNWKVLGPDAQAVDYVAWQCVQDMTACSGQKCTAQSMLFVPENWSK  256 (442)
T ss_pred             CCEEEEECCHHHHHHHHHhccC---CcEEEeccCcCcEEECCChhhHHHHHHHHHHHHhcccCCeecCCcEEEEeCCccH
Confidence            9999999999999999998762   8999999999999999999 69999999999999999999999999999999 99


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhc-CCEEEeCCcccC------CCCcccccceecc
Q psy5844         262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQ-GAQLVAGGGRAG------DKGFYVQPTVFAN  334 (442)
Q Consensus       262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~------~~g~~v~pti~~~  334 (442)
                      ++|+++|.+.++++++|     ++++||++++    ++.++++++..+ |+++++||....      ..|+|+.|||+.+
T Consensus       257 ~~f~~~l~~~~~~~~~g-----~~~~gpl~~~----~~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl~~  327 (442)
T cd07084         257 TPLVEKLKALLARRKLE-----DLLLGPVQTF----TTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALFVP  327 (442)
T ss_pred             HHHHHHHHHHHHhcccC-----ccccChhhhH----HHHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEEEe
Confidence            99999999999999998     6889999765    455566666777 589999987522      2489999999999


Q ss_pred             Ccchh---HHHHHhhcCCcccccccCC--HHHHHHHHhcCCCCceEEEecCCCChhhhhcccc-EeeeEEeeCC
Q psy5844         335 VRDDM---KIAREEIFGPVQQLIRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL-RAGTLIRFSS  402 (442)
Q Consensus       335 ~~~~~---~~~~~e~fgPvl~v~~~~~--~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~-~~G~V~vN~~  402 (442)
                      +++++   .++++|+||||++++.|++  .+|+++++|+.+++|+++|||+|.+.+.++++++ ++|+|++|+.
T Consensus       328 ~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~iN~~  401 (442)
T cd07084         328 IDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTYAILR  401 (442)
T ss_pred             cCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEEECCC
Confidence            98887   8999999999999999999  9999999999999999999999999999999999 9999999965

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=100.00  E-value=8.4e-63  Score=503.52  Aligned_cols=374  Identities=51%  Similarity=0.837  Sum_probs=343.7

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc-ccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~P~Gv  108 (442)
                      ++..+++.......+.++.++++++.|+|||..++.. |+..+++.+++++..+++..+... ....+...+.+++|+||
T Consensus        21 ~R~~~l~~~~~~l~~~~~~l~~~~~~etG~~~~~~~~-ei~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv   99 (432)
T cd07078          21 ERAAILRKLADLLEERREELAALETLETGKPIEEALG-EVARAADTFRYYAGLARRLHGEVIPSPDPGELAIVRREPLGV   99 (432)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEeecce
Confidence            3444444444444455678899999999999998888 999999999999988776655432 22256678899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++ +....|+.|++++.|
T Consensus       100 v~~i~p~N~P~~~~~~~~~~AL~aGN~vilkps~~~~~~~~~l~~~l~~ag~p~~~~~~~~~~~~~~~~~l~~~~~i~~v  179 (432)
T cd07078         100 VGAITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALLLAELLAEAGLPPGVLNVVTGDGDEVGAALASHPRVDKI  179 (432)
T ss_pred             EEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHcCCCcCcEEEEecCchHHHHHHhcCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999877 588999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||..+++.|.+.++ ++++|+++|+||++++||++|+|++.+++.+++++|.++||.|+++++||||++++++|+++
T Consensus       180 ~ftGs~~~~~~v~~~a~-~~~~~~~~e~gg~~~~iV~~~ad~~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~~~~~~  258 (432)
T cd07078         180 SFTGSTAVGKAIMRAAA-ENLKRVTLELGGKSPLIVFDDADLDAAVKGAVFGAFGNAGQVCTAASRLLVHESIYDEFVER  258 (432)
T ss_pred             EEECcHHHHHHHHHHHh-hccCcEEEecCCCCeeEECCCCCHHHHHHHHHHHHHhccCCCccCCceEEEcHHHHHHHHHH
Confidence            99999999999999888 57999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCC-CCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD-KGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |.++++++++|+|.|+++++||++++.+.+++.++++++...|+++++||..... .|+|+.|||+.+..+++.++.+|+
T Consensus       259 L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Ptv~~~~~~~~~~~~~E~  338 (432)
T cd07078         259 LVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPTVLTDVDPDMPIAQEEI  338 (432)
T ss_pred             HHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccEEEecCCCCChhhhCCC
Confidence            9999999999999999999999999999999999999999999999999876433 589999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      ||||++++.|++++|+++++|+.+++++++|||+|.+.+.++.+++.+|.|++|+....
T Consensus       339 fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~  397 (432)
T cd07078         339 FGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVWINDYSVG  397 (432)
T ss_pred             cCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC
Confidence            99999999999999999999999999999999999999999999999999999998765

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=100.00  E-value=3.5e-62  Score=503.26  Aligned_cols=368  Identities=19%  Similarity=0.222  Sum_probs=312.5

Q ss_pred             cccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhch----hHHHHHHHHHHHHHHhHhhhcCccccc-CCC-
Q psy5844          23 AAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYS----VDVEYSLRTLRYYAGFADKIHGKTIPI-NGD-   96 (442)
Q Consensus        23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~----~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~-   96 (442)
                      ..+++..|+..+++.+..+..+ ++.+++++++|+||++.++..    .|++++++.++|+.....++.++.... +.+ 
T Consensus       101 ~~~~~~~R~~il~~~a~~l~~~-~~ela~a~~~e~Gk~~~~a~qa~~~~evd~a~e~~~~a~~~~~~~~~~~~w~~~~~~  179 (549)
T cd07127         101 RDAGARARAGVCLEILQRLNAR-SFEMAHAVMHTTGQAFMMAFQAGGPHAQDRGLEAVAYAWREMSRIPPTAEWEKPQGK  179 (549)
T ss_pred             HhCCHHHHHHHHHHHHHHHHhC-HHHHHHHHHHHHCCCHHHHHhcccHHHHHHHHHHHHHHHHHHHhccccccccCCCCC
Confidence            3344344444444444445444 788899999999999988862    289999999999998776654432110 011 


Q ss_pred             -----cceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHH----HHHHHHHHHhCCCCCcEEe
Q psy5844          97 -----FFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA----LAVGALIAEAGIPEGVVNI  167 (442)
Q Consensus        97 -----~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~----~~l~~~l~~aglp~~~~~~  167 (442)
                           ......++|+||+++|+|||||+++.+..+++||++||+||+|||+.+|+++    ..+.++|.++|+|+|++|+
T Consensus       180 ~~~l~~~k~~~~~P~GVv~vI~p~nfP~~~~~~~i~~ALaaGN~VVvKPs~~a~ls~~~~~~~i~~~l~eAGlP~gvv~~  259 (549)
T cd07127         180 HDPLAMEKTFTVVPRGVALVIGCSTFPTWNGYPGLFASLATGNPVIVKPHPAAILPLAITVQVAREVLAEAGFDPNLVTL  259 (549)
T ss_pred             cccccccceeEEecccEEEEEeCcCChHHHHHHHHHHHHhcCCeEEEECCcccchhHHHHHHHHHHHHHHcCcCcccEEE
Confidence                 1224578999999999999999999999999999999999999999999875    4566899999999999999


Q ss_pred             ecCCc--cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCC
Q psy5844         168 VPGYG--DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMG  245 (442)
Q Consensus       168 v~~~~--~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~G  245 (442)
                      +++++  ++++.|+.||.++.|.||||+.+|+.|.+.++   .+|+++|+||||++||++|+|++.+++.+++++|.|+|
T Consensus       260 v~g~~~~~~~~~L~~~p~v~~I~FTGS~~~G~~i~~~a~---~~~v~~ElGGkn~~IV~~dADl~~aa~~i~~~~f~~sG  336 (549)
T cd07127         260 AADTPEEPIAQTLATRPEVRIIDFTGSNAFGDWLEANAR---QAQVYTEKAGVNTVVVDSTDDLKAMLRNLAFSLSLYSG  336 (549)
T ss_pred             EeCCCcHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHhc---cCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHccCC
Confidence            99853  78899999999999999999999999999876   37999999999999999999999999999999999999


Q ss_pred             CcccCCCEEEEcCc---------cHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeC
Q psy5844         246 QCCCAGSRTFVQDT---------IYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAG  316 (442)
Q Consensus       246 q~C~s~~~v~V~~~---------~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~g  316 (442)
                      |.|++++|||||++         +||+|+++|+++++++ +|||.+..+++||++++.+++++.+.    +..|. +++|
T Consensus       337 Q~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l-~Gdp~~~~~~~Gpli~~~~~~ri~~a----~~~g~-vl~g  410 (549)
T cd07127         337 QMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGL-LADPARAAALLGAIQSPDTLARIAEA----RQLGE-VLLA  410 (549)
T ss_pred             CCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHh-cCCccccccccCCcCCHHHHHHHHHH----HhCCC-EEEc
Confidence            99999999999999         8999999999999999 99999999999999999999998654    45565 7777


Q ss_pred             CcccC----CCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCC--C-CceEEEecCCCChhhhhc
Q psy5844         317 GGRAG----DKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSD--Y-GLAAAVFTKDLDKTNYVT  389 (442)
Q Consensus       317 g~~~~----~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~--~-gl~~~v~s~d~~~~~~~~  389 (442)
                      |....    ++++++.|||+....+++.++.+|+||||+.++.|++.+|+++++|+..  + +|+++|||+|...+.++.
T Consensus       411 g~~~~~~~~~g~~~~~Ptvl~~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~  490 (549)
T cd07127         411 SEAVAHPEFPDARVRTPLLLKLDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQ  490 (549)
T ss_pred             CCcCCCcCCCCceEEeCEEEEeCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHH
Confidence            76432    2335669999988788999999999999999999999999999999863  4 699999999999999998


Q ss_pred             ccc-Eee-eEEee
Q psy5844         390 QGL-RAG-TLIRF  400 (442)
Q Consensus       390 ~~~-~~G-~V~vN  400 (442)
                      ..+ .+| ++++|
T Consensus       491 ~~~~~~~~~~~iN  503 (549)
T cd07127         491 EAALDAGVALSIN  503 (549)
T ss_pred             HHHHHhcCcEEEc
Confidence            884 344 88888

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>KOG2456|consensus

Probab=100.00  E-value=1.9e-62  Score=461.72  Aligned_cols=354  Identities=26%  Similarity=0.401  Sum_probs=319.6

Q ss_pred             CccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc-ccccC---CCcceEEEeeccceEEEecccccc
Q psy5844          43 NEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPIN---GDFFAYTRHEPVGVCGQIIPWNFP  118 (442)
Q Consensus        43 ~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P  118 (442)
                      .+..+.+..++..+.+|+..|+...|+...++.++++....+..... .....   --...+++.+|+|||++|+|||||
T Consensus        38 ~e~e~~i~~Al~~DL~k~~~es~~~Ev~~~~~~i~~~l~~L~~wv~~~~v~~~~~t~~dk~~I~~~p~GvVLiI~~wNyP  117 (477)
T KOG2456|consen   38 QENEKEIIEALAADLHKPELESYLNEVGYVLNEIRYALENLPEWVKPEPVKKSFLTFLDKAYIEKEPLGVVLIIGPWNYP  117 (477)
T ss_pred             HhhHHHHHHHHHHHhccchhHHHHHHHHHHHHHHHHHHHhhHHhccccccCcccccccCceeEEecCCceEEEEccCCCc
Confidence            34456678999999999999999889999999999988666443221 11111   234578999999999999999999


Q ss_pred             hHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEeecCCHHHHHH
Q psy5844         119 LLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKL  198 (442)
Q Consensus       119 ~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~  198 (442)
                      +.+.+.++++||++||+||+|||+.+|.++..+++++.+. ++.+.+.+|.|..+....|+.+ +.|.|.||||+.+|+.
T Consensus       118 ~~L~l~PligAiAAGN~VVlKPSEls~n~a~~lakllp~Y-ld~~~~~VV~Ggv~ETt~LL~~-rfD~IfyTGsp~VgkI  195 (477)
T KOG2456|consen  118 LNLTLVPLIGAIAAGNAVVLKPSELSPNTAKLLAKLLPQY-LDQDLIRVVNGGVPETTELLKQ-RFDHIFYTGSPRVGKI  195 (477)
T ss_pred             ceeehhhhhhhhhcCCEEEechhhcChhHHHHHHHHHHHh-cCcceEEEecCCCchHHHHHHh-hccEEEecCCchHHHH
Confidence            9999999999999999999999999999999999999999 9999999999977444455555 7999999999999999


Q ss_pred             HHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHHHHHhhcccC
Q psy5844         199 VQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVG  278 (442)
Q Consensus       199 i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g  278 (442)
                      |+.+++ ++++||++|||||+|++|++|+|++-++++|+||++.|+||.|.++++|+++.+++..|+++++..++++ .|
T Consensus       196 im~aAa-KhLTPvtLELGGKsP~~vd~~~d~~ia~~RI~~gk~~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eF-YG  273 (477)
T KOG2456|consen  196 IMAAAA-KHLTPVTLELGGKSPCYVDKNCDLKIAARRIAWGKWMNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEF-YG  273 (477)
T ss_pred             HHHHHH-hcCCcEEEEcCCCCCeeecCCcCHHHHHHHHHHHhhccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHH-hC
Confidence            999999 6999999999999999999999999999999999999999999999999999999999999999999987 57


Q ss_pred             CCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCC
Q psy5844         279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSS  358 (442)
Q Consensus       279 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~  358 (442)
                      +..+.+.+++.+++..+++|+..+++..    ++++.||..+. ...|+.|||+.++.++.++++||+||||+++..+++
T Consensus       274 ~n~~eS~d~sRiIn~~hf~Rl~~ll~~~----~kv~~Gg~~d~-~d~~I~PTIL~DV~~~~p~M~eEIFGPiLPIi~v~~  348 (477)
T KOG2456|consen  274 ENPKESKDLSRIINQRHFQRLSALLDET----GKVAIGGESDE-SDRYIAPTILLDVPEDSPVMQEEIFGPILPIITVQS  348 (477)
T ss_pred             CCccccccHHHHhhHHHHHHHHHHhcCC----CceecCCccch-hhcccCCeEEecCCCCChhhhhhhccCccceeEhhh
Confidence            8788889999999999999999998642    68999998644 446999999999999999999999999999999999


Q ss_pred             HHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         359 IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       359 ~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      ++|+|+.+|+.+..|+.++||+|.....++.+++.+|.|.+|+...+
T Consensus       349 l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgvt~ND~i~H  395 (477)
T KOG2456|consen  349 LDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGVTVNDVIMH  395 (477)
T ss_pred             HHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCeeecceEEE
Confidence            99999999999999999999999999999999999999999998654

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=100.00  E-value=7.4e-63  Score=498.50  Aligned_cols=359  Identities=19%  Similarity=0.231  Sum_probs=305.7

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcc-c-c---cCCCcceEEEe
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT-I-P---INGDFFAYTRH  103 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~-~-~---~~~~~~~~~~~  103 (442)
                      .++.+++++......+..+.+++++++|+|||+.++..       +.+++++....   +.. . +   ...+...++++
T Consensus        26 ~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~-------~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~   95 (429)
T cd07121          26 ADREKIIEAIREALLSNAEELAEMAVEETGMGRVEDKI-------AKNHLAAEKTP---GTEDLTTTAWSGDNGLTLVEY   95 (429)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHH-------HHHHHHHHhcC---cccccccccccCCCcceEEEE
Confidence            35666777776666666888999999999999987643       34455443221   111 1 1   01223457889


Q ss_pred             eccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCCc-cchhhh
Q psy5844         104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGYG-DAGAAL  178 (442)
Q Consensus       104 ~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~~-~~~~~l  178 (442)
                      +|+|||++|+|||||+...++++++||++||+||+|||+.+|.++..++++++    ++|+|+|++|++++++ +.++.|
T Consensus        96 ~PlGVV~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKpse~tp~t~~~l~~l~~~~~~~aGlP~gvv~~v~g~~~~~~~~L  175 (429)
T cd07121          96 APFGVIGAITPSTNPTETIINNSISMLAAGNAVVFNPHPGAKKVSAYAVELINKAIAEAGGPDNLVVTVEEPTIETTNEL  175 (429)
T ss_pred             cccceEEEEccCCCchhHHHHHHHHHHHcCCCEEEECCccchhHHHHHHHHHHHHHHHcCCCcceEEEecCCChHHHHHH
Confidence            99999999999999999999999999999999999999999999999998874    7899999999999866 788999


Q ss_pred             hcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcC
Q psy5844         179 VQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQD  258 (442)
Q Consensus       179 ~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~  258 (442)
                      +.||+++.|.||||+.+|+.|++.     .+|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||+
T Consensus       176 ~~~~~v~~I~fTGs~~~g~~v~~~-----~k~~~lelGGk~p~iV~~dADld~Aa~~i~~~~~~n~GQ~C~a~~rv~V~~  250 (429)
T cd07121         176 MAHPDINLLVVTGGPAVVKAALSS-----GKKAIGAGAGNPPVVVDETADIEKAARDIVQGASFDNNLPCIAEKEVIAVD  250 (429)
T ss_pred             HcCCCccEEEeeCCHHHHHHHHhC-----CCceEeecCCCceEEEecCCCHHHHHHHHHhcccccCCCCCCccceEEEeH
Confidence            999999999999999999999874     489999999999999999999999999999999999999999999999999


Q ss_pred             ccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhc--CCEEEeCCccc---CCCCcccc---cc
Q psy5844         259 TIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQ--GAQLVAGGGRA---GDKGFYVQ---PT  330 (442)
Q Consensus       259 ~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~--Ga~~~~gg~~~---~~~g~~v~---pt  330 (442)
                      ++||+|+++|++. .              .++++..+.+++.++++++...  |++++.||...   +..|+|+.   ||
T Consensus       251 ~i~d~f~~~L~~~-~--------------~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~~~~~~pt  315 (429)
T cd07121         251 SVADYLIAAMQRN-G--------------AYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIEVPADIRL  315 (429)
T ss_pred             HHHHHHHHHHHHC-C--------------CEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCCCCCCCeE
Confidence            9999999999876 1              2478999999999999998864  68899887531   12477877   49


Q ss_pred             eeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCc--eEEEecCCCChhhhhccccEeeeEEeeCCHHHHHH
Q psy5844         331 VFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGL--AAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIE  408 (442)
Q Consensus       331 i~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl--~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~av~  408 (442)
                      ++.+++++|+++++|+||||++++.|++++|+++++|+..||+  +++|||+|.++++++++++++|.|++|.+..    
T Consensus       316 il~~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~iN~~~~----  391 (429)
T cd07121         316 IIVETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFVKNGPSY----  391 (429)
T ss_pred             EEEecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEEEcCCCc----
Confidence            9999999999999999999999999999999999999999998  9999999999999999999999999997753    


Q ss_pred             hhccCCccceeEEe
Q psy5844         409 RANNSDYGLAAAVF  422 (442)
Q Consensus       409 ~an~~~yGl~~~vf  422 (442)
                       .+...-|...|-|
T Consensus       392 -~~~p~gG~k~s~~  404 (429)
T cd07121         392 -AGLGVGGEGYTTF  404 (429)
T ss_pred             -CccccCCCccceE
Confidence             2223334455556

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=100.00  E-value=1.2e-62  Score=495.96  Aligned_cols=357  Identities=20%  Similarity=0.262  Sum_probs=307.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHH-HHHHHHHhHhhhcCcccccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLR-TLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  108 (442)
                      ++..+++.......+.++.+++++++|+|||+.+++..|+..+++ .+++++..  +..+.. ....+...+++++|+||
T Consensus        22 eR~~~L~~~a~~l~~~~eela~~~~~E~Gk~~~ea~~~e~~~~~~~~~~~~~~~--~~~g~~-~~~~~~~~~~~~~P~GV   98 (436)
T cd07122          22 QVDKIVEAVAWAAADAAEELAKMAVEETGMGVVEDKVIKNHFASEYVYNDIKDM--KTVGVI-EEDEEKGIVEIAEPVGV   98 (436)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcHHHHHHHHHHHHHHHHHHHhcC--cceeee-ccCCCCCeEEEeecccE
Confidence            445555555555556688889999999999999998657888887 77777752  222221 11134456889999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCCc-cchhhhhcCCC
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGYG-DAGAALVQHPG  183 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~~-~~~~~l~~~~~  183 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+.+++.    ++|+|+|++|+++|.+ +.++.|+.||+
T Consensus        99 v~~I~pwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~~l~eaG~P~g~v~~v~g~~~~~~~~l~~~~~  178 (436)
T cd07122          99 IAALIPSTNPTSTAIFKALIALKTRNAIIFSPHPRAKKCSIEAAKIMREAAVAAGAPEGLIQWIEEPSIELTQELMKHPD  178 (436)
T ss_pred             EEEEeCCCCchHHHHHHHHHHHHcCCcEEEECCcchhhHHHHHHHHHHHHHHHcCCCchhEEEecCCChHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999888865    7899999999999866 78899999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      ++.|.||||+.+++.    ++ .+++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+
T Consensus       179 v~~v~ftGs~~v~~~----a~-~~~~~~~~elgG~~p~iV~~dADl~~A~~~i~~~~f~~~GQ~C~a~~rv~V~~~i~d~  253 (436)
T cd07122         179 VDLILATGGPGMVKA----AY-SSGKPAIGVGPGNVPAYIDETADIKRAVKDIILSKTFDNGTICASEQSVIVDDEIYDE  253 (436)
T ss_pred             cCEEEEcCCHHHHHH----HH-hcCCCEEEecCCCCeEEEcCCCCHHHHHHHHHHHhhccCCCCCCCCCEEEEechhHHH
Confidence            999999999997654    33 4689999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhc-------ccCCC-CCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccC
Q psy5844         264 FVARSGERAKRR-------TVGDP-FDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANV  335 (442)
Q Consensus       264 f~~~l~~~~~~~-------~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~  335 (442)
                      |+++|+++...+       ++|++ .+.++.+||+++..+.+++..++..+..+|++++.++              ++++
T Consensus       254 f~~~l~~~~~~l~~~~~~~~v~~~~~~~~~~~gp~~~~~~~~~~~~~~~~~~~~ga~vl~~~--------------~~~v  319 (436)
T cd07122         254 VRAELKRRGAYFLNEEEKEKLEKALFDDGGTLNPDIVGKSAQKIAELAGIEVPEDTKVLVAE--------------ETGV  319 (436)
T ss_pred             HHHHHHHhcceecCHHHHHHHHHHhhcCCCCcCccccCcCHHHHHHHcCCCCCCCCeEEEEe--------------cCCC
Confidence            999999999887       88998 4677889999999999998888777777777777654              2455


Q ss_pred             cchhHHHHHhhcCCcccccccCCHHHHHHHHhcC----CCCceEEEecCCCChhhhhccccEeeeEEeeCCHH-HHHHh
Q psy5844         336 RDDMKIAREEIFGPVQQLIRFSSIEEVIERANNS----DYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE-EVIER  409 (442)
Q Consensus       336 ~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~----~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~-~av~~  409 (442)
                      .++|.+. +|.||||++++.|++++|+++++|+.    ++||+++|||+|..+++++++++++|.|+||.+.. ..+..
T Consensus       320 ~~~~~~~-~E~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~IN~~~~~~~~g~  397 (436)
T cd07122         320 GPEEPLS-REKLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRILVNTPSSLGGIGD  397 (436)
T ss_pred             CCCCcch-hcccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEEEeCCccccccCc
Confidence            6677765 67899999999999999999999986    79999999999999999999999999999998874 34443

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=100.00  E-value=5.2e-62  Score=496.07  Aligned_cols=347  Identities=18%  Similarity=0.248  Sum_probs=296.7

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHh---hhcCcccccCCCcceEEEeec
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFAD---KIHGKTIPINGDFFAYTRHEP  105 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~P  105 (442)
                      ..+.+++++......+.++.+++++++|+|||+.+++. +      .+++++....   ........ ..+...+++++|
T Consensus        58 ~~R~~~L~~la~~l~~~~~ela~~~~~E~Gk~~~ea~~-~------~~~~~~~~~~~~~~~~~~~~~-~~~~~~~v~~~P  129 (465)
T PRK15398         58 AMRQRIIDAIREALLPHAEELAELAVEETGMGRVEDKI-A------KNVAAAEKTPGVEDLTTEALT-GDNGLTLIEYAP  129 (465)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcHHHHH-H------HHHHHHHHhccccccccCccc-CCCceeEEEecc
Confidence            45666666666666677888999999999999998864 2      2344443321   11111111 123456788999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCCc-cchhhhhc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGYG-DAGAALVQ  180 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~~-~~~~~l~~  180 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.    ++|+|+|+++++++.+ +.++.|++
T Consensus       130 ~GVV~~I~PwN~P~~~~~~~ia~ALaaGN~VVlKps~~tp~t~~~l~~ll~~~l~eaGlP~gvv~vv~g~~~~~~~~L~~  209 (465)
T PRK15398        130 FGVIGAVTPSTNPTETIINNAISMLAAGNSVVFSPHPGAKKVSLRAIELLNEAIVAAGGPENLVVTVAEPTIETAQRLMK  209 (465)
T ss_pred             cEEEEEeeCCCCchHHHHHHHHHHHHhCCcEEEECCccchHHHHHHHHHHHHHHHHcCCCCCeEEEecCCCHHHHHHHHc
Confidence            999999999999999999999999999999999999999999999999876    6899999999999865 78899999


Q ss_pred             CCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCcc
Q psy5844         181 HPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTI  260 (442)
Q Consensus       181 ~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~  260 (442)
                      ||++|.|.||||+.+|+.|++     ..+|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||+++
T Consensus       210 ~~~vd~I~fTGS~~~G~~v~~-----~~k~~~~elGGk~p~IV~~dADld~Aa~~i~~g~~~n~GQ~C~A~~rvlV~~si  284 (465)
T PRK15398        210 HPGIALLVVTGGPAVVKAAMK-----SGKKAIGAGAGNPPVVVDETADIEKAARDIVKGASFDNNLPCIAEKEVIVVDSV  284 (465)
T ss_pred             CCCccEEEeeCCHHHHHHHHH-----cCCceeeecCCCceEEEecCCCHHHHHHHHHHhcccCCCCcCCCCceEEEeHHH
Confidence            999999999999999999988     248999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc---CCCCccc---ccceecc
Q psy5844         261 YDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA---GDKGFYV---QPTVFAN  334 (442)
Q Consensus       261 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~---~~~g~~v---~pti~~~  334 (442)
                      +|+|+++|++..               +|+++..+++++.++++++...+++++.|+...   +..|+++   .|||+.+
T Consensus       285 ~d~f~~~l~~~~---------------~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~~~~~~~tvl~~  349 (465)
T PRK15398        285 ADELMRLMEKNG---------------AVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGINVPKDTRLLIVE  349 (465)
T ss_pred             HHHHHHHHHHcC---------------CccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCCCCCCCCEEEec
Confidence            999999999761               378999999999999986543455666665421   1235565   3789999


Q ss_pred             CcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCc--eEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         335 VRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGL--AAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       335 ~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl--~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +++++.++.+|+||||+++..|++++|+++++|+..||+  +++|||+|.+++.++++++++|.|++|.+.
T Consensus       350 v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~iN~~~  420 (465)
T PRK15398        350 TDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFVKNGPS  420 (465)
T ss_pred             CCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEEECCCC
Confidence            999999999999999999999999999999999999988  999999999999999999999999999775

>KOG2454|consensus

Probab=100.00  E-value=4.3e-62  Score=455.03  Aligned_cols=399  Identities=28%  Similarity=0.431  Sum_probs=351.9

Q ss_pred             ccccccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc-ccccC---C
Q psy5844          20 YSAAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPIN---G   95 (442)
Q Consensus        20 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~---~   95 (442)
                      -+|.++++..|+..+.-..+++.. .++.+++..++++||+..+|..+|+-.+.+.+.|....-++.+.. ..+..   .
T Consensus       100 ktW~~ssF~~Rr~fL~~L~~yIi~-nQdliaevacrDtGKTmvDAs~GEIlvTlEKI~Wtl~~Ger~L~P~~Rpn~~~~~  178 (583)
T KOG2454|consen  100 KTWAQSSFKLRRQFLRILLKYIIE-NQDLIAEVACRDTGKTMVDASLGEILVTLEKITWTLSEGERWLKPESRPNGRAML  178 (583)
T ss_pred             hhhhhccHHHHHHHHHHHHHHHhh-chhheeeeeecccCchhhhhhHhHHHHHHHHhhhhhhcchhhcCCcCCCchhhee
Confidence            355666665566555444444433 256668889999999999999889999999999988655443321 11111   2


Q ss_pred             CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHH----HHHhCCCCCcEEeecCC
Q psy5844          96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGAL----IAEAGIPEGVVNIVPGY  171 (442)
Q Consensus        96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~----l~~aglp~~~~~~v~~~  171 (442)
                      -...+++++|+||+..|.|||||+.+.+.+++.||.+||++|+|-|+.+.++.....++    |+..|-|+++++++++-
T Consensus       179 yKg~~v~yePLGVI~aiVsWNYPfHN~lgPiiaAlFsGNaIVvK~SE~~~WS~~fy~e~ir~~L~a~g~~p~LVq~itcl  258 (583)
T KOG2454|consen  179 YKGSRVEYEPLGVIGAIVSWNYPFHNILGPIIAALFSGNAIVVKVSEHASWSGCFYFEIIRAALAAVGAPPNLVQVITCL  258 (583)
T ss_pred             eccceEEEeecceEEEeeecCCchhhhhhHHHHHHhcCCeEEEEeecceeeehhhHHHHHHHHHHHcCCCcchhheeecC
Confidence            24468999999999999999999999999999999999999999999999887665555    45559999999999998


Q ss_pred             ccchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCC
Q psy5844         172 GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAG  251 (442)
Q Consensus       172 ~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~  251 (442)
                      ++.+++|.+|+.++.+.|.||..+++.|++.++ ++++|+++|+|||+++|+++|+|++..+.-+++|.|..+||.|...
T Consensus       259 pd~a~~ltSh~g~khitFiGSqpvak~i~~~AA-k~LTPv~lELGGKDafIi~dda~l~~v~si~mRGtfQSsGQNCiGi  337 (583)
T KOG2454|consen  259 PDTAEALTSHSGVKHITFIGSQPVAKMIMRNAA-KTLTPVTLELGGKDAFIICDDADLSHVASIAMRGTFQSSGQNCIGI  337 (583)
T ss_pred             cchHhHhhcCCCcceEEEecCcHHHHHHHHhhh-hhcCcEEEeecCcccEEEeccccHHHHHHHHHhhhhhhcCCcccce
Confidence            899999999999999999999999999999998 5999999999999999999999999999999999999999999999


Q ss_pred             CEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc----CCCCccc
Q psy5844         252 SRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA----GDKGFYV  327 (442)
Q Consensus       252 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~v  327 (442)
                      +|++||+++||.|+..|.++++.++.|.|.....|||.|++.++++.++.++++|+++|+++..||.+.    ...|.|+
T Consensus       338 ER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhLesLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF  417 (583)
T KOG2454|consen  338 ERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHLESLVNDAVDKGARLAVGGSRFGHPKYPVGQYF  417 (583)
T ss_pred             eEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHHHHHHHHHHhhcchhhhcccccCCCCCCccccc
Confidence            999999999999999999999999999999999999999999999999999999999999999999864    2578999


Q ss_pred             ccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH-
Q psy5844         328 QPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV-  406 (442)
Q Consensus       328 ~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a-  406 (442)
                      +||++.++.++|+++++|.||||+.++++++.|++++++|++++||.++||+.|..+..+++.++..|.|-+|+-..-- 
T Consensus       418 ~PTlLvdvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG~sVFg~dk~~c~y~a~~lqtG~vAiNDFasfY~  497 (583)
T KOG2454|consen  418 PPTLLVDVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLGCSVFGGDKHRCKYIASQLQTGVVAINDFASFYM  497 (583)
T ss_pred             CCeEEEecCchhhhHhhhccccchhhhhcCChHHHHhhccCCcccccceeccccHHHHHHHHhhhhccceeehhhhhhhe
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999999864322 


Q ss_pred             ----HHhhccCCccceeE
Q psy5844         407 ----IERANNSDYGLAAA  420 (442)
Q Consensus       407 ----v~~an~~~yGl~~~  420 (442)
                          ....|+++||--++
T Consensus       498 cQlPFGG~k~SGyGrFaG  515 (583)
T KOG2454|consen  498 CQLPFGGVKDSGYGRFAG  515 (583)
T ss_pred             eccccCCccCCCcccccc
Confidence                23578888885544

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=100.00  E-value=4.2e-61  Score=492.22  Aligned_cols=354  Identities=16%  Similarity=0.140  Sum_probs=306.8

Q ss_pred             CCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccc
Q psy5844          28 PITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVG  107 (442)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  107 (442)
                      ..++.++++.......+.++.+++++++|+|||..+.+..+.......+.+++...+.. |. ...+.+...+..++|+|
T Consensus        29 ~~~R~~iL~~~a~~l~~~~~ela~~~~~E~Gk~~~~~~~~~~~~~~~~~~~~~~~~~~~-G~-~~~~~~~~~~~~~~PlG  106 (488)
T TIGR02518        29 QEQIDKIVKAIVDAAYENAVKLAKMANEETGFGKWEDKVIKNVFAATIVYDSIKDMKTI-GI-LSEDKEKKVIEIAVPVG  106 (488)
T ss_pred             HHHHHHHHHHHHHHHHhhHHHHHHHHHHHhCCChHHHHHHHHHHHHHHHHHHHhhCccc-ce-ecCCCCcceEEEEecce
Confidence            44667777777777777788999999999999998876422334445555554422222 32 22223455688999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHH----HHHHHHhCCCCCcEEeecCCc-cchhhhhcCC
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAV----GALIAEAGIPEGVVNIVPGYG-DAGAALVQHP  182 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l----~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~  182 (442)
                      ||++|+|||||+....+++++||++||+||+|||+.+|.++..+    .+++.++|+|+|++|++++.+ +.++.|+.||
T Consensus       107 VV~~I~P~n~P~~~~~~k~~~AL~aGNaVIlKps~~a~~s~~~~~~~l~~~l~eaGlP~gvv~~v~g~~~e~~~~L~~~~  186 (488)
T TIGR02518       107 VVAGLIPSTNPTSTAIYKTLISIKARNAIVFSPHPNAKKCIIETVKLMRKAAEEAGAPEGAIGCITVPTIEGTNELMKNK  186 (488)
T ss_pred             EEEEEcccCChHHHHHHHHHHHHHcCCcEEEECCccchHHHHHHHHHHHHHHHHcCcCcccEEEEcCCCHHHHHHHHhCC
Confidence            99999999999999999999999999999999999999999984    555578999999999999866 8899999999


Q ss_pred             CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         183 GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       183 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      +++.|.||||+..++.+.     .+.+|+++|+|||+|+||++|||++.|++.+++++|+|+||.|++.+|||||+++||
T Consensus       187 ~vd~V~fTGs~~v~~~a~-----~~~~pv~~e~gGn~p~iV~~dADld~Aa~~iv~sk~~~~Gq~C~a~~rllV~~~i~d  261 (488)
T TIGR02518       187 DTSLILATGGEAMVKAAY-----SSGTPAIGVGPGNGPAYIERTANVKKAVRDIIDSKTFDNGTICASEQSIIVEECNKD  261 (488)
T ss_pred             CcCEEEEeCCHHHHHHHH-----HcCCCEEEEcCCCCeEEEeCCCCHHHHHHHHHHHHhcCCCCCCCCCCEEEEeHHHHH
Confidence            999999999999776552     367999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHH-------HhhcccCCC-CCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceecc
Q psy5844         263 EFVARSGER-------AKRRTVGDP-FDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFAN  334 (442)
Q Consensus       263 ~f~~~l~~~-------~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~  334 (442)
                      +|+++|+++       .+.+++|+| .++++++||+++..+++++.++++.++.+|+++++||..              .
T Consensus       262 ~f~~~L~~~g~~~~~~~~~~~vg~~~~~~~~~~gp~i~~~~~~~i~~~i~~av~~gakll~gg~~--------------~  327 (488)
T TIGR02518       262 AVVEELKKQGGYFLTAEEAEKLGKFILRPNGTMNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQN--------------G  327 (488)
T ss_pred             HHHHHHHHhhhhhcCHHHHHhhcccccCCCCCcCcccccchHHHHHHHhccccCCCCEEEEeCCC--------------C
Confidence            999999998       899999996 678899999999999999999999999999999998852              1


Q ss_pred             CcchhHHHHHhhcCCcccccccCCHHHHHHHHhc----CCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         335 VRDDMKIAREEIFGPVQQLIRFSSIEEVIERANN----SDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       335 ~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~----~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +.++++. .+|+||||++++.|++++|||+++|+    .++||+++|||+|.+.+++|++++++|.|++|++.
T Consensus       328 v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta~I~T~d~~~a~~f~~~i~ag~V~VN~~~  399 (488)
T TIGR02518       328 VGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTLIIHSENKDIVREFALKKPVSRMLVNTGG  399 (488)
T ss_pred             CCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCC
Confidence            3444554 68999999999999999999999887    68999999999999999999999999999999654

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=100.00  E-value=2.4e-57  Score=440.60  Aligned_cols=373  Identities=32%  Similarity=0.487  Sum_probs=327.3

Q ss_pred             cccccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceE
Q psy5844          21 SAAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAY  100 (442)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (442)
                      .|..+++..|++-+.+.+..++.+ ......++++|.||++..+.. ||.+++++|+||+.+++...++           
T Consensus       165 ~W~atp~~eRAaiL~raAdlme~~-m~~L~~L~~REAGKtl~naIA-EVREAVDFlrYYA~~ar~~~g~-----------  231 (769)
T COG4230         165 IWSATPPAERAAILERAADLMEAQ-MPQLMGLLVREAGKTLSNAIA-EVREAVDFLRYYAGQARDTFGN-----------  231 (769)
T ss_pred             ccccCCHHHHHHHHHHHHHHHHHH-HHHHHHHHHHHhccchhhHHH-HHHHHHHHHHHHHHHHhcccCc-----------
Confidence            344445444444443333334333 334478889999999999999 9999999999999988643231           


Q ss_pred             EEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhh
Q psy5844         101 TRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALV  179 (442)
Q Consensus       101 ~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~  179 (442)
                      ....|+|+|+||+|||||+..+..+++.||++||+|+-||.+++|+.+..-.++++|+|+|++++|+++|++ .++..|+
T Consensus       232 ~~~~~~G~vVcISPWNFPLAIFtGqiaAAL~aGN~VlAKPAEqTpLIAa~aV~ll~eAGvP~~~lqLLpG~G~tvGa~L~  311 (769)
T COG4230         232 LTHRPLGPVVCISPWNFPLAIFTGQIAAALAAGNSVLAKPAEQTPLIAAQAVRLLHEAGVPPGVLQLLPGRGETVGAALT  311 (769)
T ss_pred             cccCCCCcEEEECCCCchHHHHHhHHHHHHHcCCccccCccccccHHHHHHHHHHHHcCCChhhHHhcCCCCcccchhhh
Confidence            456899999999999999999999999999999999999999999999999999999999999999999999 7999999


Q ss_pred             cCCCccEEeecCCHHHHHHHHhhccCC--CCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEc
Q psy5844         180 QHPGVDKVAFTGSTEVGKLVQQGSGAS--NLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQ  257 (442)
Q Consensus       180 ~~~~v~~v~ftGs~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~  257 (442)
                      .++++++|+||||+++++.|.+.++++  ...|++.|.||-|.+||+.+|--++++..++.|+|..+||+|.+.+.++++
T Consensus       312 ~darv~GV~FTGSTevA~li~~~LA~r~g~~~pLIAETGGqNAMIVDSsAL~EQVv~Dvl~SAFdSAGQRCSALRvLclQ  391 (769)
T COG4230         312 ADARVAGVMFTGSTEVARLIQRQLAKRQGRPIPLIAETGGQNAMIVDSSALAEQVVADVLASAFDSAGQRCSALRVLCLQ  391 (769)
T ss_pred             cCcccceEEEeCcHHHHHHHHHHHhhcCCCCCceEeccCCcceEEeechhhHHHHHHHHHHHHhhcccchhhhhhhhhhh
Confidence            999999999999999999999888753  457899999999999999999999999999999999999999999999999


Q ss_pred             CccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccC
Q psy5844         258 DTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANV  335 (442)
Q Consensus       258 ~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~  335 (442)
                      +++.|..++.|+-.+..+++|+|..-.+|+||+|+.+..+.+.++|+..+..|-.+.. -....  ..|.||.|++++  
T Consensus       392 ~DvAd~~l~mLKGAm~el~~G~p~~l~tDVGPVIdaEAk~~i~~Hi~~mr~~gr~v~q-~~~~~~~q~GtFv~Ptl~E--  468 (769)
T COG4230         392 EDVADRILTMLKGAMAELRVGNPDRLTTDVGPVIDAEAKANIEKHIQTMRSKGRLVHQ-AAAPNSLQKGTFVAPTLIE--  468 (769)
T ss_pred             hhHHHHHHHHHHHHHHHhccCCccceeccccccccHHHHHHHHHHHHHHHhcccchhh-ccCCCccCCceeeCceeEE--
Confidence            9999999999999999999999999999999999999999999999998887744332 22222  379999999996  


Q ss_pred             cchhHHHHHhhcCCcccccccCC--HHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHHHHh
Q psy5844         336 RDDMKIAREEIFGPVQQLIRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIER  409 (442)
Q Consensus       336 ~~~~~~~~~e~fgPvl~v~~~~~--~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~av~~  409 (442)
                      .+....++.|+||||+.+++|+.  +++.|+.+|.++|||+.+++|+-.+.+.++.....+|++|||.....++-.
T Consensus       469 l~~~~eL~rEVFGPVLHVvRy~~~~l~~vi~~INatGyGLT~GvHtRideti~~v~~~~~aGNlYVNRN~vGAVVG  544 (769)
T COG4230         469 LENLDELQREVFGPVLHVVRYKRDELDEVIDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLYVNRNIVGAVVG  544 (769)
T ss_pred             cCCHHHHHHHhccceeEEEEecHHHHHHHHHHHhccCcceeeeeecchHHHHHHHHhhccccceEeeccceeeEEe
Confidence            34556678999999999999975  699999999999999999999988899999999999999999998876543

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=100.00  E-value=1.6e-57  Score=457.75  Aligned_cols=325  Identities=18%  Similarity=0.169  Sum_probs=275.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChh----hhch-------hHHHHHHHHHHHHHHhHhhhcCccccc---CC
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYN----MSYS-------VDVEYSLRTLRYYAGFADKIHGKTIPI---NG   95 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~----~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~   95 (442)
                      ++.+++++......+.++.++++++.|+||+..    ++..       .|+..+++.+++++...+.. +...+.   +.
T Consensus        21 ~R~~~L~~~a~~l~~~~~~la~~~~~d~gk~~e~G~~~a~~~~l~~~~~ev~~~~~~~~~~a~~~~~~-g~~~~~~~~~~   99 (406)
T cd07079          21 QKNAALLAIADALEANRDEILEANAKDLAAAREAGLSEALLDRLLLTPERIEAMAEGLRQVAALPDPV-GEVLRGWTLPN   99 (406)
T ss_pred             HHHHHHHHHHHHHHhchHHHHHHhhhhHHHHHHcCCCHHHHhHhcCCHHHHHHHHHHHHHHHhcCCCC-cccccceeccC
Confidence            555666666565556788889999766666533    3321       28999999999998765432 433221   12


Q ss_pred             CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCC
Q psy5844          96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGY  171 (442)
Q Consensus        96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~  171 (442)
                      +...+++++|+|||++|+|| +| ...++++++||++||+||+|||+.+|.++..+++++.    ++|+|+|++|++++.
T Consensus       100 ~~~~~~~~~PlGVV~~I~p~-~p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~~l~~aG~P~gvv~~v~g~  177 (406)
T cd07079         100 GLQIEKVRVPLGVIGIIYES-RP-NVTVDAAALCLKSGNAVILRGGSEALHSNRALVEIIQEALEEAGLPEDAVQLIPDT  177 (406)
T ss_pred             ccceeEEecceEEEEEecCC-Cc-chHHHHHHHHHHhCCEEEEeCCchhhhHHHHHHHHHHHHHHHcCCCcccEEEecCC
Confidence            34568899999999999996 56 6788999999999999999999999999999999987    789999999999985


Q ss_pred             c--cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCccc
Q psy5844         172 G--DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCC  249 (442)
Q Consensus       172 ~--~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~  249 (442)
                      +  +.++.|..||+++.|+||||+.+|+.|++.+    ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|+
T Consensus       178 ~~~~~~~~l~~~~~v~~i~fTGS~~~G~~i~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~G-~C~  252 (406)
T cd07079         178 DREAVQELLKLDDYIDLIIPRGGAGLIRFVVENA----TIPVIKHGDGNCHVYVDESADLEMAVRIVVNAKTQRPS-VCN  252 (406)
T ss_pred             ChHHHHHHHcCCCCccEEEeCCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHcccCCCc-ccc
Confidence            3  5688899999999999999999999998765    58999999999999999999999999999999999999 999


Q ss_pred             CCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCccccc
Q psy5844         250 AGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQP  329 (442)
Q Consensus       250 s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~p  329 (442)
                      +++|||||+++||+|+++|++.+++.                                  |++++ +|...   ..|+.|
T Consensus       253 a~~rv~V~~si~d~f~~~l~~~~~~~----------------------------------ga~~~-~g~~~---~~~~~p  294 (406)
T cd07079         253 ALETLLVHRDIAEEFLPKLAEALREA----------------------------------GVELR-GDEET---LAILPG  294 (406)
T ss_pred             cceeEEEeHHHHHHHHHHHHHHHHHC----------------------------------CCEEe-cCHHH---HHhccc
Confidence            99999999999999999999887652                                  45544 33221   137778


Q ss_pred             ceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         330 TVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       330 ti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +    ++++|.++++|+||||+++++|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||++..
T Consensus       295 t----v~~d~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~iN~~~~  365 (406)
T cd07079         295 A----KPATEEDWGTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVYVNASTR  365 (406)
T ss_pred             c----cCCCcchhhhhhhCceeEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEEEeCCCc
Confidence            8    6788999999999999999999999999999999999999999999999999999999999999998753

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=100.00  E-value=4.8e-57  Score=450.61  Aligned_cols=341  Identities=17%  Similarity=0.141  Sum_probs=285.4

Q ss_pred             CCCCCccccchhhhcCccccHHHHH------HHHHcCCCh------hhhchhHHHHHHHHHHHHHHhHhhhcCccccc--
Q psy5844          28 PITKPKIEHTQLFINNEFVNAQSSL------ETLDNGKPY------NMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI--   93 (442)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~------~~~e~Gk~~------~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~--   93 (442)
                      +.++..+++.......+.++.++++      +++|+|||.      .++.. |+..+++.+++++..++.. ++.++.  
T Consensus        13 ~~~R~~~L~~~a~~l~~~~~~la~~~~~d~a~~~E~Gk~~~~~~~l~~a~~-ev~~~~~~~~~~a~~a~~~-g~~~~~~~   90 (398)
T TIGR00407        13 TAEKNDALSKIADGLEAQAPAILAANAKDIAVAKENGLADALLDRLLLTEG-RLKGIADGVKDVIELADPV-GKVIDGRE   90 (398)
T ss_pred             HHHHHHHHHHHHHHHHhChHHHHHHhHHHHHHHHHcCCCHHHHHHHcCCHH-HHHHHHHHHHHHhcCCCCC-ccccccee
Confidence            3456677777777777778888888      899999994      34666 9999999999999887654 544432  


Q ss_pred             -CCCcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHH----HHHhCCCCCcEEee
Q psy5844          94 -NGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGAL----IAEAGIPEGVVNIV  168 (442)
Q Consensus        94 -~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~----l~~aglp~~~~~~v  168 (442)
                       ..+...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..++++    |.++|+|+|++|++
T Consensus        91 ~~~~~~~~~~~~PlGVV~~I~pw~-p-~~~~~~~~~ALaaGN~vVlKps~~tp~~~~~l~~~~~~al~eaGlP~gvv~~v  168 (398)
T TIGR00407        91 LDSGLTLERVRVPLGVLGVIYEAR-P-NVTVDIASLCLKTGNAVILRGGKEAVRSNKALVEVIQDALAQTGLPVGAVQLI  168 (398)
T ss_pred             cCCCceEEEEEeCcEEEEEEeCCC-c-hHHHHHHHHHHHhCCeEEECCChhhHHHHHHHHHHHHHHHHHcCCChhHEEEe
Confidence             13556789999999999999997 7 67888999999999999999999999999999999    55999999999999


Q ss_pred             cCCc--cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCC
Q psy5844         169 PGYG--DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQ  246 (442)
Q Consensus       169 ~~~~--~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq  246 (442)
                      ++.+  +.++.|..||+++.|+||||+.+++.+.+.    ..+|+++|+|||||+||++|||++.|++.+++++|.+ ||
T Consensus       169 ~g~~~~~~~~~l~~~~~v~~v~fTGs~~vg~~~~~~----~~~~~~~e~gGk~p~iV~~dADl~~Aa~~iv~~~~~~-GQ  243 (398)
T TIGR00407       169 ETPSRELVSELLDLDEYIDLLIPRGGNGLVRLIKQT----STIPVLGHGDGICHIYLDESADLIKAIKVIVNAKTQR-PS  243 (398)
T ss_pred             cCCCHHHHHHHHhCCCCeeEEEecCCHHHHHHHHHh----CCCCEEEecCCcceEEEeCCCCHHHHHHHHHhhhcCC-CC
Confidence            9743  478889999999999999999999998874    4579999999999999999999999999999999975 99


Q ss_pred             cccCCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcc
Q psy5844         247 CCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFY  326 (442)
Q Consensus       247 ~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~  326 (442)
                      .|++++|+|||+++||+|+++|.+.++++++        .+++      .+.+.+++.    .|      |         
T Consensus       244 ~C~a~~rv~V~~~v~d~f~~~l~~~~~~~~~--------~~~~------~~~i~~~v~----~g------~---------  290 (398)
T TIGR00407       244 TCNAIETLLVNKAIAREFLPVLENQLLEKGV--------TIHA------DAYALKLLE----LG------P---------  290 (398)
T ss_pred             cccccceEEEeHHHHHHHHHHHHHHHHhcCC--------EEec------CHHHHHHHh----cc------C---------
Confidence            9999999999999999999999999987642        2222      134444442    11      1         


Q ss_pred             cccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH
Q psy5844         327 VQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV  406 (442)
Q Consensus       327 v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a  406 (442)
                        ||++ ++  .+.++++|+||||++++.|++++|+++++|+.++||+++|||+|.++++++++++++|.|+||++..  
T Consensus       291 --~tv~-~~--~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~iN~~~~--  363 (398)
T TIGR00407       291 --ATEA-IV--CKTDFDKEFLSLDLSVKIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVYHNASTR--  363 (398)
T ss_pred             --cccc-cc--ccccccchhhCceeEEEEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCC--
Confidence              2333 22  2567889999999999999999999999999999999999999999999999999999999999863  


Q ss_pred             HHhhccCCcccee
Q psy5844         407 IERANNSDYGLAA  419 (442)
Q Consensus       407 v~~an~~~yGl~~  419 (442)
                        .....+||++.
T Consensus       364 --~~~~~pfG~~~  374 (398)
T TIGR00407       364 --FTDGFRFGFGA  374 (398)
T ss_pred             --cCCCcccccce
Confidence              22234677653

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=100.00  E-value=1.2e-56  Score=452.81  Aligned_cols=326  Identities=19%  Similarity=0.169  Sum_probs=275.4

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCCh----hhhch-------hHHHHHHHHHHHHHHhHhhhcCccccc---C
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPY----NMSYS-------VDVEYSLRTLRYYAGFADKIHGKTIPI---N   94 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~----~~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~   94 (442)
                      ..+.++++.......+.++.+++++++|+||+.    .++..       .|+..+++.+++++.+++.. +...+.   +
T Consensus        26 ~~R~~~L~~~a~~l~~~~~~la~~~~~d~g~~~~~g~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~-g~~~~~~~~~  104 (417)
T PRK00197         26 AQKNRALLAIADALEANAAEILAANAKDLAAARANGLSAAMLDRLLLTEARIEGIAEGLRQVAALPDPV-GEVLDGWTLP  104 (417)
T ss_pred             HHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHcCCCHHHHHHhcCCHHHHHHHHHHHHHHhhcCCCc-cccccceecC
Confidence            345556666655555667888999998887774    34431       28899999999998776543 443322   2


Q ss_pred             CCcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHH----HHhCCCCCcEEeecC
Q psy5844          95 GDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALI----AEAGIPEGVVNIVPG  170 (442)
Q Consensus        95 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l----~~aglp~~~~~~v~~  170 (442)
                      .+...+.+++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++    .++|+|+|++|++++
T Consensus       105 ~~~~~~~~~~PlGVv~~I~p~p-~-~~~~~~~~~ALaaGN~vVlKPs~~tp~t~~~l~~l~~~~l~~aGlP~gv~~~v~g  182 (417)
T PRK00197        105 NGLRIGRVRVPLGVIGVIYESR-P-NVTVDAAALCLKSGNAVILRGGSEAIHSNRALVAVIQEALEEAGLPADAVQLVET  182 (417)
T ss_pred             CCceEEEEecCceEEEEEcCCC-c-hHHHHHHHHHHHhCCeEEEecChhhhHHHHHHHHHHHHHHHHcCcChhhEEEecC
Confidence            2345789999999999999986 4 678899999999999999999999999999998885    688999999999996


Q ss_pred             Cc--cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcc
Q psy5844         171 YG--DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCC  248 (442)
Q Consensus       171 ~~--~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C  248 (442)
                      .+  +.+..|..||+++.|+||||+.+|+.+++.+    ++|+++|+|||||+||++|||++.|++.+++++|.|+| .|
T Consensus       183 ~~~~~~~~~l~~~~~v~~V~fTGS~~~g~~i~~~a----~~~~~lELGGk~p~IV~~dAdl~~Aa~~iv~~~~~n~G-~C  257 (417)
T PRK00197        183 TDRAAVGELLKLDGYVDVIIPRGGAGLIRRVVENA----TVPVIEHGDGICHIYVDESADLDKALKIVLNAKTQRPS-VC  257 (417)
T ss_pred             CChHHHHHHhccCCCccEEEecCCHHHHHHHHHhc----CCCEEeecCCcceEEEeCCCCHHHHHHHHHHhccCCCc-cc
Confidence            43  4778888899999999999999999999853    58999999999999999999999999999999999999 99


Q ss_pred             cCCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccc
Q psy5844         249 CAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQ  328 (442)
Q Consensus       249 ~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~  328 (442)
                      ++++|+|||+++||+|+++|++.+++++++.                                  . ++...  .+ |+ 
T Consensus       258 ~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~----------------------------------~-~~~~~--~~-~~-  298 (417)
T PRK00197        258 NALETLLVHEAIAEEFLPKLAEALAEAGVEL----------------------------------R-GDEAA--LA-LL-  298 (417)
T ss_pred             ccceEEEEEHHHhHHHHHHHHHHHHHCCCeE----------------------------------e-cCHHH--HH-hh-
Confidence            9999999999999999999999998875321                                  1 11100  11 33 


Q ss_pred             cceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         329 PTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       329 pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |||+   ..++.++++|+||||+++++|++++|+|+++|++++||+++|||+|.+++.++++++++|.|+||+...
T Consensus       299 PTi~---~~~~~i~~eE~FGPVl~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~VN~~~~  371 (417)
T PRK00197        299 PDVV---PATEEDWDTEYLDLILAVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVYVNASTR  371 (417)
T ss_pred             cccc---cCCcchhhhhhhCceEEEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEEEeCCCc
Confidence            9997   356888999999999999999999999999999999999999999999999999999999999998653

>KOG2455|consensus

Probab=100.00  E-value=4.4e-56  Score=420.94  Aligned_cols=405  Identities=24%  Similarity=0.380  Sum_probs=356.8

Q ss_pred             cccccCCCCCCCccccch-hhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcc
Q psy5844          21 SAAAVPKPITKPKIEHTQ-LFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFF   98 (442)
Q Consensus        21 ~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~   98 (442)
                      .|-..+.. ++..++.++ ..+.++++..+....++-+||+..+|..+-..+.++++|+.+.++..+....... ..+..
T Consensus       111 ~W~~~Pia-dR~aI~lkAAdlistkyr~~l~aatMlgqgKt~~qAeiDa~~eLidf~R~na~ya~eL~~~qpi~~~~~t~  189 (561)
T KOG2455|consen  111 TWELVPIA-DRLAIFLKAADLISTKYRYDLLAATMLGQGKTAIQAEIDAAAELIDFFRFNAKYASELYAQQPISQTKGTW  189 (561)
T ss_pred             ccccCcHH-HHHHHHHHHHHHhcchHHHHHHHHHHhcCCcchHHHHHHHHHHHHHHHHHhHHHHHHhhhcCCccccCCCC
Confidence            34444433 455555555 5577799888888888999999999987447899999999999987776543332 36677


Q ss_pred             eEEEeecc-ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchh
Q psy5844          99 AYTRHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGA  176 (442)
Q Consensus        99 ~~~~~~P~-Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~  176 (442)
                      +..+++|+ |.|..|+||||.....-...+||| +||+|+||||..+.++...+.++|+|||+|+|++|+||+++ ..++
T Consensus       190 ns~~yRpleGFVaAisPFnftAI~gnLa~aPaL-MGN~VLwkPS~ta~lssYii~~il~EAGlP~GvinFvPad~~~f~d  268 (561)
T KOG2455|consen  190 NSMEYRPLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAALSSYIIYRILREAGLPPGVINFVPADGPLFGD  268 (561)
T ss_pred             cceeeccccceeEEecccceeeeccccccChhh-hcceeeecccchhHHHHHHHHHHHHHcCCCccceeeccCCCCeecc
Confidence            88889998 999999999999887777788888 99999999999999999999999999999999999999999 9999


Q ss_pred             hhhcCCCccEEeecCCHHHHHHHHhhccC-----CCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCC
Q psy5844         177 ALVQHPGVDKVAFTGSTEVGKLVQQGSGA-----SNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAG  251 (442)
Q Consensus       177 ~l~~~~~v~~v~ftGs~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~  251 (442)
                      .+..+|...++.||||+.+-+.+.+..+.     .+..+++.|.||||.-+|+++||++.++...++++|.++||.|.+.
T Consensus       269 tita~~hfaglnftgS~~~fk~lwk~V~~n~~~Y~~fPrlvgEcgGkNFHfVH~SA~VesvV~~TvrsAfey~GQkcsA~  348 (561)
T KOG2455|consen  269 TITASPHFAGLNFTGSVPTFKHLWKKVGENVDNYRTFPRLVGECGGKNFHFVHASADVESVVSSTVRSAFEYQGQKCSAC  348 (561)
T ss_pred             eeccCcccceeeeecccHHHHHHHHHHHhhhhhhhcchhhhccCCCcceEEeccccchHHHHHHHHHHHHhhcccccchh
Confidence            99999999999999999999998876653     3578999999999999999999999999999999999999999999


Q ss_pred             CEEEEcCccHHHHHHHHHHHHhhcccCCC-CCCCCccCcCCCHHHHHHHHHHHHHHHhc-CCEEEeCCcccCCCCccccc
Q psy5844         252 SRTFVQDTIYDEFVARSGERAKRRTVGDP-FDLNVEQGPQIDKEQMDKILEFIESGKSQ-GAQLVAGGGRAGDKGFYVQP  329 (442)
Q Consensus       252 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~~-Ga~~~~gg~~~~~~g~~v~p  329 (442)
                      +|+||+++.+..+.++|.+.-+++++||| .|.++++||+|+...++|++++|+.++.. ..++++||++++..|+||.|
T Consensus       349 SRmYvp~s~wp~i~e~l~~~~~q~~igd~~~d~~~f~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~P  428 (561)
T KOG2455|consen  349 SRMYVPESLWPQIREELVEEHSQLKIGDPVIDFSTFIGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEP  428 (561)
T ss_pred             hhcccchhhcHHHHHHHHHHHhhcccCCccccccchhhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecc
Confidence            99999999999999999999999999998 88899999999999999999999999864 46899999999999999999


Q ss_pred             ceeccCcchhHHHHHhhcCCcccccccCC--HHHHHHHHh-cCCCCceEEEecCCCChhhhhccccE--eeeEEeeCCHH
Q psy5844         330 TVFANVRDDMKIAREEIFGPVQQLIRFSS--IEEVIERAN-NSDYGLAAAVFTKDLDKTNYVTQGLR--AGTLIRFSSIE  404 (442)
Q Consensus       330 ti~~~~~~~~~~~~~e~fgPvl~v~~~~~--~~eai~~an-~~~~gl~~~v~s~d~~~~~~~~~~~~--~G~V~vN~~~~  404 (442)
                      ||+..-.+..+++.+|+||||++|+.|++  ++|+++++. .+.|+|+.+||+.|.+...+..+.++  +|+.|+|+--+
T Consensus       429 Tiv~~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~aAgNfYiNdKcT  508 (561)
T KOG2455|consen  429 TIVLSKDPKDPIMTEEIFGPVLSVYVYEDDKFDEVLKLVDNTTPYALTGAIFAQDREVVLHALDVLRMAAGNFYINDKCT  508 (561)
T ss_pred             eEEEccCCCcchhhhhccCceeEEEEeccccHHHHHHHHhcCCcceeccccccccHHHHHHHHHHHHhhhcceEEccccc
Confidence            99998889999999999999999999987  699999985 57899999999999998888888886  88999999887


Q ss_pred             HHHHhhccCCccceeEEeccChhHH
Q psy5844         405 EVIERANNSDYGLAAAVFTKDLDKT  429 (442)
Q Consensus       405 ~av~~an~~~yGl~~~vft~d~~~~  429 (442)
                      .++-.  .++||.+...=|+|+...
T Consensus       509 Gsvvg--qqpFGGaR~SGTNDKaGg  531 (561)
T KOG2455|consen  509 GSVVG--QQPFGGARLSGTNDKAGG  531 (561)
T ss_pred             cceee--ccccCcccccCCCCCCCC
Confidence            65433  578888877777776543

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=100.00  E-value=1e-55  Score=469.32  Aligned_cols=321  Identities=16%  Similarity=0.167  Sum_probs=276.2

Q ss_pred             CCCccccchhhhcCccccHHHHHH------HHHcC--CChhhhc---hhHHHHHHHHHHHHHHhHhhhcCcccc---cCC
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLE------TLDNG--KPYNMSY---SVDVEYSLRTLRYYAGFADKIHGKTIP---ING   95 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~------~~e~G--k~~~~a~---~~ev~~~~~~~~~~~~~~~~~~~~~~~---~~~   95 (442)
                      .+..+++.......+..+.+++++      ++|+|  ||+.++.   ..|+..+++.++|++... +..++..+   .+.
T Consensus       317 eR~~~L~~~a~~l~~~~~ela~~~~~d~~~~~E~G~~k~~~~~~~~~~~ev~~~~~~~~~~a~~~-~~~g~~~~~~~~~~  395 (718)
T PLN02418        317 ERKKILLDVADALEANEELIKAENELDVAAAQEAGYEKSLVSRLTLKPGKIASLAASIRQLADME-DPIGRVLKRTEVAD  395 (718)
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhHHHHHHhCCchhHHHHHhccHHHHHHHHHHHHHHhcCc-cccCccccccccCC
Confidence            445555555555555567778885      77999  8888874   339999999999999874 34354333   123


Q ss_pred             CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCc----EEeecCC
Q psy5844          96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGV----VNIVPGY  171 (442)
Q Consensus        96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~----~~~v~~~  171 (442)
                      +...+..++|+|||++|+||| |+... +++++||++||+||+|||+.+|.++..+++++.++ +|+|+    +|+++|.
T Consensus       396 ~~~~~~~r~PlGVV~~I~Pwn-P~~~~-~kiapALaaGNtVVlKPse~tp~s~~~l~~l~~eA-lP~gv~~~v~nvv~g~  472 (718)
T PLN02418        396 GLVLEKTSCPLGVLLIIFESR-PDALV-QIASLAIRSGNGLLLKGGKEAARSNAILHKVITDA-IPKTVGGKLIGLVTSR  472 (718)
T ss_pred             CceEEEEEEeeeEEEEEeCCC-cHHHH-HHHHHHHHhCCEEEEeCCccchHHHHHHHHHHHHH-ccccCCcceEEEeCCc
Confidence            444688999999999999999 99998 89999999999999999999999999999999999 99996    9999974


Q ss_pred             ccchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCC
Q psy5844         172 GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAG  251 (442)
Q Consensus       172 ~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~  251 (442)
                      .+.++.|..||.++.|+||||+..+..+   ++ .++||+++|+|||+|+||++|||++.|++.+++++|.| ||.|++.
T Consensus       473 ~~~g~~L~~~~~v~~V~FTGSt~~i~~~---aa-~~~k~v~lELGGk~p~iV~~DADld~A~~~i~~~~~~n-GQ~C~a~  547 (718)
T PLN02418        473 DEIPDLLKLDDVIDLVIPRGSNKLVSQI---KA-STKIPVLGHADGICHVYVDKSADMDMAKRIVVDAKTDY-PAACNAM  547 (718)
T ss_pred             HHHHHHHhhCCCCCEEEEeCCHHHHHHH---HH-hcCCCEEEeCCCcceEEEeCCCCHHHHHHHHHHHhCCC-CCccccC
Confidence            4788999999999999999999755554   33 46899999999999999999999999999999999999 9999999


Q ss_pred             CEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccce
Q psy5844         252 SRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTV  331 (442)
Q Consensus       252 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti  331 (442)
                      +|+|||+++||+                        |         .+..+|++++++|+++ +||.+..  |      +
T Consensus       548 ~RllVh~~i~d~------------------------G---------~~~~~i~~a~~~Ga~l-~Gg~~~~--g------~  585 (718)
T PLN02418        548 ETLLVHKDLVQN------------------------G---------GLNDLLVALRSAGVTL-YGGPRAS--K------L  585 (718)
T ss_pred             cEEEEecccccc------------------------c---------cHHHHHHHHHHCCCEE-ECCcccc--C------e
Confidence            999999999987                        1         2588999999999999 6775431  3      2


Q ss_pred             eccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         332 FANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       332 ~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +. + ++|.++.+|+|||++.+.+|++++|+|+++|+++|||+++|||+|.+++.++++++++|.|+||++.
T Consensus       586 l~-~-~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~IN~~~  655 (718)
T PLN02418        586 LN-I-PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVFHNAST  655 (718)
T ss_pred             eC-C-CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEEEeCCC
Confidence            33 3 6789999999999999999999999999999999999999999999999999999999999999875

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=100.00  E-value=1e-55  Score=482.30  Aligned_cols=371  Identities=20%  Similarity=0.264  Sum_probs=304.3

Q ss_pred             CCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccc
Q psy5844          28 PITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVG  107 (442)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  107 (442)
                      ..++.++++.......+.++.+++++++|+|||+.++...+...+++.+.++.. .++..+. ...+.+...+.+++|+|
T Consensus        33 ~~~R~~il~~~a~~l~~~~~~la~~~~~EtGk~~~e~~~~~~~~~~~~~~~~~~-~~~~~g~-~~~~~~~~~~~~~~P~G  110 (862)
T PRK13805         33 QEQVDKIVRAAALAALDARIPLAKMAVEETGRGVVEDKVIKNHFASEYIYNSYK-DEKTVGV-IEEDDEFGIIEIAEPVG  110 (862)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCChHHHHHHHHHHHHHHHHHHhc-CCCcccc-cCcCCCCCeEEEeecce
Confidence            345666666665655566788899999999999999875344444454444432 1122222 11113445688999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCCc-cchhhhhcCC
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGYG-DAGAALVQHP  182 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~~-~~~~~l~~~~  182 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.    ++|+|+|++|++++.+ +.++.|+.||
T Consensus       111 Vv~~I~pwn~P~~~~~~~~~~ALaaGN~vVlKps~~a~~t~~~~~~l~~~~l~~aG~p~g~v~vv~g~~~~~~~~L~~~~  190 (862)
T PRK13805        111 VIAGITPTTNPTSTAIFKALIALKTRNPIIFSFHPRAQKSSIAAAKIVLDAAVAAGAPKDIIQWIEEPSVELTNALMNHP  190 (862)
T ss_pred             EEEEEeCCCChhHHHHHHHHHHHHhCCcEEEECCcchHHHHHHHHHHHHHHHHHcCcCcccEEEecCCCHHHHHHHHcCC
Confidence            9999999999999999999999999999999999999999999888875    5799999999999866 8899999999


Q ss_pred             CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         183 GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       183 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      ++|.|+||||+.+++.    ++ .+++|+++|+|||+|+||++|||++.|++.|++++|.|+||.|++++|||||++++|
T Consensus       191 ~vd~I~fTGs~~v~~~----a~-~~~~pv~~e~gGk~p~iV~~dADl~~Aa~~i~~~k~~n~GQ~C~a~~~v~V~~~i~d  265 (862)
T PRK13805        191 GIALILATGGPGMVKA----AY-SSGKPALGVGAGNVPAYIDKTADIKRAVNDILLSKTFDNGMICASEQAVIVDDEIYD  265 (862)
T ss_pred             CccEEEecCCHHHHHH----HH-hcCCCeEEECCCCCeEEEeCCCCHHHHHHHHHHhhhccCCCccCCCceEEEehhhHH
Confidence            9999999999997643    33 478999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEE-EeCCccc---CCCCcccccce------e
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQL-VAGGGRA---GDKGFYVQPTV------F  332 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~-~~gg~~~---~~~g~~v~pti------~  332 (442)
                      +|+++|+++.               +|+++..+++++.++++++...|... +.||...   ...|++++|++      +
T Consensus       266 ~f~~~l~~~g---------------~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~~~~~i~~l  330 (862)
T PRK13805        266 EVKEEFASHG---------------AYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPEDTKILIAEV  330 (862)
T ss_pred             HHHHHHHHhC---------------CeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCCCeEEEEec
Confidence            9999988762               58999999999999999886655432 4455321   12478899997      6


Q ss_pred             ccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhc----CCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH-HH
Q psy5844         333 ANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANN----SDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE-VI  407 (442)
Q Consensus       333 ~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~----~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~-av  407 (442)
                      .++.+++.+.+ |.||||+++..|++++|+|+++|+    .++|++++|||+|.+.+.++++++++|.|++|.+... .+
T Consensus       331 ~~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~vN~~~~~~~~  409 (862)
T PRK13805        331 KGVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRILVNTPSSQGGI  409 (862)
T ss_pred             CCCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEEEEeCCcccccc
Confidence            67888888665 899999999999999999999987    5899999999999999999999999999999987532 11


Q ss_pred             -----HhhccCCccceeEE
Q psy5844         408 -----ERANNSDYGLAAAV  421 (442)
Q Consensus       408 -----~~an~~~yGl~~~v  421 (442)
                           ....+.+||.+.+.
T Consensus       410 ~~~~~~~~~~~~fG~G~~g  428 (862)
T PRK13805        410 GDLYNKLAPSLTLGCGSWG  428 (862)
T ss_pred             ccccCCcCccccccccCCC
Confidence                 24455667754443

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=100.00  E-value=1.1e-54  Score=437.50  Aligned_cols=324  Identities=18%  Similarity=0.194  Sum_probs=281.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhc----------hhHHHHHHHHHHHHHHhHhhhcCcccccCCCcce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSY----------SVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFA   99 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~----------~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (442)
                      ++..+++.......++++.+++++++|+|||+.+..          ..|+..+++.+++++....+..+...+  .+...
T Consensus        17 ~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~~~~~~~~~~~~~~~ev~~~~~~~~~~a~~~~~~~~~~~~--~~~~~   94 (397)
T cd07077          17 QRDLIINAIANALYDTRQRLASEAVSERGAYIRSLIANWIAMMGCSESKLYKNIDTERGITASVGHIQDVLLP--DNGET   94 (397)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccHHHHHHhCCcHHHHHHHHHHHHHHHHhcCcccceEec--CCCce
Confidence            455666666666667788999999999999975543          128889999999988765444443222  23457


Q ss_pred             EEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHh---CCCCCcEEeecCCc-cch
Q psy5844         100 YTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA---GIPEGVVNIVPGYG-DAG  175 (442)
Q Consensus       100 ~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~a---glp~~~~~~v~~~~-~~~  175 (442)
                      +++++|+|||++|+|||||+. .++++++||++||+||+|||+.+|.++..+.+++.++   |+|+++++++++.+ +.+
T Consensus        95 ~~~~~P~Gvv~~i~p~N~P~~-~~~~~~~aL~aGN~vilKps~~~p~~~~~l~~~~~~~~~~g~p~~~v~~v~~~~~~~~  173 (397)
T cd07077          95 YVRAFPIGVTMHILPSTNPLS-GITSALRGIATRNQCIFRPHPSAPFTNRALALLFQAADAAHGPKILVLYVPHPSDELA  173 (397)
T ss_pred             EEEEecceEEEEEeCCCCchH-HHHHHHHHHHcCCcEEEEcCcchhhHHHHHHHHHHHHhhcCCCCceEEEecCCCHHHH
Confidence            899999999999999999999 9999999999999999999999999999999999987   99999999999866 888


Q ss_pred             hhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEE
Q psy5844         176 AALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTF  255 (442)
Q Consensus       176 ~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~  255 (442)
                      ..|+.||++|.|+||||+.+++.+.+.++   .+|+++|+||++++||++|||++.|++.+++++|.| ||.|+++++||
T Consensus       174 ~~l~~~~~vd~v~ftGs~~~~~~v~~~~~---~~~~~~~~gg~~~~iv~~dad~~~a~~~~~~~~~~~-GQ~C~a~~~v~  249 (397)
T cd07077         174 EELLSHPKIDLIVATGGRDAVDAAVKHSP---HIPVIGFGAGNSPVVVDETADEERASGSVHDSKFFD-QNACASEQNLY  249 (397)
T ss_pred             HHHHcCCCCCEEEecCCHHHHHHHHHcCC---CCceEEecCCcceEEEcCCCCHHHHHHHHHHhhccC-CccCCCCeEEE
Confidence            99999999999999999999999988653   589999999999999999999999999999999999 99999999999


Q ss_pred             EcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccC
Q psy5844         256 VQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANV  335 (442)
Q Consensus       256 V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~  335 (442)
                      ||++++|+|+++|.+++..                                  .|+++..||.     ++|+.|+     
T Consensus       250 V~~~i~d~~~~~l~~~~~~----------------------------------~G~~~~~g~~-----~~~~~pt-----  285 (397)
T cd07077         250 VVDDVLDPLYEEFKLKLVV----------------------------------EGLKVPQETK-----PLSKETT-----  285 (397)
T ss_pred             EehhhhHHHHHHHHHHHHh----------------------------------cCcCcCCCce-----eeEEecc-----
Confidence            9999999999999988864                                  4666666552     3567776     


Q ss_pred             cchhHHHHHhhcCCcccccccCCHH----HHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         336 RDDMKIAREEIFGPVQQLIRFSSIE----EVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       336 ~~~~~~~~~e~fgPvl~v~~~~~~~----eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                       +++....+|+||||+.+++|++++    ++++++|+.++||+.+|||+|.+++.++++++++|.|++|+...+
T Consensus       286 -~~~~~~~~E~FgPvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~vN~~~~~  358 (397)
T cd07077         286 -PSFDDEALESMTPLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFYPNESSKK  358 (397)
T ss_pred             -CCCChhhhhhhCceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEEEeCCccC
Confidence             567777899999999999999996    555677999999999999999999999999999999999988754

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>KOG2453|consensus

Probab=100.00  E-value=1.2e-54  Score=398.34  Aligned_cols=355  Identities=29%  Similarity=0.492  Sum_probs=330.1

Q ss_pred             HHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccceEEEecccccchHHHHhhhh
Q psy5844          49 QSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIA  127 (442)
Q Consensus        49 ~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~  127 (442)
                      ..+++++|+||...|..+ ||++.++.|+|...+.+.+.|..+|.. ++......|.|+|+|.+|+.+|||....-|.-.
T Consensus        97 lg~lvslemgkilaegvg-evqeyvdicdyavglsr~l~g~i~pserpghalleqwnplg~vgvitafnfpcavygwnna  175 (507)
T KOG2453|consen   97 LGKLVSLEMGKILAEGVG-EVQEYVDICDYAVGLSRSLEGKIFPSERPGHALLEQWNPLGVVGVITAFNFPCAVYGWNNA  175 (507)
T ss_pred             HhhhhhhhhhhHhhhcch-hHHHHHHHHHHhhhhhhhhCCcccCCCCCchhHHHhcCCcceEEEEEeccCCceeeccCch
Confidence            388999999999999999 999999999999998888888877766 677778899999999999999999999999999


Q ss_pred             hhhccCCeEEecCCCCChHHHHHHHHH----HHHhCCCCCcEEeecCCccchhhhhcCCCccEEeecCCHHHHHHHHhhc
Q psy5844         128 PALATGNTIVLKPAEQTPLTALAVGAL----IAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGS  203 (442)
Q Consensus       128 ~aL~~Gn~vv~kps~~~~~~~~~l~~~----l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~  203 (442)
                      .++.+||+|+|||.+.+|+++...-++    |.+--+|.+..+..+|..+.++++..+.++..+.||||.+.++.+.+..
T Consensus       176 iaMv~gncVvWKpApttpLtTiAvtklIaevL~qnnl~~aicsltcG~aDigrAaakdgRvnlvsftGssQvgKsvgq~v  255 (507)
T KOG2453|consen  176 IAMVCGNCVVWKPAPTTPLTTIAVTKLIAEVLEQNNLPGAICSLTCGGADIGRAAAKDGRVNLVSFTGSSQVGKSVGQQV  255 (507)
T ss_pred             hhhhhcceeEecCCCCcceeHHHHHHHHHHHHhccCCCcceeeecccchhhhhhccccCceeecccccchhhhhHHHHHH
Confidence            999999999999999999977665544    5555889999999998779999999999999999999999999998877


Q ss_pred             cCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCC
Q psy5844         204 GASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDL  283 (442)
Q Consensus       204 ~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~  283 (442)
                      . .+..+..+|+||+|+.||.+|||+..++...++++...+||+|+..+|+++|+++||+.+++|+...+++++|.|+|+
T Consensus       256 q-arfgk~llelggnnaiiv~edadl~lvvps~lfaavgtagqrctt~rrl~~hesvyd~vlerlkkayaq~~ignpld~  334 (507)
T KOG2453|consen  256 Q-ARFGKLLLELGGNNAIIVNEDADLNLVVPSTLFAAVGTAGQRCTTTRRLIVHESVYDQVLERLKKAYAQFEIGNPLDS  334 (507)
T ss_pred             H-HHhhhHHHhhcCCceEEEeccccceeeehHHHHHHhcccccchhhhhHHHhhHHHHHHHHHHHHHHHHheecCCcCCC
Confidence            6 467789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHH
Q psy5844         284 NVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVI  363 (442)
Q Consensus       284 ~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai  363 (442)
                      .+-+|||.++++..+.+..+++++..|+++.+||+..+.+|+||.|||++ +..+..+..+|.|.||+.+.+|++++|++
T Consensus       335 ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfveptivt-l~hda~vv~~etfapilyvlkf~~~eea~  413 (507)
T KOG2453|consen  335 NTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTIVT-LKHDAPVVLRETFAPILYVLKFSTLEEAI  413 (507)
T ss_pred             CceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceEEE-ecCCcchhhhhhccceeeEEeccchhhhh
Confidence            99999999999999999999999999999999999988999999999997 88889999999999999999999999999


Q ss_pred             HHHhcCCCCceEEEecCCCChhhhhcc--ccEeeeEEeeCCHHHH
Q psy5844         364 ERANNSDYGLAAAVFTKDLDKTNYVTQ--GLRAGTLIRFSSIEEV  406 (442)
Q Consensus       364 ~~an~~~~gl~~~v~s~d~~~~~~~~~--~~~~G~V~vN~~~~~a  406 (442)
                      .+-|+.+.||++++||.|.+++.+++.  ..++|.|++|-+...|
T Consensus       414 ainnev~qglsssift~n~~nifrw~gpkgsdcgivnvniptsga  458 (507)
T KOG2453|consen  414 AINNEVDQGLSSSIFTTNIQNIFRWMGPKGSDCGIVNVNIPTSGA  458 (507)
T ss_pred             eeccccccccchhhhhcCHHHHHhhhCCCCCccceEEecCCCCch
Confidence            999999999999999999999988865  4579999999887654

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=100.00  E-value=3.2e-52  Score=416.67  Aligned_cols=314  Identities=54%  Similarity=0.842  Sum_probs=284.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc-cCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gv  108 (442)
                      ++..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++..+++..+.... ...+...+.+++|+||
T Consensus        17 ~R~~~l~~l~~~l~~~~~~l~~~~~~e~Gk~~~~~~~-ev~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~Gv   95 (367)
T cd06534          17 ERAAILRKIADLLEERREELAALETLETGKPIEEALG-EVARAIDTFRYAAGLADKLGGPELPSPDPGGEAYVRREPLGV   95 (367)
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccCCCceeEEEEEeeeE
Confidence            3445555555555556788899999999999999998 9999999999999888766542222 2256778999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||+|+...++.+++||++||+||+|||+.+|.++..+.++|.++|+|+++++++++++ +..+.|+.|++++.|
T Consensus        96 v~~i~p~n~p~~~~~~~~~~aL~~GN~vilk~s~~~~~~~~~l~~~l~~ag~p~~~v~~~~~~~~~~~~~l~~~~~vd~v  175 (367)
T cd06534          96 VGVITPWNFPLLLAAWKLAPALAAGNTVVLKPSELTPLTALALAELLQEAGLPPGVVNVVPGGGDEVGAALLSHPRVDKI  175 (367)
T ss_pred             EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHhcCCCcCeEEEEEcCchhHHHHHhcCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999977 688999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+++++.+.+.++ .+++|+++|+||+|++||++|+|++.|++.+++++|.++||.|+++++||||++++++|+++
T Consensus       176 ~~tGs~~~~~~v~~~~~-~~~~~~~~e~~g~~~~iV~~~ad~~~aa~~i~~~~~~~~gq~C~s~~~v~v~~~~~~~f~~~  254 (367)
T cd06534         176 SFTGSTAVGKAIMKAAA-ENLKPVTLELGGKSPVIVDEDADLDAAVEGAVFGAFFNAGQICTAASRLLVHESIYDEFVEK  254 (367)
T ss_pred             EEECCHHHHHHHHHHHh-cCCCeEEEEcCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEcHHHHHHHHHh
Confidence            99999999999999988 57899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      |+                                                            |++....+++.++.+|+|
T Consensus       255 l~------------------------------------------------------------tl~~~~~~~~~~~~~E~f  274 (367)
T cd06534         255 LV------------------------------------------------------------TVLVDVDPDMPIAQEEIF  274 (367)
T ss_pred             hc------------------------------------------------------------eeeeCCCCCCccccCCcc
Confidence            87                                                            444455556677889999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      ||+++++.|++++|+++++|+.+++++++|||+|...+.++.+++++|.|++|+....
T Consensus       275 gPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~iN~~~~~  332 (367)
T cd06534         275 GPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVYINDSSIG  332 (367)
T ss_pred             CceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEEECCCCCC
Confidence            9999999999999999999999999999999999999999999999999999987754

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>KOG2452|consensus

Probab=100.00  E-value=1.4e-51  Score=393.05  Aligned_cols=362  Identities=44%  Similarity=0.784  Sum_probs=325.7

Q ss_pred             ccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC----CCcceEEEeeccceEEEecccccch
Q psy5844          44 EFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN----GDFFAYTRHEPVGVCGQIIPWNFPL  119 (442)
Q Consensus        44 ~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P~  119 (442)
                      ++++..+.+.+++.|.-..-+...-+..+|+.+||++.|.+++.|..+|..    ......+.++|+||+++|.|||||+
T Consensus       498 ~h~eelat~e~ldagavytlalkthvgmsi~~~ryfagwcdkiqg~tipi~~arpn~nl~lt~~epigv~g~i~pwnypl  577 (881)
T KOG2452|consen  498 QHQEELATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGSTIPINQARPNRNLTLTRKEPVGVCGIIIPWNYPL  577 (881)
T ss_pred             hccchhhhhhhccccceeeeeehhhcCceehHHHHhhhhhhhccCceeccccCCCCCcceeeecCcceeEEEeccCCchH
Confidence            444445888899999988888877889999999999999999999877764    3456789999999999999999999


Q ss_pred             HHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEeecCCHHHHHH
Q psy5844         120 LMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKL  198 (442)
Q Consensus       120 ~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~  198 (442)
                      ..+.|+.+.+|++-                 ..++..    -.|++|+++|++ -+++.|..||+++.|-||||+.+|..
T Consensus       578 mmlswk~aaclaa~-----------------~~k~~e----~sgvini~~gsgslvg~rls~hpdvrkigftgsteig~~  636 (881)
T KOG2452|consen  578 MMLSWKTAACLAAQ-----------------VLKFAE----LTGVVNVLPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKH  636 (881)
T ss_pred             HHHHHHHHHHHHHH-----------------Hhhhhh----hcceEEEecCCcchhccccccCCccceeccccchHHHHH
Confidence            99999998887432                 112222    248999999998 78999999999999999999999999


Q ss_pred             HHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHHHHHhhcccC
Q psy5844         199 VQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVG  278 (442)
Q Consensus       199 i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g  278 (442)
                      |+..|+..+.|++.+|+||++|+|++.|+|+++|++....+.|++-|..|++..|++|.+++.|+|+.++.+..+++++|
T Consensus       637 im~sca~snikkvslelgg~sp~iifad~dl~kav~~~~~~vff~kgenciaagr~fi~~sihd~fv~~~vee~~~~~ig  716 (881)
T KOG2452|consen  637 IMKSCAISNVKKVSLELGGESPFIIFADCDLNKAVQMGMSSVFFSKGENCIAAGRLFVEDSIHDEFVRRVVEEVRKMKVG  716 (881)
T ss_pred             HHHHHhhcchheeeeeccCCCceEEEecCcHHHHHHhhccceeecCCcchhhhcceeehhhhhHHHHHHHHHHHHhhccC
Confidence            99999988999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCC
Q psy5844         279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSS  358 (442)
Q Consensus       279 ~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~  358 (442)
                      +|+|.+|+-||--...+..++.+|++.++..|+++.+||.+.+..|+|++|||+.++...|.+..||.||||.-+..|++
T Consensus       717 ~pldr~t~hgpqnh~ahl~kl~ey~~~~v~~ga~~~~gg~~~~r~g~~f~pti~s~i~d~~f~a~eesfgpim~is~f~d  796 (881)
T KOG2452|consen  717 NPLDRDTDHGPQNHHAHLVKLMEYCQHGVKEGATLVCGGNQVPRPGFFFEPTVFTDVEDHMFIAKEESFGPVMIISRFAD  796 (881)
T ss_pred             CcccccccCCchhHHHHHHHHHHHHHHHhccCcEEEECCccCCCCCcccCCeeecccchhhhhhhccccCceEEEEecCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999988875


Q ss_pred             --HHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHHHHhhccCCccceeEEeccChhHH
Q psy5844         359 --IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKT  429 (442)
Q Consensus       359 --~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~av~~an~~~yGl~~~vft~d~~~~  429 (442)
                        ++..++.+|++.+|+++++||+|.....+++..+.+|+|++|+.-..-++   ...-|+.-+-|++|....
T Consensus       797 ~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvfvnty~ktdva---apfggfkqsgfgkd~ge~  866 (881)
T KOG2452|consen  797 GDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFVNTYNKTDVA---APFGGFKQSGFGKDLGEA  866 (881)
T ss_pred             CCHHHHHhhccccccccccceeecccchhhhhhhhhccceEEEeeccccccc---cCCCCccccccccchhHH
Confidence              79999999999999999999999999999999999999999986543332   234456777788887654

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=100.00  E-value=5.1e-51  Score=434.45  Aligned_cols=303  Identities=16%  Similarity=0.178  Sum_probs=255.6

Q ss_pred             HHHHHHHcCCChhhhchh---------------HHHHHHHHHHHHHHhHhhhcCccccc---CCCcceEEEeeccceEEE
Q psy5844          50 SSLETLDNGKPYNMSYSV---------------DVEYSLRTLRYYAGFADKIHGKTIPI---NGDFFAYTRHEPVGVCGQ  111 (442)
Q Consensus        50 ~~~~~~e~Gk~~~~a~~~---------------ev~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~P~Gvv~~  111 (442)
                      .+.+..++||++.+++..               |+..+++.+++++.. .+..+...+.   ..+...+.+++|+|||++
T Consensus       325 ~eei~~e~gkdl~~a~~~~~~~~~~~el~~~~~ei~~~~~~l~~~a~~-~~~~g~~~~~~~~~~~~~~~~~~~P~GVV~~  403 (715)
T TIGR01092       325 EDEILAENKKDVAAAQGAGYAASLVARLSMSPSKISSLAISLRQLAAM-EDPIGRVLKRTRIADNLILEKTSVPIGVLLI  403 (715)
T ss_pred             HHHHHHHHhhhHHHHHhcCcchhHHHHHhCCHHHHHHHHHHHHHHhcC-CCcccccccccccCCCceeEEEEeeceEEEE
Confidence            344568999999987651               377888888888863 2322332221   123345789999999999


Q ss_pred             ecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCC----cEEeecCCccchhhhhcCCCccEE
Q psy5844         112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEG----VVNIVPGYGDAGAALVQHPGVDKV  187 (442)
Q Consensus       112 i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~----~~~~v~~~~~~~~~l~~~~~v~~v  187 (442)
                      |+||| |+.. ++++++||++||+||+|||+.+|.++..+++++.++ +|+|    +++++++..+.++.|..||.+|.|
T Consensus       404 I~PwN-P~~~-~~~~~~ALaaGN~vvlKpse~tp~t~~~l~~l~~~a-lp~g~~~~~~~~v~~~~~~~~~l~~~~~vd~I  480 (715)
T TIGR01092       404 VFESR-PDAL-VQIASLAIRSGNGLLLKGGKEAARSNAILHKVITEA-IPIHVGKKLIGLVTSREEIPDLLKLDDVIDLV  480 (715)
T ss_pred             EeCCC-hHHH-HHHHHHHHHhCCEEEEcCcccchHHHHHHHHHHHHH-cCCCCCCcEEEEeCChHHHHHHHhcCCCccEE
Confidence            99999 9998 589999999999999999999999999999999999 9987    689998533778889999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      +||||+.+|+.|++.++    +|+++|+|||||+||++|||++.|++.+..+.|.+ ||.|++++|||||++++|+    
T Consensus       481 ~fTGS~~vG~~i~~~A~----~pv~lElgGk~p~iV~~dADl~~A~~~i~~~~~~~-GQ~C~a~~rvlV~~~i~d~----  551 (715)
T TIGR01092       481 IPRGSNKLVSQIKKSTK----IPVLGHADGICHVYVDKSASVDMAKRIVRDAKCDY-PAACNAMETLLVHKDLLRN----  551 (715)
T ss_pred             EEcCCHHHHHHHHHhCC----CCEEEEcCCcceEEECCCCCHHHHHHHHHHHhCCC-CCccccCcEEEEehhhccc----
Confidence            99999999999998753    89999999999999999999999987777776655 9999999999999999985    


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                                           |        .+.++++.+..+|++++ ||.+.+   .|+.  +   .++++.++.+|+|
T Consensus       552 ---------------------~--------~~~~~v~~~~~~Ga~l~-Gg~~~~---~~~~--~---~~~~~~i~~eE~F  593 (715)
T TIGR01092       552 ---------------------G--------LLDDLIDMLRTEGVTIH-GGPRFA---AYLT--F---NISETKSFRTEYS  593 (715)
T ss_pred             ---------------------h--------hHHHHHHHHHHCCCEEE-CCcchh---heec--c---CCCCchhhhcccc
Confidence                                 0        25677777788899984 775421   2332  1   2457899999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||++.
T Consensus       594 GPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~vN~~~  649 (715)
T TIGR01092       594 SLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVFHNAST  649 (715)
T ss_pred             CceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEeCCC
Confidence            99999999999999999999999999999999999999999999999999999874

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd07080 ALDH_Acyl-CoA-Red_LuxC Acyl-CoA reductase LuxC

Probab=99.98  E-value=3e-31  Score=268.24  Aligned_cols=322  Identities=18%  Similarity=0.202  Sum_probs=229.9

Q ss_pred             cccHHHHHHHHHcCCChhhhchhHHHHHHHHHH--HHHHhHhhhcCcccccC----CCcceEEEeeccceEEEecccccc
Q psy5844          45 FVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLR--YYAGFADKIHGKTIPIN----GDFFAYTRHEPVGVCGQIIPWNFP  118 (442)
Q Consensus        45 ~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~--~~~~~~~~~~~~~~~~~----~~~~~~~~~~P~Gvv~~i~p~n~P  118 (442)
                      |+....+.+...+|.+...... ++......++  .......+.++....++    .+...+++++|+|++++|+|||+|
T Consensus        47 ~r~~~l~~l~~~~~~~~~~~~~-a~~~l~~~~~r~~l~~~l~~el~~~~~Ld~w~~~~~~~~~~~~P~Gvv~~I~p~N~P  125 (422)
T cd07080          47 LRQQAERLLPTVTGYSEEMLRE-GLKRLMALFRRENLERILERELGSPGILDEWVPPGRGGYIRAQPRGLVVHIIAGNVP  125 (422)
T ss_pred             HHHHHHHhhhhccCCCHHHHHH-HHHHHHHHcCHHHHHHHHHHhcCCcccccCCccCCCCCeeEEcCCceEEEEccCCcc
Confidence            4444567777788888665555 5555555554  11122222223211121    245568899999999999999999


Q ss_pred             hHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCC----CcEEee--cCCc-cchhhhhcCCCccEEeecC
Q psy5844         119 LLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPE----GVVNIV--PGYG-DAGAALVQHPGVDKVAFTG  191 (442)
Q Consensus       119 ~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~----~~~~~v--~~~~-~~~~~l~~~~~v~~v~ftG  191 (442)
                      + ..++.+++||++||++|+|||+.+|.++..+.++|.++ +|+    +.++++  +|++ +.++.|+.++  |.|+|||
T Consensus       126 ~-l~~~s~~~aLlaGN~~ilKpS~~~p~~~~~l~~~l~~~-~p~~~~~~~~~vv~~~g~~~~~~~~l~~~~--D~i~~~G  201 (422)
T cd07080         126 L-LPVWSIVRGLLVKNVNLLKMSSSDPLTATALLRSLADV-DPNHPLTDSISVVYWPGGDAELEERILASA--DAVVAWG  201 (422)
T ss_pred             c-cHHHHHHHHHHhcCceEEECCCccchHHHHHHHHHHhc-CCCCcccceEEEEEecCCchHHHHHHHHhC--CEEEEeC
Confidence            9 79999999999999999999999999999999999999 787    888888  4545 5888898886  9999999


Q ss_pred             CHHHHHHHHhhccCCCCceeeeecCCCCc-eEEeCCC----CHHHHHHHHHHHhhccCCCcccCCCEEEEcCcc---HHH
Q psy5844         192 STEVGKLVQQGSGASNLKRTTLELGGKSP-NIIFADA----DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTI---YDE  263 (442)
Q Consensus       192 s~~~~~~i~~~~~~~~~~~~~~e~gG~~~-~iV~~da----d~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~---~~~  263 (442)
                      |+.+++.|++.++ .+  +.++|+|||++ +|+.+++    |++.+++.++++.+.|+||.|+|+++||||+++   +++
T Consensus       202 s~~~~~~i~~~a~-~~--~~~Le~Ggk~s~~vi~~~a~~~~dl~~aa~~~a~~~~~~~gQ~C~sp~~v~V~~~~~~~~~~  278 (422)
T cd07080         202 GEEAVKAIRSLLP-PG--CRLIDFGPKYSFAVIDREALESEKLAEVADALAEDICRYDQQACSSPQVVFVEKDDDEELRE  278 (422)
T ss_pred             CHHHHHHHHHhCC-CC--CeeeecCCceeEEEecHHhhccccHHHHHHHHHHHHHHHhhhhccCCeEEEEECCCCchHHH
Confidence            9999999999887 34  56999999955 5555568    999999999999999999999999999999999   999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHH
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |.++|.++++++.-..|...       .+.....++...-..+...+......    .+.+    -+|...-.....   
T Consensus       279 f~~~l~~~l~~~~~~~p~~~-------~~~~~~~~~~~~r~~~~~~~~~~~~~----~~~~----~~v~~~~~~~~~---  340 (422)
T cd07080         279 FAEALAAALERLPRRYPALS-------LSAAESAKIARARLEAEFYELKGGVS----RDLG----WTVIISDEIGLE---  340 (422)
T ss_pred             HHHHHHHHHHHHHHhCCCCC-------CCHHHHHHHHHHHHHHHHHHHhcCCC----CCCC----eEEEEeCCCCcc---
Confidence            99999999988764333222       24555555554433333322221110    1111    122221111111   


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEee
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG  395 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G  395 (442)
                      ...++-.+.+..++++++++..++.  +--+.+++..+.+. .++.+.+...
T Consensus       341 ~~~~~r~v~v~~v~~l~~~l~~~~~--~lQTvg~~~~~~~~-~~~~~~l~~~  389 (422)
T cd07080         341 ASPLNRTVNVKPVASLDDVLRPVTP--YLQTVGLAPSPAEL-AELADALAAA  389 (422)
T ss_pred             CCCCcCEEEEEEcchHHHHHHhhhh--hcceeEeecChhhH-HHHHHHHHHc
Confidence            1344556788889999999998875  55577888766554 6666666533

Acyl-CoA reductase, LuxC, (EC=1.2.1.50) is the fatty acid reductase enzyme responsible for synthesis of the aldehyde substrate for the luminescent reaction catalyzed by luciferase. The fatty acid reductase, a luminescence-specific, multienzyme complex (LuxCDE), reduces myristic acid to generate the long chain fatty aldehyde required for the luciferase-catalyzed reaction resulting in the emission of blue-green light. Mutational studies of conserved cysteines of LuxC revealed that the cysteine which aligns with the catalytic cysteine conserved throughout the ALDH superfamily is the LuxC acylation site. This CD is composed of mainly bacterial sequences but also includes a few archaeal sequences similar to the Methanospirillum hungateiacyl acyl-CoA reductase RfbN.

>COG0014 ProA Gamma-glutamyl phosphate reductase [Amino acid transport and metabolism]

Probab=99.95  E-value=9.6e-27  Score=222.00  Aligned_cols=304  Identities=19%  Similarity=0.244  Sum_probs=244.9

Q ss_pred             HHHHHHHHHHHHHhHhhhcCcccc---cCCCcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCCh
Q psy5844          69 VEYSLRTLRYYAGFADKIHGKTIP---INGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTP  145 (442)
Q Consensus        69 v~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~  145 (442)
                      ++..++.++..+.+.+++ |+.+.   .+.|...+..+.|+||+++|.- ..| +..+...+-||++||+||+|.+..+.
T Consensus        76 i~~ma~gl~~Va~L~DPv-Gev~~~~~~~nGL~i~~~rvPLGVigvIYE-sRP-nVtvdaaaLclKsGNAvILRGGsea~  152 (417)
T COG0014          76 IEAMADGLRQVAALPDPV-GEVIDGWTLPNGLQIYRVRVPLGVIGVIYE-SRP-NVTVDAAALCLKSGNAVILRGGSEAI  152 (417)
T ss_pred             HHHHHHHHHHHhcCCCch-HhhhccccCCCCCEEEEEEccceEEEEEEe-cCC-ccHHHHHHHHHhcCCEEEEeCcHHHh
Confidence            345555566666655555 44432   3378888999999999999964 334 56667778899999999999999999


Q ss_pred             HHHHHHHHHHH----HhCCCCCcEEeecCCc--cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCC
Q psy5844         146 LTALAVGALIA----EAGIPEGVVNIVPGYG--DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKS  219 (442)
Q Consensus       146 ~~~~~l~~~l~----~aglp~~~~~~v~~~~--~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~  219 (442)
                      .+...+.++++    ++|+|.+.+|+++...  ++.+.|..+..+|.|.-.||...-+.+.+.+    -.||+-.+-|++
T Consensus       153 ~Sn~ai~~~i~~aL~~~~lP~~aVqli~~~~R~~v~~ll~l~~yiD~iIPRGg~~Li~~v~~~a----~vPVi~~~~G~C  228 (417)
T COG0014         153 HSNAAIVEVIQEALEKAGLPADAVQLIEDTDREEVLELLRLDGYIDLVIPRGGAGLIRRVVENA----TVPVIEHGVGNC  228 (417)
T ss_pred             hhHHHHHHHHHHHHHHcCCCHHHhhhccCCCHHHHHHHHhhcCceeEEEcCCcHHHHHHHHhCC----cCCEEecCcceE
Confidence            98888877765    4599999999999854  6777777788899999999999999988854    479999999999


Q ss_pred             ceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHH
Q psy5844         220 PNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKI  299 (442)
Q Consensus       220 ~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~  299 (442)
                      .++|+.+||++.|.+-++.++....+ .|++.+.++||+.+.++|+..|.+.+...                        
T Consensus       229 Hiyvd~~ADld~A~~ii~nAKtqrPs-~CNA~EtLLVh~~ia~~fLp~l~~~l~~~------------------------  283 (417)
T COG0014         229 HIYVDESADLDKALKIIVNAKTQRPS-VCNAAETLLVHRAIAKSFLPKLANALQEA------------------------  283 (417)
T ss_pred             EEEecccCCHHHHHHHHHcccCCCCc-ccchHHHHHcCHHHHHHhHHHHHHHHHhc------------------------
Confidence            99999999999999999999999888 79999999999999999999998887632                        


Q ss_pred             HHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEec
Q psy5844         300 LEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFT  379 (442)
Q Consensus       300 ~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s  379 (442)
                                |-++......     .-+-|..-  .+....-+..|+..+++.+..++++++||+.+|..+.+++-+|.|
T Consensus       284 ----------gvelr~d~~~-----~~~~~~~~--~~A~e~Dw~tEyLd~ilavkvVd~ld~AI~HIn~y~S~HsdaIiT  346 (417)
T COG0014         284 ----------GVELRGDAEA-----LALLPDAV--KPATEEDWDTEYLDLILAVKVVDSLDEAIAHINTYGSGHSDAIIT  346 (417)
T ss_pred             ----------CeEEEcCHHH-----HHhccccC--CCCchhhHHHHhhhheeEEEEeCCHHHHHHHHHHhCCCCCcceee
Confidence                      3222211100     00001100  222334467899999999999999999999999999999999999


Q ss_pred             CCCChhhhhccccEeeeEEeeCCHHHHHHhhccCCccceeEE--eccC
Q psy5844         380 KDLDKTNYVTQGLRAGTLIRFSSIEEVIERANNSDYGLAAAV--FTKD  425 (442)
Q Consensus       380 ~d~~~~~~~~~~~~~G~V~vN~~~~~av~~an~~~yGl~~~v--ft~d  425 (442)
                      +|...+++|.+++++..||+|.++    ++.++..||+++=+  -|..
T Consensus       347 e~~~~a~~F~~~VDSAaVyvNAST----RFtDG~~fG~GaEiGISTqK  390 (417)
T COG0014         347 EDYANAERFVNEVDSAAVYVNAST----RFTDGGQFGLGAEIGISTQK  390 (417)
T ss_pred             CCHHHHHHHHhhcchheEEEeccc----ccccCccccCceEEEeecCc
Confidence            999999999999999999999999    68889999998864  5543

>KOG4165|consensus

Probab=99.82  E-value=3.8e-19  Score=164.44  Aligned_cols=273  Identities=18%  Similarity=0.154  Sum_probs=219.7

Q ss_pred             CCcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHh----CCCCCcEEeecC
Q psy5844          95 GDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVVNIVPG  170 (442)
Q Consensus        95 ~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~a----glp~~~~~~v~~  170 (442)
                      ++..-+..-.|+||.++|  |....-.+.....-|++.||.+++|-...+..+...+.++.+++    |.|.+.+++|..
T Consensus       101 dgL~L~qvt~PiGvLLVI--FESRPd~l~qiasLAi~SgN~llLKGGkEa~~Sn~~L~~~v~~al~~~~~~~~aV~LV~s  178 (433)
T KOG4165|consen  101 DGLELEQVTVPIGVLLVI--FESRPDCLPQIASLAIASGNGLLLKGGKEAAHSNAALHKLVQEALGTHGGPGKAVQLVTS  178 (433)
T ss_pred             CCceEEEeeccceEEEEE--eccCchHHHHHHHHHHhcCCeEeecCchhhhhhHHHHHHHHHHHhhhccCchhhhhheec
Confidence            666677888999999999  44343445555566999999999999988888888888887776    778999999998


Q ss_pred             CccchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccC
Q psy5844         171 YGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCA  250 (442)
Q Consensus       171 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s  250 (442)
                      ..++.+.|..+..+|+|+-.||..-.+.|...    +..||.....|.+.++|++|||+++|.+-+..+++-+.. .|++
T Consensus       179 REev~dLl~ld~~IDLvIPRGSs~LVr~Ik~~----tkIPVLGHA~GichvYvd~dad~~kA~riv~DaK~dYPA-aCNA  253 (433)
T KOG4165|consen  179 REEVSDLLKLDDYIDLVIPRGSSDLVRSIKDT----TKIPVLGHAEGICHVYVDKDADLDKAKRIVRDAKCDYPA-ACNA  253 (433)
T ss_pred             HHHHHHHhhhhhheeEEecCCcHHHHHHHhhc----ccCcccccccceeEEEeccccCHHHHHHHHhcccCCCch-hhhh
Confidence            77999999889999999999999999999874    448999999999999999999999998888888777665 7999


Q ss_pred             CCEEEEcCc-cHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCccccc
Q psy5844         251 GSRTFVQDT-IYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQP  329 (442)
Q Consensus       251 ~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~p  329 (442)
                      .+.+++|++ ....|++.|...+.                                  ..|.++.+|.. ...-..|-  
T Consensus       254 mETLLIh~dl~~~~~~~~l~~~l~----------------------------------~~gVtl~agpk-l~~~l~~~--  296 (433)
T KOG4165|consen  254 METLLIHKDLEQSPFFDDLINMLK----------------------------------EEGVTLHAGPK-LAALLKFS--  296 (433)
T ss_pred             HHHHhccHhhhhcchHHHHHHHHH----------------------------------hcCeEEecChh-HHhhcCcC--
Confidence            999999998 34566666655443                                  23444443322 11111111  


Q ss_pred             ceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHHHHh
Q psy5844         330 TVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIER  409 (442)
Q Consensus       330 ti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~av~~  409 (442)
                            +++..-+..|+-.-.+++..+++.++||+.++..+..++-+|.|+|...++.|++.+++..|+.|.+.    ++
T Consensus       297 ------p~e~~s~~~Ey~~l~~~ievV~~v~~Ai~HI~~hgS~HTD~IvTe~~~~Ae~Fl~~VDSa~vf~NAST----RF  366 (433)
T KOG4165|consen  297 ------PPEAKSFNTEYGSLECTIEVVDSVQSAIDHIHTHGSSHTDCIVTENEATAEHFLKHVDSACVFHNAST----RF  366 (433)
T ss_pred             ------CchhhhhhhhhcchheeeeecccHHHHHHHHHhcCCcccceEEecCHHHHHHHHhccchhheeecccc----cc
Confidence                  22233345676677788999999999999999999999999999999999999999999999999998    78


Q ss_pred             hccCCccceeEE
Q psy5844         410 ANNSDYGLAAAV  421 (442)
Q Consensus       410 an~~~yGl~~~v  421 (442)
                      +++.+|||++-|
T Consensus       367 aDGfRfGlGaEV  378 (433)
T KOG4165|consen  367 ADGFRFGLGAEV  378 (433)
T ss_pred             ccccccccccee
Confidence            999999999865

>PF05893 LuxC: Acyl-CoA reductase (LuxC); InterPro: IPR008670 This family consists of several bacterial Acyl-CoA reductase (LuxC) proteins

Probab=99.66  E-value=2.9e-14  Score=142.84  Aligned_cols=316  Identities=19%  Similarity=0.159  Sum_probs=204.0

Q ss_pred             HHHHHHHcCCChhhhchhHHHHHHHHHHH--HHHhHhhhcCcccccC---CCcceEEEeeccceEEEecccccchHHHHh
Q psy5844          50 SSLETLDNGKPYNMSYSVDVEYSLRTLRY--YAGFADKIHGKTIPIN---GDFFAYTRHEPVGVCGQIIPWNFPLLMLAW  124 (442)
Q Consensus        50 ~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~--~~~~~~~~~~~~~~~~---~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~  124 (442)
                      .+.+..-+|.+....+.  +......++.  .....+..++.+..++   .....+.++.|+|++++|.|.|-|... ++
T Consensus        29 ~~~l~~~~g~~~~~~~~--l~~~~~~~~r~~L~~~l~~el~~~~~Ld~~~~~~~~~~~~~p~g~v~Hi~agNvp~~~-~~  105 (399)
T PF05893_consen   29 IELLPKITGYSPEMVEY--LEALMRWFRRENLERKLERELGNPESLDGWVPRGDGYVRAFPRGLVFHIAAGNVPLVG-FY  105 (399)
T ss_pred             HHhhhhhcCCCHHHHHH--HHHHHHhcCHHHHHHHHHHhcCCHhHhhcccccccchhhccCCceEEEEcCCCccchH-HH
Confidence            55556667776644431  2223333321  1112222234332222   223367889999999999999999754 45


Q ss_pred             hhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCC----CcEEeecC--Cc-cchhhhhcCCCccEEeecCCHHHHH
Q psy5844         125 KIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPE----GVVNIVPG--YG-DAGAALVQHPGVDKVAFTGSTEVGK  197 (442)
Q Consensus       125 ~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~----~~~~~v~~--~~-~~~~~l~~~~~v~~v~ftGs~~~~~  197 (442)
                      .++.+|.+||..|+|+|...+.++..|.+.|.+. .|.    ..+.+++.  .. ++.+.+..  ..|.++.+||.++.+
T Consensus       106 S~~~~lL~gn~nivK~ss~d~~~~~~l~~~l~~~-~~~~~l~~~i~v~~~~~~d~~~~~~~~~--~~D~vv~wGgd~ti~  182 (399)
T PF05893_consen  106 SLVRGLLSGNANIVKLSSRDPFLAPALLRSLAEI-DPEHPLADSIAVVYWPGGDEELEEALSQ--QADAVVAWGGDETIR  182 (399)
T ss_pred             HHHHHHHhCCceEEECCCCchhHHHHHHHHHHhh-CccchhhhcEEEEEecCCchHHHHHHHH--HCCEEEEeCCHHHHH
Confidence            5667888999999999999999999999999886 553    45666633  23 56666664  589999999999999


Q ss_pred             HHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEc---CccHHHHHHHHHHHHhh
Q psy5844         198 LVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQ---DTIYDEFVARSGERAKR  274 (442)
Q Consensus       198 ~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~---~~~~~~f~~~l~~~~~~  274 (442)
                      .+.+.++  ..++.+....-.+-.++..+++++.+++.+..-.+...+|.|.|++.|||.   ..-.++|.++|.+.+++
T Consensus       183 ~ir~~~~--~~~~~i~fg~k~S~avi~~~~~~~~~a~~~a~Di~~~dQ~aCsSp~~ifv~~g~~~~~~~f~~~L~~~L~~  260 (399)
T PF05893_consen  183 AIRQPLP--PGARLIEFGPKYSFAVIDAEAELEEAARRLANDIFLFDQQACSSPQVIFVETGDGDSVEEFAERLAEALER  260 (399)
T ss_pred             HHHHHcC--CCCcEeeeCCceEEEEEcCchhHHHHHHHHHHHHHHhhCcccCCCeEEEEECCCcccHHHHHHHHHHHHHH
Confidence            9999544  556666666667777888888999999999999999999999999999999   33457888888777765


Q ss_pred             cccCCCCCCCCccCcCCCHHHHHHHHHHHH-----HHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCC
Q psy5844         275 RTVGDPFDLNVEQGPQIDKEQMDKILEFIE-----SGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP  349 (442)
Q Consensus       275 ~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~-----~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgP  349 (442)
                      ..---|...       .+......+....+     .+...+.++..+...        ..+|+..-..   ......++-
T Consensus       261 ~~~~~p~~~-------~s~~~~~~~~~~r~~~~~~~~~~~~~~~~~~~~~--------~~~V~~~~~~---~~~~~pl~r  322 (399)
T PF05893_consen  261 AAERYPRGE-------LSIDEAAAISSLRAEAELRYALDGEYRVWSSDDN--------SWTVIVSPEP---PLLPSPLNR  322 (399)
T ss_pred             HHHhCCCcC-------CCHHHHHHHHHHHHHHHHHHHhcCCcceeecCCC--------CEEEEECCCc---ccccCCCCC
Confidence            432112111       23333333333322     233434344422211        1233322111   111233355


Q ss_pred             cccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhcccc
Q psy5844         350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL  392 (442)
Q Consensus       350 vl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~  392 (442)
                      .+.+..++++++++..++....--+.+++. +..+...+.+.+
T Consensus       323 ~v~v~~v~~~~e~~~~l~~~~~lQTvgi~~-~~~~~~~~~~~l  364 (399)
T PF05893_consen  323 TVYVVPVDSLEELVPYLRPKRGLQTVGIYP-WSERLEELARAL  364 (399)
T ss_pred             EEEEEEcCCHHHHHHHhhhcCCCeeEEEec-ChhhHHHHHHHH
Confidence            788999999999999998763323566665 344555555533

The channelling of fatty acids into the fatty aldehyde substrate for the bacterial bioluminescence reaction is catalysed by a fatty acid reductase multienzyme complex, which channels fatty acids through the thioesterase (LuxD), synthetase (LuxE) and reductase (LuxC) components [].; GO: 0003995 acyl-CoA dehydrogenase activity, 0008218 bioluminescence, 0055114 oxidation-reduction process

>KOG2450|consensus

Probab=99.37  E-value=4.9e-13  Score=132.16  Aligned_cols=127  Identities=35%  Similarity=0.576  Sum_probs=107.9

Q ss_pred             CCEEEeCCcccCCCCcccccceeccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhc---------
Q psy5844         310 GAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANN---------  368 (442)
Q Consensus       310 Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~---------  368 (442)
                      -+++++.+.     +.||+..|+++|........++            ..||++.-.+++.+...|+.+..         
T Consensus       298 qGq~C~a~s-----R~~Vqe~iydefv~~~v~~a~~~~kvGdP~~~~~~qG~~i~~~q~ekI~~yi~~~k~eGa~l~~gG  372 (501)
T KOG2450|consen  298 QGQCCTAGS-----RVFVQESIYDEFVEKFVAAAKKKLKVGDPFDEGTEQGPQISKTQYEKILGYIESGKKEGATLLCGG  372 (501)
T ss_pred             cccccccCc-----eeEEechHHHHHHHHHHHHHhcccccCCCCCcccccccccCHHHHHHHHHHHHHHHhcCCEEEecC
Confidence            335555554     4699999999998877665533            25899999999998888887732         


Q ss_pred             -----CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccc
Q psy5844         369 -----SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT  440 (442)
Q Consensus       369 -----~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~  440 (442)
                           .+|.+.++||+ |....+++++++.||+|   ..+++.+|++++||++.|||+++|||+|++++++++.++++|+
T Consensus       373 ~~~g~~Gyfi~Ptv~~-~v~~~m~i~~EEIFGPVv~v~~F~t~eE~i~~AN~t~yGLAa~V~t~dl~~a~~va~~l~aGt  451 (501)
T KOG2450|consen  373 VRLGDKGYFIKPTVFT-NVTDDMRIAKEEIFGPVVVVLKFKTEEEVIERANNTTYGLAAGVFTKDLDKAHRVANALQAGT  451 (501)
T ss_pred             cccCCCceEECCeecc-CCChhhhhhHhhccCceEEEEecCcHHHHHHHhcCCcccceeeEeccChHHHHHHHHHhcCce
Confidence                 35677899999 89999999999999976   5588999999999999999999999999999999999999999


Q ss_pred             cC
Q psy5844         441 VW  442 (442)
Q Consensus       441 v~  442 (442)
                      ||
T Consensus       452 Vw  453 (501)
T KOG2450|consen  452 VW  453 (501)
T ss_pred             EE
Confidence            97

>KOG2451|consensus

Probab=99.26  E-value=6.7e-12  Score=119.14  Aligned_cols=123  Identities=24%  Similarity=0.360  Sum_probs=105.3

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc---------------CCCC
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN---------------SDYG  372 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~---------------~~~g  372 (442)
                      +...+..|||..|++.|...+....+++           .||++.-..++..+..++.+.+               .++.
T Consensus       305 CVcaNR~yVh~~iyD~Fv~~l~e~vkkl~vGdG~~~~tt~GpLIne~av~Kve~~v~DAvsKga~ii~GGk~~~~lg~~f  384 (503)
T KOG2451|consen  305 CVCANRVYVHDSIYDKFVSKLAEAVKKLKVGDGLDPGTTQGPLINEKAVEKVEKHVEDAVSKGAKIILGGKERSELGPTF  384 (503)
T ss_pred             eEecceeEEehhhHHHHHHHHHHHHHheeccCCCCCCCccCCccCHHHHHHHHHHHHHHHhcCCeEEeCCeEccccCCcc
Confidence            3445668999999999988776666553           5899999999998888887732               2355


Q ss_pred             ceEEEecCCCChhhhhccccEeee---EEeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGT---LIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~---V~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ..+++.+ |....+.+..++.||+   |+.+++.+|+++.+|+++.||++|+||+|+.+..|++++||+|+|.
T Consensus       385 yePTvl~-~V~~~m~~s~eEtFGPla~v~kFdteeEvi~~ANdt~vGLAgYvfs~~~s~~~rVae~LEvGmVG  456 (503)
T KOG2451|consen  385 YEPTVLS-NVTQNMLVSSEETFGPLASVFKFDTEEEVIEWANDTRVGLAGYVFSNNLSRLFRVAEALEVGMVG  456 (503)
T ss_pred             ccceEee-cCCccceeeccccccccceeeeeCCHHHHHHHhccCccceeeEEeccCHHHHHHHHHHHhcceee
Confidence            6888888 8888899999999996   5889999999999999999999999999999999999999999983

>COG1012 PutA NAD-dependent aldehyde dehydrogenases [Energy production and conversion]

Probab=99.21  E-value=9.5e-12  Score=127.51  Aligned_cols=127  Identities=28%  Similarity=0.416  Sum_probs=104.9

Q ss_pred             EeCCcccCCCCcccccceeccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhcC------------
Q psy5844         314 VAGGGRAGDKGFYVQPTVFANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANNS------------  369 (442)
Q Consensus       314 ~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~~------------  369 (442)
                      ..|..|...+..+|+..+++.|...+... ++            .+||++....++...+.|+.+...            
T Consensus       271 n~GQ~C~a~~R~~V~~~v~d~f~~~l~~~-~~~l~~Gd~~d~~t~~Gpli~~~~~~~v~~~i~~a~~~G~~~~~Gg~~~~  349 (472)
T COG1012         271 NAGQRCTAASRLIVHESVYDEFVERLVAR-AASLKVGDPLDPSTDLGPLISEEQLDRVEGYIEDAVAEGARLLAGGKRPG  349 (472)
T ss_pred             CCCCCccCCeEEEEehhhHHHHHHHHHHH-HhcCCCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCEEEeCCcCCC
Confidence            33444444455788888888887766555 33            279999999999988888877442            


Q ss_pred             CCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         370 DYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       370 ~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++.+.++|++ +....+.+++++.||+|   +.+++.+||++.+|+++|||+++|||+|..+++++++++++|+||
T Consensus       350 g~~~~PTv~~-~v~~~~~i~~eEiFGPVl~v~~~~~~dEAi~lAN~t~yGL~a~v~t~d~~~~~~~~~~l~aG~v~  424 (472)
T COG1012         350 GYFVEPTILE-GVTPDMRIAREEIFGPVLPVIRFKDEEEAIELANDTEYGLAAAIFTRDLARAFRVARRLEAGMVG  424 (472)
T ss_pred             CeEECCEEEe-cCCCCChhhhccccCCceEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCeeEEE
Confidence            5677889998 66889999999999975   778999999999999999999999999999999999999999986

>PRK11241 gabD succinate-semialdehyde dehydrogenase I; Provisional

Probab=99.19  E-value=1.7e-11  Score=126.52  Aligned_cols=127  Identities=26%  Similarity=0.407  Sum_probs=102.8

Q ss_pred             eCCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------C
Q psy5844         315 AGGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------S  369 (442)
Q Consensus       315 ~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~  369 (442)
                      .|..|......|||..|+++|...+....+++           +||++.-..++++.+.++.+..              .
T Consensus       285 aGQ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~GG~~~~~~  364 (482)
T PRK11241        285 AGQTCVCANRLYVQDGVYDRFAEKLQQAVSKLHIGDGLEKGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHELG  364 (482)
T ss_pred             CCCCCccCeEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCCCC
Confidence            33344444557889999888877665544443           6899998888988888877621              1


Q ss_pred             CCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         370 DYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       370 ~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++.+.++|++ +.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++++++++|++|+||
T Consensus       365 g~f~~Ptvl~-~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~aN~s~~GL~a~Vft~d~~~a~~~~~~l~~G~v~  439 (482)
T PRK11241        365 GNFFQPTILV-DVPANAKVAKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVG  439 (482)
T ss_pred             CeEEeeEEEE-CCCCCChhhhCcCcCCEEEEEEeCCHHHHHHHhhCCCCCceEEEEcCCHHHHHHHHHHcCccEEE
Confidence            3456889997 66778899999999975   668999999999999999999999999999999999999999986

>PLN02174 aldehyde dehydrogenase family 3 member H1

Probab=99.16  E-value=3.5e-11  Score=123.53  Aligned_cols=126  Identities=16%  Similarity=0.223  Sum_probs=101.2

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHhc------------CCCCc
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERANN------------SDYGL  373 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an~------------~~~gl  373 (442)
                      |..|...+..+|+..++++|...+....+.          .+||+++-..++.+.+.|+.+..            .++.+
T Consensus       250 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~ga~~~~GG~~~~~g~~~  329 (484)
T PLN02174        250 GQACISPDYILTTKEYAPKVIDAMKKELETFYGKNPMESKDMSRIVNSTHFDRLSKLLDEKEVSDKIVYGGEKDRENLKI  329 (484)
T ss_pred             CCCCCcCcEEEEeHHHHHHHHHHHHHHHHhhcCCCCcccCCcCCCCCHHHHHHHHHHHHHHHcCCEEEECCCcCCCCCEE
Confidence            333333445788888888877766544333          37899998889988888876521            13457


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++|++ |.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       330 ~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~~eai~~aN~~~~gLaa~vft~d~~~a~~~~~~l~aG~v~  400 (484)
T PLN02174        330 APTILL-DVPLDSLIMSEEIFGPLLPILTLNNLEESFDVIRSRPKPLAAYLFTHNKKLKERFAATVSAGGIV  400 (484)
T ss_pred             EEEEEe-cCCCCChhhcCCcCCCeEEEecCCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHcCCcceEE
Confidence            889997 77777899999999975   668899999999999999999999999999999999999999986

>PLN02766 coniferyl-aldehyde dehydrogenase

Probab=99.12  E-value=8.8e-11  Score=121.86  Aligned_cols=126  Identities=32%  Similarity=0.553  Sum_probs=102.6

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CC
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SD  370 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~  370 (442)
                      |..+...+..||+..|+++|...+....+++           +||++.-..++.+++.|+.+..              .+
T Consensus       299 GQ~C~a~~ri~V~~si~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g  378 (501)
T PLN02766        299 GEICVASSRVYVQEGIYDEFVKKLVEKAKDWVVGDPFDPRARQGPQVDKQQFEKILSYIEHGKREGATLLTGGKPCGDKG  378 (501)
T ss_pred             CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCC
Confidence            3344444557999999998887776554443           7899998889998888876521              13


Q ss_pred             CCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+.++|++ +.+..+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       379 ~~~~PTvl~-~v~~~~~i~~eE~FGPVl~v~~~~~~deai~~aN~~~~GL~a~Vft~d~~~a~~~~~~l~~G~v~  452 (501)
T PLN02766        379 YYIEPTIFT-DVTEDMKIAQDEIFGPVMSLMKFKTVEEAIKKANNTKYGLAAGIVTKDLDVANTVSRSIRAGTIW  452 (501)
T ss_pred             eEEeeEEEe-cCCCCChhhhCCccCceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            446888887 66677899999999975   668999999999999999999999999999999999999999986

>TIGR01780 SSADH succinate-semialdehyde dehydrogenase

Probab=99.12  E-value=8.7e-11  Score=120.57  Aligned_cols=119  Identities=25%  Similarity=0.381  Sum_probs=97.2

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV  377 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v  377 (442)
                      ...||+..++++|...+....+++           +||+++-..++.+.+.++.+..              .++.+.++|
T Consensus       265 ~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~il~gg~~~~~~g~~~~Ptv  344 (448)
T TIGR01780       265 NRLYVHDGIYDEFAKKLAEAVKKLKVGNGLDEGVTQGPLINEKAVEKVEKHIADAVEKGAKVVTGGKRHELGGNFFEPTV  344 (448)
T ss_pred             ceeechHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcCEE
Confidence            446888888887776665444332           6889888888888888876521              244578899


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +. +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       345 l~-~~~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~~~vfs~d~~~~~~~~~~l~~G~v~  411 (448)
T TIGR01780       345 LS-NVTQDMLVAKEETFGPLAPVFKFDDEEEVIAIANDTEVGLAAYFFSRDLATIWRVAEALEYGMVG  411 (448)
T ss_pred             Ee-cCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCccEEE
Confidence            97 66667899999999975   668999999999999999999999999999999999999999986

SSADH enzyme belongs to the aldehyde dehydrogenase family (pfam00171), sharing a common evolutionary origin and enzymatic mechanism with lactaldehyde dehydrogenase. Like in lactaldehyde dehydrogenase and succinate semialdehyde dehydrogenase, the mammalian catalytic glutamic acid and cysteine residues are conserved in all the enzymes of this family (PS00687, PS00070).

>TIGR03374 ABALDH 1-pyrroline dehydrogenase

Probab=99.10  E-value=1.3e-10  Score=119.85  Aligned_cols=120  Identities=24%  Similarity=0.477  Sum_probs=96.6

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCCCceE
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAA  375 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~  375 (442)
                      .+..+|+..++++|...+....+.           .+||+++...++++.+.|+.+..               .++.+.+
T Consensus       282 ~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~~~~P  361 (472)
T TIGR03374       282 ACRIYAQRGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVMKAVEEAKALGHIKVITGGEKRKGNGYYFAP  361 (472)
T ss_pred             CCEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHcCCeEEEeCCccCCCCCeEEee
Confidence            345688888887777665443333           26899888888888777766532               1344688


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|+. +.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       362 tvl~-~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~  430 (472)
T TIGR03374       362 TLLA-GAKQDDAIVQKEVFGPVVSITSFDDEEQVVNWANDSQYGLASSVWTKDVGRAHRLSARLQYGCTW  430 (472)
T ss_pred             EEEe-CCCCCChhhhCCccCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            9997 56677899999999975   668999999999999999999999999999999999999999986

Members of this protein family are 1-pyrroline dehydrogenase (1.5.1.35), also called gamma-aminobutyraldehyde dehydrogenase. This enzyme can follow putrescine transaminase (EC 2.6.1.82) for a two-step conversion of putrescine to gamma-aminobutyric acid (GABA). The member from Escherichia coli is characterized as a homotetramer that binds one NADH per momomer. This enzyme belongs to the medium-chain aldehyde dehydrogenases, and is quite similar in sequence to the betaine aldehyde dehydrogenase (EC 1.2.1.8) family.

>cd07140 ALDH_F1L_FTFDH 10-formyltetrahydrofolate dehydrogenase, ALDH family 1L

Probab=99.09  E-value=9.4e-11  Score=121.20  Aligned_cols=125  Identities=26%  Similarity=0.519  Sum_probs=99.0

Q ss_pred             CcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCC
Q psy5844         317 GGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDY  371 (442)
Q Consensus       317 g~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~  371 (442)
                      ..+......+|+..++++|...+....+++           +||+++-..++++.+.|+.+..              .++
T Consensus       289 Q~C~a~~rl~V~~~i~~~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~~~~g~  368 (486)
T cd07140         289 ENCIAAGRLFVEESIHDEFVRRVVEEVKKMKIGDPLDRSTDHGPQNHKAHLDKLVEYCERGVKEGATLVYGGKQVDRPGF  368 (486)
T ss_pred             CCCCCCcEEEEcHHHHHHHHHHHHHHHHhCCccCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCe
Confidence            333334456888888877776665444443           6899998888998888876521              234


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeC--CHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~--~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|++ |.+..+.+.+++.||+|   ..++  +.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       369 ~~~Ptvl~-~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~  443 (486)
T cd07140         369 FFEPTVFT-DVEDHMFIAKEESFGPIMIISKFDDGDVDGVLQRANDTEYGLASGVFTKDINKALYVSDKLEAGTVF  443 (486)
T ss_pred             eECCEEEe-CCCCCChhhhCCCCCCeEEEEEcCCCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            57889998 67778899999999976   4454  68999999999999999999999999999999999999986

10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1) in humans, is a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the conversion of 10-formyltetrahydrofolate to tetrahydrofolate and CO2. The ALDH domain is also capable of the oxidation of short chain aldehydes to their corresponding acids.

>PLN02278 succinic semialdehyde dehydrogenase

Probab=99.08  E-value=1.3e-10  Score=120.61  Aligned_cols=126  Identities=24%  Similarity=0.339  Sum_probs=101.2

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CC
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SD  370 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~  370 (442)
                      |..|......||+..++++|...+....+++           +||++.-..++.+++.++.+..              .+
T Consensus       300 GQ~C~a~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g  379 (498)
T PLN02278        300 GQTCVCANRILVQEGIYDKFAEAFSKAVQKLVVGDGFEEGVTQGPLINEAAVQKVESHVQDAVSKGAKVLLGGKRHSLGG  379 (498)
T ss_pred             CCCCcCCcEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCC
Confidence            3344444557889999888877765554443           6889888888888888876521              23


Q ss_pred             CCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+.++|+. +....+.+++++.||+|   +..++.+|+++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       380 ~~~~Ptvl~-~v~~~~~~~~~E~FGPVl~v~~~~~~deai~~~N~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~  453 (498)
T PLN02278        380 TFYEPTVLG-DVTEDMLIFREEVFGPVAPLTRFKTEEEAIAIANDTEAGLAAYIFTRDLQRAWRVSEALEYGIVG  453 (498)
T ss_pred             ceEeeEEEe-cCCCCChhhhCCCcCCEEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEE
Confidence            456788887 66677889999999975   668999999999999999999999999999999999999999986

>PLN02203 aldehyde dehydrogenase

Probab=99.08  E-value=2e-10  Score=118.31  Aligned_cols=126  Identities=13%  Similarity=0.128  Sum_probs=101.0

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHhc------------CCCCc
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERANN------------SDYGL  373 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an~------------~~~gl  373 (442)
                      |..+...+..+||..|+++|...+....+.          .+||+++...++.+++.++.+..            .++.+
T Consensus       249 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~~~~~~gg~~~~~g~~i  328 (484)
T PLN02203        249 GQACIAIDYVLVEERFAPILIELLKSTIKKFFGENPRESKSMARILNKKHFQRLSNLLKDPRVAASIVHGGSIDEKKLFI  328 (484)
T ss_pred             CCccccCCeEEEcHHHHHHHHHHHHHHHHHhcCCCCCcCCCcCCCCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEE
Confidence            344444455788888888777666544333          37999999999998888877531            23456


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++|+. |....+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       329 ~PTvl~-~v~~d~~i~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~vft~d~~~a~~~~~~l~~G~V~  399 (484)
T PLN02203        329 EPTILL-NPPLDSDIMTEEIFGPLLPIITVKKIEDSIAFINSKPKPLAIYAFTNNEKLKRRILSETSSGSVT  399 (484)
T ss_pred             eeEEEe-cCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            789997 66667889999999975   668999999999999999999999999999999999999999986

>PLN02466 aldehyde dehydrogenase family 2 member

Probab=99.08  E-value=1.8e-10  Score=120.32  Aligned_cols=123  Identities=31%  Similarity=0.536  Sum_probs=98.5

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCc
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGL  373 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl  373 (442)
                      |......+|+..++++|...+......           .+||++.-..++.+++.++.+..              .++.+
T Consensus       339 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g~~i  418 (538)
T PLN02466        339 CCAGSRTFVHERVYDEFVEKAKARALKRVVGDPFKKGVEQGPQIDSEQFEKILRYIKSGVESGATLECGGDRFGSKGYYI  418 (538)
T ss_pred             cCcCcEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCCccCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCceEE
Confidence            333455789999998887766532222           26898888888888888776521              13346


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++|+. +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|.+++.+++++|++|+||
T Consensus       419 ~Ptvl~-~v~~d~~i~~eE~FGPVl~v~~~~d~deAi~~aN~~~~GL~a~VfT~d~~~a~~~~~~l~aG~v~  489 (538)
T PLN02466        419 QPTVFS-NVQDDMLIAQDEIFGPVQSILKFKDLDEVIRRANNTRYGLAAGVFTQNLDTANTLSRALRVGTVW  489 (538)
T ss_pred             EEEEEe-cCCCCCchhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCeeeEE
Confidence            889887 56677889999999975   668999999999999999999999999999999999999999985

>PLN02419 methylmalonate-semialdehyde dehydrogenase [acylating]

Probab=99.08  E-value=2.1e-10  Score=120.17  Aligned_cols=95  Identities=19%  Similarity=0.258  Sum_probs=82.9

Q ss_pred             cCCcccccccCCHHHHHHHHhc------------------CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANN------------------SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEE  405 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~------------------~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~  405 (442)
                      +||++.-..++.+.+.++.+..                  .++.+.++|++ +....+.+++++.||+|   +.+++.+|
T Consensus       429 ~GPlis~~~~~~v~~~i~~A~~~GAkvl~GG~~~~~~~~~~G~f~~PTVL~-~v~~d~~i~~eEiFGPVl~V~~~~~~dE  507 (604)
T PLN02419        429 LGPVISKQAKERICRLIQSGVDDGAKLLLDGRDIVVPGYEKGNFIGPTILS-GVTPDMECYKEEIFGPVLVCMQANSFDE  507 (604)
T ss_pred             ccCCCCHHHHHHHHHHHHHHHhcCCEEEeCCccccCCCCCCCeEEeeEEEe-CCCCCCHHHcCCCcCCEEEEEecCCHHH
Confidence            6899998899999888876521                  13457788887 67778899999999975   66899999


Q ss_pred             HHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         406 VIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       406 av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       508 AI~laN~s~yGLaasVfT~d~~~a~~~a~~l~aG~V~  544 (604)
T PLN02419        508 AISIINKNKYGNGAAIFTSSGAAARKFQMDIEAGQIG  544 (604)
T ss_pred             HHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCeeeEE
Confidence            9999999999999999999999999999999999986

>PRK10090 aldehyde dehydrogenase A; Provisional

Probab=99.05  E-value=2.5e-10  Score=115.47  Aligned_cols=119  Identities=24%  Similarity=0.473  Sum_probs=94.1

Q ss_pred             CCcccccceeccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAA  376 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~  376 (442)
                      +..||+..++++|...+....++            .+||+++-..++.+++.++.+..              .++.+.++
T Consensus       218 ~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Pt  297 (409)
T PRK10090        218 ERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPT  297 (409)
T ss_pred             eEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEecE
Confidence            34577777777666655433222            35788888888888888876521              13456788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |++ |.+..+.+++++.||+|   ..+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       298 vl~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~G~v~  365 (409)
T PRK10090        298 LLL-DVRQEMSIMHEETFGPVLPVVAFDTLEEAIAMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETY  365 (409)
T ss_pred             EEe-CCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            887 66677899999999975   668899999999999999999999999999999999999999986

>TIGR03250 PhnAcAld_DH putative phosphonoacetaldehyde dehydrogenase

Probab=99.05  E-value=2.3e-10  Score=118.13  Aligned_cols=123  Identities=24%  Similarity=0.268  Sum_probs=97.7

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------CCCCceEE
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------SDYGLAAA  376 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~  376 (442)
                      +......||+..++++|...+....++           .+||++.-..++.+++.++.+..           .++.+.++
T Consensus       280 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~PT  359 (472)
T TIGR03250       280 CTAVKRMLVQESVADRFTELLVEKTRAWRYGDPMDPSVDMGTVIDEAAAILFEARVNEAIAQGARLLLGNVRDGALYAPT  359 (472)
T ss_pred             CCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCEEEcCE
Confidence            333345688888888777666544333           26788888888888777776632           23456788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|.+++.++++++++|+||
T Consensus       360 vl~-~v~~~~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~  427 (472)
T TIGR03250       360 VLD-RVDPSMTLVREETFGPVSPVIRFCDIDDAIRISNSTAYGLSSGVCTNRLDYITRFIAELQVGTVN  427 (472)
T ss_pred             EEe-CCCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHHCCcceEE
Confidence            887 56667899999999975   668999999999999999999999999999999999999999986

It seems reasonably certain then, that this enzyme catalyzes the NAD-dependent oxidation of phosphonoacetaldehyde to phosphonoacetate, bridging the metabolic gap between PhnW and PhnA. We propose the name phosphonoacetaldehyde dehydrogenase and the gene symbol PhnY for this enzyme.

>cd07559 ALDH_ACDHII_AcoD-like Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II and Staphylococcus aureus AldA1 (SACOL0154)-like

Probab=99.04  E-value=3e-10  Score=117.55  Aligned_cols=123  Identities=22%  Similarity=0.363  Sum_probs=98.6

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------------C
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------------S  369 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------------~  369 (442)
                      |......+|+..++++|...+....+++           +||++.-..++.+.+.++.+..                  .
T Consensus       283 C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~  362 (480)
T cd07559         283 CTCPSRALVQESIYDEFIERAVERFEAIKVGNPLDPETMMGAQVSKDQLEKILSYVDIGKEEGAEVLTGGERLTLGGLDK  362 (480)
T ss_pred             CCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccccCCC
Confidence            3333457888889888877665544443           5888888888888888876531                  2


Q ss_pred             CCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         370 DYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       370 ~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++.+.++++. +.+..+.+.+++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       363 g~~~~Ptvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~a~~l~~G~v~  437 (480)
T cd07559         363 GYFYEPTLIK-GGNNDMRIFQEEIFGPVLAVITFKDEEEAIAIANDTEYGLGGGVWTRDINRALRVARGIQTGRVW  437 (480)
T ss_pred             CcEECeEEEe-CCCCCCcHHhcCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCcceEE
Confidence            3456788887 55667889999999975   678899999999999999999999999999999999999999986

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane, as well as, the uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences.

>cd07113 ALDH_PADH_NahF Escherichia coli NAD+-dependent phenylacetaldehyde dehydrogenase PadA-like

Probab=99.03  E-value=3.4e-10  Score=117.09  Aligned_cols=120  Identities=24%  Similarity=0.452  Sum_probs=97.6

Q ss_pred             CCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceEE
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAA  376 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~  376 (442)
                      ....+||..++++|...+....+++           +||++.-..++.+.+.++.+..              .++.+.++
T Consensus       287 ~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Pt  366 (477)
T cd07113         287 PERFYVHRSKFDELVTKLKQALSSFQVGSPMDESVMFGPLANQPHFDKVCSYLDDARAEGDEIVRGGEALAGEGYFVQPT  366 (477)
T ss_pred             CcEEEECHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCeeEeCE
Confidence            3456888888888777665544432           6899998888888888887521              13446788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       367 vl~-~v~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~  434 (477)
T cd07113         367 LVL-ARSADSRLMREETFGPVVSFVPYEDEEELIQLINDTPFGLTASVWTNNLSKALRYIPRIEAGTVW  434 (477)
T ss_pred             EEe-cCCCCChHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            887 55667889999999975   668899999999999999999999999999999999999999985

NAD+-dependent, homodimeric, phenylacetaldehyde dehydrogenase (PADH, EC=1.2.1.39) PadA of Escherichia coli involved in the catabolism of 2-phenylethylamine, and other related sequences, are present in this CD. Also included is the Pseudomonas fluorescens ST StyD PADH involved in styrene catabolism, the Sphingomonas sp. LB126 FldD protein involved in fluorene degradation, and the Novosphingobium aromaticivorans NahF salicylaldehyde dehydrogenase involved in the NAD+-dependent conversion of salicylaldehyde to salicylate.

>TIGR03216 OH_muco_semi_DH 2-hydroxymuconic semialdehyde dehydrogenase

Probab=99.03  E-value=3.2e-10  Score=117.38  Aligned_cols=120  Identities=28%  Similarity=0.426  Sum_probs=96.4

Q ss_pred             CCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc-------------------CCC
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN-------------------SDY  371 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~-------------------~~~  371 (442)
                      .+..+||..++++|...+....+++           +||++.-..++.+.+.++.+..                   .++
T Consensus       286 ~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~  365 (481)
T TIGR03216       286 TERVYVERPIFDRFVAALKARAESLKIGVPDDPATNMGPLISAEHRDKVLSYYALAVEEGATVVTGGGVPDFGDALAGGA  365 (481)
T ss_pred             CeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccccCCCCc
Confidence            3456888888877776665444432           6788888888888777775521                   245


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|++ +.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|.+++.++++++++|+||
T Consensus       366 ~~~PTvl~-~v~~~~~i~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~  438 (481)
T TIGR03216       366 WVQPTIWT-GLPDSARVVTEEIFGPCCHIAPFDSEEEVIALANDTPYGLAASVWTEDLSRAHRVARQMEVGIVW  438 (481)
T ss_pred             eEccEEEe-CCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCccEEE
Confidence            57889987 55677889999999975   668899999999999999999999999999999999999999986

Members of this protein family are 2-hydroxymuconic semialdehyde dehydrogenase. Many aromatic compounds are catabolized by way of the catechol, via the meta-cleavage pathway, to pyruvate and acetyl-CoA. This enzyme performs the second of seven steps in that pathway for catechol degradation.

>cd07085 ALDH_F6_MMSDH Methylmalonate semialdehyde dehydrogenase and ALDH family members 6A1 and 6B2

Probab=99.02  E-value=3.8e-10  Score=116.86  Aligned_cols=120  Identities=18%  Similarity=0.179  Sum_probs=94.7

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc------------------CCCC
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN------------------SDYG  372 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~------------------~~~g  372 (442)
                      ....+|+..++++|...+....++           .+||+++-..++.+++.++.+..                  .++.
T Consensus       281 ~~rv~V~~~i~~~f~~~L~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~~~g~~  360 (478)
T cd07085         281 LSVAVAVGDEADEWIPKLVERAKKLKVGAGDDPGADMGPVISPAAKERIEGLIESGVEEGAKLVLDGRGVKVPGYENGNF  360 (478)
T ss_pred             CeEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCcCCCCeE
Confidence            344677777777766655443333           26888888888888888876521                  1334


Q ss_pred             ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.++|++ +....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       361 ~~Ptvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~  432 (478)
T cd07085         361 VGPTILD-NVTPDMKIYKEEIFGPVLSIVRVDTLDEAIAIINANPYGNGAAIFTRSGAAARKFQREVDAGMVG  432 (478)
T ss_pred             EcCEEEe-cCCCCChhhhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            6678887 55566889999999975   668999999999999999999999999999999999999999986

Methylmalonate semialdehyde dehydrogenase (MMSDH, EC=1.2.1.27) [acylating] from Bacillus subtilis is involved in valine metabolism and catalyses the NAD+- and CoA-dependent oxidation of methylmalonate semialdehyde into propionyl-CoA. Mitochondrial human MMSDH ALDH6A1 and Arabidopsis MMSDH ALDH6B2 are also present in this CD.

>PRK13473 gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=99.02  E-value=2.5e-10  Score=118.18  Aligned_cols=124  Identities=22%  Similarity=0.426  Sum_probs=99.5

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhcC---------------CC
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANNS---------------DY  371 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~~---------------~~  371 (442)
                      .|...+..+||..++++|...+....+.+           +||++.-..++.+.+.++.+...               ++
T Consensus       279 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~G~a~v~~gg~~~~~~g~  358 (475)
T PRK13473        279 DCTAACRIYAQRGIYDDLVAKLAAAVATLKVGDPDDEDTELGPLISAAHRDRVAGFVERAKALGHIRVVTGGEAPDGKGY  358 (475)
T ss_pred             CCCCCeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHcCCeEEEECCCcCCCCce
Confidence            33334457888888888777665444433           68999888888888888775322               34


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|+. +.+..+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       359 ~~~Ptvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~  431 (475)
T PRK13473        359 YYEPTLLA-GARQDDEIVQREVFGPVVSVTPFDDEDQAVRWANDSDYGLASSVWTRDVGRAHRVSARLQYGCTW  431 (475)
T ss_pred             eEcCEEEe-cCCCCChhhhCCccCCeEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            56788887 56667889999999975   668899999999999999999999999999999999999999985

>cd07141 ALDH_F1AB_F2_RALDH1 NAD+-dependent retinal dehydrogenase 1, ALDH families 1A, 1B, and 2-like

Probab=99.02  E-value=4.4e-10  Score=116.41  Aligned_cols=120  Identities=37%  Similarity=0.577  Sum_probs=96.2

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEE
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAA  376 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~  376 (442)
                      ....||+..+++.|...+....++           .+||++.-..++.+.+.++.+..              .++.+.++
T Consensus       292 ~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Pt  371 (481)
T cd07141         292 GSRTFVQESIYDEFVKRSVERAKKRVVGNPFDPKTEQGPQIDEEQFKKILELIESGKKEGAKLECGGKRHGDKGYFIQPT  371 (481)
T ss_pred             CeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEEeeE
Confidence            345688888888777666443332           36888888888888888876521              23456788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |+. +.+..+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|.+++.++++++++|+||
T Consensus       372 vl~-~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~G~v~  439 (481)
T cd07141         372 VFS-DVTDDMRIAKEEIFGPVQQIFKFKTIDEVIERANNTTYGLAAAVFTKDIDKAITFSNALRAGTVW  439 (481)
T ss_pred             EEe-cCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCeEE
Confidence            886 56677889999999975   668899999999999999999999999999999999999999985

NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36) also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1) in humans, is a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism.

>cd07128 ALDH_MaoC-N N-terminal domain of the monoamine oxidase C dehydratase

Probab=99.01  E-value=4.4e-10  Score=116.60  Aligned_cols=127  Identities=17%  Similarity=0.181  Sum_probs=100.7

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc----------------
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN----------------  368 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~----------------  368 (442)
                      |..|......||+..+++.|...+....+.+           +||+++-..++.+++.|+.+..                
T Consensus       289 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~lGpli~~~~~~~i~~~i~~a~~~A~vl~GG~~~~~~~~  368 (513)
T cd07128         289 GQKCTAIRRAFVPEARVDAVIEALKARLAKVVVGDPRLEGVRMGPLVSREQREDVRAAVATLLAEAEVVFGGPDRFEVVG  368 (513)
T ss_pred             CCcccCCceEEEehHHHHHHHHHHHHHHHhcccCCCccCCCCcCCCCCHHHHHHHHHHHHHHHhCCEEEECCCccccccC
Confidence            3334344557999999998887776555443           6899998888888888876521                


Q ss_pred             ----CCCCceEEEecCCCC-hhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHcccc--c
Q psy5844         369 ----SDYGLAAAVFTKDLD-KTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR--A  438 (442)
Q Consensus       369 ----~~~gl~~~v~s~d~~-~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~--~  438 (442)
                          .++.+.++|++.... ..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.+++++|+  +
T Consensus       369 ~~~~~g~~~~PTvl~~v~~~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~asvft~d~~~~~~~~~~l~~~~  448 (513)
T cd07128         369 ADAEKGAFFPPTLLLCDDPDAATAVHDVEAFGPVATLMPYDSLAEAIELAARGRGSLVASVVTNDPAFARELVLGAAPYH  448 (513)
T ss_pred             CCCCCCEEECCEEEeccCCcccchHHhCCCcCCeEEEEeeCCHHHHHHHHhcCCCCeeEEEEeCCHHHHHHHHHHHHhhC
Confidence                134577899974443 35789999999975   6688999999999999999999999999999999999997  9


Q ss_pred             cccC
Q psy5844         439 GTVW  442 (442)
Q Consensus       439 G~v~  442 (442)
                      |.||
T Consensus       449 G~v~  452 (513)
T cd07128         449 GRLL  452 (513)
T ss_pred             CEEE
Confidence            9886

The N-terminal domain of the MaoC dehydratase, a monoamine oxidase regulatory protein. Orthologs of MaoC include PaaZ (Escherichia coli) and PaaN (Pseudomonas putida), which are putative ring-opening enzymes of the aerobic phenylacetic acid (PA) catabolic pathway. The C-terminal domain of MaoC has sequence similarity to enoyl-CoA hydratase. Also included in this CD is a novel Burkholderia xenovorans LB400 ALDH of the aerobic benzoate oxidation (box) pathway. This pathway involves first the synthesis of a CoA thio-esterified aromatic acid, with subsequent dihydroxylation and cleavage steps, yielding the CoA thio-esterified aliphatic aldehyde, 3,4-dehydroadipyl-CoA semialdehyde, which is further converted into its corresponding CoA acid by the Burkholderia LB400 ALDH.

>cd07136 ALDH_YwdH-P39616 Bacillus subtilis aldehyde dehydrogenase ywdH-like

Probab=99.01  E-value=3.2e-10  Score=115.92  Aligned_cols=119  Identities=15%  Similarity=0.249  Sum_probs=94.2

Q ss_pred             CCcccccceeccCcchhHHHHHhh----------cCCcccccccCCHHHHHHHHh--------cCCCCceEEEecCCCCh
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI----------FGPVQQLIRFSSIEEVIERAN--------NSDYGLAAAVFTKDLDK  384 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~----------fgPvl~v~~~~~~~eai~~an--------~~~~gl~~~v~s~d~~~  384 (442)
                      ...+||..++++|...+....+.+          +||++.-..++.+++.++.+.        ..++.+.+++++ +.+.
T Consensus       244 ~rv~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~i~~a~~~~gG~~~~~g~~~~Ptvl~-~v~~  322 (449)
T cd07136         244 DYVLVHESVKEKFIKELKEEIKKFYGEDPLESPDYGRIINEKHFDRLAGLLDNGKIVFGGNTDRETLYIEPTILD-NVTW  322 (449)
T ss_pred             CEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCCccCcCCHHHHHHHHHHHhcceEEECCCcCCCCCEEeeEEEe-cCCC
Confidence            446778888877776665444443          567777777777777766441        125567889997 5566


Q ss_pred             hhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         385 TNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       385 ~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       323 ~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  383 (449)
T cd07136         323 DDPVMQEEIFGPILPVLTYDTLDEAIEIIKSRPKPLALYLFSEDKKVEKKVLENLSFGGGC  383 (449)
T ss_pred             cChHHhccccCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            7889999999975   668999999999999999999999999999999999999999986

Uncharacterized Bacillus subtilis ywdH aldehyde dehydrogenase (locus P39616) most closely related to the ALDHs and fatty ALDHs of families 3 and 14, and similar sequences, are included in this CD.

>cd07137 ALDH_F3FHI Plant aldehyde dehydrogenase family 3 members F1, H1, and I1 and related proteins

Probab=99.01  E-value=5.2e-10  Score=114.05  Aligned_cols=121  Identities=20%  Similarity=0.225  Sum_probs=97.6

Q ss_pred             CCCCcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHhc------------CCCCceEEEe
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERANN------------SDYGLAAAVF  378 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an~------------~~~gl~~~v~  378 (442)
                      ..+..+||..++++|...+....++          .+||++.-..++.+++.++.+..            .++.+.++|+
T Consensus       244 a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~ga~~l~gg~~~~~g~~~~Ptvl  323 (432)
T cd07137         244 APDYVLVEESFAPTLIDALKNTLEKFFGENPKESKDLSRIVNSHHFQRLSRLLDDPSVADKIVHGGERDEKNLYIEPTIL  323 (432)
T ss_pred             CCCEEEEcHHHHHHHHHHHHHHHHHHhCCCCCccCCcCCcCCHHHHHHHHHHHHHHHhCCeEEeCCCcCCCCCEEeeEEE
Confidence            3345688888888877766544443          36899888888888888876631            1334567888


Q ss_pred             cCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         379 TKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       379 s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      . +.+..+.+++++.||+|   ...++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       324 ~-~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  389 (432)
T cd07137         324 L-DPPLDSSIMTEEIFGPLLPIITVKKIEESIEIINSRPKPLAAYVFTKNKELKRRIVAETSSGGVT  389 (432)
T ss_pred             e-cCCCcchhhhcccccCceEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcCcEE
Confidence            6 55666789999999975   678999999999999999999999999999999999999999985

Aldehyde dehydrogenase family members 3F1, 3H1, and 3I1 (ALDH3F1, ALDH3H1, and ALDH3I1), and similar plant sequences, are in this CD. In Arabidopsis thaliana, stress-regulated expression of ALDH3I1 was observed in leaves and osmotic stress expression of ALDH3H1 was observed in root tissue, whereas, ALDH3F1 expression was not stress responsive. Functional analysis of ALDH3I1 suggest it may be involved in a detoxification pathway in plants that limits aldehyde accumulation and oxidative stress.

>cd07107 ALDH_PhdK-like Nocardioides 2-carboxybenzaldehyde dehydrogenase, PhdK-like

Probab=99.00  E-value=5.2e-10  Score=115.14  Aligned_cols=126  Identities=21%  Similarity=0.460  Sum_probs=100.6

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc----------------
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN----------------  368 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~----------------  368 (442)
                      |..+...+..||+..++++|...+....+++           +||+++...++.+.+.++.+..                
T Consensus       256 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~  335 (456)
T cd07107         256 GQSCGSTSRLFVHESIYDEVLARVVERVAAIKVGDPTDPATTMGPLVSRQQYDRVMHYIDSAKREGARLVTGGGRPEGPA  335 (456)
T ss_pred             CCCCcCCcEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCcccccc
Confidence            4444444567888888888877765544433           6899998888888888876521                


Q ss_pred             --CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         369 --SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       369 --~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                        .++.+.++|+. +....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       336 ~~~g~~~~PTvl~-~v~~~~~i~~eE~FGPvl~i~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~~~~~~l~~G~v~  413 (456)
T cd07107         336 LEGGFYVEPTVFA-DVTPGMRIAREEIFGPVLSVLRWRDEAEMVAQANGVEYGLTAAIWTNDISQAHRTARRVEAGYVW  413 (456)
T ss_pred             CCCCceECCEEEE-CCCCCChhhhCCCCCceEEEEeeCCHHHHHHHHhCCCCcceEEEECCCHHHHHHHHHhcCcCEEE
Confidence              13456788887 66677889999999975   668999999999999999999999999999999999999999885

Nocardioides sp. strain KP72-carboxybenzaldehyde dehydrogenase (PhdK), an enzyme involved in phenanthrene degradation, and other similar sequences, are present in this CD.

>TIGR02278 PaaN-DH phenylacetic acid degradation protein paaN

Probab=99.00  E-value=3.2e-10  Score=120.98  Aligned_cols=130  Identities=15%  Similarity=0.177  Sum_probs=102.8

Q ss_pred             EEeCCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc-------------
Q psy5844         313 LVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN-------------  368 (442)
Q Consensus       313 ~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~-------------  368 (442)
                      ...|..|......||+..++++|...+....+.+           +||+++-..++.+++.|+.+..             
T Consensus       286 ~~sGQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~t~~Gpli~~~~~~~i~~~i~~a~~~Ga~vl~GG~~~~  365 (663)
T TIGR02278       286 IKAGQKCTAIRRVIVPKALLEAVLKALQARLAKVVLGDPREEGVDMGPLVSLEQRADVEAAVAALLAAGAEVRLGGPGRL  365 (663)
T ss_pred             hcCCCCccCCceEEEeHHHHHHHHHHHHHHHHhccCCCccccCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCC
Confidence            3344445445567999999988887765544443           6999999999999888886532             


Q ss_pred             CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccc--cccccC
Q psy5844         369 SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL--RAGTVW  442 (442)
Q Consensus       369 ~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l--~~G~v~  442 (442)
                      .++.+.++|+++.......+.+++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.+++++|  ++|+||
T Consensus       366 ~g~~~~PTvl~~~~~~~~~i~~eE~FGPVl~V~~~~~~~eai~~aN~~~~gL~a~vft~d~~~~~~~~~~l~~~~G~v~  444 (663)
T TIGR02278       366 DGAFFPPTLLLAEDPWAGAVHATEAFGPVATFFPYGDRAEAARLAARGGGSLVATLATSDPEEARQFILGLAPYHGRLH  444 (663)
T ss_pred             CCeeEccEEEeeCCcchhhHHhccccCCeEEEEeeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHHHHhhCCEEE
Confidence            13457789997444344578999999975   668999999999999999999999999999999999999  799986

This family includes paaN genes from Pseudomonas, Sinorhizobium, Rhodopseudomonas, Escherichia, Deinococcus and Corynebacterium. Another homology family (TIGR02288) includes several other species.

>PRK11563 bifunctional aldehyde dehydrogenase/enoyl-CoA hydratase; Provisional

Probab=99.00  E-value=3.9e-10  Score=121.04  Aligned_cols=121  Identities=15%  Similarity=0.186  Sum_probs=97.8

Q ss_pred             CCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------------CC
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------------SD  370 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------------~~  370 (442)
                      ....|||..|+++|...+....+.+           +||+++-..++.+.+.|+.+..                    .+
T Consensus       299 ~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~d~~t~~GPli~~~~~~~i~~~i~~a~~~a~vl~Gg~~~~~~~~~~~~~g  378 (675)
T PRK11563        299 IRRAIVPRALVDAVIEALRARLAKVVVGDPRLEGVRMGALASLEQREDVREKVAALLAAAEIVFGGPDSFEVVGADAEKG  378 (675)
T ss_pred             ceeEEeeHHHHHHHHHHHHHHHhcCccCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEECCcccccccCCCCCCC
Confidence            3457899999988887766544443           6999999999998877775411                    24


Q ss_pred             CCceEEEecCCCC-hhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHcccc--ccccC
Q psy5844         371 YGLAAAVFTKDLD-KTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR--AGTVW  442 (442)
Q Consensus       371 ~gl~~~v~s~d~~-~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~--~G~v~  442 (442)
                      +.+.++|++.... ....+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.+++++|+  +|.||
T Consensus       379 ~f~~PTvl~~v~~~~~~~i~~eEiFGPVl~V~~~~~~~eai~~aN~s~~gL~asvft~d~~~a~~~~~~l~~~~G~v~  456 (675)
T PRK11563        379 AFFPPTLLYCDDPLEAPAVHDVEAFGPVSTLMPYDDLDEAIELAARGKGSLVASLVTADPEVARELVLGAAPWHGRLL  456 (675)
T ss_pred             eeECCEEEeccCchhhhhHhhccccCCceEEEecCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHhcCCEEE
Confidence            4568899984443 25688999999975   6689999999999999999999999999999999999997  89886

>cd07152 ALDH_BenzADH NAD-dependent benzaldehyde dehydrogenase II-like

Probab=98.99  E-value=6e-10  Score=114.31  Aligned_cols=119  Identities=17%  Similarity=0.305  Sum_probs=95.1

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhcC-----------CCCceEEEecC
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANNS-----------DYGLAAAVFTK  380 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~~-----------~~gl~~~v~s~  380 (442)
                      +..+|+..++++|...+....++           .+||++....++.+.+.++.+...           ++.+.++++. 
T Consensus       257 ~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl~-  335 (443)
T cd07152         257 GRHLVHESVADAYTAKLAAKAKHLPVGDPATGQVALGPLINARQLDRVHAIVDDSVAAGARLEAGGTYDGLFYRPTVLS-  335 (443)
T ss_pred             eeEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEeccCcCCEEEcCEEEe-
Confidence            44688888887777665443333           358888888888888888776432           2345678887 


Q ss_pred             CCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         381 DLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       381 d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       336 ~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  400 (443)
T cd07152         336 GVKPGMPAFDEEIFGPVAPVTVFDSDEEAVALANDTEYGLSAGIISRDVGRAMALADRLRTGMLH  400 (443)
T ss_pred             cCCCCChhhhccccCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEE
Confidence            55667889999999975   668899999999999999999999999999999999999999985

NAD-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) is involved in the oxidation of benzyl alcohol to benzoate. In Acinetobacter calcoaceticus, this process is carried out by the chromosomally encoded, benzyl alcohol dehydrogenase (xylB) and benzaldehyde dehydrogenase II (xylC) enzymes; whereas in Pseudomonas putida they are encoded by TOL plasmids.

>cd07094 ALDH_F21_LactADH-like ALDH subfamily: NAD+-dependent, lactaldehyde dehydrogenase, ALDH family 21 A1, and related proteins

Probab=98.99  E-value=5.8e-10  Score=114.81  Aligned_cols=120  Identities=25%  Similarity=0.396  Sum_probs=96.0

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------CCCCceEEEec
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFT  379 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s  379 (442)
                      ....||+..+++.|...+....++           .+||+++-..++.+++.++.+..           .++.+.+++++
T Consensus       267 ~~~i~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~  346 (453)
T cd07094         267 VQRIYVHEELYDEFIEAFVAAVKKLKVGDPLDEDTDVGPLISEEAAERVERWVEEAVEAGARLLCGGERDGALFKPTVLE  346 (453)
T ss_pred             CeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCccCCCeEEeCEEEe
Confidence            344688888887777666544433           25888888888888888886522           23345678887


Q ss_pred             CCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         380 KDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       380 ~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                       +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       347 -~~~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~g~v~  411 (453)
T cd07094         347 -DVPRDTKLSTEETFGPVVPIIRYDDFEEAIRIANSTDYGLQAGIFTRDLNVAFKAAEKLEVGGVM  411 (453)
T ss_pred             -CCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeeEEECCCHHHHHHHHHhcCcCeEE
Confidence             55667889999999975   668999999999999999999999999999999999999999985

ALDH subfamily which includes Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123), and NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) and like sequences.

>cd07142 ALDH_F2BC Arabidosis aldehyde dehydrogenase family 2 B4, B7, C4-like

Probab=98.99  E-value=4.8e-10  Score=115.99  Aligned_cols=126  Identities=30%  Similarity=0.559  Sum_probs=99.7

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CC
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SD  370 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~  370 (442)
                      |..|......||+..++++|...+.....+           .+||++.-..++.+.+.++.+..              .+
T Consensus       282 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~g  361 (476)
T cd07142         282 GQCCCAGSRTFVHESIYDEFVEKAKARALKRVVGDPFRKGVEQGPQVDKEQFEKILSYIEHGKEEGATLITGGDRIGSKG  361 (476)
T ss_pred             CCCCCCCeeEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCCCC
Confidence            344444455788888888877666443332           36898888888888888876521              13


Q ss_pred             CCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+.++|+. +.+..+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       362 ~~~~Ptvl~-~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~a~~~~~~l~~G~v~  435 (476)
T cd07142         362 YYIQPTIFS-DVKDDMKIARDEIFGPVQSILKFKTVDEVIKRANNSKYGLAAGVFSKNIDTANTLSRALKAGTVW  435 (476)
T ss_pred             eeEccEEee-cCCCCChhhhCCccCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            347788887 56677889999999975   668899999999999999999999999999999999999999985

Included in this CD is the Arabidosis aldehyde dehydrogenase family 2 members B4 and B7 (EC=1.2.1.3), which are mitochondrial homotetramers that oxidize acetaldehyde and glycolaldehyde, but not L-lactaldehyde. Also in this group, is the Arabidosis cytosolic, homotetramer ALDH2C4 (EC=1.2.1.3), an enzyme involved in the oxidation of sinapalehyde and coniferaldehyde.

>PRK09406 gabD1 succinic semialdehyde dehydrogenase; Reviewed

Probab=98.99  E-value=4.2e-10  Score=115.66  Aligned_cols=120  Identities=23%  Similarity=0.347  Sum_probs=95.0

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEE
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAA  376 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~  376 (442)
                      .+..+|+..++++|...+....++           .+||+++-..++.+.+.++.+..              .++.+.++
T Consensus       268 ~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~~~~g~~~~Pt  347 (457)
T PRK09406        268 AKRFIVHADVYDAFAEKFVARMAALRVGDPTDPDTDVGPLATEQGRDEVEKQVDDAVAAGATILCGGKRPDGPGWFYPPT  347 (457)
T ss_pred             CeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCceEccE
Confidence            344677777777766655433333           26888888888888888776521              23456788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |+. +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       348 vl~-~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~  415 (457)
T PRK09406        348 VIT-DITPDMRLYTEEVFGPVASLYRVADIDEAIEIANATTFGLGSNAWTRDEAEQERFIDDLEAGQVF  415 (457)
T ss_pred             Eee-cCCCCCHHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            886 56667889999999965   678999999999999999999999999999999999999999985

>PRK13968 putative succinate semialdehyde dehydrogenase; Provisional

Probab=98.99  E-value=4.2e-10  Score=115.80  Aligned_cols=124  Identities=19%  Similarity=0.293  Sum_probs=97.7

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCC
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYG  372 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~g  372 (442)
                      .+......|||..+++++...+....+++           +||+++...++.....++.+..              .++.
T Consensus       267 ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~  346 (462)
T PRK13968        267 VCAAAKRFIIEEGIASAFTERFVAAAAALKMGDPRDEENALGPMARFDLRDELHHQVEATLAEGARLLLGGEKIAGAGNY  346 (462)
T ss_pred             CCcCCcEEEECHhHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCceE
Confidence            33344557888888887777665544432           6888888888888777776521              1345


Q ss_pred             ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.++|++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       347 ~~Ptvl~-~v~~~~~~~~eE~FGPVl~v~~~~d~~eai~~~n~~~~gLs~~v~t~d~~~a~~~~~~l~~G~v~  418 (462)
T PRK13968        347 YAPTVLA-NVTPEMTAFREELFGPVAAITVAKDAEHALELANDSEFGLSATIFTTDETQARQMAARLECGGVF  418 (462)
T ss_pred             ECCEEEe-CCCCCChHHhCCCcCCEEEEEEECCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            6678887 55666788999999975   678999999999999999999999999999999999999999985

>cd07106 ALDH_AldA-AAD23400 Streptomyces aureofaciens putative aldehyde dehydrogenase AldA (AAD23400)-like

Probab=98.99  E-value=6.8e-10  Score=114.00  Aligned_cols=121  Identities=29%  Similarity=0.594  Sum_probs=97.6

Q ss_pred             CCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhcC--------------CCCceE
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANNS--------------DYGLAA  375 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~~--------------~~gl~~  375 (442)
                      ..+..+|+..++++|...+....+++           +||++.-..++.+.+.++.+...              ++.+.+
T Consensus       257 a~~rv~V~~~v~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~~g~~~~P  336 (446)
T cd07106         257 AIKRLYVHESIYDEFCEALVALAKAAVVGDGLDPGTTLGPVQNKMQYDKVKELVEDAKAKGAKVLAGGEPLDGPGYFIPP  336 (446)
T ss_pred             CCcEEEEccccHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeeEcC
Confidence            33456889999888877765544443           68888888888888887765321              334678


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       337 tvl~-~v~~~~~i~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~~~~G~v~  405 (446)
T cd07106         337 TIVD-DPPEGSRIVDEEQFGPVLPVLKYSDEDEVIARANDSEYGLGASVWSSDLERAEAVARRLEAGTVW  405 (446)
T ss_pred             EEEe-CCCCCCHHHhcCccCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCccEEE
Confidence            8887 56677889999999975   668899999999999999999999999999999999999999985

Putative aldehyde dehydrogenase, AldA, from Streptomyces aureofaciens (locus AAD23400) and other similar sequences are present in this CD.

>cd07151 ALDH_HBenzADH NADP+-dependent p-hydroxybenzaldehyde dehydrogenase-like

Probab=98.98  E-value=6e-10  Score=114.94  Aligned_cols=124  Identities=23%  Similarity=0.336  Sum_probs=97.5

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhcC-----------CCCceE
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANNS-----------DYGLAA  375 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~~-----------~~gl~~  375 (442)
                      .+......+|+..++++|...+....++           .+||++....++.+++.++.+...           ++.+.+
T Consensus       273 ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~ga~vl~gg~~~g~~~~P  352 (465)
T cd07151         273 ICMAINRIIVHEDVYDEFVEKFVERVKALPYGDPSDPDTVVGPLINESQVDGLLDKIEQAVEEGATLLVGGEAEGNVLEP  352 (465)
T ss_pred             CCcCCcEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCCEEEecCCcCCEEEcc
Confidence            3333455688888888777665443333           368888888888888888766322           234567


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|+. +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       353 tvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  421 (465)
T cd07151         353 TVLS-DVTNDMEIAREEIFGPVAPIIKADDEEEALELANDTEYGLSGAVFTSDLERGVQFARRIDAGMTH  421 (465)
T ss_pred             EEEe-CCCCCCchhhCcCcCCeEEEEeeCCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhCCcCeEE
Confidence            8887 55566789999999975   668899999999999999999999999999999999999999985

NADP+-dependent, p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid and other related sequences are included in this CD.

>TIGR02299 HpaE 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase

Probab=98.98  E-value=7.2e-10  Score=115.06  Aligned_cols=120  Identities=27%  Similarity=0.423  Sum_probs=94.7

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------------C
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------------S  369 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------------~  369 (442)
                      ....||+..+++++.+.+....++           .+||+++-..++.+++.++.+..                     .
T Consensus       281 ~~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~~~  360 (488)
T TIGR02299       281 SSRLLVQESIAEDFVEKLVERVRAIRVGHPLDPETEVGPLIHPEHLAKVLGYVEAAEKEGATILVGGERAPTFRGEDLGR  360 (488)
T ss_pred             CcEEEEcHHHHHHHHHHHHHHHhhCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCcccccccCCC
Confidence            345678888887776655443333           36888888888888877775521                     1


Q ss_pred             CCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         370 DYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       370 ~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++.+.++|+. |.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       361 g~~~~Ptvl~-~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  435 (488)
T TIGR02299       361 GNYVLPTVFT-GADNHMRIAQEEIFGPVLTVIPFKDEEEAIEKANDTRYGLAGYVWTNDVGRAHRVALALEAGMIW  435 (488)
T ss_pred             CeEEccEEEe-cCCCCCchhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEE
Confidence            3345678887 66677889999999975   668899999999999999999999999999999999999999986

This model represents the dehydrogenase responsible for the conversion of 5-carboxymethyl-2-hydroxymuconate semialdehyde to 5-carboxymethyl-2-hydroxymuconate (a tricarboxylic acid). This is the step in the degradation of 4-hydroxyphenylacetic acid via homoprotocatechuate following the oxidative opening of the aromatic ring.

>cd07101 ALDH_SSADH2_GabD2 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 2-like

Probab=98.98  E-value=7.1e-10  Score=114.10  Aligned_cols=121  Identities=24%  Similarity=0.363  Sum_probs=96.7

Q ss_pred             CCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhcC---------------CCCce
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANNS---------------DYGLA  374 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~~---------------~~gl~  374 (442)
                      ..+..|||..++++|...+....+++           +||+++-..++.+++.++.+...               ++.+.
T Consensus       261 a~~rv~V~~~i~d~f~~~L~~~~~~~~~G~~~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~~~~~~~~~~  340 (454)
T cd07101         261 SIERIYVHESVYDEFVRRFVARTRALRLGAALDYGPDMGSLISQAQLDRVTAHVDDAVAKGATVLAGGRARPDLGPYFYE  340 (454)
T ss_pred             cCeEEEEcHHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCeEEc
Confidence            33456888899888877665444333           58899888888888888765211               23455


Q ss_pred             EEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         375 AAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       375 ~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++++. +.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       341 Ptvl~-~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~a~~~~~~l~~G~v~  410 (454)
T cd07101         341 PTVLT-GVTEDMELFAEETFGPVVSIYRVADDDEAIELANDTDYGLNASVWTRDGARGRRIAARLRAGTVN  410 (454)
T ss_pred             CEEEe-CCCCCCHHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEE
Confidence            77776 55567889999999965   668999999999999999999999999999999999999999986

Succinate-semialdehyde dehydrogenase 2 (SSADH2) and similar proteins are in this CD. SSADH1 (GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde to succinate. SSADH activity in Mycobacterium tuberculosis is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731), however ,the Vmax of GabD1 was shown to be much higher than that of GabD2, and GabD2 (SSADH2) is likely to serve physiologically as a dehydrogenase for a different aldehyde(s).

>cd07132 ALDH_F3AB Aldehyde dehydrogenase family 3 members A1, A2, and B1 and related proteins

Probab=98.97  E-value=1e-09  Score=112.37  Aligned_cols=119  Identities=20%  Similarity=0.312  Sum_probs=95.3

Q ss_pred             CCcccccceeccCcchhHHHHHhh----------cCCcccccccCCHHHHHHHHh--------cCCCCceEEEecCCCCh
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI----------FGPVQQLIRFSSIEEVIERAN--------NSDYGLAAAVFTKDLDK  384 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~----------fgPvl~v~~~~~~~eai~~an--------~~~~gl~~~v~s~d~~~  384 (442)
                      ...+|+..++++|...+....+++          +||+++...++++.+.++.++        ..++.+.++++. |.+.
T Consensus       244 ~rv~V~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~gpli~~~~~~~v~~~i~~a~~~~gg~~~~~~~~~~Ptvl~-~v~~  322 (443)
T cd07132         244 DYVLCTPEVQEKFVEALKKTLKEFYGEDPKESPDYGRIINDRHFQRLKKLLSGGKVAIGGQTDEKERYIAPTVLT-DVKP  322 (443)
T ss_pred             cEEEEcHHHHHHHHHHHHHHHHHhcCCCCCcccccCCcCCHHHHHHHHHHHhCCEEEeCCccCCCCCEEeeEEEe-CCCC
Confidence            446888888888877665444433          588888777777777666331        124557788887 6666


Q ss_pred             hhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         385 TNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       385 ~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.+++++.||+|   ...++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       323 ~~~~~~eE~FgPvl~v~~~~~~~eai~~an~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~  383 (443)
T cd07132         323 SDPVMQEEIFGPILPIVTVNNLDEAIEFINSREKPLALYVFSNNKKVINKILSNTSSGGVC  383 (443)
T ss_pred             CChHHhccccCceeEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEE
Confidence            7889999999975   668899999999999999999999999999999999999999986

NAD(P)+-dependent, aldehyde dehydrogenase, family 3 members A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and similar sequences are included in this CD. Human ALDH3A1 is a homodimer with a critical role in cellular defense against oxidative stress; it catalyzes the oxidation of various cellular membrane lipid-derived aldehydes. Corneal crystalline ALDH3A1 protects the cornea and underlying lens against UV-induced oxidative stress. Human ALDH3A2, a microsomal homodimer, catalyzes the oxidation of long-chain aliphatic aldehydes to fatty acids. Human ALDH3B1 is highly expressed in the kidney and liver and catalyzes the oxidation of various medium- and long-chain saturated and unsaturated aliphatic aldehydes.

>cd07148 ALDH_RL0313 Uncharacterized ALDH ( RL0313) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=98.96  E-value=8.7e-10  Score=113.42  Aligned_cols=121  Identities=25%  Similarity=0.341  Sum_probs=97.8

Q ss_pred             CCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhcC------------CCCceEEE
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANNS------------DYGLAAAV  377 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~~------------~~gl~~~v  377 (442)
                      .....||+..++++|...+....+++           +||++.-..++.+++.++.+...            ++.+.++|
T Consensus       267 a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~Ptv  346 (455)
T cd07148         267 SVQRVFVPAEIADDFAQRLAAAAEKLVVGDPTDPDTEVGPLIRPREVDRVEEWVNEAVAAGARLLCGGKRLSDTTYAPTV  346 (455)
T ss_pred             CCeEEEEcHhHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCeEcCEE
Confidence            33456888888888777765554443           68999988888888888876321            23456788


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++ +....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       347 l~-~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~~~~g~v~  413 (455)
T cd07148         347 LL-DPPRDAKVSTQEIFGPVVCVYSYDDLDEAIAQANSLPVAFQAAVFTKDLDVALKAVRRLDATAVM  413 (455)
T ss_pred             Ee-CCCCCCHHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcCeEE
Confidence            87 55567789999999975   668999999999999999999999999999999999999999985

Uncharacterized aldehyde dehydrogenase (locus RL0313) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>PLN00412 NADP-dependent glyceraldehyde-3-phosphate dehydrogenase; Provisional

Probab=98.96  E-value=5.6e-10  Score=115.80  Aligned_cols=119  Identities=23%  Similarity=0.333  Sum_probs=93.2

Q ss_pred             CCcccccceeccCcchhHHHHHhh----------cCCcccccccCCHHHHHHHHhc-----------CCCCceEEEecCC
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI----------FGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFTKD  381 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~----------fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s~d  381 (442)
                      +..+||..|++++...+....+++          +||++.-..++.+.+.++.+..           .++.+.++++. +
T Consensus       302 ~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~~~~~~g~~~~Ptvl~-~  380 (496)
T PLN00412        302 KVVLVMESVADALVEKVNAKVAKLTVGPPEDDCDITPVVSESSANFIEGLVMDAKEKGATFCQEWKREGNLIWPLLLD-N  380 (496)
T ss_pred             eEEEEcHHHHHHHHHHHHHHHHhCccCCCcccCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEecCCCCCeEEecEEEe-C
Confidence            445777777776665554333332          5788887777777777766532           23446788887 5


Q ss_pred             CChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         382 LDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       382 ~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+..+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       381 v~~~~~i~~eE~FgPvl~v~~~~~~deai~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  444 (496)
T PLN00412        381 VRPDMRIAWEEPFGPVLPVIRINSVEEGIHHCNASNFGLQGCVFTRDINKAILISDAMETGTVQ  444 (496)
T ss_pred             CCCCCHHHhCcCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            6667889999999975   778999999999999999999999999999999999999999985

>cd07133 ALDH_CALDH_CalB Coniferyl aldehyde dehydrogenase-like

Probab=98.96  E-value=1.1e-09  Score=111.74  Aligned_cols=120  Identities=17%  Similarity=0.207  Sum_probs=94.2

Q ss_pred             CCCcccccceeccCcchhHHHHHh---------hcCCcccccccCCHHHHHHHHhc----------------CCCCceEE
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE---------IFGPVQQLIRFSSIEEVIERANN----------------SDYGLAAA  376 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e---------~fgPvl~v~~~~~~~eai~~an~----------------~~~gl~~~  376 (442)
                      ....||+..++++|...+....++         .+||+++...++.+++.++.+..                .++.+.++
T Consensus       244 ~~rv~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~Pt  323 (434)
T cd07133         244 PDYVLVPEDKLEEFVAAAKAAVAKMYPTLADNPDYTSIINERHYARLQGLLEDARAKGARVIELNPAGEDFAATRKLPPT  323 (434)
T ss_pred             CCEEEEcHHHHHHHHHHHHHHHHHhcCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEecCCCCcCCCCCcEEeeE
Confidence            344677777776666655443333         35788888888888877776521                24557788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++. +.+..+.+.+++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       324 vl~-~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~  391 (434)
T cd07133         324 LVL-NVTDDMRVMQEEIFGPILPILTYDSLDEAIDYINARPRPLALYYFGEDKAEQDRVLRRTHSGGVT  391 (434)
T ss_pred             EEe-CCCCCCcccccccCCCeeEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            887 55667889999999975   668899999999999999999999999999999999999999885

Coniferyl aldehyde dehydrogenase (CALDH, EC=1.2.1.68) of Pseudomonas sp. strain HR199 (CalB) which catalyzes the NAD+-dependent oxidation of coniferyl aldehyde to ferulic acid, and similar sequences, are present in this CD.

>cd07123 ALDH_F4-17_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH families 4 and 17

Probab=98.96  E-value=5.8e-10  Score=116.36  Aligned_cols=126  Identities=22%  Similarity=0.384  Sum_probs=98.6

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhcC---------------
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANNS---------------  369 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~~---------------  369 (442)
                      |..|......||+..++++|...+....++           .+||+++...++++++.++.+...               
T Consensus       315 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~v~~a~~~~Ga~vl~gg~~~~~~  394 (522)
T cd07123         315 GQKCSAASRAYVPESLWPEVKERLLEELKEIKMGDPDDFSNFMGAVIDEKAFDRIKGYIDHAKSDPEAEIIAGGKCDDSV  394 (522)
T ss_pred             CCCCCCCcEEEEcHHHHHHHHHHHHHHHhhCccCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCEEEeCCCcCCCC
Confidence            333444455799999998888776544433           378999998999888888876321               


Q ss_pred             CCCceEEEecCCCChhhhhccccEeeeE---EeeC--CHHHHHHhhccCC-ccceeEEeccChhHHHHHHcccc--cccc
Q psy5844         370 DYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFS--SIEEVIERANNSD-YGLAAAVFTKDLDKTNYVTQGLR--AGTV  441 (442)
Q Consensus       370 ~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~--~~~~av~~an~~~-yGl~~~vft~d~~~~~~~~~~l~--~G~v  441 (442)
                      ++.+.++|++ +.+..+.+++++.||+|   +.++  +.+|+++.+|++. |||++||||+|..++.+++++|+  +|+|
T Consensus       395 g~f~~PTvl~-~v~~~~~i~~eEiFGPVl~V~~~~~~~~~eai~~aN~~~~~gL~a~Vft~d~~~~~~~~~~l~~~~G~v  473 (522)
T cd07123         395 GYFVEPTVIE-TTDPKHKLMTEEIFGPVLTVYVYPDSDFEETLELVDTTSPYALTGAIFAQDRKAIREATDALRNAAGNF  473 (522)
T ss_pred             CceEcCEEEe-CCCCCChhhhcCCCCCeEEEEEeCCCCHHHHHHHHhCCCCcCceEEEEeCCHHHHHHHHHhhhhcCcEE
Confidence            3456789998 66677899999999976   3355  4699999999985 99999999999999999999974  9998


Q ss_pred             C
Q psy5844         442 W  442 (442)
Q Consensus       442 ~  442 (442)
                      |
T Consensus       474 ~  474 (522)
T cd07123         474 Y  474 (522)
T ss_pred             E
Confidence            6

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), families 4 and 17: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), also known as ALDH4A1 in humans, is a mitochondrial homodimer involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. This is a necessary step in the pathway interconnecting the urea and tricarboxylic acid cycles. The preferred substrate is glutamic gamma-semialdehyde, other substrates include succinic, glutaric and adipic semialdehydes. Also included in this CD is the Aldh17 Drosophila melanogaster (Q9VUC0) P5CDH and similar sequences.

>PRK13252 betaine aldehyde dehydrogenase; Provisional

Probab=98.95  E-value=9.5e-10  Score=114.13  Aligned_cols=120  Identities=32%  Similarity=0.501  Sum_probs=94.8

Q ss_pred             CCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------------CCCC
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------------SDYG  372 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------------~~~g  372 (442)
                      ....+||..++++|...+....+++           +||+++...++.+.+.++.+..                  .++.
T Consensus       287 ~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~g~~  366 (488)
T PRK13252        287 GTRVFVQKSIKAAFEARLLERVERIRIGDPMDPATNFGPLVSFAHRDKVLGYIEKGKAEGARLLCGGERLTEGGFANGAF  366 (488)
T ss_pred             CeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCCCeE
Confidence            3456778888777766654443333           6888888888888777775411                  1445


Q ss_pred             ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.++|+. +....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       367 ~~Ptvl~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~I~t~d~~~~~~~~~~l~~G~v~  438 (488)
T PRK13252        367 VAPTVFT-DCTDDMTIVREEIFGPVMSVLTFDDEDEVIARANDTEYGLAAGVFTADLSRAHRVIHQLEAGICW  438 (488)
T ss_pred             EccEEec-cCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCccEEE
Confidence            6778887 56667889999999975   668899999999999999999999999999999999999999985

>cd07108 ALDH_MGR_2402 Magnetospirillum NAD(P)+-dependent aldehyde dehydrogenase MSR-1-like

Probab=98.95  E-value=7.7e-10  Score=113.99  Aligned_cols=124  Identities=22%  Similarity=0.370  Sum_probs=96.4

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------------
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------------  368 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------------  368 (442)
                      .+...+..||+..++++|...+....+++           +||++.-..++.+.+.++.+..                  
T Consensus       259 ~C~a~~rv~V~~~i~~~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~~ga~vl~gG~~~~~~~~  338 (457)
T cd07108         259 SCTAGSRLFVHEDIYDAFLEKLVAKLSKLKIGDPLDEATDIGAIISEKQFAKVCGYIDLGLSTSGATVLRGGPLPGEGPL  338 (457)
T ss_pred             CCCCCeEEEEehHHHHHHHHHHHHHHhhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCCEEEeCCCcCccCCC
Confidence            33334456888888887776665443332           6888888888888888876532                  


Q ss_pred             -CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         369 -SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       369 -~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                       .++.+.++|++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       339 ~~g~~~~Ptvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLs~~vft~d~~~a~~~~~~l~~g~v~  415 (457)
T cd07108         339 ADGFFVQPTIFS-GVDNEWRLAREEIFGPVLCAIPWKDEDEVIAMANDSHYGLAAYVWTRDLGRALRAAHALEAGWVQ  415 (457)
T ss_pred             CCceEECCEEEe-cCCCCChhhhcCCCCceEEeecCCCHHHHHHHHhCCCcCceeEEEcCCHHHHHHHHHhcCcceEE
Confidence             13345577776 56667889999999975   567899999999999999999999999999999999999999985

NAD(P)+-dependent aldehyde dehydrogenase of Magnetospirillum gryphiswaldense MSR-1 (MGR_2402) , and other similar sequences, are present in this CD.

>cd07116 ALDH_ACDHII-AcoD Ralstonia eutrophus NAD+-dependent acetaldehyde dehydrogenase II-like

Probab=98.95  E-value=9.1e-10  Score=114.00  Aligned_cols=125  Identities=22%  Similarity=0.312  Sum_probs=97.3

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc----------------
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN----------------  368 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~----------------  368 (442)
                      |..|......+||..++++|.+.+....++           .+||++....++.+++.++.+..                
T Consensus       280 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~  359 (479)
T cd07116         280 GEVCTCPSRALIQESIYDRFMERALERVKAIKQGNPLDTETMIGAQASLEQLEKILSYIDIGKEEGAEVLTGGERNELGG  359 (479)
T ss_pred             CCCCCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCC
Confidence            333444455788888888877766544443           25788888888888888776521                


Q ss_pred             --CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         369 --SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       369 --~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                        .++.+.+++++. .. .+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       360 ~~~g~~~~Ptvl~~-~~-~~~~~~eE~FGPVl~v~~~~~~~eai~~aN~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~  436 (479)
T cd07116         360 LLGGGYYVPTTFKG-GN-KMRIFQEEIFGPVLAVTTFKDEEEALEIANDTLYGLGAGVWTRDGNTAYRMGRGIQAGRVW  436 (479)
T ss_pred             CCCCeeecCeEEcc-CC-CChhhhcCCcCceEEEEEeCCHHHHHHHHhCCcccceEEEEcCCHHHHHHHHHhcCcCeEE
Confidence              123357888874 33 7889999999975   668899999999999999999999999999999999999999986

Included in this CD is the NAD+-dependent, acetaldehyde dehydrogenase II (AcDHII, AcoD, EC=1.2.1.3) from Ralstonia (Alcaligenes) eutrophus H16 involved in the catabolism of acetoin and ethanol, and similar proteins, such as, the dimeric dihydrolipoamide dehydrogenase of the acetoin dehydrogenase enzyme system of Klebsiella pneumonia. Also included are sequences similar to the NAD+-dependent chloroacetaldehyde dehydrogenases (AldA and AldB) of Xanthobacter autotrophicus GJ10 which are involved in the degradation of 1,2-dichloroethane. These proteins apparently require RpoN factors for expression.

>cd07130 ALDH_F7_AASADH NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase, ALDH family members 7A1 and 7B

Probab=98.95  E-value=7.1e-10  Score=114.60  Aligned_cols=119  Identities=18%  Similarity=0.302  Sum_probs=94.8

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEE
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAA  376 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~  376 (442)
                      .+..||+..++++|.+.+....++           .+||++.-..++.+.+.++.+..              .++.+.++
T Consensus       281 ~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PT  360 (474)
T cd07130         281 TRRLIVHESIYDEVLERLKKAYKQVRIGDPLDDGTLVGPLHTKAAVDNYLAAIEEAKSQGGTVLFGGKVIDGPGNYVEPT  360 (474)
T ss_pred             CeEEEEcHhHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEccE
Confidence            345688888887777665443333           26889988888888888877632              13456788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHcc--ccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQG--LRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~--l~~G~v~  442 (442)
                      |+..+ .. +.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.+++++  +++|+||
T Consensus       361 vl~~~-~~-~~i~~eE~FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~g~v~  429 (474)
T cd07130         361 IVEGL-SD-APIVKEETFAPILYVLKFDTLEEAIAWNNEVPQGLSSSIFTTDLRNAFRWLGPKGSDCGIVN  429 (474)
T ss_pred             EEecC-CC-CHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhhcCcceEEEE
Confidence            98744 44 889999999975   66899999999999999999999999999999999987  9999885

Alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as ALDH7A1, Antiquitin-1, ALDH7B, or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), is a NAD+-dependent ALDH. Human ALDH7A1 is involved in the pipecolic acid pathway of lysine catabolism, catalyzing the oxidation of alpha-aminoadipic semialdehyde to alpha-aminoadipate. Arabidopsis thaliana ALDH7B4 appears to be an osmotic-stress-inducible ALDH gene encoding a turgor-responsive or stress-inducible ALDH. The Streptomyces clavuligerus P6CDH appears to be involved in cephamycin biosynthesis, catalyzing the second stage of the two-step conversion of lysine to alpha-aminoadipic acid. The ALDH7A1 enzyme and others in this group have been observed as tetramers, yet the bacterial P6CDH enzyme has been reported as a monomer.

>cd07095 ALDH_SGSD_AstD N-succinylglutamate 5-semialdehyde dehydrogenase, AstD-like

Probab=98.95  E-value=1.1e-09  Score=111.82  Aligned_cols=118  Identities=19%  Similarity=0.218  Sum_probs=93.2

Q ss_pred             CCcccccc-eeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceEE
Q psy5844         323 KGFYVQPT-VFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAA  376 (442)
Q Consensus       323 ~g~~v~pt-i~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~  376 (442)
                      ...||+.. ++++|...+....+++           +||++.-..++.+.+.++.+..              .++.+.++
T Consensus       244 ~rv~V~~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~i~~~v~~a~~~ga~~l~gg~~~~~~g~~~~Pt  323 (431)
T cd07095         244 RRLIVPDGAVGDAFLERLVEAAKRLRIGAPDAEPPFMGPLIIAAAAARYLLAQQDLLALGGEPLLAMERLVAGTAFLSPG  323 (431)
T ss_pred             eEEEEcCcchHHHHHHHHHHHHHhCCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHhcCCEEEeCCCcCCCCCeEEcCE
Confidence            44688888 8888777665544432           5788777777777776665521              23456788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |+.  .+..+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       324 v~~--v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~s~d~~~a~~~~~~l~~G~v~  390 (431)
T cd07095         324 IID--VTDAADVPDEEIFGPLLQVYRYDDFDEAIALANATRFGLSAGLLSDDEALFERFLARIRAGIVN  390 (431)
T ss_pred             EEe--cCCCChHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEE
Confidence            883  5555889999999975   668999999999999999999999999999999999999999985

N-succinylglutamate 5-semialdehyde dehydrogenase or succinylglutamic semialdehyde dehydrogenase (SGSD, E. coli AstD, EC=1.2.1.71) involved in L-arginine degradation via the arginine succinyltransferase (AST) pathway and catalyzes the NAD+-dependent reduction of succinylglutamate semialdehyde into succinylglutamate.

>cd07111 ALDH_F16 Aldehyde dehydrogenase family 16A1-like

Probab=98.95  E-value=1e-09  Score=113.27  Aligned_cols=123  Identities=24%  Similarity=0.412  Sum_probs=97.6

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCc
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGL  373 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl  373 (442)
                      +......+|+..++++|...+....+++           +||++....++.+.+.++.+..              .++.+
T Consensus       289 C~a~~ri~V~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~  368 (480)
T cd07111         289 CCAGSRLLVQESVAEELIRKLKERMSHLRVGDPLDKAIDMGAIVDPAQLKRIRELVEEGRAEGADVFQPGADLPSKGPFY  368 (480)
T ss_pred             CcCCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEE
Confidence            3333456888888888777665444442           5888888888888888876521              23456


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++|+. +....+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|.+++.++++++++|.||
T Consensus       369 ~Ptvl~-~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~aG~v~  439 (480)
T cd07111         369 PPTLFT-NVPPASRIAQEEIFGPVLVVLTFRTAKEAVALANNTPYGLAASVWSENLSLALEVALSLKAGVVW  439 (480)
T ss_pred             eeEEEe-cCCCCChhhcCCCCCCeeEeecCCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCEeeEE
Confidence            788887 56667889999999975   668899999999999999999999999999999999999999985

Uncharacterized aldehyde dehydrogenase family 16 member A1 (ALDH16A1) and other related sequences are present in this CD. The active site cysteine and glutamate residues are not conserved in the human ALDH16A1 protein sequence.

>cd07117 ALDH_StaphAldA1 Uncharacterized Staphylococcus aureus AldA1 (SACOL0154) aldehyde dehydrogenase-like

Probab=98.95  E-value=8e-10  Score=114.13  Aligned_cols=126  Identities=25%  Similarity=0.449  Sum_probs=98.6

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc----------------
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN----------------  368 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~----------------  368 (442)
                      |..+......+||..++++|...+....+++           +||++.-..++.+.+.++.+..                
T Consensus       275 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~  354 (475)
T cd07117         275 GQVCCAGSRIFVQEGIYDEFVAKLKEKFENVKVGNPLDPDTQMGAQVNKDQLDKILSYVDIAKEEGAKILTGGHRLTENG  354 (475)
T ss_pred             CCCCCCCeEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCcCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCcccc
Confidence            3344444556888888887776665444332           6888887888888777775411                


Q ss_pred             --CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         369 --SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       369 --~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                        .++.+.++|+. +.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       355 ~~~g~~~~Ptvl~-~~~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~  432 (475)
T cd07117         355 LDKGFFIEPTLIV-NVTNDMRVAQEEIFGPVATVIKFKTEDEVIDMANDSEYGLGGGVFTKDINRALRVARAVETGRVW  432 (475)
T ss_pred             CCCCeEEeeEEee-cCCCCChhhhCCCcCCeEEEEEECCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcceEE
Confidence              23457888887 56677889999999975   668899999999999999999999999999999999999999985

Uncharacterized aldehyde dehydrogenase from Staphylococcus aureus (AldA1, locus SACOL0154) and other similar sequences are present in this CD.

>PRK09457 astD succinylglutamic semialdehyde dehydrogenase; Reviewed

Probab=98.95  E-value=9.2e-10  Score=114.11  Aligned_cols=122  Identities=17%  Similarity=0.231  Sum_probs=94.9

Q ss_pred             ccCCCCccccccee-ccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhc--------------CCC
Q psy5844         319 RAGDKGFYVQPTVF-ANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANN--------------SDY  371 (442)
Q Consensus       319 ~~~~~g~~v~pti~-~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~--------------~~~  371 (442)
                      |......||+..++ ++|...+....++            .+||++....++.+.+.++.+..              .++
T Consensus       277 C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~vG~p~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~  356 (487)
T PRK09457        277 CTCARRLLVPQGAQGDAFLARLVAVAKRLTVGRWDAEPQPFMGAVISEQAAQGLVAAQAQLLALGGKSLLEMTQLQAGTG  356 (487)
T ss_pred             CCCCceEEEeccccHHHHHHHHHHHHhcCcCCCCCcCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccCCCCe
Confidence            33334568888887 7777665443322            26888888888888877776532              124


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|+  +.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..+++++++++++|+||
T Consensus       357 ~~~PTvl--~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~~N~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~  428 (487)
T PRK09457        357 LLTPGII--DVTGVAELPDEEYFGPLLQVVRYDDFDEAIRLANNTRFGLSAGLLSDDREDYDQFLLEIRAGIVN  428 (487)
T ss_pred             eEecEEe--ccCCCChHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            4677887  35556789999999975   668999999999999999999999999999999999999999985

>cd07090 ALDH_F9_TMBADH NAD+-dependent 4-trimethylaminobutyraldehyde dehydrogenase, ALDH family 9A1

Probab=98.94  E-value=1.1e-09  Score=112.92  Aligned_cols=120  Identities=28%  Similarity=0.467  Sum_probs=93.8

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-------------------CCC
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-------------------SDY  371 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-------------------~~~  371 (442)
                      ....+|++.++++|...+....++           .+||++....++.+.+.|+.+..                   .++
T Consensus       261 ~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~~g~  340 (457)
T cd07090         261 GTRVFVQRSIKDEFTERLVERTKKIRIGDPLDEDTQMGALISEEHLEKVLGYIESAKQEGAKVLCGGERVVPEDGLENGF  340 (457)
T ss_pred             CeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcccccCHHHHHHHHHHHHHHHHCCCEEEECCCcCcccccCCCCe
Confidence            344677888877777665544333           26788887788888887776531                   123


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|++ +....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       341 ~~~Ptvl~-~~~~~~~~~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~  413 (457)
T cd07090         341 YVSPCVLT-DCTDDMTIVREEIFGPVMSILPFDTEEEVIRRANDTTYGLAAGVFTRDLQRAHRVIAQLQAGTCW  413 (457)
T ss_pred             eECCEEEe-cCCCCChHHhCCCCCCeEEEEEECCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHhCCcCeEE
Confidence            45678876 55566788899999975   668899999999999999999999999999999999999999985

NAD+-dependent, 4-trimethylaminobutyraldehyde dehydrogenase (TMABADH, EC=1.2.1.47), also known as aldehyde dehydrogenase family 9 member A1 (ALDH9A1) in humans, is a cytosolic tetramer which catalyzes the oxidation of gamma-aminobutyraldehyde involved in 4-aminobutyric acid (GABA) biosynthesis and also oxidizes betaine aldehyde (gamma-trimethylaminobutyraldehyde) which is involved in carnitine biosynthesis.

>PLN02467 betaine aldehyde dehydrogenase

Probab=98.94  E-value=1.3e-09  Score=113.22  Aligned_cols=121  Identities=25%  Similarity=0.431  Sum_probs=96.7

Q ss_pred             CCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc----------------CCCCc
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN----------------SDYGL  373 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~----------------~~~gl  373 (442)
                      .....+|+..++++|...+....++           .+||++.-..++.+.+.++.+..                .++.+
T Consensus       296 a~~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~Gpli~~~~~~~v~~~v~~a~~~Ga~vl~gG~~~~~~~~g~~~  375 (503)
T PLN02467        296 ATSRLLVHERIASEFLEKLVKWAKNIKISDPLEEGCRLGPVVSEGQYEKVLKFISTAKSEGATILCGGKRPEHLKKGFFI  375 (503)
T ss_pred             CCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCCCeEE
Confidence            3345688888888777666544333           36888888888888888876521                13346


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+++++ +.+..+.+++++.||+|   ..+++.+|+++.+|+++|||+++|||+|..++.+++++|++|+||
T Consensus       376 ~Ptvl~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  446 (503)
T PLN02467        376 EPTIIT-DVTTSMQIWREEVFGPVLCVKTFSTEDEAIELANDSHYGLAGAVISNDLERCERVSEAFQAGIVW  446 (503)
T ss_pred             eeEEEe-CCCCCChHhhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            788887 56667889999999975   668899999999999999999999999999999999999999986

>PLN02315 aldehyde dehydrogenase family 7 member

Probab=98.94  E-value=1.2e-09  Score=113.47  Aligned_cols=120  Identities=18%  Similarity=0.314  Sum_probs=96.4

Q ss_pred             CCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceE
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAA  375 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~  375 (442)
                      .....||+..|+++|...+....+++           +||++....++.+++.++.+.+              .++.+.+
T Consensus       302 a~~rv~V~~~i~d~f~~~l~~~~~~l~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~g~~~~P  381 (508)
T PLN02315        302 TCRRLLLHESIYDDVLEQLLTVYKQVKIGDPLEKGTLLGPLHTPESKKNFEKGIEIIKSQGGKILTGGSAIESEGNFVQP  381 (508)
T ss_pred             CCeEEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCeEEec
Confidence            33456888888888777665444443           6899888888888888887742              1345667


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHc--cccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQ--GLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~--~l~~G~v~  442 (442)
                      +|+  +.+..+.+++++.||+|   ...++.+|+++.+|+++|||++||||+|..++.++++  ++++|+||
T Consensus       382 tvl--~v~~~~~i~~eE~FGPVl~V~~~~~~deai~~aN~~~~gL~a~Vft~d~~~a~~~~~~~~l~~G~v~  451 (508)
T PLN02315        382 TIV--EISPDADVVKEELFGPVLYVMKFKTLEEAIEINNSVPQGLSSSIFTRNPETIFKWIGPLGSDCGIVN  451 (508)
T ss_pred             EEE--ecCCCChHHhCCCcCCEEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHhhhcccceeEEE
Confidence            888  35567889999999975   6688999999999999999999999999999999985  79999986

>PRK11903 aldehyde dehydrogenase; Provisional

Probab=98.94  E-value=1.1e-09  Score=113.87  Aligned_cols=127  Identities=13%  Similarity=0.207  Sum_probs=99.0

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc----------------
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN----------------  368 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~----------------  368 (442)
                      |..|......||+..++++|...+....+++           +||+++-..++.+.+.++.+..                
T Consensus       293 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~~~~ga~vl~gg~~~~~~~~  372 (521)
T PRK11903        293 GQKCTAIRRIFVPEALYDAVAEALAARLAKTTVGNPRNDGVRMGPLVSRAQLAAVRAGLAALRAQAEVLFDGGGFALVDA  372 (521)
T ss_pred             CCCccCCeEEEEehhHHHHHHHHHHHHHHhccCCCCCCCcCccCCCCCHHHHHHHHHHHHHHhcCCEEEECCccCCCCCC
Confidence            3334344557999999988887765444443           6899888888888888875421                


Q ss_pred             ---CCCCceEEEecCC-CChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccc--ccc
Q psy5844         369 ---SDYGLAAAVFTKD-LDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL--RAG  439 (442)
Q Consensus       369 ---~~~gl~~~v~s~d-~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l--~~G  439 (442)
                         .++.+.++|+..+ .+..+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.+++++|  ++|
T Consensus       373 ~~~~g~~~~PTvl~~~~~~~~~~i~~eE~FGPvl~V~~~~~~~eai~~~N~~~~gL~asvft~d~~~~~~~~~~l~~~~G  452 (521)
T PRK11903        373 DPAVAACVGPTLLGASDPDAATAVHDVEVFGPVATLLPYRDAAHALALARRGQGSLVASVYSDDAAFLAAAALELADSHG  452 (521)
T ss_pred             CCCCCeEEcCEEEeccCCCccchHHhCcccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHHHHHhCC
Confidence               1345688998743 3345678899999975   668999999999999999999999999999999999999  899


Q ss_pred             ccC
Q psy5844         440 TVW  442 (442)
Q Consensus       440 ~v~  442 (442)
                      +||
T Consensus       453 ~V~  455 (521)
T PRK11903        453 RVH  455 (521)
T ss_pred             EEE
Confidence            986

>PRK09407 gabD2 succinic semialdehyde dehydrogenase; Reviewed

Probab=98.94  E-value=9.1e-10  Score=115.03  Aligned_cols=126  Identities=21%  Similarity=0.333  Sum_probs=100.1

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc---------------C
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN---------------S  369 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~---------------~  369 (442)
                      |..|...+..+||..++++|...+....+++           +||++....++.+++.++.+..               .
T Consensus       292 GQ~C~a~~rv~V~~~v~d~f~~~L~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~vl~gG~~~~~~~  371 (524)
T PRK09407        292 GQLCISIERIYVHESIYDEFVRAFVAAVRAMRLGAGYDYSADMGSLISEAQLETVSAHVDDAVAKGATVLAGGKARPDLG  371 (524)
T ss_pred             CCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCcCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCC
Confidence            3334444557899999888877665544443           6899988888888888876522               1


Q ss_pred             CCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         370 DYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       370 ~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++.+.++|+. |....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       372 g~~~~Ptvl~-~v~~~~~i~~eE~FGPvl~v~~~~~~deai~~~N~~~~gLsa~V~t~d~~~a~~~~~~l~~G~v~  446 (524)
T PRK09407        372 PLFYEPTVLT-GVTPDMELAREETFGPVVSVYPVADVDEAVERANDTPYGLNASVWTGDTARGRAIAARIRAGTVN  446 (524)
T ss_pred             CceEeCEEEe-CCCCCChHHhCCCCCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            2345678887 55667889999999975   668899999999999999999999999999999999999999985

>cd07146 ALDH_PhpJ Streptomyces putative phosphonoformaldehyde dehydrogenase PhpJ-like

Probab=98.94  E-value=1.1e-09  Score=112.58  Aligned_cols=119  Identities=25%  Similarity=0.289  Sum_probs=93.3

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------CCCCceEEEecC
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFTK  380 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s~  380 (442)
                      ...+|+..++++|...+....++           .+||++.-..++.+++.++.+..           .++.+.++|++ 
T Consensus       265 ~rv~V~~~i~d~f~~~l~~~~~~l~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~vl~gg~~~g~~~~Ptvl~-  343 (451)
T cd07146         265 KRILVHESVADEFVDLLVEKSAALVVGDPMDPATDMGTVIDEEAAIQIENRVEEAIAQGARVLLGNQRQGALYAPTVLD-  343 (451)
T ss_pred             ceEEEchHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCEEEcCEEee-
Confidence            44677777777666655443333           25788887778888887776532           13445678887 


Q ss_pred             CCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         381 DLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       381 d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       344 ~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~  408 (451)
T cd07146         344 HVPPDAELVTEETFGPVAPVIRVKDLDEAIAISNSTAYGLSSGVCTNDLDTIKRLVERLDVGTVN  408 (451)
T ss_pred             cCCCCCHHHhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHCCcceEE
Confidence            55566789999999975   668999999999999999999999999999999999999999885

Putative phosphonoformaldehyde dehydrogenase (PhpJ), an aldehyde dehydrogenase homolog reportedly involved in the biosynthesis of phosphinothricin tripeptides in Streptomyces viridochromogenes DSM 40736, and similar sequences are included in this CD.

>PTZ00381 aldehyde dehydrogenase family protein; Provisional

Probab=98.93  E-value=8.2e-10  Score=114.22  Aligned_cols=120  Identities=18%  Similarity=0.241  Sum_probs=94.7

Q ss_pred             CCCcccccceeccCcchhHHHHHhh----------cCCcccccccCCHHHHHHHH----------hcCCCCceEEEecCC
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREEI----------FGPVQQLIRFSSIEEVIERA----------NNSDYGLAAAVFTKD  381 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e~----------fgPvl~v~~~~~~~eai~~a----------n~~~~gl~~~v~s~d  381 (442)
                      .+..+|+..+++.+...+....+++          +||++....++++.+.++..          +..++.+.++|++ +
T Consensus       252 ~~~vlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~ri~~~i~~~ga~~~~gG~~~~~~~~i~Ptvl~-~  330 (493)
T PTZ00381        252 PDYVLVHRSIKDKFIEALKEAIKEFFGEDPKKSEDYSRIVNEFHTKRLAELIKDHGGKVVYGGEVDIENKYVAPTIIV-N  330 (493)
T ss_pred             CCEEEEeHHHHHHHHHHHHHHHHHHhCCCCccCCCcCCCCCHHHHHHHHHHHHhCCCcEEECCCcCCCCCeEeeEEEe-c
Confidence            3446888888877776665444443          57788877777777777421          1123456788887 6


Q ss_pred             CChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         382 LDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       382 ~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+..+.+++++.||+|   ..+++.+|+++.+|+++|||++|+||+|...+.++++++++|+||
T Consensus       331 v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~~n~~~~gLa~~vft~d~~~~~~~~~~~~sG~v~  394 (493)
T PTZ00381        331 PDLDSPLMQEEIFGPILPILTYENIDEVLEFINSRPKPLALYYFGEDKRHKELVLENTSSGAVV  394 (493)
T ss_pred             CCCCChHHhccccCCeEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            6777899999999975   668999999999999999999999999999999999999999985

>TIGR01236 D1pyr5carbox1 delta-1-pyrroline-5-carboxylate dehydrogenase, group 1

Probab=98.93  E-value=1.2e-09  Score=114.19  Aligned_cols=124  Identities=25%  Similarity=0.382  Sum_probs=96.8

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhcC----------------C
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANNS----------------D  370 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~~----------------~  370 (442)
                      .|......||+..|+++|...+....+.+           +||++.-..++.+.+.++.+...                +
T Consensus       317 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~~G~p~d~~t~~Gpli~~~~~~~v~~~i~~a~~~Ga~a~vl~GG~~~~~~G  396 (533)
T TIGR01236       317 KCSAASRLYVPHSVWPRFKDELLAELAEVKVGDPDDFSNFMGAVIDERSFVKNVKYIERAKGDPAELTILYGGKYDDSEG  396 (533)
T ss_pred             CCcCCeeEEEchhHHHHHHHHHHHHHhcCCcCCCCCCCCcccccCCHHHHHHHHHHHHHHHhcCCceEEEeCCCcCCCCC
Confidence            33334557888888888877665544332           78999888888887777765321                3


Q ss_pred             CCceEEEecCCCChhhhhccccEeeeE---EeeCC--HHHHHHhh-ccCCccceeEEeccChhHHHHHHcccc--ccccC
Q psy5844         371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSS--IEEVIERA-NNSDYGLAAAVFTKDLDKTNYVTQGLR--AGTVW  442 (442)
Q Consensus       371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~--~~~av~~a-n~~~yGl~~~vft~d~~~~~~~~~~l~--~G~v~  442 (442)
                      +.+.++|+. +.+..+.+++++.||+|   +.+++  .+|+++.+ |+++|||++||||+|..++.+++++|+  +|+||
T Consensus       397 ~~~~PTvl~-~~~~d~~i~~eE~FGPVl~v~~~~~~~~~eai~~~~n~~~~gL~a~Vft~d~~~a~~~~~~l~~~~G~v~  475 (533)
T TIGR01236       397 YFVEPTVIL-SKDPTDPLMVEEIFGPVLTVYVYPDDKYKEILDVVDSTSRYGLTGAVFAKDRQAILEADKRLRFAAGNFY  475 (533)
T ss_pred             eEEeeEEEe-cCCCCChhhcccCCCCeEEEEEeCCCCHHHHHHHHhcCCCcCceEEEEeCCHHHHHHHHHHhhhcCcEEE
Confidence            456788887 55567899999999976   55666  49999999 899999999999999999999999977  99986

This model represents one of two related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. The two branches are not as closely related to each other as some aldehyde dehydrogenases are to this branch, and separate models are built for this reason. The enzyme is the second of two in the degradation of proline to glutamate.

>PRK09847 gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase; Provisional

Probab=98.93  E-value=1e-09  Score=113.90  Aligned_cols=126  Identities=23%  Similarity=0.409  Sum_probs=99.7

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------CCCC
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------SDYG  372 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------~~~g  372 (442)
                      |..|...+..+|+..++++|.+.+....+++           +||++.-..++.+++.++.+..            .++.
T Consensus       299 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~G~i~~gg~~~~~~~~  378 (494)
T PRK09847        299 GQVCIAGTRLLLEESIADEFLALLKQQAQNWQPGHPLDPATTMGTLIDCAHADSVHSFIREGESKGQLLLDGRNAGLAAA  378 (494)
T ss_pred             CCCCCCCcEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCeEEECCccCCCCce
Confidence            3334444557889999888877765544443           5788888888888888876521            1233


Q ss_pred             ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.++++. +.+..+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       379 ~~Ptvl~-~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~a~~~~~~l~~G~v~  450 (494)
T PRK09847        379 IGPTIFV-DVDPNASLSREEIFGPVLVVTRFTSEEQALQLANDSQYGLGAAVWTRDLSRAHRMSRRLKAGSVF  450 (494)
T ss_pred             EeeEEEe-CCCCCChHHhCcCcCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            5678876 66677889999999975   668999999999999999999999999999999999999999985

>cd07120 ALDH_PsfA-ACA09737 Pseudomonas putida aldehyde dehydrogenase PsfA (ACA09737)-like

Probab=98.93  E-value=7.9e-10  Score=113.54  Aligned_cols=121  Identities=29%  Similarity=0.454  Sum_probs=95.8

Q ss_pred             CCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc-----------------CCCC
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN-----------------SDYG  372 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~-----------------~~~g  372 (442)
                      .....||+..++++|...+....+++           +||+++-..++.+++.++.+..                 .++.
T Consensus       263 a~~rv~V~~~i~~~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~~~~g~~~~~~~~~g~~  342 (455)
T cd07120         263 AGSRVLVQRSIADEVRDRLAARLAAVKVGPGLDPASDMGPLIDRANVDRVDRMVERAIAAGAEVVLRGGPVTEGLAKGAF  342 (455)
T ss_pred             CCeEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCCcCCccCHHHHHHHHHHHHHHHHCCCEEEeCCccCcccCCCCce
Confidence            33456888888887776665444443           6888888888888888876521                 1234


Q ss_pred             ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.++|+. +....+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       343 ~~Ptvl~-~~~~d~~i~~~E~FgPvl~v~~~~~~deai~~~n~~~~gLs~~ift~d~~~a~~~~~~l~~G~v~  414 (455)
T cd07120         343 LRPTLLE-VDDPDADIVQEEIFGPVLTLETFDDEAEAVALANDTDYGLAASVWTRDLARAMRVARAIRAGTVW  414 (455)
T ss_pred             ECCEEEe-cCCCCChhhhCcCcCceEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEE
Confidence            5678887 55667788999999975   668899999999999999999999999999999999999999985

Included in this CD is the aldehyde dehydrogenase (PsfA, locus ACA09737) of Pseudomonas putida involved in furoic acid metabolism. Transcription of psfA was induced in response to 2-furoic acid, furfuryl alcohol, and furfural.

>cd07097 ALDH_KGSADH-YcbD Bacillus subtilis NADP+-dependent alpha-ketoglutaric semialdehyde dehydrogenase ycbD-like

Probab=98.93  E-value=1e-09  Score=113.53  Aligned_cols=124  Identities=21%  Similarity=0.329  Sum_probs=98.4

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc----------------CC
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN----------------SD  370 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~----------------~~  370 (442)
                      .|......||+..++++|...+....+++           +||++.-..++.+.+.++.+..                .+
T Consensus       277 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g  356 (473)
T cd07097         277 RCTASSRLIVTEGIHDRFVEALVERTKALKVGDALDEGVDIGPVVSERQLEKDLRYIEIARSEGAKLVYGGERLKRPDEG  356 (473)
T ss_pred             CCcCCeeEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCC
Confidence            34344557888888888777665444332           5889888888888888876531                12


Q ss_pred             CCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+.++|+. +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       357 ~~~~Ptvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~  430 (473)
T cd07097         357 YYLAPALFA-GVTNDMRIAREEIFGPVAAVIRVRDYDEALAIANDTEFGLSAGIVTTSLKHATHFKRRVEAGVVM  430 (473)
T ss_pred             eEEeeEEec-cCCCCChhhhCCCcCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEE
Confidence            446788887 55667889999999975   668899999999999999999999999999999999999999985

Kinetic studies of the Bacillus subtilis ALDH-like ycbD protein, which is involved in d-glucarate/d-galactarate utilization, reveal that it is a NADP+-dependent, alpha-ketoglutaric semialdehyde dehydrogenase (KGSADH). KGSADHs (EC 1.2.1.26) catalyze the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. Interestingly, the NADP+-dependent, tetrameric, 2,5-dioxopentanoate dehydrogenase (EC=1.2.1.26), an enzyme involved in the catabolic pathway for D-arabinose in Sulfolobus solfataricus, also clusters in this group. This CD shows a distant phylogenetic relationship to the Azospirillum brasilense KGSADH-II (-III) group.

>TIGR01237 D1pyr5carbox2 delta-1-pyrroline-5-carboxylate dehydrogenase, group 2, putative

Probab=98.93  E-value=1.3e-09  Score=113.58  Aligned_cols=119  Identities=24%  Similarity=0.439  Sum_probs=93.5

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc-------------CCCCceEEEe
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN-------------SDYGLAAAVF  378 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~-------------~~~gl~~~v~  378 (442)
                      ...||+..+++.|...+....+++           +||++.-..++.+.+.++.+..             .++.+.++|+
T Consensus       320 ~rv~V~~~i~d~f~~~L~~~~~~l~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~g~~l~gg~~~~~~g~~~~Ptvl  399 (511)
T TIGR01237       320 SRVVVLSPVYDAVVERFVEATRSLNVGPTDDPSTQVGPVIDQKSQAKIQEYIEQGKAEGELAIGGCDAPSEGYFIGPTIF  399 (511)
T ss_pred             eEEEEehhHHHHHHHHHHHHHHhCCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCcEEECCccCCCCCeEEcCEEE
Confidence            446778888777766654433332           5788877777777777776421             1234677888


Q ss_pred             cCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         379 TKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       379 s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      . +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       400 ~-~~~~~~~i~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~  465 (511)
T TIGR01237       400 K-DVDRHARLAQEEIFGPVVAIIRAADFDEALEIANGTEYGLTGGVYSNTRDHIERAAAEFEVGNLY  465 (511)
T ss_pred             e-CCCCCChHhhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEE
Confidence            6 66777889999999975   668999999999999999999999999999999999999999985

This enzyme is the second of two in the degradation of proline to glutamate. This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch may be associated with proline dehydrogenase (the other enzyme of the pathway from proline to glutamate) but have not been demonstrated experimentally. The branches are not as closely related to each other as some distinct aldehyde dehydrogenases are to some; separate models were built to let each model describe a set of equivalogs.

>cd07099 ALDH_DDALDH Methylomonas sp

Probab=98.93  E-value=1.3e-09  Score=112.10  Aligned_cols=124  Identities=23%  Similarity=0.360  Sum_probs=98.5

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCC
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYG  372 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~g  372 (442)
                      .+...+..+||..++++|...+....+++           +||+++-..++.+.+.++.+..              .++.
T Consensus       259 ~C~a~~ri~V~~~i~d~f~~~l~~~~~~l~~G~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~g~~  338 (453)
T cd07099         259 TCISVERVYVHESVYDEFVARLVAKARALRPGADDIGDADIGPMTTARQLDIVRRHVDDAVAKGAKALTGGARSNGGGPF  338 (453)
T ss_pred             CCCCCcEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCeE
Confidence            33334557888888888877665544433           6888888888888888776521              2345


Q ss_pred             ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.++|++ +....+.+++++.||+|   ..+++.+|+++.+|+++|||++|+||+|..+++++++++++|.||
T Consensus       339 ~~Ptil~-~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~  410 (453)
T cd07099         339 YEPTVLT-DVPHDMDVMREETFGPVLPVMPVADEDEAIALANDSRYGLSASVFSRDLARAEAIARRLEAGAVS  410 (453)
T ss_pred             EecEEEe-cCCCCCHHHhCCCcCCeeEEEeeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEE
Confidence            6778887 55667889999999975   668899999999999999999999999999999999999999986

4,4'-diapolycopene-dialdehyde dehydrogenase-like. The 4,4'-diapolycopene-dialdehyde dehydrogenase (DDALDH) involved in C30 carotenoid synthesis in Methylomonas sp. strain 16a and other similar sequences are present in this CD. DDALDH converts 4,4'-diapolycopene-dialdehyde into 4,4'-diapolycopene-diacid.

>TIGR01804 BADH glycine betaine aldehyde dehydrogenase

Probab=98.93  E-value=1.3e-09  Score=112.48  Aligned_cols=123  Identities=31%  Similarity=0.501  Sum_probs=97.8

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------------C
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------------S  369 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------------~  369 (442)
                      +......+|+..++++|...+....+++           +||+++...++.+.+.++.+..                  .
T Consensus       276 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~~~~~  355 (467)
T TIGR01804       276 CSNGTRVFVHNKIKEKFEARLVERTKRIKLGDGFDEATEMGPLISAEHRDKVESYIEKGKEEGATLACGGKRPEREGLQN  355 (467)
T ss_pred             CCCCCEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCccCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCC
Confidence            3333456888888888777665544443           6888888888888887776411                  1


Q ss_pred             CCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         370 DYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       370 ~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++.+.++|+. +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       356 g~~~~Ptvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~G~v~  430 (467)
T TIGR01804       356 GFFIEPTVFT-DCTDDMTIVREEIFGPVMTVLTFSSEDEVIARANDTIYGLAAGVFTADLGRAHRVANQLKAGTVW  430 (467)
T ss_pred             CeEEeeEEEe-CCCCCChHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            3456788887 56677899999999975   678899999999999999999999999999999999999999985

Betaine aldehyde dehydrogenase is a member of the aldehyde dehydrogenase family (pfam00171).

>cd07086 ALDH_F7_AASADH-like NAD+-dependent alpha-aminoadipic semialdehyde dehydrogenase and related proteins

Probab=98.92  E-value=1.5e-09  Score=112.26  Aligned_cols=120  Identities=21%  Similarity=0.307  Sum_probs=95.8

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc----------------CCCCce
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN----------------SDYGLA  374 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~----------------~~~gl~  374 (442)
                      ....+|+..+++.|...+....++           .+||++.-..++.+.+.++.+..                .++.+.
T Consensus       282 ~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~~~g~~~~  361 (478)
T cd07086         282 TRRLIVHESVYDEFLERLVKAYKQVRIGDPLDEGTLVGPLINQAAVEKYLNAIEIAKSQGGTVLTGGKRIDGGEPGNYVE  361 (478)
T ss_pred             CeEEEEcHHHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEc
Confidence            344678888887777666544433           26888888888888888876631                133456


Q ss_pred             EEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHcc--ccccccC
Q psy5844         375 AAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQG--LRAGTVW  442 (442)
Q Consensus       375 ~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~--l~~G~v~  442 (442)
                      ++|++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++++++++  +++|+||
T Consensus       362 Ptvl~-~~~~~~~~~~eE~FgPVl~v~~~~~~deai~~~n~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~v~  433 (478)
T cd07086         362 PTIVT-GVTDDARIVQEETFAPILYVIKFDSLEEAIAINNDVPQGLSSSIFTEDLREAFRWLGPKGSDCGIVN  433 (478)
T ss_pred             cEEec-CCCCCChhhcCCCcCCEEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHhcCcccceeEE
Confidence            78886 55667889999999975   66899999999999999999999999999999999999  9999986

ALDH subfamily which includes the NAD+-dependent, alpha-aminoadipic semialdehyde dehydrogenase (AASADH, EC=1.2.1.31), also known as Antiquitin-1, ALDH7A1, ALDH7B or delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH), and other similar sequences, such as the uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105).

>cd07143 ALDH_AldA_AN0554 Aspergillus nidulans aldehyde dehydrogenase, AldA (AN0554)-like

Probab=98.92  E-value=1.2e-09  Score=113.14  Aligned_cols=126  Identities=33%  Similarity=0.546  Sum_probs=99.9

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CC
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SD  370 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~  370 (442)
                      |..|......+|+..++++|...+....+++           +||++.-..++.+++.++.+..              .+
T Consensus       285 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~g  364 (481)
T cd07143         285 GQVCCAGSRIYVQEGIYDKFVKRFKEKAKKLKVGDPFAEDTFQGPQVSQIQYERIMSYIESGKAEGATVETGGKRHGNEG  364 (481)
T ss_pred             CCCCCCCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCc
Confidence            3344444557889999888877765544443           5888888888888888876521              13


Q ss_pred             CCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+.++|+. +.+..+.+.+++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       365 ~~~~Ptvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~  438 (481)
T cd07143         365 YFIEPTIFT-DVTEDMKIVKEEIFGPVVAVIKFKTEEEAIKRANDSTYGLAAAVFTNNINNAIRVANALKAGTVW  438 (481)
T ss_pred             eEEeeEEEe-cCCCCChhhhcCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCeEE
Confidence            346788887 55667889999999975   668899999999999999999999999999999999999999985

NAD(P)+-dependent aldehyde dehydrogenase (AldA) of Aspergillus nidulans (locus AN0554), and other similar sequences, are present in this CD.

>cd07135 ALDH_F14-YMR110C Saccharomyces cerevisiae aldehyde dehydrogenase family 14 and related proteins

Probab=98.92  E-value=2e-09  Score=109.98  Aligned_cols=119  Identities=18%  Similarity=0.335  Sum_probs=93.6

Q ss_pred             CCcccccceeccCcchhHHHHHhh----------cCCcccccccCCHHHHHHHHh----------cCCCCceEEEecCCC
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI----------FGPVQQLIRFSSIEEVIERAN----------NSDYGLAAAVFTKDL  382 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~----------fgPvl~v~~~~~~~eai~~an----------~~~~gl~~~v~s~d~  382 (442)
                      ...+||..++++|...+....+.+          +||++....++.+.+.++.+.          ..++.+.++++. +.
T Consensus       252 ~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~i~~~v~~ag~~v~~gg~~~~~g~~~~Ptvl~-~~  330 (436)
T cd07135         252 DYVLVDPSVYDEFVEELKKVLDEFYPGGANASPDYTRIVNPRHFNRLKSLLDTTKGKVVIGGEMDEATRFIPPTIVS-DV  330 (436)
T ss_pred             CEEeccHHHHHHHHHHHHHHHHHhcCCCCCCCCCcCCCCCHHHHHHHHHHHHhcCCeEEECCCcCCCCCEEccEEEe-cC
Confidence            345788888877776655443332          578888777777777776531          124556788887 55


Q ss_pred             ChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         383 DKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       383 ~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +..+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.+++++|++|.||
T Consensus       331 ~~~~~~~~~E~FgPvl~v~~~~~~deai~~an~~~~gL~~~v~t~d~~~a~~~~~~l~~g~v~  393 (436)
T cd07135         331 SWDDSLMSEELFGPVLPIIKVDDLDEAIKVINSRDTPLALYIFTDDKSEIDHILTRTRSGGVV  393 (436)
T ss_pred             CCccHHHhccccCCceEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHhcCCcCeEE
Confidence            567788999999965   668899999999999999999999999999999999999999985

Aldehyde dehydrogenase family 14 (ALDH14), isolated mainly from the mitochondrial outer membrane of Saccharomyces cerevisiae (YMR110C) and most closely related to the plant and animal ALDHs and fatty ALDHs family 3 members, and similar fungal sequences, are present in this CD.

>cd07147 ALDH_F21_RNP123 Aldehyde dehydrogenase family 21A1-like

Probab=98.92  E-value=1e-09  Score=112.92  Aligned_cols=121  Identities=21%  Similarity=0.299  Sum_probs=96.1

Q ss_pred             CCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhcC-----------CCCceEEEe
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANNS-----------DYGLAAAVF  378 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~~-----------~~gl~~~v~  378 (442)
                      ..+..+||..++++|...+.....+           .+||++.-..++.+.+.++.+...           ++.+.++++
T Consensus       265 a~~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~l~gg~~~g~~~~Ptvl  344 (452)
T cd07147         265 SVQRVLVHRSVYDEFKSRLVARVKALKTGDPKDDATDVGPMISESEAERVEGWVNEAVDAGAKLLTGGKRDGALLEPTIL  344 (452)
T ss_pred             CCcEEEEchhHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCEEEcCEEE
Confidence            3345688888888777666443333           368888888888888888766321           234567888


Q ss_pred             cCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         379 TKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       379 s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      + +.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       345 ~-~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~a~~~~~~~~~G~v~  410 (452)
T cd07147         345 E-DVPPDMEVNCEEVFGPVVTVEPYDDFDEALAAVNDSKFGLQAGVFTRDLEKALRAWDELEVGGVV  410 (452)
T ss_pred             e-CCCCCChHHhCcCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHcCcceEE
Confidence            7 55567889999999975   668899999999999999999999999999999999999999985

Aldehyde dehydrogenase ALDH21A1 (gene name RNP123) was first described in the moss Tortula ruralis and is believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and ALDH21A1 expression represents a unique stress tolerance mechanism. So far, of plants, only the bryophyte sequence has been observed, but similar protein sequences from bacteria and archaea are also present in this CD.

>TIGR03240 arg_catab_astD succinylglutamic semialdehyde dehydrogenase

Probab=98.91  E-value=2e-09  Score=111.61  Aligned_cols=118  Identities=20%  Similarity=0.265  Sum_probs=90.5

Q ss_pred             CCccccccee-ccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhcC--------------CCCceE
Q psy5844         323 KGFYVQPTVF-ANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANNS--------------DYGLAA  375 (442)
Q Consensus       323 ~g~~v~pti~-~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~~--------------~~gl~~  375 (442)
                      ...|||..++ +++...+....+.            .+||+++-..++.+.+.++.+...              ++.+.+
T Consensus       279 ~rv~V~~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~i~P  358 (484)
T TIGR03240       279 RRLLVPDGAQGDAFLARLVEVAERLTVGAWDAEPQPFMGAVISLQAAQRLLAAQAKLLALGGKSLLAMRQLDPGAALLTP  358 (484)
T ss_pred             cEEEEeccccHHHHHHHHHHHHHhcccCCCCcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCEEEcC
Confidence            4467777774 6666555432221            368888888888887777655321              234566


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|+  +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..+++++++++++|+||
T Consensus       359 Tvl--~v~~~~~i~~eE~FGPVl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~aG~v~  426 (484)
T TIGR03240       359 GII--DVTGVAELPDEEHFGPLLQVIRYDDFDEAIAIANNTRFGLSAGLLSDDRELYDRFLLEIRAGIVN  426 (484)
T ss_pred             EEE--ccCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            777  35556789999999975   668899999999999999999999999999999999999999985

Members of this protein family are succinylglutamic semialdehyde dehydrogenase (EC 1.2.1.71), the fourth enzyme in the arginine succinyltransferase (AST) pathway for arginine catabolism.

>cd07138 ALDH_CddD_SSP0762 Rhodococcus ruber 6-oxolauric acid dehydrogenase-like

Probab=98.91  E-value=1.7e-09  Score=111.66  Aligned_cols=121  Identities=25%  Similarity=0.422  Sum_probs=95.8

Q ss_pred             CCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------------CCCC
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------------SDYG  372 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------------~~~g  372 (442)
                      .....+|+..++++|...+....+.           .+||++.-..++.+.+.++.+..                 .++.
T Consensus       275 a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~v~~a~~~Ga~~l~gg~~~~~~~~~g~~  354 (466)
T cd07138         275 APTRMLVPRSRYAEAEEIAAAAAEAYVVGDPRDPATTLGPLASAAQFDRVQGYIQKGIEEGARLVAGGPGRPEGLERGYF  354 (466)
T ss_pred             CCcEEEEeHhHHHHHHHHHHHHHHhcCCCCCCCCCCcCCccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCcCCCCce
Confidence            3345688888888777665544333           26888888888888888876521                 1344


Q ss_pred             ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.++|+. +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       355 ~~Ptvl~-~~~~~~~i~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~a~~~~~~l~~G~v~  426 (466)
T cd07138         355 VKPTVFA-DVTPDMTIAREEIFGPVLSIIPYDDEDEAIAIANDTPYGLAGYVWSADPERARAVARRLRAGQVH  426 (466)
T ss_pred             ECCEEec-CCCCCChHHhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcceEE
Confidence            6678876 55566889999999975   668899999999999999999999999999999999999999885

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid, and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and other similar sequences, are included in this CD.

>cd07131 ALDH_AldH-CAJ73105 Uncharacterized Candidatus kuenenia aldehyde dehydrogenase AldH (CAJ73105)-like

Probab=98.91  E-value=1.7e-09  Score=111.99  Aligned_cols=120  Identities=26%  Similarity=0.415  Sum_probs=94.4

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc------------------CCCC
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN------------------SDYG  372 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~------------------~~~g  372 (442)
                      ....||+..+++++...+....++           .+||+++-..++.+.+.++.+..                  .++.
T Consensus       281 ~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~  360 (478)
T cd07131         281 TSRLIVHESVYDEFLKRFVERAKRLRVGDGLDEETDMGPLINEAQLEKVLNYNEIGKEEGATLLLGGERLTGGGYEKGYF  360 (478)
T ss_pred             CeEEEEehhhHHHHHHHHHHHHHhcCCCCCCCCCCcCCcCCCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCce
Confidence            345678888877776665443333           26888888888888888776531                  1334


Q ss_pred             ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.++|+. +....+.+.+++.||+|   ..+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       361 ~~Ptvl~-~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~a~~~~~~l~~G~v~  432 (478)
T cd07131         361 VEPTVFT-DVTPDMRIAQEEIFGPVVALIEVSSLEEAIEIANDTEYGLSSAIYTEDVNKAFRARRDLEAGITY  432 (478)
T ss_pred             ECCEEEe-CCCCCChHhhCCCcCCeEEEEEeCCHHHHHHHHhCCCCcceEEEEcCCHHHHHHHHHhcCccEEE
Confidence            6678887 44557788999999975   668899999999999999999999999999999999999999985

Uncharacterized aldehyde dehydrogenase of Candidatus kuenenia AldH (locus CAJ73105) and similar sequences with similarity to alpha-aminoadipic semialdehyde dehydrogenase (AASADH, human ALDH7A1, EC=1.2.1.31), Arabidopsis ALDH7B4, and Streptomyces clavuligerus delta-1-piperideine-6-carboxylate dehydrogenase (P6CDH) are included in this CD.

>cd07100 ALDH_SSADH1_GabD1 Mycobacterium tuberculosis succinate-semialdehyde dehydrogenase 1-like

Probab=98.91  E-value=1.6e-09  Score=110.68  Aligned_cols=123  Identities=27%  Similarity=0.351  Sum_probs=95.7

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCc
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGL  373 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl  373 (442)
                      +...+..||+..++++|...+....+.           .+||++.-..++.+++.++.+..              .++.+
T Consensus       238 C~a~~rv~v~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~  317 (429)
T cd07100         238 CIAAKRFIVHEDVYDEFLEKFVEAMAALKVGDPMDEDTDLGPLARKDLRDELHEQVEEAVAAGATLLLGGKRPDGPGAFY  317 (429)
T ss_pred             CCCCeEEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCeEE
Confidence            333345688888888777666544333           25888888888888877765421              13446


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++++. +....+.+++++.||+|   ..+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       318 ~Ptv~~-~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~  388 (429)
T cd07100         318 PPTVLT-DVTPGMPAYDEELFGPVAAVIKVKDEEEAIALANDSPFGLGGSVFTTDLERAERVARRLEAGMVF  388 (429)
T ss_pred             cCEEee-cCCCCCHHHhCCCCCCeEEEeeeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhCCcCeEE
Confidence            678887 55556888999999975   668899999999999999999999999999999999999999985

Succinate-semialdehyde dehydrogenase 1 (SSADH1, GabD1, EC=1.2.1.16) catalyzes the NADP(+)-dependent oxidation of succinate semialdehyde (SSA) to succinate. SSADH activity in Mycobacterium tuberculosis (Mtb) is encoded by both gabD1 (Rv0234c) and gabD2 (Rv1731). The Mtb GabD1 SSADH1 reportedly is an enzyme of the gamma-aminobutyrate shunt, which forms a functional link between two TCA half-cycles by converting alpha-ketoglutarate to succinate.

>cd07124 ALDH_PutA-P5CDH-RocA Delta(1)-pyrroline-5-carboxylate dehydrogenase, RocA

Probab=98.91  E-value=1.8e-09  Score=112.67  Aligned_cols=119  Identities=20%  Similarity=0.382  Sum_probs=95.0

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCCCceEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAAA  376 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~  376 (442)
                      +..+|+..+++.|...+....++           .+||+++-..++.+.+.++.+..               .++.+.++
T Consensus       319 ~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~g~~vl~gG~~~~~~~~g~~~~Pt  398 (512)
T cd07124         319 SRVIVHESVYDEFLERLVERTKALKVGDPEDPEVYMGPVIDKGARDRIRRYIEIGKSEGRLLLGGEVLELAAEGYFVQPT  398 (512)
T ss_pred             eEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCcccCCcCHHHHHHHHHHHHHHHhCCEEEecCccCCCCCCCceEcCE
Confidence            44688888887777666544433           36888888888888877775421               24456788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       399 vl~-~v~~~~~i~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~  466 (512)
T cd07124         399 IFA-DVPPDHRLAQEEIFGPVLAVIKAKDFDEALEIANDTEYGLTGGVFSRSPEHLERARREFEVGNLY  466 (512)
T ss_pred             EEe-cCCCCChHHhCCCcCCeEEEEecCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCcceEE
Confidence            887 55667889999999975   668899999999999999999999999999999999999999986

Delta(1)-pyrroline-5-carboxylate dehydrogenase (EC=1.5.1.12 ), RocA: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. The proline catabolic enzymes, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). In this CD, monofunctional enzyme sequences such as seen in the Bacillus subtilis RocA P5CDH are also present. These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis.

>cd07105 ALDH_SaliADH Salicylaldehyde dehydrogenase, DoxF-like

Probab=98.91  E-value=2e-09  Score=110.14  Aligned_cols=123  Identities=24%  Similarity=0.399  Sum_probs=98.8

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhh------cCCcccccccCCHHHHHHHHhc---------------CCCCceEEE
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEI------FGPVQQLIRFSSIEEVIERANN---------------SDYGLAAAV  377 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~------fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~v  377 (442)
                      +......||+..+++++.+.+.....++      +||+++...++.+.+.++.+..               .++.+.+++
T Consensus       244 C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~~~gg~~~~~~~~~~~~Ptv  323 (432)
T cd07105         244 CMSTERIIVHESIADEFVEKLKAAAEKLFAGPVVLGSLVSAAAADRVKELVDDALSKGAKLVVGGLADESPSGTSMPPTI  323 (432)
T ss_pred             CcCCceEEEcHHHHHHHHHHHHHHHHhhcCCCCcccccCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCeEEeeEE
Confidence            3334557899999988877765554443      5899998888888888876521               133457888


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       324 l~-~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~  390 (432)
T cd07105         324 LD-NVTPDMDIYSEESFGPVVSIIRVKDEEEAVRIANDSEYGLSAAVFTRDLARALAVAKRIESGAVH  390 (432)
T ss_pred             Ee-cCCCCCHHHhCCCcCCeEEEEeeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEE
Confidence            87 55566888999999965   678999999999999999999999999999999999999999985

Salicylaldehyde dehydrogenase (DoxF, SaliADH, EC=1.2.1.65) involved in the upper naphthalene catabolic pathway of Pseudomonas strain C18 and other similar sequences are present in this CD.

>cd07118 ALDH_SNDH Gluconobacter oxydans L-sorbosone dehydrogenase-like

Probab=98.91  E-value=1.2e-09  Score=112.43  Aligned_cols=124  Identities=22%  Similarity=0.401  Sum_probs=98.2

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCC
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDY  371 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~  371 (442)
                      .+......+|+..+++.|...+....++           .+||++.-..++.+.+.++.+..               .++
T Consensus       261 ~C~a~~rv~V~~~i~d~f~~~L~~~~~~l~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~g~  340 (454)
T cd07118         261 CCNSGSRLLVHESIADAFVAAVVARSRKVRVGDPLDPETKVGAIINEAQLAKITDYVDAGRAEGATLLLGGERLASAAGL  340 (454)
T ss_pred             CCCCCceEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCe
Confidence            3434455788888888777666544333           37888888888888888876522               234


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|+. +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       341 ~~~Ptvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~  413 (454)
T cd07118         341 FYQPTIFT-DVTPDMAIAREEIFGPVLSVLTFDTVDEAIALANDTVYGLSAGVWSKDIDTALTVARRIRAGTVW  413 (454)
T ss_pred             EEeCEEEe-CCCCCCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCccceEEEECCCHHHHHHHHHhcCcCEEE
Confidence            56778887 55667788999999975   668899999999999999999999999999999999999999985

Included in this CD is the L-sorbosone dehydrogenase (SNDH) from Gluconobacter oxydans UV10. In G. oxydans, D-sorbitol is converted to 2-keto-L-gulonate (a precursor of L-ascorbic acid) in sequential oxidation steps catalyzed by a FAD-dependent, L-sorbose dehydrogenase and an NAD(P)+-dependent, L-sorbosone dehydrogenase.

>cd07150 ALDH_VaniDH_like Pseudomonas putida vanillin dehydrogenase-like

Probab=98.91  E-value=1.8e-09  Score=111.14  Aligned_cols=121  Identities=23%  Similarity=0.357  Sum_probs=95.4

Q ss_pred             CCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------CCCCceEEEe
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVF  378 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~  378 (442)
                      ..+..+||..+++++...+....++           .+||++.-..++.+.+.++.+..           .++.+.++|+
T Consensus       264 a~~rv~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~vl~gg~~~g~~~~Ptvl  343 (451)
T cd07150         264 SASRIIVEEPVYDEFVKKFVARASKLKVGDPRDPDTVIGPLISPRQVERIKRQVEDAVAKGAKLLTGGKYDGNFYQPTVL  343 (451)
T ss_pred             CCeeEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCcEEcCEEE
Confidence            3345688888887777665443333           36888888888888888776522           1345677888


Q ss_pred             cCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         379 TKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       379 s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      + +....+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       344 ~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~  409 (451)
T cd07150         344 T-DVTPDMRIFREETFGPVTSVIPAKDAEEALELANDTEYGLSAAILTNDLQRAFKLAERLESGMVH  409 (451)
T ss_pred             e-CCCCCCHHHhCCCcCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhcCcCEEE
Confidence            7 55666789999999975   668899999999999999999999999999999999999999985

Vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid and other related sequences are included in this CD. The E. coli vanillin dehydrogenase (LigV) preferred NAD+ to NADP+ and exhibited a broad substrate preference, including vanillin, benzaldehyde, protocatechualdehyde, m-anisaldehyde, and p-hydroxybenzaldehyde.

>cd07089 ALDH_CddD-AldA-like Rhodococcus ruber 6-oxolauric acid dehydrogenase-like and related proteins

Probab=98.91  E-value=1.8e-09  Score=111.27  Aligned_cols=120  Identities=25%  Similarity=0.460  Sum_probs=96.1

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc----------------CCCCce
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN----------------SDYGLA  374 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~----------------~~~gl~  374 (442)
                      .+..||+..+++.|.+.+....++           .+||++....++.+++.++.+.+                .++.+.
T Consensus       269 ~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gp~i~~~~~~~v~~~i~~a~~~Ga~~l~gg~~~~~~~~g~~~~  348 (459)
T cd07089         269 TTRLLVPRSRYDEVVEALAAAFEALPVGDPADPGTVMGPLISAAQRDRVEGYIARGRDEGARLVTGGGRPAGLDKGFYVE  348 (459)
T ss_pred             CeEEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCeEEC
Confidence            345688888888777766544433           36888888888888888876521                234466


Q ss_pred             EEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         375 AAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       375 ~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++|++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..+++++++++++|.||
T Consensus       349 Ptvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~G~v~  418 (459)
T cd07089         349 PTLFA-DVDNDMRIAQEEIFGPVLVVIPYDDDDEAVRIANDSDYGLSGGVWSADVDRAYRVARRIRTGSVG  418 (459)
T ss_pred             CEEEE-cCCCCCHHHhCCCcCceEEEeccCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhcCcCeEE
Confidence            78887 55667889999999975   667889999999999999999999999999999999999999985

The 6-oxolauric acid dehydrogenase (CddD) from Rhodococcus ruber SC1 which converts 6-oxolauric acid to dodecanedioic acid; and the aldehyde dehydrogenase (locus SSP0762) from Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 and also, the Mycobacterium tuberculosis H37Rv ALDH AldA (locus Rv0768) sequence; and other similar sequences, are included in this CD.

>cd07088 ALDH_LactADH-AldA Escherichia coli lactaldehyde dehydrogenase AldA-like

Probab=98.90  E-value=1.8e-09  Score=111.53  Aligned_cols=120  Identities=26%  Similarity=0.470  Sum_probs=93.9

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCCCceE
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAA  375 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~  375 (442)
                      .+..+|+..+++.|...+....++           .+||++.-..++.+++.++.+..               .++.+.+
T Consensus       279 ~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~~~~g~~~~P  358 (468)
T cd07088         279 AERVYVHEDIYDEFMEKLVEKMKAVKVGDPFDAATDMGPLVNEAALDKVEEMVERAVEAGATLLTGGKRPEGEKGYFYEP  358 (468)
T ss_pred             CeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCceeEcC
Confidence            344677778877776665443333           25888888888887777776521               2344678


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|+. +.+..+.+++++.||+|   ..+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       359 tvl~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~  427 (468)
T cd07088         359 TVLT-NVRQDMEIVQEEIFGPVLPVVKFSSLDEAIELANDSEYGLTSYIYTENLNTAMRATNELEFGETY  427 (468)
T ss_pred             EEEe-cCCCCCchhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            8887 55566888999999975   678899999999999999999999999999999999999999985

Lactaldehyde dehydrogenase from Escherichia coli (AldA, LactADH, EC=1.2.1.22), an NAD(+)-dependent enzyme involved in the metabolism of L-fucose and L-rhamnose, and other similar sequences are present in this CD.

>PRK03137 1-pyrroline-5-carboxylate dehydrogenase; Provisional

Probab=98.90  E-value=2.1e-09  Score=112.11  Aligned_cols=119  Identities=24%  Similarity=0.419  Sum_probs=94.2

Q ss_pred             CCcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHhc-------------CCCCceEEEec
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERANN-------------SDYGLAAAVFT  379 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an~-------------~~~gl~~~v~s  379 (442)
                      ...+|+..++++|...+....++          .+||++.-..++.+.+.++.+..             .++.+.++|+.
T Consensus       324 ~rv~V~~~v~d~f~~~l~~~~~~l~~g~p~~~~~~Gpli~~~~~~~v~~~v~~a~~~~~vl~Gg~~~~~~g~~~~Ptvl~  403 (514)
T PRK03137        324 SRAIVHEDVYDEVLEKVVELTKELTVGNPEDNAYMGPVINQASFDKIMSYIEIGKEEGRLVLGGEGDDSKGYFIQPTIFA  403 (514)
T ss_pred             eEEEEeHHHHHHHHHHHHHHHHhCCCCCCCCccCcCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCceEEeeEEEe
Confidence            44677888877776665443333          26788888888887777775421             23456788887


Q ss_pred             CCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         380 KDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       380 ~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                       +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       404 -~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~N~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  468 (514)
T PRK03137        404 -DVDPKARIMQEEIFGPVVAFIKAKDFDHALEIANNTEYGLTGAVISNNREHLEKARREFHVGNLY  468 (514)
T ss_pred             -CCCCCCHHHhCCCCCceEEEEecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcCeEE
Confidence             55667889999999975   668899999999999999999999999999999999999999985

>cd07102 ALDH_EDX86601 Uncharacterized aldehyde dehydrogenase of Synechococcus sp

Probab=98.89  E-value=2.2e-09  Score=110.54  Aligned_cols=120  Identities=26%  Similarity=0.390  Sum_probs=93.2

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------------CCCCc
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------------SDYGL  373 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------------~~~gl  373 (442)
                      ....+|+..++++|...+....++           .+||++....++.+++.++.+..                 .++.+
T Consensus       261 ~~~v~V~~~v~~~f~~~L~~~~~~l~vg~p~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~vl~gg~~~~~~~~~g~~~  340 (452)
T cd07102         261 IERIYVHESIYDAFVEAFVAVVKGYKLGDPLDPSTTLGPVVSARAADFVRAQIADAIAKGARALIDGALFPEDKAGGAYL  340 (452)
T ss_pred             CcEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCCceE
Confidence            345677888877776665444333           25788877777777777765411                 23445


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+++++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       341 ~Ptvl~-~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~  411 (452)
T cd07102         341 APTVLT-NVDHSMRVMREETFGPVVGIMKVKSDAEAIALMNDSEYGLTASVWTKDIARAEALGEQLETGTVF  411 (452)
T ss_pred             cCEEEe-cCCCCChhhhcCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHHcCcceEE
Confidence            678887 55567789999999975   668899999999999999999999999999999999999999986

PCC 7335 (EDX86601). Uncharacterized aldehyde dehydrogenase of Synechococcus sp. PCC 7335 (locus EDX86601) and other similar sequences, are present in this CD.

>cd07144 ALDH_ALD2-YMR170C Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c)-like

Probab=98.89  E-value=1.6e-09  Score=112.36  Aligned_cols=126  Identities=29%  Similarity=0.545  Sum_probs=98.6

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhc---------------
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANN---------------  368 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~---------------  368 (442)
                      |..|......+|+..++++|...+....++            .+||++.-..++.+.+.++.+..               
T Consensus       284 GQ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~  363 (484)
T cd07144         284 GQNCTATSRIYVQESIYDKFVEKFVEHVKQNYKVGSPFDDDTVVGPQVSKTQYDRVLSYIEKGKKEGAKLVYGGEKAPEG  363 (484)
T ss_pred             CCCCCCCceEEEcHHHHHHHHHHHHHHHHhhCCcCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCccc
Confidence            333444455788888888877766544432            25888888888888888876531               


Q ss_pred             --CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         369 --SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       369 --~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                        .++.+.+++++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       364 ~~~g~~~~Ptvl~-~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~a~~~~~~l~~G~v~  441 (484)
T cd07144         364 LGKGYFIPPTIFT-DVPQDMRIVKEEIFGPVVVISKFKTYEEAIKKANDTTYGLAAAVFTKDIRRAHRVARELEAGMVW  441 (484)
T ss_pred             CCCCceECCEEEe-CCCCCCchhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcCEEE
Confidence              12335678887 56677889999999975   668899999999999999999999999999999999999999985

NAD(P)+-dependent Saccharomyces cerevisiae aldehyde dehydrogenase 2 (YMR170c, ALD5, EC=1.2.1.5) and other similar sequences, are present in this CD.

>cd07091 ALDH_F1-2_Ald2-like ALDH subfamily: ALDH families 1and 2, including 10-formyltetrahydrofolate dehydrogenase, NAD+-dependent retinal dehydrogenase 1 and related proteins

Probab=98.89  E-value=1.6e-09  Score=112.26  Aligned_cols=124  Identities=34%  Similarity=0.586  Sum_probs=97.4

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCC
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYG  372 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~g  372 (442)
                      .+...+..||+..++++|...+....++           .+||++.-..++.+.+.++.+..              .++.
T Consensus       284 ~C~a~~rv~V~~~v~~~f~~~L~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~vl~gg~~~~~~~~~  363 (476)
T cd07091         284 CCCAGSRIFVQESIYDEFVEKFKARAEKRVVGDPFDPDTFQGPQVSKAQFDKILSYIESGKKEGATLLTGGERHGSKGYF  363 (476)
T ss_pred             CCcCCcEEEEeHHHHHHHHHHHHHHHhhCCCCCCCCCCCcCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCce
Confidence            3434455788888888877766544333           26888887788888777776521              2345


Q ss_pred             ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.++|+. +....+.+++++.||+|   +.+++.+++++.+|+++|||++||||+|..++.++++++++|+|+
T Consensus       364 ~~Ptvl~-~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gLsa~v~t~d~~~~~~~~~~l~~g~v~  435 (476)
T cd07091         364 IQPTVFT-DVKDDMKIAKEEIFGPVVTILKFKTEDEVIERANDTEYGLAAGVFTKDINKALRVSRALKAGTVW  435 (476)
T ss_pred             ECcEEec-CCCCCChhhhCCCCCCeEEEeecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEE
Confidence            6788887 56667889999999975   668899999999999999999999999999999999999999985

ALDH subfamily which includes the NAD+-dependent retinal dehydrogenase 1 (RALDH 1, ALDH1, EC=1.2.1.36), also known as aldehyde dehydrogenase family 1 member A1 (ALDH1A1), in humans, a homotetrameric, cytosolic enzyme that catalyzes the oxidation of retinaldehyde to retinoic acid. Human ALDH1B1 and ALDH2 are also in this cluster; both are mitochrondrial homotetramers which play important roles in acetaldehyde oxidation; ALDH1B1 in response to UV light exposure and ALDH2 during ethanol metabolism. 10-formyltetrahydrofolate dehydrogenase (FTHFDH, EC=1.5.1.6), also known as aldehyde dehydrogenase family 1 member L1 (ALDH1L1), in humans, a multi-domain homotetramer with an N-terminal formyl transferase domain and a C-terminal ALDH domain. FTHFDH catalyzes an NADP+-dependent dehydrogenase reaction resulting in the co

>cd07110 ALDH_F10_BADH Arabidopsis betaine aldehyde dehydrogenase 1 and 2, ALDH family 10A8 and 10A9-like

Probab=98.89  E-value=2.6e-09  Score=110.02  Aligned_cols=121  Identities=27%  Similarity=0.488  Sum_probs=94.6

Q ss_pred             CCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc----------------CCCCc
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN----------------SDYGL  373 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~----------------~~~gl  373 (442)
                      ..+..||+..+++.|...+....++           .+||++.-..++.+++.++.+..                .++.+
T Consensus       265 a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~~~~~~v~~a~~~Ga~~~~gg~~~~~~~~~~~~  344 (456)
T cd07110         265 ATSRLLVHESIADAFLERLATAAEAIRVGDPLEEGVRLGPLVSQAQYEKVLSFIARGKEEGARLLCGGRRPAHLEKGYFI  344 (456)
T ss_pred             CCceEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCCcccccCCCCcC
Confidence            3344677878877776665444333           25888888888888888876421                13345


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++++. +....+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       345 ~Ptvl~-~v~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~  415 (456)
T cd07110         345 APTVFA-DVPTDSRIWREEIFGPVLCVRSFATEDEAIALANDSEYGLAAAVISRDAERCDRVAEALEAGIVW  415 (456)
T ss_pred             CCEEEe-cCCCCChHhhCCCcCCeEEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            678876 55566788999999975   668899999999999999999999999999999999999999985

Present in this CD are the Arabidopsis betaine aldehyde dehydrogenase (BADH) 1 (chloroplast) and 2 (mitochondria), also known as, aldehyde dehydrogenase family 10 member A8 and aldehyde dehydrogenase family 10 member A9, respectively, and are putative dehydration- and salt-inducible BADHs (EC 1.2.1.8) that catalyze the oxidation of betaine aldehyde to the compatible solute glycine betaine.

>cd07092 ALDH_ABALDH-YdcW Escherichia coli NAD+-dependent gamma-aminobutyraldehyde dehydrogenase YdcW-like

Probab=98.88  E-value=2.8e-09  Score=109.69  Aligned_cols=120  Identities=26%  Similarity=0.432  Sum_probs=93.8

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHh-------------cCCCCceEEE
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERAN-------------NSDYGLAAAV  377 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an-------------~~~~gl~~~v  377 (442)
                      .+..+|+..++++|...+....+.           .+||++....++.+.+.++.+.             ..++.+.+++
T Consensus       263 ~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~i~~~i~~a~~ga~~~~gg~~~~~~g~~~~Ptv  342 (450)
T cd07092         263 ACRVYVHESVYDEFVAALVEAVSAIRVGDPDDEDTEMGPLNSAAQRERVAGFVERAPAHARVLTGGRRAEGPGYFYEPTV  342 (450)
T ss_pred             CcEEEEeHHHHHHHHHHHHHHHhhCCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCccEEeeEE
Confidence            344677777777776665443332           2588888777888887777552             1234567888


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +. +....+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       343 l~-~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~vft~d~~~~~~~~~~l~~g~v~  409 (450)
T cd07092         343 VA-GVAQDDEIVQEEIFGPVVTVQPFDDEDEAIELANDVEYGLASSVWTRDVGRAMRLSARLDFGTVW  409 (450)
T ss_pred             EE-cCCCCChHHhCCCcCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCccEEE
Confidence            86 55567889999999975   668999999999999999999999999999999999999999985

NAD+-dependent, tetrameric, gamma-aminobutyraldehyde dehydrogenase (ABALDH), YdcW of Escherichia coli K12, catalyzes the oxidation of gamma-aminobutyraldehyde to gamma-aminobutyric acid. ABALDH can also oxidize n-alkyl medium-chain aldehydes, but with a lower catalytic efficiency.

>cd07119 ALDH_BADH-GbsA Bacillus subtilis NAD+-dependent betaine aldehyde dehydrogenase-like

Probab=98.88  E-value=2.4e-09  Score=111.04  Aligned_cols=123  Identities=30%  Similarity=0.489  Sum_probs=97.0

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------------C
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------------S  369 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------------~  369 (442)
                      +...+..||+..++++|...+.....++           +||++.-..++.+++.++.+..                  .
T Consensus       277 C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~G~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~~~~~  356 (482)
T cd07119         277 CSAGSRLLVEESIHDKFVAALAERAKKIKLGNGLDADTEMGPLVSAEHREKVLSYIQLGKEEGARLVCGGKRPTGDELAK  356 (482)
T ss_pred             CCCCeEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCcCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccCCC
Confidence            3333456888888887777665444433           6788887778888887776421                  1


Q ss_pred             CCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         370 DYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       370 ~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++.+.++|+. +....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+|+
T Consensus       357 g~~~~Ptvl~-~~~~~~~i~~eE~FgPvl~v~~~~~~deai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~  431 (482)
T cd07119         357 GYFVEPTIFD-DVDRTMRIVQEEIFGPVLTVERFDTEEEAIRLANDTPYGLAGAVWTKDIARANRVARRLRAGTVW  431 (482)
T ss_pred             CceECCEEEe-cCCCCChHhhCCCCCceEEEeccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEE
Confidence            3446778887 66677889999999975   668899999999999999999999999999999999999999985

Included in this CD is the NAD+-dependent, betaine aldehyde dehydrogenase (BADH, GbsA, EC=1.2.1.8) of Bacillus subtilis involved in the synthesis of the osmoprotectant glycine betaine from choline or glycine betaine aldehyde.

>cd07083 ALDH_P5CDH ALDH subfamily NAD+-dependent delta(1)-pyrroline-5-carboxylate dehydrogenase-like

Probab=98.88  E-value=2.6e-09  Score=111.08  Aligned_cols=120  Identities=20%  Similarity=0.364  Sum_probs=95.1

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-------------CCCCceEEE
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-------------SDYGLAAAV  377 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-------------~~~gl~~~v  377 (442)
                      ....+|+..++++|...+....++           .+||++.-..++.+.+.++.+..             .++.+.+++
T Consensus       306 ~~rv~V~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~g~vl~gg~~~~~~g~~~~Ptv  385 (500)
T cd07083         306 ASRLILTQGAYEPVLERLLKRAERLSVGPPEENGTDLGPVIDAEQEAKVLSYIEHGKNEGQLVLGGKRLEGEGYFVAPTV  385 (500)
T ss_pred             CeeEEEcHHHHHHHHHHHHHHHHcCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEccEE
Confidence            345688888887777665444333           25888888888888888876531             134567888


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeC--CHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~--~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +. +....+.+++++.||+|   ..++  +.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       386 l~-~~~~~~~~~~eE~FgPvl~v~~~~d~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~  454 (500)
T cd07083         386 VE-EVPPKARIAQEEIFGPVLSVIRYKDDDFAEALEVANSTPYGLTGGVYSRKREHLEEARREFHVGNLY  454 (500)
T ss_pred             Ee-CCCCCChHhhCCCCCceEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCeeEEE
Confidence            87 55567889999999975   5677  88999999999999999999999999999999999999985

ALDH subfamily of the NAD+-dependent, delta(1)-pyrroline-5-carboxylate dehydrogenases (P5CDH, EC=1.5.1.12). The proline catabolic enzymes, proline dehydrogenase and P5CDH catalyze the two-step oxidation of proline to glutamate. P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA). These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes. Monofunctional enzyme sequences such as those seen in the Bacillus RocA P5CDH are also present in this subfamily as well as the human ALDH4A1 P5CDH and the Drosophila Aldh17 P5CDH.

>cd07126 ALDH_F12_P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12

Probab=98.87  E-value=2.6e-09  Score=110.05  Aligned_cols=127  Identities=16%  Similarity=0.188  Sum_probs=92.7

Q ss_pred             EeCCcccCCCCccccccee-ccCcchhHHHHHh------hcCCcccccccCCHHHHHHHHhc--------------C---
Q psy5844         314 VAGGGRAGDKGFYVQPTVF-ANVRDDMKIAREE------IFGPVQQLIRFSSIEEVIERANN--------------S---  369 (442)
Q Consensus       314 ~~gg~~~~~~g~~v~pti~-~~~~~~~~~~~~e------~fgPvl~v~~~~~~~eai~~an~--------------~---  369 (442)
                      ..|..|...+..|||..++ +.|...+....++      .+||++... .+...+.++.+.+              .   
T Consensus       277 naGQ~C~a~~rv~V~~~i~~d~f~~~l~~~~~~~~~g~~~~Gpli~~~-~~~v~~~i~~a~~~~Ga~~l~GG~~~~~~~~  355 (489)
T cd07126         277 CSGQKCSAQSILFAHENWVQAGILDKLKALAEQRKLEDLTIGPVLTWT-TERILDHVDKLLAIPGAKVLFGGKPLTNHSI  355 (489)
T ss_pred             cCCCcCCCCceEEEeCcchHHHHHHHHHHHHHhcccCCCcCCCCcCHH-HHHHHHHHHHHHhCCCCEEEeCCcccccccc
Confidence            3344444445678888854 6777665544333      268988665 6666666665431              0   


Q ss_pred             --C-CCceEEEecCC-----CChhhhhccccEeeeE---EeeCC--HHHHHHhhccCCccceeEEeccChhHHHHHHccc
Q psy5844         370 --D-YGLAAAVFTKD-----LDKTNYVTQGLRAGTL---IRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL  436 (442)
Q Consensus       370 --~-~gl~~~v~s~d-----~~~~~~~~~~~~~G~V---~vN~~--~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l  436 (442)
                        + +.+.++++..+     .+..+.+++++.||+|   +.+++  .+|+++.+|+++|||++||||+|..++.++++++
T Consensus       356 ~~~~~~~~PTvl~~~~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~~~deai~~aN~~~~gL~~~vft~d~~~~~~~~~~~  435 (489)
T cd07126         356 PSIYGAYEPTAVFVPLEEIAIEENFELVTTEVFGPFQVVTEYKDEQLPLVLEALERMHAHLTAAVVSNDIRFLQEVLANT  435 (489)
T ss_pred             cCCcceecCeEEEeccccccCCCCCHHHhCCCcCCEEEEEEECCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhC
Confidence              1 13677887422     4557899999999975   56777  8899999999999999999999999999999999


Q ss_pred             ccccc
Q psy5844         437 RAGTV  441 (442)
Q Consensus       437 ~~G~v  441 (442)
                      ++|++
T Consensus       436 ~~G~~  440 (489)
T cd07126         436 VNGTT  440 (489)
T ss_pred             CcceE
Confidence            99994

Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12), family 12: a proline catabolic enzyme of the aldehyde dehydrogenase (ALDH) protein superfamily. P5CDH is a mitochondrial enzyme involved in proline degradation and catalyzes the NAD + -dependent conversion of P5C to glutamate. The P5CDH, ALDH12A1 gene, in Arabidopsis, has been identified as an osmotic-stress-inducible ALDH gene. This CD contains both Viridiplantae and Alveolata P5CDH sequences.

>cd07139 ALDH_AldA-Rv0768 Mycobacterium tuberculosis aldehyde dehydrogenase AldA-like

Probab=98.87  E-value=3.1e-09  Score=109.90  Aligned_cols=123  Identities=23%  Similarity=0.394  Sum_probs=96.5

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc----------------CCC
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN----------------SDY  371 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~----------------~~~  371 (442)
                      +......+|+..+++.|...+....+++           +||++.-..++.+.+.++.+..                .++
T Consensus       279 C~a~~~v~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~  358 (471)
T cd07139         279 CVALTRILVPRSRYDEVVEALAAAVAALKVGDPLDPATQIGPLASARQRERVEGYIAKGRAEGARLVTGGGRPAGLDRGW  358 (471)
T ss_pred             CcCCcEEEEeHhHHHHHHHHHHHHHHhCCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCe
Confidence            3333456888888877776665444332           6888888888888887765421                134


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|++ +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+|+
T Consensus       359 ~~~Ptvl~-~v~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~  431 (471)
T cd07139         359 FVEPTLFA-DVDNDMRIAQEEIFGPVLSVIPYDDEDDAVRIANDSDYGLSGSVWTADVERGLAVARRIRTGTVG  431 (471)
T ss_pred             EEccEEEe-cCCCcchHHhCccCCCeEEEeecCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            46778887 66667889999999975   678899999999999999999999999999999999999999985

The Mycobacterium tuberculosis NAD+-dependent, aldehyde dehydrogenase PDB structure, 3B4W, and the Mycobacterium tuberculosis H37Rv aldehyde dehydrogenase AldA (locus Rv0768) sequence, as well as the Rhodococcus rhodochrous ALDH involved in haloalkane catabolism, and other similar sequences, are included in this CD.

>cd07134 ALDH_AlkH-like Pseudomonas putida Aldehyde dehydrogenase AlkH-like

Probab=98.86  E-value=3.6e-09  Score=108.10  Aligned_cols=119  Identities=23%  Similarity=0.276  Sum_probs=89.6

Q ss_pred             CCcccccceeccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhc-------------CCCCceEEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANN-------------SDYGLAAAV  377 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~-------------~~~gl~~~v  377 (442)
                      +..|||..++++|...+....+.            .+||+++-..++.+.+.++.+..             .++.+.+++
T Consensus       244 ~rv~V~~~v~d~f~~~L~~~~~~~~~~~~~~~~~~~~gpli~~~~~~~i~~~i~~a~~~ga~~~~gg~~~~~g~~~~Ptv  323 (433)
T cd07134         244 DYVFVHESVKDAFVEHLKAEIEKFYGKDAARKASPDLARIVNDRHFDRLKGLLDDAVAKGAKVEFGGQFDAAQRYIAPTV  323 (433)
T ss_pred             cEEEECHHHHHHHHHHHHHHHHHHcCCCCCcCCCCccCCcCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCCCCCEEeeEE
Confidence            34566666666665554332222            25666666666666666655421             245567888


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++ +.+..+.+.+++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       324 l~-~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~~~~~~~~l~~g~v~  390 (433)
T cd07134         324 LT-NVTPDMKIMQEEIFGPVLPIITYEDLDEVIEYINAKPKPLALYVFSKDKANVNKVLARTSSGGVV  390 (433)
T ss_pred             Ee-CCCCccHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEE
Confidence            87 56667889999999975   668999999999999999999999999999999999999999985

Aldehyde dehydrogenase AlkH (locus name P12693, EC=1.2.1.3) of the alkBFGHJKL operon that allows Pseudomonas putida to metabolize alkanes and the aldehyde dehydrogenase AldX of Bacillus subtilis (locus P46329, EC=1.2.1.3), and similar sequences, are present in this CD.

>cd07104 ALDH_BenzADH-like ALDH subfamily: NAD(P)+-dependent benzaldehyde dehydrogenase II, vanillin dehydrogenase, p-hydroxybenzaldehyde dehydrogenase and related proteins

Probab=98.85  E-value=3.9e-09  Score=108.06  Aligned_cols=120  Identities=24%  Similarity=0.408  Sum_probs=94.2

Q ss_pred             CCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------CCCCceEEEec
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFT  379 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s  379 (442)
                      .+..||+..+++.|...+....++           .+||++.-..++.+.+.++.+..           .++.+.++++.
T Consensus       245 ~~~v~v~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~i~~~i~~a~~~G~~~~~gg~~~g~~~~Ptvl~  324 (431)
T cd07104         245 AGRILVHESVYDEFVEKLVAKAKALPVGDPRDPDTVIGPLINERQVDRVHAIVEDAVAAGARLLTGGTYEGLFYQPTVLS  324 (431)
T ss_pred             CcEEEEcHHHHHHHHHHHHHHHHhcCcCCCCCCCCccCcccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCceECCEEee
Confidence            344677888877776665443333           26888888888888888776532           12346678876


Q ss_pred             CCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         380 KDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       380 ~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                       +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       325 -~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~  389 (431)
T cd07104         325 -DVTPDMPIFREEIFGPVAPVIPFDDDEEAVELANDTEYGLSAAVFTRDLERAMAFAERLETGMVH  389 (431)
T ss_pred             -cCCCCChhhhCcCcCCeEEEEEECCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhcCcCeEE
Confidence             55566788999999975   668999999999999999999999999999999999999999985

ALDH subfamily which includes the NAD(P)+-dependent, benzaldehyde dehydrogenase II (XylC, BenzADH, EC=1.2.1.28) involved in the oxidation of benzyl alcohol to benzoate; p-hydroxybenzaldehyde dehydrogenase (PchA, HBenzADH) which catalyzes the oxidation of p-hydroxybenzaldehyde to p-hydroxybenzoic acid; vanillin dehydrogenase (Vdh, VaniDH) involved in the metabolism of ferulic acid as seen in Pseudomonas putida KT2440; and other related sequences.

>cd07115 ALDH_HMSADH_HapE Pseudomonas fluorescens 4-hydroxymuconic semialdehyde dehydrogenase-like

Probab=98.85  E-value=2.5e-09  Score=110.12  Aligned_cols=125  Identities=23%  Similarity=0.470  Sum_probs=98.1

Q ss_pred             CcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCC
Q psy5844         317 GGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDY  371 (442)
Q Consensus       317 g~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~  371 (442)
                      ..|...+..||+..++++|...+....+++           +||++....++.+.+.++.+..              .++
T Consensus       258 Q~C~a~~~v~V~~~i~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~gg~~~~~~g~  337 (453)
T cd07115         258 QMCTAGSRLLVHESIYDEFLERFTSLARSLRPGDPLDPKTQMGPLVSQAQFDRVLDYVDVGREEGARLLTGGKRPGARGF  337 (453)
T ss_pred             CCCCCCeEEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCCCc
Confidence            334444557888888888877765544433           6899998888888888876521              123


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|+. +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.+++++|++|.|+
T Consensus       338 ~~~Ptvl~-~~~~~~~~~~eE~FgPvl~v~~~~~~~eai~~~n~~~~gL~~~ifs~d~~~~~~~~~~l~~G~v~  410 (453)
T cd07115         338 FVEPTIFA-AVPPEMRIAQEEIFGPVVSVMRFRDEEEALRIANGTEYGLAAGVWTRDLGRAHRVAAALKAGTVW  410 (453)
T ss_pred             eECCEEEe-cCCCCChHhhCCCcCceEEEEeeCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhcCccEEE
Confidence            45577776 45556788999999965   778999999999999999999999999999999999999999985

4-hydroxymuconic semialdehyde dehydrogenase (HapE, EC=1.2.1.61) of Pseudomonas fluorescens ACB involved in 4-hydroxyacetophenone degradation, and putative hydroxycaproate semialdehyde dehydrogenase (ChnE) of Brachymonas petroleovorans involved in cyclohexane metabolism, and other similar sequences, are present in this CD.

>cd07114 ALDH_DhaS Uncharacterized Candidatus pelagibacter aldehyde dehydrogenase, DhaS-like

Probab=98.85  E-value=3.6e-09  Score=109.00  Aligned_cols=121  Identities=28%  Similarity=0.533  Sum_probs=94.5

Q ss_pred             CCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------------CCC
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------------SDY  371 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------------~~~  371 (442)
                      .....||+..+++.|...+....+++           +||+++-..++.+.+.++.+..                  .+.
T Consensus       264 a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~~g~  343 (457)
T cd07114         264 AGSRLLVQRSIYDEFVERLVARARAIRVGDPLDPETQMGPLATERQLEKVERYVARAREEGARVLTGGERPSGADLGAGY  343 (457)
T ss_pred             CCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCC
Confidence            33456888888877776655444332           5888888888888877775521                  123


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|++ +....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|...+.++++++++|.|+
T Consensus       344 ~~~Ptvl~-~~~~~~~~~~~E~fgPvl~v~~~~~~deai~~~n~~~~gL~~~ift~d~~~~~~~~~~l~~g~v~  416 (457)
T cd07114         344 FFEPTILA-DVTNDMRIAQEEVFGPVLSVIPFDDEEEAIALANDSEYGLAAGIWTRDLARAHRVARAIEAGTVW  416 (457)
T ss_pred             EECCEEEe-CCCCCChhhhcCCcCceEEEeccCCHHHHHHHhhCCCcCceeEEECCCHHHHHHHHHhcCcceEE
Confidence            45678886 45566789999999975   668899999999999999999999999999999999999999985

Uncharacterized aldehyde dehydrogenase from Candidatus pelagibacter (DhaS) and other related sequences are present in this CD.

>cd07125 ALDH_PutA-P5CDH Delta(1)-pyrroline-5-carboxylate dehydrogenase, PutA

Probab=98.85  E-value=3.9e-09  Score=110.23  Aligned_cols=121  Identities=20%  Similarity=0.301  Sum_probs=94.9

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-------------CCCCce
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-------------SDYGLA  374 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-------------~~~gl~  374 (442)
                      |...+..+|+..++++|...+....++           .+||++.-..++.+++.++.+..             .++.+.
T Consensus       313 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~~~vl~gg~~~~~~g~~~~  392 (518)
T cd07125         313 CSALRLLYLQEEIAERFIEMLKGAMASLKVGDPWDLSTDVGPLIDKPAGKLLRAHTELMRGEAWLIAPAPLDDGNGYFVA  392 (518)
T ss_pred             CCCCeEEEEcchhHHHHHHHHHHHHhcCCccCCCCCCCCcCCCcCHHHHHHHHHHHHHHHhCCEEEeCCCcCCCCCeEEc
Confidence            333345688888988877666544433           25788888888888777776521             244566


Q ss_pred             EEEecCCCChhhhhccccEeeeE---EeeC--CHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         375 AAVFTKDLDKTNYVTQGLRAGTL---IRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       375 ~~v~s~d~~~~~~~~~~~~~G~V---~vN~--~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++|++. .  .+.+++++.||+|   +.++  +.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       393 Ptvl~~-v--~~~i~~eE~FgPVl~v~~~~~~~~deAi~~~n~~~~gLta~Vft~d~~~~~~~~~~l~~G~V~  462 (518)
T cd07125         393 PGIIEI-V--GIFDLTTEVFGPILHVIRFKAEDLDEAIEDINATGYGLTLGIHSRDEREIEYWRERVEAGNLY  462 (518)
T ss_pred             cEEEee-c--CChHhhCcccCCeEEEEEeCCCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcCeEE
Confidence            788763 3  6788999999975   6678  99999999999999999999999999999999999999985

The proline catabolic enzymes of the aldehyde dehydrogenase (ALDH) protein superfamily, proline dehydrogenase and Delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, (EC=1.5.1.12 )), catalyze the two-step oxidation of proline to glutamate; P5CDH catalyzes the oxidation of glutamate semialdehyde, utilizing NAD+ as the electron acceptor. In some bacteria, the two enzymes are fused into the bifunctional flavoenzyme, proline utilization A (PutA) These enzymes play important roles in cellular redox control, superoxide generation, and apoptosis. In certain prokaryotes such as Escherichia coli, PutA is also a transcriptional repressor of the proline utilization genes.

>cd07081 ALDH_F20_ACDH_EutE-like Coenzyme A acylating aldehyde dehydrogenase (ACDH), Ethanolamine utilization protein EutE, and related proteins

Probab=98.85  E-value=1.4e-09  Score=110.72  Aligned_cols=122  Identities=10%  Similarity=0.139  Sum_probs=91.9

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcC----------------CCCceEE---
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNS----------------DYGLAAA---  376 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~----------------~~gl~~~---  376 (442)
                      |..+......+|+..|+++|...+.    +..||++.-..++.+.+.|+.+...                ++...++   
T Consensus       235 GQ~C~a~~rv~V~~~i~d~f~~~l~----~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~gg~~~~~~~~~G~~~~pt~~~  310 (439)
T cd07081         235 GVICASEQSVIVVDSVYDEVMRLFE----GQGAYKLTAEELQQVQPVILKNGDVNRDIVGQDAYKIAAAAGLKVPQETRI  310 (439)
T ss_pred             CCCCCCCCEEEEcHHHHHHHHHHHH----HcCCccCCHHHHHHHHHHHHhcCCcCCcccCCCHHHHHHHcCCccCCCceE
Confidence            3334444557899999887665442    3348988877777777777654321                2233444   


Q ss_pred             EecCCCC--hhhhhccccEeeeE---EeeCCHHHHHHhhccC----CccceeEEeccC---hhHHHHHHccccccccC
Q psy5844         377 VFTKDLD--KTNYVTQGLRAGTL---IRFSSIEEVIERANNS----DYGLAAAVFTKD---LDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~--~~~~~~~~~~~G~V---~vN~~~~~av~~an~~----~yGl~~~vft~d---~~~~~~~~~~l~~G~v~  442 (442)
                      ++. ++.  ..+.+.+++.||+|   +..++.+||++.+|++    +|||+++|||+|   ..++++++++|++|+||
T Consensus       311 i~~-~~~~~~~~~i~~eE~FGPVl~v~~~~~~dEAi~~aN~~~n~~~~GLsa~V~T~d~~~~~~a~~~a~~l~~G~V~  387 (439)
T cd07081         311 LIG-EVTSLAEHEPFAHEKLSPVLAMYRAANFADADAKALALKLEGGCGHTSAMYSDNIKAIENMNQFANAMKTSRFV  387 (439)
T ss_pred             EEE-ecCCCCCCchhhhCccCceEEEEEcCCHHHHHHHHHHHhhccCCCceEEEECCCcchHHHHHHHHhhCCceEEE
Confidence            665 555  67889999999975   6689999999999865    899999999999   99999999999999986

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA. The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH, and may be critical enzymes in the fermentative pathway.

>KOG2449|consensus

Probab=98.84  E-value=2e-09  Score=88.14  Aligned_cols=136  Identities=24%  Similarity=0.302  Sum_probs=113.0

Q ss_pred             HHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHh-cCCEEEeCCcccCCCCcccccceeccCcchh
Q psy5844         261 YDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKS-QGAQLVAGGGRAGDKGFYVQPTVFANVRDDM  339 (442)
Q Consensus       261 ~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~  339 (442)
                      ...+.+.|++..+.+++-+...+++|.     .+..+++.++|+.-.- .|.....-|.   ..++|+.|+++. +.+.|
T Consensus         8 aksW~~~lve~ak~l~v~~g~kp~tD~-----~a~~~ri~~liqS~~~~~~r~~yl~~y---a~~~f~~~tiLs-vtP~m   78 (157)
T KOG2449|consen    8 AKSWHPTLVEDAKVLKVNAGEKPQTDK-----YAPKVRIDKLIQSEDPLDGRFIYLPGY---AEGNFVGPTILS-VTPNM   78 (157)
T ss_pred             hhhhhHHHHHhhhheEeccCCCCCccc-----hhHHHHHHHHhcCcCccCCceEEeecc---ccCCcccceEEE-ecCCc
Confidence            466788889999999998888888886     6667788888765211 1323332222   467899999998 99999


Q ss_pred             HHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         340 KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       340 ~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      ....+|+||||+.....++++++|.++|+.+||....+||.+...++.+.++..+|.+-+|.+..-
T Consensus        79 s~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qig~~~~ip~  144 (157)
T KOG2449|consen   79 SCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQIGANVPIPV  144 (157)
T ss_pred             ceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccceeccccccc
Confidence            999999999999999999999999999999999999999999999999999999999988877643

>cd07145 ALDH_LactADH_F420-Bios Methanocaldococcus jannaschii NAD+-dependent lactaldehyde dehydrogenase-like

Probab=98.84  E-value=2.7e-09  Score=109.93  Aligned_cols=123  Identities=23%  Similarity=0.298  Sum_probs=95.9

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc------------CCCCceE
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN------------SDYGLAA  375 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~------------~~~gl~~  375 (442)
                      +...+..||+..++++|...+....++           .+||++.-..++.+.+.++.+..            .++.+.+
T Consensus       266 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~vl~gg~~~~g~~~~P  345 (456)
T cd07145         266 CNAVKRILVEEEVYDKFLKLLVEKVKKLKVGDPLDESTDLGPLISPEAVERMENLVNDAVEKGGKILYGGKRDEGSFFPP  345 (456)
T ss_pred             CccCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCCeEECC
Confidence            333345678888887776665443333           25888888888888888876521            1344667


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|++ +....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       346 tvl~-~~~~~~~i~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~~~~g~v~  414 (456)
T cd07145         346 TVLE-NDTPDMIVMKEEVFGPVLPIAKVKDDEEAVEIANSTEYGLQASVFTNDINRALKVARELEAGGVV  414 (456)
T ss_pred             Eeec-CCCCCChHhhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            8887 55567889999999975   668999999999999999999999999999999999999999985

NAD+-dependent, lactaldehyde dehydrogenase (EC=1.2.1.22) involved the biosynthesis of coenzyme F(420) in Methanocaldococcus jannaschii through the oxidation of lactaldehyde to lactate and generation of NAPH, and similar sequences are included in this CD.

>TIGR01722 MMSDH methylmalonic acid semialdehyde dehydrogenase

Probab=98.83  E-value=5e-09  Score=108.42  Aligned_cols=116  Identities=17%  Similarity=0.210  Sum_probs=89.6

Q ss_pred             cccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc------------------CCCCceE
Q psy5844         325 FYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN------------------SDYGLAA  375 (442)
Q Consensus       325 ~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~------------------~~~gl~~  375 (442)
                      .|++..+ +++.+.+....++           .+||++.-..++.+.+.++.+..                  .++.+.+
T Consensus       284 l~v~~~~-~~f~~~l~~~~~~~~~G~~~~~~~~~Gp~i~~~~~~~~~~~i~~a~~~Ga~il~gg~~~~~~~~~~g~~~~P  362 (477)
T TIGR01722       284 AVLVGAA-DEWVPEIRERAEKIRIGPGDDPGAEMGPLITPQAKDRVASLIAGGAAEGAEVLLDGRGYKVDGYEEGNWVGP  362 (477)
T ss_pred             EEEeCcH-HHHHHHHHHHHhcCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCCCCeEECC
Confidence            4555555 5555444333322           36888888888888888886521                  1234567


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|+. |.+..+.+.+++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       363 tvl~-~~~~~~~~~~eE~FgPvl~V~~~~~~~eai~~~n~~~~gl~~~v~t~d~~~~~~~~~~l~~g~v~  431 (477)
T TIGR01722       363 TLLE-RVPPTMKAYQEEIFGPVLCVLEADTLEEAIALINASPYGNGTAIFTRDGAAARRFQHEIEVGQVG  431 (477)
T ss_pred             EEee-CCCCCChhhhCCCCCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeeEE
Confidence            8887 55566789999999975   778899999999999999999999999999999999999999986

In Bacillus, a highly homologous protein to methylmalonic acid semialdehyde dehydrogenase, groups out from the main MMSDH clade with Listeria and Sulfolobus. This Bacillus protein has been suggested to be located in an iol operon and/or involved in myo-inositol catabolism, converting malonic semialdehyde to acetyl CoA ad CO2. The preceeding enzymes responsible for valine catabolism are present in Bacillus, Listeria, and Sulfolobus.

>cd07098 ALDH_F15-22 Aldehyde dehydrogenase family 15A1 and 22A1-like

Probab=98.82  E-value=3.9e-09  Score=109.04  Aligned_cols=119  Identities=23%  Similarity=0.365  Sum_probs=92.1

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc------------------CCCCc
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN------------------SDYGL  373 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~------------------~~~gl  373 (442)
                      ...+|+..++++|...+....++           .+||+++-..++.+.+.++.+..                  .++.+
T Consensus       270 ~rv~V~~~i~d~f~~~L~~~~~~l~~G~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~~~~~g~~~  349 (465)
T cd07098         270 ERVIVHEKIYDKLLEILTDRVQALRQGPPLDGDVDVGAMISPARFDRLEELVADAVEKGARLLAGGKRYPHPEYPQGHYF  349 (465)
T ss_pred             cEEEEcHHHHHHHHHHHHHHHHhcCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCcCcCCCCcEE
Confidence            44577777777666655443333           25788888788888777775411                  13445


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+++++ +....+.+.+++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       350 ~Ptvl~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLsa~i~t~d~~~~~~~~~~l~~g~v~  420 (465)
T cd07098         350 PPTLLV-DVTPDMKIAQEEVFGPVMVVMKASDDEEAVEIANSTEYGLGASVFGKDIKRARRIASQLETGMVA  420 (465)
T ss_pred             cCEEEe-CCCCCCHHHhCCCcCCeEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            678887 55566888999999975   668999999999999999999999999999999999999999885

Aldehyde dehydrogenase family members ALDH15A1 (Saccharomyces cerevisiae YHR039C) and ALDH22A1 (Arabidopsis thaliana, EC=1.2.1.3), and similar sequences, are in this CD. Significant improvement of stress tolerance in tobacco plants was observed by overexpressing the ALDH22A1 gene from maize (Zea mays) and was accompanied by a reduction of malondialdehyde derived from cellular lipid peroxidation.

>cd07112 ALDH_GABALDH-PuuC Escherichia coli NADP+-dependent gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase PuuC-like

Probab=98.81  E-value=4.9e-09  Score=108.10  Aligned_cols=123  Identities=28%  Similarity=0.439  Sum_probs=95.5

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc----------------CCC
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN----------------SDY  371 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~----------------~~~  371 (442)
                      |...+..+|+..+++.|...+....++           .+||+++-..++++.+.++.+..                .++
T Consensus       269 C~a~~~v~V~~~v~~~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~v~~a~~~Ga~v~~gg~~~~~~~~g~  348 (462)
T cd07112         269 CSAGSRLLVHESIKDEFLEKVVAAAREWKPGDPLDPATRMGALVSEAHFDKVLGYIESGKAEGARLVAGGKRVLTETGGF  348 (462)
T ss_pred             CCCCeeEEEcHHHHHHHHHHHHHHHhcCCcCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCCCe
Confidence            333345677888877777666544433           25888888888888888876531                123


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|++ +....+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       349 ~~~Ptvl~-~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~  421 (462)
T cd07112         349 FVEPTVFD-GVTPDMRIAREEIFGPVLSVITFDSEEEAVALANDSVYGLAASVWTSDLSRAHRVARRLRAGTVW  421 (462)
T ss_pred             EEeeEEec-CCCCCChHHhCCCCCceEEEEEeCCHHHHHHHHhCCCccceEEEEcCCHHHHHHHHHhcCcceEE
Confidence            45677776 55567889999999965   678899999999999999999999999999999999999999985

NADP+-dependent, gamma-glutamyl-gamma-aminobutyraldehyde dehydrogenase (GABALDH) PuuC of Escherichia coli which catalyzes the conversion of putrescine to 4-aminobutanoate and other similar sequences are present in this CD.

>KOG2454|consensus

Probab=98.81  E-value=4.9e-09  Score=99.80  Aligned_cols=146  Identities=21%  Similarity=0.378  Sum_probs=104.3

Q ss_pred             CCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCH
Q psy5844         291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSI  359 (442)
Q Consensus       291 ~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~  359 (442)
                      .+....+.+...+-....+.    .|..+.+-..++++..+++.+..........+           +|.++.-.+++.+
T Consensus       310 ~dda~l~~v~si~mRGtfQS----sGQNCiGiER~iv~k~~Yd~~i~~l~~rv~s~r~G~~~~~~vDMGAm~s~nrfdhL  385 (583)
T KOG2454|consen  310 CDDADLSHVASIAMRGTFQS----SGQNCIGIERFIVHKDIYDAFIGQLTKRVKSVRAGPPLTGRVDMGAMCSQNRFDHL  385 (583)
T ss_pred             eccccHHHHHHHHHhhhhhh----cCCcccceeEEEEecchHHHHHHHHHHHHHHHHcCCCccCccchhhhhhccchHHH
Confidence            34455666655543322221    22233333457888888887765443222221           5677888888888


Q ss_pred             HHHHHHHhcC------------------CCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccce
Q psy5844         360 EEVIERANNS------------------DYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLA  418 (442)
Q Consensus       360 ~eai~~an~~------------------~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~  418 (442)
                      +..++.+-+.                  +..+.+++.- |...-+++++++-||++   +...+++++++++|+++|||+
T Consensus       386 esLv~DAv~KGArl~~gGsrF~Hpkyp~g~YF~PTlLv-dvt~eMKIaqeE~FgPI~~im~ak~~eh~i~lAN~s~fgLG  464 (583)
T KOG2454|consen  386 ESLVNDAVDKGARLAVGGSRFGHPKYPVGQYFPPTLLV-DVTHEMKIAQEEAFGPIMPIMQAKTDEHVIKLANDSRFGLG  464 (583)
T ss_pred             HHHHHHHHhhcchhhhcccccCCCCCCcccccCCeEEE-ecCchhhhHhhhccccchhhhhcCChHHHHhhccCCccccc
Confidence            8888776321                  2224566666 77888999999999976   557899999999999999999


Q ss_pred             eEEeccChhHHHHHHcccccccc
Q psy5844         419 AAVFTKDLDKTNYVTQGLRAGTV  441 (442)
Q Consensus       419 ~~vft~d~~~~~~~~~~l~~G~v  441 (442)
                      ++||++|+++++|++.+|++|+|
T Consensus       465 ~sVFg~dk~~c~y~a~~lqtG~v  487 (583)
T KOG2454|consen  465 CSVFGGDKHRCKYIASQLQTGVV  487 (583)
T ss_pred             ceeccccHHHHHHHHhhhhccce
Confidence            99999999999999999999987

>cd07087 ALDH_F3-13-14_CALDH-like ALDH subfamily: Coniferyl aldehyde dehydrogenase, ALDH families 3, 13, and 14, and other related proteins

Probab=98.80  E-value=5.3e-09  Score=106.67  Aligned_cols=121  Identities=17%  Similarity=0.281  Sum_probs=91.8

Q ss_pred             CCCCcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHh--------cCCCCceEEEecCCC
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERAN--------NSDYGLAAAVFTKDL  382 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an--------~~~~gl~~~v~s~d~  382 (442)
                      .....||+..++++|...+....+.          .+||++.-..++.+.+.++.+.        ..++.+.++|+. +.
T Consensus       242 a~~rv~V~~~i~d~f~~~L~~~~~~l~~~~~~~~~~~gpli~~~~~~~~~~~i~~a~v~~gg~~~~~g~~~~Ptvl~-~~  320 (426)
T cd07087         242 APDYVLVHESIKDELIEELKKAIKEFYGEDPKESPDYGRIINERHFDRLASLLDDGKVVIGGQVDKEERYIAPTILD-DV  320 (426)
T ss_pred             cCCEEEEcHHHHHHHHHHHHHHHHHHcCCCCccCCCcCCCCCHHHHHHHHHHHhcceEEeCCccCCCCCEEeeEEEe-cC
Confidence            3345677877777766665443333          2577777666666666665431        124456788886 44


Q ss_pred             ChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         383 DKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       383 ~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       321 ~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~g~v~  383 (426)
T cd07087         321 SPDSPLMQEEIFGPILPILTYDDLDEAIEFINSRPKPLALYLFSEDKAVQERVLAETSSGGVC  383 (426)
T ss_pred             CCCCHHHhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHhcCCcccEE
Confidence            566788999999964   678999999999999999999999999999999999999999985

ALDH subfamily which includes NAD(P)+-dependent, aldehyde dehydrogenase, family 3 member A1 and B1 (ALDH3A1, ALDH3B1, EC=1.2.1.5) and fatty aldehyde dehydrogenase, family 3 member A2 (ALDH3A2, EC=1.2.1.3), and also plant ALDH family members ALDH3F1, ALDH3H1, and ALDH3I1, fungal ALDH14 (YMR110C) and the protozoan family 13 member (ALDH13), as well as coniferyl aldehyde dehydrogenases (CALDH, EC=1.2.1.68), and other similar sequences, such as the Pseudomonas putida benzaldehyde dehydrogenase I that is involved in the metabolism of mandelate.

>cd07109 ALDH_AAS00426 Uncharacterized Saccharopolyspora spinosa aldehyde dehydrogenase (AAS00426)-like

Probab=98.80  E-value=7.3e-09  Score=106.68  Aligned_cols=120  Identities=27%  Similarity=0.435  Sum_probs=92.0

Q ss_pred             CCCcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHhc-----------------CCCCce
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERANN-----------------SDYGLA  374 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an~-----------------~~~gl~  374 (442)
                      ....+|+..+++.|...+....++          .+||+++-..++.+.+.++.+..                 .++.+.
T Consensus       263 ~~rv~V~~~i~~~f~~~l~~~~~~~~~G~p~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~~~~g~~~~  342 (454)
T cd07109         263 GSRLLVHRSIYDEVLERLVERFRALRVGPGLEDPDLGPLISAKQLDRVEGFVARARARGARIVAGGRIAEGAPAGGYFVA  342 (454)
T ss_pred             CcEEEEcHHHHHHHHHHHHHHHHhCCCCCCcccCcCCCccCHHHHHHHHHHHHHHHhCCCEEEeCCCcCcccCCCCcEEC
Confidence            344577777776666555433222          36888887778887777776521                 122356


Q ss_pred             EEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         375 AAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       375 ~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++|++ +....+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.|+
T Consensus       343 Ptvl~-~~~~~~~~~~eE~fgPvl~v~~~~~~deAi~~~n~~~~gL~~~i~t~d~~~~~~~~~~l~~g~v~  412 (454)
T cd07109         343 PTLLD-DVPPDSRLAQEEIFGPVLAVMPFDDEAEAIALANGTDYGLVAGVWTRDGDRALRVARRLRAGQVF  412 (454)
T ss_pred             cEEEe-cCCCCChhhhCCCCCceEEEEecCCHHHHHHHhhCCCCCceEEEECCCHHHHHHHHHhcCcCeEE
Confidence            77876 55667889999999975   668899999999999999999999999999999999999999885

Uncharacterized aldehyde dehydrogenase of Saccharopolyspora spinosa (AAS00426) and other similar sequences, are present in this CD.

>cd07084 ALDH_KGSADH-like ALDH subfamily: NAD(P)+-dependent alpha-ketoglutaric semialdehyde dehydrogenases and plant delta(1)-pyrroline-5-carboxylate dehydrogenase, ALDH family 12-like

Probab=98.80  E-value=5.8e-09  Score=106.81  Aligned_cols=119  Identities=18%  Similarity=0.240  Sum_probs=88.0

Q ss_pred             CCcccccc-eeccCcchhHHHHHhh------cCCcccccccCCHHHHHHHH--h------c---------CCCCceEEEe
Q psy5844         323 KGFYVQPT-VFANVRDDMKIAREEI------FGPVQQLIRFSSIEEVIERA--N------N---------SDYGLAAAVF  378 (442)
Q Consensus       323 ~g~~v~pt-i~~~~~~~~~~~~~e~------fgPvl~v~~~~~~~eai~~a--n------~---------~~~gl~~~v~  378 (442)
                      ...+|+.. +++.|...+....+++      +||++.-...+.++++++..  +      .         .++.+.++|+
T Consensus       246 ~rl~V~~~~i~~~f~~~l~~~~~~~~~g~~~~gpl~~~~~~~~i~~a~~~gga~~~~gg~~~~~~~~~~~~g~~~~Ptvl  325 (442)
T cd07084         246 SMLFVPENWSKTPLVEKLKALLARRKLEDLLLGPVQTFTTLAMIAHMENLLGSVLLFSGKELKNHSIPSIYGACVASALF  325 (442)
T ss_pred             cEEEEeCCccHHHHHHHHHHHHHhcccCccccChhhhHHHHHHHHHHHhcCCcEEEeCCcccccCCCCCcCCcccCCeEE
Confidence            44688888 7777766654444443      56765544444456665541  0      0         1345788888


Q ss_pred             cCCCChh---hhhccccEeeeE---EeeCC--HHHHHHhhccCCccceeEEeccChhHHHHHHccc-cccccC
Q psy5844         379 TKDLDKT---NYVTQGLRAGTL---IRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL-RAGTVW  442 (442)
Q Consensus       379 s~d~~~~---~~~~~~~~~G~V---~vN~~--~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l-~~G~v~  442 (442)
                      .+ .+..   ..+++++.||+|   +.+++  .+|+++.+|+++|||+++|||+|..+++++++++ ++|+||
T Consensus       326 ~~-~~~~~~~~~i~~eE~FGPvl~v~~~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~~G~v~  397 (442)
T cd07084         326 VP-IDEILKTYELVTEEIFGPFAIVVEYKKDQLALVLELLERMHGSLTAAIYSNDPIFLQELIGNLWVAGRTY  397 (442)
T ss_pred             Ee-cCcccccchHHheeccCceEEEEEeCCccHHHHHHHHHhCCCCeeEEEEeCCHHHHHHHHHHHHhcCeEE
Confidence            74 3444   389999999976   55777  9999999999999999999999999999999999 999986

ALDH subfamily which includes the NAD(P)+-dependent, alpha-ketoglutaric semialdehyde dehydrogenases (KGSADH, EC 1.2.1.26); plant delta(1)-pyrroline-5-carboxylate dehydrogenase (P5CDH, EC=1.5.1.12 ), ALDH family 12; the N-terminal domain of the MaoC (monoamine oxidase C) dehydratase regulatory protein; and orthologs of MaoC, PaaZ and PaaN, which are putative ring-opening enzymes of the aerobic phenylacetic acid catabolic pathway.

>cd07121 ALDH_EutE Ethanolamine utilization protein EutE-like

Probab=98.80  E-value=3.3e-09  Score=107.90  Aligned_cols=126  Identities=13%  Similarity=0.124  Sum_probs=87.9

Q ss_pred             EEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhc-------------------CCCC
Q psy5844         312 QLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANN-------------------SDYG  372 (442)
Q Consensus       312 ~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~-------------------~~~g  372 (442)
                      ....|..+......+||..|++++...+..   + -.+++.-..++.+.+.++.+..                   .++.
T Consensus       233 ~~n~GQ~C~a~~rv~V~~~i~d~f~~~L~~---~-~~~~i~~~~~~~v~~~i~~a~~~~~ga~~~~gg~~~~~~~~~G~~  308 (429)
T cd07121         233 SFDNNLPCIAEKEVIAVDSVADYLIAAMQR---N-GAYVLNDEQAEQLLEVVLLTNKGATPNKKWVGKDASKILKAAGIE  308 (429)
T ss_pred             cccCCCCCCccceEEEeHHHHHHHHHHHHH---C-CCEEcCHHHHHHHHHhhcccCCCccccccccCcCHHHHHHHcCCC
Confidence            333444444455678888888877765432   2 2334443334333333322111                   1222


Q ss_pred             ce---EEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccc--eeEEeccChhHHHHHHccccccccC
Q psy5844         373 LA---AAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGL--AAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~---~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl--~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ..   +++++ +.+..+.+++++.||+|   +.+++.+||++.+|++.|||  +++|||+|.+++.+++++|++|+||
T Consensus       309 ~~~~~ptil~-~v~~~~~i~~eE~FgPVl~v~~~~~~~eAi~~an~~~~GLghsa~I~t~d~~~a~~~a~~l~aG~v~  385 (429)
T cd07121         309 VPADIRLIIV-ETDKDHPFVVEEQMMPILPVVRVKNFDEAIELAVELEHGNRHTAIIHSKNVENLTKMARAMQTTIFV  385 (429)
T ss_pred             CCCCCeEEEE-ecCCCCCccccccccceEEEEEeCCHHHHHHHHHhhccCCCceEEEecCCHHHHHHHHhhCCceEEE
Confidence            22   47776 55677899999999975   66889999999999999999  9999999999999999999999986

Coenzyme A acylating aldehyde dehydrogenase (ACDH), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, acetylating (EC=1.2.1.10), converts acetaldehyde into acetyl-CoA. This CD is limited to such monofunctional enzymes as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium. Mutations in eutE abolish the ability to utilize ethanolamine as a carbon source.

>cd07149 ALDH_y4uC Uncharacterized ALDH (y4uC) with similarity to Tortula ruralis aldehyde dehydrogenase ALDH21A1

Probab=98.79  E-value=7.2e-09  Score=106.75  Aligned_cols=119  Identities=28%  Similarity=0.371  Sum_probs=89.9

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------CCCCceEEEecC
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFTK  380 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s~  380 (442)
                      +..||+..+++.|...+......           .+||+++-..++.+++.++.+..           .++.+.+++++ 
T Consensus       268 ~~v~V~~~i~d~f~~~L~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~g~~~~Ptvl~-  346 (453)
T cd07149         268 QRIFVHEDIYDEFLERFVAATKKLVVGDPLDEDTDVGPMISEAEAERIEEWVEEAVEGGARLLTGGKRDGAILEPTVLT-  346 (453)
T ss_pred             ceEEEcHhHHHHHHHHHHHHHHhCCcCCCCCCCCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCeEEcCEEEe-
Confidence            34566766766665554433322           26788887777777777776521           12345668887 


Q ss_pred             CCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         381 DLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       381 d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+..+.+.+++.||+|   +..++.+|+++.+|+++|||++||||+|..++.++++++++|.||
T Consensus       347 ~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gLt~~v~t~d~~~~~~~~~~l~~g~v~  411 (453)
T cd07149         347 DVPPDMKVVCEEVFAPVVSLNPFDTLDEAIAMANDSPYGLQAGVFTNDLQKALKAARELEVGGVM  411 (453)
T ss_pred             CCCCCCHHHhCCCCCceEEEEEeCCHHHHHHHHhCCCcCceEEEEcCCHHHHHHHHHHcCcCeEE
Confidence            44456788889999975   668899999999999999999999999999999999999999986

Uncharacterized aldehyde dehydrogenase (ORF name y4uC) with sequence similarity to the moss Tortula ruralis aldehyde dehydrogenase ALDH21A1 (RNP123) believed to play an important role in the detoxification of aldehydes generated in response to desiccation- and salinity-stress, and similar sequences are included in this CD.

>PRK15398 aldehyde dehydrogenase EutE; Provisional

Probab=98.78  E-value=7e-09  Score=106.49  Aligned_cols=128  Identities=13%  Similarity=0.148  Sum_probs=93.7

Q ss_pred             CCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHh-----------------cCCCC
Q psy5844         310 GAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERAN-----------------NSDYG  372 (442)
Q Consensus       310 Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an-----------------~~~~g  372 (442)
                      |+....|..+......+||..|+++|...+..   + ..|++.-..++.+.+.++...                 ..++.
T Consensus       263 g~~~n~GQ~C~A~~rvlV~~si~d~f~~~l~~---~-~~~li~~~~~~~v~~~l~~~~~~~~~~~~g~~~~~i~~~~G~~  338 (465)
T PRK15398        263 GASFDNNLPCIAEKEVIVVDSVADELMRLMEK---N-GAVLLTAEQAEKLQKVVLKNGGTVNKKWVGKDAAKILEAAGIN  338 (465)
T ss_pred             hcccCCCCcCCCCceEEEeHHHHHHHHHHHHH---c-CCccCCHHHHHHHHHHHhhcccccchhhhCCCHHHHHHhCCCC
Confidence            33344444454555679999999887765542   2 567777666666666654211                 01211


Q ss_pred             c---eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccc--eeEEeccChhHHHHHHccccccccC
Q psy5844         373 L---AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGL--AAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l---~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl--~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .   ..+|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||  ++||||+|..+++++++++++|+||
T Consensus       339 ~~~~~~tvl~-~v~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~yGL~hs~~IfT~d~~~a~~~a~~l~~G~V~  415 (465)
T PRK15398        339 VPKDTRLLIV-ETDANHPFVVTELMMPVLPVVRVKDVDEAIALAVKLEHGNRHTAIMHSRNVDNLNKMARAIQTSIFV  415 (465)
T ss_pred             CCCCCCEEEe-cCCCCCchhcccccCceEEEEEeCCHHHHHHHHHhcccCCcceEEEecCCHHHHHHHHHhCCceEEE
Confidence            1   245666 56677889999999975   66889999999999999999  9999999999999999999999985

>cd07103 ALDH_F5_SSADH_GabD Mitochondrial succinate-semialdehyde dehydrogenase and ALDH family members 5A1 and 5F1-like

Probab=98.77  E-value=1e-08  Score=105.49  Aligned_cols=119  Identities=29%  Similarity=0.482  Sum_probs=91.6

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV  377 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v  377 (442)
                      +..+|+..+++.|...+....+++           +||++.-..++.+.+.++.+..              .++.+.++|
T Consensus       264 ~~v~V~~~i~~~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~i~~a~~~ga~~l~gg~~~~~~g~~~~Pti  343 (451)
T cd07103         264 NRIYVHESIYDEFVEKLVERVKKLKVGNGLDEGTDMGPLINERAVEKVEALVEDAVAKGAKVLTGGKRLGLGGYFYEPTV  343 (451)
T ss_pred             eeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCcCcCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCcEECCEE
Confidence            445777777776665554333332           5788777777777777665421              233467788


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +. +.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|.|+
T Consensus       344 l~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~  410 (451)
T cd07103         344 LT-DVTDDMLIMNEETFGPVAPIIPFDTEDEVIARANDTPYGLAAYVFTRDLARAWRVAEALEAGMVG  410 (451)
T ss_pred             ee-CCCCcCHHHhCCCCCceEEEEEECCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            87 55667889999999975   668999999999999999999999999999999999999999985

Succinate-semialdehyde dehydrogenase, mitochondrial (SSADH, GabD, EC=1.2.1.24) catalyzes the NAD+-dependent oxidation of succinate semialdehyde (SSA) to succinate. This group includes the human aldehyde dehydrogenase family 5 member A1 (ALDH5A1) which is a mitochondrial homotetramer that converts SSA to succinate in the last step of 4-aminobutyric acid (GABA) catabolism. This CD also includes the Arabidopsis SSADH gene product ALDH5F1. Mutations in this gene result in the accumulation of H2O2, suggesting a role in plant defense against the environmental stress of elevated reactive oxygen species.

>PF00171 Aldedh: Aldehyde dehydrogenase family; InterPro: IPR015590 Aldehyde dehydrogenases (1

Probab=98.76  E-value=3.1e-09  Score=109.63  Aligned_cols=118  Identities=24%  Similarity=0.468  Sum_probs=91.5

Q ss_pred             CcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc-----------------CCCCceE
Q psy5844         324 GFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN-----------------SDYGLAA  375 (442)
Q Consensus       324 g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~-----------------~~~gl~~  375 (442)
                      ..+|+..++++|...+....+.+           +||++....++...+.++.+..                 .++.+.+
T Consensus       274 ~v~V~~~i~~~f~~~l~~~~~~l~~g~~~~~~~~~gpl~~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~g~~~~P  353 (462)
T PF00171_consen  274 RVLVHESIYDEFVEALKERVAKLRVGDPLDESTDVGPLISKAQRERVKALIEDAVAEGAKVLCGGEPQEADPENGFFIPP  353 (462)
T ss_dssp             EEEEEHHHHHHHHHHHHHHHHTSEBSSTTSTTCSBCHCSSHHHHHHHHHHHHHHHHTTSEEEEETSSSSBCSSSSTEEEE
T ss_pred             cccccccccchhhhhhhhccccccccCCccccccccccccchhhhhcccccccccccccccccccccccccccccccccc
Confidence            35667777666665554433332           5777777777777777776532                 2344688


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|.+++.++++++++|.||
T Consensus       354 tvl~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gl~a~v~s~d~~~~~~~~~~l~~g~v~  422 (462)
T PF00171_consen  354 TVLE-DVPPDMPIMQEEIFGPVLPVVPYDDLDEAIALANDSEYGLTASVFSRDESRAERLARRLEAGRVW  422 (462)
T ss_dssp             EEEE-SEHTTSHHHHSC-SSSEEEEEEESSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHSTSSEEE
T ss_pred             cccc-cccccccccccccccccceecccccchhhhhcccccCCCceeEEeccccccccccccccccccee
Confidence            8887 67777899999999975   778999999999999999999999999999999999999999985

2.1.3 from EC and 1.2.1.5 from EC) are enzymes that oxidize a wide variety of aliphatic and aromatic aldehydes using NADP as a cofactor. In mammals at least four different forms of the enzyme are known []: class-1 (or Ald C) a tetrameric cytosolic enzyme, class-2 (or Ald M) a tetrameric mitochondrial enzyme, class- 3 (or Ald D) a dimeric cytosolic enzyme, and class IV a microsomal enzyme. Aldehyde dehydrogenases have also been sequenced from fungal and bacterial species. A number of enzymes are known to be evolutionary related to aldehyde dehydrogenases. A glutamic acid and a cysteine residue have been implicated in the catalytic activity of mammalian aldehyde dehydrogenase. These residues are conserved in all the enzymes of this entry. Some of the proteins in this entry are allergens. Allergies are hypersensitivity reactions of the immune system to specific substances called allergens (such as pollen, stings, drugs, or food) that, in most people, result in no symptoms. A nomenclature system has been established for antigens (allergens) that cause IgE-mediated atopic allergies in humans [WHO/IUIS Allergen Nomenclature Subcommittee King T.P., Hoffmann D., Loewenstein H., Marsh D.G., Platts-Mills T.A.E., Thomas W. Bull. World Health Organ. 72:797-806(1994)]. This nomenclature system is defined by a designation that is composed of the first three letters of the genus; a space; the first letter of the species name; a space and an arabic number. In the event that two species names have identical designations, they are discriminated from one another by adding one or more letters (as necessary) to each species designation. The allergens in this family include allergens with the following designations: Alt a 10 and Cla h 3.; GO: 0016491 oxidoreductase activity, 0008152 metabolic process, 0055114 oxidation-reduction process; PDB: 3R31_A 3HAZ_A 1UXQ_A 1UXP_A 1UXR_A 1UXU_A 1UXN_A 1KY8_A 1UXT_A 1UXV_A ....

>TIGR01238 D1pyr5carbox3 delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain)

Probab=98.76  E-value=7.9e-09  Score=107.20  Aligned_cols=124  Identities=19%  Similarity=0.284  Sum_probs=94.5

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc----------------
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN----------------  368 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~----------------  368 (442)
                      |..|......||+..+++.|...+....+++           +||++.-..++.+.+.++.+..                
T Consensus       303 GQ~C~a~~rv~V~~~i~d~f~~~L~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~~~~~i~~a~~~Ga~l~~~~~~~~~~~  382 (500)
T TIGR01238       303 GQRCSALRVLCVQEDVADRVLTMIQGAMQELKVGVPHLLTTDVGPVIDAEAKQNLLAHIEHMSQTQKKIAQLTLDDSRAC  382 (500)
T ss_pred             CCCCCCCceeEEcHhhHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEeeccCCCCCC
Confidence            3334444557899999888877765544443           5888888888888777765421                


Q ss_pred             -CCCCceEEEecCCCChhhhhccccEeeeE---EeeC--CHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         369 -SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       369 -~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~--~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                       .++.+.++|++.   ..+.+++++.||+|   +.++  +.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       383 ~~g~f~~PTvl~~---~~~~~~~eE~FgPvl~v~~~~~~~~deai~~~N~~~~gLs~~vfT~d~~~~~~~~~~l~~G~v~  459 (500)
T TIGR01238       383 QHGTFVAPTLFEL---DDIAELSEEVFGPVLHVVRYKARELDQIVDQINQTGYGLTMGVHSRIETTYRWIEKHARVGNCY  459 (500)
T ss_pred             CCCeeEcCEEEcc---CCchHhhCCCcCCEEEEEEeCCCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCcceEE
Confidence             134466788863   24567899999975   4454  68999999999999999999999999999999999999985

This model represents one of several related branches of delta-1-pyrroline-5-carboxylate dehydrogenase. Members of this branch are the C-terminal domain of the PutA bifunctional proline dehydrogenase / delta-1-pyrroline-5-carboxylate dehydrogenase.

>cd07093 ALDH_F8_HMSADH Human aldehyde dehydrogenase family 8 member A1-like

Probab=98.74  E-value=1.5e-08  Score=104.50  Aligned_cols=121  Identities=31%  Similarity=0.469  Sum_probs=94.2

Q ss_pred             CCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhcC------------------CC
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANNS------------------DY  371 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~~------------------~~  371 (442)
                      ..+..+|+..+++.|...+....++           .+||++.-..++.+.+.++.+...                  ++
T Consensus       262 a~~~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~gg~~~~~~~~~~~~  341 (455)
T cd07093         262 AGSRILVQRSIYDEFLERFVERAKALKVGDPLDPDTEVGPLISKEHLEKVLGYVELARAEGATILTGGGRPELPDLEGGY  341 (455)
T ss_pred             CCceEEEcHHHHHHHHHHHHHHHHhCCCCCCCCCCCCcCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCCccccccCCCCc
Confidence            3345688888887777666544433           268888877778887777765311                  33


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.+++++ +....+.+.+++.||+|   +..++.+|+++.+|+++|||++++||+|..++.++++++++|.|+
T Consensus       342 ~~~Ptvl~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~gls~~i~t~d~~~~~~~~~~l~~g~v~  414 (455)
T cd07093         342 FVEPTVIT-GLDNDSRVAQEEIFGPVVTVIPFDDEEEAIELANDTPYGLAAYVWTRDLGRAHRVARRLEAGTVW  414 (455)
T ss_pred             eECCEEEe-cCCCCChHHhCCCCCceEEEEeeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            35678876 45567788999999965   668899999999999999999999999999999999999999885

In humans, the aldehyde dehydrogenase family 8 member A1 (ALDH8A1) protein functions to convert 9-cis-retinal to 9-cis-retinoic acid and has a preference for NAD+. Also included in this CD is the 2-hydroxymuconic semialdehyde dehydrogenase (HMSADH) which catalyzes the conversion of 2-hydroxymuconic semialdehyde to 4-oxalocrotonate, a step in the meta cleavage pathway of aromatic hydrocarbons in bacteria. Such HMSADHs seen here are: XylG of the TOL plasmid pWW0 of Pseudomonas putida, TomC of Burkholderia cepacia G4, and AphC of Comamonas testosterone.

>PF07368 DUF1487: Protein of unknown function (DUF1487); InterPro: IPR009961 This family consists of several uncharacterised proteins from Drosophila melanogaster

Probab=98.74  E-value=9.4e-08  Score=85.86  Aligned_cols=165  Identities=19%  Similarity=0.141  Sum_probs=122.9

Q ss_pred             CCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHH
Q psy5844         218 KSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMD  297 (442)
Q Consensus       218 ~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~  297 (442)
                      ..-+||++|.|++.|+..++.+.-..-|  ..+.-.|+|||++.|+|++++..+++.+      ++..     -+...+.
T Consensus         5 P~lMIvfe~GDlnsA~~~L~~sl~~Pf~--~~~VatVlVqEsireefi~rvr~~m~pl------~~~v-----a~Hpny~   71 (215)
T PF07368_consen    5 PQLMIVFEDGDLNSAMHYLLESLHNPFA--PGAVATVLVQESIREEFIERVRSRMKPL------SPQV-----ANHPNYL   71 (215)
T ss_pred             CeEEEEEeCCCHHHHHHHHHHHHhCccc--CCcEEEEEEeHHHHHHHHHHHHHhCccC------Chhh-----ccCcHHH
Confidence            3458999999999999999999876665  5688899999999999999999888644      2221     2223344


Q ss_pred             HHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcC-CCCceEE
Q psy5844         298 KILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNS-DYGLAAA  376 (442)
Q Consensus       298 ~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~-~~gl~~~  376 (442)
                      +..+.+   ..-+++.+.+....  .-..-.|.++.++.....   -.--.+|+++..|++..|++++.+.. -.+-+.+
T Consensus        72 rsl~~i---~~l~~~~I~~~~~~--~~~~aSPilV~d~~h~~f---g~~PTgViTlhtFRt~~Ea~~l~~kE~l~f~SVs  143 (215)
T PF07368_consen   72 RSLKKI---KCLNAKTIVADFEN--VPPPASPILVCDFTHSYF---GDGPTGVITLHTFRTPKEAIELCAKETLPFDSVS  143 (215)
T ss_pred             HHHHHH---HhcCCeEEEecccC--CCCCCCCEEEcCCCHHHc---CCCCCeEEEEEccCCHHHHHHHHhcCCCCcceEE
Confidence            444444   34688888873321  123446888887765321   12224599999999999999999864 3456889


Q ss_pred             EecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||++....+.+++..+.+..+++|+..
T Consensus       144 iW~ekla~~Yel~~~l~~~~f~iNC~~  170 (215)
T PF07368_consen  144 IWNEKLASAYELAARLPCDTFYINCFN  170 (215)
T ss_pred             EeCcHHHHHHHHHHhCCCCEEEEEecc
Confidence            999999999999999999999999753

The function of this family is unknown.

>cd07082 ALDH_F11_NP-GAPDH NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase and ALDH family 11

Probab=98.73  E-value=1.7e-08  Score=104.52  Aligned_cols=119  Identities=27%  Similarity=0.344  Sum_probs=89.4

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhcC------------CCCceEEEec
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANNS------------DYGLAAAVFT  379 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~~------------~~gl~~~v~s  379 (442)
                      ...+++..+++++...+....++           .+||++.-..++.+.+.++.+...            ++.+.++++.
T Consensus       286 ~~v~v~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~ga~~~~gg~~~~g~~~~Ptvl~  365 (473)
T cd07082         286 KRVLVHESVADELVELLKEEVAKLKVGMPWDNGVDITPLIDPKSADFVEGLIDDAVAKGATVLNGGGREGGNLIYPTLLD  365 (473)
T ss_pred             eEEEEcHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCeEEeeEEEe
Confidence            44577777776665554433332           257777776677766666654211            3456678887


Q ss_pred             CCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         380 KDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       380 ~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                       +....+.+.+++.||+|   +..++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       366 -~~~~~~~~~~eE~fgPvl~v~~~~~~~eai~~~n~~~~gL~~~v~t~d~~~~~~~~~~l~~G~v~  430 (473)
T cd07082         366 -PVTPDMRLAWEEPFGPVLPIIRVNDIEEAIELANKSNYGLQASIFTKDINKARKLADALEVGTVN  430 (473)
T ss_pred             -cCCCCCHHHhCcCcCceEEEEEeCCHHHHHHHHhCCCCCceEEEEeCCHHHHHHHHHhCCcceEE
Confidence             45556788888999865   668899999999999999999999999999999999999999986

NADP+-dependent non-phosphorylating glyceraldehyde 3-phosphate dehydrogenase (NP-GAPDH, EC=1.2.1.9) catalyzes the irreversible oxidation of glyceraldehyde 3-phosphate to 3-phosphoglycerate generating NADPH for biosynthetic reactions. This CD also includes the Arabidopsis thaliana osmotic-stress-inducible ALDH family 11, ALDH11A3 and similar sequences. In autotrophic eukaryotes, NP-GAPDH generates NADPH for biosynthetic processes from photosynthetic glyceraldehyde-3-phosphate exported from the chloroplast and catalyzes one of the classic glycolytic bypass reactions unique to plants.

>cd07129 ALDH_KGSADH Alpha-Ketoglutaric Semialdehyde Dehydrogenase

Probab=98.70  E-value=3.3e-08  Score=101.69  Aligned_cols=122  Identities=14%  Similarity=0.096  Sum_probs=89.6

Q ss_pred             CCCCcccccc-eeccCcchhHHHHHhh-cCCcccccccCC----HHHHHHH--Hh--------cCCCCceEEEecCCCC-
Q psy5844         321 GDKGFYVQPT-VFANVRDDMKIAREEI-FGPVQQLIRFSS----IEEVIER--AN--------NSDYGLAAAVFTKDLD-  383 (442)
Q Consensus       321 ~~~g~~v~pt-i~~~~~~~~~~~~~e~-fgPvl~v~~~~~----~~eai~~--an--------~~~~gl~~~v~s~d~~-  383 (442)
                      ..+..||+.. ++++|...+....+.+ .||.+.-...+.    ++++++.  ++        ..++.+.++|+..+.+ 
T Consensus       261 a~~rv~v~~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~~~~~~i~~a~~~~ga~~l~gg~~~~~g~~~~Ptvl~~~~~~  340 (454)
T cd07129         261 NPGLVLVPAGPAGDAFIAALAEALAAAPAQTMLTPGIAEAYRQGVEALAAAPGVRVLAGGAAAEGGNQAAPTLFKVDAAA  340 (454)
T ss_pred             CCceEEEeCcccHHHHHHHHHHHHhccCCCCCcChHHHHHHHHHHHHHHhcCCcEEEeCCCcCCCCCccCCEEEEccCCc
Confidence            3345788988 8988887776555554 366555333333    3444443  10        0144567888874443 


Q ss_pred             -hhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccC--hhHHHHHHccc--cccccC
Q psy5844         384 -KTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKD--LDKTNYVTQGL--RAGTVW  442 (442)
Q Consensus       384 -~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d--~~~~~~~~~~l--~~G~v~  442 (442)
                       ..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|  ..++.+++++|  ++|+||
T Consensus       341 ~~~~~i~~~E~FGPv~~v~~~~~~~eai~~~n~~~~gL~a~vft~d~~~~~a~~~~~~l~~~~G~v~  407 (454)
T cd07129         341 FLADPALQEEVFGPASLVVRYDDAAELLAVAEALEGQLTATIHGEEDDLALARELLPVLERKAGRLL  407 (454)
T ss_pred             cccchhhcccCCCCeEEEEEeCCHHHHHHHHhcCCCCcEEEEEccCchHHHHHHHHHHHHhhCcEEE
Confidence             56789999999975   6689999999999999999999999999  89999999999  599985

Alpha-Ketoglutaric Semialdehyde (KGSA) Dehydrogenase (KGSADH, EC 1.2.1.26) catalyzes the NAD(P)+-dependent conversion of KGSA to alpha-ketoglutarate. This CD contains such sequences as those seen in Azospirillum brasilense, KGSADH-II (D-glucarate/D-galactarate-inducible) and KGSADH-III (hydroxy-L-proline-inducible). Both show similar high substrate specificity for KGSA and different coenzyme specificity; KGSADH-II is NAD+-dependent and KGSADH-III is NADP+-dependent. Also included in this CD is the NADP(+)-dependent aldehyde dehydrogenase from Vibrio harveyi which catalyzes the oxidation of long-chain aliphatic aldehydes to acids.

>PRK11905 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.68  E-value=1.3e-07  Score=106.65  Aligned_cols=101  Identities=21%  Similarity=0.168  Sum_probs=81.9

Q ss_pred             cccCCCcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecC
Q psy5844          91 IPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG  170 (442)
Q Consensus        91 ~~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~  170 (442)
                      ++-|+|+.+.++..|+|+++||+|||   ..++.++..||++||+||+||++.++.       .+.  .+|..+.+.+  
T Consensus      1064 LPGPTGEsN~L~l~~RG~vlcisp~~---~~~l~Qi~AALaaGn~vi~~~~~~~~~-------~~~--~Lp~~~~~~~-- 1129 (1208)
T PRK11905       1064 LPGPTGESNLLSLHPRGRVLCVADTE---EALLRQLAAALATGNVAVVAADSGLAA-------ALA--DLPGLVAARI-- 1129 (1208)
T ss_pred             CCCCCCcceeEEecCCceEEEECCcH---HHHHHHHHHHHHhCCEEEEeCCcccHH-------HHH--hCcccccccc--
Confidence            34449999999999999999999999   557889999999999999999988652       221  3566555544  


Q ss_pred             CccchhhhhcCCCccEEeecCCHHHHHHHHhhccCCC
Q psy5844         171 YGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASN  207 (442)
Q Consensus       171 ~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~  207 (442)
                        ..+..+..++.++.|.|+|++...+.+.+.++++.
T Consensus      1130 --~~~~~~~~~~~i~~V~~~G~~~~a~~i~~~LA~R~ 1164 (1208)
T PRK11905       1130 --DWTQDWEADDPFAGALLEGDAERARAVRQALAARP 1164 (1208)
T ss_pred             --ccccccccCCcccEEEEeCCHHHHHHHHHHHHhCC
Confidence              24456778888999999999999999999888654

>cd07122 ALDH_F20_ACDH Coenzyme A acylating aldehyde dehydrogenase (ACDH), ALDH family 20-like

Probab=98.65  E-value=1.3e-08  Score=103.46  Aligned_cols=61  Identities=13%  Similarity=0.234  Sum_probs=52.4

Q ss_pred             CCChhhhhccccEeeeE---EeeCCHHHHHHhhccC----CccceeEEeccChhHHHHHHccccccccC
Q psy5844         381 DLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNS----DYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       381 d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~----~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+..+.+.++ .||+|   +..++.+|+++.+|++    +|||++||||+|..+++++++++++|+||
T Consensus       318 ~v~~~~~~~~E-~FGPVl~v~~~~~~~eAi~~aN~~~~~~~~GLsa~V~T~d~~~a~~~~~~l~aG~V~  385 (436)
T cd07122         318 GVGPEEPLSRE-KLSPVLAFYRAEDFEEALEKARELLEYGGAGHTAVIHSNDEEVIEEFALRMPVSRIL  385 (436)
T ss_pred             CCCCCCcchhc-ccCCeEEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCHHHHHHHHhhCCceEEE
Confidence            44445566654 68975   6688999999999997    89999999999999999999999999986

Coenzyme A acylating aldehyde dehydrogenase (ACDH, EC=1.2.1.10), an NAD+ and CoA-dependent acetaldehyde dehydrogenase, functions as a single enzyme (such as the Ethanolamine utilization protein, EutE, in Salmonella typhimurium) or as part of a multifunctional enzyme to convert acetaldehyde into acetyl-CoA . The E. coli aldehyde-alcohol dehydrogenase includes the functional domains, alcohol dehydrogenase (ADH), ACDH, and pyruvate-formate-lyase deactivase; and the Entamoeba histolytica aldehyde-alcohol dehydrogenase 2 (ALDH20A1) includes the functional domains ADH and ACDH and may be critical enzymes in the fermentative pathway.

>PRK11904 bifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.64  E-value=4.6e-08  Score=108.78  Aligned_cols=123  Identities=22%  Similarity=0.355  Sum_probs=95.7

Q ss_pred             CcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc---------------CC
Q psy5844         317 GGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN---------------SD  370 (442)
Q Consensus       317 g~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~---------------~~  370 (442)
                      ..|......||+..|+++|...+....+++           +||++.-..++.+.+.|+.+..               .+
T Consensus       828 Q~CsA~~rl~V~~si~d~fl~~L~~~~~~l~vGdp~d~~t~~GPvI~~~a~~~l~~~I~~a~~ga~vl~gg~~~~~~~~G  907 (1038)
T PRK11904        828 QRCSALRVLFVQEDIADRVIEMLKGAMAELKVGDPRLLSTDVGPVIDAEAKANLDAHIERMKREARLLAQLPLPAGTENG  907 (1038)
T ss_pred             CccccCcEEEEeHHHHHHHHHHHHHHHHhccCCCcccccCCccCCCCHHHHHHHHHHHHHHHcCCEEEeCCCCCCCCCCc
Confidence            333334457889999988777665554443           6899998888888888887632               24


Q ss_pred             CCceEEEecCCCChhhhhccccEeeeE---EeeC--CHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~--~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+.++|+..+   ...+++++.||+|   +.++  +.+++++.+|+++|||+++|||+|..++.++++++++|.||
T Consensus       908 ~fv~PTvi~~~---~~~~~~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~~IfS~d~~~~~~~~~~l~aG~vy  981 (1038)
T PRK11904        908 HFVAPTAFEID---SISQLEREVFGPILHVIRYKASDLDKVIDAINATGYGLTLGIHSRIEETADRIADRVRVGNVY  981 (1038)
T ss_pred             eEEeeEEEccC---CcHHhCCCCcCcEEEEEEeCCCCHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEEEEE
Confidence            55778888632   3456799999976   4454  57999999999999999999999999999999999999985

>PRK11809 putA trifunctional transcriptional regulator/proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase; Reviewed

Probab=98.56  E-value=1e-07  Score=107.47  Aligned_cols=122  Identities=22%  Similarity=0.263  Sum_probs=95.0

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc-----------------C
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN-----------------S  369 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~-----------------~  369 (442)
                      .|......||+..|++.|...+....+++           +||++.-..++.+++.|+.+..                 .
T Consensus       916 rCsA~~rl~V~e~Iad~fl~~L~~a~~~l~vGdP~~~~tdvGPvId~~a~~~i~~~I~~a~~~G~~v~~g~~~~~~~~~~  995 (1318)
T PRK11809        916 RCSALRVLCLQDDVADRTLKMLRGAMAECRMGNPDRLSTDIGPVIDAEAKANIERHIQAMRAKGRPVFQAARENSEDWQS  995 (1318)
T ss_pred             ccccCcEEEEcHHHHHHHHHHHHHHHHhcCCCCcccccCCcCCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCCCCCC
Confidence            33334557889999888877665554443           6899998888888888886632                 1


Q ss_pred             CCCceEEEecCCCChhhhhccccEeeeE---EeeC--CHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         370 DYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       370 ~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~--~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++.+.++|+..+   ....++++.||+|   +.++  +.+++++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       996 G~fv~PTIi~~~---~~~~l~eEiFGPVL~V~~~~~~~ldeaI~~iN~t~yGLt~gV~Srd~~~~~~v~~~l~aGnvy 1070 (1318)
T PRK11809        996 GTFVPPTLIELD---SFDELKREVFGPVLHVVRYNRNQLDELIEQINASGYGLTLGVHTRIDETIAQVTGSAHVGNLY 1070 (1318)
T ss_pred             CeEEeeEEEecc---chhhhcCcccCceEEEEEeCCCCHHHHHHHHhcCCCCceEEEEeCCHHHHHHHHHhCCEeEEE
Confidence            445678888632   2456889999976   4443  68999999999999999999999999999999999999985

>PLN02418 delta-1-pyrroline-5-carboxylate synthase

Probab=98.54  E-value=1.5e-07  Score=101.32  Aligned_cols=59  Identities=7%  Similarity=0.085  Sum_probs=54.3

Q ss_pred             hhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         384 KTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       384 ~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ..+.+++++.||+|   ..+++.+|||+.+|+++|||+++|||+|..++.+++++|++|+||
T Consensus       589 ~~~~i~~eE~FgPv~~i~~~~~~dEAI~~aN~s~yGLsa~V~T~d~~~a~~~a~~l~aG~V~  650 (718)
T PLN02418        589 PEAQSFHHEYSSLACTVEIVDDVHAAIDHIHRHGSAHTDCIVTEDSEVAEIFLRQVDSAAVF  650 (718)
T ss_pred             CCchhhhCCcCCeeEEEEEECCHHHHHHHHhcCCCCCeeEEEcCCHHHHHHHHHhCCeeEEE
Confidence            44788899999976   458999999999999999999999999999999999999999986

>PRK00197 proA gamma-glutamyl phosphate reductase; Provisional

Probab=98.51  E-value=5.8e-08  Score=98.64  Aligned_cols=106  Identities=14%  Similarity=0.095  Sum_probs=78.8

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeE-
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL-  397 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V-  397 (442)
                      +...+..|||..|+++|...+....+++-.-+.     .+.. . .       ++.++|++    ..+.+++++.||+| 
T Consensus       257 C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~~~~-----~~~~-~-~-------~~~PTi~~----~~~~i~~eE~FGPVl  318 (417)
T PRK00197        257 CNALETLLVHEAIAEEFLPKLAEALAEAGVELR-----GDEA-A-L-------ALLPDVVP----ATEEDWDTEYLDLIL  318 (417)
T ss_pred             cccceEEEEEHHHhHHHHHHHHHHHHHCCCeEe-----cCHH-H-H-------Hhhccccc----CCcchhhhhhhCceE
Confidence            333355799999999888777655555421111     1111 0 0       12277773    23678899999975 


Q ss_pred             --EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         398 --IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       398 --~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                        +.+++.+|+++.+|+++|||++||||+|..+++++++++++|+||
T Consensus       319 ~v~~~~~~deAi~~aN~~~~GL~a~V~t~d~~~~~~~~~~l~~G~v~  365 (417)
T PRK00197        319 AVKVVDSLDEAIAHINRYGSGHTEAIVTEDYAAAERFLNEVDSAAVY  365 (417)
T ss_pred             EEEEeCCHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCeeEEE
Confidence              668999999999999999999999999999999999999999986

>TIGR00407 proA gamma-glutamyl phosphate reductase

Probab=98.51  E-value=1.3e-07  Score=95.15  Aligned_cols=108  Identities=11%  Similarity=0.027  Sum_probs=77.0

Q ss_pred             CCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeE---
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL---  397 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---  397 (442)
                      .....||+..|+++|...+....++. +..+.  .   .+..-+++...+    .+++  +.  .+.+++++.||+|   
T Consensus       247 a~~rv~V~~~v~d~f~~~l~~~~~~~-~~~~~--~---~~~i~~~v~~g~----~tv~--~~--~~~i~~eE~FgPvl~v  312 (398)
T TIGR00407       247 AIETLLVNKAIAREFLPVLENQLLEK-GVTIH--A---DAYALKLLELGP----ATEA--IV--CKTDFDKEFLSLDLSV  312 (398)
T ss_pred             ccceEEEeHHHHHHHHHHHHHHHHhc-CCEEe--c---CHHHHHHHhccC----cccc--cc--ccccccchhhCceeEE
Confidence            33457999999988887765544442 32221  1   122222222211    2343  22  2578899999975   


Q ss_pred             EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         398 IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       398 ~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +..++.+||++.+|+++|||++||||+|..+++++++++++|+||
T Consensus       313 ~~~~~~~eAi~~aN~~~~GL~a~I~t~d~~~a~~~a~~i~~G~v~  357 (398)
T TIGR00407       313 KIVESLEAAIQHINQYGTQHSDAILTENKANAEQFQNGVDSAAVY  357 (398)
T ss_pred             EEECCHHHHHHHHHHhCCCCceEEEeCCHHHHHHHHHhCCeeEEE
Confidence            668999999999999999999999999999999999999999985

The prosite motif begins at residue 332 of the seed alignment although not all of the members of the family exactly obey the motif.

>KOG2452|consensus

Probab=98.47  E-value=1.9e-07  Score=91.22  Aligned_cols=73  Identities=33%  Similarity=0.672  Sum_probs=64.5

Q ss_pred             CCCCceEEEecCCCChhhhhccccEeeeEEee-----CCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         369 SDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRF-----SSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       369 ~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN-----~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+..+.++||| |.+.-+.++.++.||+|++-     ++.+.+++++|+++|||+++|||+|..++.|+++.+++|+|.
T Consensus       761 ~g~~f~pti~s-~i~d~~f~a~eesfgpim~is~f~d~d~~~vl~ran~tefgla~gvftrd~~k~l~v~~~l~agtvf  838 (881)
T KOG2452|consen  761 PGFFFEPTVFT-DVEDHMFIAKEESFGPVMIISRFADGDLDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVF  838 (881)
T ss_pred             CCcccCCeeec-ccchhhhhhhccccCceEEEEecCCCCHHHHHhhccccccccccceeecccchhhhhhhhhccceEE
Confidence            45667889999 88888899999999998663     456788999999999999999999999999999999999973

>TIGR02288 PaaN_2 phenylacetic acid degradation protein paaN

Probab=98.45  E-value=1.9e-07  Score=97.36  Aligned_cols=120  Identities=17%  Similarity=0.248  Sum_probs=86.8

Q ss_pred             CCCcccccc---------eeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHh---c---------CC
Q psy5844         322 DKGFYVQPT---------VFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERAN---N---------SD  370 (442)
Q Consensus       322 ~~g~~v~pt---------i~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an---~---------~~  370 (442)
                      ....||+..         ++++|...+....+.          .+||+++-..++.++++++...   .         .+
T Consensus       342 ~~ri~V~~~~i~~~~g~~i~def~~~L~~~~~~lvGdp~~~~~~~Gplis~~~~~ri~~a~~~G~v~~gG~~~~~~~~~g  421 (551)
T TIGR02288       342 TQAILVPRDGIRTDQGRKSYDEVAADLATAIDGLLGDPARATAVLGAIQSPDTLARIAEARALGEVLLASTKIEHPEFPG  421 (551)
T ss_pred             CCEEEEeccccccccchhHHHHHHHHHHHHHHHhcCCcccccccccCcCCHHHHHHHHHHHhCCCEEEcCccCCCCCCCC
Confidence            344677776         566666555433322          3678888777777777776431   0         12


Q ss_pred             -CCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccC--Ccc-ceeEEeccChhHHHHHHccc-------
Q psy5844         371 -YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNS--DYG-LAAAVFTKDLDKTNYVTQGL-------  436 (442)
Q Consensus       371 -~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~--~yG-l~~~vft~d~~~~~~~~~~l-------  436 (442)
                       +...++|+..+ ...+.+++++.||+|   +.+++.+|+++.+|++  .|| |++||||+|..++.++.+.+       
T Consensus       422 ~~~~~Ptvl~~~-~~d~~i~~eE~FGPVl~V~~~~d~deAi~~aN~~~~~~G~Lta~VfT~d~~~~~~~~~~~~~~~~~l  500 (551)
T TIGR02288       422 ARVRTPLLLKCD-AADEAAYMQERFGPIAFVVAVDDGAHAVELARRSVREKGAMTVGAYTTDPEVVDAVQEAAWDAAVAL  500 (551)
T ss_pred             CEEeccEEEEcC-CCCCHHHhCCCcCCEEEEEEECCHHHHHHHHhcCCCCCCCceEEEEeCCHHHHHHHHHHHHHhccCe
Confidence             23466777422 236788999999975   6689999999999998  666 99999999999999999999       


Q ss_pred             ---cccccC
Q psy5844         437 ---RAGTVW  442 (442)
Q Consensus       437 ---~~G~v~  442 (442)
                         ++|+|+
T Consensus       501 ~iN~~G~v~  509 (551)
T TIGR02288       501 SLNLTGGVF  509 (551)
T ss_pred             eecCCceEE
Confidence               888874

This family includes sequences from Burkholderia, Bordetella, Streptomyces. Other PaaN enzymes are represented by a separate model, TIGR02278.

>cd07079 ALDH_F18-19_ProA-GPR Gamma-glutamyl phosphate reductase (GPR), aldehyde dehydrogenase families 18 and 19

Probab=98.42  E-value=9.5e-08  Score=96.77  Aligned_cols=107  Identities=15%  Similarity=0.095  Sum_probs=78.0

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeE
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL  397 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V  397 (442)
                      .|......|||..|+++|...+....+.. |--+  .  .+- ...       ..+.++     ....+.+++++.||+|
T Consensus       250 ~C~a~~rv~V~~si~d~f~~~l~~~~~~~-ga~~--~--~g~-~~~-------~~~~pt-----v~~d~~i~~eE~FGPV  311 (406)
T cd07079         250 VCNALETLLVHRDIAEEFLPKLAEALREA-GVEL--R--GDE-ETL-------AILPGA-----KPATEEDWGTEYLDLI  311 (406)
T ss_pred             ccccceeEEEeHHHHHHHHHHHHHHHHHC-CCEE--e--cCH-HHH-------Hhcccc-----cCCCcchhhhhhhCce
Confidence            44444567999999998887776544432 2111  0  111 100       011222     3455789999999975


Q ss_pred             ---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         398 ---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       398 ---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                         +.+++.+|+++.+|+++|||++||||+|..+++++++++++|+||
T Consensus       312 l~v~~~~~~deAi~~aN~~~~GLsa~ift~d~~~a~~~~~~~~~G~v~  359 (406)
T cd07079         312 LAVKVVDSLDEAIAHINRYGSGHTEAIVTENYETAERFLREVDSAAVY  359 (406)
T ss_pred             eEEEEeCCHHHHHHHHHHhCCccccEeeeCCHHHHHHHHHhCCeeEEE
Confidence               668999999999999999999999999999999999999999985

Gamma-glutamyl phosphate reductase (GPR), a L-proline biosynthetic pathway (PBP) enzyme that catalyzes the NADPH dependent reduction of L-gamma-glutamyl 5-phosphate into L-glutamate 5-semialdehyde and phosphate. The glutamate route of the PBP involves two enzymatic steps catalyzed by gamma-glutamyl kinase (GK, EC 2.7.2.11) and GPR (EC 1.2.1.41). These enzymes are fused into the bifunctional enzyme, ProA or delta(1)-pyrroline-5-carboxylate synthetase (P5CS) in plants and animals, whereas they are separate enzymes in bacteria and yeast. In humans, the P5CS (ALDH18A1), an inner mitochondrial membrane enzyme, is essential to the de novo synthesis of the amino acids proline and arginine. Tomato (Lycopersicon esculentum) has both the prokaryotic-like polycistronic operons encoding GK and GPR (PRO1, ALDH19) and the full-length, bifunctional P5CS (PRO2, ALDH18B1).

>TIGR02518 EutH_ACDH acetaldehyde dehydrogenase (acetylating)

Probab=98.33  E-value=5.8e-07  Score=92.96  Aligned_cols=94  Identities=10%  Similarity=-0.003  Sum_probs=70.5

Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhcc----CCcccee
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANN----SDYGLAA  419 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~----~~yGl~~  419 (442)
                      +||++.-..++.+.+.++.+...+.-+-.+-. .+....+.+ .++.+|+|   +..++.+||++.+|+    ++||+++
T Consensus       294 ~gp~i~~~~~~~i~~~i~~av~~gakll~gg~-~~v~~~~~~-~~E~fgPVl~v~~~~~~dEAI~~an~~i~~~~~Glta  371 (488)
T TIGR02518       294 MNPQIVGKSPQVIANLAGLTVPEDAKVLIGEQ-NGVGNKNPY-SREKLTTILAFYTEENWHEACELSIELLQNEGAGHTL  371 (488)
T ss_pred             cCcccccchHHHHHHHhccccCCCCEEEEeCC-CCCCCCCcc-ccCccCceEEEEEeCCHHHHHHHHHHhhhcCCCCCeE
Confidence            57777777777777777776554433221111 123334445 56778865   778999999999887    7999999


Q ss_pred             EEeccChhHHHHHHccccccccC
Q psy5844         420 AVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       420 ~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|||+|..++.+|++++++|.||
T Consensus       372 ~I~T~d~~~a~~f~~~i~ag~V~  394 (488)
T TIGR02518       372 IIHSENKDIVREFALKKPVSRML  394 (488)
T ss_pred             EEEeCCHHHHHHHHHhCCeeEEE
Confidence            99999999999999999999985

>TIGR01092 P5CS delta l-pyrroline-5-carboxylate synthetase

Probab=98.29  E-value=1.2e-06  Score=94.52  Aligned_cols=58  Identities=9%  Similarity=0.127  Sum_probs=54.3

Q ss_pred             hhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         385 TNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       385 ~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       584 ~~~i~~eE~FGPvl~v~~~~~~deAi~~~N~~~~gLa~~ift~d~~~a~~~~~~i~sG~V~  644 (715)
T TIGR01092       584 ETKSFRTEYSSLACTVEIVDDVYDAIDHIHKHGSAHTDCIVTEDENVAEFFLQHVDSAAVF  644 (715)
T ss_pred             CchhhhccccCceEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEE
Confidence            5688999999975   678999999999999999999999999999999999999999986

This protein contains a glutamate 5-kinase (ProB, EC 2.7.2.11) region followed by a gamma-glutamyl phosphate reductase (ProA, EC 1.2.1.41) region.

>cd07078 ALDH NAD(P)+ dependent aldehyde dehydrogenase family

Probab=98.25  E-value=1.2e-06  Score=89.67  Aligned_cols=119  Identities=32%  Similarity=0.512  Sum_probs=86.2

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCCCceEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAAA  376 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~  376 (442)
                      ...+|+..+++.+...+....++           .+||++....++..++.++.+..               .+..+.++
T Consensus       243 ~~i~v~~~~~~~~~~~L~~~l~~~~~g~p~~~~~~~~~~~~~~~~~~~~~~i~~~~~~g~~~~~gg~~~~~~~g~~~~Pt  322 (432)
T cd07078         243 SRLLVHESIYDEFVERLVERVKALKVGNPLDPDTDMGPLISAAQLDRVLAYIEDAKAEGAKLLCGGKRLEGGKGYFVPPT  322 (432)
T ss_pred             ceEEEcHHHHHHHHHHHHHHHHccCcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCcEEccE
Confidence            44566666666555544333222           24667776666777666665421               12344567


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |+. +.+..+.+++++.+|+|   +.+++.+|+++.+|+++|||++|+||+|...+.++++++++|.|+
T Consensus       323 v~~-~~~~~~~~~~~E~fgPvl~v~~~~~~~eai~~~n~~~~~l~~~i~t~d~~~~~~~~~~~~~g~v~  390 (432)
T cd07078         323 VLT-DVDPDMPIAQEEIFGPVLPVIPFKDEEEAIELANDTEYGLAAGVFTRDLERALRVAERLEAGTVW  390 (432)
T ss_pred             EEe-cCCCCChhhhCCCcCceEEEEEeCCHHHHHHHHhCCCcCceEEEECCCHHHHHHHHHhcCcceEE
Confidence            776 44455678888899965   678899999999999999999999999999999999999999874

The aldehyde dehydrogenase family (ALDH) of NAD(P)+ dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or as osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydride transfer

>cd07127 ALDH_PAD-PaaZ Phenylacetic acid degradation proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida)-like

Probab=98.10  E-value=2.6e-06  Score=89.02  Aligned_cols=121  Identities=18%  Similarity=0.214  Sum_probs=86.8

Q ss_pred             CCcccCCCCcccccc---------eeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHh---c-----
Q psy5844         316 GGGRAGDKGFYVQPT---------VFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERAN---N-----  368 (442)
Q Consensus       316 gg~~~~~~g~~v~pt---------i~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an---~-----  368 (442)
                      |..|......||+..         ++++|...+....+.          .+||++.-..++.++++++...   .     
T Consensus       336 GQ~C~a~~ri~V~~s~i~~~~g~~i~d~f~~~L~~~~~~l~Gdp~~~~~~~Gpli~~~~~~ri~~a~~~g~vl~gg~~~~  415 (549)
T cd07127         336 GQMCTTPQNIYVPRDGIQTDDGRKSFDEVAADLAAAIDGLLADPARAAALLGAIQSPDTLARIAEARQLGEVLLASEAVA  415 (549)
T ss_pred             CCCCCCCCEEEEECCccccccchhHHHHHHHHHHHHHHHhcCCccccccccCCcCCHHHHHHHHHHHhCCCEEEcCCcCC
Confidence            333433445677776         666666555433322          3688888888888888876431   0     


Q ss_pred             ----CCC-CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCC--c-cceeEEeccChhHHHHHHcccc
Q psy5844         369 ----SDY-GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSD--Y-GLAAAVFTKDLDKTNYVTQGLR  437 (442)
Q Consensus       369 ----~~~-gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~--y-Gl~~~vft~d~~~~~~~~~~l~  437 (442)
                          .++ .+.++|+. +....+.+++++.||+|   +.+++.+|+++.+|++.  | ||++||||+|...+.++.+.++
T Consensus       416 ~~~~~g~~~~~Ptvl~-~~~~d~~i~~eE~FGPVl~V~~~~d~~eai~~an~~~~~~ggLt~sVfs~D~~~~~~~~~~~~  494 (549)
T cd07127         416 HPEFPDARVRTPLLLK-LDASDEAAYAEERFGPIAFVVATDSTDHSIELARESVREHGAMTVGVYSTDPEVVERVQEAAL  494 (549)
T ss_pred             CcCCCCceEEeCEEEE-eCCCCCHHHcCCCcCceEEEEEeCCHHHHHHHHHhcccCCCCceEEEEcCCHHHHHHHHHHHH
Confidence                122 23788886 34456789999999975   77899999999999984  4 6999999999999999999844

Phenylacetic acid degradation (PAD) proteins PaaZ (Escherichia coli) and PaaN (Pseudomonas putida) are putative aromatic ring cleavage enzymes of the aerobic PA catabolic pathway. PaaZ mutants were defective for growth with PA as a sole carbon source due to interruption of the putative ring opening system. This CD is limited to bacterial monofunctional enzymes.

>KOG2456|consensus

Probab=98.02  E-value=4.7e-06  Score=80.64  Aligned_cols=125  Identities=18%  Similarity=0.254  Sum_probs=92.0

Q ss_pred             EEeCCcccCCCCcccccceeccCcchhHHHHHhhcCC----------cccccccCCHHHHHHHHhc------------CC
Q psy5844         313 LVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP----------VQQLIRFSSIEEVIERANN------------SD  370 (442)
Q Consensus       313 ~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgP----------vl~v~~~~~~~eai~~an~------------~~  370 (442)
                      .++|..+...+=..+++++...+...+....+|.||+          |+....|+++   ..+++.            ..
T Consensus       238 ~N~GQtCvapDYiL~~k~~~~kli~alk~~l~eFYG~n~~eS~d~sRiIn~~hf~Rl---~~ll~~~~kv~~Gg~~d~~d  314 (477)
T KOG2456|consen  238 MNSGQTCVAPDYILCSKSIQPKLIDALKSTLKEFYGENPKESKDLSRIINQRHFQRL---SALLDETGKVAIGGESDESD  314 (477)
T ss_pred             ccCCCeeccCCeEEecHhhhHHHHHHHHHHHHHHhCCCccccccHHHHhhHHHHHHH---HHHhcCCCceecCCccchhh
Confidence            4444444333333455666666666666667788876          3333333333   333433            23


Q ss_pred             CCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHcccccccc
Q psy5844         371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTV  441 (442)
Q Consensus       371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v  441 (442)
                      ...+++|.. |.+....+++++.||+|   ....+.+|++..+|..+.+|+.|+||+|.....|+..+.++|.|
T Consensus       315 ~~I~PTIL~-DV~~~~p~M~eEIFGPiLPIi~v~~l~Eai~~In~~eKPLa~Y~Fs~n~~~vkr~l~~tsSGgv  387 (477)
T KOG2456|consen  315 RYIAPTILL-DVPEDSPVMQEEIFGPILPIITVQSLDEAINFINEREKPLALYIFSNNEKLVKRFLTETSSGGV  387 (477)
T ss_pred             cccCCeEEe-cCCCCChhhhhhhccCccceeEhhhHHHHHHHHhcCCCceEEEEecCCHHHHHHHHHhccCCCe
Confidence            456889988 88999999999999975   55678999999999999999999999999999999999999986

>PRK13805 bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Provisional

Probab=98.00  E-value=5.2e-06  Score=91.99  Aligned_cols=122  Identities=12%  Similarity=0.236  Sum_probs=87.0

Q ss_pred             eCCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcC------------------CCCceEE
Q psy5844         315 AGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNS------------------DYGLAAA  376 (442)
Q Consensus       315 ~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~------------------~~gl~~~  376 (442)
                      .|..|......+|+..|+++|...+.    +..+|++.-..++.+.+.++.+.+.                  ++.+.++
T Consensus       247 ~GQ~C~a~~~v~V~~~i~d~f~~~l~----~~g~~l~~~~~~~~v~~~i~~a~~~~~~~~~~g~~~~~~~~~~G~~~~p~  322 (862)
T PRK13805        247 NGMICASEQAVIVDDEIYDEVKEEFA----SHGAYFLNKKELKKLEKFIFGKENGALNADIVGQSAYKIAEMAGFKVPED  322 (862)
T ss_pred             CCCccCCCceEEEehhhHHHHHHHHH----HhCCeeCCHHHHHHHHHHHhhccCCCcCccccCCCHHHHHHHcCCCCCCC
Confidence            34444444567888888887765543    2257888877777777777642111                  2222333


Q ss_pred             E------ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhcc----CCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 V------FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANN----SDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v------~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~----~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +      ++ +....+.+.+ +.+|+|   +..++.+||++.+|+    ++||+++++||+|..++.++++++++|+|+
T Consensus       323 ~~~~i~~l~-~v~~~~~~~~-E~fgPVl~v~~~~~~deAi~~~n~~~~~~~~gl~~~i~t~d~~~~~~~~~~l~~g~v~  399 (862)
T PRK13805        323 TKILIAEVK-GVGESEPLSH-EKLSPVLAMYKAKDFEDAVEKAEKLVEFGGLGHTAVIYTNDDELIKEFGLRMKACRIL  399 (862)
T ss_pred             CeEEEEecC-CCCCCCcchh-cccCcEEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHhhCCccEEE
Confidence            2      22 4455566776 578865   678999999999988    589999999999999999999999999985

>cd07077 ALDH-like NAD(P)+-dependent aldehyde dehydrogenase-like (ALDH-like) family

Probab=97.93  E-value=9.6e-06  Score=82.09  Aligned_cols=106  Identities=11%  Similarity=0.122  Sum_probs=71.7

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEee
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG  395 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G  395 (442)
                      |..+......||+..+++++...+....++ .|              .++.. .+.+    .|. .+...+.+.+++.||
T Consensus       239 GQ~C~a~~~v~V~~~i~d~~~~~l~~~~~~-~G--------------~~~~~-g~~~----~~~-~pt~~~~~~~~E~Fg  297 (397)
T cd07077         239 QNACASEQNLYVVDDVLDPLYEEFKLKLVV-EG--------------LKVPQ-ETKP----LSK-ETTPSFDDEALESMT  297 (397)
T ss_pred             CccCCCCeEEEEehhhhHHHHHHHHHHHHh-cC--------------cCcCC-Ccee----eEE-eccCCCChhhhhhhC
Confidence            444544556799999998777665543333 01              00000 0011    121 112456677789999


Q ss_pred             eE---EeeCCHH----HHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         396 TL---IRFSSIE----EVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       396 ~V---~vN~~~~----~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|   +..++.+    ++++.+|+++|||+++|||+|.+++.++++++++|+||
T Consensus       298 Pvl~v~~~~~~~eai~~ai~~~n~~~~gl~~~Ift~d~~~~~~~~~~l~~G~v~  351 (397)
T cd07077         298 PLECQFRVLDVISAVENAWMIIESGGGPHTRCVYTHKINKVDDFVQYIDTASFY  351 (397)
T ss_pred             ceeEEEEEcchHHHHHHHHHHHHhcCCCCceEEEeCCHHHHHHHHHhCCEEEEE
Confidence            76   5567775    56667899999999999999999999999999999985

The aldehyde dehydrogenase-like (ALDH-like) group of the ALDH superfamily of NAD(P)+-dependent enzymes which, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. This group includes families ALDH18, ALDH19, and ALDH20 and represents such proteins as gamma-glutamyl phosphate reductase, LuxC-like acyl-CoA reductase, and coenzyme A acylating aldehyde dehydrogenase. All of these proteins have a conserved cysteine that aligns with the catalytic cysteine of the ALDH group.

>cd06534 ALDH-SF NAD(P)+-dependent aldehyde dehydrogenase superfamily

Probab=97.75  E-value=2.2e-05  Score=78.58  Aligned_cols=66  Identities=44%  Similarity=0.669  Sum_probs=56.3

Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +++. +.+....+++++.+|+|   ..+++.+++++.+|+++|||++|+||+|...+.++++++++|.|+
T Consensus       257 tl~~-~~~~~~~~~~~E~fgPv~~v~~~~~~~eai~~~n~~~~gl~~~i~t~d~~~~~~~~~~~~~g~v~  325 (367)
T cd06534         257 TVLV-DVDPDMPIAQEEIFGPVLPVIRFKDEEEAIALANDTEYGLTAGVFTRDLNRALRVAERLRAGTVY  325 (367)
T ss_pred             eeee-CCCCCCccccCCccCceEEEEecCCHHHHHHHHhCCCCCCeEEEECCCHHHHHHHHHhCCcceEE
Confidence            5555 33344677888888964   667889999999999999999999999999999999999999875

The aldehyde dehydrogenase superfamily (ALDH-SF) of NAD(P)+-dependent enzymes, in general, oxidize a wide range of endogenous and exogenous aliphatic and aromatic aldehydes to their corresponding carboxylic acids and play an important role in detoxification. Besides aldehyde detoxification, many ALDH isozymes possess multiple additional catalytic and non-catalytic functions such as participating in metabolic pathways, or as binding proteins, or osmoregulants, to mention a few. The enzyme has three domains, a NAD(P)+ cofactor-binding domain, a catalytic domain, and a bridging domain; and the active enzyme is generally either homodimeric or homotetrameric. The catalytic mechanism is proposed to involve cofactor binding, resulting in a conformational change and activation of an invariant catalytic cysteine nucleophile. The cysteine and aldehyde substrate form an oxyanion thiohemiacetal intermediate resulting in hydri

>COG4230 Delta 1-pyrroline-5-carboxylate dehydrogenase [Energy production and conversion]

Probab=97.37  E-value=0.00013  Score=73.47  Aligned_cols=93  Identities=24%  Similarity=0.299  Sum_probs=71.2

Q ss_pred             cCCcccccccCCHHHHHHHHhc---------------CCCCceEEEecCCCChhhhhccccEeeeE-----EeeCCHHHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANN---------------SDYGLAAAVFTKDLDKTNYVTQGLRAGTL-----IRFSSIEEV  406 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~v~s~d~~~~~~~~~~~~~G~V-----~vN~~~~~a  406 (442)
                      .|||+.-..-++++..|+.+..               .+....+++|--   .....++++.||+|     |.-+..++.
T Consensus       421 VGPVIdaEAk~~i~~Hi~~mr~~gr~v~q~~~~~~~q~GtFv~Ptl~El---~~~~eL~rEVFGPVLHVvRy~~~~l~~v  497 (769)
T COG4230         421 VGPVIDAEAKANIEKHIQTMRSKGRLVHQAAAPNSLQKGTFVAPTLIEL---ENLDELQREVFGPVLHVVRYKRDELDEV  497 (769)
T ss_pred             ccccccHHHHHHHHHHHHHHHhcccchhhccCCCccCCceeeCceeEEc---CCHHHHHHHhccceeEEEEecHHHHHHH
Confidence            5888888888888888887632               233345555531   12445677889987     223457889


Q ss_pred             HHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         407 IERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       407 v~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++.+|.++|||+.+++|+....+.++.+++++|..|
T Consensus       498 i~~INatGyGLT~GvHtRideti~~v~~~~~aGNlY  533 (769)
T COG4230         498 IDQINATGYGLTLGVHTRIDETIAHVTERAHAGNLY  533 (769)
T ss_pred             HHHHhccCcceeeeeecchHHHHHHHHhhccccceE
Confidence            999999999999999999999999999999999864

>KOG2455|consensus

Probab=96.86  E-value=0.00076  Score=66.16  Aligned_cols=91  Identities=21%  Similarity=0.353  Sum_probs=69.5

Q ss_pred             cCCcccccccCCHHHHHHHHhc---------------CCCCceEEEecCCCChhhhhccccEeeeE---Eee--CCHHHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANN---------------SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRF--SSIEEV  406 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN--~~~~~a  406 (442)
                      +||++....|+++...++.+..               .++...++|.. ..+....++.++.||+|   +++  +...|+
T Consensus       385 ~gavIh~~sF~rl~k~le~ak~~~~leiL~GGk~DdS~G~FV~PTiv~-~kdP~~pim~ee~fGPvLsVyvY~Dd~~~E~  463 (561)
T KOG2455|consen  385 IGAVIHDKSFARLKKVLEHAKKDPELEILAGGKCDDSTGYFVEPTIVL-SKDPKDPIMTEEIFGPVLSVYVYEDDKFDEV  463 (561)
T ss_pred             hhhhccHHHHHHHHHHHHhhccCccceeeecCcccCCCCeeecceEEE-ccCCCcchhhhhccCceeEEEEeccccHHHH
Confidence            6899999999999888888743               34455666653 33345678888889964   554  456788


Q ss_pred             HHh-hccCCccceeEEeccChhHHHHHHccccc
Q psy5844         407 IER-ANNSDYGLAAAVFTKDLDKTNYVTQGLRA  438 (442)
Q Consensus       407 v~~-an~~~yGl~~~vft~d~~~~~~~~~~l~~  438 (442)
                      .+. .|.+.|||+++||.+|..-..+..+.+|-
T Consensus       464 l~lv~~tt~YaLTGaiFaqd~~vv~~a~~~Lr~  496 (561)
T KOG2455|consen  464 LKLVDNTTPYALTGAIFAQDREVVLHALDVLRM  496 (561)
T ss_pred             HHHHhcCCcceeccccccccHHHHHHHHHHHHh
Confidence            886 57889999999999999999998887763

>KOG2453|consensus

Probab=96.20  E-value=0.0024  Score=60.56  Aligned_cols=112  Identities=21%  Similarity=0.340  Sum_probs=80.5

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhcC--------------CCCceEEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANNS--------------DYGLAAAV  377 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~~--------------~~gl~~~v  377 (442)
                      ...++|..|++.+.+.++.....           ++||+-+-..+..++..++.+...              +....++|
T Consensus       303 rrl~~hesvyd~vlerlkkayaq~~ignpld~ntl~gplht~qav~~f~~~veeak~~ggki~yggkv~er~gnfvepti  382 (507)
T KOG2453|consen  303 RRLIVHESVYDQVLERLKKAYAQFEIGNPLDSNTLIGPLHTQQAVGKFKASVEEAKASGGKIEYGGKVLERDGNFVEPTI  382 (507)
T ss_pred             hHHHhhHHHHHHHHHHHHHHHHheecCCcCCCCceeccccCHHHHHHHHHHHHHHHhcCCeEEECCEeeccCCCcccceE
Confidence            45688888888777665443322           378888888888888888877432              33445666


Q ss_pred             ecCCCChhhhhccccEeee---EEeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccc
Q psy5844         378 FTKDLDKTNYVTQGLRAGT---LIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL  436 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~---V~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l  436 (442)
                      .+  ......+..++.|.+   |..+.+.+|+++.-|..+-||++++||+|..++.|-....
T Consensus       383 vt--l~hda~vv~~etfapilyvlkf~~~eea~ainnev~qglsssift~n~~nifrw~gpk  442 (507)
T KOG2453|consen  383 VT--LKHDAPVVLRETFAPILYVLKFSTLEEAIAINNEVDQGLSSSIFTTNIQNIFRWMGPK  442 (507)
T ss_pred             EE--ecCCcchhhhhhccceeeEEeccchhhhheeccccccccchhhhhcCHHHHHhhhCCC
Confidence            65  233334444555554   3567899999999999999999999999999999877644

>PF00815 Histidinol_dh: Histidinol dehydrogenase; InterPro: IPR012131 Histidinol dehydrogenase (HDH) catalyzes the terminal step in the biosynthesis of histidine in bacteria, fungi, and plants, the four-electron oxidation of L-histidinol to histidine

Probab=95.34  E-value=3.6  Score=41.44  Aligned_cols=236  Identities=20%  Similarity=0.166  Sum_probs=109.3

Q ss_pred             CCcceEEEeeccceEEEecccc-cch-HHHHhhhhhhhccCCeEEecCCC--CChHHHHHHHHHHHHhCCCCCcEEeecC
Q psy5844          95 GDFFAYTRHEPVGVCGQIIPWN-FPL-LMLAWKIAPALATGNTIVLKPAE--QTPLTALAVGALIAEAGIPEGVVNIVPG  170 (442)
Q Consensus        95 ~~~~~~~~~~P~Gvv~~i~p~n-~P~-~~~~~~~~~aL~~Gn~vv~kps~--~~~~~~~~l~~~l~~aglp~~~~~~v~~  170 (442)
                      .|.....++.|+--|++..|.- +|+ ++++..++||-.+|..=|+-.+|  ..-.....+.-..+.+|+.+    +..-
T Consensus        96 ~G~~~g~~~~Pi~rvG~YVPGG~a~~pStvlM~aiPA~vAGV~~Iv~~TPp~~~G~i~p~vL~Aa~~~Gv~e----vy~v  171 (412)
T PF00815_consen   96 PGVILGQRYRPIERVGLYVPGGRAPYPSTVLMTAIPAKVAGVKEIVVCTPPPKDGKINPAVLAAAHLAGVDE----VYKV  171 (412)
T ss_dssp             TTEEEEEEEEE-SEEEEE---SSS--THHHHHHHHHHHHHT-SEEEEEE-SS------HHHHHHHHHTT-SE----EEE-
T ss_pred             CCcEEEEEEEEhhheEEEccCCCCCccHHHHHcccchhhcCCCeEEEEcCCCccCCCCHHHHHHHHHcCCCE----EEec
Confidence            5677788999999999999954 444 45667788999999876654333  32223334445556677753    2222


Q ss_pred             Cc-cchhhhh----cCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCce--EEeCCCCHHHHHHHHHHHhhcc
Q psy5844         171 YG-DAGAALV----QHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPN--IIFADADLDAAVEGAHFGLFFN  243 (442)
Q Consensus       171 ~~-~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~--iV~~dad~~~a~~~i~~~~~~~  243 (442)
                      .+ +...+|.    .-|.||.|+=.|..-+..+=+...+ .  .-+=+ .-|.+=+  |-+++||.+.++..++.-+=+.
T Consensus       172 GGaqAIAAlAyGTeti~~VDkIvGPGN~yV~~AK~~v~g-~--V~ID~-~AGPSEv~ViAD~~A~p~~vAaDLLaQAEHd  247 (412)
T PF00815_consen  172 GGAQAIAALAYGTETIPKVDKIVGPGNAYVTAAKRLVFG-D--VGIDM-IAGPSEVLVIADETANPEFVAADLLAQAEHD  247 (412)
T ss_dssp             -HHHHHHHHHH--SSS---SEEE---SHHHHHHHHHHHH-S---EES-------EEEEEE-TTS-HHHHHHHHHHHHTT-
T ss_pred             ccHHHHHHHHcCCCCCCceeEEECCCcHHHHHHHHHhcC-C--cccCC-CCCCCceEEEECCCCCHHHHHHHHHHHhccC
Confidence            23 3333433    3478999999888765443222111 0  11111 1233333  3456789988888877665443


Q ss_pred             CCCcccCCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCC
Q psy5844         244 MGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDK  323 (442)
Q Consensus       244 ~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~  323 (442)
                      ..     .+-++|..+  +++.+++.+.+.+.--.           +.   ..    +.++.+..               
T Consensus       248 ~~-----a~~vLvt~s--~~la~~V~~~v~~~l~~-----------l~---r~----~i~~~sl~---------------  287 (412)
T PF00815_consen  248 PD-----AQAVLVTTS--EELAEAVEAEVERQLEE-----------LP---RR----EIAEKSLE---------------  287 (412)
T ss_dssp             TT------EEEEEES---HHHHHHHHHHHHHHHTT------------T---TH----HHHHHHHT---------------
T ss_pred             CC-----CceEEEECC--HHHHHHHHHHHHHHHHh-----------CC---ch----HHHHHHHH---------------
Confidence            32     234666655  45555555444321000           00   00    11111111               


Q ss_pred             CcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccE-eeeEEeeCC
Q psy5844         324 GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR-AGTLIRFSS  402 (442)
Q Consensus       324 g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~-~G~V~vN~~  402 (442)
                                                --.+..+++++|+++++|..-.-+ ..+.++|+   +.++.+++ +|.|++...
T Consensus       288 --------------------------~g~ii~~~~l~ea~~~~N~~APEH-Lel~~~~~---~~~~~~i~~AGaiFlG~~  337 (412)
T PF00815_consen  288 --------------------------NGAIIVVDSLEEAIELANEYAPEH-LELQVEDP---EELLEKIRNAGAIFLGEY  337 (412)
T ss_dssp             --------------------------T-EEEE-SSHHHHHHHHHHH--SE-EEEESTTH---HHHGGG--S-SEEEESTT
T ss_pred             --------------------------CCeEEEECCHHHHHHHHHHhhHHH-HHHHHcCH---HHHHHHhhccChhhcCCC
Confidence                                      122335688899999999743322 25666554   56666665 889999887


Q ss_pred             HHHHHH
Q psy5844         403 IEEVIE  408 (442)
Q Consensus       403 ~~~av~  408 (442)
                      ..+++.
T Consensus       338 tp~a~G  343 (412)
T PF00815_consen  338 TPEALG  343 (412)
T ss_dssp             --HHHH
T ss_pred             CCHHHh
Confidence            777655

In 4-electron dehydrogenases, a single active site catalyses 2 separate oxidation steps: oxidation of the substrate alcohol to an intermediate aldehyde; and oxidation of the aldehyde to the product acid, in this case His []. The reaction proceeds via a tightly- or covalently-bound inter-mediate, and requires the presence of 2 NAD molecules []. By contrast with most dehydrogenases, the substrate is bound before the NAD coenzyme []. A Cys residue has been implicated in the catalytic mechanism of the second oxidative step []. In bacteria HDH is a single chain polypeptide; in fungi it is the C-terminal domain of a multifunctional enzyme which catalyzes three different steps of histidine biosynthesis; and in plants it is expressed as nuclear encoded protein precursor which is exported to the chloroplast [].; GO: 0004399 histidinol dehydrogenase activity, 0008270 zinc ion binding, 0051287 NAD binding, 0000105 histidine biosynthetic process, 0055114 oxidation-reduction process; PDB: 1KAE_B 1K75_A 1KAH_A 1KAR_B.

>KOG2449|consensus

Probab=93.54  E-value=0.047  Score=45.48  Aligned_cols=68  Identities=16%  Similarity=0.241  Sum_probs=56.7

Q ss_pred             CceEEEecCCCChhhhhccccEeeeEEe---eCCHHHHHHhhccCCccceeEEeccChhHHHHHHcccccccc
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTLIR---FSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTV  441 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V~v---N~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v  441 (442)
                      ...+++.+  ....+....+..+|+|.+   -.+++++|...|+.+||-+..+||.+...++++.+.+.+|-+
T Consensus        66 f~~~tiLs--vtP~ms~ykeeI~gpVlv~l~~~tldd~I~Iin~nPygn~t~i~Tsn~atark~~~e~~a~qi  136 (157)
T KOG2449|consen   66 FVGPTILS--VTPNMSCYKEEIFGPVLVRLETETLDDAIFIINNNPYGNGTAIFTSNGATARKFCHEPDAGQI  136 (157)
T ss_pred             cccceEEE--ecCCcceeHhhhhcceEEEEeecCCCceeEEEecCCCCceeEEEecCcHHhhhhhcCCCccce
Confidence            34556666  455678888888998855   356789999999999999999999999999999999998864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	442
2onn_A	500	Arg475gln Mutant Of Human Mitochondrial Aldehyde De		1e-149
1o05_A	500	Apo Form Of Human Mitochondrial Aldehyde Dehydrogen		1e-149
1cw3_A	494	Human Mitochondrial Aldehyde Dehydrogenase Complexe		1e-149
1zum_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		1e-149
3n81_A	500	T244a Mutant Of Human Mitochondrial Aldehyde Dehydr		1e-148
1nzw_A	500	Cys302ser Mutant Of Human Mitochondrial Aldehyde De		1e-148
3n80_A	500	Human Mitochondrial Aldehyde Dehydrogenase, Apo For		1e-148
3inl_A	500	Human Mitochondrial Aldehyde Dehydrogenase Asian Va		1e-147
1ag8_A	499	Aldehyde Dehydrogenase From Bovine Mitochondria Len		1e-147
4fr8_A	500	Crystal Structure Of Human Aldehyde Dehydrogenase-2		1e-146
1bi9_A	499	Retinal Dehydrogenase Type Two With Nad Bound Lengt		1e-145
1bxs_A	501	Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad		1e-134
1o9j_A	501	The X-Ray Crystal Structure Of Eta-Crystallin Lengt		1e-131
2o2p_A	517	Crystal Structure Of The C-Terminal Domain Of Rat 1		8e-96
3rhm_A	517	Crystal Structure Of The E673q Mutant Of C-Terminal		2e-95
3rhj_A	517	Crystal Structure Of The E673a Mutant Of The C-Term		4e-95
3rhr_A	517	Crystal Structure Of The C707a Mutant Of The C-Term		1e-94
4gnz_A	517	Crystal Structure Of The C707s Mutant Of C-terminal		2e-94
3rhl_A	517	Crystal Structure Of The E673aC707A DOUBLE MUTANT O		9e-94
2wox_A	489	Betaine Aldehyde Dehydrogenase From Pseudomonas Aer		1e-88
2wme_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		2e-88
2xdr_A	489	Crystallographic Structure Of Betaine Aldehyde Dehy		8e-88
3r31_A	517	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-87
3zqa_A	490	Crystallographic Structure Of Betaine Aldehyde Dehy		3e-87
2wme_C	490	Crystallographic Structure Of Betaine Aldehyde Dehy		4e-87
1a4s_A	503	Betaine Aldehyde Dehydrogenase From Cod Liver Lengt		4e-83
4a0m_A	496	Crystal Structure Of Betaine Aldehyde Dehydrogenase		2e-82
2d4e_A	515	Crystal Structure Of The Hpcc From Thermus Thermoph		1e-77
4i8p_A	520	Crystal Structure Of Aminoaldehyde Dehydrogenase 1a		8e-77
3ed6_A	520	1.7 Angstrom Resolution Crystal Structure Of Betain		4e-76
3iwj_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 2		9e-74
3iwk_A	503	Crystal Structure Of Aminoaldehyde Dehydrogenase 1		3e-72
4dal_A	498	Crystal Structure Of Putative Aldehyde Dehydrogenas		1e-69
4i9b_A	517	Structure Of Aminoaldehyde Dehydrogenase 1 From Sol		4e-69
4i8q_A	514	Structure Of The Aminoaldehyde Dehydrogenase 1 E260		2e-68
3b4w_A	495	Crystal Structure Of Mycobacterium Tuberculosis Ald		3e-68
3jz4_A	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		8e-68
3jz4_C	481	Crystal Structure Of E. Coli Nadp Dependent Enzyme		9e-68
3ifg_A	484	Crystal Structure Of Succinate-Semialdehyde Dehydro		4e-65
1wnb_A	495	Escherichia Coli Ydcw Gene Product Is A Medium-Chai		4e-64
3u4j_A	528	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		4e-64
3i44_A	497	Crystal Structure Of Aldehyde Dehydrogenase From Ba		8e-64
3ek1_A	504	Crystal Structure Of Aldehyde Dehydrogenase From Br		1e-61
2opx_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		1e-60
3rjl_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		3e-60
2imp_A	479	Crystal Structure Of Lactaldehyde Dehydrogenase Fro		6e-60
2hg2_A	479	Structure Of Lactaldehyde Dehydrogenase Length = 47		7e-60
3k2w_A	497	Crystal Structure Of Betaine-Aldehyde Dehydrogenase		1e-59
3ty7_A	478	Crystal Structure Of Aldehyde Dehydrogenase Family		4e-57
3qan_A	538	Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehy		6e-57
3pqa_A	486	Crystal Structure Of Glyceraldehyde-3-Phosphate Deh		1e-56
2w8n_A	487	The Crytal Structure Of The Oxidized Form Of Human		1e-55
2w8p_A	487	The Crystal Structure Of Human C340a Ssadh Length =		2e-54
1t90_A	486	Crystal Structure Of Methylmalonate Semialdehyde De		1e-53
1uzb_A	516	1-pyrroline-5-carboxylate Dehydrogenase Length = 51		2e-52
3prl_A	505	Crystal Structure Of Nadp-Dependent Glyceraldehyde-		2e-52
2bhp_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		2e-52
4dng_A	485	Crystal Structure Of Putative Aldehyde Dehydrogenas		2e-51
2bja_A	516	Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehyd		6e-51
1euh_A	475	Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase		8e-49
2id2_A	475	Gapn T244s Mutant X-Ray Structure At 2.5 A Length =		2e-48
2esd_A	475	Crystal Structure Of Thioacylenzyme Intermediate Of		5e-48
3rh9_A	506	The Crystal Structure Of Oxidoreductase From Marino		1e-47
1qi1_A	475	Ternary Complex Of An Nadp Dependent Aldehyde Dehyd		1e-47
3r64_A	508	Crystal Structure Of A Nad-Dependent Benzaldehyde D		1e-46
2jg7_A	510	Crystal Structure Of Seabream Antiquitin And Elucid		2e-46
4f9i_A	1026	Crystal Structure Of Proline Utilization A (Puta) F		2e-45
1ky8_A	501	Crystal Structure Of The Non-Phosphorylating Glycer		5e-43
1uxv_A	501	Structural Basis For Allosteric Regulation And Subs		8e-43
2j6l_A	500	Structure Of Aminoadipate-Semialdehyde Dehydrogenas		1e-42
1uxn_A	501	Structural Basis For Allosteric Regulation And Subs		1e-42
4e4g_A	521	Crystal Structure Of Putative Methylmalonate-Semial		4e-38
3ros_A	484	Crystal Structure Of Nad-Dependent Aldehyde Dehydro		7e-38
3efv_A	462	Crystal Structure Of A Putative Succinate-Semialdeh		7e-37
4h7n_A	474	The Structure Of Putative Aldehyde Dehydrogenase Pu		1e-36
3lv1_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		7e-35
3haz_A	1001	Crystal Structure Of Bifunctional Proline Utilizati		7e-35
3lns_A	457	Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehy		2e-33
3ju8_A	490	Crystal Structure Of Succinylglutamic Semialdehyde		1e-32
1ad3_A	452	Class 3 Aldehyde Dehydrogenase Complex With Nicotin		1e-30
3sza_A	469	Crystal Structure Of Human Aldh3a1 - Apo Form Lengt		3e-29
3v9g_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		2e-26
3v9j_A	563	Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylat		3e-26
3v9h_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		5e-26
3v9i_A	566	Crystal Structure Of Human 1-Pyrroline-5-Carboxylat		1e-25
2y51_A	534	Crystal Structure Of E167a Mutant Of The Box Pathwa		1e-12
2y52_A	534	Crystal Structure Of E496a Mutant Of The Box Pathwa		2e-12
2vro_A	532	Crystal Structure Of Aldehyde Dehydrogenase From Bu		2e-12
2y53_A	534	Crystal Structure Of E257q Mutant Of The Box Pathwa		4e-12
2y5d_A	534	Crystal Structure Of C296a Mutant Of The Box Pathwa		3e-11
3v4c_A	528	Crystal Structure Of A Semialdehyde Dehydrogenase F		1e-05
3my7_A	452	The Crystal Structure Of The Acdh Domain Of An Alco		3e-04

>pdb|2ONN|A Chain A, Arg475gln Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  525 bits (1352), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 245/349 (70%), Positives = 292/349 (83%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 103 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 162
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 222
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 223 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 282
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 283 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 342
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 343 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 402
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 403 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 451

>pdb|1O05|A Chain A, Apo Form Of Human Mitochondrial Aldehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  525 bits (1352), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 245/349 (70%), Positives = 292/349 (83%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 103 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 162
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 222
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 223 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 282
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 283 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 342
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 343 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 402
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 403 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 451

>pdb|1CW3|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nad+ And Mn2+ Length = 494

Iteration: 1
 Score =  524 bits (1349), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 245/349 (70%), Positives = 292/349 (83%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 97  AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 156
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 157 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 216
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 217 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 276
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 277 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 336
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 337 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 396
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 397 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 445

>pdb|1ZUM|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Apo Form Length = 500

Iteration: 1
 Score =  523 bits (1348), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 245/349 (70%), Positives = 292/349 (83%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 103 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 162
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 222
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 223 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 282
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 283 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 342
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 343 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 402
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 403 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 451

>pdb|3N81|A Chain A, T244a Mutant Of Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  523 bits (1346), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 244/349 (69%), Positives = 291/349 (83%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 103 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 162
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 222
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAF GSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 223 GFGPTAGAAIASHEDVDKVAFAGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 282
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 283 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 342
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 343 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 402
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 403 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 451

>pdb|1NZW|A Chain A, Cys302ser Mutant Of Human Mitochondrial Aldehyde Dehydrogenase Complexed With Nadh And Mg2+ Length = 500

Iteration: 1
 Score =  521 bits (1341), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 244/349 (69%), Positives = 291/349 (83%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 103 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 162
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 222
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 223 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 282
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQC CAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 283 MDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 342
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 343 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 402
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 403 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 451

>pdb|3N80|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase, Apo Form Length = 500

Iteration: 1
 Score =  520 bits (1340), Expect = e-148,   Method: Compositional matrix adjust.
 Identities = 244/349 (69%), Positives = 291/349 (83%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 103 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 162
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 222
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 223 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 282
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQC CAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 283 MDWAVEQAHFALFFNQGQCXCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 342
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 343 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 402
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 403 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 451

>pdb|3INL|A Chain A, Human Mitochondrial Aldehyde Dehydrogenase Asian Variant, Aldh22, Complexed With Agonist Alda-1 Length = 500

Iteration: 1
 Score =  519 bits (1337), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 244/349 (69%), Positives = 291/349 (83%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 103 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 162
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 222
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD
Sbjct: 223 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDAD 282
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQC CAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 283 MDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 342
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 343 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 402
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 403 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 451

>pdb|1AG8|A Chain A, Aldehyde Dehydrogenase From Bovine Mitochondria Length = 499

Iteration: 1
 Score =  516 bits (1329), Expect = e-147,   Method: Compositional matrix adjust.
 Identities = 240/349 (68%), Positives = 289/349 (82%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GD+F+YTRHEPVGVC
Sbjct: 102 AALETLDNGKPYIISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDYFSYTRHEPVGVC 161
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVN++P
Sbjct: 162 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNVIP 221
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTEVG L+Q  +G SNLKR TLE+GGKSPNII +DAD
Sbjct: 222 GFGPTAGAAIASHEDVDKVAFTGSTEVGHLIQVAAGKSNLKRVTLEIGGKSPNIIMSDAD 281
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQCCCAGSRTFVQ+ IY EFV RS  RAK R VG+PFD   EQG
Sbjct: 282 MDWAVEQAHFALFFNQGQCCCAGSRTFVQEDIYAEFVERSVARAKSRVVGNPFDSRTEQG 341
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  K+L +I+SGK +G +L+ GGG A D+G+++QPTVF +++D M IA+EEIFG
Sbjct: 342 PQVDETQFKKVLGYIKSGKEEGLKLLCGGGAAADRGYFIQPTVFGDLQDGMTIAKEEIFG 401
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F S+EEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 402 PVMQILKFKSMEEVVGRANNSKYGLAAAVFTKDLDKANYLSQALQAGTV 450

>pdb|4FR8|A Chain A, Crystal Structure Of Human Aldehyde Dehydrogenase-2 In Complex With Nitroglycerin Length = 500

Iteration: 1
 Score =  515 bits (1327), Expect = e-146,   Method: Compositional matrix adjust.
 Identities = 242/349 (69%), Positives = 290/349 (83%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVC
Sbjct: 103 AALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC 162
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVP
Sbjct: 163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVP 222
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TL+LGGKSPNII +DAD
Sbjct: 223 GFGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLQLGGKSPNIIMSDAD 282
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +D AVE AHF LFFN GQ C AGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQG
Sbjct: 283 MDWAVEQAHFALFFNQGQSCSAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQG 342
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQ+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFG
Sbjct: 343 PQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG 402
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PV Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT+
Sbjct: 403 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTV 451

>pdb|1BI9|A Chain A, Retinal Dehydrogenase Type Two With Nad Bound Length = 499

Iteration: 1
 Score =  511 bits (1317), Expect = e-145,   Method: Compositional matrix adjust.
 Identities = 234/349 (67%), Positives = 294/349 (84%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +++E+L+ GKP+  ++ +D++  ++TLRYYAG+ADKIHG TIP++GD+F +TRHEP+GVC
Sbjct: 102 ATMESLNGGKPFLQAFYIDLQGVIKTLRYYAGWADKIHGMTIPVDGDYFTFTRHEPIGVC 161
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM  WKIAPAL  GNT+V+KPAEQTPL+AL +GALI EAG P GVVNI+P
Sbjct: 162 GQIIPWNFPLLMFTWKIAPALCCGNTVVIKPAEQTPLSALYMGALIKEAGFPPGVVNILP 221
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           GYG  AGAA+  H G+DK+AFTGSTEVGKL+Q+ +G SNLKR TLELGGKSPNIIFADAD
Sbjct: 222 GYGPTAGAAIASHIGIDKIAFTGSTEVGKLIQEAAGRSNLKRVTLELGGKSPNIIFADAD 281
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD AVE AH G+FFN GQCC AGSR FV+++IY+EFV RS ERAKRR VG PFD   EQG
Sbjct: 282 LDYAVEQAHQGVFFNQGQCCTAGSRIFVEESIYEEFVKRSVERAKRRIVGSPFDPTTEQG 341
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQIDK+Q +KILE I+SG ++GA+L  GG   G KGF+++PTVF+NV DDM+IA+EEIFG
Sbjct: 342 PQIDKKQYNKILELIQSGVAEGAKLECGGKGLGRKGFFIEPTVFSNVTDDMRIAKEEIFG 401
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQ+++RF +++EVIERANNSD+GL AAVFT D++K   V+  ++AGT+
Sbjct: 402 PVQEILRFKTMDEVIERANNSDFGLVAAVFTNDINKALMVSSAMQAGTV 450

>pdb|1BXS|A Chain A, Sheep Liver Class 1 Aldehyde Dehydrogenase With Nad Bound Length = 501

Iteration: 1
 Score =  475 bits (1222), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 221/349 (63%), Positives = 286/349 (81%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           +++E ++ GK ++ +Y +D+   ++TLRY AG+ADKI G+TIP++G+FF YTR EPVGVC
Sbjct: 104 ATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVC 163
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           GQIIPWNFPLLM  WKI PAL+ GNT+V+KPAEQTPLTAL +G+LI EAG P GVVNIVP
Sbjct: 164 GQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVP 223
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           GYG  AGAA+  H  VDKVAFTGSTEVGKL+++ +G SNLKR +LELGGKSP I+FADAD
Sbjct: 224 GYGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADAD 283
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD AVE AH G+F++ GQCC A SR FV+++IYDEFV RS ERAK+  +G+P    V QG
Sbjct: 284 LDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQG 343
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQIDKEQ +KIL+ IESGK +GA+L  GGG  G+KG+++QPTVF++V DDM+IA+EEIFG
Sbjct: 344 PQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFG 403
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQQ+++F S+++VI+RANN+ YGL+A +FT D+DK   V+  L++GT+
Sbjct: 404 PVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTV 452

>pdb|1O9J|A Chain A, The X-Ray Crystal Structure Of Eta-Crystallin Length = 501

Iteration: 1
 Score =  463 bits (1192), Expect = e-131,   Method: Compositional matrix adjust.
 Identities = 216/349 (61%), Positives = 278/349 (79%), Gaps = 1/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           ++LE+++ GK +  +Y +D++Y ++ LRY AG+ADKI G+TIP++G+FF+YTRHEP+GVC
Sbjct: 104 ATLESINAGKVFASAYLMDLDYCIKALRYCAGWADKIQGRTIPVDGEFFSYTRHEPIGVC 163
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           G I PWN P+++LA KI PAL  GNT+++KPAEQTPLTAL V +LI EAG P GVVNIVP
Sbjct: 164 GLIFPWNAPMILLACKIGPALCCGNTVIVKPAEQTPLTALHVASLIKEAGFPPGVVNIVP 223
Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           GYG  AGAA+  H  VDKVAFTGSTEVGK++Q+ +  SNLKR TLELG K+P I+FADAD
Sbjct: 224 GYGPTAGAAISSHMDVDKVAFTGSTEVGKMIQEAAAKSNLKRVTLELGAKNPCIVFADAD 283
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD+AVE AH G+F N GQ C A S+ FV++ IYDEFV RS ERAK+   G+P    V  G
Sbjct: 284 LDSAVEFAHQGVFTNQGQSCIAASKLFVEEAIYDEFVQRSVERAKKYVFGNPLTPGVNHG 343
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           PQI+K Q +KI+E IESGK +GA+L  GGG  G+KG+++QPTVF+NV DDM+IA+EEIFG
Sbjct: 344 PQINKAQHNKIMELIESGKKEGAKLECGGGPWGNKGYFIQPTVFSNVTDDMRIAKEEIFG 403
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           PVQQ+++F S++EVI+RANN+ YGL A VFTKDLDK   V+  L+AGT+
Sbjct: 404 PVQQIMKFKSLDEVIKRANNTYYGLVAGVFTKDLDKAVTVSSALQAGTV 452

>pdb|2O2P|A Chain A, Crystal Structure Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  347 bits (890), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 179/404 (44%), Positives = 254/404 (62%), Gaps = 21/404 (5%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN----GDFFAYTRHEP 105
           +++E LD G  Y ++    V  S++T RY+AG+ DKI G TIPIN          T+ EP
Sbjct: 119 ATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEP 178
Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           VGVCG +IPWN+PL+ML+WK A  LA GNT+V+KPA+ TPLTAL    L  +AGIP+GVV
Sbjct: 179 VGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVV 238
Query: 166 NIVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           NI+PG G   G  L  HP V K+ FTGSTEVGK + +    SN+K+ +LELGGKSP IIF
Sbjct: 239 NILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIF 298
Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
           AD DL+ AV+     +FFN G+ C A  R FV+++I+++FV +  E  ++  +G+P + +
Sbjct: 299 ADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
              GPQ  +  + K++E+ + G  +GA LV GG +    GF+ QPTVF +V D M IA+E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 345 EIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS 402
           E FGP+  + RF+   ++ V+ RAN +++GLA+ VFT+D++K  YV+  L+AGT+     
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVF---- 474
Query: 403 IEEVIERANNSDY-----GLAAAVFTKDLDKTNYVTQGLRAGTV 441
               I   N +D      G   + F KDL +   + + LR  TV
Sbjct: 475 ----INTYNKTDVAAPFGGFKQSGFGKDLGEA-ALNEYLRIKTV 513

>pdb|3RHM|A Chain A, Crystal Structure Of The E673q Mutant Of C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase Length = 517

Iteration: 1
 Score =  346 bits (887), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 178/404 (44%), Positives = 254/404 (62%), Gaps = 21/404 (5%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN----GDFFAYTRHEP 105
           +++E LD G  Y ++    V  S++T RY+AG+ DKI G TIPIN          T+ EP
Sbjct: 119 ATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEP 178
Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           VGVCG +IPWN+PL+ML+WK A  LA GNT+V+KPA+ TPLTAL    L  +AGIP+GVV
Sbjct: 179 VGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVV 238
Query: 166 NIVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           NI+PG G   G  L  HP V K+ FTGSTEVGK + +    SN+K+ +L+LGGKSP IIF
Sbjct: 239 NILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLQLGGKSPLIIF 298
Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
           AD DL+ AV+     +FFN G+ C A  R FV+++I+++FV +  E  ++  +G+P + +
Sbjct: 299 ADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
              GPQ  +  + K++E+ + G  +GA LV GG +    GF+ QPTVF +V D M IA+E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 345 EIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS 402
           E FGP+  + RF+   ++ V+ RAN +++GLA+ VFT+D++K  YV+  L+AGT+     
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVF---- 474
Query: 403 IEEVIERANNSDY-----GLAAAVFTKDLDKTNYVTQGLRAGTV 441
               I   N +D      G   + F KDL +   + + LR  TV
Sbjct: 475 ----INTYNKTDVAAPFGGFKQSGFGKDLGEA-ALNEYLRIKTV 513

>pdb|3RHJ|A Chain A, Crystal Structure Of The E673a Mutant Of The C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  344 bits (883), Expect = 4e-95,   Method: Compositional matrix adjust.
 Identities = 178/404 (44%), Positives = 253/404 (62%), Gaps = 21/404 (5%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN----GDFFAYTRHEP 105
           +++E LD G  Y ++    V  S++T RY+AG+ DKI G TIPIN          T+ EP
Sbjct: 119 ATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEP 178
Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           VGVCG +IPWN+PL+ML+WK A  LA GNT+V+KPA+ TPLTAL    L  +AGIP+GVV
Sbjct: 179 VGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVV 238
Query: 166 NIVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           NI+PG G   G  L  HP V K+ FTGSTEVGK + +    SN+K+ +L LGGKSP IIF
Sbjct: 239 NILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIF 298
Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
           AD DL+ AV+     +FFN G+ C A  R FV+++I+++FV +  E  ++  +G+P + +
Sbjct: 299 ADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
              GPQ  +  + K++E+ + G  +GA LV GG +    GF+ QPTVF +V D M IA+E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 345 EIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS 402
           E FGP+  + RF+   ++ V+ RAN +++GLA+ VFT+D++K  YV+  L+AGT+     
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVF---- 474
Query: 403 IEEVIERANNSDY-----GLAAAVFTKDLDKTNYVTQGLRAGTV 441
               I   N +D      G   + F KDL +   + + LR  TV
Sbjct: 475 ----INTYNKTDVAAPFGGFKQSGFGKDLGEA-ALNEYLRIKTV 513

>pdb|3RHR|A Chain A, Crystal Structure Of The C707a Mutant Of The C-Terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadph Length = 517

Iteration: 1
 Score =  343 bits (879), Expect = 1e-94,   Method: Compositional matrix adjust.
 Identities = 178/404 (44%), Positives = 253/404 (62%), Gaps = 21/404 (5%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN----GDFFAYTRHEP 105
           +++E LD G  Y ++    V  S++T RY+AG+ DKI G TIPIN          T+ EP
Sbjct: 119 ATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEP 178
Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           VGVCG +IPWN+PL+ML+WK A  LA GNT+V+KPA+ TPLTAL    L  +AGIP+GVV
Sbjct: 179 VGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVV 238
Query: 166 NIVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           NI+PG G   G  L  HP V K+ FTGSTEVGK + +    SN+K+ +LELGGKSP IIF
Sbjct: 239 NILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIF 298
Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
           AD DL+ AV+     +FFN G+   A  R FV+++I+++FV +  E  ++  +G+P + +
Sbjct: 299 ADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
              GPQ  +  + K++E+ + G  +GA LV GG +    GF+ QPTVF +V D M IA+E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 345 EIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS 402
           E FGP+  + RF+   ++ V+ RAN +++GLA+ VFT+D++K  YV+  L+AGT+     
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVF---- 474
Query: 403 IEEVIERANNSDY-----GLAAAVFTKDLDKTNYVTQGLRAGTV 441
               I   N +D      G   + F KDL +   + + LR  TV
Sbjct: 475 ----INTYNKTDVAAPFGGFKQSGFGKDLGEA-ALNEYLRIKTV 513

>pdb|4GNZ|A Chain A, Crystal Structure Of The C707s Mutant Of C-terminal Domain Of 10'formyltetrahydrofolate Dehydrogenase In Complex With Nadp Length = 517

Iteration: 1
 Score =  342 bits (878), Expect = 2e-94,   Method: Compositional matrix adjust.
 Identities = 178/404 (44%), Positives = 253/404 (62%), Gaps = 21/404 (5%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN----GDFFAYTRHEP 105
           +++E LD G  Y ++    V  S++T RY+AG+ DKI G TIPIN          T+ EP
Sbjct: 119 ATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEP 178
Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           VGVCG +IPWN+PL+ML+WK A  LA GNT+V+KPA+ TPLTAL    L  +AGIP+GVV
Sbjct: 179 VGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVV 238
Query: 166 NIVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           NI+PG G   G  L  HP V K+ FTGSTEVGK + +    SN+K+ +LELGGKSP IIF
Sbjct: 239 NILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIF 298
Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
           AD DL+ AV+     +FFN G+   A  R FV+++I+++FV +  E  ++  +G+P + +
Sbjct: 299 ADCDLNKAVQMGMSSVFFNKGENSIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
              GPQ  +  + K++E+ + G  +GA LV GG +    GF+ QPTVF +V D M IA+E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 345 EIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS 402
           E FGP+  + RF+   ++ V+ RAN +++GLA+ VFT+D++K  YV+  L+AGT+     
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVF---- 474
Query: 403 IEEVIERANNSDY-----GLAAAVFTKDLDKTNYVTQGLRAGTV 441
               I   N +D      G   + F KDL +   + + LR  TV
Sbjct: 475 ----INTYNKTDVAAPFGGFKQSGFGKDLGEA-ALNEYLRIKTV 513

>pdb|3RHL|A Chain A, Crystal Structure Of The E673aC707A DOUBLE MUTANT OF THE C-Terminal Domain Of Rat 10'formyltetrahydrofolate Dehydrogenase In Complex With Co-Purified Nadp Length = 517

Iteration: 1
 Score =  340 bits (872), Expect = 9e-94,   Method: Compositional matrix adjust.
 Identities = 177/404 (43%), Positives = 252/404 (62%), Gaps = 21/404 (5%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN----GDFFAYTRHEP 105
           +++E LD G  Y ++    V  S++T RY+AG+ DKI G TIPIN          T+ EP
Sbjct: 119 ATIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEP 178
Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           VGVCG +IPWN+PL+ML+WK A  LA GNT+V+KPA+ TPLTAL    L  +AGIP+GVV
Sbjct: 179 VGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVV 238
Query: 166 NIVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           NI+PG G   G  L  HP V K+ FTGSTEVGK + +    SN+K+ +L LGGKSP IIF
Sbjct: 239 NILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLALGGKSPLIIF 298
Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
           AD DL+ AV+     +FFN G+   A  R FV+++I+++FV +  E  ++  +G+P + +
Sbjct: 299 ADCDLNKAVQMGMSSVFFNKGENAIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERD 358
Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
              GPQ  +  + K++E+ + G  +GA LV GG +    GF+ QPTVF +V D M IA+E
Sbjct: 359 TNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKE 418
Query: 345 EIFGPVQQLIRFS--SIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS 402
           E FGP+  + RF+   ++ V+ RAN +++GLA+ VFT+D++K  YV+  L+AGT+     
Sbjct: 419 ESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVF---- 474
Query: 403 IEEVIERANNSDY-----GLAAAVFTKDLDKTNYVTQGLRAGTV 441
               I   N +D      G   + F KDL +   + + LR  TV
Sbjct: 475 ----INTYNKTDVAAPFGGFKQSGFGKDLGEA-ALNEYLRIKTV 513

>pdb|2WOX|A Chain A, Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa With Nad(P)h-Catalytic Thiol Adduct. Length = 489

Iteration: 1
 Score =  323 bits (827), Expect = 1e-88,   Method: Compositional matrix adjust.
 Identities = 167/372 (44%), Positives = 227/372 (61%), Gaps = 5/372 (1%)
Query: 29  ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG 88
           + + +I    + I  E  +  ++LETLD GKP   + SVD+      L YYAG    I G
Sbjct: 65  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 89  KTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA 148
           + IP+    F YTR EP+GV   I  WN+P+ +  WK APALA GN ++ KP+E TPLTA
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 149 LAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASN 207
           L +  +  EAG+P+GV N++ G G + G  L +HP ++K++FTG T  GK V   + +S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 208 LKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267
           LK  T+ELGGKSP IIF DADLD A + A    FF+ GQ C  G+R F+  +    F A+
Sbjct: 245 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD----K 323
             ER +R  +GDP D N   GP +    M+ +L +IESGK+Q A+L+ GG R  D    K
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 364
Query: 324 GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLD 383
           G YV PTVF + RDDM I REEIFGPV  ++ +   +E I RAN+++YGLAA V T+DL 
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 424
Query: 384 KTNYVTQGLRAG 395
           + +     L AG
Sbjct: 425 RAHRAIHRLEAG 436

>pdb|2WME|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  323 bits (827), Expect = 2e-88,   Method: Compositional matrix adjust.
 Identities = 167/372 (44%), Positives = 227/372 (61%), Gaps = 5/372 (1%)
Query: 29  ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG 88
           + + +I    + I  E  +  ++LETLD GKP   + SVD+      L YYAG    I G
Sbjct: 66  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 125
Query: 89  KTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA 148
           + IP+    F YTR EP+GV   I  WN+P+ +  WK APALA GN ++ KP+E TPLTA
Sbjct: 126 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 149 LAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASN 207
           L +  +  EAG+P+GV N++ G G + G  L +HP ++K++FTG T  GK V   + +S+
Sbjct: 186 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 208 LKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267
           LK  T+ELGGKSP IIF DADLD A + A    FF+ GQ C  G+R F+  +    F A+
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 305
Query: 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD----K 323
             ER +R  +GDP D N   GP +    M+ +L +IESGK+Q A+L+ GG R  D    K
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 365
Query: 324 GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLD 383
           G YV PTVF + RDDM I REEIFGPV  ++ +   +E I RAN+++YGLAA V T+DL 
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425
Query: 384 KTNYVTQGLRAG 395
           + +     L AG
Sbjct: 426 RAHRAIHRLEAG 437

>pdb|2XDR|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant E252a From Pseudomonas Aeruginosa Length = 489

Iteration: 1
 Score =  320 bits (821), Expect = 8e-88,   Method: Compositional matrix adjust.
 Identities = 166/372 (44%), Positives = 226/372 (60%), Gaps = 5/372 (1%)
Query: 29  ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG 88
           + + +I    + I  E  +  ++LETLD GKP   + SVD+      L YYAG    I G
Sbjct: 65  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 124
Query: 89  KTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA 148
           + IP+    F YTR EP+GV   I  WN+P+ +  WK APALA GN ++ KP+E TPLTA
Sbjct: 125 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 184
Query: 149 LAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASN 207
           L +  +  EAG+P+GV N++ G G + G  L +HP ++K++FTG T  GK V   + +S+
Sbjct: 185 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 244
Query: 208 LKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267
           LK  T+ LGGKSP IIF DADLD A + A    FF+ GQ C  G+R F+  +    F A+
Sbjct: 245 LKEVTMALGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAK 304
Query: 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD----K 323
             ER +R  +GDP D N   GP +    M+ +L +IESGK+Q A+L+ GG R  D    K
Sbjct: 305 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 364
Query: 324 GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLD 383
           G YV PTVF + RDDM I REEIFGPV  ++ +   +E I RAN+++YGLAA V T+DL 
Sbjct: 365 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 424
Query: 384 KTNYVTQGLRAG 395
           + +     L AG
Sbjct: 425 RAHRAIHRLEAG 436

>pdb|3R31|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Agrobacterium Tumefaciens Length = 517

Iteration: 1
 Score =  319 bits (817), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 169/378 (44%), Positives = 227/378 (60%), Gaps = 6/378 (1%)
Query: 24  AVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFA 83
           A   P+ + +I      I  E  +A S+LETLD GKP   +   D         ++ G A
Sbjct: 69  AAMSPMARGRILKRAADIMRERNDALSTLETLDTGKPIQETIVADPTSGADAFEFFGGIA 128
Query: 84  -DKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAE 142
              ++G  IP+ GDF AYT+  P+GVC  I  WN+P  +  WK APAL  GN +V KP+E
Sbjct: 129 PSALNGDYIPLGGDF-AYTKRVPLGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSE 187
Query: 143 QTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQG 202
            TPL AL +  ++ EAG+P+G+ N++ G  D G  LV HP V KV+ TGS   G+ V   
Sbjct: 188 NTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVAKVSLTGSVPTGRKV-AA 246
Query: 203 SGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD 262
           + A +LK  T+ELGGKSP I+F DAD+++AV GA  G F++ GQ C  G+R FVQ     
Sbjct: 247 AAAGHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKA 306
Query: 263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGG---R 319
            F+     R +   +GDP D     GP + K Q +K+L +IE GK++GA L+ GGG    
Sbjct: 307 RFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNN 366
Query: 320 AGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFT 379
              +G YVQPTVFA+V DDM IAREEIFGPV  ++ F   +EV+ RAN +++GLA  VFT
Sbjct: 367 VAGEGAYVQPTVFADVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFT 426
Query: 380 KDLDKTNYVTQGLRAGTL 397
            DL + + V  GL AGTL
Sbjct: 427 ADLARAHRVVDGLEAGTL 444

>pdb|3ZQA|A Chain A, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase Mutant C286a From Pseudomonas Aeruginosa In Complex With Nadph Length = 490

Iteration: 1
 Score =  318 bits (816), Expect = 3e-87,   Method: Compositional matrix adjust.
 Identities = 166/372 (44%), Positives = 226/372 (60%), Gaps = 5/372 (1%)
Query: 29  ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG 88
           + + +I    + I  E  +  ++LETLD GKP   + SVD+      L YYAG    I G
Sbjct: 66  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 125
Query: 89  KTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA 148
           + IP+    F YTR EP+GV   I  WN+P+ +  WK APALA GN ++ KP+E TPLTA
Sbjct: 126 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 149 LAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASN 207
           L +  +  EAG+P+GV N++ G G + G  L +HP ++K++FTG T  GK V   + +S+
Sbjct: 186 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 208 LKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267
           LK  T+ELGGKSP IIF DADLD A + A    FF+ GQ    G+R F+  +    F A+
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVATNGTRVFIHRSQQARFEAK 305
Query: 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD----K 323
             ER +R  +GDP D N   GP +    M+ +L +IESGK+Q A+L+ GG R  D    K
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 365
Query: 324 GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLD 383
           G YV PTVF + RDDM I REEIFGPV  ++ +   +E I RAN+++YGLAA V T+DL 
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425
Query: 384 KTNYVTQGLRAG 395
           + +     L AG
Sbjct: 426 RAHRAIHRLEAG 437

>pdb|2WME|C Chain C, Crystallographic Structure Of Betaine Aldehyde Dehydrogenase From Pseudomonas Aeruginosa Length = 490

Iteration: 1
 Score =  318 bits (815), Expect = 4e-87,   Method: Compositional matrix adjust.
 Identities = 166/372 (44%), Positives = 226/372 (60%), Gaps = 5/372 (1%)
Query: 29  ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG 88
           + + +I    + I  E  +  ++LETLD GKP   + SVD+      L YYAG    I G
Sbjct: 66  MQRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEG 125
Query: 89  KTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA 148
           + IP+    F YTR EP+GV   I  WN+P+ +  WK APALA GN ++ KP+E TPLTA
Sbjct: 126 EQIPLRETSFVYTRREPLGVVAGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTA 185
Query: 149 LAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASN 207
           L +  +  EAG+P+GV N++ G G + G  L +HP ++K++FTG T  GK V   + +S+
Sbjct: 186 LKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKISFTGGTSTGKKVMASASSSS 245
Query: 208 LKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267
           LK  T+ELGGKSP IIF DADLD A + A    FF+ GQ    G+R F+  +    F A+
Sbjct: 246 LKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVXTNGTRVFIHRSQQARFEAK 305
Query: 268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD----K 323
             ER +R  +GDP D N   GP +    M+ +L +IESGK+Q A+L+ GG R  D    K
Sbjct: 306 VLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGK 365
Query: 324 GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLD 383
           G YV PTVF + RDDM I REEIFGPV  ++ +   +E I RAN+++YGLAA V T+DL 
Sbjct: 366 GAYVAPTVFTDCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLA 425
Query: 384 KTNYVTQGLRAG 395
           + +     L AG
Sbjct: 426 RAHRAIHRLEAG 437

>pdb|1A4S|A Chain A, Betaine Aldehyde Dehydrogenase From Cod Liver Length = 503

Iteration: 1
 Score =  305 bits (780), Expect = 4e-83,   Method: Compositional matrix adjust.
 Identities = 152/353 (43%), Positives = 213/353 (60%), Gaps = 8/353 (2%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           + LE ++NGK    +   D++ + + + YYAG A  + G+ I + G  FAYTR EP+GVC
Sbjct: 101 AKLEVINNGKTITEA-EYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVC 159
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             I+ WN+P ++ AWK APALA GN +V KP+  TP+T + +  +  EAG+P G+VN+V 
Sbjct: 160 AGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQ 219
Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G  + G+ L  HP V KV+FTGS   GK V + S A  +K  TLELGGKSP +IF D +L
Sbjct: 220 GGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS-AKTVKHVTLELGGKSPLLIFKDCEL 278
Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           + AV GA    F   GQ C  G+R FVQ  I  +F+    +R K   VGDP       G 
Sbjct: 279 ENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGG 338
Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAG------DKGFYVQPTVFANVRDDMKIAR 343
            I K Q+DK+L F+   K +GA+++ GG            G+++ P V  N RDDM   +
Sbjct: 339 LISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVK 398
Query: 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           EEIFGPV  ++ F + EEV++RANN+ +GLA+ VFT+D+ + + V   L AGT
Sbjct: 399 EEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451

>pdb|4A0M|A Chain A, Crystal Structure Of Betaine Aldehyde Dehydrogenase From Spinach In Complex With Nad Length = 496

Iteration: 1
 Score =  303 bits (775), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 160/354 (45%), Positives = 223/354 (62%), Gaps = 11/354 (3%)
Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-----TIPINGDFFAYTRHEPV 106
           LET+D+GKP++ +  +D++       Y+AG A+ + GK     T+P+   F ++   +P+
Sbjct: 92  LETIDSGKPFDEAV-LDIDDVASCFEYFAGQAEALDGKQKAPVTLPME-RFKSHVLRQPL 149
Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVN 166
           GV G I PWN+PLLM  WKIAPALA G T VLKP+E   +T L  G +  E G+P GV+N
Sbjct: 150 GVVGLISPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLEFGEVCNEVGLPPGVLN 209
Query: 167 IVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
           I+ G G DAGA LV HP VDK+AFTGS+  G  V   S A  +K  TLELGGKSP ++F 
Sbjct: 210 ILTGLGPDAGAPLVSHPDVDKIAFTGSSATGSKVM-ASAAQLVKPVTLELGGKSPIVVFE 268
Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
           D D+D  VE   FG F+  GQ C A SR  V ++I  EFV +  +  K   + DPF+   
Sbjct: 269 DVDIDKVVEWTIFGCFWTNGQICSATSRLLVHESIAAEFVDKLVKWTKNIKISDPFEEGC 328
Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIAR 343
             GP I K Q DKI++FI + KS+GA ++ GG R     KG+Y++PT+  ++   M+I +
Sbjct: 329 RLGPVISKGQYDKIMKFISTAKSEGATILYGGSRPEHLKKGYYIEPTIVTDISTSMQIWK 388
Query: 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           EE+FGPV  +  FSS +E I  AN+++YGLAAAVF+ DL++   +T+ L  G +
Sbjct: 389 EEVFGPVLCVKTFSSEDEAIALANDTEYGLAAAVFSNDLERCERITKALEVGAV 442

>pdb|2D4E|A Chain A, Crystal Structure Of The Hpcc From Thermus Thermophilus Hb8 Length = 515

Iteration: 1
 Score =  286 bits (733), Expect = 1e-77,   Method: Compositional matrix adjust.
 Identities = 154/356 (43%), Positives = 222/356 (62%), Gaps = 13/356 (3%)
Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADK-IHGKTIPINGDFFAYTRHEPVGVCG 110
           +E LD G+   +  +  V  +     +YA +A+  +  +T P++ D+  YT   P G  G
Sbjct: 109 MECLDAGQVLRIVRA-QVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPVG 167
Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
            I PWN PL++  W+IAPALA GNT+VLKPAE +P TA  +  ++ EA +P GV N+V G
Sbjct: 168 IITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQG 227
Query: 171 YGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           +G+ AGAALV HP V  +  TG TE GK+V + + A +LKR + ELGGKSP ++FADADL
Sbjct: 228 FGEEAGAALVAHPLVPLLTLTGETETGKIVMR-NAADHLKRLSPELGGKSPALVFADADL 286
Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           + A++   F +F   G+ C A SR  V++ I+++FV +  ERA+   VG P D   E GP
Sbjct: 287 ERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGP 346
Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--------DKGFYVQPTVFANVRDDMKI 341
            I  E + ++L ++E+GK +GA+L+ GG RA          +G Y+ PTVF    + MKI
Sbjct: 347 LIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMKI 405
Query: 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           A+EEIFGPV   I F   EE + +AN++ YGLAA VFT+DL++ + +   L AG +
Sbjct: 406 AQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMV 461

>pdb|4I8P|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1a From Zea Mays (zmamadh1a) Length = 520

Iteration: 1
 Score =  284 bits (726), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 155/356 (43%), Positives = 215/356 (60%), Gaps = 11/356 (3%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-----TIPINGDFFAYTRHE 104
           + LE LD GKPY+ + + D++       Y+A  A+ +  +     ++P+   F  + R E
Sbjct: 110 AKLEALDCGKPYDEA-AWDMDDVAGCFEYFADQAEALDKRQNSPVSLPME-TFKCHLRRE 167
Query: 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGV 164
           P+GV G I PWN+PLLM  WKIAPALA G T VLKP+E   +T L +  +  E G+P GV
Sbjct: 168 PIGVVGLITPWNYPLLMATWKIAPALAAGCTAVLKPSELASVTCLELADICKEVGLPSGV 227
Query: 165 VNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNII 223
           +NIV G G DAGA L  HP VDKVAFTGS E GK +   S A  +K  TLELGGKSP ++
Sbjct: 228 LNIVTGLGPDAGAPLSAHPDVDKVAFTGSFETGKKIM-ASAAPMVKPVTLELGGKSPIVV 286
Query: 224 FADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDL 283
           F D D+D AVE   FG F+  GQ C A SR  +   I  +F  R    AK   V DP + 
Sbjct: 287 FDDVDIDKAVEWTLFGCFWTNGQICSATSRLLIHTKIAKKFNERMVAWAKNIKVSDPLEE 346
Query: 284 NVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKI 341
               GP + + Q +KI +FI + KSQGA ++ GG R    +KGF+++PT+  ++   M+I
Sbjct: 347 GCRLGPVVSEGQYEKIKKFISNAKSQGATILTGGVRPAHLEKGFFIEPTIITDITTSMEI 406
Query: 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            REE+FGPV  +  FS+ +E IE AN++ YGLA AV + D ++   +++ + AG +
Sbjct: 407 WREEVFGPVLCVKEFSTEDEAIELANDTQYGLAGAVISGDRERCQRLSEEIDAGCI 462

>pdb|3ED6|A Chain A, 1.7 Angstrom Resolution Crystal Structure Of Betaine Aldehyde Dehydrogenase (Betb) From Staphylococcus Aureus Length = 520

Iteration: 1
 Score =  281 bits (720), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 158/361 (43%), Positives = 219/361 (60%), Gaps = 10/361 (2%)
Query: 44  EFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI--PINGDFFAYT 101
           E   A + LETLD GK    SY+ D++       Y+AG ADK  G+ I  PI  D  +  
Sbjct: 109 EHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIP-DTESKI 166
Query: 102 RHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIP 161
             EPVGV  QI PWN+PLL  +WKIAPALATG ++V+KP+E TPLT + V  L+ E G P
Sbjct: 167 VKEPVGVVTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFP 226
Query: 162 EGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSP 220
           +G +N++ G G + G  +  H  VD V+FTG  E GK + + + A+N+    LELGGK+P
Sbjct: 227 KGTINLILGAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMK-NAANNVTNIALELGGKNP 285
Query: 221 NIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDP 280
           NIIF DAD + AV+ A  G +F+ GQ C AGSR  VQ++I D+F     +R K+  +G+ 
Sbjct: 286 NIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNG 345
Query: 281 FDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVR 336
           FD + E GP I  E  +KI  +++  K++GA +  GG R        G + +PTV  N  
Sbjct: 346 FDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCD 405
Query: 337 DDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
             M+I +EE+FGPV  +  F + +E I+ AN+S YGLA AVF+KD+ K   V   L+ GT
Sbjct: 406 TSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGT 465
Query: 397 L 397
           +
Sbjct: 466 V 466

>pdb|3IWJ|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 2 From Pisum Sativum (Psamadh2) Length = 503

Iteration: 1
 Score =  274 bits (700), Expect = 9e-74,   Method: Compositional matrix adjust.
 Identities = 149/356 (41%), Positives = 221/356 (62%), Gaps = 11/356 (3%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-----TIPINGDFFAYTRHE 104
           + LE++D GKP + + + D++       YYA  A+K+  +     ++P++  F ++   E
Sbjct: 93  AKLESIDCGKPLDEA-AWDIDDVAGCFEYYADLAEKLDARQKAPVSLPMD-TFKSHVLRE 150
Query: 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGV 164
           P+GV G I PWN+P+LM  WK+APALA G   +LKP+E   LT L +G +  E G+P GV
Sbjct: 151 PIGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGV 210
Query: 165 VNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNII 223
           +NI+ G G +AGA L  HP VDKVAFTGS+  G  +   + A  +K  +LELGGKSP ++
Sbjct: 211 LNILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAA-AQLVKPVSLELGGKSPLVV 269
Query: 224 FADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDL 283
           F D DLD A E A FG F+  GQ C A SR  + ++I  EF+ R  +  K   + DP + 
Sbjct: 270 FEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEE 329
Query: 284 NVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKI 341
               GP + + Q +KIL+F+ + KS+GA ++ GG R     KGF+++PT+  +V  +M+I
Sbjct: 330 GCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQI 389
Query: 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            REE+FGPV  +  FS+ EE I+ AN++ YGL AAV + DL++   VT+  +AG +
Sbjct: 390 WREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIV 445

>pdb|3IWK|A Chain A, Crystal Structure Of Aminoaldehyde Dehydrogenase 1 From Pisum Sativum (Psamadh1) Length = 503

Iteration: 1
 Score =  269 bits (687), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 147/354 (41%), Positives = 215/354 (60%), Gaps = 11/354 (3%)
Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-----TIPINGDFFAYTRHEPV 106
           LE++D GKP   + + D++  +    YYAG A+++  K     ++P++  F +Y   EP+
Sbjct: 95  LESIDCGKPLEEALA-DLDDVVACFEYYAGLAEELDSKQKAPISLPMD-TFKSYILKEPI 152
Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVN 166
           GV   I PWN+P LM  WKIAPALA G   +LKP+E   +T L +G +  E G+P GV+N
Sbjct: 153 GVVALITPWNYPFLMATWKIAPALAAGCAAILKPSELASVTCLELGEICKEVGLPRGVLN 212
Query: 167 IVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
           IV G G +AGA+L  HP VDK++FTGS+  G  +   + A  +K  +LELGGKSP ++F 
Sbjct: 213 IVTGLGHEAGASLASHPDVDKISFTGSSATGSKIMT-TAAQLVKPVSLELGGKSPIVVFE 271
Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
           D DLD   E   FG FF  GQ C A SR  V ++I  EFV +  + A+   + DP +   
Sbjct: 272 DVDLDKVAEWTVFGCFFTNGQICSATSRLIVHESIAVEFVDKLVKWAENIKISDPLEEGC 331
Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIAR 343
             GP + + Q  K+L  I S KS+GA ++ GG R     KG++V+PT+  +V   M+I R
Sbjct: 332 RLGPIVSEAQYKKVLNCISSAKSEGATILTGGRRPEHLKKGYFVEPTIITDVTTSMQIWR 391
Query: 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           EE+FGPV  +  FS+ EE I  AN++ YGL +AV + DL++   +++ L+AG +
Sbjct: 392 EEVFGPVLAVKTFSTEEEAINLANDTHYGLGSAVMSNDLERCERLSKALQAGIV 445

>pdb|4DAL|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 498

Iteration: 1
 Score =  260 bits (664), Expect = 1e-69,   Method: Compositional matrix adjust.
 Identities = 144/354 (40%), Positives = 207/354 (58%), Gaps = 15/354 (4%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFF----AYTRHEP 105
           ++LE L+ GKP N   + ++   +   R++AG    +H    P  G++     +  R +P
Sbjct: 105 AALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHA---PAAGEYLPGHTSXIRRDP 161
Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           +G+ G I PWN+PL   AWK+APA+  GNT+V KP+EQTPLTAL +  LIA+  +PEGVV
Sbjct: 162 IGIVGSIAPWNYPLXXXAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVV 220
Query: 166 NIVPGYGDA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           N++ G G+  G AL+ HP V  V+ TG    GK V   + A  +KRT LELGGK+P I++
Sbjct: 221 NVITGRGETVGNALINHPKVGXVSITGDIATGKKV-LAAAAKTVKRTHLELGGKAPVIVY 279
Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVA--RSGERAKRRTVGDPFD 282
            DADL+A V G     ++N GQ C A  R + +  IY++ VA   S     R  + D  D
Sbjct: 280 GDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDD--D 337
Query: 283 LNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKI 341
              E GP I + Q D++  F+E    Q    +  GGR G D+GF+ QPTV A    + +I
Sbjct: 338 TENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEI 397
Query: 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
            R E+FGPV  + RF+  ++ +  AN+SDYGLA++V+TKD+ K       L+ G
Sbjct: 398 VRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAXRAASRLQYG 451

>pdb|4I9B|A Chain A, Structure Of Aminoaldehyde Dehydrogenase 1 From Solanum Lycopersium (slamadh1) With A Thiohemiacetal Intermediate Length = 517

Iteration: 1
 Score =  258 bits (660), Expect = 4e-69,   Method: Compositional matrix adjust.
 Identities = 146/356 (41%), Positives = 213/356 (59%), Gaps = 10/356 (2%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PIN---GDFFAYTRHEP 105
           ++LE+LD+GK    S + D++       YYAG A+ +  + + P+N     + +Y   EP
Sbjct: 106 ATLESLDSGKTLYES-AADMDDVAGCFEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREP 164
Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           +GV G I PWN+PLLM  WK+APALA G   +LKP+E   +T L +G +  E G+P G +
Sbjct: 165 LGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGLPSGAL 224
Query: 166 NIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           NI+ G G +AG  L  HP VDK++FTGS   G  +   + A  +K  +LELGGKSP ++F
Sbjct: 225 NILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMT-AAAQLVKPVSLELGGKSPIVVF 283
Query: 225 ADAD-LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDL 283
            D D LD A E   FG+F N GQ C A SR  VQ+ I   F+ R  +  K   + DP + 
Sbjct: 284 DDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEE 343
Query: 284 NVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKI 341
           + + GP +   Q +K+L+FI + KS+GA ++ GG R     KG+YVQPT+  +V   M+I
Sbjct: 344 DCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEI 403
Query: 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            +EE+FGPV  +  F + E+ IE AN++ YGL AAV +KD+ +    T+  + G +
Sbjct: 404 WKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGII 459

>pdb|4I8Q|A Chain A, Structure Of The Aminoaldehyde Dehydrogenase 1 E260a Mutant From Solanum Lycopersicum (slamadh1-e260a) Length = 514

Iteration: 1
 Score =  256 bits (654), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 145/356 (40%), Positives = 212/356 (59%), Gaps = 10/356 (2%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PIN---GDFFAYTRHEP 105
           ++LE+LD+GK    S + D++       YYAG A+ +  + + P+N     + +Y   EP
Sbjct: 106 ATLESLDSGKTLYES-AADMDDVAGCFEYYAGLAEALDSRRMTPVNLNSDSYKSYVLREP 164
Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           +GV G I PWN+PLLM  WK+APALA G   +LKP+E   +T L +G +  E G+P G +
Sbjct: 165 LGVVGLITPWNYPLLMAIWKVAPALAAGCAAILKPSELASITCLELGEICREIGLPSGAL 224
Query: 166 NIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           NI+ G G +AG  L  HP VDK++FTGS   G  +   + A  +K  +L LGGKSP ++F
Sbjct: 225 NILTGLGPEAGGPLASHPHVDKISFTGSGPTGSKIMT-AAAQLVKPVSLALGGKSPIVVF 283
Query: 225 ADAD-LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDL 283
            D D LD A E   FG+F N GQ C A SR  VQ+ I   F+ R  +  K   + DP + 
Sbjct: 284 DDIDNLDIAAEWTLFGIFANTGQVCSATSRLIVQENIASAFMDRLLKWTKNIKISDPLEE 343
Query: 284 NVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKI 341
           + + GP +   Q +K+L+FI + KS+GA ++ GG R     KG+YVQPT+  +V   M+I
Sbjct: 344 DCKLGPVVSAGQYEKVLKFISNAKSEGATILCGGERPQHLKKGYYVQPTIITDVNTSMEI 403
Query: 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            +EE+FGPV  +  F + E+ IE AN++ YGL AAV +KD+ +    T+  + G +
Sbjct: 404 WKEEVFGPVLCVKTFKTEEQAIELANDTKYGLGAAVMSKDVKRCERFTKAFQTGII 459

>pdb|3B4W|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Aldehyde Dehydrogenase Complexed With Nad+ Length = 495

Iteration: 1
 Score =  255 bits (652), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 148/349 (42%), Positives = 201/349 (57%), Gaps = 3/349 (0%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           + L   + G+P  +  ++    S+  + Y+AG ADK+            +    EPVGV 
Sbjct: 91  TKLLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVV 150
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           G I+ WN PL +   KIAPAL  G TIVLKPA +TPLTA A+  + AE G+PEGV+++VP
Sbjct: 151 GAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVP 210
Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G  + G AL  +P +D   FTGS+ VG+ V +   A  LK  TLELGGKS  II  D DL
Sbjct: 211 GGIETGQALTSNPDIDMFTFTGSSAVGREVGR-RAAEMLKPCTLELGGKSAAIILEDVDL 269
Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
            AA+    F    N GQ C   +R     + YDE VA          VG P D   + GP
Sbjct: 270 AAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGP 329
Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIAREEIF 347
            I ++Q  ++  +I  G  +GA+LV GGGR    D GF++QPTVFA+V + M IA+EEIF
Sbjct: 330 LISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIF 389
Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           GPV  +I + + E+ I  AN+S YGLA +V+T D+ K   ++Q +R GT
Sbjct: 390 GPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGT 438

>pdb|3JZ4|A Chain A, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  254 bits (648), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 139/350 (39%), Positives = 205/350 (58%), Gaps = 4/350 (1%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108
           + L TL+ GKP   +   ++ Y+   + ++A    +I+G TIP +  D       +P+GV
Sbjct: 90  ARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGV 148
Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
              I PWNFP  M+  K  PALA G T+VLKPA QTP +ALA+  L   AG+P GV N+V
Sbjct: 149 TAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVV 208
Query: 169 PGY-GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA 227
            G  G  G  L  +P V K++FTGSTE+G+ + +   A ++K+ +LELGG +P I+F DA
Sbjct: 209 TGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLME-QCAKDIKKVSLELGGNAPFIVFDDA 267
Query: 228 DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQ 287
           DLD AVEGA    F N GQ C   +R +VQD +YD F  +  +   +  +GD  D  V  
Sbjct: 268 DLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTI 327
Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           GP ID++ + K+ E I     +GA++V GG      G + QPT+  +V  + K+++EE F
Sbjct: 328 GPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETF 387
Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           GP+  L RF    +VI +AN++++GLAA  + +DL +   V + L  G +
Sbjct: 388 GPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIV 437

>pdb|3JZ4|C Chain C, Crystal Structure Of E. Coli Nadp Dependent Enzyme Length = 481

Iteration: 1
 Score =  254 bits (648), Expect = 9e-68,   Method: Compositional matrix adjust.
 Identities = 139/350 (39%), Positives = 205/350 (58%), Gaps = 4/350 (1%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV 108
           + L TL+ GKP   +   ++ Y+   + ++A    +I+G TIP +  D       +P+GV
Sbjct: 90  ARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGV 148
Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
              I PWNFP  M+  K  PALA G T+VLKPA QTP +ALA+  L   AG+P GV N+V
Sbjct: 149 TAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVV 208
Query: 169 PGY-GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA 227
            G  G  G  L  +P V K++FTGSTE+G+ + +   A ++K+ +LELGG +P I+F DA
Sbjct: 209 TGSAGAVGNELTSNPLVRKLSFTGSTEIGRQLME-QCAKDIKKVSLELGGNAPFIVFDDA 267
Query: 228 DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQ 287
           DLD AVEGA    F N GQ C   +R +VQD +YD F  +  +   +  +GD  D  V  
Sbjct: 268 DLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTI 327
Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           GP ID++ + K+ E I     +GA++V GG      G + QPT+  +V  + K+++EE F
Sbjct: 328 GPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETF 387
Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           GP+  L RF    +VI +AN++++GLAA  + +DL +   V + L  G +
Sbjct: 388 GPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIV 437

>pdb|3IFG|A Chain A, Crystal Structure Of Succinate-Semialdehyde Dehydrogenase From Burkholderia Pseudomallei, Part 1 Of 2 Length = 484

Iteration: 1
 Score =  245 bits (625), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 134/346 (38%), Positives = 203/346 (58%), Gaps = 4/346 (1%)
Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCGQI 112
           T + GKP   +   ++ Y+   + ++A    ++ G T+P  + +       EP+GVC  I
Sbjct: 97  TTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAI 155
Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
            PWNFP  M+A K+ PALA G  IV+KPAE TP +ALA+  L   AG+P+GV+++V G  
Sbjct: 156 TPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDP 215
Query: 173 DA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
            A G  +  +P V K++FTGST VG+L+   S A  +K+ TLELGG +P I+F DADLDA
Sbjct: 216 KAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS-APTVKKLTLELGGNAPFIVFDDADLDA 274
Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           AVEGA    + N GQ C   +R FV + +YD F  +      +  VG   +     GP I
Sbjct: 275 AVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLI 334
Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQ 351
           ++  + K+   I    ++GA L+ GG R      + +PTV   V+ DM +A+EE FGP+ 
Sbjct: 335 NEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLA 394
Query: 352 QLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            L RF+S EE++  AN++++GLAA ++++D+ +   V + L  G +
Sbjct: 395 PLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMV 440

>pdb|1WNB|A Chain A, Escherichia Coli Ydcw Gene Product Is A Medium-Chain Aldehyde Dehydrogenase (Complexed With Nadh And Betaine Aldehyde) Length = 495

Iteration: 1
 Score =  241 bits (616), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 141/377 (37%), Positives = 216/377 (57%), Gaps = 15/377 (3%)
Query: 30  TKPKIEHTQLFINNEFV--NAQ--SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADK 85
           T PK+    L    + +  N Q  + LE+ + GKP + +++ ++   +   R++AG A  
Sbjct: 79  TTPKVRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARC 138
Query: 86  IHGKTIPINGDFF----AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPA 141
           ++G      G++     +  R +P+GV   I PWN+PL+M AWK+APALA GN +VLKP+
Sbjct: 139 LNGLAA---GEYLEGHTSMIRRDPLGVVASIAPWNYPLMMAAWKLAPALAAGNCVVLKPS 195
Query: 142 EQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAFTGSTEVGKLVQ 200
           E TPLTAL +  L A+   P GVVNI+ G G   G  L  HP V  V+ TGS   G+ + 
Sbjct: 196 EITPLTALKLAEL-AKDIFPAGVVNILFGRGKTVGDPLTGHPKVRMVSLTGSIATGEHII 254
Query: 201 QGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTI 260
             + AS++KRT +ELGGK+P I+F DAD++A VEG     ++N GQ C A  R + Q  I
Sbjct: 255 SHT-ASSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGI 313
Query: 261 YDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGA-QLVAGGGR 319
           YD  V + G        G P D + E GP      ++++ + +E  K+ G  +++ GG +
Sbjct: 314 YDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEK 373
Query: 320 AGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFT 379
               G+Y  PT+ A    D  I ++E+FGPV  +  F + E+V+  AN+S YGLA++V+T
Sbjct: 374 RKGNGYYYAPTLLAGALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWT 433
Query: 380 KDLDKTNYVTQGLRAGT 396
           KD+ + + V+  L+ G 
Sbjct: 434 KDVGRAHRVSARLQYGC 450

>pdb|3U4J|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Sinorhizobium Meliloti Length = 528

Iteration: 1
 Score =  241 bits (616), Expect = 4e-64,   Method: Compositional matrix adjust.
 Identities = 143/347 (41%), Positives = 208/347 (59%), Gaps = 5/347 (1%)
Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGVCG 110
           +E+L+ GKP   +   ++ +      Y AG A  + G+T   I  D       EPVGV G
Sbjct: 108 IESLEVGKPIAQARG-EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVVG 166
Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
            I PWNFP ++ + ++  A+ +G T+VLKP+E T  T++ +  L  EAGIP+GV N+V G
Sbjct: 167 IITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTG 226
Query: 171 YGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           YGD AG  L + P VD VAFTGS  VG  + +   A  +KR  LELGGK P I+FADADL
Sbjct: 227 YGDPAGQVLAEDPNVDXVAFTGSVRVGTKLGE-IAARTVKRVGLELGGKGPQIVFADADL 285
Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           DAA +G  +G++ N GQCC +GSR  VQ+ I D    R  + +++   GDP +   + G 
Sbjct: 286 DAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALXERLLDISRKVAFGDPLNERTKIGA 345
Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIAREEIFG 348
            I +   +K+  ++ +G + GA+L+ GG R G + G Y  PTVFA V  D  IAREEIFG
Sbjct: 346 XISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDXSIAREEIFG 405
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           PV   + F + +E +  AN +++GL+A+V++ +L+      + +RAG
Sbjct: 406 PVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAG 452

>pdb|3I44|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Bartonella Henselae At 2.0a Resolution Length = 497

Iteration: 1
 Score =  241 bits (614), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 130/348 (37%), Positives = 204/348 (58%), Gaps = 6/348 (1%)
Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQII 113
           +++ G P +M+ +         +R +     +   +   I G+  A   ++ +GV G I 
Sbjct: 110 SMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGLIT 169
Query: 114 PWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG- 172
           PWN+P+  +  K+ PAL  G T+VLKP+E  PL+A+    ++ EA +P GV N++ G G 
Sbjct: 170 PWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGA 229
Query: 173 DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAA 232
           + G+ L  HP ++ ++FTGST  GK + + + ++ LKR  LELGGK  NIIFADAD+DA 
Sbjct: 230 NVGSYLSAHPDLEMISFTGSTRAGKDISK-NASNTLKRVCLELGGKGANIIFADADIDAL 288
Query: 233 VEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQID 292
             G     F+N GQ C A +R  V+  IYD+ +  + + A++  VG         GP + 
Sbjct: 289 QRGVRH-CFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVS 347
Query: 293 KEQMDKILEFIESGKSQGAQLVAGGG---RAGDKGFYVQPTVFANVRDDMKIAREEIFGP 349
           KEQ DKI + I+SG  +GA LV GG       ++G+YV+PTVFA+V+  M+I REEIFGP
Sbjct: 348 KEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIFGP 407
Query: 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           V  L+ F++ +E +  AN+++YGL   + ++D  K   +   +R+G +
Sbjct: 408 VLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMV 455

>pdb|3EK1|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Brucella Melitensis Biovar Abortus 2308 Length = 504

Iteration: 1
 Score =  233 bits (595), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 143/347 (41%), Positives = 209/347 (60%), Gaps = 8/347 (2%)
Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI--NGDFFAYTRHEPVGVCGQ 111
           T + GKP   +   +V Y+   + ++A  A +++G TIP   NG      R +PVGV   
Sbjct: 117 TSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIR-QPVGVTAA 174
Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I PWNFP  M+  K APALA G T++++PA+ TPLTALA+G L  +AGIP GV+ IV G 
Sbjct: 175 ITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGK 234
Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
             + GA L  +  V K++FTGSTEVG+L+     A  +KR +LELGG +P I+F DADLD
Sbjct: 235 AREIGAELTSNDTVRKLSFTGSTEVGRLL-MAQCAPTIKRISLELGGNAPFIVFDDADLD 293
Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
           AAV+GA    + N GQ C   +R +VQ  +YD+F  +   + K   VG+  +  V  GP 
Sbjct: 294 AAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPM 353
Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPV 350
           I+++ + K+   IE   S+GA+L+ GG   G  G + +P +   V  DM +A+EE FGP+
Sbjct: 354 IEEKAITKVKAHIEDAVSKGAKLITGGKELG--GLFFEPGILTGVTSDMLVAKEETFGPL 411
Query: 351 QQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             L  F + EEVI +AN++ +GLAA  +T++  +   V++ L  G +
Sbjct: 412 APLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMV 458

>pdb|2OPX|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From Escherichia Coli Length = 479

Iteration: 1
 Score =  230 bits (586), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 129/351 (36%), Positives = 201/351 (57%), Gaps = 9/351 (2%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN---GDFFAYTRHEPV 106
           S+L   + GK   ++  V+V ++   + Y A +A +  G+ I  +    +   + R   +
Sbjct: 87  SALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKR--AL 143
Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVN 166
           GV   I+PWNFP  ++A K+APAL TGNTIV+KP+E TP  A+A   ++ E G+P GV N
Sbjct: 144 GVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFN 203
Query: 167 IVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
           +V G G+  G  L  +P V  V+ TGS   G+ +   + A N+ +  LELGGK+P I+  
Sbjct: 204 LVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKNITKVCLELGGKAPAIVMD 262
Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN- 284
           DADL+ AV+        N GQ C    R +VQ  IYD+FV R GE  +    G+P + N 
Sbjct: 263 DADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERND 322
Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
           +  GP I+   ++++ + +     +GA++  GG     KG+Y  PT+  +VR +M I  E
Sbjct: 323 IAMGPLINAAALERVEQKVARAVEEGARVALGGKAVEGKGYYYPPTLLLDVRQEMSIMHE 382
Query: 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           E FGPV  ++ F ++EE I  AN+SDYGL ++++T++L+      +GL+ G
Sbjct: 383 ETFGPVLPVVAFDTLEEAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG 433

>pdb|3RJL|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Licheniformis (Target Nysgrc-000337) Length = 538

Iteration: 1
 Score =  229 bits (583), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 133/359 (37%), Positives = 200/359 (55%), Gaps = 17/359 (4%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPING-----DFFAYTRHE 104
           S+L   + GKP+N +   D   ++  + YYA    ++  K  P+N      + + YT   
Sbjct: 117 SALLVKEAGKPWNEA-DADTAEAIDFMEYYARQMIEL-AKGKPVNSREGERNQYVYT--- 171
Query: 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGV 164
           P GV   I PWNF   ++A      + TGNT+VLKPA   P+ A     ++ E+G+P+GV
Sbjct: 172 PTGVTVVIPPWNFLFAIMAGTTVAPIVTGNTVVLKPASAAPVIAAKFVEVLEESGLPKGV 231
Query: 165 VNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGS-----GASNLKRTTLELGGK 218
           VN VPG G + G  LV HP    + FTGS EVG  + + +     G ++LK+   E+GGK
Sbjct: 232 VNFVPGSGAEVGDYLVDHPKTSIITFTGSREVGTRIFERAAKVQPGQTHLKQVIAEMGGK 291
Query: 219 SPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVG 278
              ++  D D++ A +      F   GQ C AGSR  V + +YDE + R  E  + + VG
Sbjct: 292 DTVVVDEDCDIELAAQSIFTSAFGFAGQKCSAGSRAVVHEKVYDEVLKRVIEITESKKVG 351
Query: 279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDD 338
           +P   +V  GP ID+   +KI+++IE GK +G +LV+GG     KG++++PT+FA++   
Sbjct: 352 EPDSADVYMGPVIDQASFNKIMDYIEIGKEEG-RLVSGGKGDDSKGYFIEPTIFADLDPK 410
Query: 339 MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            ++ +EEIFGPV    + SS +E +E ANN++YGL  AV TK+ D  N   Q    G L
Sbjct: 411 ARLMQEEIFGPVVAFSKVSSFDEALEVANNTEYGLTGAVITKNRDHINRAKQEFHVGNL 469

>pdb|2IMP|A Chain A, Crystal Structure Of Lactaldehyde Dehydrogenase From E. Coli: The Ternary Complex With Product Bound (L)-Lactate And Nadh. Length = 479

Iteration: 1
 Score =  228 bits (580), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 128/351 (36%), Positives = 201/351 (57%), Gaps = 9/351 (2%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN---GDFFAYTRHEPV 106
           S+L   + GK   ++  V+V ++   + Y A +A +  G+ I  +    +   + R   +
Sbjct: 87  SALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKR--AL 143
Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVN 166
           GV   I+PWNFP  ++A K+APAL TGNTIV+KP+E TP  A+A   ++ E G+P GV N
Sbjct: 144 GVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFN 203
Query: 167 IVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
           +V G G+  G  L  +P V  V+ TGS   G+ +   + A N+ +  LELGGK+P I+  
Sbjct: 204 LVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKNITKVXLELGGKAPAIVMD 262
Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN- 284
           DADL+ AV+        N GQ C    R +VQ  IYD+FV R GE  +    G+P + N 
Sbjct: 263 DADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERND 322
Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
           +  GP I+   ++++ + +     +GA++  GG     KG+Y  PT+  +VR +M I  E
Sbjct: 323 IAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHE 382
Query: 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           E FGPV  ++ F ++E+ I  AN+SDYGL ++++T++L+      +GL+ G
Sbjct: 383 ETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG 433

>pdb|2HG2|A Chain A, Structure Of Lactaldehyde Dehydrogenase Length = 479

Iteration: 1
 Score =  228 bits (580), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 128/351 (36%), Positives = 201/351 (57%), Gaps = 9/351 (2%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN---GDFFAYTRHEPV 106
           S+L   + GK   ++  V+V ++   + Y A +A +  G+ I  +    +   + R   +
Sbjct: 87  SALIVEEGGKIQQLA-EVEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKR--AL 143
Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVN 166
           GV   I+PWNFP  ++A K+APAL TGNTIV+KP+E TP  A+A   ++ E G+P GV N
Sbjct: 144 GVTTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFN 203
Query: 167 IVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
           +V G G+  G  L  +P V  V+ TGS   G+ +   + A N+ +  LELGGK+P I+  
Sbjct: 204 LVLGRGETVGQELAGNPKVAMVSMTGSVSAGEKIM-ATAAKNITKVCLELGGKAPAIVMD 262
Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN- 284
           DADL+ AV+        N GQ C    R +VQ  IYD+FV R GE  +    G+P + N 
Sbjct: 263 DADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERND 322
Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
           +  GP I+   ++++ + +     +GA++  GG     KG+Y  PT+  +VR +M I  E
Sbjct: 323 IAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHE 382
Query: 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           E FGPV  ++ F ++E+ I  AN+SDYGL ++++T++L+      +GL+ G
Sbjct: 383 ETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG 433

>pdb|3K2W|A Chain A, Crystal Structure Of Betaine-Aldehyde Dehydrogenase From Pseudoalteromonas Atlantica T6c Length = 497

Iteration: 1
 Score =  226 bits (577), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/335 (37%), Positives = 182/335 (54%), Gaps = 7/335 (2%)
Query: 67  VDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWK 125
           ++V+ +   + Y    A  I G  +P  N D   Y    P GV   I  WNFPL +   K
Sbjct: 109 MEVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGITAWNFPLALAGRK 168
Query: 126 IAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGV 184
           I PAL TGNT+VLKP ++TPL    +G +  EAG+P+GV+N++ G G   G  L + P  
Sbjct: 169 IGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPIT 228
Query: 185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNM 244
             +  TGST  GK + + S A  +    LELGGK+P ++  DADLD A E A +G F N 
Sbjct: 229 KMITMTGSTVAGKQIYKTS-AEYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANC 287
Query: 245 GQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIE 304
           GQ C    R +V  ++YDEF+A+     K   VGDP D + + GP+ ++ ++D I   + 
Sbjct: 288 GQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVH 347
Query: 305 SGKSQGAQLVAGGGRAGDKGF----YVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIE 360
               QGA +  GG  A  +GF    + +PTV  +V+ D  +  EE FGP+  +++ SS+E
Sbjct: 348 EAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETFGPILPIVKVSSME 407
Query: 361 EVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           + IE  N+S YGL+A V T+     N     L  G
Sbjct: 408 QAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVG 442

>pdb|3TY7|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase Family Protein From Staphylococcus Aureus Length = 478

Iteration: 1
 Score =  218 bits (556), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 117/298 (39%), Positives = 177/298 (59%), Gaps = 5/298 (1%)
Query: 104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEG 163
           E +GV G I PWNFP    + K+A A A G+ +VLKP+E+TP  A+ +  +  + G+P+G
Sbjct: 138 EAIGVSGLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKG 197
Query: 164 VVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNI 222
           V N+V G G   G  L +HP V   +FTGS   G  + +   A + K+ +LELGGKSP I
Sbjct: 198 VFNLVNGDGAGVGNPLSEHPKVRXXSFTGSGPTGSKIXE-KAAKDFKKVSLELGGKSPYI 256
Query: 223 IFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFD 282
           +  D D+  A +     +  N GQ C AG+R  V + I D F+A   E+  +  VG+P +
Sbjct: 257 VLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPRE 316
Query: 283 LNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGG-GRAG--DKGFYVQPTVFANVRDDM 339
              + GP I K+Q D++  +I  G  +GA+L  GG G+    +KG++ +PT+F NV +  
Sbjct: 317 DGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQX 376
Query: 340 KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            IA+EEIFGPV  +I ++ ++E I+ AN++ YGLA  V  KD +  + V + + AGT+
Sbjct: 377 TIAQEEIFGPVXSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTV 434

>pdb|3QAN|A Chain A, Crystal Structure Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Bacillus Halodurans Length = 538

Iteration: 1
 Score =  218 bits (554), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 133/351 (37%), Positives = 199/351 (56%), Gaps = 17/351 (4%)
Query: 58  GKPYNMSYSVDVEYSLRTLRYYAGFADKIH-GKTI---PINGDFFAYTRHEPVGVCGQII 113
           GKP+  +   D   ++  L YYA    +++ GK I   P   + + YT   P+GV   I 
Sbjct: 125 GKPWKEA-DADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYT---PMGVTVTIS 180
Query: 114 PWNFPL-LMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
           PWNF L +M+   +AP + TGNT+VLKPA  TP+ A     ++ +AG+P+GV+N VPG G
Sbjct: 181 PWNFALAIMVGTAVAP-IVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSG 239
Query: 173 -DAGAALVQHPGVDKVAFTGSTEVG-KLVQQGS----GASNLKRTTLELGGKSPNIIFAD 226
            + G  LV HP    + FTGS +VG +L ++ +    G ++LKR  +E+GGK   ++  D
Sbjct: 240 AEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVVVDRD 299
Query: 227 ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVE 286
           ADLD A E      F   GQ C AGSR  +   +YDE + ++   AK  TVGDP + +  
Sbjct: 300 ADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNY 359
Query: 287 QGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI 346
            GP ID++  +KI+ +IE GK +G +L+ GG      GF++QPT+ A++  +  I +EEI
Sbjct: 360 MGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIMQEEI 418
Query: 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           FGPV    + +  +  +E ANN++YGL  AV T++        +    G L
Sbjct: 419 FGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNL 469

>pdb|3PQA|A Chain A, Crystal Structure Of Glyceraldehyde-3-Phosphate Dehydrogenase Gapn From Methanocaldococcus Jannaschii Dsm 2661 Length = 486

Iteration: 1
 Score =  216 bits (551), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/355 (36%), Positives = 204/355 (57%), Gaps = 16/355 (4%)
Query: 55  LDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIP 114
           +D GKP   +  V+VE S+ T +  A +  +   + IP + D   +TR EPVG+ G I P
Sbjct: 82  IDAGKPIKQA-RVEVERSIGTFKLAAFYVKEHRDEVIP-SDDRLIFTRREPVGIVGAITP 139
Query: 115 WNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVVNIVPG 170
           +NFPL + A KIAPA+ATGN IV  P+ + PL  + +  +I  A     +P GV N++ G
Sbjct: 140 FNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTG 199
Query: 171 YGDA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
            G+  G  +V +  V+ ++FTGS++VG+L+ + +G    K+  LELGG +PNI+  DADL
Sbjct: 200 AGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADL 256
Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           + AV     G F   GQ C +     V ++I D+F+     +AK   VG+P D   + GP
Sbjct: 257 NKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGP 316
Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP 349
            I  E  + + + +E    +G +L+ GG R  DK  +  PT+    RD++ + + E F P
Sbjct: 317 LISVEHAEWVEKVVEKAIDEGGKLLLGGKR--DKALF-YPTILEVDRDNI-LCKTETFAP 372
Query: 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR-AGTLIRFSSI 403
           V  +IR +  EE+I+ AN+++YGL +A+FT D++K+    + L   G +I  SS+
Sbjct: 373 VIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSL 426

>pdb|2W8N|A Chain A, The Crytal Structure Of The Oxidized Form Of Human Ssadh Length = 487

Iteration: 1
 Score =  213 bits (543), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 129/350 (36%), Positives = 198/350 (56%), Gaps = 8/350 (2%)
Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPING-DFFAYTRHEPVGVCGQI 112
           T ++GKP   ++  ++ YS   L +++  A +++G  I     D  A    +P+GV   I
Sbjct: 95  TAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVI 153
Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP--- 169
            PWNFP  M+  K+  ALA G T+V+KPAE TP +ALA+  L ++AGIP GV N++P   
Sbjct: 154 TPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSR 213
Query: 170 -GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
               + G A+   P V K++FTGST  GK++     A+++KR ++ELGG +P I+F  A+
Sbjct: 214 KNAKEVGEAICTDPLVSKISFTGSTTTGKILLH-HAANSVKRVSMELGGLAPFIVFDSAN 272
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRT-VGDPFDLNVEQ 287
           +D AV GA    F N GQ C   ++  VQ  I+D FV    E  K+   VG+ F+    Q
Sbjct: 273 VDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQ 332
Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           GP I+++ ++K+ + +    S+GA +V GG R      + +PT+  NV  DM    EE F
Sbjct: 333 GPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETF 392
Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           GP+  +I+F + EE I  AN +D GLA   +++D  +   V + L  G +
Sbjct: 393 GPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMV 442

>pdb|2W8P|A Chain A, The Crystal Structure Of Human C340a Ssadh Length = 487

Iteration: 1
 Score =  209 bits (532), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/350 (36%), Positives = 197/350 (56%), Gaps = 8/350 (2%)
Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPING-DFFAYTRHEPVGVCGQI 112
           T ++GKP   ++  ++ YS   L +++  A +++G  I     D  A    +P+GV   I
Sbjct: 95  TAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVI 153
Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP--- 169
            PWNFP  M+  K+  ALA G T+V+KPAE TP +ALA+  L ++AGIP GV N++P   
Sbjct: 154 TPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSR 213
Query: 170 -GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
               + G A+   P V K++FTGST  GK++     A+++KR ++ELGG +P I+F  A+
Sbjct: 214 KNAKEVGEAICTDPLVSKISFTGSTTTGKILLH-HAANSVKRVSMELGGLAPFIVFDSAN 272
Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRR-TVGDPFDLNVEQ 287
           +D AV GA    F N GQ     ++  VQ  I+D FV    E  K+   VG+ F+    Q
Sbjct: 273 VDQAVAGAMASKFRNTGQTAVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQ 332
Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           GP I+++ ++K+ + +    S+GA +V GG R      + +PT+  NV  DM    EE F
Sbjct: 333 GPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETF 392
Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           GP+  +I+F + EE I  AN +D GLA   +++D  +   V + L  G +
Sbjct: 393 GPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMV 442

>pdb|1T90|A Chain A, Crystal Structure Of Methylmalonate Semialdehyde Dehydrogenase From Bacillus Subtilis Length = 486

Iteration: 1
 Score =  207 bits (526), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/384 (32%), Positives = 205/384 (53%), Gaps = 7/384 (1%)
Query: 16  SLKNYSAAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRT 75
           + K +S  AVP+   + +I      + ++     + L T++NGK    +   +V   +  
Sbjct: 55  AFKTWSKVAVPR---RARILFNFQQLLSQHKEELAHLITIENGKNTKEALG-EVGRGIEN 110
Query: 76  LRYYAGFADKIHGKTI-PINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGN 134
           + + AG    + G ++  I  D  A     P+GV G I P+NFP+++  W    A+A GN
Sbjct: 111 VEFAAGAPSLMMGDSLASIATDVEAANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGN 170
Query: 135 TIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTE 194
           T +LKP+E+TPL    +  L  +AG+P+GV N+V G  D    +++HP +  ++F GS  
Sbjct: 171 TFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKP 230
Query: 195 VGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRT 254
           VG+ V +  G+ NLKR     G K+  I+  DA+L+  V       F + G+ C A +  
Sbjct: 231 VGEYVYK-KGSENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVV 289
Query: 255 FVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLV 314
            V++ I DEF+A+  E+     +G+  D  V  GP I ++   + L +IE G  +GA+LV
Sbjct: 290 TVEEGIADEFMAKLQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLV 349
Query: 315 AGGGR-AGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGL 373
             G     D G++V PT+F NV  +M I ++EIF PV  +IR  +++E IE AN S++  
Sbjct: 350 CDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFAN 409
Query: 374 AAAVFTKDLDKTNYVTQGLRAGTL 397
            A +FT + +   Y  + + AG L
Sbjct: 410 GACLFTSNSNAIRYFRENIDAGML 433

>pdb|1UZB|A Chain A, 1-pyrroline-5-carboxylate Dehydrogenase Length = 516

Iteration: 1
 Score =  203 bits (516), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/345 (35%), Positives = 181/345 (52%), Gaps = 20/345 (5%)
Query: 66  SVDVEYSLRTLRYYAGFADKIHGKTIPI-------NGDFFAYTRHEPVGVCGQIIPWNFP 118
           S DV  ++  + YYA  A +     + +       N  F+      P+G    I PWNFP
Sbjct: 132 SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYV-----PLGAGVVIAPWNFP 186
Query: 119 LLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGD-AGAA 177
           + +    I   +A GNT++ KPAE   +    V  +  EAG P GVVN +PG G+  GA 
Sbjct: 187 VAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAY 246
Query: 178 LVQHPGVDKVAFTGSTEVGKLVQQGSG-----ASNLKRTTLELGGKSPNIIFADADLDAA 232
           LV+HP +  + FTGS EVG  + + +G      +  KR  +E GGK+  I+   AD D A
Sbjct: 247 LVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLA 306
Query: 233 VEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQID 292
            EG     +   GQ C A SR  +    Y+  + R  +RA+R +VG P + N + GP + 
Sbjct: 307 AEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVS 365
Query: 293 KEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQ 352
            EQ  K+L +IE GK++G QLV GG R   +G+++ PTVF  V    +IA+EEIFGPV  
Sbjct: 366 AEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLS 424
Query: 353 LIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           +IR     E +E AN++ YGL   V+++  +   +  +    G L
Sbjct: 425 VIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469

>pdb|3PRL|A Chain A, Crystal Structure Of Nadp-Dependent Glyceraldehyde-3-Phosphate Dehydrogenase From Bacillus Halodurans C-125 Length = 505

Iteration: 1
 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/339 (38%), Positives = 187/339 (55%), Gaps = 18/339 (5%)
Query: 68  DVEYSLRTLRYYAGFADKIHGKTIPINGDFF--------AYTRHEPVGVCGQIIPWNFPL 119
           +V  +   +R+ A  A +++G+T+   GD F        A    EP+GV   I P+N+P+
Sbjct: 109 EVSRTADIIRHTADEALRLNGETL--KGDQFKGGSSKKIALVEREPLGVVLAISPFNYPV 166
Query: 120 LMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAAL 178
            + A KIAPAL TGNT+V KPA Q  L+ + +   +A+AG PEG++ +V G G   G  L
Sbjct: 167 NLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHL 226
Query: 179 VQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHF 238
           V+HPG+D + FTG T  G+ +   S  + +    LELGGK P I+  DADL         
Sbjct: 227 VEHPGIDMITFTGGTTTGERI---SEKAKMIPVVLELGGKDPAIVLDDADLKLTASQIVS 283
Query: 239 GLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDK 298
           G F   GQ C A  R FVQD++ D+ VA   E  ++ TVG P D + +  P ID++    
Sbjct: 284 GAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPED-DADITPVIDEKSAAF 342
Query: 299 ILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSS 358
           I   I+     GA L++G  R G+    + PT+  +V   M++A EE FGPV  +IR   
Sbjct: 343 IQGLIDDALENGATLLSGNKRQGN---LLSPTLLDDVTPAMRVAWEEPFGPVLPIIRVKD 399
Query: 359 IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
             E I  +N SDYGL A++FTKD D+   + + L  GT+
Sbjct: 400 ANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTV 438

>pdb|2BHP|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nad. Length = 516

Iteration: 1
 Score =  202 bits (515), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/345 (35%), Positives = 180/345 (52%), Gaps = 20/345 (5%)
Query: 66  SVDVEYSLRTLRYYAGFADKIHGKTIPI-------NGDFFAYTRHEPVGVCGQIIPWNFP 118
           S DV  ++  + YYA  A +     + +       N  F+      P+G    I PWNFP
Sbjct: 132 SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYV-----PLGAGVVIAPWNFP 186
Query: 119 LLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGD-AGAA 177
           + +    I   +A GNT++ KPAE   +    V  +  EAG P GVVN +PG G+  GA 
Sbjct: 187 VAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAY 246
Query: 178 LVQHPGVDKVAFTGSTEVGKLVQQGSG-----ASNLKRTTLELGGKSPNIIFADADLDAA 232
           LV+HP +  + FTGS EVG  + + +G      +  KR  +E GGK   I+   AD D A
Sbjct: 247 LVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLA 306
Query: 233 VEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQID 292
            EG     +   GQ C A SR  +    Y+  + R  +RA+R +VG P + N + GP + 
Sbjct: 307 AEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVS 365
Query: 293 KEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQ 352
            EQ  K+L +IE GK++G QLV GG R   +G+++ PTVF  V    +IA+EEIFGPV  
Sbjct: 366 AEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLS 424
Query: 353 LIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           +IR     E +E AN++ YGL   V+++  +   +  +    G L
Sbjct: 425 VIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469

>pdb|4DNG|A Chain A, Crystal Structure Of Putative Aldehyde Dehydrogenase From Bacillus Subtilis Subsp. Subtilis Str. 168 Length = 485

Iteration: 1
 Score =  200 bits (508), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 113/285 (39%), Positives = 172/285 (60%), Gaps = 12/285 (4%)
Query: 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GI 160
           P+GV   I P+NFP+ +    IAPA+A GN++V KP  QT   A++ G +IA+A    G+
Sbjct: 143 PLGVISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQT---AISGGTIIAKAFEHAGL 199
Query: 161 PEGVVNIV-PGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKS 219
           P GV+N++     + G  ++ +P    ++FTGST VG+ + + +G +  KR  LELGG +
Sbjct: 200 PAGVLNVMLTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIAGRA-FKRMALELGGNN 258
Query: 220 PNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGD 279
           P  + +DAD+D AV+ A FG F + GQ C   +R  V   +YDEFV +   R K+   GD
Sbjct: 259 PFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGD 318
Query: 280 PFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDM 339
             D     GP I++ Q++K LE IE  K+ G +L   G R G+    + P VF    ++ 
Sbjct: 319 QTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGN---VLTPYVFVGADNNS 375
Query: 340 KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDK 384
           KIA+ E+F P+  +I+  S +E I+ AN+++YGL++AVFT DL+K
Sbjct: 376 KIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEK 420

>pdb|2BJA|A Chain A, Crystal Analysis Of 1-Pyrroline-5-Carboxylate Dehydrogenase From Thermus With Bound Nadh Length = 516

Iteration: 1
 Score =  198 bits (503), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 123/345 (35%), Positives = 179/345 (51%), Gaps = 20/345 (5%)
Query: 66  SVDVEYSLRTLRYYAGFADKIHGKTIPI-------NGDFFAYTRHEPVGVCGQIIPWNFP 118
           S DV  ++  + YYA  A +     + +       N  F+      P+G    I PWNFP
Sbjct: 132 SADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYV-----PLGAGVVIAPWNFP 186
Query: 119 LLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGD-AGAA 177
           + +    I   +A GNT++ KPAE   +    V  +  EAG P GVVN +PG G+  GA 
Sbjct: 187 VAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAY 246
Query: 178 LVQHPGVDKVAFTGSTEVGKLVQQGSG-----ASNLKRTTLELGGKSPNIIFADADLDAA 232
           LV+HP +  + FTGS EVG  + + +G      +  KR  +E GGK   I+   AD D A
Sbjct: 247 LVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKDAIIVDETADFDLA 306
Query: 233 VEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQID 292
            EG     +   GQ   A SR  +    Y+  + R  +RA+R +VG P + N + GP + 
Sbjct: 307 AEGVVVSAYGFQGQKXSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEENPDLGPVVS 365
Query: 293 KEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQ 352
            EQ  K+L +IE GK++G QLV GG R   +G+++ PTVF  V    +IA+EEIFGPV  
Sbjct: 366 AEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARIAQEEIFGPVLS 424
Query: 353 LIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           +IR     E +E AN++ YGL   V+++  +   +  +    G L
Sbjct: 425 VIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469

>pdb|1EUH|A Chain A, Apo Form Of A Nadp Dependent Aldehyde Dehydrogenase From Streptococcus Mutans Length = 475

Iteration: 1
 Score =  191 bits (485), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 111/301 (36%), Positives = 165/301 (54%), Gaps = 8/301 (2%)
Query: 98  FAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE 157
            A  R EPVG+   I P+N+P+ +   KIAPAL  GN I  KP  Q  ++ L +    AE
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 158 AGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELG 216
           AG+P GV N + G G + G  +V+H  V+ + FTGST +G+ + + +G   ++   LELG
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELG 252
Query: 217 GKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRT 276
           GK   I+  DADL+   +    G F   GQ C A  R  V +++ DE V +  E+    T
Sbjct: 253 GKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT 312
Query: 277 VGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVR 336
           +G+P D + +  P ID +  D +   I     +GA  +    R G+    + P +F  V 
Sbjct: 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGN---LICPILFDKVT 368
Query: 337 DDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
            DM++A EE FGPV  +IR +S+EE IE +N S+YGL A++FT D  +   + + L  GT
Sbjct: 369 TDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGT 428
Query: 397 L 397
           +
Sbjct: 429 V 429

>pdb|2ID2|A Chain A, Gapn T244s Mutant X-Ray Structure At 2.5 A Length = 475

Iteration: 1
 Score =  189 bits (481), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/301 (36%), Positives = 165/301 (54%), Gaps = 8/301 (2%)
Query: 98  FAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE 157
            A  R EPVG+   I P+N+P+ +   KIAPAL  GN I  KP  Q  ++ L +    AE
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 158 AGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELG 216
           AG+P GV N + G G + G  +V+H  V+ + F+GST +G+ + + +G   ++   LELG
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFSGSTGIGERIGKMAG---MRPIMLELG 252
Query: 217 GKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRT 276
           GK   I+  DADL+   +    G F   GQ C A  R  V +++ DE V +  E+    T
Sbjct: 253 GKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT 312
Query: 277 VGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVR 336
           +G+P D + +  P ID +  D +   I     +GA  +    R G+    + P +F  V 
Sbjct: 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGN---LICPILFDKVT 368
Query: 337 DDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
            DM++A EE FGPV  +IR +S+EE IE +N S+YGL A++FT D  +   + + L  GT
Sbjct: 369 TDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGT 428
Query: 397 L 397
           +
Sbjct: 429 V 429

>pdb|2ESD|A Chain A, Crystal Structure Of Thioacylenzyme Intermediate Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  188 bits (477), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 110/301 (36%), Positives = 164/301 (54%), Gaps = 8/301 (2%)
Query: 98  FAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE 157
            A  R EPVG+   I P+N+P+ +   KIAPAL  GN I  KP  Q  ++ L +    AE
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 158 AGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELG 216
           AG+P GV N + G G + G  +V+H  V+ + FTGST +G+ + + +G   ++   L LG
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLALG 252
Query: 217 GKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRT 276
           GK   I+  DADL+   +    G F   GQ C A  R  V +++ DE V +  E+    T
Sbjct: 253 GKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALT 312
Query: 277 VGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVR 336
           +G+P D + +  P ID +  D +   I     +GA  +    R G+    + P +F  V 
Sbjct: 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGN---LICPILFDKVT 368
Query: 337 DDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
            DM++A EE FGPV  +IR +S+EE IE +N S+YGL A++FT D  +   + + L  GT
Sbjct: 369 TDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGT 428
Query: 397 L 397
           +
Sbjct: 429 V 429

>pdb|3RH9|A Chain A, The Crystal Structure Of Oxidoreductase From Marinobacter Aquaeolei Length = 506

Iteration: 1
 Score =  187 bits (475), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/344 (37%), Positives = 192/344 (55%), Gaps = 7/344 (2%)
Query: 56  DNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRH-EPVGVCGQIIP 114
           ++GKP+  +   +V+Y+     Y A     +   TIP       +T H  PVGV G I+P
Sbjct: 98  EHGKPWKEAQG-EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLIVP 156
Query: 115 WNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA 174
           WNFP+  +A K++ ALA G   V+KPA +TPLT +A  ++  +  +P+G VN+V G    
Sbjct: 157 WNFPIGXIAKKLSAALAAGCPSVIKPASETPLTXIAFFSVXDKLDLPDGXVNLVXGKASV 216
Query: 175 -GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAV 233
            G  L +H  V  ++FTGSTEVG+ +   + A  +K+  LELGG +P I+F DADL+AA 
Sbjct: 217 IGKVLCEHKDVPXLSFTGSTEVGRKLIVDT-AEQVKKLALELGGNAPFIVFDDADLEAAA 275
Query: 234 EGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDK 293
           +      F   GQ C   +R FV + + D F  +  ER  + TVGD  +  ++ GP I+K
Sbjct: 276 DNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKXTVGDGXNDGIDIGPLINK 335
Query: 294 EQMDKILEFIESGKSQGAQLVAGGGRA--GDKGFYVQPTVFANVRDDMKIAREEIFGPVQ 351
           +  DK+   ++    +GA LVAG   A  GD G +  PTV   V  +    +EE FGP+ 
Sbjct: 336 QGFDKVKRHLQDALDKGASLVAGKQPAELGD-GLFFPPTVVQGVDREXCCYQEETFGPLV 394
Query: 352 QLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
               F + EEVI+  N++++GLA+ VFT D ++   V  GLR G
Sbjct: 395 PXALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFG 438

>pdb|1QI1|A Chain A, Ternary Complex Of An Nadp Dependent Aldehyde Dehydrogenase Length = 475

Iteration: 1
 Score =  187 bits (474), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 110/301 (36%), Positives = 164/301 (54%), Gaps = 8/301 (2%)
Query: 98  FAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE 157
            A  R EPVG+   I P+N+P+ +   KIAPAL  GN I  KP  Q  ++ L +    AE
Sbjct: 136 IAVVRREPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAE 195
Query: 158 AGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELG 216
           AG+P GV N + G G + G  +V+H  V+ + FTGST +G+ + + +G   ++   LELG
Sbjct: 196 AGLPAGVFNTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELG 252
Query: 217 GKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRT 276
           GK   I+  DADL+   +    G F   GQ   A  R  V +++ DE V +  E+    T
Sbjct: 253 GKDSAIVLEDADLELTAKNIIAGAFGYSGQRSTAVKRVLVMESVADELVEKIREKVLALT 312
Query: 277 VGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVR 336
           +G+P D + +  P ID +  D +   I     +GA  +    R G+    + P +F  V 
Sbjct: 313 IGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKREGN---LICPILFDKVT 368
Query: 337 DDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
            DM++A EE FGPV  +IR +S+EE IE +N S+YGL A++FT D  +   + + L  GT
Sbjct: 369 TDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGT 428
Query: 397 L 397
           +
Sbjct: 429 V 429

>pdb|3R64|A Chain A, Crystal Structure Of A Nad-Dependent Benzaldehyde Dehydrogenase From Corynebacterium Glutamicum Length = 508

Iteration: 1
 Score =  184 bits (466), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/314 (40%), Positives = 176/314 (56%), Gaps = 11/314 (3%)
Query: 77  RYYAGFADKIHGKTIPINGDFFAYTRHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNT 135
           +  A F  ++HG+  P N        +    GV G I PWNFPL +    +APALA GN 
Sbjct: 119 KESASFPGRVHGRISPSNTPGKENRVYRVAKGVVGVISPWNFPLNLSIRSVAPALAVGNA 178
Query: 136 IVLKPAEQTPLTALAVGALI-AEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGST 193
           +V+KPA  TP+T   + A I  EAG+P GV++ V G G + G   V H     ++FTGST
Sbjct: 179 VVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPKLISFTGST 238
Query: 194 EVGKLVQQGSGASN---LKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCA 250
            VG+ V  G  A N   +K   LELGG +P ++ ADAD+DAA + A  G F + GQ C +
Sbjct: 239 PVGRRV--GELAINGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMS 296
Query: 251 GSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQG 310
            +R  V   ++DEF+ +  E  K    GDP       GP I+  Q+  + E IE  K +G
Sbjct: 297 INRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEG 356
Query: 311 AQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSD 370
           A +   G     +G  V P VF++V  DM+IAREEIFGP+  +++        E AN SD
Sbjct: 357 ATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIFGPLISVLKADDEAHAAELANASD 413
Query: 371 YGLAAAVFTKDLDK 384
           +GL+AAV++KD+D+
Sbjct: 414 FGLSAAVWSKDIDR 427

>pdb|2JG7|A Chain A, Crystal Structure Of Seabream Antiquitin And Elucidation Of Its Substrate Specificity Length = 510

Iteration: 1
 Score =  183 bits (464), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/339 (34%), Positives = 168/339 (49%), Gaps = 7/339 (2%)
Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRH-EPVGVC 109
           SL +L+ GK Y        EY +    Y  G +  I G  +P      A      PVG+ 
Sbjct: 101 SLVSLEMGKIYVEGVGEVQEY-VDVCDYAVGLSRMIGGPVLPSERPGHALIEQWNPVGLV 159
Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVV 165
           G I  +NFP+ +  W  A AL  GN  + K A  TPLT++AV  ++AE      +P  + 
Sbjct: 160 GIITAFNFPVAVYGWNNAIALTCGNVCLWKGAPTTPLTSVAVTKIVAEVLEQNNLPGAIC 219
Query: 166 NIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
           ++  G  D G A+ +   VD ++FTGST VGK+V          R  LELGG +  I+F 
Sbjct: 220 SMTCGGADIGTAMAKDERVDLLSFTGSTHVGKMVAMMV-QERFGRKLLELGGNNAIIVFE 278
Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
           DADL+  V  A F      GQ C    R  + ++++D  V R  +  K+  +GDP+D + 
Sbjct: 279 DADLNLVVPSAVFASVGTAGQRCTTTRRLMLHESVHDAVVERIAKAYKQVRIGDPWDPST 338
Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 345
             GP   K+ +D+ L  IE  K QG  LV GG      G YV+PT+   +  D  I   E
Sbjct: 339 LYGPLHTKQAVDQYLAAIEQAKQQGGTLVCGGKVMDRPGNYVEPTIITGLAHDAPIVHTE 398
Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDK 384
            F P+  +++F + EE     N    GL++++FTKDL +
Sbjct: 399 TFVPILYVLKFKTEEEAFAWNNEVQQGLSSSIFTKDLGR 437

>pdb|4F9I|A Chain A, Crystal Structure Of Proline Utilization A (Puta) From Geobacter Sulfurreducens Pca Length = 1026

Iteration: 1
 Score =  179 bits (455), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/360 (34%), Positives = 187/360 (51%), Gaps = 19/360 (5%)
Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYA------GFADKIHGKTIPINGDFFAYTRH 103
           S+ + L+ GK ++ +Y+ DV  ++  L YYA      G   ++      +N  F+     
Sbjct: 611 SAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFY----- 664
Query: 104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEG 163
           EP GV   I PWNFPL +     + A+ TGN +V KP+  T +    +  L  EAG+PEG
Sbjct: 665 EPKGVAAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEG 724
Query: 164 VVNIVPGYGDA-GAALVQHPGVDKVAFTGSTEVG-KLVQQGS----GASNLKRTTLELGG 217
           V N  PG G   G  LV HP +  +AFTGS E G +++++ +    G +N+K+   E+GG
Sbjct: 725 VFNFTPGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGG 784
Query: 218 KSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTV 277
           K+  II  DADLD AV    +  F   GQ C A SR  V D +YD+F+ R    AK   V
Sbjct: 785 KNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKV 844
Query: 278 GDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRD 337
           G   D     G   D + M  I E+ E GK +G  L      AG+ G++V  T+   ++ 
Sbjct: 845 GPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGE-GYFVPMTIIGGIKP 903
Query: 338 DMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           + +IA+EEIFGPV  ++R    ++ IE AN++ + L   +F++  +      +  R G L
Sbjct: 904 EHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNL 963

>pdb|1KY8|A Chain A, Crystal Structure Of The Non-Phosphorylating Glyceraldehyde-3- Phosphate Dehydrogenase Length = 501

Iteration: 1
 Score =  171 bits (434), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 180/355 (50%), Gaps = 20/355 (5%)
Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYT-------RHEPV 106
            ++ GKP + +   +V+ ++  LR       KI G  IP  GD+   T       R EP+
Sbjct: 102 VMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIP--GDWTYDTLETEGLVRREPL 158
Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPL-TALAVGALIAEAGIPEGVV 165
           GV   I P+N+PL     KI  +   GN +V+KP+   PL  A+AV AL+ +AG P   +
Sbjct: 159 GVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALL-DAGFPPDAI 217
Query: 166 NIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
            ++   G     +V    V  V+FTGSTEVG+ V +  G   +K+  +ELGG  P I+  
Sbjct: 218 ALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLE 274
Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
           DADLD A +    G++   GQ C A      +  +Y + V    +R     VGDP D  V
Sbjct: 275 DADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTV 334
Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVF---ANVRDDMKIA 342
           + GP I    +D+++  IE    +G +++AGG R G    YVQPT+    A+   DM + 
Sbjct: 335 DVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPTLVEAPADRVKDMVLY 392
Query: 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           + E+F PV   +    +++ IE AN   YGL AAVF +D+ K     + L  G +
Sbjct: 393 KREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAI 447

>pdb|1UXV|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score =  171 bits (433), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 180/355 (50%), Gaps = 20/355 (5%)
Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYT-------RHEPV 106
            ++ GKP + +   +V+ ++  LR       KI G  IP  GD+   T       R EP+
Sbjct: 102 VMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIP--GDWTYDTLETEGLVRREPL 158
Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPL-TALAVGALIAEAGIPEGVV 165
           GV   I P+N+PL     KI  +   GN +V+KP+   PL  A+AV AL+ +AG P   +
Sbjct: 159 GVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALL-DAGFPPDAI 217
Query: 166 NIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
            ++   G     +V    V  V+FTGSTEVG+ V +  G   +K+  +ELGG  P I+  
Sbjct: 218 ALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLE 274
Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
           DADLD A +    G++   GQ C A      +  +Y + V    +R     VGDP D  V
Sbjct: 275 DADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTV 334
Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVF---ANVRDDMKIA 342
           + GP I    +D+++  IE    +G +++AGG R G    YVQPT+    A+   DM + 
Sbjct: 335 DVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPTLVEAPADRVKDMVLY 392
Query: 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           + E+F PV   +    +++ IE AN   YGL AAVF +D+ K     + L  G +
Sbjct: 393 KREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAI 447

>pdb|2J6L|A Chain A, Structure Of Aminoadipate-Semialdehyde Dehydrogenase Length = 500

Iteration: 1
 Score =  171 bits (432), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/350 (33%), Positives = 171/350 (48%), Gaps = 15/350 (4%)
Query: 44  EFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRH 103
           E +    SL +L+ GK          EY +    Y  G +  I G  +P      A    
Sbjct: 96  EKIQVLGSLVSLEMGKILVEGVGEVQEY-VDICDYAVGLSRMIGGPILPSERSGHALIEQ 154
Query: 104 -EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA---- 158
             PVG+ G I  +NFP+ +  W  A A+  GN  + K A  T L ++AV  +IA+     
Sbjct: 155 WNPVGLVGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDN 214
Query: 159 GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGK----LVQQGSGASNLKRTTLE 214
            +P  + ++  G  D G A+ +   V+ ++FTGST+VGK    +VQ+  G     R+ LE
Sbjct: 215 KLPGAICSLTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMVQERFG-----RSLLE 269
Query: 215 LGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKR 274
           LGG +  I F DADL   V  A F      GQ C    R F+ ++I+DE V R  +   +
Sbjct: 270 LGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQ 329
Query: 275 RTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFAN 334
             VG+P+D NV  GP   K+ +   L  +E  K +G  +V GG      G YV+PT+   
Sbjct: 330 IRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTG 389
Query: 335 VRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDK 384
           +  D  IA  E F P+  + +F + EEV    N    GL++++FTKDL +
Sbjct: 390 LGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGR 439

>pdb|1UXN|A Chain A, Structural Basis For Allosteric Regulation And Substrate Specificity Of The Non-Phosphorylating Glyceraldehyde-3-Phosphate Dehydrogenase (Gapn) From Thermoproteus Tenax Length = 501

Iteration: 1
 Score =  170 bits (430), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 121/355 (34%), Positives = 179/355 (50%), Gaps = 20/355 (5%)
Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYT-------RHEPV 106
            ++ GKP + +   +V+ ++  LR       KI G  IP  GD+   T       R EP+
Sbjct: 102 VMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIP--GDWTYDTLETEGLVRREPL 158
Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPL-TALAVGALIAEAGIPEGVV 165
           GV   I P+N+PL     KI  +   GN +V+KP+   PL  A+AV AL+ +AG P   +
Sbjct: 159 GVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALL-DAGFPPDAI 217
Query: 166 NIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
            ++   G     +V    V  V+FTGSTEVG+ V +  G   +K+  +ELGG  P I+  
Sbjct: 218 ALLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLE 274
Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
           DADLD A +    G++   GQ C A      +  +Y + V    +R     VGDP D  V
Sbjct: 275 DADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTV 334
Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVF---ANVRDDMKIA 342
           + GP I    +D+++  IE    +G +++AGG R G    YVQPT     A+   DM + 
Sbjct: 335 DVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPT--YVQPTFVEAPADRVKDMVLY 392
Query: 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           + E+F PV   +    +++ IE AN   YGL AAVF +D+ K     + L  G +
Sbjct: 393 KREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAI 447

>pdb|4E4G|A Chain A, Crystal Structure Of Putative Methylmalonate-Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 521

Iteration: 1
 Score =  155 bits (392), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 96/289 (33%), Positives = 148/289 (51%), Gaps = 6/289 (2%)
Query: 100 YTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG 159
           Y+  +PVG+   I P+NFP  +  W  APA+A GN  +LKP+E+ P   + +  L  EAG
Sbjct: 157 YSIRQPVGIGAGITPFNFPGXIPXWXFAPAIACGNAFILKPSERDPSVPIRLAELXIEAG 216
Query: 160 IPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKS 219
           +P G++N+V G   A  A++ HP +  V+F GST + + V  G+ A N KR     G K+
Sbjct: 217 LPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYV-YGTAAXNGKRAQCFGGAKN 275
Query: 220 PNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTF-VQDTIYDEFVARSGERAKRRTVG 278
             II  DADLD A        + + G+ C A S    V +   +  + +     +   +G
Sbjct: 276 HXIIXPDADLDQAANALIGAGYGSAGERCXAISVAVPVGEETANRLIDKLVPXVESLRIG 335
Query: 279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGG----RAGDKGFYVQPTVFAN 334
              D   + GP + KE   +I   I+SG  QGA+LV  G     +  + G ++   +F +
Sbjct: 336 PYTDEKADXGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDD 395
Query: 335 VRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLD 383
           V  D  I + EIFGPV  ++R  + EE +      +YG   A++T+D D
Sbjct: 396 VTPDXDIYKTEIFGPVLSVVRARNYEEALSLPXKHEYGNGVAIYTRDGD 444

>pdb|3ROS|A Chain A, Crystal Structure Of Nad-Dependent Aldehyde Dehydrogenase From Lactobacillus Acidophilus Length = 484

Iteration: 1
 Score =  154 bits (390), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 171/378 (45%), Gaps = 14/378 (3%)
Query: 27  KPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKI 86
           +P ++ +I H       E  +  +   TL+ GK  + S   +VE  +    YYA      
Sbjct: 46  EPASRAEILHDIANALKEHEDELAKXXTLEXGKLLSESKE-EVELCVSICNYYAD----- 99
Query: 87  HG----KTIPINGDF-FAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPA 141
           HG    K   +N D   AY   +  GV     PWNFPL  +    AP    GN I+LK A
Sbjct: 100 HGPEXLKPTKLNSDLGNAYYLKQSTGVIXACEPWNFPLYQVIRVFAPNFIVGNPILLKHA 159
Query: 142 EQTPLTALAVGALIAEAGIPEG-VVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQ 200
              P +A     +I  AG PEG ++N+ P Y D  A ++  P +  VA TGS   G  V 
Sbjct: 160 HNVPGSAALTAKIIKRAGAPEGSLINLYPSY-DQLADIIADPRIQGVALTGSERGGSAVA 218
Query: 201 QGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTI 260
           + +G  NLK++T ELGG    I+  DAD        +    +N GQ C +  R  V+ + 
Sbjct: 219 EAAG-KNLKKSTXELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSR 277
Query: 261 YDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA 320
           YDE +            GDP + +    P   ++  +K+   ++     GA++       
Sbjct: 278 YDEVLHELKNVFSNLKAGDPLEADTTLPPXNSEKAKEKLEAQVKEAIDAGAKVFYQYPEI 337
Query: 321 GDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTK 380
             KG + +PT+  ++  D  +  +E+FGP+ ++         I+ AN+S YGL ++V   
Sbjct: 338 DSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGS 397
Query: 381 DLDKTNYVTQGLRAGTLI 398
           D+D+   V+  +  G  +
Sbjct: 398 DIDRAKKVSAQIETGXTV 415

>pdb|3EFV|A Chain A, Crystal Structure Of A Putative Succinate-Semialdehyde Dehydrogenase From Salmonella Typhimurium Lt2 With Bound Nad Length = 462

Iteration: 1
 Score =  151 bits (382), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 102/328 (31%), Positives = 155/328 (47%), Gaps = 2/328 (0%)
Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQII 113
           T + GKP   + + +V  S     +YA            +  +  A   + P+GV   I 
Sbjct: 76  TREXGKPIKQARA-EVTKSAALCDWYAEHGPAXLNPEPTLVENQQAVIEYRPLGVILAIX 134
Query: 114 PWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGD 173
           PWNFPL  +     P L  GN+ +LK A      A  +  ++AEAG P GV   V    +
Sbjct: 135 PWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQXIARILAEAGTPAGVYGWVNANNE 194
Query: 174 AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAV 233
             +  +  P +  V  TGS   G  +   +  + LK+  LELGG  P I+  DADL+ AV
Sbjct: 195 GVSQXINDPRIAAVTVTGSVRAGAAIGAQA-GAALKKCVLELGGSDPFIVLNDADLELAV 253
Query: 234 EGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDK 293
           + A  G + N GQ C A  R  V++ I   F  R    A     GDP     + GP    
Sbjct: 254 KAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKXGDPLVEENDLGPXARF 313
Query: 294 EQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQL 353
           +  D++ + +++  ++GA+L+ GG +   +G Y   TV A+V  D    R+E+FGPV  +
Sbjct: 314 DLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDXTAFRQELFGPVAAI 373
Query: 354 IRFSSIEEVIERANNSDYGLAAAVFTKD 381
                    +  AN+S++GL+A +FT D
Sbjct: 374 TVAKDAAHALALANDSEFGLSATIFTAD 401

>pdb|4H7N|A Chain A, The Structure Of Putative Aldehyde Dehydrogenase Puta From Anabaena Variabilis. Length = 474

Iteration: 1
 Score =  150 bits (379), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/301 (33%), Positives = 151/301 (50%), Gaps = 18/301 (5%)
Query: 105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPE-- 162
           P  + G I PWNFPL +      PAL  G  +V+KP+E  P        L A   +PE  
Sbjct: 126 PYPLVGVISPWNFPLTLSXIDTIPALLAGCAVVVKPSEIAP--RFVAPLLXALNTVPELR 183
Query: 163 GVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNI 222
            V+  V G G+ GA L+ +  VD V FTGS   G+ V + + A       LELGGK P I
Sbjct: 184 DVLIFVEGGGETGANLINY--VDFVCFTGSVATGREVAE-TAARRFIPAYLELGGKDPAI 240
Query: 223 IFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFD 282
           +   A+L+ A     +G   N GQ C +  R +V ++ ++EF  +   +A R  +  P  
Sbjct: 241 VLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQLIAKAHRLQLAYPLV 300
Query: 283 LNVEQGPQIDKEQM----DKILEFIESGKSQGAQLVAGGGRAGD--KGFYVQPTVFANVR 336
            +   GP I ++Q     D IL+ +E G      ++  GG+  +   G++ +PTV  NV 
Sbjct: 301 EDGAIGPIIAEKQAGIINDHILDAVEKGA-----VIHCGGKVEELGGGWWCRPTVXTNVN 355
Query: 337 DDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
              K+  EE FGP+  +  F  +EE +  AN++ YGL+AAVF    D+   V + L AG 
Sbjct: 356 HSXKVXTEETFGPIXPVXPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGA 415
Query: 397 L 397
           +
Sbjct: 416 I 416

>pdb|3LV1|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ Length = 457

Iteration: 1
 Score =  144 bits (364), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/298 (33%), Positives = 153/298 (51%), Gaps = 13/298 (4%)
Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
            Y   EP GV   I P+N+P+ +    +  A+  GNT ++KP+E TP T+  +  +IAEA
Sbjct: 124 CYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA 183
Query: 159 GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGK 218
             PE  V ++ G  D  + L+  P  D + FTGS  VGK+V Q + A +L    LELGGK
Sbjct: 184 FAPE-YVAVIQGGRDENSHLLSLP-FDFIFFTGSPNVGKVVMQAA-AKHLTPVVLELGGK 240
Query: 219 SPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVG 278
            P I+  DADLD  V    FG F N GQ C A    +V  ++ D  + R  ER K     
Sbjct: 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTCIAPDYLYVHYSVKDALLERLVERVKTELP- 299
Query: 279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDD 338
              ++N   G  + + Q+ +++  +E+  +QG  LV  G +A      +  TV   V  +
Sbjct: 300 ---EIN-STGKLVTERQVQRLVSLLEA--TQGQVLV--GSQADVSKRALSATVVDGVEWN 351
Query: 339 MKIAREEIFGPVQQLIRFSSIEEVIERAN-NSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
             +  EE+FGP+  ++ F S+   I++ N +    LA  VF KD+D    +   +++G
Sbjct: 352 DPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSG 409

>pdb|3HAZ|A Chain A, Crystal Structure Of Bifunctional Proline Utilization A (Puta) Protein Length = 1001

Iteration: 1
 Score =  144 bits (364), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 157/328 (47%), Gaps = 13/328 (3%)
Query: 77  RYYAGFADKIHGKTIPI---NGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATG 133
           RYYA    K+ G    +    G+  A T     GV   I PWNFPL +   ++  AL  G
Sbjct: 619 RYYAAQGRKLFGSETAMPGPTGESNALTMRG-RGVFVAISPWNFPLAIFLGQVTAALMAG 677
Query: 134 NTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGST 193
           N++V KPAEQTP  A    AL+ EAGIP+  + +V G G  GAAL  HP +  V FTGST
Sbjct: 678 NSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIGAALTAHPDIAGVVFTGST 737
Query: 194 EVGKLVQQGSGASNLKRTTL--ELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAG 251
           EV + + +   A +     L  E GG +  I  A A  +   +      F + GQ C A 
Sbjct: 738 EVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSAL 797
Query: 252 SRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGA 311
              FVQ+ + D  +      A+   +GDP D+    GP ID E   ++   I   K++  
Sbjct: 798 RLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEAR 857
Query: 312 QLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRF--SSIEEVIERANNS 369
              AG      +G +V P +F  + +  ++  EE+FGP+  ++R+   ++E V+     +
Sbjct: 858 LHFAG---PAPEGCFVAPHIF-ELTEAGQLT-EEVFGPILHVVRYRPENLERVLRAIERT 912
Query: 370 DYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
            YGL   V ++  D    +   ++ G +
Sbjct: 913 GYGLTLGVHSRIDDSIEAIIDRVQVGNI 940

>pdb|3LNS|A Chain A, Benzaldehyde Dehydrogenase, A Class 3 Aldehyde Dehydrogenase, With Bound Nadp+ And Benzoate Adduct Length = 457

Iteration: 1
 Score =  140 bits (353), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/298 (33%), Positives = 152/298 (51%), Gaps = 13/298 (4%)
Query: 99  AYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA 158
            Y   EP GV   I P+N+P+ +    +  A+  GNT ++KP+E TP T+  +  +IAEA
Sbjct: 124 CYVVQEPYGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA 183
Query: 159 GIPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGK 218
             PE  V ++ G  D  + L+  P  D + FTGS  VGK+V Q + A +L    LELGGK
Sbjct: 184 FAPE-YVAVIQGGRDENSHLLSLP-FDFIFFTGSPNVGKVVMQAA-AKHLTPVVLELGGK 240
Query: 219 SPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVG 278
            P I+  DADLD  V    FG F N GQ   A    +V  ++ D  + R  ER K     
Sbjct: 241 CPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLERLVERVKTELP- 299
Query: 279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDD 338
              ++N   G  + + Q+ +++  +E+  +QG  LV  G +A      +  TV   V  +
Sbjct: 300 ---EIN-STGKLVTERQVQRLVSLLEA--TQGQVLV--GSQADVSKRALSATVVDGVEWN 351
Query: 339 MKIAREEIFGPVQQLIRFSSIEEVIERAN-NSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
             +  EE+FGP+  ++ F S+   I++ N +    LA  VF KD+D    +   +++G
Sbjct: 352 DPLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSG 409

>pdb|3JU8|A Chain A, Crystal Structure Of Succinylglutamic Semialdehyde Dehydrogenase From Pseudomonas Aeruginosa. Length = 490

Iteration: 1
 Score =  137 bits (346), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 114/349 (32%), Positives = 161/349 (46%), Gaps = 14/349 (4%)
Query: 56  DNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPW 115
           + GKP   S +       +       F ++   K+ P+  D  A  RH+P GV     P+
Sbjct: 91  ETGKPLWESATEVTSXVNKVAISVQAFRERTGEKSGPL-ADATAVLRHKPHGVVAVFGPY 149
Query: 116 NFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA-LAVGALIAEAGIPEGVVNIVPGYGDA 174
           NFP  +    I PAL  GN +V KP+E TP  A L + A I +AG+P GV+N+V G  + 
Sbjct: 150 NFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWI-QAGLPAGVLNLVQGGRET 208
Query: 175 GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVE 234
           G AL  H G+D + FTGS+  G L+    G    K   LE GG +P ++   ADLDAAV 
Sbjct: 209 GVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEXGGNNPLVVEEVADLDAAVY 268
Query: 235 GAHFGLFFNMGQCCCAGSRTFV-QDTIYDEFVARSGERAKRRTVGDPFDLNVEQ-----G 288
                 F + GQ C    R  V Q    D  +AR    +    VG  FD   EQ     G
Sbjct: 269 TIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGR-FD---EQPAPFXG 324
Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             I     + +L+  E    +GAQ +    +  D    + P +  +V    +   EE FG
Sbjct: 325 AVISLSAAEHLLKAQEHLIGKGAQPLLAXTQPIDGAALLTPGIL-DVSAVAERPDEEFFG 383
Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           P+ Q+IR+S     I  AN + YGLAA + +   ++        RAG +
Sbjct: 384 PLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIV 432

>pdb|1AD3|A Chain A, Class 3 Aldehyde Dehydrogenase Complex With Nicotinamide- Adenine-Dinucleotide Length = 452

Iteration: 1
 Score =  130 bits (328), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 164/365 (44%), Gaps = 39/365 (10%)
Query: 33  KIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLR----TLRYYAGFA-DKIH 87
           ++E  Q  IN    +   +L + D GK    SY  +V + L     T++    +A D+  
Sbjct: 28  QLEALQRMINENLKSISGALAS-DLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPV 86
Query: 88  GKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLT 147
            KT     D   Y   EP+GV   I  WN+P  +    +  A+A GN ++LKP+E +   
Sbjct: 87  AKTRQTQQDDL-YIHSEPLGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHM 145
Query: 148 ALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGV-----------DKVAFTGSTEVG 196
           A  +  LI             P Y D    LV   GV           D + +TGST VG
Sbjct: 146 ADLLATLI-------------PQYMDQNLYLVVKGGVPETTELLKERFDHIMYTGSTAVG 192
Query: 197 KLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFV 256
           K+V   + A +L   TLELGGKSP  +  D DLD A     +G F N GQ C A      
Sbjct: 193 KIVM-AAAAKHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILC 251
Query: 257 QDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAG 316
             +I ++ V +  +++ +   G+    + + G  I+     ++   I++ K      VA 
Sbjct: 252 DPSIQNQIVEKL-KKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQK------VAH 304
Query: 317 GGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAA 376
           GG       Y+ PT+  +V     + +EEIFGPV  ++   S+EE I+  N  +  LA  
Sbjct: 305 GGTWDQSSRYIAPTILVDVDPQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALY 364
Query: 377 VFTKD 381
           VF+ +
Sbjct: 365 VFSNN 369

>pdb|3SZA|A Chain A, Crystal Structure Of Human Aldh3a1 - Apo Form Length = 469

Iteration: 1
 Score =  125 bits (315), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 152/325 (46%), Gaps = 35/325 (10%)
Query: 68  DVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIA 127
           ++EY ++ L  +A  AD+   KT     D   Y   EP+GV   I  WN+P  +    + 
Sbjct: 86  EIEYMIQKLPEWA--ADEPVEKTPQTQQDEL-YIHSEPLGVVLVIGTWNYPFNLTIQPMV 142
Query: 128 PALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGV--- 184
            A+A GN +VLKP+E +   A    +L+A          I+P Y D     V + GV   
Sbjct: 143 GAIAAGNAVVLKPSELSENMA----SLLA---------TIIPQYLDKDLYPVINGGVPET 189
Query: 185 --------DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGA 236
                   D + +TGST VGK++   + A +L   TLELGGKSP  +  + DLD A    
Sbjct: 190 TELLKERFDHILYTGSTGVGKIIMTAA-AKHLTPVTLELGGKSPCYVDKNCDLDVACRRI 248
Query: 237 HFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQM 296
            +G F N GQ C A        +I ++ V +  +++ +   G+    + + G  I     
Sbjct: 249 AWGKFMNSGQTCVAPDYILCDPSIQNQIVEKL-KKSLKEFYGEDAKKSRDYGRIISARHF 307
Query: 297 DKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRF 356
            +++  IE       Q VA GG       Y+ PT+  +V     + +EEIFGPV  ++  
Sbjct: 308 QRVMGLIE------GQKVAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFGPVLPIVCV 361
Query: 357 SSIEEVIERANNSDYGLAAAVFTKD 381
            S+EE I+  N  +  LA  +F+ +
Sbjct: 362 RSLEEAIQFINQREKPLALYMFSSN 386

>pdb|3V9G|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Length = 566

Iteration: 1
 Score =  116 bits (291), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 95/333 (28%), Positives = 158/333 (47%), Gaps = 19/333 (5%)
Query: 76  LRYYAGFADKIHGK---TIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALAT 132
            R+ A +A ++ G+   ++P + +   Y   E  G    I P+NF  +      APAL  
Sbjct: 173 FRFNAKYAVELEGQQPISVPPSTNSTVYRGLE--GFVAAISPFNFTAIGGNLAGAPAL-M 229
Query: 133 GNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAFTG 191
           GN ++ KP++   L + AV  ++ EAG+P  ++  VP  G   G  +     +  + FTG
Sbjct: 230 GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTG 289
Query: 192 STEVGKLVQQGSGASNLKRTTL------ELGGKSPNIIFADADLDAAVEGAHFGLFFNMG 245
           S    K + +   A NL R         E GGK+ + +   AD+++ V G     F   G
Sbjct: 290 SVPTFKHLWK-QVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGG 348
Query: 246 QCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPF-DLNVEQGPQIDKEQMDKILEFIE 304
           Q C A SR +V  +++ +   R  E   R  VGDP  D        ID +   +I +++E
Sbjct: 349 QKCSACSRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLE 408
Query: 305 SGKSQGAQLVAGGGRAGDK-GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRF--SSIEE 361
             +S  +  +  GG+  D  G++V+P +  +      I +EEIFGPV  +  +     +E
Sbjct: 409 HARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKE 468
Query: 362 VIERANN-SDYGLAAAVFTKDLDKTNYVTQGLR 393
            ++  ++ + YGL  AVF++D D     T+ LR
Sbjct: 469 TLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLR 501

>pdb|3V9J|A Chain A, Crystal Structure Of Mouse 1-Pyrroline-5-Carboxylate Dehydrogenase Complexed With Sulfate Ion Length = 563

Iteration: 1
 Score =  116 bits (290), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 96/333 (28%), Positives = 156/333 (46%), Gaps = 19/333 (5%)
Query: 76  LRYYAGFADKIHGK---TIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALAT 132
            R+ A FA ++ G+   ++P + +   Y   E  G    I P+NF  +      APAL  
Sbjct: 170 FRFNAKFAVELEGEQPISVPPSTNHTVYRGLE--GFVAAISPFNFTAIGGNLAGAPAL-M 226
Query: 133 GNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAFTG 191
           GN ++ KP++   L + AV  ++ EAG+P  ++  VP  G   G  +     +  + FTG
Sbjct: 227 GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTG 286
Query: 192 STEVGKLVQQGSGASNLKRTTL------ELGGKSPNIIFADADLDAAVEGAHFGLFFNMG 245
           S    K + +   A NL R         E GGK+ + + + AD+D+ V G     F   G
Sbjct: 287 SVPTFKHLWR-QVAQNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGG 345
Query: 246 QCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPF-DLNVEQGPQIDKEQMDKILEFIE 304
           Q C A SR +V  +++ +   R  E   R  VGDP  D        ID +   +I +++E
Sbjct: 346 QKCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLE 405
Query: 305 SGKSQGAQLVAGGGRAGDK-GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRF--SSIEE 361
             +S  +  +  GG+  +  G+YV+P +  +      I +EEIFGPV  +  +      E
Sbjct: 406 HARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRE 465
Query: 362 VIERANN-SDYGLAAAVFTKDLDKTNYVTQGLR 393
            ++  ++ + YGL  AVF +D       T+ LR
Sbjct: 466 TLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLR 498

>pdb|3V9H|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352a Length = 566

Iteration: 1
 Score =  115 bits (288), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 158/333 (47%), Gaps = 19/333 (5%)
Query: 76  LRYYAGFADKIHGK---TIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALAT 132
            R+ A +A ++ G+   ++P + +   Y   E  G    I P+NF  +      APAL  
Sbjct: 173 FRFNAKYAVELEGQQPISVPPSTNSTVYRGLE--GFVAAISPFNFTAIGGNLAGAPAL-M 229
Query: 133 GNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAFTG 191
           GN ++ KP++   L + AV  ++ EAG+P  ++  VP  G   G  +     +  + FTG
Sbjct: 230 GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTG 289
Query: 192 STEVGKLVQQGSGASNLKRTTL------ELGGKSPNIIFADADLDAAVEGAHFGLFFNMG 245
           S    K + +   A NL R         E GGK+ + +   AD+++ V G     F   G
Sbjct: 290 SVPTFKHLWK-QVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGG 348
Query: 246 QCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPF-DLNVEQGPQIDKEQMDKILEFIE 304
           Q C A +R +V  +++ +   R  E   R  VGDP  D        ID +   +I +++E
Sbjct: 349 QKCSACARLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLE 408
Query: 305 SGKSQGAQLVAGGGRAGDK-GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRF--SSIEE 361
             +S  +  +  GG+  D  G++V+P +  +      I +EEIFGPV  +  +     +E
Sbjct: 409 HARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKE 468
Query: 362 VIERANN-SDYGLAAAVFTKDLDKTNYVTQGLR 393
            ++  ++ + YGL  AVF++D D     T+ LR
Sbjct: 469 TLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLR 501

>pdb|3V9I|A Chain A, Crystal Structure Of Human 1-Pyrroline-5-Carboxylate Dehydrogenase Mutant S352l Length = 566

Iteration: 1
 Score =  114 bits (284), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/333 (28%), Positives = 157/333 (47%), Gaps = 19/333 (5%)
Query: 76  LRYYAGFADKIHGK---TIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALAT 132
            R+ A +A ++ G+   ++P + +   Y   E  G    I P+NF  +      APAL  
Sbjct: 173 FRFNAKYAVELEGQQPISVPPSTNSTVYRGLE--GFVAAISPFNFTAIGGNLAGAPAL-M 229
Query: 133 GNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDA-GAALVQHPGVDKVAFTG 191
           GN ++ KP++   L + AV  ++ EAG+P  ++  VP  G   G  +     +  + FTG
Sbjct: 230 GNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPLFGDTVTSSEHLCGINFTG 289
Query: 192 STEVGKLVQQGSGASNLKRTTL------ELGGKSPNIIFADADLDAAVEGAHFGLFFNMG 245
           S    K + +   A NL R         E GGK+ + +   AD+++ V G     F   G
Sbjct: 290 SVPTFKHLWK-QVAQNLDRFHTFPRLAGECGGKNFHFVHRSADVESVVSGTLRSAFEYGG 348
Query: 246 QCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPF-DLNVEQGPQIDKEQMDKILEFIE 304
           Q C A  R +V  +++ +   R  E   R  VGDP  D        ID +   +I +++E
Sbjct: 349 QKCSACLRLYVPHSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKSFARIKKWLE 408
Query: 305 SGKSQGAQLVAGGGRAGDK-GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRF--SSIEE 361
             +S  +  +  GG+  D  G++V+P +  +      I +EEIFGPV  +  +     +E
Sbjct: 409 HARSSPSLTILAGGKCDDSVGYFVEPCIVESKDPQEPIMKEEIFGPVLSVYVYPDDKYKE 468
Query: 362 VIERANN-SDYGLAAAVFTKDLDKTNYVTQGLR 393
            ++  ++ + YGL  AVF++D D     T+ LR
Sbjct: 469 TLQLVDSTTSYGLTGAVFSQDKDVVQEATKVLR 501

>pdb|2Y51|A Chain A, Crystal Structure Of E167a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 70.9 bits (172), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 146/339 (43%), Gaps = 51/339 (15%)
Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFA---DKIHG------KTIPINGDFFAYT 101
           ++ T ++G   N S +VD++  + TL YYA       ++H       +++  +  F A  
Sbjct: 88  AIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQH 146
Query: 102 RHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI 160
              P  GV   I  +NFP   L  K APAL +G  +++KPA  T      + A + +AGI
Sbjct: 147 VLSPTRGVALFINAFNFPSWGLWAKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGI 206
Query: 161 -PEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVG-------KLVQQGSGASNLKRTT 212
            P G ++I+   G +   L Q    D V+FTGS +           VQ+G+      R  
Sbjct: 207 LPPGALSII--CGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGA------RLN 258
Query: 213 LELGGKSPNIIFADADLDAAVEGAHFGLFF---------NMGQCCCAGSRTFVQDTIYDE 263
           +E    +  I+ ADA  D       F LF            GQ C A  R FV +   + 
Sbjct: 259 VEADSLNSAILCADATPDTPA----FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEP 314
Query: 264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA--- 320
            +     +  + TVG+P +  V  G  + +EQ + +L  I + + +   ++A    A   
Sbjct: 315 VLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEA--VLAYDSSAVPL 372
Query: 321 ----GDKGFYVQPTVF-ANVRDDMKIARE-EIFGPVQQL 353
                +    V P +F  N  D+  +  + E+FGPV  +
Sbjct: 373 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 411

>pdb|2Y52|A Chain A, Crystal Structure Of E496a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 146/339 (43%), Gaps = 51/339 (15%)
Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFA---DKIHG------KTIPINGDFFAYT 101
           ++ T ++G   N S +VD++  + TL YYA       ++H       +++  +  F A  
Sbjct: 88  AIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQH 146
Query: 102 RHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI 160
              P  GV   I  +NFP   L  K APAL +G  +++KPA  T      + A + +AGI
Sbjct: 147 VLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGI 206
Query: 161 -PEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVG-------KLVQQGSGASNLKRTT 212
            P G ++I+   G +   L Q    D V+FTGS +           VQ+G+      R  
Sbjct: 207 LPPGALSII--CGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGA------RLN 258
Query: 213 LELGGKSPNIIFADADLDAAVEGAHFGLFF---------NMGQCCCAGSRTFVQDTIYDE 263
           +E    +  I+ ADA  D       F LF            GQ C A  R FV +   + 
Sbjct: 259 VEADSLNSAILCADATPDTPA----FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEP 314
Query: 264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA--- 320
            +     +  + TVG+P +  V  G  + +EQ + +L  I + + +   ++A    A   
Sbjct: 315 VLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEA--VLAYDSSAVPL 372
Query: 321 ----GDKGFYVQPTVF-ANVRDDMKIARE-EIFGPVQQL 353
                +    V P +F  N  D+  +  + E+FGPV  +
Sbjct: 373 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 411

>pdb|2VRO|A Chain A, Crystal Structure Of Aldehyde Dehydrogenase From Burkholderia Xenovorans Lb400 Length = 532

Iteration: 1
 Score = 70.5 bits (171), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 90/339 (26%), Positives = 146/339 (43%), Gaps = 51/339 (15%)
Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFA---DKIHG------KTIPINGDFFAYT 101
           ++ T ++G   N S +VD++  + TL YYA       ++H       +++  +  F A  
Sbjct: 86  AIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQH 144
Query: 102 RHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI 160
              P  GV   I  +NFP   L  K APAL +G  +++KPA  T      + A + +AGI
Sbjct: 145 VLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGI 204
Query: 161 -PEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVG-------KLVQQGSGASNLKRTT 212
            P G ++I+   G +   L Q    D V+FTGS +           VQ+G+      R  
Sbjct: 205 LPPGALSII--CGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGA------RLN 256
Query: 213 LELGGKSPNIIFADADLDAAVEGAHFGLFF---------NMGQCCCAGSRTFVQDTIYDE 263
           +E    +  I+ ADA  D       F LF            GQ C A  R FV +   + 
Sbjct: 257 VEADSLNSAILCADATPDTPA----FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEP 312
Query: 264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA--- 320
            +     +  + TVG+P +  V  G  + +EQ + +L  I + + +   ++A    A   
Sbjct: 313 VLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEA--VLAYDSSAVPL 370
Query: 321 ----GDKGFYVQPTVF-ANVRDDMKIARE-EIFGPVQQL 353
                +    V P +F  N  D+  +  + E+FGPV  +
Sbjct: 371 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 409

>pdb|2Y53|A Chain A, Crystal Structure Of E257q Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 69.3 bits (168), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 146/339 (43%), Gaps = 51/339 (15%)
Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFA---DKIHG------KTIPINGDFFAYT 101
           ++ T ++G   N S +VD++  + TL YYA       ++H       +++  +  F A  
Sbjct: 88  AIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQH 146
Query: 102 RHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI 160
              P  GV   I  +NFP   L  K APAL +G  +++KPA  T      + A + +AGI
Sbjct: 147 VLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGI 206
Query: 161 -PEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVG-------KLVQQGSGASNLKRTT 212
            P G ++I+   G +   L Q    D V+FTGS +           VQ+G+      R  
Sbjct: 207 LPPGALSII--CGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGA------RLN 258
Query: 213 LELGGKSPNIIFADADLDAAVEGAHFGLFF---------NMGQCCCAGSRTFVQDTIYDE 263
           ++    +  I+ ADA  D       F LF            GQ C A  R FV +   + 
Sbjct: 259 VQADSLNSAILCADATPDTPA----FDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEP 314
Query: 264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA--- 320
            +     +  + TVG+P +  V  G  + +EQ + +L  I + + +   ++A    A   
Sbjct: 315 VLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEA--VLAYDSSAVPL 372
Query: 321 ----GDKGFYVQPTVF-ANVRDDMKIARE-EIFGPVQQL 353
                +    V P +F  N  D+  +  + E+FGPV  +
Sbjct: 373 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 411

>pdb|2Y5D|A Chain A, Crystal Structure Of C296a Mutant Of The Box Pathway Encoded Aldh From Burkholderia Xenovorans Lb400 Length = 534

Iteration: 1
 Score = 66.2 bits (160), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 89/339 (26%), Positives = 145/339 (42%), Gaps = 51/339 (15%)
Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFA---DKIHG------KTIPINGDFFAYT 101
           ++ T ++G   N S +VD++  + TL YYA       ++H       +++  +  F A  
Sbjct: 88  AIATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQH 146
Query: 102 RHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI 160
              P  GV   I  +NFP   L  K APAL +G  +++KPA  T      + A + +AGI
Sbjct: 147 VLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGI 206
Query: 161 -PEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVG-------KLVQQGSGASNLKRTT 212
            P G ++I+   G +   L Q    D V+FTGS +           VQ+G+      R  
Sbjct: 207 LPPGALSII--CGSSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGA------RLN 258
Query: 213 LELGGKSPNIIFADADLDAAVEGAHFGLFF---------NMGQCCCAGSRTFVQDTIYDE 263
           +E    +  I+ ADA  D       F LF            GQ   A  R FV +   + 
Sbjct: 259 VEADSLNSAILCADATPDTPA----FDLFIKEVVREMTVKSGQKATAIRRAFVPEAALEP 314
Query: 264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA--- 320
            +     +  + TVG+P +  V  G  + +EQ + +L  I + + +   ++A    A   
Sbjct: 315 VLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEA--VLAYDSSAVPL 372
Query: 321 ----GDKGFYVQPTVF-ANVRDDMKIARE-EIFGPVQQL 353
                +    V P +F  N  D+  +  + E+FGPV  +
Sbjct: 373 IDADANIAACVAPHLFVVNDPDNATLLHDVEVFGPVASV 411

>pdb|3V4C|A Chain A, Crystal Structure Of A Semialdehyde Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 528

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 38/102 (37%), Positives = 48/102 (47%), Gaps = 7/102 (6%)
Query: 103 HEPVGVCGQIIPWNFPLLM--LAWKIAPALATGNTIVLKPAEQTP----LTALAVGALIA 156
             PVG        NFPL         A ALA G  +V+K     P    + A AV A I 
Sbjct: 167 QRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIR 226
Query: 157 EAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGK 197
           + G+  GV +++ G   D G ALVQHP +  V FTGS   G+
Sbjct: 227 KTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGR 268

>pdb|3MY7|A Chain A, The Crystal Structure Of The Acdh Domain Of An Alcohol Dehyd From Vibrio Parahaemolyticus To 2.25a Length = 452

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 68/173 (39%), Gaps = 12/173 (6%)
Query: 101 TRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI 160
           T  EPVG+   I+P   P     +K   +L T N I+  P  +   +      L+ +A +
Sbjct: 99  TIAEPVGIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAV 158
Query: 161 PEGVVNIVPGYGDAGA-----ALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLEL 215
             G    + G+ D  +     AL +H  +  +  TG     K       A +  +  + +
Sbjct: 159 AAGAPKDIIGWIDQPSVELSNALXKHDDIALILATGGPGXVK------AAYSSGKPAIGV 212
Query: 216 G-GKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR 267
           G G  P +I   AD+  AV        F+ G  C +     V D +YDE   R
Sbjct: 213 GAGNVPVVIDETADIKRAVASVLXSKTFDNGVVCASEQAVIVVDEVYDEVKER 265

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	442
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	0.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	3e-05
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	0.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	2e-05
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	0.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	0.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	0.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	0.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	0.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	0.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	0.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	0.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	0.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	0.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	0.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	0.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	0.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	0.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	0.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	0.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	0.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	1e-172
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	1e-172
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	1e-172
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	1e-172
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	1e-153
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	1e-149
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	1e-145
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	1e-144
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	1e-143
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	1e-133
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	1e-132
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	1e-131
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	1e-131
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	1e-131
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	1e-130
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	1e-129
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	1e-129
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	1e-114
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	1e-112
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	1e-108
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	6e-93
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	7e-87
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	3e-84
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	1e-80
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	1e-80
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	1e-64
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	1e-59
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	4e-05

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score =  690 bits (1783), Expect = 0.0
 Identities = 221/347 (63%), Positives = 284/347 (81%), Gaps = 1/347 (0%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCG 110
           ++E ++ GK ++ +Y +D+   ++TLRY AG+ADKI G+TIP++G+FF YTR EPVGVCG
Sbjct: 105 TMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCG 164

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
           QIIPWNFPLLM  WKI PAL+ GNT+V+KPAEQTPLTAL +G+LI EAG P GVVNIVPG
Sbjct: 165 QIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPG 224

Query: 171 YG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           YG  AGAA+  H  VDKVAFTGSTEVGKL+++ +G SNLKR +LELGGKSP I+FADADL
Sbjct: 225 YGPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADL 284

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           D AVE AH G+F++ GQCC A SR FV+++IYDEFV RS ERAK+  +G+P    V QGP
Sbjct: 285 DNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGP 344

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP 349
           QIDKEQ +KIL+ IESGK +GA+L  GGG  G+KG+++QPTVF++V DDM+IA+EEIFGP
Sbjct: 345 QIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGP 404

Query: 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           VQQ+++F S+++VI+RANN+ YGL+A +FT D+DK   V+  L++GT
Sbjct: 405 VQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGT 451

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A* Length = 501

 Score = 45.2 bits (108), Expect = 3e-05
 Identities = 11/38 (28%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 21 SAAAVPKPITKPKIEHTQLFINNEFVNAQS--SLETLD 56
          +   VP P+T  + ++T++FINNE+ ++ S       +
Sbjct: 5  AMPDVPAPLTNLQFKYTKIFINNEWHSSVSGKKFPVFN 42

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score =  689 bits (1781), Expect = 0.0
 Identities = 244/347 (70%), Positives = 289/347 (83%), Gaps = 1/347 (0%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCG 110
           +LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVCG
Sbjct: 104 ALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCG 163

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
           QIIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVPG
Sbjct: 164 QIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPG 223

Query: 171 YG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           +G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD+
Sbjct: 224 FGPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADM 283

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           D AVE AHF LFFN GQC CAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQGP
Sbjct: 284 DWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGP 343

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP 349
           Q+D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFGP
Sbjct: 344 QVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGP 403

Query: 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           V Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT
Sbjct: 404 VMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 450

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ... Length = 500

 Score = 46.0 bits (110), Expect = 2e-05
 Identities = 14/38 (36%), Positives = 24/38 (63%), Gaps = 2/38 (5%)

Query: 21 SAAAVPKPITKPKIEHTQLFINNEFVNAQS--SLETLD 56
          +  AVP P  +P++   Q+FINNE+ +A S  +  T++
Sbjct: 4  ATQAVPAPNQQPEVFCNQIFINNEWHDAVSRKTFPTVN 41

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A* Length = 517

 Score =  680 bits (1757), Expect = 0.0
 Identities = 167/353 (47%), Positives = 235/353 (66%), Gaps = 7/353 (1%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN----GDFFAYTRHEPV 106
           ++E LD G  Y ++    V  S++T RY+AG+ DKI G TIPIN          T+ EPV
Sbjct: 120 TIEALDAGAVYTLALKTHVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKEPV 179

Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVN 166
           GVCG +IPWN+PL+ML+WK A  LA GNT+V+KPA+ TPLTAL    L  +AGIP+GVVN
Sbjct: 180 GVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVN 239

Query: 167 IVPGYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
           I+PG G   G  L  HP V K+ FTGSTEVGK + +    SN+K+ +LELGGKSP IIFA
Sbjct: 240 ILPGSGSLVGQRLSDHPDVRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFA 299

Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
           D DL+ AV+     +FFN G+ C A  R FV+++I+++FV +  E  ++  +G+P + + 
Sbjct: 300 DCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQFVQKVVEEVEKMKIGNPLERDT 359

Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 345
             GPQ  +  + K++E+ + G  +GA LV GG +    GF+ QPTVF +V D M IA+EE
Sbjct: 360 NHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAKEE 419

Query: 346 IFGPVQQLIRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
            FGP+  + RF+   ++ V+ RAN +++GLA+ VFT+D++K  YV+  L+AGT
Sbjct: 420 SFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGT 472

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A* Length = 503

 Score =  665 bits (1718), Expect = 0.0
 Identities = 152/353 (43%), Positives = 213/353 (60%), Gaps = 8/353 (2%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC 109
           + LE ++NGK    +   D++ + + + YYAG A  + G+ I + G  FAYTR EP+GVC
Sbjct: 101 AKLEVINNGKTITEAE-YDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVC 159

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             I+ WN+P ++ AWK APALA GN +V KP+  TP+T + +  +  EAG+P G+VN+V 
Sbjct: 160 AGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQ 219

Query: 170 GYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
           G  + G+ L  HP V KV+FTGS   GK V + S A  +K  TLELGGKSP +IF D +L
Sbjct: 220 GGAETGSLLCHHPNVAKVSFTGSVPTGKKVMEMS-AKTVKHVTLELGGKSPLLIFKDCEL 278

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           + AV GA    F   GQ C  G+R FVQ  I  +F+    +R K   VGDP       G 
Sbjct: 279 ENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGG 338

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAG------DKGFYVQPTVFANVRDDMKIAR 343
            I K Q+DK+L F+   K +GA+++ GG            G+++ P V  N RDDM   +
Sbjct: 339 LISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVK 398

Query: 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           EEIFGPV  ++ F + EEV++RANN+ +GLA+ VFT+D+ + + V   L AGT
Sbjct: 399 EEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens} Length = 517

 Score =  666 bits (1720), Expect = 0.0
 Identities = 162/351 (46%), Positives = 216/351 (61%), Gaps = 6/351 (1%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFA-DKIHGKTIPINGDFFAYTRHEPVGV 108
           S+LETLD GKP   +   D         ++ G A   ++G  IP+ GDF AYT+  P+GV
Sbjct: 95  STLETLDTGKPIQETIVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVPLGV 153

Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
           C  I  WN+P  +  WK APAL  GN +V KP+E TPL AL +  ++ EAG+P+G+ N++
Sbjct: 154 CVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVI 213

Query: 169 PGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
            G  D G  LV HP V KV+ TGS   G+ V   + A +LK  T+ELGGKSP I+F DAD
Sbjct: 214 QGDRDTGPLLVNHPDVAKVSLTGSVPTGRKVAAAA-AGHLKHVTMELGGKSPMIVFDDAD 272

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           +++AV GA  G F++ GQ C  G+R FVQ      F+     R +   +GDP D     G
Sbjct: 273 IESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLG 332

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGG---RAGDKGFYVQPTVFANVRDDMKIAREE 345
           P + K Q +K+L +IE GK++GA L+ GGG       +G YVQPTVFA+V DDM IAREE
Sbjct: 333 PLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQPTVFADVTDDMTIAREE 392

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           IFGPV  ++ F   +EV+ RAN +++GLA  VFT DL + + V  GL AGT
Sbjct: 393 IFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGT 443

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti} Length = 528

 Score =  661 bits (1708), Expect = 0.0
 Identities = 143/349 (40%), Positives = 210/349 (60%), Gaps = 5/349 (1%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGVC 109
            +E+L+ GKP   +   ++ +      Y AG A  + G+T   I  D       EPVGV 
Sbjct: 107 LIESLEVGKPIAQARG-EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGVV 165

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           G I PWNFP ++ + ++  A+ +G T+VLKP+E T  T++ +  L  EAGIP+GV N+V 
Sbjct: 166 GIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVT 225

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           GYG  AG  L + P VD VAFTGS  VG  + + + A  +KR  LELGGK P I+FADAD
Sbjct: 226 GYGDPAGQVLAEDPNVDMVAFTGSVRVGTKLGEIA-ARTVKRVGLELGGKGPQIVFADAD 284

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LDAA +G  +G++ N GQCC +GSR  VQ+ I D  + R  + +++   GDP +   + G
Sbjct: 285 LDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIG 344

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIAREEIF 347
             I +   +K+  ++ +G + GA+L+ GG R G + G Y  PTVFA V  DM IAREEIF
Sbjct: 345 AMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEIF 404

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           GPV   + F + +E +  AN +++GL+A+V++ +L+      + +RAG 
Sbjct: 405 GPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGR 453

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A* Length = 520

 Score =  660 bits (1704), Expect = 0.0
 Identities = 154/352 (43%), Positives = 212/352 (60%), Gaps = 8/352 (2%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGVC 109
            LETLD GK    SY  D++       Y+AG ADK  G+ I     D  +    EPVGV 
Sbjct: 116 RLETLDTGKTLEESY-ADMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGVV 174

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
            QI PWN+PLL  +WKIAPALATG ++V+KP+E TPLT + V  L+ E G P+G +N++ 
Sbjct: 175 TQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLIL 234

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G G + G  +  H  VD V+FTG  E GK + + + A+N+    LELGGK+PNIIF DAD
Sbjct: 235 GAGSEVGDVMSGHKEVDLVSFTGGIETGKHIMKNA-ANNVTNIALELGGKNPNIIFDDAD 293

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
            + AV+ A  G +F+ GQ C AGSR  VQ++I D+F     +R K+  +G+ FD + E G
Sbjct: 294 FELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMG 353

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIARE 344
           P I  E  +KI  +++  K++GA +  GG R        G + +PTV  N    M+I +E
Sbjct: 354 PVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQE 413

Query: 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           E+FGPV  +  F + +E I+ AN+S YGLA AVF+KD+ K   V   L+ GT
Sbjct: 414 EVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGT 465

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} PDB: 3iwk_A* 4a0m_A* Length = 503

 Score =  658 bits (1701), Expect = 0.0
 Identities = 148/353 (41%), Positives = 213/353 (60%), Gaps = 9/353 (2%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI----NGDFFAYTRHEPV 106
            LE++D GKP + +   D++       YYA  A+K+  +           F ++   EP+
Sbjct: 94  KLESIDCGKPLDEAA-WDIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREPI 152

Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVN 166
           GV G I PWN+P+LM  WK+APALA G   +LKP+E   LT L +G +  E G+P GV+N
Sbjct: 153 GVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLN 212

Query: 167 IVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
           I+ G G +AGA L  HP VDKVAFTGS+  G  +   + A  +K  +LELGGKSP ++F 
Sbjct: 213 ILTGLGPEAGAPLATHPDVDKVAFTGSSATGSKIMTAA-AQLVKPVSLELGGKSPLVVFE 271

Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
           D DLD A E A FG F+  GQ C A SR  + ++I  EF+ R  +  K   + DP +   
Sbjct: 272 DVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEFLNRIVKWIKNIKISDPLEEGC 331

Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIAR 343
             GP + + Q +KIL+F+ + KS+GA ++ GG R     KGF+++PT+  +V  +M+I R
Sbjct: 332 RLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIWR 391

Query: 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           EE+FGPV  +  FS+ EE I+ AN++ YGL AAV + DL++   VT+  +AG 
Sbjct: 392 EEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGI 444

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A Length = 495

 Score =  646 bits (1669), Expect = 0.0
 Identities = 133/349 (38%), Positives = 202/349 (57%), Gaps = 5/349 (1%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGVC 109
            LE+ + GKP + +++ ++   +   R++AG A  ++G           +  R +P+GV 
Sbjct: 104 ELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVV 163

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             I PWN+PL+M AWK+APALA GN +VLKP+E TPLTAL +  L  +   P GVVNI+ 
Sbjct: 164 ASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILF 222

Query: 170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G G   G  L  HP V  V+ TGS   G+ +   + AS++KRT +ELGGK+P I+F DAD
Sbjct: 223 GRGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHT-ASSIKRTHMELGGKAPVIVFDDAD 281

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           ++A VEG     ++N GQ C A  R + Q  IYD  V + G        G P D + E G
Sbjct: 282 IEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELG 341

Query: 289 PQIDKEQMDKILEFIESGKSQG-AQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           P      ++++ + +E  K+ G  +++ GG +    G+Y  PT+ A    D  I ++E+F
Sbjct: 342 PLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVF 401

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           GPV  +  F + E+V+  AN+S YGLA++V+TKD+ + + V+  L+ G 
Sbjct: 402 GPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGC 450

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A* Length = 498

 Score =  644 bits (1665), Expect = 0.0
 Identities = 138/349 (39%), Positives = 200/349 (57%), Gaps = 5/349 (1%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PINGDFFAYTRHEPVGVC 109
           +LE L+ GKP N   + ++   +   R++AG    +H            +  R +P+G+ 
Sbjct: 106 ALEALNCGKPINAVKNDELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIGIV 165

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           G I PWN+PL+M+AWK+APA+  GNT+V KP+EQTPLTAL +  LIA+  +PEGVVN++ 
Sbjct: 166 GSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVIT 224

Query: 170 GYGD-AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G G+  G AL+ HP V  V+ TG    GK V   + A  +KRT LELGGK+P I++ DAD
Sbjct: 225 GRGETVGNALINHPKVGMVSITGDIATGKKVLAAA-AKTVKRTHLELGGKAPVIVYGDAD 283

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           L+A V G     ++N GQ C A  R + +  IY++ VA               D   E G
Sbjct: 284 LEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIG 343

Query: 289 PQIDKEQMDKILEFIESGKSQG-AQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           P I + Q D++  F+E    Q   ++  GG    D+GF+ QPTV A    + +I R E+F
Sbjct: 344 PLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRREVF 403

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           GPV  + RF+  ++ +  AN+SDYGLA++V+TKD+ K       L+ G 
Sbjct: 404 GPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGC 452

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus} Length = 515

 Score =  645 bits (1665), Expect = 0.0
 Identities = 154/356 (43%), Positives = 220/356 (61%), Gaps = 13/356 (3%)

Query: 51  SLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADK-IHGKTIPINGDFFAYTRHEPVGVC 109
            +E LD G+   +     V  +     +YA +A+  +  +T P++ D+  YT   P G  
Sbjct: 108 VMECLDAGQVLRIVR-AQVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGPV 166

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
           G I PWN PL++  W+IAPALA GNT+VLKPAE +P TA  +  ++ EA +P GV N+V 
Sbjct: 167 GIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQ 226

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
           G+G +AGAALV HP V  +  TG TE GK+V + + A +LKR + ELGGKSP ++FADAD
Sbjct: 227 GFGEEAGAALVAHPLVPLLTLTGETETGKIVMRNA-ADHLKRLSPELGGKSPALVFADAD 285

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           L+ A++   F +F   G+ C A SR  V++ I+++FV +  ERA+   VG P D   E G
Sbjct: 286 LERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVG 345

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--------DKGFYVQPTVFANVRDDMK 340
           P I  E + ++L ++E+GK +GA+L+ GG RA          +G Y+ PTVF    + MK
Sbjct: 346 PLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHMK 404

Query: 341 IAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           IA+EEIFGPV   I F   EE + +AN++ YGLAA VFT+DL++ + +   L AG 
Sbjct: 405 IAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGM 460

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis} Length = 495

 Score =  591 bits (1526), Expect = 0.0
 Identities = 148/347 (42%), Positives = 201/347 (57%), Gaps = 3/347 (0%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           L   + G+P  +  ++    S+  + Y+AG ADK+            +    EPVGV G 
Sbjct: 93  LLAAETGQPPTIIETMHWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGVVGA 152

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I+ WN PL +   KIAPAL  G TIVLKPA +TPLTA A+  + AE G+PEGV+++VPG 
Sbjct: 153 IVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGG 212

Query: 172 GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
            + G AL  +P +D   FTGS+ VG+ V + + A  LK  TLELGGKS  II  D DL A
Sbjct: 213 IETGQALTSNPDIDMFTFTGSSAVGREVGRRA-AEMLKPCTLELGGKSAAIILEDVDLAA 271

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           A+    F    N GQ C   +R     + YDE VA          VG P D   + GP I
Sbjct: 272 AIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLI 331

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIAREEIFGP 349
            ++Q  ++  +I  G  +GA+LV GGGR    D GF++QPTVFA+V + M IA+EEIFGP
Sbjct: 332 SEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEIFGP 391

Query: 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           V  +I + + E+ I  AN+S YGLA +V+T D+ K   ++Q +R GT
Sbjct: 392 VLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGT 438

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A Length = 538

 Score =  586 bits (1512), Expect = 0.0
 Identities = 127/355 (35%), Positives = 191/355 (53%), Gaps = 9/355 (2%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIH-GKTIPINGDFFAYTRHEPVGV 108
           S+    + GKP+  +   D   ++  L YYA    +++ GK I           + P+GV
Sbjct: 117 SAWLVHEAGKPWKEAD-ADTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGV 175

Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
              I PWNF L ++       + TGNT+VLKPA  TP+ A     ++ +AG+P+GV+N V
Sbjct: 176 TVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYV 235

Query: 169 PGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQ-----GSGASNLKRTTLELGGKSPNI 222
           PG G + G  LV HP    + FTGS +VG  + +       G ++LKR  +E+GGK   +
Sbjct: 236 PGSGAEVGDYLVDHPKTSLITFTGSKDVGVRLYERAAVVRPGQNHLKRVIVEMGGKDTVV 295

Query: 223 IFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFD 282
           +  DADLD A E      F   GQ C AGSR  +   +YDE + ++   AK  TVGDP +
Sbjct: 296 VDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTN 355

Query: 283 LNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA 342
            +   GP ID++  +KI+ +IE GK +G +L+ GG      GF++QPT+ A++  +  I 
Sbjct: 356 RDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVIM 414

Query: 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           +EEIFGPV    + +  +  +E ANN++YGL  AV T++        +    G L
Sbjct: 415 QEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNL 469

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae} Length = 497

 Score =  577 bits (1490), Expect = 0.0
 Identities = 129/349 (36%), Positives = 204/349 (58%), Gaps = 6/349 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
             +++ G P +M+ +         +R +     +   +   I G+  A   ++ +GV G 
Sbjct: 108 TISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEALIEGNEQAILHYDAIGVVGL 167

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I PWN+P+  +  K+ PAL  G T+VLKP+E  PL+A+    ++ EA +P GV N++ G 
Sbjct: 168 ITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGD 227

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G + G+ L  HP ++ ++FTGST  GK + + + ++ LKR  LELGGK  NIIFADAD+D
Sbjct: 228 GANVGSYLSAHPDLEMISFTGSTRAGKDISKNA-SNTLKRVCLELGGKGANIIFADADID 286

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
            A++      F+N GQ C A +R  V+  IYD+ +  + + A++  VG         GP 
Sbjct: 287 -ALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPV 345

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAG---DKGFYVQPTVFANVRDDMKIAREEIF 347
           + KEQ DKI + I+SG  +GA LV GG       ++G+YV+PTVFA+V+  M+I REEIF
Sbjct: 346 VSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFREEIF 405

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           GPV  L+ F++ +E +  AN+++YGL   + ++D  K   +   +R+G 
Sbjct: 406 GPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGM 454

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A* Length = 516

 Score =  571 bits (1474), Expect = 0.0
 Identities = 122/356 (34%), Positives = 183/356 (51%), Gaps = 11/356 (3%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPING--DFFAYTRHEPVG 107
            +    + GK +  +   DV  ++  + YYA  A +     + +         + + P+G
Sbjct: 117 EATLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLG 175

Query: 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNI 167
               I PWNFP+ +    I   +A GNT++ KPAE   +    V  +  EAG P GVVN 
Sbjct: 176 AGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNF 235

Query: 168 VPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQ-----GSGASNLKRTTLELGGKSPN 221
           +PG G + GA LV+HP +  + FTGS EVG  + +       G +  KR  +E GGK+  
Sbjct: 236 LPGVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAI 295

Query: 222 IIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPF 281
           I+   AD D A EG     +   GQ C A SR  +    Y+  + R  +RA+R +VG P 
Sbjct: 296 IVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PA 354

Query: 282 DLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKI 341
           + N + GP +  EQ  K+L +IE GK++G  LV GG R   +G+++ PTVF  V    +I
Sbjct: 355 EENPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLGGKRLEGEGYFIAPTVFTEVPPKARI 413

Query: 342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           A+EEIFGPV  +IR     E +E AN++ YGL   V+++  +   +  +    G L
Sbjct: 414 AQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus} Length = 478

 Score =  566 bits (1462), Expect = 0.0
 Identities = 124/349 (35%), Positives = 190/349 (54%), Gaps = 9/349 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
             T + G P ++S  V  +  L          D    +    +         E +GV G 
Sbjct: 90  AITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEERRGD----DLVVKEAIGVSGL 145

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I PWNFP    + K+A A A G+ +VLKP+E+TP  A+ +  +  + G+P+GV N+V G 
Sbjct: 146 ITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGD 205

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G   G  L +HP V  ++FTGS   G  + + + A + K+ +LELGGKSP I+  D D+ 
Sbjct: 206 GAGVGNPLSEHPKVRMMSFTGSGPTGSKIMEKA-AKDFKKVSLELGGKSPYIVLDDVDIK 264

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
            A +     +  N GQ C AG+R  V + I D F+A   E+  +  VG+P +   + GP 
Sbjct: 265 EAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPI 324

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAG---DKGFYVQPTVFANVRDDMKIAREEIF 347
           I K+Q D++  +I  G  +GA+L  GG       +KG++ +PT+F NV + M IA+EEIF
Sbjct: 325 ISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEEIF 384

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           GPV  +I ++ ++E I+ AN++ YGLA  V  KD +  + V + + AGT
Sbjct: 385 GPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGT 433

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum} Length = 508

 Score =  545 bits (1406), Expect = 0.0
 Identities = 125/349 (35%), Positives = 185/349 (53%), Gaps = 8/349 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPING-DFFAYTRHEPVGVCG 110
               ++G   + +  +++  +    +  A F  ++HG+  P N             GV G
Sbjct: 95  WLIKESGSTRSKAN-LEITLAGNITKESASFPGRVHGRISPSNTPGKENRVYRVAKGVVG 153

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA-EAGIPEGVVNIVP 169
            I PWNFPL +    +APALA GN +V+KPA  TP+T   + A I  EAG+P GV++ V 
Sbjct: 154 VISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVA 213

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLV-QQGSGASNLKRTTLELGGKSPNIIFADA 227
           G G + G   V H     ++FTGST VG+ V +       +K   LELGG +P ++ ADA
Sbjct: 214 GAGSEIGDHFVTHAVPKLISFTGSTPVGRRVGELAINGGPMKTVALELGGNAPFVVLADA 273

Query: 228 DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQ 287
           D+DAA + A  G F + GQ C + +R  V   ++DEF+ +  E  K    GDP       
Sbjct: 274 DIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLV 333

Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           GP I+  Q+  + E IE  K +GA +   G     +G  V P VF++V  DM+IAREEIF
Sbjct: 334 GPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAREEIF 390

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           GP+  +++        E AN SD+GL+AAV++KD+D+       + +G 
Sbjct: 391 GPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGM 439

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A* Length = 501

 Score =  513 bits (1323), Expect = 0.0
 Identities = 114/353 (32%), Positives = 171/353 (48%), Gaps = 14/353 (3%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-----NGDFFAYTRHEPV 106
           +  ++ GKP + +   +V+ ++  LR       KI G  IP        +     R EP+
Sbjct: 100 VLVMNAGKPKSAAV-GEVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPL 158

Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVN 166
           GV   I P+N+PL     KI  +   GN +V+KP+   PL A      + +AG P   + 
Sbjct: 159 GVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIA 218

Query: 167 IVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFAD 226
           ++   G     +V    V  V+FTGSTEVG+ V +  G   +K+  +ELGG  P I+  D
Sbjct: 219 LLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLED 275

Query: 227 ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVE 286
           ADLD A +    G++   GQ C A      +  +Y + V    +R     VGDP D  V+
Sbjct: 276 ADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVD 335

Query: 287 QGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVF---ANVRDDMKIAR 343
            GP I    +D+++  IE    +G +++AGG R G    YVQPT     A+   DM + +
Sbjct: 336 VGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLG--PTYVQPTFVEAPADRVKDMVLYK 393

Query: 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
            E+F PV   +    +++ IE AN   YGL AAVF +D+ K     + L  G 
Sbjct: 394 REVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGA 446

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A* Length = 505

 Score =  492 bits (1268), Expect = e-172
 Identities = 129/352 (36%), Positives = 189/352 (53%), Gaps = 15/352 (4%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI------NGDFFAYTRHEP 105
           L   +  KP   +   +V  +   +R+ A  A +++G+T+        +    A    EP
Sbjct: 94  LIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVEREP 152

Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           +GV   I P+N+P+ + A KIAPAL TGNT+V KPA Q  L+ + +   +A+AG PEG++
Sbjct: 153 LGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGII 212

Query: 166 NIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
            +V G G   G  LV+HPG+D + FTG T  G+ + + +    +    LELGGK P I+ 
Sbjct: 213 QVVTGRGSVIGDHLVEHPGIDMITFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVL 269

Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
            DADL         G F   GQ C A  R FVQD++ D+ VA   E  ++ TVG P D +
Sbjct: 270 DDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVADQLVANIKELVEQLTVGSPED-D 328

Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
            +  P ID++    I   I+     GA L++G  R   +G  + PT+  +V   M++A E
Sbjct: 329 ADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVAWE 385

Query: 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           E FGPV  +IR     E I  +N SDYGL A++FTKD D+   + + L  GT
Sbjct: 386 EPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGT 437

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A* Length = 534

 Score =  493 bits (1271), Expect = e-172
 Identities = 81/377 (21%), Positives = 142/377 (37%), Gaps = 35/377 (9%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDF----------FAYT 101
           + T ++G   N S +VD++  + TL YYA     +       +G              + 
Sbjct: 89  IATANSGTTRNDS-AVDIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQHV 147

Query: 102 RHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI- 160
                GV   I  +NFP   L  K APAL +G  +++KPA  T      + A + +AGI 
Sbjct: 148 LSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGIL 207

Query: 161 PEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGAS-NLKRTTLELGGKS 219
           P G ++I+ G   +   L Q    D V+FTGS +    ++          R  ++    +
Sbjct: 208 PPGALSIICG--SSAGLLDQIRSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLN 265

Query: 220 PNIIFADAD-----LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKR 274
             I+ ADA       D  ++     +    GQ C A  R FV +   +  +     +  +
Sbjct: 266 SAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIRRAFVPEAALEPVLEALKAKLAK 325

Query: 275 RTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA-----GDKGFYVQP 329
            TVG+P +  V  G  + +EQ + +L  I + + +                 +    V P
Sbjct: 326 ITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAACVAP 385

Query: 330 TVF--ANVRDDMKIAREEIFGPVQQLIRFSSI--------EEVIERANNSDYGLAAAVFT 379
            +F   +  +   +   E+FGPV  +  +              +  A      L A++++
Sbjct: 386 HLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYS 445

Query: 380 KDLDKTNYVTQGLRAGT 396
            D      +   L    
Sbjct: 446 NDDAHLGRLALELADSH 462

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A* Length = 486

 Score =  491 bits (1266), Expect = e-172
 Identities = 125/350 (35%), Positives = 195/350 (55%), Gaps = 15/350 (4%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           +  +D GKP   +  V+VE S+ T +  A +  +   + IP + D   +TR EPVG+ G 
Sbjct: 79  ILAIDAGKPIKQAR-VEVERSIGTFKLAAFYVKEHRDEVIPSD-DRLIFTRREPVGIVGA 136

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVVNI 167
           I P+NFPL + A KIAPA+ATGN IV  P+ + PL  + +  +I  A     +P GV N+
Sbjct: 137 ITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNL 196

Query: 168 VPGYGDA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFAD 226
           + G G+  G  +V +  V+ ++FTGS++VG+L+ + +G    K+  LELGG +PNI+  D
Sbjct: 197 LTGAGEVVGDEIVVNEKVNMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKD 253

Query: 227 ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVE 286
           ADL+ AV     G F   GQ C +     V ++I D+F+     +AK   VG+P D   +
Sbjct: 254 ADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTD 313

Query: 287 QGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI 346
            GP I  E  + + + +E    +G +L+ GG R         PT+   V  D  + + E 
Sbjct: 314 VGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKTET 369

Query: 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           F PV  +IR +  EE+I+ AN+++YGL +A+FT D++K+    + L  G 
Sbjct: 370 FAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGG 418

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa} Length = 490

 Score =  490 bits (1265), Expect = e-172
 Identities = 105/347 (30%), Positives = 153/347 (44%), Gaps = 4/347 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           +   + GKP   S + +V   +  +        +  G+      D  A  RH+P GV   
Sbjct: 87  VIGEETGKPLWES-ATEVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVVAV 145

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
             P+NFP  +    I PAL  GN +V KP+E TP  A        +AG+P GV+N+V G 
Sbjct: 146 FGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGG 205

Query: 172 GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
            + G AL  H G+D + FTGS+  G L+    G    K   LE+GG +P ++   ADLDA
Sbjct: 206 RETGVALAAHRGLDGLFFTGSSRTGNLLHSQFGGQPQKILALEMGGNNPLVVEEVADLDA 265

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIY-DEFVARSGERAKRRTVGDPF-DLNVEQGP 289
           AV       F + GQ C    R  V    + D  +AR    +    VG          G 
Sbjct: 266 AVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLARLVAVSATLRVGRFDEQPAPFMGA 325

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP 349
            I     + +L+  E    +GAQ +    +  D    + P +  +V    +   EE FGP
Sbjct: 326 VISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGIL-DVSAVAERPDEEFFGP 384

Query: 350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           + Q+IR+S     I  AN + YGLAA + +   ++        RAG 
Sbjct: 385 LLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGI 431

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A* Length = 475

 Score =  441 bits (1136), Expect = e-153
 Identities = 118/352 (33%), Positives = 181/352 (51%), Gaps = 15/352 (4%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPING------DFFAYTRHEP 105
           + + +  K Y  + S +V  +   + Y A    ++ G+ +             A  R EP
Sbjct: 85  ILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREP 143

Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVV 165
           VG+   I P+N+P+ +   KIAPAL  GN I  KP  Q  ++ L +    AEAG+P GV 
Sbjct: 144 VGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVF 203

Query: 166 NIVPGYGDA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           N + G G   G  +V+H  V+ + FTGST +G+ + + +G   ++   LELGGK   I+ 
Sbjct: 204 NTITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVL 260

Query: 225 ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLN 284
            DADL+   +    G F   GQ C A  R  V +++ DE V +  E+    T+G+P D +
Sbjct: 261 EDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-D 319

Query: 285 VEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE 344
            +  P ID +  D +   I     +GA  +    R   +G  + P +F  V  DM++A E
Sbjct: 320 ADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWE 376

Query: 345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           E FGPV  +IR +S+EE IE +N S+YGL A++FT D  +   + + L  GT
Sbjct: 377 EPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGT 428

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A* Length = 479

 Score =  431 bits (1112), Expect = e-149
 Identities = 125/347 (36%), Positives = 195/347 (56%), Gaps = 5/347 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCG 110
           L   + GK   ++  V+V ++   + Y A +A +  G+ I               +GV  
Sbjct: 89  LIVEEGGKIQQLAE-VEVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGVTT 147

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
            I+PWNFP  ++A K+APAL TGNTIV+KP+E TP  A+A   ++ E G+P GV N+V G
Sbjct: 148 GILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLG 207

Query: 171 YGDA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
            G+  G  L  +P V  V+ TGS   G+ +   + A N+ +  LELGGK+P I+  DADL
Sbjct: 208 RGETVGQELAGNPKVAMVSMTGSVSAGEKIMATA-AKNITKVCLELGGKAPAIVMDDADL 266

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDL-NVEQG 288
           + AV+        N GQ C    R +VQ  IYD+FV R GE  +    G+P +  ++  G
Sbjct: 267 ELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMG 326

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
           P I+   ++++ + +     +GA++  GG     KG+Y  PT+  +VR +M I  EE FG
Sbjct: 327 PLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEETFG 386

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           PV  ++ F ++E+ I  AN+SDYGL ++++T++L+      +GL+ G
Sbjct: 387 PVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFG 433

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens} Length = 1026

 Score =  438 bits (1129), Expect = e-145
 Identities = 119/355 (33%), Positives = 181/355 (50%), Gaps = 9/355 (2%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG-KTIPINGDFFAYTRHEPVGV 108
           S+ + L+ GK ++ +Y+ DV  ++  L YYA    ++   + +        +  +EP GV
Sbjct: 611 SAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGV 669

Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
              I PWNFPL +     + A+ TGN +V KP+  T +    +  L  EAG+PEGV N  
Sbjct: 670 AAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFT 729

Query: 169 PGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQ-----GSGASNLKRTTLELGGKSPNI 222
           PG G   G  LV HP +  +AFTGS E G  + +       G +N+K+   E+GGK+  I
Sbjct: 730 PGRGSVMGDYLVDHPDISLIAFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAII 789

Query: 223 IFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFD 282
           I  DADLD AV    +  F   GQ C A SR  V D +YD+F+ R    AK   VG   D
Sbjct: 790 IDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYDKFIERLVSMAKATKVGPSED 849

Query: 283 LNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA 342
                G   D + M  I E+ E GK +G  ++        +G++V  T+   ++ + +IA
Sbjct: 850 PANYMGAVADDKAMKSIKEYAEIGKREGH-VLYESPVPAGEGYFVPMTIIGGIKPEHRIA 908

Query: 343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           +EEIFGPV  ++R    ++ IE AN++ + L   +F++  +      +  R G L
Sbjct: 909 QEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNL 963

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis} Length = 485

 Score =  418 bits (1078), Expect = e-144
 Identities = 117/348 (33%), Positives = 185/348 (53%), Gaps = 9/348 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPIN-GDFFAYTRHEPVGVC 109
           +   + G     S   ++E ++  L     +  ++ G   +P +           P+GV 
Sbjct: 89  MIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLGVI 147

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE-AGIPEGVVNIV 168
             I P+NFP+ +    IAPA+A GN++V KP  QT ++   + A   E AG+P GV+N++
Sbjct: 148 SSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVM 207

Query: 169 PGYGDA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA 227
                  G  ++ +P    ++FTGST VG+ + + +     KR  LELGG +P  + +DA
Sbjct: 208 LTDVKEIGDGMLTNPIPRLISFTGSTAVGRHIGEIA-GRAFKRMALELGGNNPFAVLSDA 266

Query: 228 DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQ 287
           D+D AV+ A FG F + GQ C   +R  V   +YDEFV +   R K+   GD  D     
Sbjct: 267 DVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVV 326

Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           GP I++ Q++K LE IE  K+ G +L   G R    G  + P VF    ++ KIA+ E+F
Sbjct: 327 GPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTELF 383

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
            P+  +I+  S +E I+ AN+++YGL++AVFT DL+K       + +G
Sbjct: 384 APIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSG 431

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A* Length = 500

 Score =  416 bits (1073), Expect = e-143
 Identities = 112/351 (31%), Positives = 168/351 (47%), Gaps = 9/351 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCG 110
           L +L+ GK        +V+  +    Y  G +  I G  +P          +  PVG+ G
Sbjct: 104 LVSLEMGKILVEGVG-EVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGLVG 162

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVVN 166
            I  +NFP+ +  W  A A+  GN  + K A  T L ++AV  +IA+      +P  + +
Sbjct: 163 IITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICS 222

Query: 167 IVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFAD 226
           +  G  D G A+ +   V+ ++FTGST+VGK V          R+ LELGG +  I F D
Sbjct: 223 LTCGGADIGTAMAKDERVNLLSFTGSTQVGKQVGLMV-QERFGRSLLELGGNNAIIAFED 281

Query: 227 ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVE 286
           ADL   V  A F      GQ C    R F+ ++I+DE V R  +   +  VG+P+D NV 
Sbjct: 282 ADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVL 341

Query: 287 QGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI 346
            GP   K+ +   L  +E  K +G  +V GG      G YV+PT+   +  D  IA  E 
Sbjct: 342 YGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHTET 401

Query: 347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVT--QGLRAG 395
           F P+  + +F + EEV    N    GL++++FTKDL +       +G   G
Sbjct: 402 FAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCG 452

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C} Length = 497

 Score =  391 bits (1008), Expect = e-133
 Identities = 127/348 (36%), Positives = 185/348 (53%), Gaps = 8/348 (2%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCGQI 112
             + GK  +++   +V+ +   + Y    A  I G  +P  N D   Y    P GV   I
Sbjct: 97  VAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGVVVGI 155

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
             WNFPL +   KI PAL TGNT+VLKP ++TPL    +G +  EAG+P+GV+N++ G G
Sbjct: 156 TAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTG 215

Query: 173 DA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
              G  L + P    +  TGST  GK + + S A  +    LELGGK+P ++  DADLD 
Sbjct: 216 SVVGQTLCESPITKMITMTGSTVAGKQIYKTS-AEYMTPVMLELGGKAPMVVMDDADLDK 274

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           A E A +G F N GQ C    R +V  ++YDEF+A+     K   VGDP D + + GP+ 
Sbjct: 275 AAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKC 334

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGR----AGDKGFYVQPTVFANVRDDMKIAREEIF 347
           ++ ++D I   +     QGA +  GG        + G + +PTV  +V+ D  +  EE F
Sbjct: 335 NQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVHEETF 394

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           GP+  +++ SS+E+ IE  N+S YGL+A V T+     N     L  G
Sbjct: 395 GPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVG 442

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli} Length = 481

 Score =  388 bits (999), Expect = e-132
 Identities = 138/344 (40%), Positives = 201/344 (58%), Gaps = 4/344 (1%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCGQI 112
           TL+ GKP   +   ++ Y+   + ++A    +I+G TIP    D       +P+GV   I
Sbjct: 94  TLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGVTAAI 152

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
            PWNFP  M+  K  PALA G T+VLKPA QTP +ALA+  L   AG+P GV N+V G  
Sbjct: 153 TPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSA 212

Query: 173 DA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
            A G  L  +P V K++FTGSTE+G+ + +   A ++K+ +LELGG +P I+F DADLD 
Sbjct: 213 GAVGNELTSNPLVRKLSFTGSTEIGRQLMEQC-AKDIKKVSLELGGNAPFIVFDDADLDK 271

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           AVEGA    F N GQ C   +R +VQD +YD F  +  +   +  +GD  D  V  GP I
Sbjct: 272 AVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLI 331

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQ 351
           D++ + K+ E I     +GA++V GG      G + QPT+  +V  + K+++EE FGP+ 
Sbjct: 332 DEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETFGPLA 391

Query: 352 QLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
            L RF    +VI +AN++++GLAA  + +DL +   V + L  G
Sbjct: 392 PLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYG 435

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei} Length = 506

 Score =  387 bits (997), Expect = e-131
 Identities = 129/345 (37%), Positives = 195/345 (56%), Gaps = 5/345 (1%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCGQI 112
            +++GKP+  +   +V+Y+     Y A     +   TIP    D      + PVGV G I
Sbjct: 96  CMEHGKPWKEAQG-EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGVTGLI 154

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
           +PWNFP+ M+A K++ ALA G   V+KPA +TPLT +A  +++ +  +P+G+VN+V G  
Sbjct: 155 VPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKA 214

Query: 173 DA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
              G  L +H  V  ++FTGSTEVG+ +   + A  +K+  LELGG +P I+F DADL+A
Sbjct: 215 SVIGKVLCEHKDVPMLSFTGSTEVGRKLIVDT-AEQVKKLALELGGNAPFIVFDDADLEA 273

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           A +      F   GQ C   +R FV + + D F  +  ER  + TVGD  +  ++ GP I
Sbjct: 274 AADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLI 333

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRAGD-KGFYVQPTVFANVRDDMKIAREEIFGPV 350
           +K+  DK+   ++    +GA LVAG   A    G +  PTV   V  +M   +EE FGP+
Sbjct: 334 NKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEETFGPL 393

Query: 351 QQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
             +  F + EEVI+  N++++GLA+ VFT D ++   V  GLR G
Sbjct: 394 VPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFG 438

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q Length = 484

 Score =  386 bits (995), Expect = e-131
 Identities = 134/344 (38%), Positives = 202/344 (58%), Gaps = 4/344 (1%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCGQI 112
           T + GKP   +   ++ Y+   + ++A    ++ G T+P  + +       EP+GVC  I
Sbjct: 97  TTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGVCAAI 155

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
            PWNFP  M+A K+ PALA G  IV+KPAE TP +ALA+  L   AG+P+GV+++V G  
Sbjct: 156 TPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDP 215

Query: 173 DA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
            A G  +  +P V K++FTGST VG+L+   S A  +K+ TLELGG +P I+F DADLDA
Sbjct: 216 KAIGTEITSNPIVRKLSFTGSTAVGRLLMAQS-APTVKKLTLELGGNAPFIVFDDADLDA 274

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           AVEGA    + N GQ C   +R FV + +YD F  +      +  VG   +     GP I
Sbjct: 275 AVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLI 334

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQ 351
           ++  + K+   I    ++GA L+ GG R      + +PTV   V+ DM +A+EE FGP+ 
Sbjct: 335 NEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETFGPLA 394

Query: 352 QLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
            L RF+S EE++  AN++++GLAA ++++D+ +   V + L  G
Sbjct: 395 PLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYG 438

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308} Length = 504

 Score =  386 bits (994), Expect = e-131
 Identities = 140/344 (40%), Positives = 204/344 (59%), Gaps = 6/344 (1%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCGQI 112
           T + GKP   +   +V Y+   + ++A  A +++G TIP            +PVGV   I
Sbjct: 117 TSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGVTAAI 175

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG 172
            PWNFP  M+  K APALA G T++++PA+ TPLTALA+G L  +AGIP GV+ IV G  
Sbjct: 176 TPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKA 235

Query: 173 DA-GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
              GA L  +  V K++FTGSTEVG+L+     A  +KR +LELGG +P I+F DADLDA
Sbjct: 236 REIGAELTSNDTVRKLSFTGSTEVGRLLMAQC-APTIKRISLELGGNAPFIVFDDADLDA 294

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           AV+GA    + N GQ C   +R +VQ  +YD+F  +   + K   VG+  +  V  GP I
Sbjct: 295 AVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMI 354

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQ 351
           +++ + K+   IE   S+GA+L+ GG   G  G + +P +   V  DM +A+EE FGP+ 
Sbjct: 355 EEKAITKVKAHIEDAVSKGAKLITGGKELG--GLFFEPGILTGVTSDMLVAKEETFGPLA 412

Query: 352 QLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
            L  F + EEVI +AN++ +GLAA  +T++  +   V++ L  G
Sbjct: 413 PLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYG 456

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A* Length = 487

 Score =  383 bits (986), Expect = e-130
 Identities = 130/348 (37%), Positives = 199/348 (57%), Gaps = 8/348 (2%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCGQI 112
           T ++GKP   ++  ++ YS   L +++  A +++G  I     D  A    +P+GV   I
Sbjct: 95  TAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGVAAVI 153

Query: 113 IPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG-Y 171
            PWNFP  M+  K+  ALA G T+V+KPAE TP +ALA+  L ++AGIP GV N++P   
Sbjct: 154 TPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSR 213

Query: 172 GDA---GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
            +A   G A+   P V K++FTGST  GK++   + A+++KR ++ELGG +P I+F  A+
Sbjct: 214 KNAKEVGEAICTDPLVSKISFTGSTTTGKILLHHA-ANSVKRVSMELGGLAPFIVFDSAN 272

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRR-TVGDPFDLNVEQ 287
           +D AV GA    F N GQ C   ++  VQ  I+D FV    E  K+   VG+ F+    Q
Sbjct: 273 VDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQ 332

Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           GP I+++ ++K+ + +    S+GA +V GG R      + +PT+  NV  DM    EE F
Sbjct: 333 GPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPTLLCNVTQDMLCTHEETF 392

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           GP+  +I+F + EE I  AN +D GLA   +++D  +   V + L  G
Sbjct: 393 GPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVG 440

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A Length = 462

 Score =  381 bits (981), Expect = e-129
 Identities = 107/342 (31%), Positives = 164/342 (47%), Gaps = 2/342 (0%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQII 113
           T + GKP   + + +V  S     +YA     +      +  +  A   + P+GV   I+
Sbjct: 76  TREMGKPIKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVILAIM 134

Query: 114 PWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGD 173
           PWNFPL  +     P L  GN+ +LK A      A  +  ++AEAG P GV   V    +
Sbjct: 135 PWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNE 194

Query: 174 AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAV 233
             + ++  P +  V  TGS   G  +   +GA  LK+  LELGG  P I+  DADL+ AV
Sbjct: 195 GVSQMINDPRIAAVTVTGSVRAGAAIGAQAGA-ALKKCVLELGGSDPFIVLNDADLELAV 253

Query: 234 EGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDK 293
           + A  G + N GQ C A  R  V++ I   F  R    A    +GDP     + GP    
Sbjct: 254 KAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARF 313

Query: 294 EQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQL 353
           +  D++ + +++  ++GA+L+ GG +   +G Y   TV A+V  DM   R+E+FGPV  +
Sbjct: 314 DLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGPVAAI 373

Query: 354 IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
                    +  AN+S++GL+A +FT D      +   L  G
Sbjct: 374 TVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECG 415

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus} Length = 484

 Score =  382 bits (983), Expect = e-129
 Identities = 97/342 (28%), Positives = 155/342 (45%), Gaps = 2/342 (0%)

Query: 54  TLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQII 113
           TL+ GK  + S   +VE  +    YYA    ++   T   +    AY   +  GV     
Sbjct: 73  TLEMGKLLSESKE-EVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVIMACE 131

Query: 114 PWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGD 173
           PWNFPL  +    AP    GN I+LK A   P +A     +I  AG PEG +  +    D
Sbjct: 132 PWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYD 191

Query: 174 AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAV 233
             A ++  P +  VA TGS   G  V + +G  NLK++T+ELGG    I+  DAD     
Sbjct: 192 QLADIIADPRIQGVALTGSERGGSAVAEAAGK-NLKKSTMELGGNDAFIVLDDADPQVLR 250

Query: 234 EGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDK 293
              +    +N GQ C +  R  V+ + YDE +            GDP + +    P   +
Sbjct: 251 NVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSE 310

Query: 294 EQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQL 353
           +  +K+   ++     GA++         KG + +PT+  ++  D  +  +E+FGP+ ++
Sbjct: 311 KAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFGPIAEV 370

Query: 354 IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
                    I+ AN+S YGL ++V   D+D+   V+  +  G
Sbjct: 371 FVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETG 412

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A* Length = 510

 Score =  344 bits (885), Expect = e-114
 Identities = 68/375 (18%), Positives = 117/375 (31%), Gaps = 43/375 (11%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN---------GDFFAYTR 102
              L+   P     + ++  +   LR +A   +        ++                +
Sbjct: 75  RAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQ 133

Query: 103 HEPVGVCGQIIPWNFPLLMLA--WKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA-- 158
              +G        NFPL   A     A ALA G  +++K     P T+  V   I +A  
Sbjct: 134 QIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALK 193

Query: 159 --GIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTT--L 213
              +P+ +  ++ G     G ALV HP +  V FTGS   G+ +         +      
Sbjct: 194 QEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFN-LAHERPEPIPFYG 252

Query: 214 ELGGKSPNIIFADADLDAA--VEGAHFGLFFNMGQCCCAGSRTFV-QDTIYDEFVARSGE 270
           ELG  +P  IF  A    A   +     +    GQ C      F         F+  +  
Sbjct: 253 ELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQS 312

Query: 271 RAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPT 330
                        +    P I      ++   +  G   G  +             V   
Sbjct: 313 L------IRQQSPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVASA 359

Query: 331 VF---ANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNY 387
           +F   +          EEIFGP   ++   ++ +++  +      L A +   + D    
Sbjct: 360 LFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQV 419

Query: 388 --VTQGL--RAGTLI 398
             +   L   AG L+
Sbjct: 420 SQLIPRLEEIAGRLV 434

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus} Length = 452

 Score =  335 bits (861), Expect = e-112
 Identities = 63/359 (17%), Positives = 122/359 (33%), Gaps = 26/359 (7%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
               ++G        +   ++  +   Y  + D+     +  + +    T  EPVG+   
Sbjct: 52  QAVEESGMGIVEDKVIKNHFA--SEFIYNKYKDEQTCGILEEDDNLGTMTIAEPVGIICG 109

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVVNI 167
           I+P   P     +K   +L T N I+  P  +   +      L+ +A    G P+ ++  
Sbjct: 110 IVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGW 169

Query: 168 VPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFAD 226
           +     +   AL++H  +  +  TG   + K     +  S+ K       G  P +I   
Sbjct: 170 IDQPSVELSNALMKHDDIALILATGGPGMVK-----AAYSSGKPAIGVGAGNVPVVIDET 224

Query: 227 ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVE 286
           AD+  AV        F+ G  C +     V D +YDE   R              D  V 
Sbjct: 225 ADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVYDEVKERFASHKAHVLSKTDADK-VR 283

Query: 287 QGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI 346
           +   ID     KI+    +  ++ A     G +       +       V  D   A E+ 
Sbjct: 284 KVLLIDGALNAKIVGQPATAIAEMA-----GVKVPADTKVLIGEGLGKVSYDDAFAHEK- 337

Query: 347 FGPVQQLIRFSSIEEVIERA----NNSDYGLAAAVFTKDLDKTNYVTQ---GLRAGTLI 398
             P   + R  + E+ + +A         G  + ++T      + +      ++   ++
Sbjct: 338 LSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARIL 396

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110} Length = 1001

 Score =  340 bits (875), Expect = e-108
 Identities = 105/354 (29%), Positives = 163/354 (46%), Gaps = 12/354 (3%)

Query: 50  SSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPING--DFFAYTRHEPVG 107
            +L   + GK  + + S ++  +    RYYA    K+ G    + G             G
Sbjct: 593 IALLQREGGKTLDDALS-ELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRG 651

Query: 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNI 167
           V   I PWNFPL +   ++  AL  GN++V KPAEQTP  A    AL+ EAGIP+  + +
Sbjct: 652 VFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYL 711

Query: 168 VPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASN--LKRTTLELGGKSPNIIFA 225
           V G G  GAAL  HP +  V FTGSTEV + + +   A +  +     E GG +  I  A
Sbjct: 712 VTGDGRIGAALTAHPDIAGVVFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADA 771

Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
            A  +   +      F + GQ C A    FVQ+ + D  +      A+   +GDP D+  
Sbjct: 772 TALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMIEMVAGAARELKIGDPSDVAT 831

Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 345
             GP ID E   ++   I   K++  +L   G     +G +V P +F     +     EE
Sbjct: 832 HVGPVIDVEAKQRLDAHIARMKTEA-RLHFAG--PAPEGCFVAPHIFELT--EAGQLTEE 886

Query: 346 IFGPVQQLIRF--SSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           +FGP+  ++R+   ++E V+     + YGL   V ++  D    +   ++ G +
Sbjct: 887 VFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNI 940

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti} Length = 528

 Score =  289 bits (742), Expect = 6e-93
 Identities = 75/356 (21%), Positives = 117/356 (32%), Gaps = 37/356 (10%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAG------FADKIHGKTIPI---NGDFFAYTR 102
           + + + G P     + +   +   LR +A       + D+     +P             
Sbjct: 108 IGSQETGLPEARL-NGERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIRLV 166

Query: 103 HEPVGVCGQIIPWNFPLLM--LAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA-- 158
             PVG        NFPL         A ALA G  +V+K     P T   V   +  A  
Sbjct: 167 QRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIR 226

Query: 159 --GIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGSTEVGK-LVQQGSGASNLKRTTLE 214
             G+  GV +++ G   D G ALVQHP +  V FTGS   G+ L    +          E
Sbjct: 227 KTGVHPGVFSLIQGGSRDVGHALVQHPHIKAVGFTGSLAGGRALFDLCAARPEPIPFFGE 286

Query: 215 LGGKSPNIIFADADLDAA---VEGAHFGLFFNMGQCCCAGSRTFVQDTI-YDEFVARSGE 270
           LG  +P  +  +A    A    +G    L    GQ C       V +    D F   + E
Sbjct: 287 LGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFCTNPGIAVVIEGADADRFTTAAVE 346

Query: 271 RAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPT 330
              +          + +  +  + +                + +     +G       P 
Sbjct: 347 ALAKVAPQTMLTDGIAKAYRDGQARF---------ATRNAVKPLLATESSG---RDASPN 394

Query: 331 VFANVRDDM---KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLD 383
           +F              EE+FGP+  ++R  S  E+ E A      L A +     D
Sbjct: 395 LFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGD 450

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis} Length = 486

 Score =  272 bits (698), Expect = 7e-87
 Identities = 107/286 (37%), Positives = 164/286 (57%), Gaps = 8/286 (2%)

Query: 100 YTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG 159
                P+GV G I P+NFP+++  W    A+A GNT +LKP+E+TPL    +  L  +AG
Sbjct: 136 ANYRYPIGVVGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAG 195

Query: 160 IPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKS 219
           +P+GV N+V G  D    +++HP +  ++F GS  VG+ V +  G+ NLKR     G K+
Sbjct: 196 LPKGVFNVVYGAHDVVNGILEHPEIKAISFVGSKPVGEYVYK-KGSENLKRVQSLTGAKN 254

Query: 220 PNIIFADADLDAAVE---GAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRT 276
             I+  DA+L+  V    GA FG   + G+ C A +   V++ I DEF+A+  E+     
Sbjct: 255 HTIVLNDANLEDTVTNIVGAAFG---SAGERCMACAVVTVEEGIADEFMAKLQEKVADIK 311

Query: 277 VGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGG-GRAGDKGFYVQPTVFANV 335
           +G+  D  V  GP I ++   + L +IE G  +GA+LV  G     D G++V PT+F NV
Sbjct: 312 IGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNV 371

Query: 336 RDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKD 381
             +M I ++EIF PV  +IR  +++E IE AN S++   A +FT +
Sbjct: 372 TTEMTIWKDEIFAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSN 417

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti} Length = 521

 Score =  266 bits (683), Expect = 3e-84
 Identities = 98/290 (33%), Positives = 152/290 (52%), Gaps = 12/290 (4%)

Query: 100 YTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG 159
           Y+  +PVG+   I P+NFP ++  W  APA+A GN  +LKP+E+ P   + +  L+ EAG
Sbjct: 157 YSIRQPVGIGAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAG 216

Query: 160 IPEGVVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKS 219
           +P G++N+V G   A  A++ HP +  V+F GST + + V   + A N KR     G K+
Sbjct: 217 LPAGILNVVNGDKGAVDAILTHPDIAAVSFVGSTPIARYVYG-TAAMNGKRAQCFGGAKN 275

Query: 220 PNIIFADADLDAAVE---GAHFGLFFNMGQCCCAGSRT-FVQDTIYDEFVARSGERAKRR 275
             II  DADLD A     GA +G   + G+ C A S    V +   +  + +     +  
Sbjct: 276 HMIIMPDADLDQAANALIGAGYG---SAGERCMAISVAVPVGEETANRLIDKLVPMVESL 332

Query: 276 TVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGG----GRAGDKGFYVQPTV 331
            +G   D   + GP + KE   +I   I+SG  QGA+LV  G     +  + G ++   +
Sbjct: 333 RIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCL 392

Query: 332 FANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKD 381
           F +V  DM I + EIFGPV  ++R  + EE +      +YG   A++T+D
Sbjct: 393 FDDVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRD 442

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes} Length = 464

 Score =  255 bits (654), Expect = 1e-80
 Identities = 52/365 (14%), Positives = 110/365 (30%), Gaps = 41/365 (11%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGVCG 110
           +   + G      +   V  ++   ++   +   +    +   + +        P+GV  
Sbjct: 57  MAHEETGFG---IWQDKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKVMEVAVPLGVVA 113

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE----AGIPEGVVN 166
            +IP   P   + +K   ++  GN+IV  P        L    +I+E    AG P+G ++
Sbjct: 114 GLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAIS 173

Query: 167 IVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
            +          L++H     +  TG + + K        S+         G  P  I  
Sbjct: 174 CMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAA-----YSSGTPAIGVGPGNGPAFIER 228

Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGD------ 279
            A++  AV+       F+ G  C +     V+    +  +A   ++              
Sbjct: 229 SANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGAHFLSDAEAVQLG 288

Query: 280 --PFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRD 337
                 N    P I  + +  I           A+++                    V  
Sbjct: 289 KFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------KVGA 334

Query: 338 DMKIAREEIFGPVQQLIRFSSIEEVIERANNSDY----GLAAAVFTKDLDKTNYVTQGLR 393
            +  +  E   P+       + +E  E + +  Y    G    + ++D +          
Sbjct: 335 KIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKP 393

Query: 394 AGTLI 398
              L+
Sbjct: 394 VSRLL 398

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A Length = 563

 Score =  258 bits (661), Expect = 1e-80
 Identities = 93/332 (28%), Positives = 145/332 (43%), Gaps = 17/332 (5%)

Query: 76  LRYYAGFADKI-HGKTIPINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGN 134
            R+ A FA ++   + I +             G    I P+NF  +      APAL  GN
Sbjct: 170 FRFNAKFAVELEGEQPISVPPSTNHTVYRGLEGFVAAISPFNFTAIGGNLAGAPALM-GN 228

Query: 135 TIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAFTGST 193
            ++ KP++   L + AV  ++ EAG+P  ++  VP  G   G  +     +  + FTGS 
Sbjct: 229 VVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSSEHLCGINFTGSV 288

Query: 194 EVGKLVQQGSGAS-----NLKRTTLELGGKSPNIIFAD--ADLDAAVEGAHFGLFFNMGQ 246
              K + +    +        R   E GGK  N  F    AD+D+ V G     F   GQ
Sbjct: 289 PTFKHLWRQVAQNLDRFRTFPRLAGECGGK--NFHFVHSSADVDSVVSGTLRSAFEYGGQ 346

Query: 247 CCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPF-DLNVEQGPQIDKEQMDKILEFIES 305
            C A SR +V  +++ +   R  E   R  VGDP  D        ID +   +I +++E 
Sbjct: 347 KCSACSRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEH 406

Query: 306 GKSQG-AQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRF--SSIEEV 362
            +S     ++AGG      G+YV+P +  +      I +EEIFGPV  +  +      E 
Sbjct: 407 ARSSPSLSILAGGQCNESVGYYVEPCIIESKDPQEPIMKEEIFGPVLTVYVYPDDKYRET 466

Query: 363 IERANN-SDYGLAAAVFTKDLDKTNYVTQGLR 393
           ++  ++ + YGL  AVF +D       T+ LR
Sbjct: 467 LKLVDSTTSYGLTGAVFAQDKAIVQEATRMLR 498

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} PDB: 3szb_A* 1ad3_A* Length = 469

 Score =  214 bits (547), Expect = 1e-64
 Identities = 93/347 (26%), Positives = 151/347 (43%), Gaps = 20/347 (5%)

Query: 56  DNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG----KTIPINGDFF---AYTRHEPVGV 108
           D  K    +Y  +V Y L  + Y      K+      + +           Y   EP+GV
Sbjct: 67  DLHKNEWNAYYEEVVYVLEEIEY---MIQKLPEWAADEPVEKTPQTQQDELYIHSEPLGV 123

Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
              I  WN+P  +    +  A+A GN +VLKP+E +   A  +  +I +  + + +  ++
Sbjct: 124 VLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVI 182

Query: 169 PGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
            G       L++    D + +TGST VGK++   + A +L   TLELGGKSP  +  + D
Sbjct: 183 NGGVPETTELLKER-FDHILYTGSTGVGKIIMTAA-AKHLTPVTLELGGKSPCYVDKNCD 240

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD A     +G F N GQ C A        +I ++ V +  +  K     D    + + G
Sbjct: 241 LDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKK-SRDYG 299

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             I      +++  IE  K      VA GG       Y+ PT+  +V     + +EEIFG
Sbjct: 300 RIISARHFQRVMGLIEGQK------VAYGGTGDAATRYIAPTILTDVDPQSPVMQEEIFG 353

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAG 395
           PV  ++   S+EE I+  N  +  LA  +F+ +      +     +G
Sbjct: 354 PVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSG 400

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A* Length = 457

 Score =  200 bits (510), Expect = 1e-59
 Identities = 97/348 (27%), Positives = 156/348 (44%), Gaps = 23/348 (6%)

Query: 56  DNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG----KTIPINGDFF---AYTRHEPVGV 108
           D GKP ++    ++   L  + +       +       ++P          Y   EP GV
Sbjct: 77  DLGKPKDVVDLAEIGAVLHEIDF---ALAHLDEWVAPVSVPSPDIIAPSECYVVQEPYGV 133

Query: 109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIV 168
              I P+N+P+ +    +  A+  GNT ++KP+E TP T+  +  +IAEA      V ++
Sbjct: 134 TYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVI 192

Query: 169 PGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADAD 228
            G  D  + L+  P  D + FTGS  VGK+V Q + A +L    LELGGK P I+  DAD
Sbjct: 193 QGGRDENSHLLSLP-FDFIFFTGSPNVGKVVMQ-AAAKHLTPVVLELGGKCPLIVLPDAD 250

Query: 229 LDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQG 288
           LD  V    FG F N GQ   A    +V  ++ D  +           V          G
Sbjct: 251 LDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALLE-----RLVERVKTELPEINSTG 305

Query: 289 PQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
             + + Q+ +++  +E+ + Q    V  G +A      +  TV   V  +  +  EE+FG
Sbjct: 306 KLVTERQVQRLVSLLEATQGQ----VLVGSQADVSKRALSATVVDGVEWNDPLMSEELFG 361

Query: 349 PVQQLIRFSSIEEVIERANNS-DYGLAAAVFTKDLDKTNYVTQGLRAG 395
           P+  ++ F S+   I++ N      LA  VF KD+D    +   +++G
Sbjct: 362 PILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSG 409

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.2 bits (106), Expect = 4e-05
 Identities = 62/467 (13%), Positives = 136/467 (29%), Gaps = 131/467 (28%)

Query: 1   MLRLRNLALKSSTLGSLKNYSAAAVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKP 60
           +  L+ L  +     + ++  ++ +   I   + E  +L  +  + N    L  L     
Sbjct: 199 LEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYEN---CLLVLL---- 251

Query: 61  YNMSYSVDVEYS------------LRTLRYYAGFADKIHGKT---IPINGDFFAYTRHEP 105
                  +V+ +            L T R +    D +   T   I ++      T  E 
Sbjct: 252 -------NVQNAKAWNAFNLSCKILLTTR-FKQVTDFLSAATTTHISLDHHSMTLTPDEV 303

Query: 106 VGVCGQIIPWNFPLLMLAWKIAPALA-TGNTIVLKPAEQTPLTALAVGALIAEAGIPEGV 164
             +  + +  +     L     P    T N          P   L   ++IAE+ I +G 
Sbjct: 304 KSLLLKYL--DCRPQDL-----PREVLTTN----------PR-RL---SIIAES-IRDG- 340

Query: 165 VNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIF 224
           +     +        +H   DK+     + +  L       +  ++    L       +F
Sbjct: 341 LATWDNW--------KHVNCDKLTTIIESSLNVL-----EPAEYRKMFDRLS------VF 381

Query: 225 -ADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS--GERAKRRTVGDPF 281
              A +   +      L +                 + ++    S   ++ K  T+  P 
Sbjct: 382 PPSAHIPTIL----LSLIWF-------DVIKSDVMVVVNKLHKYSLVEKQPKESTISIP- 429

Query: 282 DLNVEQGPQIDKEQM--DKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDD- 338
            + +E   +++ E      I++     K+                 +    +     D  
Sbjct: 430 SIYLELKVKLENEYALHRSIVDHYNIPKT-----------------FDSDDLIPPYLDQY 472

Query: 339 ---------MKIAREEIFGPVQQL---IRFSSIEEVIERANNSDYGLAAAVFT-KDLDK- 384
                      I   E     + +    RF  +E+ I   + +     + + T + L   
Sbjct: 473 FYSHIGHHLKNIEHPERMTLFRMVFLDFRF--LEQKIRHDSTAWNASGSILNTLQQLKFY 530

Query: 385 TNYVTQG-----LRAGTLIRFS-SIEEVIERANNSDYGLAAAVFTKD 425
             Y+             ++ F   IEE +  +  +D  L  A+  +D
Sbjct: 531 KPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDL-LRIALMAED 576

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	442
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	100.0
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	100.0
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	100.0
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	100.0
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	100.0
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	100.0
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	100.0
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	100.0
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	100.0
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	100.0
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	100.0
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	100.0
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	100.0
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	100.0
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	100.0
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	100.0
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	100.0
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	100.0
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	100.0
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	100.0
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	100.0
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	100.0
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	100.0
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	100.0
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	100.0
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	100.0
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	100.0
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	100.0
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	100.0
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	100.0
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	100.0
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	100.0
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	100.0
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	100.0
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	100.0
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	100.0
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	100.0
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	100.0
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	100.0
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	100.0
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	100.0
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	100.0
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	100.0
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	100.0
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	100.0
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	100.0
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	100.0
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	100.0
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	100.0
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	100.0
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	100.0
2wme_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	99.26
4h7n_A	474	Aldehyde dehydrogenase; structural genomics, PSI-b	99.15
3rh9_A	506	Succinate-semialdehyde dehydrogenase (NAD(P)(+));	99.14
3ifg_A	484	Succinate-semialdehyde dehydrogenase (NADP+); niai	99.14
3ek1_A	504	Aldehyde dehydrogenase; ssgcid, oxidoreductase, st	99.13
3ros_A	484	NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-	99.13
3i44_A	497	Aldehyde dehydrogenase; oxidoreductase, structural	99.12
3ed6_A	520	Betaine aldehyde dehydrogenase; structural genomic	99.12
3jz4_A	481	Succinate-semialdehyde dehydrogenase [NADP+]; tetr	99.11
3iwj_A	503	Putative aminoaldehyde dehydrogenase; rossmann fol	99.11
3prl_A	505	NADP-dependent glyceraldehyde-3-phosphate dehydro;	99.11
3sza_A	469	Aldehyde dehydrogenase, dimeric NADP-preferring; A	99.1
3u4j_A	528	NAD-dependent aldehyde dehydrogenase; PSI-biology,	99.09
2o2p_A	517	Formyltetrahydrofolate dehydrogenase; aldehyde deh	99.09
1o04_A	500	Aldehyde dehydrogenase, mitochondrial precursor; A	99.07
3qan_A	538	1-pyrroline-5-carboxylate dehydrogenase 1; proline	99.07
2ve5_A	490	BADH, betaine aldehyde dehydrogenase; aldehyde oxi	99.07
3k2w_A	497	Betaine-aldehyde dehydrogenase; structural genomic	99.07
4e4g_A	521	Methylmalonate-semialdehyde dehydrogenase; structu	99.06
1a4s_A	503	ALDH, betaine aldehyde dehydrogenase; oxidoreducta	99.06
3lns_A	457	Benzaldehyde dehydrogenase; oxidoreductase, NADP+,	99.06
4dng_A	485	Uncharacterized aldehyde dehydrogenase ALDY; struc	99.05
3r31_A	517	BADH, betaine aldehyde dehydrogenase; structural g	99.05
1bxs_A	501	Aldehyde dehydrogenase; retinal, class 1, tetramer	99.05
4f3x_A	498	Putative aldehyde dehydrogenase; structural genomi	99.05
3b4w_A	495	Aldehyde dehydrogenase; RV0223C-NAD complex, struc	99.04
3r64_A	508	NAD dependent benzaldehyde dehydrogenase; structur	99.04
1uzb_A	516	1-pyrroline-5-carboxylate dehydrogenase; oxidoredu	99.03
3pqa_A	486	Lactaldehyde dehydrogenase; structural genomics, p	99.03
2w8n_A	487	Succinate-semialdehyde dehydrogenase, mitochondria	99.03
2j6l_A	500	Aldehyde dehydrogenase family 7 member A1; NAD, re	99.02
2imp_A	479	Lactaldehyde dehydrogenase; protein-lactate-NADH t	99.02
3ty7_A	478	Putative aldehyde dehydrogenase SAV2122; structura	99.02
1wnd_A	495	Putative betaine aldehyde dehydrogenase; NADH, flu	99.02
3etf_A	462	Putative succinate-semialdehyde dehydrogenase; cen	99.02
1uxt_A	501	Glyceraldehyde-3-phosphate dehydrogenase (NADP+);	99.01
2d4e_A	515	5-carboxymethyl-2-hydroxymuconate semialdehyde deh	99.01
1euh_A	475	NADP dependent non phosphorylating glyceraldehyde-	98.99
3ju8_A	490	Succinylglutamic semialdehyde dehydrogenase; alpha	98.93
4e3x_A	563	Delta-1-pyrroline-5-carboxylate dehydrogenase, mit	98.92
4f9i_A	1026	Proline dehydrogenase/delta-1-pyrroline-5-carboxy	98.91
2y53_A	534	Aldehyde dehydrogenase (BOX pathway); oxidoreducta	98.9
1t90_A	486	MMSDH, probable methylmalonate-semialdehyde dehydr	98.89
1ez0_A	510	ALDH, aldehyde dehydrogenase; nucleotide binding d	98.72
3haz_A	1001	Proline dehydrogenase; proline utilization A, PUTA	98.71
3v4c_A	528	Aldehyde dehydrogenase (NADP+); structural genomic	98.59
1vlu_A	468	Gamma-glutamyl phosphate reductase; YOR323C, struc	98.49
4ghk_A	444	Gamma-glutamyl phosphate reductase; structural gen	98.44
3k9d_A	464	LMO1179 protein, aldehyde dehydrogenase; structura	98.35
3my7_A	452	Alcohol dehydrogenase/acetaldehyde dehydrogenase;	98.18
1o20_A	427	Gamma-glutamyl phosphate reductase; TM0293, struct	98.18
2h5g_A	463	Delta 1-pyrroline-5-carboxylate synthetase; dehydr	98.01
1kae_A	434	HDH, histidinol dehydrogenase; L-histidinol dehydr	92.61
4gic_A	423	HDH, histidinol dehydrogenase; protein structure i	92.08

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=100.00  E-value=4.3e-79  Score=625.62  Aligned_cols=374  Identities=44%  Similarity=0.742  Sum_probs=350.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      +|..+++.......+.++.+++++++|+|||+.+++..|+..+++.++|++.+++++.++..+...+...+++++|+|||
T Consensus        67 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  146 (490)
T 2wme_A           67 QRSRILRRAVDILRERNDELAALETLDTGKPLAETRSVDIVTGADVLEYYAGLVPAIEGEQIPLRETSFVYTRREPLGVV  146 (490)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHTTTHHHHHHHHHHHHHHHGGGCCEEEEEEETTEEEEEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHhccccccCccccccCCcceeEEecceeEE
Confidence            45555555555555667788999999999999999875799999999999999988877666655677789999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|++ ++++.|+.||+++.|.
T Consensus       147 ~~I~PwNfP~~~~~~~~a~ALaaGNtVVlKPse~tp~ta~~l~~l~~eaGlP~gv~~vv~g~g~~~g~~L~~~p~v~~I~  226 (490)
T 2wme_A          147 AGIGAWNYPVQIALWKSAPALAAGNAMIFKPSEVTPLTALKLAEIYTEAGVPDGVFNVLTGSGREVGQWLTEHPLIEKIS  226 (490)
T ss_dssp             EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTCCEEE
T ss_pred             EEeccccCcchhhhhhHHHHHHcCCeEEEECCcCCHHHHHHHHHHHHHhCCCCCcEEEEeCChHHHHHHHHhCCCCCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999987 8999999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.+.+.++.+++||+++|||||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       227 FTGS~~~G~~i~~~~a~~~lk~v~lELGGk~p~iV~~dAdl~~A~~~~~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~l  306 (490)
T 2wme_A          227 FTGGTSTGKKVMASASSSSLKEVTMELGGKSPLIIFPDADLDRAADIAVMANFFSSGQVCTNGTRVFIHRSQQARFEAKV  306 (490)
T ss_dssp             EESCHHHHHHHHHHHHHHHCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHHH
T ss_pred             EECChHHHHHHHHhhhccCCceEEEEcCCcCeEEEccCccHHHHHHHHHHHHhccCCCcCCCceeeccchhHHHHHHHHH
Confidence            99999999988765543688999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHHH
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++++++++|||.|+++++||+++..+++++.++|++++.+|+++++||.+..    ..|+|++|||+.+++++|.++++
T Consensus       307 ~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~G~~~~Ptvl~~v~~~~~i~~e  386 (490)
T 2wme_A          307 LERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFGKGAYVAPTVFTDCRDDMTIVRE  386 (490)
T ss_dssp             HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGGGTTCBCCEEEESCCTTSHHHHS
T ss_pred             HHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCcccccCCCccCCEEEEcCCCCChhhhc
Confidence            99999999999999999999999999999999999999999999999998643    36899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |+||||++++.|++++|+|+++|+++|||+++|||+|.+++.++++++++|.|+||+..
T Consensus       387 EiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~  445 (490)
T 2wme_A          387 EIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICWINTWG  445 (490)
T ss_dssp             CCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCS
T ss_pred             cccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEEEeCCC
Confidence            99999999999999999999999999999999999999999999999999999999764

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=100.00  E-value=5.4e-77  Score=612.88  Aligned_cols=373  Identities=35%  Similarity=0.579  Sum_probs=348.5

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEe-eccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRH-EPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+.+.+...++.+ +|+||
T Consensus        72 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  150 (506)
T 3rh9_A           72 TRRKWLEDIRDGLKENREEIGRILCMEHGKPWKEAQG-EVDYAAGFFDYCAKHISALDSHTIPEKPKDCTWTVHYRPVGV  150 (506)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGGCCEECSCCGGGCEEEEEEEECCS
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCceeeEeecccceE
Confidence            3444444444444556777899999999999999997 999999999999999988766654433456678889 99999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++.|+.||++|.|
T Consensus       151 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I  230 (506)
T 3rh9_A          151 TGLIVPWNFPIGMIAKKLSAALAAGCPSVIKPASETPLTMIAFFSVMDKLDLPDGMVNLVMGKASVIGKVLCEHKDVPML  230 (506)
T ss_dssp             EEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHTTTTCCTTSEEECCSCHHHHHHHHHHCTTCCEE
T ss_pred             EEEECCCchHHHHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHhCcChhhEEEEeCCChHHHHHHHhCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999977 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      +||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       231 ~FTGS~~vG~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~  309 (506)
T 3rh9_A          231 SFTGSTEVGRKLIVDTA-EQVKKLALELGGNAPFIVFDDADLEAAADNLIANKFRGGGQTCVCANRIFVHEKVADAFGQK  309 (506)
T ss_dssp             EEESCHHHHHHHHHHTT-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSSSSCCEEEEETTTHHHHHHH
T ss_pred             EEECCHHHHHHHHHHhh-hcCCceEEecCCCCceEECCCCCHHHHHHHHHHHHHHhCCCCcccCcEEEEcHHHHHHHHHH
Confidence            99999999999999988 68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCC-CCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD-KGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||...+. .|+|++|||+.++.+++.++++|+
T Consensus       310 l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi  389 (506)
T 3rh9_A          310 LAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPPTVVQGVDREMCCYQEET  389 (506)
T ss_dssp             HHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCCEEEECCCTTSHHHHSCC
T ss_pred             HHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECCeEEccCCCCChhhcccc
Confidence            9999999999999999999999999999999999999999999999999976444 789999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       390 FGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~~  447 (506)
T 3rh9_A          390 FGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVGWNTGTG  447 (506)
T ss_dssp             CSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEEESCCCC
T ss_pred             cCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEEEcCCCC
Confidence            9999999999999999999999999999999999999999999999999999999763

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=100.00  E-value=3.5e-77  Score=616.18  Aligned_cols=373  Identities=42%  Similarity=0.682  Sum_probs=349.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .|..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++.++++..+...+.. .+...++.++|+||
T Consensus        95 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  173 (520)
T 3ed6_A           95 TRGKKVRAIADKIKEHREALARLETLDTGKTLEESYA-DMDDIHNVFMYFAGLADKDGGEMIDSPIPDTESKIVKEPVGV  173 (520)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHTTSCCEEEECCSSTTEEEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeecccCCCCCcccccccCccE
Confidence            3444555554444556778899999999999999998 999999999999999887766555443 46678999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus       174 V~~I~PwN~P~~~~~~~~apALaaGNtVVlKPs~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~~p~vd~V  253 (520)
T 3ed6_A          174 VTQITPWNYPLLQASWKIAPALATGCSLVMKPSEITPLTTIRVFELMEEVGFPKGTINLILGAGSEVGDVMSGHKEVDLV  253 (520)
T ss_dssp             EEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHCCCTTSEEECCSCCTTHHHHHHHCTTCSEE
T ss_pred             EEEECCCccHHHHHHHHHHHHHHcCCEEEEEcCCcchHHHHHHHHHHHHhCCCCCeEEEEeCCChHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999976 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       254 ~FTGS~~vG~~i~~~aa-~~l~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~  332 (520)
T 3ed6_A          254 SFTGGIETGKHIMKNAA-NNVTNIALELGGKNPNIIFDDADFELAVDQALNGGYFHAGQVCSAGSRILVQNSIKDKFEQA  332 (520)
T ss_dssp             EEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGTSTTCCCEEEEEHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHHHhh-hcCCCEEEEcCCCCeeEECCCCCHHHHHHHHHHHHHhcCCCCcccCceEEEcHHHHHHHHHH
Confidence            99999999999999988 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC----CCCcccccceeccCcchhHHHH
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG----DKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~----~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||....    ..|+|++|||+.+++++|.+++
T Consensus       333 l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~f~~PTvl~~v~~~~~i~~  412 (520)
T 3ed6_A          333 LIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGLFFEPTVITNCDTSMRIVQ  412 (520)
T ss_dssp             HHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTTCCCCEEEESCCTTSHHHH
T ss_pred             HHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCceECCeEEecCCCCCcccc
Confidence            999999999999999999999999999999999999999999999999997642    4789999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +|+||||++++.|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||+...
T Consensus       413 eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~~~~  473 (520)
T 3ed6_A          413 EEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVWINDFHP  473 (520)
T ss_dssp             SCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESCSCC
T ss_pred             CceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999999998754

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=100.00  E-value=5.2e-77  Score=610.96  Aligned_cols=372  Identities=36%  Similarity=0.618  Sum_probs=348.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .|..+++.......+.++.+++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. .+...+++++|+||
T Consensus        73 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  151 (484)
T 3ifg_A           73 ERAAILRRWFDLVIANSDDLALILTTEQGKPLAEAKG-EIAYAASFIEWFAEEGKRVAGDTLPTPDANKRIVVVKEPIGV  151 (484)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECSS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCceeEEEecCCcE
Confidence            3444555554444555777899999999999999998 999999999999998877766554443 46678999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus       152 v~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~p~v~~v  231 (484)
T 3ifg_A          152 CAAITPWNFPAAMIARKVGPALAAGCPIVVKPAESTPFSALAMAFLAERAGVPKGVLSVVIGDPKAIGTEITSNPIVRKL  231 (484)
T ss_dssp             EEEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCHHHHHHHHHHCTTCCEE
T ss_pred             EEEECCCcChHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999977 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       232 ~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~  310 (484)
T 3ifg_A          232 SFTGSTAVGRLLMAQSA-PTVKKLTLELGGNAPFIVFDDADLDAAVEGAIASKYRNNGQTCVCTNRFFVHERVYDAFADK  310 (484)
T ss_dssp             EEESCHHHHHHHHHHTG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEGGGHHHHHHH
T ss_pred             EEECCHHHHHHHHHHhh-ccCCceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCcccCCCeEEEcHHHHHHHHHH
Confidence            99999999999999988 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      |.++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||...+..|+|++|||+.++.++|.++++|+|
T Consensus       311 l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiF  390 (484)
T 3ifg_A          311 LAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFFEPTVLTGVKPDMDVAKEETF  390 (484)
T ss_dssp             HHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEEEECTTSGGGTSCCC
T ss_pred             HHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceEcCEEEecCCCCChhhCCeee
Confidence            99999999999999999999999999999999999999999999999999875557999999999999999999999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |||++++.|++++|+|+++|+++|||+++|||+|.+++.++++++++|.|+||+..
T Consensus       391 GPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~  446 (484)
T 3ifg_A          391 GPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVGINTGL  446 (484)
T ss_dssp             SSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC
T ss_pred             CcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCC
Confidence            99999999999999999999999999999999999999999999999999999853

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=100.00  E-value=5.1e-77  Score=610.51  Aligned_cols=371  Identities=26%  Similarity=0.411  Sum_probs=348.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+...+...++.++|+|||
T Consensus        49 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVV  127 (484)
T 3ros_A           49 SRAEILHDIANALKEHEDELAKMMTLEMGKLLSESKE-EVELCVSICNYYADHGPEMLKPTKLNSDLGNAYYLKQSTGVI  127 (484)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCTTSEEEEEEECCCEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeccCCCceeEEEecCCceE
Confidence            4555555555555666788899999999999999997 999999999999999887766644433566789999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++ |+.||++|.|+
T Consensus       128 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~-L~~~p~vd~I~  206 (484)
T 3ros_A          128 MACEPWNFPLYQVIRVFAPNFIVGNPILLKHAHNVPGSAALTAKIIKRAGAPEGSLINLYPSYDQLAD-IIADPRIQGVA  206 (484)
T ss_dssp             EEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHTCCTTSEEEECCCHHHHHH-HHTSTTEEEEE
T ss_pred             EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCChHHHHH-HHhCCCcCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999987 6777 99999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       207 fTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l  285 (484)
T 3ros_A          207 LTGSERGGSAVAEAAG-KNLKKSTMELGGNDAFIVLDDADPQVLRNVLNDARTYNDGQVCTSSKRIIVEKSRYDEVLHEL  285 (484)
T ss_dssp             EESCHHHHHHHHHHHH-HTTCEEEEECCCCCEEEECTTCCHHHHHHHHTTTTTGGGGCCTTSCCEEEEEGGGHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHh-ccCCceEeecCCCCcceeCCCCCHHHHHHHHHHHHhcCCCCCccCCceEEEcHHHHHHHHHHH
Confidence            9999999999999988 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      +++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||...+..|+|+.|||+.++.+++.++++|+||
T Consensus       286 ~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG  365 (484)
T 3ros_A          286 KNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKGAFFRPTILTDIAKDNPVFDKEVFG  365 (484)
T ss_dssp             HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSSCCCCCEEEECCCTTSTTTTSCCCS
T ss_pred             HHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCCceeCCeEeecCCCCCccccccccc
Confidence            99999999999999999999999999999999999999999999999998756689999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       366 PVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~  420 (484)
T 3ros_A          366 PIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTVINGRW  420 (484)
T ss_dssp             SEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCEETSCC
T ss_pred             ceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999854

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=100.00  E-value=3.1e-76  Score=610.18  Aligned_cols=372  Identities=38%  Similarity=0.667  Sum_probs=348.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.++++..++..+.. .+...++.++|+||
T Consensus        86 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  164 (528)
T 3u4j_A           86 ERSRLMFKVADLILARQEELALIESLEVGKPIAQARG-EIGFCADLWSYAAGQARALEGQTHNNIGDDRLGLVLREPVGV  164 (528)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSCTTEEEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCeeeccCCCCceeEEEeccceE
Confidence            3444444444444455677799999999999999976 999999999999999887766555544 56678999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++.|+.||++|.|
T Consensus       165 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I  244 (528)
T 3u4j_A          165 VGIITPWNFPFIIASERVPWAIGSGCTVVLKPSEFTSGTSIRLAELAREAGIPDGVFNVVTGYGDPAGQVLAEDPNVDMV  244 (528)
T ss_dssp             EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCSSTTHHHHHHHCTTCCEE
T ss_pred             EEEECCCccHHHHHHHHHHHHHHcCCeEEEEcCCccHHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999976 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       245 ~FTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~  323 (528)
T 3u4j_A          245 AFTGSVRVGTKLGEIAA-RTVKRVGLELGGKGPQIVFADADLDAAADGIAYGVYHNAGQCCISGSRLLVQEGIRDALMER  323 (528)
T ss_dssp             EEESCHHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHH-hcCCceEEecCCCCeeEECCCCCHHHHHHHHHHHHhhcCCCCCcCCCEEEEechHHHHHHHH
Confidence            99999999999999988 68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCC-CCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGD-KGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~-~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||...+. .|+|+.|||+.++.+++.++++|+
T Consensus       324 l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi  403 (528)
T 3u4j_A          324 LLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPTVFAGVTPDMSIAREEI  403 (528)
T ss_dssp             HHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCEEEESCCTTSHHHHSCC
T ss_pred             HHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecceEEecCCCCCcccccee
Confidence            9999999999999999999999999999999999999999999999999986543 789999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||||+++..|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus       404 FGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~  460 (528)
T 3u4j_A          404 FGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCWINSVI  460 (528)
T ss_dssp             CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCS
T ss_pred             eccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEECCCC
Confidence            999999999999999999999999999999999999999999999999999999975

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=100.00  E-value=1.1e-76  Score=610.40  Aligned_cols=370  Identities=38%  Similarity=0.638  Sum_probs=346.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+.++++.......+.++.+++++++|+|||+.+++. |+..+++.++|++.++++..+...+.. .+...++.++|+||
T Consensus        93 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  171 (504)
T 3ek1_A           93 ERAGILRKWFDLIIANADDIALIMTSEQGKPLAEARG-EVLYAASFIEWFAEEAKRVYGDTIPAPQNGQRLTVIRQPVGV  171 (504)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEECCSSTTEEEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccccccccceeeccCceE
Confidence            3444555554444555677799999999999999998 999999999999998877666544433 45678999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus       172 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~t~~~l~~l~~eaGlP~gv~~vv~g~~~~~g~~L~~~p~v~~V  251 (504)
T 3ek1_A          172 TAAITPWNFPAAMITRKAAPALAAGCTMIVRPADLTPLTALALGVLAEKAGIPAGVLQIVTGKAREIGAELTSNDTVRKL  251 (504)
T ss_dssp             EEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTTEEECCSCHHHHHHHHHHCTTCCEE
T ss_pred             EEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHhCCCcccEEEEeCCCHHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999877 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       252 ~FTGS~~~G~~i~~~aa-~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~  330 (504)
T 3ek1_A          252 SFTGSTEVGRLLMAQCA-PTIKRISLELGGNAPFIVFDDADLDAAVDGAMVSKYRNAGQTCVCANRIYVQRGVYDKFAEK  330 (504)
T ss_dssp             EEESCHHHHHHHHHHHG-GGTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEHHHHHHHHHH
T ss_pred             EEECCHHHHHHHHHhhh-hhcCCeEecCCCCCeeEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEehhHHHHHHHH
Confidence            99999999999999988 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      |+++++++++|||.|+++++||+++..+++++.++|++++.+|+++++||..  ..|+|+.|||+.++.+++.++++|+|
T Consensus       331 l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~--~~g~~~~PTvl~~v~~~~~i~~eEiF  408 (504)
T 3ek1_A          331 LAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKE--LGGLFFEPGILTGVTSDMLVAKEETF  408 (504)
T ss_dssp             HHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE--EETTEECCEEEEEECTTSGGGTSCCC
T ss_pred             HHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcc--CCCceECCeEEecCCCcChhhccccc
Confidence            9999999999999999999999999999999999999999999999999976  36899999999999999999999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |||+++++|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||+..
T Consensus       409 GPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~  464 (504)
T 3ek1_A          409 GPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVGHNTGL  464 (504)
T ss_dssp             SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEEESCSC
T ss_pred             CcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999865

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=100.00  E-value=7.3e-76  Score=604.34  Aligned_cols=373  Identities=59%  Similarity=1.000  Sum_probs=345.0

Q ss_pred             CCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceEE
Q psy5844          31 KPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCG  110 (442)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv~  110 (442)
                      +.++++.......+.++.+++++++|+|||+.++...|+..+++.+++++..+++..++..+...+...++.++|+|||+
T Consensus        85 R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVV~  164 (501)
T 1bxs_A           85 RGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCG  164 (501)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeeeccCCcceeEEecCCceEE
Confidence            34444444444445566779999999999999986459999999999999998877665444334556789999999999


Q ss_pred             EecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEee
Q psy5844         111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVAF  189 (442)
Q Consensus       111 ~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~f  189 (442)
                      +|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++.|+.||+++.|.|
T Consensus       165 ~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gv~~vv~g~~~~~g~~L~~~~~v~~I~F  244 (501)
T 1bxs_A          165 QIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVAF  244 (501)
T ss_dssp             EECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEEE
T ss_pred             EECCCcchHHHHHHHHHHHHHcCCeeeccCCCccHHHHHHHHHHHHHhCCCcceEEEEecCchHHHHHHHhCCCcCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999966 88999999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG  269 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~  269 (442)
                      |||+.+|+.|++.++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus       245 TGS~~~G~~i~~~aa~~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~  324 (501)
T 1bxs_A          245 TGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSV  324 (501)
T ss_dssp             ESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHHH
T ss_pred             ECCHHHHHHHHHHhhhccCCcEEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCCCCCEEEEchhHHHHHHHHHH
Confidence            99999999999988723889999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCC
Q psy5844         270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP  349 (442)
Q Consensus       270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgP  349 (442)
                      ++++++++|||.|+++++||+++..+++++.++|++++++|+++++||...+..|+|+.|||+.++.+++.++++|+|||
T Consensus       325 ~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFGP  404 (501)
T 1bxs_A          325 ERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGP  404 (501)
T ss_dssp             HHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCSS
T ss_pred             HHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEecCCCCCHHHhcccccc
Confidence            99999999999999999999999999999999999999999999999976444689999999999999999999999999


Q ss_pred             cccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       350 vl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       405 Vl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~  458 (501)
T 1bxs_A          405 VQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYS  458 (501)
T ss_dssp             EEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCC
T ss_pred             eEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEEECCCC
Confidence            999999999999999999999999999999999999999999999999999864

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=100.00  E-value=1.1e-76  Score=610.08  Aligned_cols=373  Identities=37%  Similarity=0.634  Sum_probs=348.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhh-chhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMS-YSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVG  107 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a-~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~G  107 (442)
                      .|..+++.......+.++.+++++++|+|||+.++ .. |+..+++.+++++.++++..+...+.. .+...++.++|+|
T Consensus        85 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~G  163 (498)
T 4f3x_A           85 ERSNALLKIADAIEKEADEFAALEALNCGKPINAVKND-ELPAIIDCWRFFAGAVRNLHAPAAGEYLPGHTSMIRRDPIG  163 (498)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHT-HHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHH-HHHHHHHHHHHHHHHHHHhcCccccCCcccccceEEEcCcc
Confidence            34455555545445567778999999999999999 66 999999999999999877666544332 5667899999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK  186 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~  186 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++ +.++.|+.||+++.
T Consensus       164 Vv~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKPs~~tp~t~~~l~~l~~ea-lP~gv~nvv~g~~~~~g~~L~~~p~v~~  242 (498)
T 4f3x_A          164 IVGSIAPWNYPLMMMAWKLAPAIGGGNTVVFKPSEQTPLTALKLARLIADI-LPEGVVNVITGRGETVGNALINHPKVGM  242 (498)
T ss_dssp             EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHTT-SCTTSEEECCCCTTTHHHHHHTCTTCCE
T ss_pred             eEEEECCCchHHHHHHHHHHHHHHcCCeEEEECCcccHHHHHHHHHHHHHh-CCcCeEEEEeCCchHHHHHHHhCCCcCE
Confidence            999999999999999999999999999999999999999999999999999 9999999999977 89999999999999


Q ss_pred             EeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHH
Q psy5844         187 VAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVA  266 (442)
Q Consensus       187 v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~  266 (442)
                      |.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|++
T Consensus       243 V~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~  321 (498)
T 4f3x_A          243 VSITGDIATGKKVLAAAA-KTVKRTHLELGGKAPVIVYGDADLEAVVNGIRTFGYYNAGQDCTAACRIYAEAGIYEKLVA  321 (498)
T ss_dssp             EEEESCHHHHHHHHHHHH-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCEEEEEEETTTHHHHHH
T ss_pred             EEEECCHHHHHHHHHHHH-hhCCceeecCCCCCcEEECCCCCHHHHHHHHHHHHHhcCCCCccCCceEEecHHHHHHHHH
Confidence            999999999999999998 6899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCC-EEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         267 RSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGA-QLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       267 ~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      +|+++++++++|+|.|+++++||+++..+++++.++|++++++|+ ++++||...+..|+|++|||+.++.+++.++++|
T Consensus       322 ~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eE  401 (498)
T 4f3x_A          322 DLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPTVVAGATQEDEIVRRE  401 (498)
T ss_dssp             HHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCEEEESCCTTSHHHHSC
T ss_pred             HHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCEEeecCCCCChhhCCc
Confidence            999999999999999999999999999999999999999999999 9999998765689999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      +||||+++++|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||+....
T Consensus       402 iFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~~  461 (498)
T 4f3x_A          402 VFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTWINTHFML  461 (498)
T ss_dssp             CCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC
T ss_pred             eeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEEEcCCCCC
Confidence            999999999999999999999999999999999999999999999999999999997643

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=100.00  E-value=6.2e-76  Score=604.75  Aligned_cols=374  Identities=65%  Similarity=1.069  Sum_probs=345.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..+++.......+.++.+++++++|+|||+.++...|+..+++.++|++..+++..++..+...+...++.++|+|||
T Consensus        83 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv  162 (500)
T 1o04_A           83 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC  162 (500)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhCcceecCCCceEEEEEecCCcE
Confidence            34445555545445566777999999999999998655999999999999998877766544433455678999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++ +.++.|+.||+++.|.
T Consensus       163 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I~  242 (500)
T 1o04_A          163 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVA  242 (500)
T ss_dssp             EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEE
T ss_pred             EEECCCCchHHHHHHHHHHHHHcCCEEEEECCccChHHHHHHHHHHHHhCCCcCeEEEEecCcHHHHHHHHhCCCcCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999966 8899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       243 FTGS~~~G~~i~~~aa~~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l  322 (500)
T 1o04_A          243 FTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERS  322 (500)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHhhhhhcCceEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhccCCCCCCCCCEEEEehhHHHHHHHHH
Confidence            99999999999998873489999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      +++++++++|||.|+++++||+++..+++++.++|++++++|+++++||...+..|+|+.|||+.++.++|.++++|+||
T Consensus       323 ~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~eEiFG  402 (500)
T 1o04_A          323 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG  402 (500)
T ss_dssp             HHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCS
T ss_pred             HHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEEEeCCCCCChhhhCcccc
Confidence            99999999999999999999999999999999999999999999999997644468999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||++++.|++++|+|+++|+.+|||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       403 PVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~  457 (500)
T 1o04_A          403 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYD  457 (500)
T ss_dssp             SEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSS
T ss_pred             eEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999865

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=100.00  E-value=8.6e-76  Score=605.08  Aligned_cols=372  Identities=40%  Similarity=0.702  Sum_probs=346.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc---ccC-CCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI---PIN-GDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~---~~~-~~~~~~~~~~P  105 (442)
                      .|..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.+++++.+...   ..+ .+...++.++|
T Consensus        73 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  151 (503)
T 3iwj_A           73 VRARYLRAIAAKVTEKKPELAKLESIDCGKPLDEAAW-DIDDVAGCFEYYADLAEKLDARQKAPVSLPMDTFKSHVLREP  151 (503)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHHHTTEEECCSCTTEEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccccccCCCccceEEEcC
Confidence            3444445544444566778899999999999999998 999999999999998877655431   112 45678999999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGV  184 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v  184 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++.|+.||++
T Consensus       152 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~~~v  231 (503)
T 3iwj_A          152 IGVVGLITPWNYPMLMATWKVAPALAAGCAAILKPSELASLTCLELGEICKEVGLPPGVLNILTGLGPEAGAPLATHPDV  231 (503)
T ss_dssp             CCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCHHHHTHHHHTCTTC
T ss_pred             CceEEEECCCchHHHHHHHHHHHHHhcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEeCCcHHHHHHHhhCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999999977 899999999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      +.|.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus       232 ~~I~FTGS~~~G~~i~~~aa-~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  310 (503)
T 3iwj_A          232 DKVAFTGSSATGSKIMTAAA-QLVKPVSLELGGKSPLVVFEDVDLDKAAEWAIFGCFWTNGQICSATSRLILHESIATEF  310 (503)
T ss_dssp             CEEEEESCHHHHHHHHHHHG-GGTCCEEEECCCCEEEEECSSSCHHHHHHHHHHHHTGGGGCCTTCEEEEEEETTTHHHH
T ss_pred             cEEEEECcHHHHHHHHHHHh-cCCCCEEEECCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCCcccCCeeEEcHHHHHHH
Confidence            99999999999999999988 58999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccCcchhHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +++|+++++++++|+|.++++++||+++..+++++.++|++++.+|+++++||...+  ..|+|++|||+.++.++|.++
T Consensus       311 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~  390 (503)
T 3iwj_A          311 LNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEPTIITDVTTNMQIW  390 (503)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCCEEEESCCTTSHHH
T ss_pred             HHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCCeeeecCCCCchhh
Confidence            999999999999999999999999999999999999999999999999999997654  579999999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       391 ~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~  451 (503)
T 3iwj_A          391 REEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVWVNCSQ  451 (503)
T ss_dssp             HSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSSC
T ss_pred             CceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEEEcCCC
Confidence            9999999999999999999999999999999999999999999999999999999999864

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=100.00  E-value=6.4e-76  Score=605.54  Aligned_cols=373  Identities=41%  Similarity=0.733  Sum_probs=345.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.++++.......+.++.+++++++|+|||+.++.. |+..+++.++|++.++++..++..+.+.+...++.++|+|||
T Consensus        81 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GVv  159 (503)
T 1a4s_A           81 ERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVC  159 (503)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceeEEEEecCceE
Confidence            3445555554555556777799999999999999988 999999999999999887766544333344678999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++++++.|+.||+++.|.|
T Consensus       160 ~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~~aGlP~gvv~vv~g~~~~g~~L~~~p~v~~V~F  239 (503)
T 1a4s_A          160 AGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSF  239 (503)
T ss_dssp             EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEE
T ss_pred             EEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEecCchHHHHHHhCCCcCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999985578899999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG  269 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~  269 (442)
                      |||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|+
T Consensus       240 TGS~~~G~~i~~~aa-~~~~~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~  318 (503)
T 1a4s_A          240 TGSVPTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVV  318 (503)
T ss_dssp             ESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHhh-hcCCceEEecCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEEEehHHHHHHHHHHH
Confidence            999999999999998 5899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc--C----CCCcccccceeccCcchhHHHH
Q psy5844         270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA--G----DKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~--~----~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      ++++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||...  +    ..|+|++|||+.++.++|.+++
T Consensus       319 ~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~  398 (503)
T 1a4s_A          319 KRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVK  398 (503)
T ss_dssp             HHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHH
T ss_pred             HHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccCCceeCCEEEecCCCCCHHHh
Confidence            999999999999999999999999999999999999999999999999764  2    3589999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +|+||||++++.|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||+...
T Consensus       399 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~  459 (503)
T 1a4s_A          399 EEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI  459 (503)
T ss_dssp             SCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC
T ss_pred             ccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeEEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999999998653

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=100.00  E-value=1.8e-76  Score=610.53  Aligned_cols=373  Identities=45%  Similarity=0.809  Sum_probs=345.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhc-hhHHHHHHHHHHHHHHhHhhhcCccccc----CCCcceEEEee
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSY-SVDVEYSLRTLRYYAGFADKIHGKTIPI----NGDFFAYTRHE  104 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~-~~ev~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~  104 (442)
                      .|..+++.......+.++.+++++++|+|||+.++. . |+..+++.++|++.++++..++.++.    +.+...++.++
T Consensus        99 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~  177 (517)
T 2o2p_A           99 DRGRLLYRLADVMEQHQEELATIEALDAGAVYTLALKT-HVGMSIQTFRYFAGWCDKIQGATIPINQARPNRNLTLTKKE  177 (517)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHT-TTHHHHHHHHHHHHHGGGCCEEEECCCCCTTSCEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCCceEEEEec
Confidence            344455555454455667779999999999999998 6 99999999999999888776654443    12335789999


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCC
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPG  183 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~  183 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|.+ +.++.|+.||+
T Consensus       178 P~GVV~~I~PwN~P~~~~~~~~a~ALaaGNtVVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~g~~~g~~L~~~~~  257 (517)
T 2o2p_A          178 PVGVCGIVIPWNYPLMMLSWKTAACLAAGNTVVIKPAQVTPLTALKFAELTLKAGIPKGVVNILPGSGSLVGQRLSDHPD  257 (517)
T ss_dssp             ECCEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHTTCCTTSEEECCSCHHHHHHHHHHCTT
T ss_pred             CCccEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCCHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999977 88999999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      ++.|.||||+.+|+.|++.++.+++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+
T Consensus       258 v~~V~FTGS~~~G~~I~~~aa~~~lk~v~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rv~V~~~i~d~  337 (517)
T 2o2p_A          258 VRKIGFTGSTEVGKHIMKSCALSNVKKVSLELGGKSPLIIFADCDLNKAVQMGMSSVFFNKGENCIAAGRLFVEESIHNQ  337 (517)
T ss_dssp             CCEEEEESCHHHHHHHHHHHHHHTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHH
T ss_pred             CCEEEEECCHHHHHHHHHHhHHhcCCeEEEECCCcCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCeEEEEeHHHHHH
Confidence            99999999999999999987723789999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHH
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++|+++++++++|||+|+++++||+++..+++++.++|++++++|+++++||...+..|+|++|||+.++.++|.+++
T Consensus       338 f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i~~  417 (517)
T 2o2p_A          338 FVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVFTDVEDHMYIAK  417 (517)
T ss_dssp             HHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSGGGT
T ss_pred             HHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEEeCCCCCChhhh
Confidence            99999999999999999999999999999999999999999999999999999976544689999999999999999999


Q ss_pred             HhhcCCcccccccCC--HHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         344 EEIFGPVQQLIRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~--~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +|+||||++++.|++  ++|+|+++|+++|||+++|||+|.+++.++++++++|.|+||+..
T Consensus       418 eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~  479 (517)
T 2o2p_A          418 EESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVFINTYN  479 (517)
T ss_dssp             SCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEEESCSS
T ss_pred             ccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEEECCCC
Confidence            999999999999999  999999999999999999999999999999999999999999864

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=100.00  E-value=1.8e-75  Score=605.85  Aligned_cols=370  Identities=35%  Similarity=0.565  Sum_probs=344.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHh-HhhhcCcccccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGF-ADKIHGKTIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~P~Gv  108 (442)
                      .|..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++.+ .+...++..+...+...++.++|+||
T Consensus        97 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  175 (538)
T 3qan_A           97 ERANILVKAAAIIRRRKHEFSAWLVHEAGKPWKEADA-DTAEAIDFLEYYARQMIELNRGKEILSRPGEQNRYFYTPMGV  175 (538)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHTCBCCCCCTTEEEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCeeecccCCcceeeecCCCcE
Confidence            3444444444444555778899999999999999999 999999999999988 56665655544356778999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus       176 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I  255 (538)
T 3qan_A          176 TVTISPWNFALAIMVGTAVAPIVTGNTVVLKPASTTPVVAAKFVEVLEDAGLPKGVINYVPGSGAEVGDYLVDHPKTSLI  255 (538)
T ss_dssp             EEEECCSTTTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHTTCCTTSEEECCBCTTTTHHHHHHCTTEEEE
T ss_pred             EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCccHHHHHHHHHHHHHhCCCCCeEEEEecCCHHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999977 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCC------CceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH
Q psy5844         188 AFTGSTEVGKLVQQGSGASN------LKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY  261 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~------~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~  261 (442)
                      .||||+.+|+.|++.++ .+      +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++
T Consensus       256 ~FTGS~~~G~~i~~~aa-~~~~~~~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~  334 (538)
T 3qan_A          256 TFTGSKDVGVRLYERAA-VVRPGQNHLKRVIVEMGGKDTVVVDRDADLDLAAESILVSAFGFSGQKCSAGSRAVIHKDVY  334 (538)
T ss_dssp             EEESCHHHHHHHHHHHT-SCCTTCCSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEETTTH
T ss_pred             EEECCHHHHHHHHHHhh-hccccccccccEEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCccCceeEEehHHH
Confidence            99999999999999988 46      899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHH
Q psy5844         262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~  341 (442)
                      |+|+++|+++++++++|+|.|+++++||+++..+++++.++|++++.+| ++++||...+..|+|++|||+.++.+++.+
T Consensus       335 d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G-~~~~gG~~~~~~g~~~~PTvl~~v~~~~~i  413 (538)
T 3qan_A          335 DEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEG-RLMTGGEGDSSTGFFIQPTIIADLDPEAVI  413 (538)
T ss_dssp             HHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EEEECCCEECSSSCEECCEEEESCCTTSHH
T ss_pred             HHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCC-eEEeCCCcCCCCCceeCCeeeecCCCCChh
Confidence            9999999999999999999999999999999999999999999999999 999999875447999999999999999999


Q ss_pred             HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCC
Q psy5844         342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS  402 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~  402 (442)
                      +++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+.
T Consensus       414 ~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~  474 (538)
T 3qan_A          414 MQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLYFNRN  474 (538)
T ss_dssp             HHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEEESSC
T ss_pred             hCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEEEeCC
Confidence            9999999999999999999999999999999999999999999999999999999999943

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=100.00  E-value=4e-76  Score=605.91  Aligned_cols=372  Identities=40%  Similarity=0.606  Sum_probs=345.7

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhc-hhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSY-SVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~-~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||+.++. . |+..+++.+++++.++++..++..+.+.+...++.++|+||
T Consensus        71 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~P~GV  149 (495)
T 3b4w_A           71 ERAAVIAAAVKMLAERKDLFTKLLAAETGQPPTIIETM-HWMGSMGAMNYFAGAADKVTWTETRTGSYGQSIVSREPVGV  149 (495)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHT-TTHHHHHHHHHHHTCGGGSCSEEEEEETTEEEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCceEEEEEccCce
Confidence            344555555455555677779999999999999998 6 99999999999999888777765443334467899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA  188 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~  188 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+.+.++.|+.||+++.|.
T Consensus       150 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v~~I~  229 (495)
T 3b4w_A          150 VGAIVAWNVPLFLAVNKIAPALLAGCTIVLKPAAETPLTANALAEVFAEVGLPEGVLSVVPGGIETGQALTSNPDIDMFT  229 (495)
T ss_dssp             EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECBTTSCHHHHHHHHHHHHTTCCTTSEEECCBSHHHHHHHTTCTTCCEEE
T ss_pred             EEEECCCcchHHHHHHHHHHHHHcCCEEEEecCCccHHHHHHHHHHHHHhCCCcCeEEEEeCCHHHHHHHHhCCCcCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999338999999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       230 FTGS~~~G~~i~~~aa-~~l~pv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l  308 (495)
T 3b4w_A          230 FTGSSAVGREVGRRAA-EMLKPCTLELGGKSAAIILEDVDLAAAIPMMVFSGVMNAGQGCVNQTRILAPRSRYDEIVAAV  308 (495)
T ss_dssp             EESCHHHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEGGGHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHhh-hcCCceeecCCCcceEEECCCCCHHHHHHHHHHHHhhcCCCCCCCCeEEEEcccHHHHHHHHH
Confidence            9999999999999888 589999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--CCCcccccceeccCcchhHHHHHhh
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--DKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      +++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||....  ..|+|++|||+.++.+++.++++|+
T Consensus       309 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~PTvl~~v~~~~~i~~eEi  388 (495)
T 3b4w_A          309 TNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQPTVFADVDNKMTIAQEEI  388 (495)
T ss_dssp             HHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCCEEEESCCTTSHHHHSCC
T ss_pred             HHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCCEEecCCCCCChhhhccc
Confidence            99999999999999999999999999999999999999999999999997643  3689999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus       389 FGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~  445 (495)
T 3b4w_A          389 FGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYGINWYA  445 (495)
T ss_dssp             CSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCEESSCC
T ss_pred             ccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEEECCCC
Confidence            999999999999999999999999999999999999999999999999999999864

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=100.00  E-value=7.6e-76  Score=604.66  Aligned_cols=374  Identities=34%  Similarity=0.571  Sum_probs=346.5

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+.. .+...++.++|+||
T Consensus        73 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  151 (497)
T 3k2w_A           73 TRQNMLRTFANKIRENKHILAPMLVAEQGKLLSVAEM-EVDVTATFIDYGCDNALTIEGDILPSDNQDEKIYIHKVPRGV  151 (497)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHTTTTCCEEEEECSSTTEEEEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCce
Confidence            3444555554544556777899999999999999997 999999999999998887766544432 56678999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|++ +.++.|+.||++|.|
T Consensus       152 V~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I  231 (497)
T 3k2w_A          152 VVGITAWNFPLALAGRKIGPALITGNTMVLKPTQETPLATTELGRIAKEAGLPDGVLNVINGTGSVVGQTLCESPITKMI  231 (497)
T ss_dssp             EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCSCTTTHHHHHHHCSSEEEE
T ss_pred             EEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCchHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999977 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       232 ~fTGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~  310 (497)
T 3k2w_A          232 TMTGSTVAGKQIYKTSA-EYMTPVMLELGGKAPMVVMDDADLDKAAEDALWGRFANCGQVCTCVERLYVHASVYDEFMAK  310 (497)
T ss_dssp             EEESCHHHHHHHHHHHT-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTSEEEEEEETTTHHHHHHH
T ss_pred             EEECcHHHHHHHHHHhh-hcCCCeEEEcCCCCceEEcCCCCHHHHHHHHHHHHHhCCCCCCcCCcEEEEeHHHHHHHHHH
Confidence            99999999999999998 68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcc--cCC--CCcccccceeccCcchhHHHH
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGR--AGD--KGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~--~~~--~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||..  .+.  .|+|+.|||+.++.+++.+++
T Consensus       311 l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~Ptvl~~v~~~~~i~~  390 (497)
T 3k2w_A          311 FLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWYEPTVLVDVKQDNIVVH  390 (497)
T ss_dssp             HHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCCCCEEEESCCTTSHHHH
T ss_pred             HHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCceeCCEEEecCCCCcHhhc
Confidence            9999999999999999999999999999999999999999999999999973  222  689999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      +|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+....
T Consensus       391 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~~  452 (497)
T 3k2w_A          391 EETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVYINRGMGE  452 (497)
T ss_dssp             SCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEEESCCSCC
T ss_pred             CCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEEEcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999997643

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=100.00  E-value=2.7e-75  Score=602.53  Aligned_cols=371  Identities=41%  Similarity=0.710  Sum_probs=345.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++.++++..++..+. ..+...++.++|+||
T Consensus        87 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  165 (515)
T 2d4e_A           87 ERKRYLLRIAELIEKHADELAVMECLDAGQVLRIVRA-QVARAAENFAFYAEYAEHAMEDRTFPVDRDWLYYTVRVPAGP  165 (515)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTGGGTTCEEECCBTTTEEEEEEEEECCC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecCCc
Confidence            3444555554544556777799999999999999996 99999999999999888776665444 245567899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus       166 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~g~~L~~~p~vd~I  245 (515)
T 2d4e_A          166 VGIITPWNAPLMLSTWRIAPALAFGNTVVLKPAEWSPFTATKLAEILKEADLPPGVFNLVQGFGEEAGAALVAHPLVPLL  245 (515)
T ss_dssp             EEEECCSSSHHHHHHHHHHHHHHTTCCEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEE
T ss_pred             eEEECCCCchhhhhhhhhhHHHHcCCeeeecCCCCcHHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999976 889999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       246 ~FTGS~~~G~~I~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~  324 (515)
T 2d4e_A          246 TLTGETETGKIVMRNAA-DHLKRLSPELGGKSPALVFADADLERALDAVVFQIFSFNGERCTASSRLLVEEKIFEDFVGK  324 (515)
T ss_dssp             EEESCHHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCCCEEEEEHHHHHHHHHH
T ss_pred             EEeCcHHHHHHHHHHHh-hcCCceEecCCCcCeEEEcCCCCHHHHHHHHHHHHHhcCCCCCCCCeEEEEehhHHHHHHHH
Confidence            99999999999999998 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC--------CCCcccccceeccCcchh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG--------DKGFYVQPTVFANVRDDM  339 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~--------~~g~~v~pti~~~~~~~~  339 (442)
                      |.++++++++|+|.|+++++||+++..+++++.++|++++++|+++++||....        ..|+|++|||+.+ .++|
T Consensus       325 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~~~g~~~~PTvl~~-~~~~  403 (515)
T 2d4e_A          325 VVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDLSRGNYLLPTVFVG-ENHM  403 (515)
T ss_dssp             HHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBCTTTTCBCCEEEEC-CTTS
T ss_pred             HHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCccccccccccccCCCceeCCEEEeC-CCCC
Confidence            999999999999999999999999999999999999999999999999997643        2689999999999 9999


Q ss_pred             HHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         340 KIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       340 ~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      .++++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       404 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~  467 (515)
T 2d4e_A          404 KIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVYLNSHN  467 (515)
T ss_dssp             HHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSSC
T ss_pred             hhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999999999864

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=100.00  E-value=1.7e-75  Score=603.70  Aligned_cols=372  Identities=28%  Similarity=0.443  Sum_probs=344.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++.+.+...+...+.. .+...++.++|+||
T Consensus        87 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  165 (521)
T 4e4g_A           87 RRARVFMKFVQLLNDNMNELAEMLSREHGKTIDDAKG-DIVRGLEVCEFVIGIPHLQKSEFTEGAGPGIDMYSIRQPVGI  165 (521)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCSCHHHHHH-HHHHHHHHHHHHHTHHHHTCEEEEEEEETTEEEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCcceeEEEcCCcE
Confidence            3444444444444556677799999999999999998 999999999999987776655433222 45678999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA  188 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~  188 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+++.++.|+.||+++.|.
T Consensus       166 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~~~~L~~~p~vd~I~  245 (521)
T 4e4g_A          166 GAGITPFNFPGMIPMWMFAPAIACGNAFILKPSERDPSVPIRLAELMIEAGLPAGILNVVNGDKGAVDAILTHPDIAAVS  245 (521)
T ss_dssp             EEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCTTSTHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTCCEEE
T ss_pred             EEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCcCeEEEEeCChHHHHHHHhCCCcCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999767779999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCc-cHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDT-IYDEFVAR  267 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~-~~~~f~~~  267 (442)
                      ||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++ ++|+|+++
T Consensus       246 FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~~i~d~f~~~  324 (521)
T 4e4g_A          246 FVGSTPIARYVYGTAA-MNGKRAQCFGGAKNHMIIMPDADLDQAANALIGAGYGSAGERCMAISVAVPVGEETANRLIDK  324 (521)
T ss_dssp             EESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSEEEEEEBSHHHHHHHHHH
T ss_pred             EECCHHHHHHHHHHHh-hcCCCeeecCCCCCeEEEcCCCCHHHHHHHHHHHHHhCCCCCcccCeEEEEeCchHHHHHHHH
Confidence            9999999999999888 589999999999999999999999999999999999999999999999999999 99999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc----CCCCcccccceeccCcchhHHHH
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA----GDKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~----~~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++++++++|+|.|+++++||+++..+++++.++|++++.+|+++++||.+.    ...|+|+.|||+.++.+++.+++
T Consensus       325 l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~~PTvl~~v~~~~~i~~  404 (521)
T 4e4g_A          325 LVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFIGGCLFDDVTPDMDIYK  404 (521)
T ss_dssp             HHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCCCCEEEESCCTTSHHHH
T ss_pred             HHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEECCEEEEcCCCCCHhhc
Confidence            99999999999999999999999999999999999999999999999999752    24789999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +|+||||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus       405 eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~vN~~~  464 (521)
T 4e4g_A          405 TEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVGVNVPI  464 (521)
T ss_dssp             SCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEEESCSS
T ss_pred             CcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEEECCCC
Confidence            999999999999999999999999999999999999999999999999999999999875

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=100.00  E-value=2.5e-75  Score=599.39  Aligned_cols=373  Identities=38%  Similarity=0.642  Sum_probs=347.7

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+.++++.......+.++.+++++++|+|||..+++. |+..+++.++|++..+.+..+...+.. .+...+++++|+||
T Consensus        70 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  148 (481)
T 3jz4_A           70 ERATILRNWFNLMMEHQDDLARLMTLEQGKPLAEAKG-EISYAASFIEWFAEEGKRIYGDTIPGHQADKRLIVIKQPIGV  148 (481)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEECCSSTTEEEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceEEEEEcCccE
Confidence            3444555544444555677799999999999999998 999999999999988776655544432 45678899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ +.++.|+.||+++.|
T Consensus       149 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~l~~~aGlP~gvv~vv~g~~~~~g~~L~~~p~v~~I  228 (481)
T 3jz4_A          149 TAAITPWNFPAAMITRKAGPALAAGCTMVLKPASQTPFSALALAELAIRAGVPAGVFNVVTGSAGAVGNELTSNPLVRKL  228 (481)
T ss_dssp             EEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCBCTHHHHHHHHHCTTEEEE
T ss_pred             EEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCCcHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999976 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       229 ~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~  307 (481)
T 3jz4_A          229 SFTGSTEIGRQLMEQCA-KDIKKVSLELGGNAPFIVFDDADLDKAVEGALASKFRNAGQTCVCANRLYVQDGVYDRFAEK  307 (481)
T ss_dssp             EEESCHHHHHHHHHHHT-TTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHHHHH
T ss_pred             EEECCHHHHHHHHHHHh-hcCCceEEecCCCCeEEEcCCCCHHHHHHHHHHHHHHhCCCcccCCcEEEEeHHHHHHHHHH
Confidence            99999999999999988 68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF  347 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f  347 (442)
                      |+++++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||...+..|+|+.|||+.++.+++.++++|+|
T Consensus       308 l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i~~eEiF  387 (481)
T 3jz4_A          308 LQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTILVDVPANAKVSKEETF  387 (481)
T ss_dssp             HHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEEEESCCTTSGGGTSCCC
T ss_pred             HHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEEEecCCCCccccccccc
Confidence            99999999999999999999999999999999999999999999999999875556899999999999999999999999


Q ss_pred             CCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       348 gPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||++..
T Consensus       388 GPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~  444 (481)
T 3jz4_A          388 GPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVGINTGII  444 (481)
T ss_dssp             SSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEEESCSCC
T ss_pred             CceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999998753

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=100.00  E-value=2.9e-75  Score=598.59  Aligned_cols=373  Identities=34%  Similarity=0.579  Sum_probs=346.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++..+++..+...+.. .+...++.++|+||
T Consensus        67 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  145 (479)
T 2imp_A           67 ERASWLRKISAGIRERASEISALIVEEGGKIQQLAEV-EVAFTADYIDYMAEWARRYEGEIIQSDRPGENILLFKRALGV  145 (479)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHTTTTTCCCEEECCSSTTEEEEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhhCCccccCCCCceeEEEEeccce
Confidence            4445555555555556777899999999999999997 999999999999988877666544432 34567899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus       146 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~V  225 (479)
T 2imp_A          146 TTGILPWNFPFFLIARKMAPALLTGNTIVIKPSEFTPNNAIAFAKIVDEIGLPRGVFNLVLGRGETVGQELAGNPKVAMV  225 (479)
T ss_dssp             EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHHCTTEEEE
T ss_pred             EEEECCCchHHHHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHhCCCcCeEEEEECCcHHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999976 789999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       226 ~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~  304 (479)
T 2imp_A          226 SMTGSVSAGEKIMATAA-KNITKVCLELGGKAPAIVMDDADLELAVKAIVDSRVINSGQVCNCAERVYVQKGIYDQFVNR  304 (479)
T ss_dssp             EEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHTTSSTTTTCCSSSCSEEEEEGGGHHHHHHH
T ss_pred             EEeCCHHHHHHHHHHHh-ccCCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCcCCcEEEEehhhHHHHHHH
Confidence            99999999999999988 68999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCC-CCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFD-LNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~-~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |.++++++++|+|.| +++++||+++..+++++.+++++++++|+++++||...+..|+|++|||+.++.+++.++++|+
T Consensus       305 l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~Ptvl~~v~~~~~~~~eEi  384 (479)
T 2imp_A          305 LGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGYYYPPTLLLDVRQEMSIMHEET  384 (479)
T ss_dssp             HHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSCCCCCEEEESCCTTSGGGGSCC
T ss_pred             HHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCceECCEEEeCCCCCCHHHhCcc
Confidence            999999999999999 9999999999999999999999999999999999976434689999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       385 FGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~iN~~~~  442 (479)
T 2imp_A          385 FGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETYINRENF  442 (479)
T ss_dssp             CSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEEESSCCC
T ss_pred             CCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEEECCCCC
Confidence            9999999999999999999999999999999999999999999999999999998654

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=100.00  E-value=3.3e-75  Score=601.14  Aligned_cols=368  Identities=45%  Similarity=0.765  Sum_probs=342.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhh----hcCcccccCCCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADK----IHGKTIPINGDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~P  105 (442)
                      .+..+++.......+.++.+++++++|+|||..++   |+..+++.+++++.++++    +.++..+...+. .+++++|
T Consensus        75 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea---ev~~~~~~~~~~a~~~~~~~~~~~g~~~~~~~~~-~~~~~~P  150 (517)
T 3r31_A           75 ARGRILKRAADIMRERNDALSTLETLDTGKPIQET---IVADPTSGADAFEFFGGIAPSALNGDYIPLGGDF-AYTKRVP  150 (517)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHH---HHHSHHHHHHHHHHHHHHHHHHTCCCEEECSSSE-EEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHH---HHHHHHHHHHHHHHHhhhccccccCcccccCCCc-ceEEEcC
Confidence            34444444444445556777999999999999998   999999999999998877    666655444455 8999999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD  185 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~  185 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+.+.++.|+.||++|
T Consensus       151 ~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~ll~eaGlP~gvv~vv~g~~~~g~~L~~~p~vd  230 (517)
T 3r31_A          151 LGVCVGIGAWNYPQQIACWKAAPALVAGNAMVFKPSENTPLGALKIAEILIEAGLPKGLFNVIQGDRDTGPLLVNHPDVA  230 (517)
T ss_dssp             CSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCSHHHHHHHHHHHTTCCTTSEEECCCCTTHHHHHHTCTTEE
T ss_pred             ccEEEEECCCcchHHHHHHHHHHHHHcCCEEEEEcCcccHHHHHHHHHHHHHhCcCcccEEEEECCHHHHHHHHhCCCcC
Confidence            99999999999999999999999999999999999999999999999999999999999999999448999999999999


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|+||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus       231 ~I~FTGS~~~G~~i~~~aa-~~lk~v~lElGGk~p~IV~~dADl~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~  309 (517)
T 3r31_A          231 KVSLTGSVPTGRKVAAAAA-GHLKHVTMELGGKSPMIVFDDADIESAVGGAMLGNFYSSGQVCSNGTRVFVQKKAKARFL  309 (517)
T ss_dssp             EEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHTSCCHHHHTTCEEEEEEGGGHHHHH
T ss_pred             EEeccCCHHHHHHHHHHhh-cCCCcEEEEcCCcCeEEEecCCCHHHHHHHHHHHHhcCCCceeccCceEEEeHHHHHHHH
Confidence            9999999999999999988 589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcc-cC---CCCcccccceeccCcchhHH
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGR-AG---DKGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~-~~---~~g~~v~pti~~~~~~~~~~  341 (442)
                      ++|+++++++++|+|.|+++++||+++..+++++.++|++++++|+++++|| . .+   ..|+|+.|||+.++.+++.+
T Consensus       310 ~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG-~~~~~~~~~g~~~~PTvl~~v~~~~~i  388 (517)
T 3r31_A          310 ENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGG-GIPNNVAGEGAYVQPTVFADVTDDMTI  388 (517)
T ss_dssp             HHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECC-SCCSSCCSSSBCCCCEEEEEECTTSHH
T ss_pred             HHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECC-ccCcccCCCCceECCEEEecCCCCCcc
Confidence            9999999999999999999999999999999999999999999999999999 4 21   37899999999999999999


Q ss_pred             HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +++|+||||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       389 ~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~  450 (517)
T 3r31_A          389 AREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLWINTYN  450 (517)
T ss_dssp             HHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEEESSCC
T ss_pred             ccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEEECCCC
Confidence            99999999999999999999999999999999999999999999999999999999999865

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=100.00  E-value=6.3e-75  Score=596.54  Aligned_cols=371  Identities=36%  Similarity=0.626  Sum_probs=344.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||..++...|+..+++.+++++.++++..++..+.+ .+...++.++|+||
T Consensus        83 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  162 (495)
T 1wnd_A           83 VRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGV  162 (495)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhcCccccCCCCCceeEEeeecCCe
Confidence            44455555555555667778999999999999999765999999999999998877766544433 34567899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++ +|+|++|+++|++ +.++.|+.||++|.|
T Consensus       163 V~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~ea-lP~gvv~vv~g~~~~~g~~L~~~p~vd~I  241 (495)
T 1wnd_A          163 VASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFGRGKTVGDPLTGHPKVRMV  241 (495)
T ss_dssp             EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTTT-SCTTSEEECCCCTTTTHHHHHTCTTEEEE
T ss_pred             EEEECCCcchHHHHHHHHHHHHHcCCeeEeeCCCCChHHHHHHHHHHHHh-CCcCeEEEEeCCCHHHHHHHHhCCCcCEE
Confidence            99999999999999999999999999999999999999999999999999 9999999999966 889999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       242 ~FTGS~~~G~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~  320 (495)
T 1wnd_A          242 SLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEK  320 (495)
T ss_dssp             EEESCHHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHH
T ss_pred             EEECcHHHHHHHHHHHH-hcCCccccccCCCCeEEECCcCCHHHHHHHHHHHHHhcCCCCCCCCcEEEecchhHHHHHHH
Confidence            99999999999999988 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcC-CEEEeCCc-ccCCCCcccccceeccCcchhHHHHHh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQG-AQLVAGGG-RAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~G-a~~~~gg~-~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      |+++++++++|+|.|+++++|||++..+++++.++|++++++| +++++||. .. +.|+|+.|||+.++.++|.++++|
T Consensus       321 l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~-~~g~~~~PTvl~~v~~~~~i~~eE  399 (495)
T 1wnd_A          321 LGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRK-GNGYYYAPTLLAGALQDDAIVQKE  399 (495)
T ss_dssp             HHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCS-SSSCCBCCEEEECCCTTSHHHHSC
T ss_pred             HHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccC-CCCCeeCCEEEeCCCCCChhhhcc
Confidence            9999999999999999999999999999999999999999999 99999997 43 368999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +||||+++..|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+..
T Consensus       400 iFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~  457 (495)
T 1wnd_A          400 VFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHF  457 (495)
T ss_dssp             CCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCC
T ss_pred             ccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            9999999999999999999999999999999999999999999999999999999864

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=100.00  E-value=7.9e-75  Score=596.08  Aligned_cols=369  Identities=34%  Similarity=0.584  Sum_probs=339.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEE-eeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTR-HEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~P~Gv  108 (442)
                      .+..+++.......+..+.+++++++|+|||+.+++..|+..+++.+++++............ ..+...++. ++|+||
T Consensus        86 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~a~~~~~~~~~~~~-~~~~~~~~~~~~P~GV  164 (497)
T 3i44_A           86 ERLGFVEKILEIYEKRSSDMAKTISMEMGAPIDMALNAQTATGSSHIRNFIKAYKEFSFQEAL-IEGNEQAILHYDAIGV  164 (497)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEEES-STTCSSCEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHhhcccccccc-cCCceeEEEeecCceE
Confidence            444555555454456677789999999999999999339999999999998876554322111 124556778 999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|
T Consensus       165 v~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvvnvv~g~~~~~g~~L~~hp~v~~I  244 (497)
T 3i44_A          165 VGLITPWNWPMNQVTLKVIPALLAGCTMVLKPSEIAPLSAMLFAEILDEAALPSGVFNLINGDGANVGSYLSAHPDLEMI  244 (497)
T ss_dssp             EEEECCSSSHHHHHHHHHHHHHHHTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCTTTHHHHHHHCTTCCEE
T ss_pred             EEEECCCcchHHHHHHHHHHHHHcCCEEEEECCcccHHHHHHHHHHHHHhCcCCCeEEEEeCCChHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999977 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      +||||+.+|+.|++.++ +++||+++|+|||||+||++||| +.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       245 ~FTGS~~~G~~i~~~aa-~~~k~v~lElGGk~p~IV~~dAD-~~Aa~~i~~~~f~n~GQ~C~a~~rvlV~~~i~d~f~~~  322 (497)
T 3i44_A          245 SFTGSTRAGKDISKNAS-NTLKRVCLELGGKGANIIFADAD-IDALQRGVRHCFYNSGQSCNAPTRMLVEQAIYDKAIKT  322 (497)
T ss_dssp             EEESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSC-TTHHHHHHHHHHGGGGCCTTCCCEEEEEGGGHHHHHHH
T ss_pred             EEeCcHHHHHHHHHHHh-hcCCceeeccCCCCceEECCChh-HHHHHHHHHHHHhcCCCCcccCCEEEEcHHHHHHHHHH
Confidence            99999999999999998 68999999999999999999999 99999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCc-ccC--CCCcccccceeccCcchhHHHHH
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGG-RAG--DKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~-~~~--~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      |+++++++++|||.|+++++||+++..+++++.++|++++.+|+++++||. ..+  ..|+|++|||+.++.+++.++++
T Consensus       323 l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~PTvl~~v~~~~~i~~e  402 (497)
T 3i44_A          323 AKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYYVRPTVFADVKPHMRIFRE  402 (497)
T ss_dssp             HHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHS
T ss_pred             HHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcEECCEEEEeCCCCCHHHcC
Confidence            999999999999999999999999999999999999999999999999994 322  36899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeC
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFS  401 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~  401 (442)
                      |+||||++++.|++++|+|+++|+.+|||+++|||+|.+++.++++++++|.|+||.
T Consensus       403 EiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~iN~  459 (497)
T 3i44_A          403 EIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVEVNG  459 (497)
T ss_dssp             CCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEETT
T ss_pred             cccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEEECC
Confidence            999999999999999999999999999999999999999999999999999999995

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=100.00  E-value=2.4e-75  Score=600.99  Aligned_cols=367  Identities=35%  Similarity=0.542  Sum_probs=341.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC--C----CcceEEEe
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN--G----DFFAYTRH  103 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~  103 (442)
                      .|..+++.......+.++.+++++++|+|||..+++. |+..+++.+++++..+++..++..+..  .    +...++.+
T Consensus        72 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  150 (505)
T 3prl_A           72 ERVDLLYAWADLLEERKEIIGELIMHEVAKPKKSAIG-EVSRTADIIRHTADEALRLNGETLKGDQFKGGSSKKIALVER  150 (505)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHHTCCEEEEEGGGSTTTCSSEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccccccCCceeEEEE
Confidence            3444444444444556777899999999999999998 999999999999998877666544332  2    45678999


Q ss_pred             eccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCC
Q psy5844         104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHP  182 (442)
Q Consensus       104 ~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~  182 (442)
                      +|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..|++++.++|+|+|++|+++|++ ++++.|+.||
T Consensus       151 ~P~GVV~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKpse~tp~ta~~l~~ll~eaGlP~gvv~vv~g~~~~~g~~L~~~p  230 (505)
T 3prl_A          151 EPLGVVLAISPFNYPVNLAAAKIAPALVTGNTVVFKPATQGSLSGIKMVEALADAGAPEGIIQVVTGRGSVIGDHLVEHP  230 (505)
T ss_dssp             EECSEEEEEECSSSTTHHHHHHHHHHHHTTCEEEEEECSTTHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHTCT
T ss_pred             cCCcEEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999976 8999999999


Q ss_pred             CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         183 GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       183 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      ++|.|.||||+.+|+.|++.++   +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|
T Consensus       231 ~vd~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d  307 (505)
T 3prl_A          231 GIDMITFTGGTTTGERISEKAK---MIPVVLELGGKDPAIVLDDADLKLTASQIVSGAFSYSGQRCTAIKRVFVQDSVAD  307 (505)
T ss_dssp             TCCEEEEESCHHHHHHHHHHCC---SSCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHH
T ss_pred             CCCEEEEeCCHHHHHHHHHHcc---CCcEEEECCCCCCCccCCCCCHHHHHHHHHHHHHhcCCCccccCceEEEeHHHHH
Confidence            9999999999999999999876   8999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +|+++|+++++++++|||. +++++||+++..+++++.++|++++.+|+++++||..   .|+|+.|||+.++.+++.++
T Consensus       308 ~f~~~l~~~~~~~~~g~p~-~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~---~g~~~~PTvl~~v~~~~~i~  383 (505)
T 3prl_A          308 QLVANIKELVEQLTVGSPE-DDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKR---QGNLLSPTLLDDVTPAMRVA  383 (505)
T ss_dssp             HHHHHHHHHHHHCCBSCTT-TTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSGGG
T ss_pred             HHHHHHHHHHHhcccCCCC-CcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCceeCCeEeecCCCCChhh
Confidence            9999999999999999999 9999999999999999999999999999999999974   68999999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ++|+||||++++.|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+...
T Consensus       384 ~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~iN~~~~  445 (505)
T 3prl_A          384 WEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVHINAKTE  445 (505)
T ss_dssp             TSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEEESSCCC
T ss_pred             cCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEEEcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999764

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=100.00  E-value=5.8e-75  Score=596.66  Aligned_cols=372  Identities=35%  Similarity=0.577  Sum_probs=345.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||..++.. |+..+++.+++++.++++..++..+.. .+...++.++|+||
T Consensus        71 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  149 (487)
T 2w8n_A           71 ERSSLLRKWYNLMIQNKDDLARIITAESGKPLKEAHG-EILYSAFFLEWFSEEARRVYGDIIHTPAKDRRALVLKQPIGV  149 (487)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCCEEECCSCTTCEEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEEecceE
Confidence            3444555554545556777799999999999999998 999999999999998877666554432 45567899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeec---CCc-cchhhhhcCCCc
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP---GYG-DAGAALVQHPGV  184 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~---~~~-~~~~~l~~~~~v  184 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++   |++ +.++.|+.||++
T Consensus       150 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~~~~g~~~~~~~~L~~~~~v  229 (487)
T 2w8n_A          150 AAVITPWNFPSAMITRKVGAALAAGCTVVVKPAEDTPFSALALAELASQAGIPSGVYNVIPCSRKNAKEVGEAICTDPLV  229 (487)
T ss_dssp             EEEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCCCHHHHHHHHHHHTTCTTE
T ss_pred             EEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCeEEEEecCCCCcHHHHHHHHhCCCc
Confidence            9999999999999999999999999999999999999999999999999999999999999   866 789999999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      +.|.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus       230 ~~V~fTGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  308 (487)
T 2w8n_A          230 SKISFTGSTTTGKILLHHAA-NSVKRVSMELGGLAPFIVFDSANVDQAVAGAMASKFRNTGQTCVCSNQFLVQRGIHDAF  308 (487)
T ss_dssp             EEEEEEECHHHHHHHHHHHH-TTTCEEEEEECEEEEEEECTTSCHHHHHHHHHHHHTCCCSCCCSEEEEEEEEHHHHHHH
T ss_pred             CEEEEeCCHHHHHHHHHHHh-ccCCcEEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCccccCCEEEEcccHHHHH
Confidence            99999999999999999988 68999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhh-cccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCc-ccccceeccCcchhHHH
Q psy5844         265 VARSGERAKR-RTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGF-YVQPTVFANVRDDMKIA  342 (442)
Q Consensus       265 ~~~l~~~~~~-~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~-~v~pti~~~~~~~~~~~  342 (442)
                      +++|++++++ +++|+|.|+++++||+++..+++++.++|++++++|+++++||... +.|+ |++|||+.++.+++.++
T Consensus       309 ~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~-~~g~~~~~Ptvl~~v~~~~~i~  387 (487)
T 2w8n_A          309 VKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRH-QLGKNFFEPTLLCNVTQDMLCT  387 (487)
T ss_dssp             HHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBC-TTCTTCBCCEEEEEECGGGGTT
T ss_pred             HHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccC-CCCCceECCEEEecCCCcchhh
Confidence            9999999999 9999999999999999999999999999999999999999999764 3588 99999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+...
T Consensus       388 ~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~  449 (487)
T 2w8n_A          388 HEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVGVNEGLI  449 (487)
T ss_dssp             CTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEEESCSCC
T ss_pred             hcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEEEcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999998653

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=100.00  E-value=2.3e-74  Score=590.09  Aligned_cols=372  Identities=28%  Similarity=0.442  Sum_probs=347.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+.......+...+++++|+|||
T Consensus        52 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  130 (462)
T 3etf_A           52 QRAQTLRDIGQALRAHAEEMAQCITREMGKPIKQARA-EVTKSAALCDWYAEHGPAMLNPEPTLVENQQAVIEYRPLGVI  130 (462)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEECSSGGGCEEEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHhHHHhcCCcccCCCCceeEEEeecCcEE
Confidence            4445555555555566788899999999999999998 999999999999998877665442111455688999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|+++.+..|+.||+++.|+|
T Consensus       131 ~~I~PwN~P~~~~~~~~~~ALaaGN~VvlKps~~tp~~~~~l~~~l~~aglP~gv~~vv~g~~~~~~~l~~~~~v~~v~f  210 (462)
T 3etf_A          131 LAIMPWNFPLWQVLRGAVPILLAGNSYLLKHAPNVTGCAQMIARILAEAGTPAGVYGWVNANNEGVSQMINDPRIAAVTV  210 (462)
T ss_dssp             EEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHTTCCBTTEEECCCCHHHHHHHHTSTTEEEEEE
T ss_pred             EEECCCchHHHHHHHHHHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHhCCCcCeEEEEECCHHHHHHHhcCCCCCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999996688899999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG  269 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~  269 (442)
                      |||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|.
T Consensus       211 TGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~~~l~  289 (462)
T 3etf_A          211 TGSVRAGAAIGAQAG-AALKKCVLELGGSDPFIVLNDADLELAVKAAVAGRYQNTGQVCAAAKRFIVEEGIAQAFTDRFV  289 (462)
T ss_dssp             ESCHHHHHHHHHHHH-HTTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHHH
T ss_pred             eCCchHHHHHHHHHh-ccCCceEEEcCCCCccEECCCCCHHHHHHHHHHHHHhcCCCcccCCcEEEEehhHHHHHHHHHH
Confidence            999999999999988 5899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcCC
Q psy5844         270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGP  349 (442)
Q Consensus       270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgP  349 (442)
                      ++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...+..|+|++|||+.++.+++.++++|+|||
T Consensus       290 ~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptvl~~v~~~~~~~~eE~FGP  369 (462)
T 3etf_A          290 AAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATVLADVTPDMTAFRQELFGP  369 (462)
T ss_dssp             HHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEEESCCTTSHHHHSCCCSS
T ss_pred             HHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEEEECCCCCChhhcCceeCc
Confidence            99999999999999999999999999999999999999999999999986666899999999999999999999999999


Q ss_pred             cccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         350 VQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       350 vl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      |++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus       370 Vl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~  423 (462)
T 3etf_A          370 VAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVFINGYS  423 (462)
T ss_dssp             EEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEEESSCC
T ss_pred             EEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEEECCCC
Confidence            999999999999999999999999999999999999999999999999999875

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=100.00  E-value=1.5e-74  Score=597.57  Aligned_cols=371  Identities=33%  Similarity=0.542  Sum_probs=342.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc-cC-CCcceEEEeeccc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-IN-GDFFAYTRHEPVG  107 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~~~~~~P~G  107 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+ .. .+...++.++|+|
T Consensus        97 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  175 (516)
T 1uzb_A           97 DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLG  175 (516)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccccCCCCceEEEEEeccc
Confidence            3444555554544555677799999999999999997 9999999999999988877665432 11 3556789999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK  186 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~  186 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++ +.++.|+.||+++.
T Consensus       176 Vv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKps~~tp~ta~~l~~l~~eaGlP~gvv~vv~g~~~~~~~~L~~~~~v~~  255 (516)
T 1uzb_A          176 AGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRF  255 (516)
T ss_dssp             EEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCE
T ss_pred             eEEEECCCccHHHHHHHHHHHHHHcCCeEEEeCCCCCHHHHHHHHHHHHHhCCCcCeEEEEeCCCchhhhhhhcCCCcCE
Confidence            99999999999999999999999999999999999999999999999999999999999999966 88999999999999


Q ss_pred             EeecCCHHHHHHHHhhccC-----CCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH
Q psy5844         187 VAFTGSTEVGKLVQQGSGA-----SNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY  261 (442)
Q Consensus       187 v~ftGs~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~  261 (442)
                      |.||||+.+|+.|++.+++     +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++
T Consensus       256 I~FTGS~~~G~~i~~~aa~~~~~~~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~  335 (516)
T 1uzb_A          256 INFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAY  335 (516)
T ss_dssp             EEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHH
T ss_pred             EEecCCHHHHHHHHHHhhhccccccccceeEEecCCccceeECCCCCHHHHHHHHHHHHHhCCCCccccCcEEEEchHHH
Confidence            9999999999999998872     47899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHH
Q psy5844         262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~  341 (442)
                      |+|+++|+++++++++|+| ++++++|||++..+++++.++|++++.+| ++++||...+..|+|+.|||+.++.++|.+
T Consensus       336 d~f~~~l~~~~~~~~~G~p-~~~~~~Gpli~~~~~~~v~~~i~~a~~~G-~v~~gg~~~~~~g~~~~Ptvl~~v~~~~~i  413 (516)
T 1uzb_A          336 EPVLERVLKRAERLSVGPA-EENPDLGPVVSAEQERKVLSYIEIGKNEG-QLVLGGKRLEGEGYFIAPTVFTEVPPKARI  413 (516)
T ss_dssp             HHHHHHHHHHHTTCCBSCG-GGCCSBCCCSCHHHHHHHHHHHHHHTTTS-EEEECCSBCSSSSCCBCCEEEESCCTTSGG
T ss_pred             HHHHHHHHHHHHhccCCCC-ccccccCCCCCHHHHHHHHHHHHHHHHCC-CEEECCccCCCCCcEECCEEEECCCCCCHh
Confidence            9999999999999999999 99999999999999999999999999888 899998753346899999999999999999


Q ss_pred             HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+..
T Consensus       414 ~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~iN~~~  475 (516)
T 1uzb_A          414 AQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKI  475 (516)
T ss_dssp             GTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCS
T ss_pred             hhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEEEeCCC
Confidence            99999999999999999999999999999999999999999999999999999999999854

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=100.00  E-value=1.2e-74  Score=595.68  Aligned_cols=367  Identities=31%  Similarity=0.488  Sum_probs=342.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc---CC--CcceEEEee
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI---NG--DFFAYTRHE  104 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~--~~~~~~~~~  104 (442)
                      .+..+++.......+.++.+++++++|+|||..++.. |+..+++.+++++.++++..++..+.   +.  +...++.++
T Consensus        78 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~l~~~a~~~~~~~g~~~~~~~~~~~~~~~~~~~~~  156 (501)
T 1uxt_A           78 ERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRRE  156 (501)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHTGGGGGGGTCCEEEESTTSSTTTTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccccCCCcCceEEEEEe
Confidence            4445555555555566778899999999999999997 99999999999999887776665443   22  336789999


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCc
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGV  184 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v  184 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|+++.++.|+.||++
T Consensus       157 P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~eaGlP~gvv~vv~g~~~~g~~L~~~~~v  236 (501)
T 1uxt_A          157 PLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRV  236 (501)
T ss_dssp             ECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTCTTC
T ss_pred             eccEEEEECCCccHHHHHHHHHHHHHHcCCEEEEeCCCCchHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHhCCCc
Confidence            99999999999999999999999999999999999999999999999999999999999999999866788999999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      |.|.||||+.+|+.|++.++   +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus       237 d~I~FTGS~~~G~~i~~~aa---l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  313 (501)
T 1uxt_A          237 AAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKL  313 (501)
T ss_dssp             CEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHH
T ss_pred             CEEEEeCcHHHHHHHHHhcC---CCeEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhcCCCCCCcCCcEEEeccchHHHH
Confidence            99999999999999999876   899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCC-cccccceeccCc---chhH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKG-FYVQPTVFANVR---DDMK  340 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g-~~v~pti~~~~~---~~~~  340 (442)
                      +++|.++++++++|||.|+++++||+++..+++++.+++++++.+|+++++||..   .| +|++|||+.++.   ++|.
T Consensus       314 ~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~---~g~~~~~Ptvl~~v~~~~~~~~  390 (501)
T 1uxt_A          314 VEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRR---LGPTYVQPTFVEAPADRVKDMV  390 (501)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCB---CSSSCBCCEEEECCHHHHTTSH
T ss_pred             HHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCCceECCEEEeCCCCCCCcCH
Confidence            9999999999999999999999999999999999999999999999999999875   57 999999999999   9999


Q ss_pred             HHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         341 IAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       341 ~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ++++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+.+
T Consensus       391 i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~  453 (501)
T 1uxt_A          391 LYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMP  453 (501)
T ss_dssp             HHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCC
T ss_pred             HHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEEEeCCC
Confidence            999999999999999999999999999999999999999999999999999999999999873

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=100.00  E-value=1.5e-74  Score=592.59  Aligned_cols=365  Identities=35%  Similarity=0.585  Sum_probs=341.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .|..+++.......+.++.+++++++|+|||..+++. |+..+++.+++++.++++..+...+. .+...++.++|+|||
T Consensus        57 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~-~~~~~~~~~~P~GVv  134 (486)
T 3pqa_A           57 KRYNILMNIAKQIKEKKEELAKILAIDAGKPIKQARV-EVERSIGTFKLAAFYVKEHRDEVIPS-DDRLIFTRREPVGIV  134 (486)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCCEEEECC-TTEEEEEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCceecC-CCceeEEEEccccEE
Confidence            3444555554545566788899999999999999998 99999999999999988776654443 366789999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHh----CCCCCcEEeecCCc-cchhhhhcCCCc
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVVNIVPGYG-DAGAALVQHPGV  184 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~a----glp~~~~~~v~~~~-~~~~~l~~~~~v  184 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++    |+|+|++++++|++ ++++.|+.||++
T Consensus       135 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~GlP~gvv~vv~g~~~~~g~~L~~~p~v  214 (486)
T 3pqa_A          135 GAITPFNFPLNLSAHKIAPAIATGNVIVHHPSSKAPLVCIELAKIIENALKKYNVPLGVYNLLTGAGEVVGDEIVVNEKV  214 (486)
T ss_dssp             EEEECSSSHHHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHHHHHHHHHTTCCGGGEEECCSCTTTHHHHHHHCTTC
T ss_pred             EEECCCchHHHHHHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHhcCCCCCeEEEEeCCchHHHHHHHhCCCc
Confidence            9999999999999999999999999999999999999999999999999    99999999999977 779999999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      |.|+||||+.+|+.|++.++   +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus       215 d~V~fTGS~~~g~~i~~~aa---~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  291 (486)
T 3pqa_A          215 NMISFTGSSKVGELITKKAG---FKKIALELGGVNPNIVLKDADLNKAVNALIKGSFIYAGQVCISVGMILVDESIADKF  291 (486)
T ss_dssp             CEEEEESCHHHHHHHHHHCC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEEGGGHHHH
T ss_pred             cEEEEECChHHHHHHHHHcC---CCceeeccCCcCcEEEcCCCCHHHHHHHHHHHHHhcCCCCccCCcEEEEeHHHHHHH
Confidence            99999999999999999765   799999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++|+++++++++|+|+|+++++||+++..+++++.++|++++.+|+++++||..   .|+|+.|||+ ++.++|.++++
T Consensus       292 ~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl-~v~~~~~i~~e  367 (486)
T 3pqa_A          292 IEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKR---DKALFYPTIL-EVDRDNILCKT  367 (486)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEE-ECCTTSGGGTC
T ss_pred             HHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCC---CCcEeccEEE-eCCCCChhhcc
Confidence            9999999999999999999999999999999999999999999999999999975   5799999999 99999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |+||||++++.|++ +|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       368 EiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~  426 (486)
T 3pqa_A          368 ETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVVINDSSL  426 (486)
T ss_dssp             CCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESSCTT
T ss_pred             cccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEEEeCCCC
Confidence            99999999999999 999999999999999999999999999999999999999999864

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=100.00  E-value=4.6e-74  Score=591.83  Aligned_cols=372  Identities=31%  Similarity=0.466  Sum_probs=341.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||..++.. |+..+++.+++++.+++++.++..+.. .+...+.+++|+||
T Consensus        82 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  160 (500)
T 2j6l_A           82 KRGEIVRQIGDALREKIQVLGSLVSLEMGKILVEGVG-EVQEYVDICDYAVGLSRMIGGPILPSERSGHALIEQWNPVGL  160 (500)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHTTTCCCBEECCSSTTEEEEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCccccccCCCceeEEEEecccE
Confidence            4445555555555566777899999999999999977 999999999999988876656543332 34456788999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHH----hCCCCCcEEeecCCccchhhhhcCCCc
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAE----AGIPEGVVNIVPGYGDAGAALVQHPGV  184 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~----aglp~~~~~~v~~~~~~~~~l~~~~~v  184 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.+    +|+|+|++|+++|+.++++.|+.||++
T Consensus       161 v~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~g~~L~~~~~v  240 (500)
T 2j6l_A          161 VGIITAFNFPVAVYGWNNAIAMICGNVCLWKGAPTTSLISVAVTKIIAKVLEDNKLPGAICSLTCGGADIGTAMAKDERV  240 (500)
T ss_dssp             EEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEEECCSHHHHHHHHHCTTC
T ss_pred             EEEECCCcchhhHHHHHHHHHHHhCCEEEEECCCccHHHHHHHHHHHHHHHHhhcCCcCeEEEEeCCHHHHHHHhcCCCc
Confidence            9999999999999999999999999999999999999999999888764    599999999999944889999999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      |.|.||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus       241 d~I~FTGS~~~g~~i~~~aa-~~l~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f  319 (500)
T 2j6l_A          241 NLLSFTGSTQVGKQVGLMVQ-ERFGRSLLELGGNNAIIAFEDADLSLVVPSALFAAVGTAGQRCTTARRLFIHESIHDEV  319 (500)
T ss_dssp             SEEEEESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEETTTHHHH
T ss_pred             CEEEEECCHHHHHHHHHHhc-cCCCceEEEcCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCcCCCcEEEEcHHHHHHH
Confidence            99999999999999999888 58999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIARE  344 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~  344 (442)
                      +++|++.++++++|+|.|+++++|||++..+++++.+++++++++|+++++||...+..|+|++|||+.++.+++.++++
T Consensus       320 ~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTvl~~v~~~~~i~~e  399 (500)
T 2j6l_A          320 VNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTIVTGLGHDASIAHT  399 (500)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEEEESCCTTCHHHHS
T ss_pred             HHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEEEECCCCcChhhcC
Confidence            99999999999999999999999999999999999999999999999999999764456899999999999999999999


Q ss_pred             hhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhc--cccEeeeEEeeCCH
Q psy5844         345 EIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVT--QGLRAGTLIRFSSI  403 (442)
Q Consensus       345 e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~--~~~~~G~V~vN~~~  403 (442)
                      |+||||++++.|++++|+|+++|+.++||+++|||+|.+++.+++  +++++|.|+||+..
T Consensus       400 EiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~vN~~~  460 (500)
T 2j6l_A          400 ETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVNVNIPT  460 (500)
T ss_dssp             CCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEEESSCT
T ss_pred             cccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEEECCCC
Confidence            999999999999999999999999999999999999999999999  77999999999865

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=4.5e-74  Score=591.03  Aligned_cols=371  Identities=31%  Similarity=0.493  Sum_probs=341.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC--CCcceEEEeeccc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN--GDFFAYTRHEPVG  107 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~G  107 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++..+...+..  .+...+++++|+|
T Consensus        67 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  145 (485)
T 4dng_A           67 DRKAVLQKARGYLHENRDDIIMMIARETGGTIIKSTI-ELEQTIAILDEAMTYTGELGGVKEVPSDIEGKTNKIYRLPLG  145 (485)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCSCEECCCCSSTTEEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhCCeeccccCCCCceEEEEEecce
Confidence            3444444444444555777799999999999999999 999999999999998877766544432  4567899999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHH-HHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCcc
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA-LAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVD  185 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~-~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~  185 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|.++ ..+.++|.++|+|+|++|+++|++ +.++.|+.||+++
T Consensus       146 Vv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~~l~~~l~~aGlP~gvv~vv~g~~~~~~~~L~~~p~v~  225 (485)
T 4dng_A          146 VISSISPFNFPMNLSMRSIAPAIALGNSVVHKPDIQTAISGGTIIAKAFEHAGLPAGVLNVMLTDVKEIGDGMLTNPIPR  225 (485)
T ss_dssp             EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCGGGHHHHTHHHHHHHHHTTCCTTSEEECCCCHHHHTTHHHHCSSCS
T ss_pred             EEEEECCCccHHHHHHHHHHHHHHcCCEEEEECCCcChHHHHHHHHHHHHHhCcCCCeEEEEeCCChhHHHHHHhCCCCC
Confidence            99999999999999999999999999999999999999999 999999999999999999999987 7999999999999


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus       226 ~v~fTGS~~~g~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~  304 (485)
T 4dng_A          226 LISFTGSTAVGRHIGEIAG-RAFKRMALELGGNNPFAVLSDADVDRAVDAAIFGKFIHQGQICMIINRIIVHQDVYDEFV  304 (485)
T ss_dssp             EEEEEECHHHHHHHHHHHH-HHTCEEEEEECCCEEEEECTTSCHHHHHHHHHHHHTTCC----CCEEEEEEEHHHHHHHH
T ss_pred             EEEEECCcHHHHHHHHHHh-hhccchhhhcCCCCceEEcCCCCHHHHHHHHHHHHHhcCCCccccCCEEEEeHHHHHHHH
Confidence            9999999999999999888 589999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++|.++++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||..   .|+|++|||+.++.+++.++++|
T Consensus       305 ~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~---~g~~~~Ptvl~~v~~~~~i~~eE  381 (485)
T 4dng_A          305 EKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKR---VGNVLTPYVFVGADNNSKIAQTE  381 (485)
T ss_dssp             HHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCE---ETTEECCEEEESCCTTSHHHHCC
T ss_pred             HHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCC---CCcEECCEEEecCCCCChhhcCc
Confidence            999999999999999999999999999999999999999999999999999975   68999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      +||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|++...
T Consensus       382 ~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~~~~  441 (485)
T 4dng_A          382 LFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTHVNDQSVN  441 (485)
T ss_dssp             CCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEEESCC---
T ss_pred             cccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEEECCCCCC
Confidence            999999999999999999999999999999999999999999999999999999998643

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=100.00  E-value=8.1e-74  Score=591.03  Aligned_cols=370  Identities=34%  Similarity=0.524  Sum_probs=342.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC--CCcceEEEeeccc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN--GDFFAYTRHEPVG  107 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~P~G  107 (442)
                      .+..+++.......+.++.+++++++|+|||..+++. |+..+++.+++++.++++..+ ..+..  .+...++.++|+|
T Consensus        73 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~-~~~~~~~~~~~~~~~~~P~G  150 (508)
T 3r64_A           73 ERSAIIYRAAELLEEHREEIVEWLIKESGSTRSKANL-EITLAGNITKESASFPGRVHG-RISPSNTPGKENRVYRVAKG  150 (508)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHTSCCCHHHHHH-HHHHHHHHHHHHTTSTTTCCE-EEECCSSTTEEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHcCCCHHHHHH-HHHHHHHHHHHHHHHhhhhcC-cccccCCCCceeEEEEecce
Confidence            3444444444444556777899999999999999999 999999999999988876655 43332  4567899999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHH-HHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCcc
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTA-LAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVD  185 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~-~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~  185 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|.++ ..++++|.++|+|+|++++++|++ +.++.|+.||+++
T Consensus       151 Vv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~~l~~ll~~aGlP~gvv~vv~g~~~~~g~~L~~~p~vd  230 (508)
T 3r64_A          151 VVGVISPWNFPLNLSIRSVAPALAVGNAVVIKPASDTPVTGGVIPARIFEEAGVPAGVISTVAGAGSEIGDHFVTHAVPK  230 (508)
T ss_dssp             EEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCHHHHTHHHHHHHHTTTCCTTTEEECCCCTTTTHHHHHHCSSCS
T ss_pred             EEEEECCCcchHHHHHHHHHHHHhcCCEEEEECCCCChHHHHHHHHHHHHHhCcCcCeEEEEeCCCHHHHHHHhhCCCcc
Confidence            99999999999999999999999999999999999999999 999999999999999999999986 8999999999999


Q ss_pred             EEeecCCHHHHHHHHhhccCC--CCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGAS--NLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDE  263 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~  263 (442)
                      .|.||||+.+|+.|++.++ .  ++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+
T Consensus       231 ~I~fTGS~~~g~~i~~~aa-~~~~l~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~  309 (508)
T 3r64_A          231 LISFTGSTPVGRRVGELAI-NGGPMKTVALELGGNAPFVVLADADIDAAAQAAAVGAFLHQGQICMSINRVIVDAAVHDE  309 (508)
T ss_dssp             EEEEESCHHHHHHHHHHHH-SSSSCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTSTTCTTTCCSEEEEEHHHHHH
T ss_pred             EEEEECCHHHHHHHHHHhh-cccCCCceEeecCCcCceEECCCCCHHHHHHHHHHHHHhcCCCCcccCcEEEEehhHHHH
Confidence            9999999999999999887 5  789999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHH
Q psy5844         264 FVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       264 f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      |+++|.++++++++|+|.|+++++||+++..+++++.+++++++.+|+++++||..   .|+|+.|||+.++.+++.+++
T Consensus       310 f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~---~g~~~~Ptvl~~v~~~~~i~~  386 (508)
T 3r64_A          310 FLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPI---EGRLVHPHVFSDVTSDMEIAR  386 (508)
T ss_dssp             HHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCE---ETTEECCEEEEEECTTSGGGT
T ss_pred             HHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCC---CCcEEecEEEecCCCCChhhc
Confidence            99999999999999999999999999999999999999999999999999999975   689999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      +|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+....
T Consensus       387 eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~~~~  448 (508)
T 3r64_A          387 EEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVHINDLTVN  448 (508)
T ss_dssp             SCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEEECC----
T ss_pred             ccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEEEcCCCCC
Confidence            99999999999999999999999999999999999999999999999999999999998643

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=100.00  E-value=2.8e-73  Score=584.09  Aligned_cols=368  Identities=33%  Similarity=0.568  Sum_probs=339.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.++++.......+.++.+++++++|+|||..+++..|+..+++.+++++..+++..+..    .+...++.++|+|||
T Consensus        68 ~R~~~L~~~a~~l~~~~~~la~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~----~~~~~~~~~~P~GVv  143 (478)
T 3ty7_A           68 ERQALLDKIVKEYENRKDDIVQAITDELGAPLSLSERVHYQMGLNHFVAARDALDNYEFEE----RRGDDLVVKEAIGVS  143 (478)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHHHHCCSEE----EETTEEEEEEECCCE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhccc----CCccceEEecCceEE
Confidence            3444555554444556777899999999999999943499999999999998887765532    123578999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+++|++ ++++.|+.||+++.|.
T Consensus       144 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~~~~~aGlP~gvv~vv~g~~~~~~~~L~~~~~v~~v~  223 (478)
T 3ty7_A          144 GLITPWNFPTNQTSLKLAAAFAAGSPVVLKPSEETPFAAVILAEIFDKVGVPKGVFNLVNGDGAGVGNPLSEHPKVRMMS  223 (478)
T ss_dssp             EEECCSSSTTHHHHHHHHHHHHHTCCEEEECCTTSCHHHHHHHHHHHHHTCCTTTEEECCCCTTTTHHHHHHCTTCCEEE
T ss_pred             EEECCCcchHHHHHHHHHHHHHcCCeEEEECCCcchHHHHHHHHHHHHhCcCcCeEEEEECCChHHHHHHHhCCCcCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999977 8999999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       224 fTGS~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~~~GQ~C~a~~rvlV~~~i~d~f~~~l  302 (478)
T 3ty7_A          224 FTGSGPTGSKIMEKAA-KDFKKVSLELGGKSPYIVLDDVDIKEAAKATTGKVVNNTGQVCTAGTRVLVPNKIKDAFLAEL  302 (478)
T ss_dssp             ECSCHHHHCC--CSTT-TTTCEEECCCCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCCCEEEEETTTHHHHHHHH
T ss_pred             EECcHHHHHHHHHHHH-hcCCceEEecCCCCCcccCCCCCHHHHHHHHHHHHHHhCCCCccCCCeEEEcHHHHHHHHHHH
Confidence            9999999999999888 689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc-C--CCCcccccceeccCcchhHHHHHh
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA-G--DKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~-~--~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      .++++++++|+|.|+++++||+++..+++++.+++++++++|+++++||... +  ..|+|++|||+.++.+++.++++|
T Consensus       303 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~~Ptvl~~v~~~~~~~~eE  382 (478)
T 3ty7_A          303 KEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFARPTIFINVDNQMTIAQEE  382 (478)
T ss_dssp             HHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCCCCEEEESCCTTSHHHHSC
T ss_pred             HHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCceeCCEEEecCCCCCcccCce
Confidence            9999999999999999999999999999999999999999999999999432 2  468999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCC
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS  402 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~  402 (442)
                      +||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+.
T Consensus       383 ~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~vN~~  439 (478)
T 3ty7_A          383 IFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVEINEA  439 (478)
T ss_dssp             CCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEEETTC
T ss_pred             eECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEEECCC
Confidence            999999999999999999999999999999999999999999999999999999984

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=100.00  E-value=1.2e-73  Score=587.33  Aligned_cols=371  Identities=32%  Similarity=0.545  Sum_probs=342.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc-cCCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.+.+...++..+ ...+...+++++|+||
T Consensus        66 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~~~~~~~~P~GV  144 (486)
T 1t90_A           66 RRARILFNFQQLLSQHKEELAHLITIENGKNTKEALG-EVGRGIENVEFAAGAPSLMMGDSLASIATDVEAANYRYPIGV  144 (486)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHTTHHHHHCEEEEEEEETTEEEEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCcccccCCCCceeEEEecccCE
Confidence            4445555555555566788899999999999999987 9999999999998766666555432 1245567899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEe
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVA  188 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~  188 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|+.+.++.|+.||+++.|.
T Consensus       145 V~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~I~  224 (486)
T 1t90_A          145 VGGIAPFNFPMMVPCWMFPMAIALGNTFILKPSERTPLLTEKLVELFEKAGLPKGVFNVVYGAHDVVNGILEHPEIKAIS  224 (486)
T ss_dssp             EEEECCSSCTTHHHHHHHHHHHHTTCEEEEECCSSSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTEEEEE
T ss_pred             EEEECCCchhHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHHhCCCCCEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999558899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCE-EEEcCccHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSR-TFVQDTIYDEFVAR  267 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~-v~V~~~~~~~f~~~  267 (442)
                      ||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++| ||||++ +|+|+++
T Consensus       225 fTGS~~~g~~i~~~aa-~~~~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvv~v~~~-~d~f~~~  302 (486)
T 1t90_A          225 FVGSKPVGEYVYKKGS-ENLKRVQSLTGAKNHTIVLNDANLEDTVTNIVGAAFGSAGERCMACAVVTVEEGI-ADEFMAK  302 (486)
T ss_dssp             EESCHHHHHHHHHHHH-HTTCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHH-HHHHHHH
T ss_pred             EeCCHHHHHHHHHHHh-ccCCcEEeccCCCCcEEECCCCCHHHHHHHHHHHHHhCCCCCcccCCeeEEecCC-HHHHHHH
Confidence            9999999999999888 589999999999999999999999999999999999999999999999 999999 9999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-CCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |+++++++++|+|.++++++||+++..+++++.+++++++.+|+++++||...+ ..|+|+.|||+.++.+++.++++|+
T Consensus       303 l~~~~~~~~vG~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~~v~~~~~~~~eEi  382 (486)
T 1t90_A          303 LQEKVADIKIGNGLDDGVFLGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFDNVTTEMTIWKDEI  382 (486)
T ss_dssp             HHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEESCCTTSHHHHSCC
T ss_pred             HHHHHHhcccCCCCccCCccCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEeCCCCCCHhhcCcc
Confidence            999999999999999999999999999999999999999999999999997432 3689999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      ||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+..
T Consensus       383 FGPvl~v~~~~~~~eai~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~  439 (486)
T 1t90_A          383 FAPVLSVIRVKNLKEAIEIANKSEFANGACLFTSNSNAIRYFRENIDAGMLGINLGV  439 (486)
T ss_dssp             CSSEEEEEEESSHHHHHHHHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEEESCSC
T ss_pred             cCceEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEEECCCC
Confidence            999999999999999999999999999999999999999999999999999999853

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=100.00  E-value=3.1e-73  Score=584.70  Aligned_cols=372  Identities=28%  Similarity=0.372  Sum_probs=343.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .+.++++.......+.++.+++++++|+|||+.+++. |+..+++.+++++...++..+...+...+...+++++|+|||
T Consensus        65 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  143 (490)
T 3ju8_A           65 QRIELLERFAATLKSRADELARVIGEETGKPLWESAT-EVTSMVNKVAISVQAFRERTGEKSGPLADATAVLRHKPHGVV  143 (490)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHHSCCEEEEETTEEEEEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCeeeEEECCCCEE
Confidence            3444555554444556777899999999999999997 999999999999988877655543222344567789999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+.+.++.|+.||+++.|.|
T Consensus       144 ~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aGlP~gvv~vv~g~~~~~~~L~~~~~v~~V~f  223 (490)
T 3ju8_A          144 AVFGPYNFPGHLPNGHIVPALLAGNCVVFKPSELTPKVAELTLKAWIQAGLPAGVLNLVQGGRETGVALAAHRGLDGLFF  223 (490)
T ss_dssp             EEECCSSSTTHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHTTCCTTTEEECCCSHHHHHHHHTCTTCSEEEE
T ss_pred             EEECCCcchHHHHHHHHHHHHHcCCeEEEECCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCHHHHHHHHhCCCcCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999996589999999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCcee-eeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCcc-HHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRT-TLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTI-YDEFVAR  267 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~-~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~-~~~f~~~  267 (442)
                      |||+.+|+.|++.++ .+++|+ ++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||+++ +|+|+++
T Consensus       224 TGS~~~g~~i~~~aa-~~~~~v~~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~~i~d~f~~~  302 (490)
T 3ju8_A          224 TGSSRTGNLLHSQFG-GQPQKILALEMGGNNPLVVEEVADLDAAVYTIIQSAFISAGQRCTCARRLLVPQGAWGDALLAR  302 (490)
T ss_dssp             ESCHHHHHHHHHHTT-TCTTSEEEEECCCCEEEEECCCSCHHHHHHHHHHHHHGGGGCSTTSEEEEEEESSHHHHHHHHH
T ss_pred             ECcHHHHHHHHHHhh-ccCCCcEEeecCCCCeEEECCCCCHHHHHHHHHHHHHhcCCCCCcCCCEEEEECCccHHHHHHH
Confidence            999999999999988 588998 7999999999999999999999999999999999999999999999996 9999999


Q ss_pred             HHHHHhhcccCC-CCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGD-PFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~-p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |+++++++++|+ |.|+++++||+++..+++++.+++++++.+|+++++||...+..|+|++|||+. +.+++.++++|+
T Consensus       303 l~~~~~~~~~G~~~~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~-v~~~~~i~~eEi  381 (490)
T 3ju8_A          303 LVAVSATLRVGRFDEQPAPFMGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD-VSAVAERPDEEF  381 (490)
T ss_dssp             HHHHHHHCCBCCTTCSSCCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE-CTTCSSCCCCCC
T ss_pred             HHHHHHhccCCCCCCCCcCccccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE-eCCCCccccccc
Confidence            999999999999 999999999999999999999999999999999999998766689999999999 999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+...
T Consensus       382 FGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~  439 (490)
T 3ju8_A          382 FGPLLQVIRYSDFAAAIREANATQYGLAAGLLSDSRERFEQFLVESRAGIVNWNKQLT  439 (490)
T ss_dssp             CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEEESSCSS
T ss_pred             cccEEEEEEeCCHHHHHHHHhcCCCCceEEEEcCCHHHHHHHHHhcCcceEEECCCcC
Confidence            9999999999999999999999999999999999999999999999999999998753

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=100.00  E-value=1.8e-73  Score=584.77  Aligned_cols=366  Identities=33%  Similarity=0.515  Sum_probs=340.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CC----cce-EEEe
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GD----FFA-YTRH  103 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~-~~~~  103 (442)
                      .+.++++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.++++..++..+.+ .+    ... ++.+
T Consensus        63 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  141 (475)
T 1euh_A           63 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRR  141 (475)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHHhcCCcccCCCCCccccceeeEEEE
Confidence            4445555555555556778899999999999999987 999999999999998877666543332 34    456 8999


Q ss_pred             eccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCC
Q psy5844         104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHP  182 (442)
Q Consensus       104 ~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~  182 (442)
                      +|+|||++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+++|++ +.++.|+.||
T Consensus       142 ~P~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~ll~~aGlP~gvv~vv~g~~~~~~~~L~~~~  221 (475)
T 1euh_A          142 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQ  221 (475)
T ss_dssp             EECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCT
T ss_pred             eccceEEEECCCCchHHHHHHHHHHHHHcCCEEEEeCCCcChHHHHHHHHHHHHhCCCcCeEEEEeCCcHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999976 7899999999


Q ss_pred             CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         183 GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       183 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      +++.|.||||+.+|+.|++.++   +||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|
T Consensus       222 ~v~~V~fTGS~~~g~~i~~~aa---~~~v~lElGGk~p~iV~~dADl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d  298 (475)
T 1euh_A          222 AVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD  298 (475)
T ss_dssp             TCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHH
T ss_pred             CcCEEEEECchHHHHHHHHhcC---CCcEEEEcCCcCeEEECCCCCHHHHHHHHHHHHhhcCCCcCCCCcEEEEehhHHH
Confidence            9999999999999999999765   8999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +|+++|+++++++++|+|.| ++++||+++..+++++.+++++++++|+++++||..   .|+|++|||+.++.+++.++
T Consensus       299 ~f~~~l~~~~~~~~~g~p~~-~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~---~g~~~~Ptvl~~v~~~~~~~  374 (475)
T 1euh_A          299 ELVEKIREKVLALTIGNPED-DADITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLA  374 (475)
T ss_dssp             HHHHHHHHHHHTSCBSCGGG-TCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCE---ETTEECCEEEESCCTTSGGG
T ss_pred             HHHHHHHHHHHhccCCCccc-cCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcc---CCceeCCEEEeCCCCcCHHH
Confidence            99999999999999999999 999999999999999999999999999999999875   58999999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeC-CH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFS-SI  403 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~-~~  403 (442)
                      ++|+||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+ +.
T Consensus       375 ~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~vN~~~~  436 (475)
T 1euh_A          375 WEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQ  436 (475)
T ss_dssp             TSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCC
T ss_pred             cCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEEECCCCC
Confidence            99999999999999999999999999999999999999999999999999999999998 54

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=100.00  E-value=3.4e-73  Score=589.96  Aligned_cols=379  Identities=26%  Similarity=0.374  Sum_probs=343.4

Q ss_pred             ccCCCCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc-cCCCcceEEE
Q psy5844          24 AVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTR  102 (442)
Q Consensus        24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~  102 (442)
                      .++...|...+++.+..+..+|++.++.++++|+|||+.+++.+|+.++++.+++++.+++++.+.... .+.+...+.+
T Consensus       118 ~~~~~~R~~iL~~~a~~l~~~~~~el~~~~~~e~Gk~~~ea~~e~v~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~  197 (563)
T 4e3x_A          118 LKPMADRAQVFLKAADMLSGPRRAEVLAKTMVGQGKTVIQAEIDAAAELIDFFRFNAKFAVELEGEQPISVPPSTNHTVY  197 (563)
T ss_dssp             HSCHHHHHHHHHHHHHHHHTTTHHHHHHHHHHHHCCCHHHHHHHTTHHHHHHHHHHHHHHHHHTTCCCCCCTTEEEEEEC
T ss_pred             cCCHHHHHHHHHHHHHHHHhccHHHHHHHHHHHcCCCHHHHhHHHHHHHHHHHHHHHHHHHHhhCCCccCCCCCcceEEE
Confidence            334334455555555567777789999999999999999998833999999999999998877653221 1123445677


Q ss_pred             eeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcC
Q psy5844         103 HEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQH  181 (442)
Q Consensus       103 ~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~  181 (442)
                      +.|+|||++|+|||||+....+++++|| +||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++ ++++.|+.|
T Consensus       198 r~p~GVV~~I~PwNfP~~~~~~~~apAL-aGNtVVlKPs~~tp~sa~~l~~ll~eAGlP~Gvvnvv~g~g~~~g~~L~~h  276 (563)
T 4e3x_A          198 RGLEGFVAAISPFNFTAIGGNLAGAPAL-MGNVVLWKPSDTAMLASYAVYRILREAGLPPNIIQFVPADGPTFGDTVTSS  276 (563)
T ss_dssp             CBCSSEEEEECCSSCHHHHHHHHHHHHH-TTCCEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHTTC
T ss_pred             ecCceEEEEECCchHHHHHHHHHHHHhh-cCCEEEEECCCCChHHHHHHHHHHHHhCCCCCeEEEEeCCcHHHHHHHHhC
Confidence            8888999999999999999999999999 69999999999999999999999999999999999999987 889999999


Q ss_pred             CCccEEeecCCHHHHHHHHhhccCCCCc------eeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEE
Q psy5844         182 PGVDKVAFTGSTEVGKLVQQGSGASNLK------RTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTF  255 (442)
Q Consensus       182 ~~v~~v~ftGs~~~~~~i~~~~~~~~~~------~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~  255 (442)
                      |+++.|.||||+.+|+.|++.++ .+++      |+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||
T Consensus       277 p~v~~I~FTGSt~vG~~i~~~aa-~~lk~~~~~prv~lElGGk~p~IV~~dADld~Aa~~iv~~~f~~~GQ~C~A~~rv~  355 (563)
T 4e3x_A          277 EHLCGINFTGSVPTFKHLWRQVA-QNLDRFRTFPRLAGECGGKNFHFVHSSADVDSVVSGTLRSAFEYGGQKCSACSRLY  355 (563)
T ss_dssp             TTEEEEEEESCHHHHHHHHHHHH-HTTTTCSSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEE
T ss_pred             CCcCEEEEECCHHHHHHHHHHHH-hhCCccccCCceeccCCCCCceeeCCCCCHHHHHHHHHHHHHhcCCCCCcCCcEEE
Confidence            99999999999999999999888 4666      5999999999999999999999999999999999999999999999


Q ss_pred             EcCccHHHHHHHHHHHHhhcccCCC-CCCCCccCcCCCHHHHHHHHHHHHHHHh-cCCEEEeCCcccCCCCcccccceec
Q psy5844         256 VQDTIYDEFVARSGERAKRRTVGDP-FDLNVEQGPQIDKEQMDKILEFIESGKS-QGAQLVAGGGRAGDKGFYVQPTVFA  333 (442)
Q Consensus       256 V~~~~~~~f~~~l~~~~~~~~~g~p-~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~v~pti~~  333 (442)
                      ||++++|+|+++|+++++++++||| .|+++++||+++..+++++.++|++++. .|+++++||...+..|+|++|||+.
T Consensus       356 V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~PTvl~  435 (563)
T 4e3x_A          356 VPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEPCIIE  435 (563)
T ss_dssp             EEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECCEEEE
T ss_pred             EecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecCEEEe
Confidence            9999999999999999999999999 9999999999999999999999999996 7999999998766689999999999


Q ss_pred             cCcchhHHHHHhhcCCcccccccCC--HHHHHHHH-hcCCCCceEEEecCCCChhhhhccccE--eeeEEeeCCHH
Q psy5844         334 NVRDDMKIAREEIFGPVQQLIRFSS--IEEVIERA-NNSDYGLAAAVFTKDLDKTNYVTQGLR--AGTLIRFSSIE  404 (442)
Q Consensus       334 ~~~~~~~~~~~e~fgPvl~v~~~~~--~~eai~~a-n~~~~gl~~~v~s~d~~~~~~~~~~~~--~G~V~vN~~~~  404 (442)
                      ++.+++.++++|+||||++++.|++  ++|+|+++ |+++|||+++|||+|.+.+.+++++++  +|+|+||+...
T Consensus       436 ~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~IN~~~~  511 (563)
T 4e3x_A          436 SKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFYINDKST  511 (563)
T ss_dssp             ESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEEESSCSC
T ss_pred             cCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEEEcCCCC
Confidence            9999999999999999999999997  79999999 789999999999999999999999865  99999998754

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=100.00  E-value=7.4e-72  Score=609.81  Aligned_cols=374  Identities=32%  Similarity=0.491  Sum_probs=346.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-CCCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-NGDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~P~Gv  108 (442)
                      .+..+++.......++++.++.++++|+|||+.++.. |+..+++.++|++.+++++.+..... ..+..+++.++|+||
T Consensus       591 eRa~iL~~~Adll~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~aid~lr~~a~~~~~~~~~~~~~~~~g~~~~~~~~PlGV  669 (1026)
T 4f9i_A          591 TRAEYLLKAAQAARKRLFELSAWQVLEIGKQWDQAYA-DVTEAIDFLEYYAREMIRLGQPQRVGHAPGELNHYFYEPKGV  669 (1026)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHTSCEEECCCTTEEEEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhhHHH-HHHHHHHHHHHHHHHHHHhcCCccccCCCCccceeEeecCce
Confidence            3444555554444567788899999999999999998 99999999999999988775543322 256678899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..++++|.++|+|+|++|+|+|++ ++++.|+.||+++.|
T Consensus       670 V~~I~PwNfPl~i~~~~~a~ALaaGNtVVlKPse~tplsa~~l~ell~eAGlP~gvvnvV~G~g~~vg~~L~~hp~v~~V  749 (1026)
T 4f9i_A          670 AAVIAPWNFPLAISMGMASAAIVTGNCVVFKPSGITSIIGWHLVELFREAGLPEGVFNFTPGRGSVMGDYLVDHPDISLI  749 (1026)
T ss_dssp             EEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCTTSEEECCCCHHHHHHHHHHCTTEEEE
T ss_pred             EEEeCCCccHHHHHHHHHHHHHHcCCEEEEEcCccchHHHHHHHHHHHHhCcCCCeEEEEecCcHHHHHHHHhCCCCCEE
Confidence            9999999999999999999999999999999999999999999999999999999999999987 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccC-----CCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         188 AFTGSTEVGKLVQQGSGA-----SNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      +||||+.+|+.|++.+++     +++||+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|+|||++++|
T Consensus       750 ~FTGSt~vg~~I~~~aa~~~~~~~~lkpv~lElGGknp~IV~~dADld~Aa~~iv~saf~~aGQ~C~A~~rl~V~~~i~d  829 (1026)
T 4f9i_A          750 AFTGSMETGLRIIERAAKVHPGQANVKKIISEMGGKNAIIIDDDADLDEAVPHVLYSAFGFQGQKCSACSRVIVLDAVYD  829 (1026)
T ss_dssp             EEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHH
T ss_pred             EeCCCHHHHHHHHHHhhcccccccCccceEEecCCCCeEEECCCCCHHHHHHHHHHHHHhCCCCCCCCCceEEecHHHHH
Confidence            999999999999998873     368999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +|+++|++.++++++|+|.|+++++||+++..+++++.++|++++.+| ++++||...+..|+|+.|||+.++.+++.++
T Consensus       830 ~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G-~~v~gG~~~~~~G~fv~PTvl~~v~~~~~i~  908 (1026)
T 4f9i_A          830 KFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREG-HVLYESPVPAGEGYFVPMTIIGGIKPEHRIA  908 (1026)
T ss_dssp             HHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHS-EEEEECCCCSSSSCCCCCEEEESCCTTSGGG
T ss_pred             HHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCC-eEEecCCcCCCCCceecceeeecCCCCcccc
Confidence            999999999999999999999999999999999999999999999999 9999987654459999999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      ++|+||||++++.|++++|+|+++|+++|||+++|||+|.+.+.++++++++|+|+||+....
T Consensus       909 ~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~IN~~~~~  971 (1026)
T 4f9i_A          909 QEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLYINRNNTG  971 (1026)
T ss_dssp             TSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred             CceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEEEcCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999997654

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=100.00  E-value=4.6e-72  Score=574.12  Aligned_cols=372  Identities=27%  Similarity=0.417  Sum_probs=339.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc-ccC-CCcceEEEeeccc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-PIN-GDFFAYTRHEPVG  107 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-~~~-~~~~~~~~~~P~G  107 (442)
                      .|..+++.......+.++.+++++++|+||+. ++.. |+..+++.+++++..+.+...... ... .+...+..++|+|
T Consensus        51 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~-~~~~-ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  128 (474)
T 4h7n_A           51 GRITTLQQWKQAILSRREQLTEALVNDTGRLS-ITVL-EIDSFLASIDRWCGLAPELLQTSAKNTSIPFIALQQSLVPYP  128 (474)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHHSCSH-HHHH-HHHHHHHHHHHHHHHHHHHHCCEEEECSSTTEEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHcCCcH-HHHH-HHHHHHHHHHHHHhhhhhcccccccCCCCCCccceEEEEecc
Confidence            34455555545455567888999999999985 4456 999999999999988766544322 222 4556678889999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEE
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKV  187 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v  187 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+|++++++|+.+.+..|+.|  ++.|
T Consensus       129 Vv~~I~PwNfP~~~~~~~~~~ALaaGN~VVlKps~~tp~~~~~l~~~~~~ag~p~gv~~~v~g~~~~~~~l~~~--v~~v  206 (474)
T 4h7n_A          129 LVGVISPWNFPLTLSMIDTIPALLAGCAVVVKPSEIAPRFVAPLLMALNTVPELRDVLIFVEGGGETGANLINY--VDFV  206 (474)
T ss_dssp             EEEEEECSSSHHHHHHTTHHHHHHHTCEEEEEECTTSCTTHHHHHHHHTTCTTTTTTEEECCCCHHHHHHHHTT--CSEE
T ss_pred             EEEEECCCCcHHHHHhcccCcchhcCCceeecccccCchHHHHHHhhhhhhcccccceeeccccchhhhhhhhc--cceE
Confidence            99999999999999999999999999999999999999999999999999999999999999977888899876  8999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|++.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+++
T Consensus       207 ~FTGS~~~G~~i~~~aa-~~~~~v~lElGGk~p~iV~~dAdl~~aa~~i~~~~~~n~GQ~C~a~~rv~V~~~i~d~f~~~  285 (474)
T 4h7n_A          207 CFTGSVATGREVAETAA-RRFIPAYLELGGKDPAIVLESANLELATSAILWGAVVNTGQSCLSIERIYVAESKFEEFYHQ  285 (474)
T ss_dssp             EEESCHHHHHHHHHHHH-HHTCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEGGGHHHHHHH
T ss_pred             Eeccccchhhhhhhhhh-cccccccccCCCcCccccCchhhHHHHHHHHHhhhccCCCCceeecccccchHHHHHHHHHH
Confidence            99999999999999888 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC-CCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG-DKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~-~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |.+..+++++|+|.++++++||+++..+.+++.+++++++.+|+++++||...+ ..|+|+.|||+.++.+++.++++|+
T Consensus       286 l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Ptv~~~v~~~~~i~~eEi  365 (474)
T 4h7n_A          286 LIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPTVMTNVNHSMKVMTEET  365 (474)
T ss_dssp             HHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCEEEESCCTTSGGGTSCC
T ss_pred             HHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCceeEEeeccccccccccc
Confidence            999999999999999999999999999999999999999999999999987643 4689999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV  406 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a  406 (442)
                      ||||++++.|++++|+|+++|+++|||+++|||+|.+++.++++++++|+|+||+....+
T Consensus       366 FGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~iN~~~~~~  425 (474)
T 4h7n_A          366 FGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAISINDAALTA  425 (474)
T ss_dssp             CSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEEESSSCGGG
T ss_pred             cCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEECCCCccC
Confidence            999999999999999999999999999999999999999999999999999999876543

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=100.00  E-value=1.8e-71  Score=567.78  Aligned_cols=365  Identities=25%  Similarity=0.381  Sum_probs=331.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcc-c---ccCCCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKT-I---PINGDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~-~---~~~~~~~~~~~~~P  105 (442)
                      .|..+++.......+.++.+++++++|+|||+.++...|+..+++.+++++.......... .   ....+...++.++|
T Consensus        41 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  120 (469)
T 3sza_A           41 FRIQQLEALQRLIQEQEQELVGALAADLHKNEWNAYYEEVVYVLEEIEYMIQKLPEWAADEPVEKTPQTQQDELYIHSEP  120 (469)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTTHHHHHHHHHHHHHHHHHHHSCEECCCCGGGTTSEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccCccccCCCccceeeccC
Confidence            4445555555555667788899999999999999985599999999998876654332211 1   11134567899999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD  185 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~  185 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+++....|+.| ++|
T Consensus       121 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~vVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~ll~~-~vd  198 (469)
T 3sza_A          121 LGVVLVIGTWNYPFNLTIQPMVGAIAAGNAVVLKPSELSENMASLLATIIPQY-LDKDLYPVINGGVPETTELLKE-RFD  198 (469)
T ss_dssp             CSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTSHHHHHHHHHHHHHH-SCTTTSCBCCCSHHHHHHHTTS-CCS
T ss_pred             CCEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCcceEEEEECCHHHHHHHHhc-CCC
Confidence            99999999999999999999999999999999999999999999999999998 9999999999976666677777 799


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|+||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus       199 ~I~FTGS~~vG~~i~~~aa-~~lkpv~lELGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~  277 (469)
T 3sza_A          199 HILYTGSTGVGKIIMTAAA-KHLTPVTLELGGKSPCYVDKNCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIV  277 (469)
T ss_dssp             EEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECTTSCHHHHHHHHHHHHHGGGGCCTTSCCEEEECGGGHHHHH
T ss_pred             EEEEECCHHHHHHHHHHHh-hccCceEEecCCCCceEECCCCCHHHHHHHHHHHHHhcCCCCCCCCcEEEEehhHHHHHH
Confidence            9999999999999999988 689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++|+++++++ +|+|.++++++||+++..+++++.+++     +|+++++||... ..|+|+.|||+.++.++|.++++|
T Consensus       278 ~~l~~~~~~~-~g~~~~~~~~~gpli~~~~~~rv~~~i-----~ga~v~~GG~~~-~~g~~~~PTvl~~v~~~~~i~~eE  350 (469)
T 3sza_A          278 EKLKKSLKEF-YGEDAKKSRDYGRIISARHFQRVMGLI-----EGQKVAYGGTGD-AATRYIAPTILTDVDPQSPVMQEE  350 (469)
T ss_dssp             HHHHHHHHHH-HCSCGGGCTTCCCCSCHHHHHHHHHHH-----TTSEEEECCCEE-TTTTEECCEEEESCCTTSGGGTSC
T ss_pred             HHHHHHHHHh-cCCCCcccCcccccCCHHHHHHHHHHH-----cCCEEEeCCccC-CCCceeCCeeecCCCCcchhhhcc
Confidence            9999999998 699999999999999999999999998     589999999764 468999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +||||+++..|++++|+|+++|+.++||+++|||+|.+++.++++++++|.|+||+...
T Consensus       351 iFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~vN~~~~  409 (469)
T 3sza_A          351 IFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVAANDVIV  409 (469)
T ss_dssp             CCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEEESCSSG
T ss_pred             ccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEEEeCCCC
Confidence            99999999999999999999999999999999999999999999999999999999753

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=100.00  E-value=1.7e-69  Score=552.73  Aligned_cols=363  Identities=28%  Similarity=0.389  Sum_probs=330.8

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc-ccccC---CCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPIN---GDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~~---~~~~~~~~~~P  105 (442)
                      .+..+++.......+.++.+++++++|+|||..+++..|+..+++.+++++..+++..+. ....+   .+...++.++|
T Consensus        51 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  130 (457)
T 3lns_A           51 FRKQSLERLKEAVINNKEALYSALAEDLGKPKDVVDLAEIGAVLHEIDFALAHLDEWVAPVSVPSPDIIAPSECYVVQEP  130 (457)
T ss_dssp             HHHHHHHHHHHHHHTTHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHTSCEEECCCGGGCSCEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccccCCCcceEEEeec
Confidence            455555555555556678889999999999999998449999999999999887665432 12111   34568999999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD  185 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~  185 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++ +|+|++|+++|+.+.+..|+. +++|
T Consensus       131 ~GVv~~I~PwN~P~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~a-lP~gvv~vv~g~~~~~~~L~~-~~vd  208 (457)
T 3lns_A          131 YGVTYIIGPFNYPVNLTLTPLIGAIIGGNTCIIKPSETTPETSAVIEKIIAEA-FAPEYVAVIQGGRDENSHLLS-LPFD  208 (457)
T ss_dssp             CCEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHH-CCTTTEEECCCCHHHHHHHTT-SCCS
T ss_pred             ceEEEEECCCcchHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHh-CCHhhEEEecCCHHHHHHHhc-CCCC
Confidence            99999999999999999999999999999999999999999999999999999 999999999995588899998 6899


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|.||||+.+|+.|++.++ +++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+
T Consensus       209 ~V~fTGS~~~G~~i~~~aa-~~l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~GQ~C~a~~rvlV~~~i~d~f~  287 (457)
T 3lns_A          209 FIFFTGSPNVGKVVMQAAA-KHLTPVVLELGGKCPLIVLPDADLDQTVNQLMFGKFINSGQTXIAPDYLYVHYSVKDALL  287 (457)
T ss_dssp             EEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCEEEEECTTCCHHHHHHHHHHHHHGGGGCCTTSEEEEEEEGGGHHHHH
T ss_pred             EEEEECCHHHHHHHHHHHh-hccCceEEECCCCCCCeECCCCCHHHHHHHHHHHHHHhCCCCccCCceEEEcHHHHHHHH
Confidence            9999999999999999988 689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++|++++++++   |.++  ++||+++..+++++.++++++   ++++++||... ..|+|+.|||+.++.+++.++++|
T Consensus       288 ~~l~~~~~~~~---p~~~--~~gpli~~~~~~rv~~~i~~a---~~~~~~gg~~~-~~g~~~~Ptvl~~v~~~~~i~~eE  358 (457)
T 3lns_A          288 ERLVERVKTEL---PEIN--STGKLVTERQVQRLVSLLEAT---QGQVLVGSQAD-VSKRALSATVVDGVEWNDPLMSEE  358 (457)
T ss_dssp             HHHHHHHHHHC---CSTT--TTCCCSSHHHHHHHHHHHHHC---CSEEEECCCEE-GGGTEECCEEEESCCTTSGGGSSC
T ss_pred             HHHHHHHHhcC---CCcc--cccCCCCHHHHHHHHHHHHhc---CCeEEeCCccC-CCCceeCCEEEecCCCCChhhcCc
Confidence            99999999987   6766  999999999999999999875   35899998753 368999999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhc-CCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANN-SDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~-~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +||||+++..|++++|+|+++|+ .++||+++|||+|.+.+.++++++++|.|+||++..
T Consensus       359 iFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~vN~~~~  418 (457)
T 3lns_A          359 LFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQVNGVML  418 (457)
T ss_dssp             CCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEEESCCSG
T ss_pred             ccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEEEcCCCC
Confidence            99999999999999999999999 999999999999999999999999999999999754

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=100.00  E-value=1.8e-69  Score=562.18  Aligned_cols=368  Identities=23%  Similarity=0.314  Sum_probs=326.2

Q ss_pred             CCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcC-------cccccC-CC-cceEE
Q psy5844          31 KPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHG-------KTIPIN-GD-FFAYT  101 (442)
Q Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~-------~~~~~~-~~-~~~~~  101 (442)
                      +..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++..++++.+       +..+.. .+ ...+.
T Consensus        68 R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~ea~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  146 (534)
T 2y53_A           68 RAARLADIVKLLQAKRGDYYAIATANSGTTRNDSAV-DIDGGIFTLSYYAKLGASLGEVHALRDGSAESLSKDRSFSAQH  146 (534)
T ss_dssp             HHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHTTCSCSEEEEEEEEECSTTSSEEEEE
T ss_pred             HHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhccccccccCCccccCCCCCcccceE
Confidence            344444444444455666799999999999999997 999999999999988766533       111221 12 24578


Q ss_pred             Eeecc-ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhC-CCCCcEEeecCCc-cchhhh
Q psy5844         102 RHEPV-GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG-IPEGVVNIVPGYG-DAGAAL  178 (442)
Q Consensus       102 ~~~P~-Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~ag-lp~~~~~~v~~~~-~~~~~l  178 (442)
                      .++|+ |||++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++| +|+|++|+|+|++ +++..|
T Consensus       147 ~~~P~~GVv~~I~PwN~P~~~~~~~~a~ALaaGN~VVlKPs~~tp~~~~~l~~l~~~aG~lP~gvv~vv~g~~~~l~~~l  226 (534)
T 2y53_A          147 VLSPTRGVALFINAFNFPSWGLWEKAAPALLSGVPVIVKPATATAWLTQRMVADVVDAGILPPGALSIICGSSAGLLDQI  226 (534)
T ss_dssp             EEEECSSCEEEECCTTCTTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHTCSCTTSEEECCSCCTTSGGGC
T ss_pred             EEecCCCEEEEECCCchHHHHHHHHHHHHHHcCCEEEEECCCcchHHHHHHHHHHHHhCCCCCCeEEEEeCChHHHHhcc
Confidence            89997 99999999999999999999999999999999999999999999999999999 7999999999865 433333


Q ss_pred             hcCCCccEEeecCCHHHHHHHHhhcc-CCCCceeeeecCCCCceEEeCCC-----CHHHHHHHHHHHhhccCCCcccCCC
Q psy5844         179 VQHPGVDKVAFTGSTEVGKLVQQGSG-ASNLKRTTLELGGKSPNIIFADA-----DLDAAVEGAHFGLFFNMGQCCCAGS  252 (442)
Q Consensus       179 ~~~~~v~~v~ftGs~~~~~~i~~~~~-~~~~~~~~~e~gG~~~~iV~~da-----d~~~a~~~i~~~~~~~~Gq~C~s~~  252 (442)
                         +.++.|.||||+.+|+.|++.++ ..++||+++|+|||||+||++||     |++.|++.+++++|.|+||.|++++
T Consensus       227 ---~~vd~V~FTGS~~~G~~i~~~aa~a~~~k~v~lELGGk~p~iV~~dA~~~~~Dl~~Aa~~i~~~~~~n~GQ~C~a~~  303 (534)
T 2y53_A          227 ---RSFDVVSFTGSADTAATLRAHPAFVQRGARLNVQADSLNSAILCADATPDTPAFDLFIKEVVREMTVKSGQKCTAIR  303 (534)
T ss_dssp             ---CTTCEEEEESCHHHHHHHHTSHHHHTTCCEEEEECCCCEEEEECTTCCTTSHHHHHHHHHHHHHHHGGGGCCTTSEE
T ss_pred             ---cccCEEEEECCHHHHHHHHHhhhhhcCCCcEEEEcCCCCeEEECCCccccccCHHHHHHHHHHHHHhCCCCcccCCC
Confidence               56999999999999999998763 24899999999999999999999     9999999999999999999999999


Q ss_pred             EEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC------CCCcc
Q psy5844         253 RTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG------DKGFY  326 (442)
Q Consensus       253 ~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~------~~g~~  326 (442)
                      |||||++++|+|+++|+++++++++|||.|+++++||++++.+++++.++|+++ .+|+++++||....      ..|+|
T Consensus       304 rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a-~~ga~~~~GG~~~~~~~~~~~~g~~  382 (534)
T 2y53_A          304 RAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAAL-REEAVLAYDSSAVPLIDADANIAAC  382 (534)
T ss_dssp             EEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHH-HTSSEEEEECTTSCCBSCCTTTSCC
T ss_pred             EEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHH-HcCCEEEECCcccccccccCCCCce
Confidence            999999999999999999999999999999999999999999999999999999 68999999986421      35899


Q ss_pred             cccceeccCcch--hHHHHHhhcCCcccccccC---CH-----HHHHHHHhcCCCCceEEEecCCCChhhhhcccc--Ee
Q psy5844         327 VQPTVFANVRDD--MKIAREEIFGPVQQLIRFS---SI-----EEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL--RA  394 (442)
Q Consensus       327 v~pti~~~~~~~--~~~~~~e~fgPvl~v~~~~---~~-----~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~--~~  394 (442)
                      ++|||+.++.++  +.++++|+||||++++.|+   ++     +|+|+++|+.++||+++|||+|.+.+.++++++  ++
T Consensus       383 ~~PTvl~~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~a  462 (534)
T 2y53_A          383 VAPHLFVVNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADSH  462 (534)
T ss_dssp             CCCEEEECSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTTE
T ss_pred             ecCEEEEecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhhC
Confidence            999999998877  5789999999999999999   99     999999999999999999999999999999999  89


Q ss_pred             eeEEeeCCH
Q psy5844         395 GTLIRFSSI  403 (442)
Q Consensus       395 G~V~vN~~~  403 (442)
                      |+|+||+..
T Consensus       463 G~V~vN~~~  471 (534)
T 2y53_A          463 GRVHAISPS  471 (534)
T ss_dssp             EEEEEECGG
T ss_pred             CEEEEcCCc
Confidence            999999864

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=100.00  E-value=5.9e-69  Score=585.74  Aligned_cols=369  Identities=29%  Similarity=0.434  Sum_probs=337.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc--ccCCCcceEEEeeccc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI--PINGDFFAYTRHEPVG  107 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~P~G  107 (442)
                      .+..+++.......+.++.+++++++|+|||+.++.. |+..+++.++|++..+++..+...  +.+.+...++.++|+|
T Consensus       573 eR~~iL~~~ad~l~~~~~eLa~~~~~E~GK~~~ea~~-Ev~~ai~~lr~~a~~a~~~~g~~~~~~~~~g~~~~~~~~P~G  651 (1001)
T 3haz_A          573 IRAAALEQAAHLLESRSAHFIALLQREGGKTLDDALS-ELREAADFCRYYAAQGRKLFGSETAMPGPTGESNALTMRGRG  651 (1001)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHTTCCCHHHHHH-HHHHHHHHHHHHHHHHHHHHSSCEECCCCTTEEEEEEEEECS
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCChhHHHH-HHHHHHHHHHHHHHHHHhhcCccccccCCCCCceEEEEeCCc
Confidence            3444444444444455677799999999999999998 999999999999999887766543  2235677899999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEE
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKV  187 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v  187 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.++|+|+|++|+++|+++.+..|+.||+++.|
T Consensus       652 VV~~I~PwNfPl~i~~~~va~ALAAGNtVVlKPse~tp~ta~~l~ell~eAGlP~gvv~vV~G~g~~g~~L~~~p~Vd~V  731 (1001)
T 3haz_A          652 VFVAISPWNFPLAIFLGQVTAALMAGNSVVAKPAEQTPRIAREAVALLHEAGIPKSALYLVTGDGRIGAALTAHPDIAGV  731 (1001)
T ss_dssp             EEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCTTCHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHCTTCCEE
T ss_pred             EEEEEcCCCChHHHHHHHHHHHHHcCCEEEEecchhhHHHHHHHHHHHHHhCcCcCcEEEEecCchHHHHHHhCCCcCEE
Confidence            99999999999999999999999999999999999999999999999999999999999999988339999999999999


Q ss_pred             eecCCHHHHHHHHhhccCC--CCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGAS--NLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~--~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      +||||+.+|+.|++.++++  +++|+++|+|||||+||++|||++.|++.+++|+|.|+||.|++++|||||++++|+|+
T Consensus       732 ~FTGSt~vGr~I~~~aA~~~~~l~pv~lElGGknp~IV~~dADld~Aa~~iv~s~f~naGQ~C~A~~rllV~e~i~d~f~  811 (1001)
T 3haz_A          732 VFTGSTEVARSINRALAAKDGPIVPLIAETGGINAMIADATALPEQVADDVVTSAFRSAGQRCSALRLLFVQEDVADRMI  811 (1001)
T ss_dssp             EEESCHHHHHHHHHHHHHSSSCCCCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHHHHHH
T ss_pred             EecCCHHHHHHHHHHHhcccCCCceEEeecCCcceEEEcCCCCHHHHHHHHHHHHHhCCCCCCCCCceeeccHHHHHHHH
Confidence            9999999999999887742  58999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++|++.++++++|+|.++++++||+++..+.+++.++|++++..| ++ +||... +.|+|+.|||+..  .++.++++|
T Consensus       812 ~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g-~v-~gg~~~-~~G~fv~PTvl~~--~~~~~~~eE  886 (1001)
T 3haz_A          812 EMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEA-RL-HFAGPA-PEGCFVAPHIFEL--TEAGQLTEE  886 (1001)
T ss_dssp             HHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHS-EE-EEECCC-CSSSCCCCEEEEC--SSGGGCCSC
T ss_pred             HHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcC-eE-eccccC-CCCcEEeeEEecC--CCHHHHhcc
Confidence            999999999999999999999999999999999999999999888 88 887653 4599999999974  567778999


Q ss_pred             hcCCcccccccCC--HHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         346 IFGPVQQLIRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       346 ~fgPvl~v~~~~~--~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +||||++++.|++  ++|+|+++|+++|||+++|||+|.+.+.++++++++|+|+||+...
T Consensus       887 iFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~VN~~~~  947 (1001)
T 3haz_A          887 VFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIYVNRNMI  947 (1001)
T ss_dssp             CCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEEESSCSC
T ss_pred             ccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEEEeCCCc
Confidence            9999999999996  8999999999999999999999999999999999999999999764

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=100.00  E-value=2.2e-66  Score=536.24  Aligned_cols=358  Identities=19%  Similarity=0.234  Sum_probs=319.9

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhh--hcCcccc----c--CCC-cceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADK--IHGKTIP----I--NGD-FFAY  100 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~--~~~~~~~----~--~~~-~~~~  100 (442)
                      .+..+++.......+.++.+++++++|+|||+.++.. |+..+++.+++++..+++  ..+..+.    .  +.+ ...+
T Consensus        53 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  131 (510)
T 1ez0_A           53 KRASLLRTIASELEARSDDIIARAHLETALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIR  131 (510)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHHhCccccccccccccccCCCCCCCce
Confidence            4555555555555666788899999999999999988 999999999999988865  3333221    1  112 2358


Q ss_pred             EEeeccceEEEecccccchHHH--HhhhhhhhccCCeEEecCCCCChHHHHHHHHHH----HHhCCCCCcEEeecCCc-c
Q psy5844         101 TRHEPVGVCGQIIPWNFPLLML--AWKIAPALATGNTIVLKPAEQTPLTALAVGALI----AEAGIPEGVVNIVPGYG-D  173 (442)
Q Consensus       101 ~~~~P~Gvv~~i~p~n~P~~~~--~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l----~~aglp~~~~~~v~~~~-~  173 (442)
                      ++++|+|||++|+|||||+...  .+++++||++||+||+|||+.+|+++..+++++    .++|+|+|++|+++|.+ +
T Consensus       132 ~~~~P~GVv~~I~PwN~P~~~~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~aGlP~gvv~vv~g~~~~  211 (510)
T 1ez0_A          132 RQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRA  211 (510)
T ss_dssp             EEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTH
T ss_pred             EEEecCcEEEEECCccchhhhhhhHHHHHHHHHcCCEEEEECCCCchHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCcHH
Confidence            8999999999999999999984  499999999999999999999999999999998    56799999999999966 8


Q ss_pred             chhhhhcCCCccEEeecCCHHHHHHHHhhccCCCC--ceeeeecCCCCceEEeCCCCHH--HHHHHHHHHhhccCCCccc
Q psy5844         174 AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNL--KRTTLELGGKSPNIIFADADLD--AAVEGAHFGLFFNMGQCCC  249 (442)
Q Consensus       174 ~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~--~~~~~e~gG~~~~iV~~dad~~--~a~~~i~~~~~~~~Gq~C~  249 (442)
                      .++.|+.||.++.|+||||+.+|+.|++.++ .++  ||+++|+|||||+||++|||++  .|++.+++++|.|+||.|+
T Consensus       212 ~g~~L~~~p~v~~I~FTGS~~~G~~i~~~aa-~~l~~~pv~lELGGk~p~iV~~dADl~~~~aa~~i~~~~~~n~GQ~C~  290 (510)
T 1ez0_A          212 LGQALVSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCT  290 (510)
T ss_dssp             HHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTT
T ss_pred             HHHHHHcCCCCCEEEEeCcHHHHHHHHHHhh-ccCCCccEEEECCCCCeEEEeCCCCccHHHHHHHHHHHHHcCCCCCcC
Confidence            8999999999999999999999999999888 464  9999999999999999999999  9999999999999999999


Q ss_pred             CCCEEEEcCc-cHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHh-cCCEEEeCCcccCCCCccc
Q psy5844         250 AGSRTFVQDT-IYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKS-QGAQLVAGGGRAGDKGFYV  327 (442)
Q Consensus       250 s~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~-~Ga~~~~gg~~~~~~g~~v  327 (442)
                      +++|||||++ ++|+|+++|.++++++++          ||++++.+.+++.+++++++. +|+++++||.    .|+|+
T Consensus       291 a~~rvlV~~~~i~d~f~~~l~~~~~~~~~----------gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~----~g~~~  356 (510)
T 1ez0_A          291 KPGVVFALNTPETQAFIETAQSLIRQQSP----------STLLTPGIRDSYQSQVVSRGSDDGIDVTFSQA----ESPCV  356 (510)
T ss_dssp             CCCEEEEESSHHHHHHHHHHHHHHHHCCC----------BCCSSHHHHHHHHHHHHHHHTSTTEEEEECCC----CTTSB
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHHhcCC----------CCCCCHHHHHHHHHHHHHHHhcCCCEEEecCC----CCCEe
Confidence            9999999999 999999999999999863          688999999999999999984 7999999986    28999


Q ss_pred             ccceeccCcch---hHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCC--Chhhhhcccc--EeeeEEee
Q psy5844         328 QPTVFANVRDD---MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDL--DKTNYVTQGL--RAGTLIRF  400 (442)
Q Consensus       328 ~pti~~~~~~~---~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~--~~~~~~~~~~--~~G~V~vN  400 (442)
                      +|||+....++   +.++++|+||||++++.|++++|+|+++|+.++||+++|||+|.  +.+.++++++  ++|.|+||
T Consensus       357 ~Ptvl~~~~~~~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~iN  436 (510)
T 1ez0_A          357 ASALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFN  436 (510)
T ss_dssp             CCEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEES
T ss_pred             cCEEEEecCCccccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEEEC
Confidence            99999877666   88999999999999999999999999999999999999999987  6899999998  79999999


Q ss_pred             CCH
Q psy5844         401 SSI  403 (442)
Q Consensus       401 ~~~  403 (442)
                      +..
T Consensus       437 ~~~  439 (510)
T 1ez0_A          437 GWP  439 (510)
T ss_dssp             SCS
T ss_pred             CCC
Confidence            864

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=100.00  E-value=2.9e-66  Score=537.51  Aligned_cols=361  Identities=22%  Similarity=0.255  Sum_probs=319.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhh--cCcccc----c--C-CCcceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKI--HGKTIP----I--N-GDFFAY  100 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~--~~~~~~----~--~-~~~~~~  100 (442)
                      .+..+++.......+.++.+++++++|+|||+.+++. |+..+++.+++++..+++.  .+....    .  + .+...+
T Consensus        86 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  164 (528)
T 3v4c_A           86 ERAAFLRAIADEIEARAEAITEIGSQETGLPEARLNG-ERGRTTGQLRLFADHIEKGDYLDRRVDAAMPERQPAPRQEIR  164 (528)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHCGGGCCEEECCBTTCSSSCBCCEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhccccccccccccccccCCCCCcce
Confidence            4445555555555566778899999999999999998 9999999999999888662  232221    0  1 234578


Q ss_pred             EEeeccceEEEecccccchHHHH--hhhhhhhccCCeEEecCCCCChHHHHHHHHHH----HHhCCCCCcEEeecCCc-c
Q psy5844         101 TRHEPVGVCGQIIPWNFPLLMLA--WKIAPALATGNTIVLKPAEQTPLTALAVGALI----AEAGIPEGVVNIVPGYG-D  173 (442)
Q Consensus       101 ~~~~P~Gvv~~i~p~n~P~~~~~--~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l----~~aglp~~~~~~v~~~~-~  173 (442)
                      +.++|+|||++|+|||||+...+  +++++||++||+||+|||+.+|.++..+++++    .++|+|+|++|+++|++ +
T Consensus       165 ~~~~P~GVv~~I~PwN~P~~~~~~~~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~~~~  244 (528)
T 3v4c_A          165 LVQRPVGPVAVFGASNFPLAFSTAGGDTAAALAAGCPVVVKGHSAHPGTGEIVAEAVDAAIRKTGVHPGVFSLIQGGSRD  244 (528)
T ss_dssp             EEEEECSCEEEECCSSSTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCCCHH
T ss_pred             eEeeCCcEEEEECCCcchHHHhhhhhhhHHHHhcCCEEEEECCCCCcHHHHHHHHHHHHHHHhcCCCcCeEEEEeCCCHH
Confidence            99999999999999999999855  89999999999999999999999999998875    46899999999999977 8


Q ss_pred             chhhhhcCCCccEEeecCCHHHHHHHHhhccCCCC--ceeeeecCCCCceEEeCCC---CHHHHHHHHHHHhhccCCCcc
Q psy5844         174 AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNL--KRTTLELGGKSPNIIFADA---DLDAAVEGAHFGLFFNMGQCC  248 (442)
Q Consensus       174 ~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~--~~~~~e~gG~~~~iV~~da---d~~~a~~~i~~~~~~~~Gq~C  248 (442)
                      .++.|+.||+++.|.||||+.+|+.|++.++ .++  +|+++|+|||||+||++||   |++.|++.+++++|.|+||.|
T Consensus       245 ~g~~L~~~p~v~~V~fTGS~~~G~~i~~~aa-~~~~~~pv~lElGGk~p~iV~~dAd~~dl~~Aa~~i~~~~~~n~GQ~C  323 (528)
T 3v4c_A          245 VGHALVQHPHIKAVGFTGSLAGGRALFDLCA-ARPEPIPFFGELGSVNPMFLLPEALKARAETLGQGWAGSLTMGAGQFC  323 (528)
T ss_dssp             HHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCCEEECHHHHHHHHHHHHHHHHHHHHGGGGCCT
T ss_pred             HHHHHHhCCCCCEEEEECChHHHHHHHHHHh-hccCCCceEEecCCCCeEEECCCCChhhHHHHHHHHHHHHHhcCCCcc
Confidence            9999999999999999999999999999888 577  9999999999999999999   889999999999999999999


Q ss_pred             cCCCEEEEcCc-cHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCccc
Q psy5844         249 CAGSRTFVQDT-IYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYV  327 (442)
Q Consensus       249 ~s~~~v~V~~~-~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v  327 (442)
                      ++++|||||++ ++|+|+++|+++++++++      ++.+||+++..+.+++.++++   .+|+++++||..   .|+|+
T Consensus       324 ~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~------~~~~gp~~~~~~~~~v~~~~~---~~Ga~v~~gG~~---~g~~~  391 (528)
T 3v4c_A          324 TNPGIAVVIEGADADRFTTAAVEALAKVAP------QTMLTDGIAKAYRDGQARFAT---RNAVKPLLATES---SGRDA  391 (528)
T ss_dssp             TCCCEEEEESSHHHHHHHHHHHHHHHTCCC------EECSCHHHHHHHHHHHHHHHT---CTTCEEEECCCC---CTTEE
T ss_pred             ccCcEEEEecccHHHHHHHHHHHHHHhccc------CCCCCHHHHHHHHHHHHHHHH---hCCCEEEeCCCc---CCcee
Confidence            99999999997 999999999999998864      367899998888887777763   479999999975   68999


Q ss_pred             ccceeccCcch---hHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecC--CCChhhhhccccE--eeeEEee
Q psy5844         328 QPTVFANVRDD---MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTK--DLDKTNYVTQGLR--AGTLIRF  400 (442)
Q Consensus       328 ~pti~~~~~~~---~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~--d~~~~~~~~~~~~--~G~V~vN  400 (442)
                      .|||+.+..++   +.++++|+||||++++.|++++|+|+++|+.++||+++|||+  |.+++.+++++++  +|+|+||
T Consensus       392 ~PTvl~~~~~~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~vN  471 (528)
T 3v4c_A          392 SPNLFETTGAQFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVLVN  471 (528)
T ss_dssp             CCEEEEEEHHHHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEEES
T ss_pred             ccEEEEecCcccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEEEc
Confidence            99999877776   788999999999999999999999999999999999999999  7789999999997  9999999


Q ss_pred             CCHH
Q psy5844         401 SSIE  404 (442)
Q Consensus       401 ~~~~  404 (442)
                      +...
T Consensus       472 ~~~~  475 (528)
T 3v4c_A          472 GFPT  475 (528)
T ss_dssp             SCTT
T ss_pred             CCCC
Confidence            9653

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=100.00  E-value=3.9e-62  Score=499.30  Aligned_cols=354  Identities=15%  Similarity=0.175  Sum_probs=301.3

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccce
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGV  108 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gv  108 (442)
                      ..+.++++.......+.++.+++++++|+|||..+++..+...+++.+.++.... +..+. +..+.+...+..++|+||
T Consensus        34 ~~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~e~~~~~~~~~~~~~~~~~~~~-~~~g~-~~~~~~~~~~~~~~P~GV  111 (464)
T 3k9d_A           34 QQIDTIVKAIADAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDM-KTIGM-LKEDNEKKVMEVAVPLGV  111 (464)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTTC-CCSEE-EEEETTTTEEEEEEECCE
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHhCcCHHHHHHHHHHHHHHHHHHhhhcc-cccce-eccCCCceeEEEEecceE
Confidence            3455666666555556678889999999999999886545444444443333211 11121 122245678899999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHH----HHHHHhCCCCCcEEeecCCc-cchhhhhcCCC
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVG----ALIAEAGIPEGVVNIVPGYG-DAGAALVQHPG  183 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~----~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~  183 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|.++..++    +++.++|+|+|+++++++++ +.++.|+.||+
T Consensus       112 v~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~ap~t~~~l~~ll~~~~~~aG~P~gvv~vv~g~~~~~~~~L~~~~~  191 (464)
T 3k9d_A          112 VAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISEAAEKAGCPKGAISCMTVPTIQGTDQLMKHKD  191 (464)
T ss_dssp             EEEEECSSSHHHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHCTT
T ss_pred             EEEECCCcChHHHHHHHHHHHHHhCCeEEEECCcchHHHHHHHHHHHHHHHHHhCCCCCeEEEEeCCCHHHHHHHHhCCC
Confidence            99999999999999999999999999999999999999998865    45688899999999999976 89999999999


Q ss_pred             ccEEeecCCHHHHHHHHhhccCCCCceeeeecC-CCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         184 VDKVAFTGSTEVGKLVQQGSGASNLKRTTLELG-GKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       184 v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~g-G~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      +|.|+||||+.+.    +.++ .++||+ +|+| ||+|+||++|||++.|++.+++++|+|+||.|++++|||||+++||
T Consensus       192 vd~I~fTGs~~v~----~~a~-~~~kpv-lelG~G~~p~iV~~dADl~~Aa~~i~~~~~~n~Gq~C~a~~rvlV~~~i~d  265 (464)
T 3k9d_A          192 TAVILATGGSAMV----KAAY-SSGTPA-IGVGPGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKE  265 (464)
T ss_dssp             EEEEEECSCHHHH----HHHT-TSSSCE-EEBCCCCCEEEECTTSCHHHHHHHHHHHHTGGGGCSTTSCCEEEEEHHHHH
T ss_pred             CCEEEEeCChHHH----HHHH-hcCCcE-EeeCCCCCeEEECCCCCHHHHHHHHHHHHhcCCCCCCCCCcEEEEeHHHHH
Confidence            9999999999854    3444 578999 7888 9999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHH-------hhcccCCCC-CCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceecc
Q psy5844         263 EFVARSGERA-------KRRTVGDPF-DLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFAN  334 (442)
Q Consensus       263 ~f~~~l~~~~-------~~~~~g~p~-~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~  334 (442)
                      +|+++|+++.       +.+++|+|. ++++++||+++..+++++.++++.++.+|+++++||..              +
T Consensus       266 ~f~~~l~~~~~~~~~~~~~~~~g~~~~~~~~~~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg~~--------------~  331 (464)
T 3k9d_A          266 AVIAEFRKQGAHFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEET--------------K  331 (464)
T ss_dssp             HHHHHHHHTTEEECCHHHHHHHHHHHBCTTSCBCGGGTTCCHHHHHHHTTCCCCTTCCEEEEECC--------------C
T ss_pred             HHHHHHHHhhhhhcChhhhhhhcccccCCCCccCcccCHHHHHHHHHHhhhhhcCCCEEEEcCCC--------------C
Confidence            9999999985       567889998 77899999999999999999999888889999998853              2


Q ss_pred             CcchhHHHHHhhcCCcccccccCCHHHHH----HHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         335 VRDDMKIAREEIFGPVQQLIRFSSIEEVI----ERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       335 ~~~~~~~~~~e~fgPvl~v~~~~~~~eai----~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      +.+++.. .+|+||||++++.|++++|+|    +++|+.++||+++|||+|.+.+.++++++++|.|++|++...
T Consensus       332 v~~~~~~-~~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a~i~t~d~~~a~~~~~~l~~G~v~vN~~~~~  405 (464)
T 3k9d_A          332 VGAKIPY-SREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKKPVSRLLVNTPGAL  405 (464)
T ss_dssp             CSTTCGG-GSCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEEEEECSCHHHHHHHHHHSSEEEEEESSCHHH
T ss_pred             CCCCCcc-cccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEECCccc
Confidence            2333443 379999999999999999997    789999999999999999999999999999999999999864

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=100.00  E-value=8e-62  Score=495.99  Aligned_cols=336  Identities=15%  Similarity=0.095  Sum_probs=280.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCCh----hhhchhHHHH-HHHHHHHHHHhHhhhc------Cccccc---CC
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPY----NMSYSVDVEY-SLRTLRYYAGFADKIH------GKTIPI---NG   95 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~----~~a~~~ev~~-~~~~~~~~~~~~~~~~------~~~~~~---~~   95 (442)
                      .+.++++.......+.++.+++++++|+|||.    .++...|+.. ++..+++++..+++..      ++..+.   +.
T Consensus        37 ~R~~~L~~~a~~l~~~~~ela~~~~~e~Gk~~~~g~~ea~~~ev~~~~~~~~~~~a~~~~~~~~~~~~~g~~~~~~~~~~  116 (468)
T 1vlu_A           37 GRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPVGKVKMARELDD  116 (468)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSSSCEEEEEEEET
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccchHHHHHHhhhhHHHHHHHHHHHHHHhhcCCCCCeecccccCCC
Confidence            45556666655556678889999999999999    8886349999 9999999988776654      443221   12


Q ss_pred             CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----H----hCCCCCcEEe
Q psy5844          96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----E----AGIPEGVVNI  167 (442)
Q Consensus        96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~----aglp~~~~~~  167 (442)
                      +...++.++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++.    +    +|+|+|++|+
T Consensus       117 ~~~~~~~~~P~GVV~~I~pwN-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~aL~e~~~~aGlP~gvv~v  194 (468)
T 1vlu_A          117 GLTLYQVTAPVGVLLVIFESR-P-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVGSVQL  194 (468)
T ss_dssp             TEEEEEEEEECCEEEEEESSC-T-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTTSEEE
T ss_pred             CceeEEEecCcceEEEEeccC-h-HHHHHHHHHHHHcCCEEEEEcCCccHHHHHHHHHHHHHHHHhhchhcCCCCCcEEE
Confidence            455789999999999999999 9 9999999999999999999999999999999999995    8    9999999999


Q ss_pred             ecCCc-cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCC
Q psy5844         168 VPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQ  246 (442)
Q Consensus       168 v~~~~-~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq  246 (442)
                      ++ ++ ++++.|+.||++|.|.||||+.+|+.|++.+    +||+++|+|||||+||++|||++.|++.+++++|.|+| 
T Consensus       195 v~-~~~~~g~~L~~~p~vd~I~fTGS~~~g~~i~~~a----~kpv~lElGGk~p~iV~~dADl~~Aa~~i~~~~~~n~G-  268 (468)
T 1vlu_A          195 IE-TRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNYPA-  268 (468)
T ss_dssp             CC-CC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC----
T ss_pred             EC-CHHHHHHHHhhCCCcCEEEEECCHHHHHHHHHhc----CCCEEeecCCccceEECCCCCHHHHHHHHHHHhcCCCC-
Confidence            99 66 7899999999999999999999999999864    69999999999999999999999999999999999999 


Q ss_pred             cccCCCEEEEcCccHHHHHHHHHHHHhhccc---CCCCCCCCccCcCCCHHHHHHHHHH-HHHHHhcCCEEEeCCcccCC
Q psy5844         247 CCCAGSRTFVQDTIYDEFVARSGERAKRRTV---GDPFDLNVEQGPQIDKEQMDKILEF-IESGKSQGAQLVAGGGRAGD  322 (442)
Q Consensus       247 ~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~-i~~a~~~Ga~~~~gg~~~~~  322 (442)
                      .|++++|||||+++ |+|+++|.+.++++++   |+|.+                 .++ +++++    ++++||.    
T Consensus       269 ~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~-----------------~~~~i~~a~----~~~~gG~----  322 (468)
T 1vlu_A          269 GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL-----------------KTAYFDKLN----ELGKLTE----  322 (468)
T ss_dssp             -CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH-----------------HHHHHHHHH----HHTCCCH----
T ss_pred             cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH-----------------hcccccccc----eeeccCC----
Confidence            99999999999999 9999999999999987   87643                 334 55554    3555664    


Q ss_pred             CCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCC
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSS  402 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~  402 (442)
                       |  +.||++  +..++.++++|+||||+++..|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|+||+.
T Consensus       323 -g--~~Ptvl--v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~vN~~  397 (468)
T 1vlu_A          323 -A--IQCKTV--DADEEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAS  397 (468)
T ss_dssp             -H--HHTTBC---------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSC
T ss_pred             -C--CCCcee--eCCCchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEcCC
Confidence             4  689987  67889999999999999999999999999999999999999999999999999999999999999987


Q ss_pred             HH
Q psy5844         403 IE  404 (442)
Q Consensus       403 ~~  404 (442)
                      ..
T Consensus       398 ~~  399 (468)
T 1vlu_A          398 TR  399 (468)
T ss_dssp             GG
T ss_pred             CC
Confidence            63

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=100.00  E-value=1.4e-61  Score=493.60  Aligned_cols=351  Identities=19%  Similarity=0.254  Sum_probs=295.9

Q ss_pred             CCCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHH-HHHHHhHhhhcCcccccCCCcceEEEeecc
Q psy5844          28 PITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTL-RYYAGFADKIHGKTIPINGDFFAYTRHEPV  106 (442)
Q Consensus        28 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~  106 (442)
                      ..++..+++.......+.++.+++++++|+|||..++...|+..+++.+ +++..  .+..+ .++.+.+...+..++|+
T Consensus        28 ~~~R~~il~~~a~~l~~~~~~la~~~~~e~Gk~~~e~~~~~~~~a~~~~~~~~~~--~~~~g-~~~~~~~~~~~~~~~P~  104 (452)
T 3my7_A           28 QEQVDKIFRAASLAANQARIPLAQQAVEESGMGIVEDKVIKNHFASEFIYNKYKD--EQTCG-ILEEDDNLGTMTIAEPV  104 (452)
T ss_dssp             HHHHHHHHHHHHHHHHHTHHHHHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHTT--CCCSE-EC-------CEEEEEEC
T ss_pred             HHHHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHhhh--ccccc-cccCCCCCceEEEecCc
Confidence            3456667776666666778889999999999999999865777777666 33322  11112 12222345578999999


Q ss_pred             ceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCCc-cchhhhhcC
Q psy5844         107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGYG-DAGAALVQH  181 (442)
Q Consensus       107 Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~~-~~~~~l~~~  181 (442)
                      |||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.    ++|+|+|+++++++++ +.++.|+.|
T Consensus       105 GVv~~I~P~N~P~~~~~~k~~~ALaaGN~VVlKps~~tp~~~~~~~~~~~~a~~~aG~P~gvv~~v~g~~~~~~~~L~~~  184 (452)
T 3my7_A          105 GIICGIVPTTNPTSTAIFKSLISLKTRNGIIFSPHPRAKNSTNDAAKLVLDAAVAAGAPKDIIGWIDQPSVELSNALMKH  184 (452)
T ss_dssp             CEEEEEECTTSTTHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHHHHHHHTTCCTTSEEECSSCCHHHHHHHHHC
T ss_pred             eEEEEEcCCCChHHHHHHHHHHHHhcCCeEEEEcCCCchHHHHHHHHHHHHHHHHcCCCcCcEEEEcCCCHHHHHHHHhC
Confidence            99999999999999999999999999999999999999999998888875    7899999999999977 899999999


Q ss_pred             CCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH
Q psy5844         182 PGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY  261 (442)
Q Consensus       182 ~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~  261 (442)
                      |+++.|.||||+.+++.    ++ +++||+++|+|||+|+||++|||++.|++.+++++|+|+||.|++++|||||+++|
T Consensus       185 p~v~~V~fTGs~~~~~~----a~-~~~kp~~~e~gG~~p~iV~~dADl~~Aa~~iv~s~~~~~GQ~C~a~~rv~V~~~i~  259 (452)
T 3my7_A          185 DDIALILATGGPGMVKA----AY-SSGKPAIGVGAGNVPVVIDETADIKRAVASVLMSKTFDNGVVCASEQAVIVVDEVY  259 (452)
T ss_dssp             TTCCEEEECSCHHHHHH----HH-TSSSCEEECC--CEEEEECTTSCHHHHHHHHHHGGGGGGGCCTTCEEEEEEEGGGH
T ss_pred             CCccEEEEECcHHHHHH----HH-hcCCCEEecCCCCCeEEEeCCCCHHHHHHHHHHHHhCCCCCccCCCcEEEEcHHHH
Confidence            99999999999997653    33 47899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc---CCCCcccccce-------
Q psy5844         262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA---GDKGFYVQPTV-------  331 (442)
Q Consensus       262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~---~~~g~~v~pti-------  331 (442)
                      |+|+++|+++               .||++++.+.+++.++++.+...|+++ .||...   ...|+|++||+       
T Consensus       260 d~f~~~l~~~---------------~gpli~~~~~~~v~~~i~~~~~~~a~v-~G~~~~~~~~~~G~~v~pt~~vl~~~~  323 (452)
T 3my7_A          260 DEVKERFASH---------------KAHVLSKTDADKVRKVLLIDGALNAKI-VGQPATAIAEMAGVKVPADTKVLIGEG  323 (452)
T ss_dssp             HHHHHHHHTT---------------TEEECCHHHHHHHHHHHEETTEECGGG-TTCCHHHHHHHHTCCCCTTCCEEEEEC
T ss_pred             HHHHHHHHHh---------------CCCcCCHHHHHHHHHHHHhhcccCCeE-ecCccchhHHhCCceeCCCeeEEeecc
Confidence            9999999865               399999999999999998765567665 466432   13589999998       


Q ss_pred             eccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcC----CCCceEEEecCCCChhhh---hccccEeeeEEeeCCH
Q psy5844         332 FANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNS----DYGLAAAVFTKDLDKTNY---VTQGLRAGTLIRFSSI  403 (442)
Q Consensus       332 ~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~----~~gl~~~v~s~d~~~~~~---~~~~~~~G~V~vN~~~  403 (442)
                      +.++.+++.+.. |+||||+++++|++++|+++++|+.    ++||+++|||+|.+...+   +++++++|+|+||++.
T Consensus       324 ~~~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~VN~~~  401 (452)
T 3my7_A          324 LGKVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARILINIPT  401 (452)
T ss_dssp             SSSCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEEESCCC
T ss_pred             ccCCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEEECCCC
Confidence            677888888664 8999999999999999999999986    599999999999988888   9999999999999965

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=100.00  E-value=7.5e-59  Score=473.45  Aligned_cols=325  Identities=15%  Similarity=0.123  Sum_probs=270.1

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHc-------CCChh----hhchhHHHHHHHHHHHHHHhHhhhcCcccccC---C
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDN-------GKPYN----MSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN---G   95 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~-------Gk~~~----~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~---~   95 (442)
                      .+.++++.......+.++.+++++++|+       |||+.    ++.. |+..+++.+++++..+++..+...+..   .
T Consensus        52 ~R~~~L~~~a~~l~~~~~ela~~~~~e~g~~~~~~Gk~~~~rl~~a~~-ev~~~~~~~~~~a~~~~~~~g~~~~~~~~~~  130 (463)
T 2h5g_A           52 QRAEIIHHLADLLTDQRDEILLANKKDLEEAEGRLAAPLLKRLSLSTS-KLNSLAIGLRQIAASSQDSVGRVLRRTRIAK  130 (463)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTSCHHHHHTTCCCHH-HHHHHHHHHHHHHHHCTTSTTCEEEEEEEET
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhhcccccCCCchhhhhhhhHH-HHHHHHHHHHHHHHhhHhhcCcccccccCCC
Confidence            4455555555555556788899999999       79998    5666 999999999999988766666543321   3


Q ss_pred             CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHh----CCCCCcEEeecCC
Q psy5844          96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEA----GIPEGVVNIVPGY  171 (442)
Q Consensus        96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~a----glp~~~~~~v~~~  171 (442)
                      +...++.++|+|||++|+||| |.+.. +++++||++||+||+|||+.+|+++..+++++.++    | |+|++|+++|+
T Consensus       131 ~~~~~~~~~P~GVv~~I~p~n-P~n~p-~~~a~ALaaGN~VVlKps~~tp~t~~~l~~l~~~al~~~G-P~gvv~vv~g~  207 (463)
T 2h5g_A          131 NLELEQVTVPIGVLLVIFESR-PDCLP-QVAALAIASGNGLLLKGGKEAAHSNRILHLLTQEALSIHG-VKEAVQLVNTR  207 (463)
T ss_dssp             TEEEEEEEEECCEEEEEESSC-TTHHH-HHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHTTT-CGGGEEECCTT
T ss_pred             CceeEEEEEcCceEEEEecCC-cHHHH-HHHHHHHHcCCEEEEECCCCcHHHHHHHHHHHHHHHHhcC-CCCeEEEEcCC
Confidence            456789999999999999887 87776 89999999999999999999999999999999999    9 99999999994


Q ss_pred             ccchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCC
Q psy5844         172 GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAG  251 (442)
Q Consensus       172 ~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~  251 (442)
                      .++++.|+.||+++.|+||||+.+|+.|++.++   +||+++|+|||||+||++|||++.|++.+++++|.| ||.|+++
T Consensus       208 ~~~g~~L~~~p~vd~I~FTGS~~~G~~i~~~aa---l~pv~lElGGk~p~iV~~dADl~~Aa~~i~~~~f~n-GQ~C~a~  283 (463)
T 2h5g_A          208 EEVEDLCRLDKMIDLIIPRGSSQLVRDIQKAAK---GIPVMGHSEGICHMYVDSEASVDKVTRLVRDSKCEY-PAACNAL  283 (463)
T ss_dssp             CCC-------CCCSEEEEESCHHHHHHHHHHCS---SSCBCSCSCCCEEEEECTTCCTTTHHHHHHHHHHSC-TTSTTSE
T ss_pred             HHHHHHHHhCCCcCEEEEECCHHHHHHHHHhcC---CCCEEEecCCcceEEEcCCCCHHHHHHHHHHHhccC-CCccccC
Confidence            388999999999999999999999999999776   899999999999999999999999999999999999 9999999


Q ss_pred             CEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccce
Q psy5844         252 SRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTV  331 (442)
Q Consensus       252 ~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti  331 (442)
                      +|||||++++|                         ||+     +   .++++.++++|++++.|+.. ...++|+    
T Consensus       284 ~rvlV~~~i~d-------------------------~p~-----~---~~~i~~~~~~Ga~v~~G~~~-~~~g~~~----  325 (463)
T 2h5g_A          284 ETLLIHRDLLR-------------------------TPL-----F---DQIIDMLRVEQVKIHAGPKF-ASYLTFS----  325 (463)
T ss_dssp             EEEEEEGGGTT-------------------------SHH-----H---HHHHHHHHHTTCEEEECHHH-HC---------
T ss_pred             cEEEEeccccc-------------------------hHH-----H---HHHHHHHHhCCCEEEeCCcc-cccCccC----
Confidence            99999999998                         232     2   33577778899999855432 2234443    


Q ss_pred             eccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         332 FANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       332 ~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                          ++++.++++|+||||+++..|++++|+|+++|+.+++|+++|||+|.+.+.++++++++|.|+||+...
T Consensus       326 ----~~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~iN~~~~  394 (463)
T 2h5g_A          326 ----PSEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVFWNASTR  394 (463)
T ss_dssp             --------CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG
T ss_pred             ----CCCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEEEeCCcc
Confidence                456778889999999999999999999999999999999999999999999999999999999998763

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=100.00  E-value=2.7e-58  Score=468.05  Aligned_cols=327  Identities=19%  Similarity=0.195  Sum_probs=267.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCCh----hhhch-------hHHHHHHHHHHHHHHhHhhhcCccccc---CC
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPY----NMSYS-------VDVEYSLRTLRYYAGFADKIHGKTIPI---NG   95 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~----~~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~   95 (442)
                      .+..+++.......+.++.+++++++|+||+.    .+++.       .|+..+++.+++++.+++.. +...+.   +.
T Consensus        49 ~R~~~L~~~a~~l~~~~~ela~~~~~e~gk~~~~g~~ea~~~~~~~~~~~v~~~~~~l~~~a~~~~~~-g~~~~~~~~~~  127 (444)
T 4ghk_A           49 AKNAALEAVARAIERDAGALKAANARDVARAKDKGLDAAFVDRLTLSDKALKTMVEGLRQVATLPDPI-GEMSNLKYRPS  127 (444)
T ss_dssp             HHHHHHHHHHHHHHHSHHHHHHHHHHHHCC------CCSHHHHHCCCTTHHHHHHHHHHHHHHSCCCT-TCEEEEEECTT
T ss_pred             HHHHHHHHHHHHHHhhHHHHHHHHHHHHhhhhhccchHHHHHHhhccHHHHHHHHHHHHHHHhhcccc-CccCCcccCCC
Confidence            34445555545455667788999999999995    46653       27899999999999877543 443332   24


Q ss_pred             CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHH----HHhCCCCCcEEeecCC
Q psy5844          96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALI----AEAGIPEGVVNIVPGY  171 (442)
Q Consensus        96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l----~~aglp~~~~~~v~~~  171 (442)
                      +...+++++|+|||++|+||| | ...++++++||++||+||+|||+.+|.++..+++++    .++|+|+|++++++|+
T Consensus       128 ~~~~~~~~~P~GVV~~I~p~n-P-~~~~~~~~~ALaaGN~VVlKps~~tp~t~~~l~~l~~~~l~~aGlP~gvv~vv~g~  205 (444)
T 4ghk_A          128 GIQVGQMRVPLGVIGIIYESR-P-NVTIDAAALCLKSGNATILRGGSEALESNTALAKLIGEGLAEAGLPQDTVQVVETA  205 (444)
T ss_dssp             SCEEEEEEEECSEEEEECCSC-H-HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHHHHTTCCGGGEEECCCC
T ss_pred             CccceEEEeccEEEEEEeCCC-c-HHHHHHHHHHHHcCCEEEEECCccchHHHHHHHHHHHHHHHHcCCCcccEEEEeCC
Confidence            566889999999999999998 8 688999999999999999999999999999999997    7899999999999985


Q ss_pred             c--cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCccc
Q psy5844         172 G--DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCC  249 (442)
Q Consensus       172 ~--~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~  249 (442)
                      +  +.++.|..||+++.|+||||+.+|+.+++.+    +||+++|+|||||+||++|||++.|++.+++++|.|+| .|+
T Consensus       206 ~~~~~~~~L~~~p~vd~V~fTGs~~vg~~v~~~a----~~pv~lELGGk~p~IV~~dADl~~Aa~~i~~~~~~n~G-~C~  280 (444)
T 4ghk_A          206 DRAAVGRLITMTEYVDVIVPRGGKSLIERLINEA----RVPMIKHLDGICHVYVDDRASVTKALTVCDNAKTHRYG-TCN  280 (444)
T ss_dssp             CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----CSCBCCCCCCCCEEEECTTCCHHHHHHHCC----------CC
T ss_pred             CHHHHHHHHhcCCCccEEEEECcHHHHHHHHHhC----CCCEEEEcCCcCeEEECCCCCHHHHHHHHHHHhcCCCc-ccC
Confidence            4  4788888999999999999999999998864    58999999999999999999999999999999999999 999


Q ss_pred             CCCEEEEcCccHHHHHHHHHHHHhhccc---CCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcc
Q psy5844         250 AGSRTFVQDTIYDEFVARSGERAKRRTV---GDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFY  326 (442)
Q Consensus       250 s~~~v~V~~~~~~~f~~~l~~~~~~~~~---g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~  326 (442)
                      +++|||||++++|+|+++|+++++++++   |+|.+                 .++++++. .              |  
T Consensus       281 a~~rvlV~~~i~d~f~~~l~~~~~~~~~~~~g~p~~-----------------~~~i~~a~-~--------------G--  326 (444)
T 4ghk_A          281 TMETLLVARGIAPAVLSPLGRLYREKGVELRVDADA-----------------RAVLEAAG-V--------------G--  326 (444)
T ss_dssp             CCCEEEEEGGGHHHHHHHHHHHHHHTTCEEEECHHH-----------------HHHHHHTT-C--------------C--
T ss_pred             cCceEEEeHHHHHHHHHHHHHHHHHcCCeecCCHHH-----------------HHHHHhcc-c--------------C--
Confidence            9999999999999999999999999987   76531                 35555432 1              1  


Q ss_pred             cccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         327 VQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       327 v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                          ++  +..++.++++|+||||++++.|++++|+|+++|++++||+++|||+|.+++.++++++++|.|+||++..
T Consensus       327 ----~~--~~~~~~~~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~vN~~~~  398 (444)
T 4ghk_A          327 ----PL--VDATDEDWRTEYLAPVLAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVMVNASTR  398 (444)
T ss_dssp             ----CC--EECCSGGGTCC---CEEEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEEEEECGG
T ss_pred             ----cc--cCCCchhhhccccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEEEcCCCc
Confidence                11  2345667889999999999999999999999999999999999999999999999999999999999864

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=100.00  E-value=2.3e-58  Score=466.32  Aligned_cols=325  Identities=18%  Similarity=0.163  Sum_probs=279.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCCh----hhhch-------hHHHHHHHHHHHHHHhHhhhcCccccc---CC
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPY----NMSYS-------VDVEYSLRTLRYYAGFADKIHGKTIPI---NG   95 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~----~~a~~-------~ev~~~~~~~~~~~~~~~~~~~~~~~~---~~   95 (442)
                      .+.++++.......+.++.+++++++|+|||.    .++..       .|+..+++.+++++.++++ .+...+.   +.
T Consensus        37 ~R~~~L~~~a~~l~~~~~~la~~~~~e~gk~~~~g~~ea~~~~~~~~~~ev~~~~~~l~~~a~~~~~-~g~~~~~~~~~~  115 (427)
T 1o20_A           37 EKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDP-VGEVIDSWVRED  115 (427)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCCHHHHHHHCCCHHHHHHHHHHHHHHHHSCCC-TTCEEEEEECTT
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhhccccccccHHHHHHHhcCHHHHHHHHHHHHHHHhcccc-cCccccccccCC
Confidence            45555555555555667888999999999986    56641       3899999999999987765 3544332   23


Q ss_pred             CcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH----HhCCCCCcEEeecCC
Q psy5844          96 DFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA----EAGIPEGVVNIVPGY  171 (442)
Q Consensus        96 ~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~----~aglp~~~~~~v~~~  171 (442)
                      +...+++++|+|||++|+|||  +...++++++||++||+||+|||+.+|+++..+++++.    ++|+|+|++|+++|.
T Consensus       116 ~~~~~~~~~P~GVV~~I~p~p--~~~~~~~~~~ALaaGNtVVlKps~~tp~t~~~l~~l~~~al~eaGlP~gvv~vv~g~  193 (427)
T 1o20_A          116 GLRIARVRVPIGPIGIIYESR--PNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENT  193 (427)
T ss_dssp             SCEEEEEEEECCCEEEECCSC--THHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCC
T ss_pred             CceeEEEeecceeEEEEecCC--hHHHHHHHHHHHHcCCEEEEECCHhHHHHHHHHHHHHHHHHHHcCCCcccEEEecCC
Confidence            455788999999999999885  47899999999999999999999999999999999998    679999999999984


Q ss_pred             -c-cchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCccc
Q psy5844         172 -G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCC  249 (442)
Q Consensus       172 -~-~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~  249 (442)
                       . +.++.|..||+++.|+||||+.+|+.|++.+    .||+++|+|||||+||++|||++.|++.+++++|.|+| .|+
T Consensus       194 ~~~~~~~~L~~~~~v~~I~fTGS~~~G~~i~~~a----~~~v~lELGGk~p~iV~~dADl~~Aa~~i~~~~f~n~G-~C~  268 (427)
T 1o20_A          194 DRSLVLEMIRLREYLSLVIPRGGYGLISFVRDNA----TVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQRPG-TCN  268 (427)
T ss_dssp             CTHHHHHHTTCTTTCSEEEECSCHHHHHHHHHHC----SSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSCTT-STT
T ss_pred             ChHHHHHHHhCCCCccEEEeCCChHHHHHHHHhc----CCCEEEecCCCceEEEeCCCCHHHHHHHHHHHhccCCC-CCC
Confidence             4 5788899999999999999999999999875    48999999999999999999999999999999999999 999


Q ss_pred             CCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCccccc
Q psy5844         250 AGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQP  329 (442)
Q Consensus       250 s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~p  329 (442)
                      +++|||||++++|+|+++|.+.+++++++                                   +.||.+.  .+ |+ |
T Consensus       269 a~~rv~V~~~i~d~f~~~l~~~~~~~~~~-----------------------------------~~gg~~~--~~-~~-P  309 (427)
T 1o20_A          269 AAEKLLVHEKIAKEFLPVIVEELRKHGVE-----------------------------------VRGCEKT--RE-IV-P  309 (427)
T ss_dssp             SEEEEEEEHHHHHHHHHHHHHHHHHTTCE-----------------------------------EEECHHH--HH-HS-T
T ss_pred             CccEEEEehhhHHHHHHHHHHHHHHcCCe-----------------------------------eecChhh--hh-hC-C
Confidence            99999999999999999999999987642                                   1122211  12 33 8


Q ss_pred             ceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         330 TVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       330 ti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      |+.   ..++.++++|+||||+++.+|++++|+|+++|+.+|||+++|||+|.+.+.++++++++|.|+||+...
T Consensus       310 tl~---~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~iN~~~~  381 (427)
T 1o20_A          310 DVV---PATEDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTR  381 (427)
T ss_dssp             TSE---ECCGGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG
T ss_pred             ccc---CCCcchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEEECCCCc
Confidence            863   345678899999999999999999999999999999999999999999999999999999999998764

>2wme_A BADH, betaine aldehyde dehydrogenase; aldehyde oxidation, NAD, NADP complex, oxidoreductase; HET: NAP CSO; 2.10A {Pseudomonas aeruginosa} PDB: 2wox_A* 3zqa_A* 2xdr_A*

Probab=99.26  E-value=2.9e-12  Score=130.98  Aligned_cols=124  Identities=26%  Similarity=0.416  Sum_probs=104.3

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------------
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------------  368 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------------  368 (442)
                      .|...+..+|+..++++|...+....+++           +||+++-..++.+.+.|+.+..                  
T Consensus       285 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~l~vGdp~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~  364 (490)
T 2wme_A          285 VCTNGTRVFIHRSQQARFEAKVLERVQRIRLGDPQDENTNFGPLVSFPHMESVLGYIESGKAQKARLLCGGERVTDGAFG  364 (490)
T ss_dssp             CTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCTTTGG
T ss_pred             cCCCceeeccchhHHHHHHHHHHHHHHhCcCCCCccccCccCCcCCHHHHHHHHHHHHHHHhcCCEEEECCcccCccccc
Confidence            33344557999999988887776555543           7999999999998888887621                  


Q ss_pred             CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         369 SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       369 ~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++.+.++|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++++++++|++|+||
T Consensus       365 ~G~~~~Ptvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~yGL~a~v~t~d~~~a~~~~~~l~aG~v~  440 (490)
T 2wme_A          365 KGAYVAPTVFT-DCRDDMTIVREEIFGPVMSILVYDDEDEAIRRANDTEYGLAAGVVTQDLARAHRAIHRLEAGICW  440 (490)
T ss_dssp             GTTCBCCEEEE-SCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred             CCCccCCEEEE-cCCCCChhhhccccCCEEEEEEeCCHHHHHHHHhcCCCCCeEEEEcCCHHHHHHHHHHCCeeEEE
Confidence            24567889998 77888999999999975   778999999999999999999999999999999999999999986

>4h7n_A Aldehyde dehydrogenase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, ALDH_ddaldh, COG1012, glyco_hydro_97; 2.00A {Anabaena variabilis}

Probab=99.15  E-value=1.7e-11  Score=125.15  Aligned_cols=119  Identities=24%  Similarity=0.358  Sum_probs=98.3

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCCCceEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAAA  376 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~  376 (442)
                      +..+|+..+++++...+....+.           .+||++.-..++.+++.++.+..               .++.+.++
T Consensus       270 ~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~v~~Gg~~~~~~~g~~~~Pt  349 (474)
T 4h7n_A          270 ERIYVAESKFEEFYHQLIAKAHRLQLAYPLVEDGAIGPIIAEKQAGIINDHILDAVEKGAVIHCGGKVEELGGGWWCRPT  349 (474)
T ss_dssp             EEEEEEGGGHHHHHHHHHHHHHHCCBCCSSGGGCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCEEETTEEECCCE
T ss_pred             ccccchHHHHHHHHHHHHHHhhccccCCCcccccccCccccHHHHHHHHHHHHHHHhhCceeccCCcccccCCCcccCce
Confidence            44688888888877666544333           37899998888888888876632               13446778


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       350 v~~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~v~  417 (474)
T 4h7n_A          350 VMT-NVNHSMKVMTEETFGPIMPVMPFPDVEEAVYLANDTIYGLSAAVFAGSEDEALKVARQLNAGAIS  417 (474)
T ss_dssp             EEE-SCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSSHHHHHHHHTTSCCSEEE
T ss_pred             eEE-eeccccccccccccCcEEEEEEECCHHHHHHHHHcCCCCCeEEEEeCCHHHHHHHHHhCCeeEEE
Confidence            887 77888999999999965   778999999999999999999999999999999999999999985

>3rh9_A Succinate-semialdehyde dehydrogenase (NAD(P)(+)); structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.63A {Marinobacter aquaeolei}

Probab=99.14  E-value=2.8e-11  Score=124.22  Aligned_cols=120  Identities=25%  Similarity=0.401  Sum_probs=100.6

Q ss_pred             CCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc---------------CCCCceE
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN---------------SDYGLAA  375 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~  375 (442)
                      .+..+|+..++++|...+....+++           +||+++-..++.+.+.++.+..               .++.+.+
T Consensus       293 ~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~P  372 (506)
T 3rh9_A          293 ANRIFVHEKVADAFGQKLAERVNKMTVGDGMNDGIDIGPLINKQGFDKVKRHLQDALDKGASLVAGKQPAELGDGLFFPP  372 (506)
T ss_dssp             CCEEEEETTTHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEESCCGGGCCSSSCCCC
T ss_pred             CcEEEEcHHHHHHHHHHHHHHHHhccCCCCcccCCcccccCCHHHHHHHHHHHHHHHHCCCEEEecCCcCCCCCCcEECC
Confidence            3456888888888877766555543           6899999999998888887521               3455678


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       373 Tvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~  441 (506)
T 3rh9_A          373 TVVQ-GVDREMCCYQEETFGPLVPMALFRTEEEVIDAGNDTEFGLASYVFTADAERAQRVAAGLRFGHVG  441 (506)
T ss_dssp             EEEE-CCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred             eEEc-cCCCCChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCceEEEEcCCHHHHHHHHHhCCcceEE
Confidence            9998 67778899999999975   778999999999999999999999999999999999999999985

>3ifg_A Succinate-semialdehyde dehydrogenase (NADP+); niaid,.infectious disease, ssgcid, seattle structural genomi for infectious disease; 2.70A {Burkholderia pseudomallei} PDB: 3ifh_Q

Probab=99.14  E-value=2.4e-11  Score=124.24  Aligned_cols=123  Identities=25%  Similarity=0.393  Sum_probs=101.1

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCc
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGL  373 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl  373 (442)
                      |...+..+|+..++++|...+....+++           +||+++-..++.+.+.++.+..              .++.+
T Consensus       291 C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~g~~~  370 (484)
T 3ifg_A          291 CVCTNRFFVHERVYDAFADKLAAAVSKLKVGRGTESGATLGPLINEAAVKKVESHIADALAKGASLMTGGKRHALGHGFF  370 (484)
T ss_dssp             TTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCB
T ss_pred             ccCCCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCceE
Confidence            3333456888888888877665554443           6899998888888888876521              35567


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++|++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++++++++|++|+||
T Consensus       371 ~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~v~  441 (484)
T 3ifg_A          371 EPTVLT-GVKPDMDVAKEETFGPLAPLFRFASEEELVRLANDTEFGLAAYLYSRDIGRVWRVAEALEYGMVG  441 (484)
T ss_dssp             CCEEEE-EECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSEESEEEEECCBHHHHHHHHHHCCCSEEE
T ss_pred             cCEEEe-cCCCCChhhCCeeeCcEEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            889997 66777899999999975   678999999999999999999999999999999999999999985

>3ek1_A Aldehyde dehydrogenase; ssgcid, oxidoreductase, structural genomics; HET: MES; 2.10A {Brucella melitensis biovar ABORTUS2308}

Probab=99.13  E-value=1.8e-11  Score=125.62  Aligned_cols=119  Identities=25%  Similarity=0.408  Sum_probs=98.5

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhcC------------CCCceEEEec
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANNS------------DYGLAAAVFT  379 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~~------------~~gl~~~v~s  379 (442)
                      +..+|+..++++|...+....+++           +||+++-..++.+.+.++.+...            ++.+.++|++
T Consensus       315 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~g~~~~PTvl~  394 (504)
T 3ek1_A          315 NRIYVQRGVYDKFAEKLAAKVKELKVGNGTEPGVVIGPMIEEKAITKVKAHIEDAVSKGAKLITGGKELGGLFFEPGILT  394 (504)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEE
T ss_pred             CEEEEehhHHHHHHHHHHHHHhhcccCCCccccCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCeEEe
Confidence            345778888877776665544443           78999988899888888876422            3556788887


Q ss_pred             CCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         380 KDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       380 ~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                       |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       395 -~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~  459 (504)
T 3ek1_A          395 -GVTSDMLVAKEETFGPLAPLFAFDTEEEVIAQANDTIFGLAAYFYTENFSRAIRVSEALEYGMVG  459 (504)
T ss_dssp             -EECTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHSCCSEEE
T ss_pred             -cCCCcChhhcccccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEE
Confidence             67777899999999975   678999999999999999999999999999999999999999985

>3ros_A NAD-dependent aldehyde dehydrogenase; nysgrc, PSI-biology, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Lactobacillus acidophilus}

Probab=99.13  E-value=3.3e-11  Score=123.07  Aligned_cols=126  Identities=21%  Similarity=0.299  Sum_probs=103.6

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHh--------------cCC
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERAN--------------NSD  370 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an--------------~~~  370 (442)
                      |..|...+..+|+..++++|...+....+++           +||+++...++.+.+.++.+.              ..+
T Consensus       262 GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~g  341 (484)
T 3ros_A          262 GQVCTSSKRIIVEKSRYDEVLHELKNVFSNLKAGDPLEADTTLPPMNSEKAKEKLEAQVKEAIDAGAKVFYQYPEIDSKG  341 (484)
T ss_dssp             GCCTTSCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEEECCCCCCSS
T ss_pred             CCCccCCceEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCcCCCCC
Confidence            3344444557888888888877766555443           689999999999888888763              234


Q ss_pred             CCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+.++|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       342 ~~~~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~  415 (484)
T 3ros_A          342 AFFRPTILT-DIAKDNPVFDKEVFGPIAEVFVVEDDNAAIQLANDSSYGLGSSVIGSDIDRAKKVSAQIETGMTV  415 (484)
T ss_dssp             CCCCCEEEE-CCCTTSTTTTSCCCSSEEEEEEESSHHHHHHHHHSSSCCSCEEEECSCHHHHHHHHHHSCSSCCE
T ss_pred             ceeCCeEee-cCCCCCcccccccccceEEEEEcCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCccceEE
Confidence            567788988 77778899999999975   678999999999999999999999999999999999999999985

>3i44_A Aldehyde dehydrogenase; oxidoreductase, structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.00A {Bartonella henselae}

Probab=99.12  E-value=3.5e-11  Score=123.33  Aligned_cols=121  Identities=21%  Similarity=0.384  Sum_probs=100.8

Q ss_pred             CCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc-----------------CCCC
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN-----------------SDYG  372 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~-----------------~~~g  372 (442)
                      ..+..+|+..++++|...+....+++           +||+++-..++.+++.++.+..                 .++.
T Consensus       305 a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~  384 (497)
T 3i44_A          305 APTRMLVEQAIYDKAIKTAKDIAEKTQVGPGHQTGNHIGPVVSKEQYDKIQDLIQSGIDEGATLVTGGTGLPMGMERGYY  384 (497)
T ss_dssp             CCCEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSCSSCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSSCCTTCCSSCC
T ss_pred             cCCEEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCcCCCCcE
Confidence            33456888899888887766544432           6899999999998888886521                 2455


Q ss_pred             ceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         373 LAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       373 l~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.++|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       385 ~~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~  456 (497)
T 3i44_A          385 VRPTVFA-DVKPHMRIFREEIFGPVLSLLPFNTEDEAVTLANDTEYGLTNYIQSQDRSKCRRIAAQVRSGMVE  456 (497)
T ss_dssp             CCCEEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEE
T ss_pred             ECCEEEE-eCCCCCHHHcCcccCceEEEEecCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcCeEE
Confidence            7788998 77778899999999975   678999999999999999999999999999999999999999985

>3ed6_A Betaine aldehyde dehydrogenase; structural genomics, infecti deseases, NAD, oxidoreductase, PSI; 1.70A {Staphylococcus aureus} PDB: 3fg0_A*

Probab=99.12  E-value=2.6e-11  Score=124.86  Aligned_cols=121  Identities=29%  Similarity=0.404  Sum_probs=98.2

Q ss_pred             CCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHh------------------cCCC
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERAN------------------NSDY  371 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an------------------~~~~  371 (442)
                      ..+..+|+..++++|...+....++           .+||++.-..++.+++.++.+.                  ..++
T Consensus       315 a~~rvlV~~~i~d~f~~~l~~~~~~l~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~  394 (520)
T 3ed6_A          315 AGSRILVQNSIKDKFEQALIDRVKKIKLGNGFDADTEMGPVISTEHRNKIESYMDVAKAEGATIAVGGKRPDRDDLKDGL  394 (520)
T ss_dssp             CCCEEEEEHHHHHHHHHHHHHHHTTCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCCCGGGTTTT
T ss_pred             cCceEEEcHHHHHHHHHHHHHHHHhccCCCCccCCCcccccCCHHHHHHHHHHHHHHHhCCCEEEeCCCcCccccCCCCc
Confidence            3344677777777776665544333           2688888888888888887652                  1345


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       395 f~~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~  467 (520)
T 3ed6_A          395 FFEPTVIT-NCDTSMRIVQEEVFGPVVTVEGFETEQEAIQLANDSIYGLAGAVFSKDIGKAQRVANKLKLGTVW  467 (520)
T ss_dssp             CCCCEEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCCSEEE
T ss_pred             eECCeEEe-cCCCCCccccCceeCcEEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHHCCcceEE
Confidence            67889998 77778899999999975   678999999999999999999999999999999999999999985

>3jz4_A Succinate-semialdehyde dehydrogenase [NADP+]; tetramer, NADP binding, oxidoreductase; HET: NAP; 2.30A {Escherichia coli}

Probab=99.11  E-value=3.7e-11  Score=122.93  Aligned_cols=119  Identities=26%  Similarity=0.431  Sum_probs=98.0

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV  377 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v  377 (442)
                      +..+|+..++++|...+....+++           +||+++-..++.+.+.++.+..              .++.+.++|
T Consensus       292 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~Ptv  371 (481)
T 3jz4_A          292 NRLYVQDGVYDRFAEKLQQAMSKLHIGDGLDNGVTIGPLIDEKAVAKVEEHIADALEKGARVVCGGKAHERGGNFFQPTI  371 (481)
T ss_dssp             EEEEEEGGGHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCTTCTTCBCCEE
T ss_pred             cEEEEeHHHHHHHHHHHHHHHHhccCCCCccCcCccccccCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCceeccEE
Confidence            345778888877776665544443           6899988888888888876521              235678899


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       372 l~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  438 (481)
T 3jz4_A          372 LV-DVPANAKVSKEETFGPLAPLFRFKDEADVIAQANDTEFGLAAYFYARDLSRVFRVGEALEYGIVG  438 (481)
T ss_dssp             EE-SCCTTSGGGTSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECCBHHHHHHHHHHCCCSEEE
T ss_pred             Ee-cCCCCcccccccccCceEEEEEECCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeeEE
Confidence            98 67778899999999975   678999999999999999999999999999999999999999985

>3iwj_A Putative aminoaldehyde dehydrogenase; rossmann fold, dimer, betaine aldehyde dehydrogenase, NAD, oxidoreductase; HET: NAD; 2.15A {Pisum sativum} SCOP: c.82.1.0 PDB: 3iwk_A* 4a0m_A*

Probab=99.11  E-value=3.6e-11  Score=123.52  Aligned_cols=119  Identities=24%  Similarity=0.417  Sum_probs=99.4

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc----------------CCCCceE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN----------------SDYGLAA  375 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~----------------~~~gl~~  375 (442)
                      +..+|+..++++|...+....++           .+||+++-..++.+.+.++.+..                .++.+.+
T Consensus       298 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~g~~~~P  377 (503)
T 3iwj_A          298 SRLILHESIATEFLNRIVKWIKNIKISDPLEEGCRLGPVVSEGQYEKILKFVSNAKSEGATILTGGSRPEHLKKGFFIEP  377 (503)
T ss_dssp             EEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCCSSSCCCC
T ss_pred             CeeEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCcccCccCHHHHHHHHHHHHHHHHCCCEEEecCCCCccCCCCceeCC
Confidence            44688888888877766554444           27899998889988888876531                2455778


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..+++++++++++|+||
T Consensus       378 Tvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~  446 (503)
T 3iwj_A          378 TIIT-DVTTNMQIWREEVFGPVLCVKTFSTEEEAIDLANDTVYGLGAAVISNDLERCERVTKAFKAGIVW  446 (503)
T ss_dssp             EEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred             eeee-cCCCCchhhCceeeCceEEEEEeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHHhCCcceEE
Confidence            9998 77788999999999975   678999999999999999999999999999999999999999985

>3prl_A NADP-dependent glyceraldehyde-3-phosphate dehydro; structural genomics, protein structure initiative, dehydroge PSI-biology; 2.00A {Bacillus halodurans} PDB: 3rhh_A*

Probab=99.11  E-value=3.4e-11  Score=123.63  Aligned_cols=119  Identities=29%  Similarity=0.375  Sum_probs=98.8

Q ss_pred             CCcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHhc-----------CCCCceEEEecCC
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFTKD  381 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s~d  381 (442)
                      +..+|+..++++|...+....++          .+||++.-..++.+.+.++.+..           .++.+.++|++ |
T Consensus       297 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~g~~~~PTvl~-~  375 (505)
T 3prl_A          297 KRVFVQDSVADQLVANIKELVEQLTVGSPEDDADITPVIDEKSAAFIQGLIDDALENGATLLSGNKRQGNLLSPTLLD-D  375 (505)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHHHCCBSCTTTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEE-S
T ss_pred             ceEEEeHHHHHHHHHHHHHHHHhcccCCCCCcCcCCcccCHHHHHHHHHHHHHHHHCCCEEEecCCCCCceeCCeEee-c
Confidence            34577888887777666544444          36899999999998888887643           24556789998 7


Q ss_pred             CChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         382 LDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       382 ~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       376 v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~  439 (505)
T 3prl_A          376 VTPAMRVAWEEPFGPVLPIIRVKDANEAISLSNQSDYGLQASIFTKDTDRAINIGKHLEVGTVH  439 (505)
T ss_dssp             CCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECSCHHHHHHHHHTSCSSEEE
T ss_pred             CCCCChhhcCCccCcEEEEEEeCCHHHHHHHHhCCCCCeEEEEEcCCHHHHHHHHHHCCeeEEE
Confidence            7788899999999975   778999999999999999999999999999999999999999985

>3sza_A Aldehyde dehydrogenase, dimeric NADP-preferring; ALDH, rossmann fold, oxidoreductase; 1.48A {Homo sapiens} SCOP: c.82.1.1 PDB: 3szb_A* 1ad3_A*

Probab=99.10  E-value=3.7e-11  Score=122.38  Aligned_cols=123  Identities=20%  Similarity=0.273  Sum_probs=97.9

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhh----------cCCcccccccCCHHHHHHHH--------hcCCCCceEEEecC
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEI----------FGPVQQLIRFSSIEEVIERA--------NNSDYGLAAAVFTK  380 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~----------fgPvl~v~~~~~~~eai~~a--------n~~~~gl~~~v~s~  380 (442)
                      |...+..+|+..++++|...+....+++          +||+++-..++.+.+.++-+        ...++.+.++|++ 
T Consensus       260 C~a~~rvlV~~~i~d~f~~~l~~~~~~~~g~~~~~~~~~gpli~~~~~~rv~~~i~ga~v~~GG~~~~~g~~~~PTvl~-  338 (469)
T 3sza_A          260 CVAPDYILCDPSIQNQIVEKLKKSLKEFYGEDAKKSRDYGRIISARHFQRVMGLIEGQKVAYGGTGDAATRYIAPTILT-  338 (469)
T ss_dssp             TTSCCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTCCCCSCHHHHHHHHHHHTTSEEEECCCEETTTTEECCEEEE-
T ss_pred             CCCCcEEEEehhHHHHHHHHHHHHHHHhcCCCCcccCcccccCCHHHHHHHHHHHcCCEEEeCCccCCCCceeCCeeec-
Confidence            3333456888899888877665444432          68888877777777776311        1134567789998 


Q ss_pred             CCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         381 DLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       381 d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       339 ~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~~G~V~  403 (469)
T 3sza_A          339 DVDPQSPVMQEEIFGPVLPIVCVRSLEEAIQFINQREKPLALYMFSSNDKVIKKMIAETSSGGVA  403 (469)
T ss_dssp             SCCTTSGGGTSCCCSSEEEEEECSSHHHHHHHHHHSCCCSEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred             CCCCcchhhhccccCCeEEEEecCCHHHHHHHHHcCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            77888999999999975   678999999999999999999999999999999999999999985

>3u4j_A NAD-dependent aldehyde dehydrogenase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, tetramer; 2.00A {Sinorhizobium meliloti}

Probab=99.09  E-value=4.7e-11  Score=123.21  Aligned_cols=119  Identities=17%  Similarity=0.323  Sum_probs=99.6

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCCCceEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAAA  376 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~  376 (442)
                      +..+|+..++++|...+....++           .+||++.-..++.+.+.++.+..               .++.+.++
T Consensus       308 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~g~~~~PT  387 (528)
T 3u4j_A          308 SRLLVQEGIRDALMERLLDISRKVAFGDPLNERTKIGAMISEAHAEKVHSYVTAGITSGAELLLGGERIGREAGLYYAPT  387 (528)
T ss_dssp             EEEEEEGGGHHHHHHHHHHHHHHCCEECTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSEECTTTSCEECCE
T ss_pred             CEEEEechHHHHHHHHHHHHHHhhcCCCCCCcCCccCCccCHHHHHHHHHHHHHHHHCCCEEEeCCCcCCCCCCcEecce
Confidence            34688888888887766554443           26899999999999888887632               34556788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       388 vl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~  455 (528)
T 3u4j_A          388 VFA-GVTPDMSIAREEIFGPVLSTLTFKTADEAVALANATEFGLSASVWSTNLETALQTIRRIRAGRCW  455 (528)
T ss_dssp             EEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred             EEe-cCCCCCccccceeeccEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEE
Confidence            887 67778899999999975   678999999999999999999999999999999999999999985

>2o2p_A Formyltetrahydrofolate dehydrogenase; aldehyde dehydrogenase, FDH, oxidoreductase; 1.70A {Rattus norvegicus} PDB: 2o2q_A* 2o2r_A* 3rho_A* 3rhm_A* 3rhj_A* 3rhq_A* 3rhp_A* 3rhr_A* 3rhl_A*

Probab=99.09  E-value=3.6e-11  Score=123.71  Aligned_cols=118  Identities=28%  Similarity=0.548  Sum_probs=95.8

Q ss_pred             CcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEEEe
Q psy5844         324 GFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAVF  378 (442)
Q Consensus       324 g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v~  378 (442)
                      ..+|+..++++|...+....++           .+||+++-..++.+.+.++.+..              .++.+.++|+
T Consensus       327 rv~V~~~i~d~f~~~l~~~~~~~~vGdp~~~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTvl  406 (517)
T 2o2p_A          327 RLFVEESIHNQFVQKVVEEVEKMKIGNPLERDTNHGPQNHEAHLRKLVEYCQRGVKEGATLVCGGNQVPRPGFFFQPTVF  406 (517)
T ss_dssp             EEEEEHHHHHHHHHHHHHHHTTCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEEE
T ss_pred             EEEEeHHHHHHHHHHHHHHHHhcCCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeccccCCCCCCeECCEEE
Confidence            3577777776666555443332           26899998888888888876521              2456788999


Q ss_pred             cCCCChhhhhccccEeeeE---EeeCC--HHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         379 TKDLDKTNYVTQGLRAGTL---IRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       379 s~d~~~~~~~~~~~~~G~V---~vN~~--~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      + |.+..+.+++++.||+|   +.+++  .+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       407 ~-~v~~~~~i~~eEiFGPVl~v~~~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~~~~l~aG~V~  474 (517)
T 2o2p_A          407 T-DVEDHMYIAKEESFGPIMIISRFADGDVDAVLSRANATEFGLASGVFTRDINKALYVSDKLQAGTVF  474 (517)
T ss_dssp             E-SCCTTSGGGTSCCCSSEEEEEEECTTCSHHHHHHHTCSSCCSCCEEECSBHHHHHHHHHHCCSSEEE
T ss_pred             e-CCCCCChhhhccccccEEEEEEcCCCCHHHHHHHHhcCCCCceEEEeCCCHHHHHHHHHhcCEeEEE
Confidence            8 77778999999999975   66888  9999999999999999999999999999999999999985

>1o04_A Aldehyde dehydrogenase, mitochondrial precursor; ALDH, NAD, NADH, isomerization, oxidoreductase; HET: NAD; 1.42A {Homo sapiens} SCOP: c.82.1.1 PDB: 1nzw_A* 3inl_A* 3n80_A* 1nzz_A* 1o00_A* 1nzx_A* 1o01_A* 1o05_A 1of7_A* 1o02_A* 3inj_A* 3sz9_A* 1zum_A 2onm_A* 2onp_A* 2onn_A 2ono_A* 3n81_A 3n82_A* 3n83_A* ...

Probab=99.07  E-value=6.6e-11  Score=121.40  Aligned_cols=119  Identities=38%  Similarity=0.601  Sum_probs=98.5

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV  377 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v  377 (442)
                      +..+|+..++++|...+....+++           +||+++-..++.+++.++.+..              .++.+.++|
T Consensus       306 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTv  385 (500)
T 1o04_A          306 SRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTV  385 (500)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEE
T ss_pred             CEEEEehhHHHHHHHHHHHHHHhCcCCCcccccCccCcccCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEE
Confidence            346888888887777665544443           6899999999998888876521              245577899


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       386 l~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~  452 (500)
T 1o04_A          386 FG-DVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW  452 (500)
T ss_dssp             EE-SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred             Ee-CCCCCChhhhCcccceEEEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEE
Confidence            97 67777899999999975   678999999999999999999999999999999999999999985

>3qan_A 1-pyrroline-5-carboxylate dehydrogenase 1; proline oxidation, redox control, apoptosis, NAD binding, oxidoreductase, PSI-biology; 1.95A {Bacillus halodurans} PDB: 3rjl_A

Probab=99.07  E-value=4.9e-11  Score=123.32  Aligned_cols=124  Identities=20%  Similarity=0.356  Sum_probs=101.2

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-------------CCCCc
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-------------SDYGL  373 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-------------~~~gl  373 (442)
                      .|...+..+|+..++++|...+....++           .+||++.-..++.+.+.++.+..             .++.+
T Consensus       320 ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~~~~gG~~~~~~g~~~  399 (538)
T 3qan_A          320 KCSAGSRAVIHKDVYDEVLEKTVALAKNLTVGDPTNRDNYMGPVIDEKAFEKIMSYIEIGKKEGRLMTGGEGDSSTGFFI  399 (538)
T ss_dssp             STTCCCEEEEETTTHHHHHHHHHHHHTTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEECCCEECSSSCEE
T ss_pred             CCccCceeEEehHHHHHHHHHHHHHHHhccCCCCCCCCCCCcCccCHHHHHHHHHHHHHHHHCCeEEeCCCcCCCCCcee
Confidence            3333445688888888877666544433           26899998888888888876531             35667


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       400 ~PTvl~-~v~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~  470 (538)
T 3qan_A          400 QPTIIA-DLDPEAVIMQEEIFGPVVAFSKANDFDHALEIANNTEYGLTGAVITRNRAHIEQAKREFHVGNLY  470 (538)
T ss_dssp             CCEEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred             CCeeee-cCCCCChhhCCCcCCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCeeEEE
Confidence            889998 66777899999999975   678999999999999999999999999999999999999999985

>3k2w_A Betaine-aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 1.90A {Pseudoalteromonas atlantica T6C}

Probab=99.07  E-value=6e-11  Score=121.72  Aligned_cols=119  Identities=24%  Similarity=0.410  Sum_probs=97.4

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------------CCCCc
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------------SDYGL  373 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------------~~~gl  373 (442)
                      +..+|+..++++|...+....+++           +||++.-..++.+.+.++.+..                  .++.+
T Consensus       295 ~rvlV~~~i~d~f~~~l~~~~~~~~vg~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~  374 (497)
T 3k2w_A          295 ERLYVHASVYDEFMAKFLPLVKGLKVGDPMDADSQMGPKCNQREIDNIDHIVHEAIKQGATVATGGKTATVEGFEGGCWY  374 (497)
T ss_dssp             EEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHHCEEEECCC---------CCCC
T ss_pred             cEEEEeHHHHHHHHHHHHHHHHhccCCCCCCCCCccccCcCHHHHHHHHHHHHHHHHCCCEEEecCccCCccccCCCcee
Confidence            346788888877776665444433           6888888888888887776521                  35567


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       375 ~Ptvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~  445 (497)
T 3k2w_A          375 EPTVLV-DVKQDNIVVHEETFGPILPIVKVSSMEQAIEFCNDSIYGLSAYVHTQSFANINQAISDLEVGEVY  445 (497)
T ss_dssp             CCEEEE-SCCTTSHHHHSCCCSSEEEEEEESCHHHHHHHHTCSSEESEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred             CCEEEe-cCCCCcHhhcCCccCcEEEEEEeCCHHHHHHHHhcCCCCcEEEEEcCCHHHHHHHHHhCCeeEEE
Confidence            889998 67778899999999975   778999999999999999999999999999999999999999985

>4e4g_A Methylmalonate-semialdehyde dehydrogenase; structural genomics, protein structure INI nysgrc, PSI-biology; 2.90A {Sinorhizobium meliloti}

Probab=99.06  E-value=4.9e-11  Score=122.86  Aligned_cols=118  Identities=18%  Similarity=0.217  Sum_probs=96.2

Q ss_pred             Ccccccc-eeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHh------------------cCCCCc
Q psy5844         324 GFYVQPT-VFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERAN------------------NSDYGL  373 (442)
Q Consensus       324 g~~v~pt-i~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an------------------~~~~gl  373 (442)
                      ..+|+.. ++++|...+....+++           +||++.-..++.+.+.++.+.                  ..++.+
T Consensus       309 rvlV~~~~i~d~f~~~l~~~~~~~~vG~~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~~g~~~  388 (521)
T 4e4g_A          309 VAVPVGEETANRLIDKLVPMVESLRIGPYTDEKADMGPVVTKEAEQRIRSLIDSGIEQGAKLVVDGRDFKLQGYENGHFI  388 (521)
T ss_dssp             EEEEBSHHHHHHHHHHHHHHHHTCCBCCTTCTTCSBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCCTTCTTSCCC
T ss_pred             EEEEeCchHHHHHHHHHHHHHHhccCCCCCCccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEecCcccCCCcCCCCcEE
Confidence            3577777 7777766665444443           688888888888888777652                  134567


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       389 ~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~  459 (521)
T 4e4g_A          389 GGCLFD-DVTPDMDIYKTEIFGPVLSVVRARNYEEALSLPMKHEYGNGVAIYTRDGDAARDFASRINIGMVG  459 (521)
T ss_dssp             CCEEEE-SCCTTSHHHHSCCCSSEEEECCBSSHHHHHHHHHHSSEESEEEEECSBHHHHHHHHHHCCCSEEE
T ss_pred             CCEEEE-cCCCCCHhhcCcccCcEEEEEEeCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCeeeEE
Confidence            889998 77778899999999976   568899999999999999999999999999999999999999985

>1a4s_A ALDH, betaine aldehyde dehydrogenase; oxidoreductase, aldehyde oxidation; 2.10A {Gadus callarias} SCOP: c.82.1.1 PDB: 1bpw_A*

Probab=99.06  E-value=9.3e-11  Score=120.43  Aligned_cols=127  Identities=23%  Similarity=0.415  Sum_probs=102.0

Q ss_pred             eCCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc---------------
Q psy5844         315 AGGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN---------------  368 (442)
Q Consensus       315 ~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~---------------  368 (442)
                      .|..|...+..+|+..++++|...+....+++           +||+++-..++.+++.++.+..               
T Consensus       293 ~GQ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~  372 (503)
T 1a4s_A          293 QGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPS  372 (503)
T ss_dssp             GGCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCS
T ss_pred             CCCCCcCCcEEEEehHHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccc
Confidence            34444444557888888888777665554443           5899998889988888876521               


Q ss_pred             -----CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccc
Q psy5844         369 -----SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT  440 (442)
Q Consensus       369 -----~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~  440 (442)
                           .++.+.++|++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+
T Consensus       373 ~~~~~~g~~~~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~  451 (503)
T 1a4s_A          373 DPKLKNGYFMSPCVLD-NCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT  451 (503)
T ss_dssp             SGGGTTSCCBCCEEEE-SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSE
T ss_pred             cccccCCceeCCEEEe-cCCCCCHHHhccccCceEEEEecCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHHCceeE
Confidence                 24456788987 67777899999999975   6789999999999999999999999999999999999999999


Q ss_pred             cC
Q psy5844         441 VW  442 (442)
Q Consensus       441 v~  442 (442)
                      ||
T Consensus       452 V~  453 (503)
T 1a4s_A          452 CY  453 (503)
T ss_dssp             EE
T ss_pred             EE
Confidence            85

>3lns_A Benzaldehyde dehydrogenase; oxidoreductase, NADP+, class 3 aldehyde dehyd adduct, covalent catalysis, mandelate racemase pathway; HET: ZBZ NAP; 2.50A {Pseudomonas putida} PDB: 3lv1_A*

Probab=99.06  E-value=6.6e-11  Score=120.25  Aligned_cols=119  Identities=18%  Similarity=0.256  Sum_probs=99.8

Q ss_pred             CCcccccceeccCcchhHHHHHhh------cCCcccccccCCHHHHHHHHh----------cCCCCceEEEecCCCChhh
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI------FGPVQQLIRFSSIEEVIERAN----------NSDYGLAAAVFTKDLDKTN  386 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~------fgPvl~v~~~~~~~eai~~an----------~~~~gl~~~v~s~d~~~~~  386 (442)
                      +..+|+..++++|...+....+++      +||+++-..++.+++.++.+.          ..++.+.++|++ |.+..+
T Consensus       274 ~rvlV~~~i~d~f~~~l~~~~~~~~p~~~~~gpli~~~~~~rv~~~i~~a~~~~~~gg~~~~~g~~~~Ptvl~-~v~~~~  352 (457)
T 3lns_A          274 DYLYVHYSVKDALLERLVERVKTELPEINSTGKLVTERQVQRLVSLLEATQGQVLVGSQADVSKRALSATVVD-GVEWND  352 (457)
T ss_dssp             EEEEEEGGGHHHHHHHHHHHHHHHCCSTTTTCCCSSHHHHHHHHHHHHHCCSEEEECCCEEGGGTEECCEEEE-SCCTTS
T ss_pred             ceEEEcHHHHHHHHHHHHHHHHhcCCCcccccCCCCHHHHHHHHHHHHhcCCeEEeCCccCCCCceeCCEEEe-cCCCCC
Confidence            346888899888887776555554      789999888888888888731          124456788988 677788


Q ss_pred             hhccccEeeeE---EeeCCHHHHHHhhcc-CCccceeEEeccChhHHHHHHccccccccC
Q psy5844         387 YVTQGLRAGTL---IRFSSIEEVIERANN-SDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       387 ~~~~~~~~G~V---~vN~~~~~av~~an~-~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+++++.||+|   +.+++.+||++.+|+ ++|||++||||+|..++.++++++++|+||
T Consensus       353 ~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~  412 (457)
T 3lns_A          353 PLMSEELFGPILPVLEFDSVRTAIDQVNKHHPKPLAVYVFGKDMDVAKGIINQIQSGDAQ  412 (457)
T ss_dssp             GGGSSCCCSSEEEEEEESCHHHHHHHHHHHSCSCSEEEEECSCHHHHHHHHHTSCCSEEE
T ss_pred             hhhcCcccCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEEECCCHHHHHHHHHhCCcceEE
Confidence            99999999975   678999999999999 999999999999999999999999999985

>4dng_A Uncharacterized aldehyde dehydrogenase ALDY; structural genomics, protein structure initiative, nysgrc, P biology; 2.50A {Bacillus subtilis}

Probab=99.05  E-value=1.1e-10  Score=119.54  Aligned_cols=117  Identities=26%  Similarity=0.409  Sum_probs=97.2

Q ss_pred             cccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhcC-----------CCCceEEEecCCC
Q psy5844         325 FYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANNS-----------DYGLAAAVFTKDL  382 (442)
Q Consensus       325 ~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~~-----------~~gl~~~v~s~d~  382 (442)
                      .+|+..++++|...+....++           .+||+++-..++.+.+.++.+...           ++.+.++|++ |.
T Consensus       293 vlV~~~i~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gg~~~g~~~~Ptvl~-~v  371 (485)
T 4dng_A          293 IIVHQDVYDEFVEKFTARVKQLPYGDQTDPKTVVGPLINERQIEKALEIIEQAKTDGIELAVEGKRVGNVLTPYVFV-GA  371 (485)
T ss_dssp             EEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEEE-SC
T ss_pred             EEEeHHHHHHHHHHHHHHHHhccCCCCCcCCCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCCCCCcEECCEEEe-cC
Confidence            578888887777666544443           268899888888888888876432           4556788887 77


Q ss_pred             ChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         383 DKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       383 ~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       372 ~~~~~i~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  434 (485)
T 4dng_A          372 DNNSKIAQTELFAPIATIIKAGSDQEAIDMANDTEYGLSSAVFTSDLEKGEKFALQIDSGMTH  434 (485)
T ss_dssp             CTTSHHHHCCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHTTSCSSEEE
T ss_pred             CCCChhhcCccccceEEEEEeCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhcCcceEE
Confidence            788899999999975   678999999999999999999999999999999999999999985

>3r31_A BADH, betaine aldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.15A {Agrobacterium tumefaciens}

Probab=99.05  E-value=5e-11  Score=122.66  Aligned_cols=119  Identities=29%  Similarity=0.496  Sum_probs=98.7

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------------CCCCce
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------------SDYGLA  374 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------------~~~gl~  374 (442)
                      +..+|+..++++|...+....++           .+||+++-..++.+.+.|+.+..                 .++.+.
T Consensus       296 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~v~~gG~~~~~~~~~g~~~~  375 (517)
T 3r31_A          296 TRVFVQKKAKARFLENLKRRTEAMILGDPLDYATHLGPLVSKAQQEKVLSYIEKGKAEGATLITGGGIPNNVAGEGAYVQ  375 (517)
T ss_dssp             EEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCBSCHHHHHHHHHHHHHHHHHTCEEEECCSCCSSCCSSSBCCC
T ss_pred             ceEEEeHHHHHHHHHHHHHHHHhccCCCCCCcCCcccCCcCHHHHHHHHHHHHHHHhCCCEEEECCccCcccCCCCceEC
Confidence            44688888888877766554444           36899998899988888877521                 245567


Q ss_pred             EEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         375 AAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       375 ~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++|++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       376 PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~  445 (517)
T 3r31_A          376 PTVFA-DVTDDMTIAREEIFGPVMCVLDFDDEDEVLARANATEFGLAGGVFTADLARAHRVVDGLEAGTLW  445 (517)
T ss_dssp             CEEEE-EECTTSHHHHSCCSSSEEEEEEECCHHHHHHHHHCSSEESEEEEECSCHHHHHHHHHHSCCSEEE
T ss_pred             CEEEe-cCCCCCccccceeeccEEEEEEeCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHHCCcceEE
Confidence            88887 66677899999999975   778999999999999999999999999999999999999999985

>1bxs_A Aldehyde dehydrogenase; retinal, class 1, tetramer, NAD, cytosolic, oxidoreductase; HET: NAD; 2.35A {Ovis aries} SCOP: c.82.1.1 PDB: 1o9j_A* 1bi9_A*

Probab=99.05  E-value=8.2e-11  Score=120.68  Aligned_cols=119  Identities=29%  Similarity=0.545  Sum_probs=96.3

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV  377 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v  377 (442)
                      +..+|+..++++|...+....++           .+||+++-..++.+++.++.+..              .++.+.++|
T Consensus       307 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~~~~PTv  386 (501)
T 1bxs_A          307 SRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTV  386 (501)
T ss_dssp             CEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEE
T ss_pred             CEEEEchhHHHHHHHHHHHHHHhcCCCCCcccCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCeeCCEE
Confidence            44577777777776665544333           25899998888888888876521              244567788


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       387 l~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~  453 (501)
T 1bxs_A          387 FS-DVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVW  453 (501)
T ss_dssp             EE-SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred             Ee-cCCCCCHHHhcccccceEEEEEeCCHHHHHHHHhcCCCCeeEEEEcCCHHHHHHHHHhcCeeEEE
Confidence            87 66777899999999975   778999999999999999999999999999999999999999985

>4f3x_A Putative aldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology; HET: MSE NAD; 2.01A {Sinorhizobium meliloti} PDB: 4dal_A*

Probab=99.05  E-value=3e-11  Score=123.86  Aligned_cols=119  Identities=24%  Similarity=0.445  Sum_probs=97.0

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CCCCceEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAAA  376 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~~  376 (442)
                      +..+|+..++++|...+....++           .+||++.-..++.+.+.++.+..               .++.+.++
T Consensus       307 ~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~d~~~~~Gpli~~~~~~~v~~~i~~a~~~Ga~~v~~gG~~~~~~g~~~~PT  386 (498)
T 4f3x_A          307 CRIYAEAGIYEKLVADLTSAVSTIRYNLDDDTENEIGPLISRRQRDRVASFVERAADQKHIEITTGGRTGSDEGFFFQPT  386 (498)
T ss_dssp             EEEEEETTTHHHHHHHHHHHHTTCCCSCSSGGGCSSCCCSCHHHHHHHHHHHHHHHHSTTCEEEECCSBCCSSSCCBCCE
T ss_pred             ceEEecHHHHHHHHHHHHHHHHhcccCCCccccCccccCcCHHHHHHHHHHHHHHHHCCCCEEEECCccCCCCCcEECCE
Confidence            44677778877777665544333           26899998888888888876532               23456779


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       387 vl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~GL~a~v~t~d~~~a~~~a~~l~aG~V~  454 (498)
T 4f3x_A          387 VVA-GATQEDEIVRREVFGPVVSVTRFTGKDDAVAWANDSDYGLASSVWTKDISKAMRAASRLQYGCTW  454 (498)
T ss_dssp             EEE-SCCTTSHHHHSCCCSSEEEEEEECTTSCHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred             Eee-cCCCCChhhCCceeCcEEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            998 67777899999999975   678999999999999999999999999999999999999999985

>3b4w_A Aldehyde dehydrogenase; RV0223C-NAD complex, structural genomics, PSI-2, protein STR initiative; HET: NAD GOL; 1.80A {Mycobacterium tuberculosis}

Probab=99.04  E-value=1e-10  Score=119.95  Aligned_cols=119  Identities=24%  Similarity=0.362  Sum_probs=98.1

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc----------------CCCCceE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN----------------SDYGLAA  375 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~----------------~~~gl~~  375 (442)
                      +..+|+..++++|...+....+++           +||+++-..++.+++.++.+..                .++.+.+
T Consensus       292 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~g~~~~P  371 (495)
T 3b4w_A          292 TRILAPRSRYDEIVAAVTNFVTALPVGPPSDPAAQIGPLISEKQRTRVEGYIAKGIEEGARLVCGGGRPEGLDNGFFIQP  371 (495)
T ss_dssp             EEEEEEGGGHHHHHHHHHHHHHHSCBCCTTCTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSCCTTCTTSCCCCC
T ss_pred             eEEEEcccHHHHHHHHHHHHHHhcCCCCCccCCCccCCCcCHHHHHHHHHHHHHHHhCCCEEEecCcccccccCCceeCC
Confidence            346888888888777665544443           6899999889998888876521                2445678


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       372 Tvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~  440 (495)
T 3b4w_A          372 TVFA-DVDNKMTIAQEEIFGPVLAIIPYDTEEDAIAIANDSVYGLAGSVWTTDVPKGIKISQQIRTGTYG  440 (495)
T ss_dssp             EEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCCEEECSCHHHHHHHHHHSCCSCCE
T ss_pred             EEec-CCCCCChhhhcccccceEEEEecCCHHHHHHHHhcCCCCeEEEEECCCHHHHHHHHHhCCEeEEE
Confidence            8887 66777899999999975   778999999999999999999999999999999999999999985

>3r64_A NAD dependent benzaldehyde dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.57A {Corynebacterium glutamicum}

Probab=99.04  E-value=9e-11  Score=120.75  Aligned_cols=123  Identities=26%  Similarity=0.346  Sum_probs=100.0

Q ss_pred             ccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhcC-----------CCCceEE
Q psy5844         319 RAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANNS-----------DYGLAAA  376 (442)
Q Consensus       319 ~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~~-----------~~gl~~~  376 (442)
                      |...+..+|+..++++|...+....+++           +||+++-..++.+++.++.+...           ++.+.++
T Consensus       294 C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Pt  373 (508)
T 3r64_A          294 CMSINRVIVDAAVHDEFLEKFVEAVKNIPTGDPSAEGTLVGPVINDSQLSGLKEKIELAKKEGATVQVEGPIEGRLVHPH  373 (508)
T ss_dssp             TTCCSEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSSSCCBCCCSCHHHHHHHHHHHHHHHTTTCEEEECCCEETTEECCE
T ss_pred             cccCcEEEEehhHHHHHHHHHHHHHHhccCCCCccCCCcccCCCCHHHHHHHHHHHHHHHHcCCEEEecCCCCCcEEecE
Confidence            3333456888888877776665544442           78999998999988888876432           3446778


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       374 vl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~  441 (508)
T 3r64_A          374 VFS-DVTSDMEIAREEIFGPLISVLKADDEAHAAELANASDFGLSAAVWSKDIDRAAQFALQIDSGMVH  441 (508)
T ss_dssp             EEE-EECTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTSSSCCSCEEEECSCHHHHHHHHTTSCSSEEE
T ss_pred             EEe-cCCCCChhhcccccCceEEEEEeCCHHHHHHHHhCCCCCcEEEEEcCCHHHHHHHHHhCCcceEE
Confidence            887 66777899999999975   678999999999999999999999999999999999999999985

>1uzb_A 1-pyrroline-5-carboxylate dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.4A {Thermus thermophilus} SCOP: c.82.1.1 PDB: 2eiw_A 2bhq_A* 2bhp_A* 2bja_A* 2bjk_A* 2ehq_A* 2ehu_A* 2eii_A* 2eit_A* 2ej6_A 2ejd_A* 2ejl_A 2iy6_A* 2j40_A* 2j5n_A*

Probab=99.03  E-value=1.1e-10  Score=120.36  Aligned_cols=119  Identities=22%  Similarity=0.389  Sum_probs=96.3

Q ss_pred             CCcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHhc-------------CCCCceEEEec
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERANN-------------SDYGLAAAVFT  379 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an~-------------~~~gl~~~v~s  379 (442)
                      +..+|+..++++|...+....++          .+||+++-..++.+.+.++.+..             .++.+.++|++
T Consensus       326 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~Gpli~~~~~~~v~~~i~~a~~~G~v~~gg~~~~~~g~~~~Ptvl~  405 (516)
T 1uzb_A          326 SRLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFT  405 (516)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEE
T ss_pred             cEEEEchHHHHHHHHHHHHHHHhccCCCCccccccCCCCCHHHHHHHHHHHHHHHHCCCEEECCccCCCCCcEECCEEEE
Confidence            33577777777666655444333          36899998888888888876521             24557788987


Q ss_pred             CCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         380 KDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       380 ~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                       |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       406 -~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~  470 (516)
T 1uzb_A          406 -EVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY  470 (516)
T ss_dssp             -SCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEE
T ss_pred             -CCCCCCHhhhccccCceEEEEEeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCEeEEE
Confidence             67778899999999975   678999999999999999999999999999999999999999985

>3pqa_A Lactaldehyde dehydrogenase; structural genomics, protein structure initiative, nysgrc, P biology, oxidoreductase; 1.50A {Methanocaldococcus jannaschii} PDB: 3rhd_A*

Probab=99.03  E-value=8.4e-11  Score=120.18  Aligned_cols=117  Identities=23%  Similarity=0.374  Sum_probs=96.5

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc-----------CCCCceEEEecC
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFTK  380 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s~  380 (442)
                      +..+|+..++++|...+....+++           +||+++-..++.+.+.++.+..           .++.+.++|+  
T Consensus       279 ~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~v~~gG~~~g~~~~Ptvl--  356 (486)
T 3pqa_A          279 GMILVDESIADKFIEMFVNKAKVLNVGNPLDEKTDVGPLISVEHAEWVEKVVEKAIDEGGKLLLGGKRDKALFYPTIL--  356 (486)
T ss_dssp             EEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEETTEECCEEE--
T ss_pred             cEEEEeHHHHHHHHHHHHHHHHhcccCCCCcCCCCcCCCCCHHHHHHHHHHHHHHHHCCCEEEecCCCCCcEeccEEE--
Confidence            346888888887776665544432           6899998899998888887632           2345678888  


Q ss_pred             CCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         381 DLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       381 d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |.+..+.+++++.||+|   +.+++ +||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       357 ~v~~~~~i~~eEiFGPVl~v~~~~~-deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~  420 (486)
T 3pqa_A          357 EVDRDNILCKTETFAPVIPIIRTNE-EEMIDIANSTEYGLHSAIFTNDINKSLKFAENLEFGGVV  420 (486)
T ss_dssp             ECCTTSGGGTCCCCSSEEEEEEECH-HHHHHHHTCSSCCSEEEEECSBHHHHHHHHHHSCSSEEE
T ss_pred             eCCCCChhhcccccccEEEEEEEcH-HHHHHHHhcCCCCcEEEEECCCHHHHHHHHHhCCcceEE
Confidence            77788899999999975   66788 999999999999999999999999999999999999985

>2w8n_A Succinate-semialdehyde dehydrogenase, mitochondrial; mitochondrion, oxidoreductase, transit peptide, disease mutation, SSA, NAD, ssadh; 2.00A {Homo sapiens} PDB: 2w8o_A 2w8p_A 2w8q_A 2w8r_A*

Probab=99.03  E-value=1.5e-10  Score=118.47  Aligned_cols=119  Identities=23%  Similarity=0.301  Sum_probs=97.9

Q ss_pred             CCcccccceeccCcchhHHHHHh-h-----------cCCcccccccCCHHHHHHHHhc-------------CCC-CceEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-I-----------FGPVQQLIRFSSIEEVIERANN-------------SDY-GLAAA  376 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-~-----------fgPvl~v~~~~~~~eai~~an~-------------~~~-gl~~~  376 (442)
                      +..+|+..++++|...+....++ +           +||+++-..++.+++.++.+.+             .++ .+.++
T Consensus       296 ~rvlV~~~i~d~f~~~l~~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gg~~~~~g~~~~~Pt  375 (487)
T 2w8n_A          296 NQFLVQRGIHDAFVKAFAEAMKKNLRVGNGFEEGTTQGPLINEKAVEKVEKQVNDAVSKGATVVTGGKRHQLGKNFFEPT  375 (487)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHHHHCCBSCTTSTTCCBCCCSSHHHHHHHHHHHHHHHTTTCEEEECCSBCTTCTTCBCCE
T ss_pred             CEEEEcccHHHHHHHHHHHHHHhhcccCCcccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCCCceECCE
Confidence            34577888887777766555555 3           6889998888888888887531             144 56788


Q ss_pred             EecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         377 VFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       377 v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |++ |.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       376 vl~-~v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~  443 (487)
T 2w8n_A          376 LLC-NVTQDMLCTHEETFGPLAPVIKFDTEEEAIAIANAADVGLAGYFYSQDPAQIWRVAEQLEVGMVG  443 (487)
T ss_dssp             EEE-EECGGGGTTCTTCCSSEEEEEEESCHHHHHHHHTCTTCCSEEEEECCCHHHHHHHHHHSCSSEEE
T ss_pred             EEe-cCCCcchhhhcccccceEEEEEeCCHHHHHHHHhCCCCCceEEEeCCCHHHHHHHHHhCCeeeEE
Confidence            887 66677899999999975   678999999999999999999999999999999999999999985

>2j6l_A Aldehyde dehydrogenase family 7 member A1; NAD, reductase, oxidoreductase, lysine catabolism; HET: NAI; 1.3A {Homo sapiens} PDB: 2jg7_A*

Probab=99.02  E-value=1.5e-10  Score=118.77  Aligned_cols=119  Identities=22%  Similarity=0.370  Sum_probs=96.7

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV  377 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v  377 (442)
                      +..+|+..++++|...+....+++           +||+++-..++.+.+.++.+..              .++.+.++|
T Consensus       307 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~v~~gg~~~~~~g~~~~PTv  386 (500)
T 2j6l_A          307 RRLFIHESIHDEVVNRLKKAYAQIRVGNPWDPNVLYGPLHTKQAVSMFLGAVEEAKKEGGTVVYGGKVMDRPGNYVEPTI  386 (500)
T ss_dssp             EEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSSCBCCEE
T ss_pred             cEEEEcHHHHHHHHHHHHHHhhhcccCCcccCCCccccCCCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCCEEcCEE
Confidence            345777778777776665444443           6889998888888888877531              244567889


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHH--ccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVT--QGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~--~~l~~G~v~  442 (442)
                      ++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.+++  .++++|+||
T Consensus       387 l~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~~~~~~G~V~  455 (500)
T 2j6l_A          387 VT-GLGHDASIAHTETFAPILYVFKFQNEEEVFAWNNEVKQGLSSSIFTKDLGRIFRWLGPKGSDCGIVN  455 (500)
T ss_dssp             EE-SCCTTCHHHHSCCSSSEEEEEEECCHHHHHHHHHTSSCCSEEEEECCCHHHHHHHHSTTSCCSSEEE
T ss_pred             EE-CCCCcChhhcCcccCceEEEEeeCCHHHHHHHHhCCCCCcEEEEECCCHHHHHHHHhhccCCeeEEE
Confidence            97 66678899999999965   778999999999999999999999999999999999  779999985

>2imp_A Lactaldehyde dehydrogenase; protein-lactate-NADH ternary complex, oxidoreductase; HET: NAI; 2.10A {Escherichia coli} PDB: 2ilu_A* 2hg2_A* 2opx_A*

Probab=99.02  E-value=1.8e-10  Score=117.83  Aligned_cols=124  Identities=22%  Similarity=0.431  Sum_probs=98.6

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhc--------------CCC
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANN--------------SDY  371 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~--------------~~~  371 (442)
                      .|...+..+|+..++++|...+....++            .+||+++-..++.+++.++.+.+              .++
T Consensus       284 ~C~a~~rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~g~  363 (479)
T 2imp_A          284 VCNCAERVYVQKGIYDQFVNRLGEAMQAVQFGNPAERNDIAMGPLINAAALERVEQKVARAVEEGARVAFGGKAVEGKGY  363 (479)
T ss_dssp             CSSSCSEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCSSCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCCCCSSSC
T ss_pred             cCcCCcEEEEehhhHHHHHHHHHHHHHhcccCCccccCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEECCcccCCCCc
Confidence            3433445677888877777666544433            25888888888888888876521              134


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       364 ~~~Ptvl~-~v~~~~~~~~eEiFGPVl~v~~~~~~~eAi~~aN~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~  436 (479)
T 2imp_A          364 YYPPTLLL-DVRQEMSIMHEETFGPVLPVVAFDTLEDAISMANDSDYGLTSSIYTQNLNVAMKAIKGLKFGETY  436 (479)
T ss_dssp             CCCCEEEE-SCCTTSGGGGSCCCSSEEEEEEESSHHHHHHHHHCSSEESEEEEECCCHHHHHHHHHHCCSSEEE
T ss_pred             eECCEEEe-CCCCCCHHHhCccCCceEEEEeeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCEeEEE
Confidence            56788887 67777899999999975   678999999999999999999999999999999999999999985

>3ty7_A Putative aldehyde dehydrogenase SAV2122; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.40A {Staphylococcus aureus}

Probab=99.02  E-value=2.1e-10  Score=117.22  Aligned_cols=120  Identities=23%  Similarity=0.398  Sum_probs=98.3

Q ss_pred             CCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHh-----------------cCCCCc
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERAN-----------------NSDYGL  373 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an-----------------~~~~gl  373 (442)
                      .+..+|+..++++|...+....+++           +||+++-..++.+++.++.+.                 ..++.+
T Consensus       285 ~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~~~g~~~  364 (478)
T 3ty7_A          285 GTRVLVPNKIKDAFLAELKEQFSQVRVGNPREDGTQVGPIISKKQFDQVQNYINKGIEEGAELFYGGPGKPEGLEKGYFA  364 (478)
T ss_dssp             CCEEEEETTTHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSSCCTTCCSSCCC
T ss_pred             CCeEEEcHHHHHHHHHHHHHHHHhccCCCCCCCCCccCCCcCHHHHHHHHHHHHHHHHCCCEEEecCccCccccCCCcee
Confidence            3446888888887777665544432           689999888888888887652                 124456


Q ss_pred             eEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         374 AAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       374 ~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++|++ |....+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       365 ~Ptvl~-~v~~~~~~~~eE~FGPvl~v~~~~~~~eAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~~G~v~  435 (478)
T 3ty7_A          365 RPTIFI-NVDNQMTIAQEEIFGPVMSVITYNDLDEAIQIANDTKYGLAGYVIGKDKETLHKVARSIEAGTVE  435 (478)
T ss_dssp             CCEEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECSCHHHHHHHHHHSCSSEEE
T ss_pred             CCEEEe-cCCCCCcccCceeECceeEEEecCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcCeEE
Confidence            788887 67777889999999975   678999999999999999999999999999999999999999985

>1wnd_A Putative betaine aldehyde dehydrogenase; NADH, fluorescence, kinetics, oxidor; 2.10A {Escherichia coli} SCOP: c.82.1.1 PDB: 1wnb_A

Probab=99.02  E-value=1.2e-10  Score=119.26  Aligned_cols=124  Identities=24%  Similarity=0.464  Sum_probs=100.3

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc---------------CCC
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN---------------SDY  371 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~---------------~~~  371 (442)
                      .|...+..+|+..++++|...+....+++           +||+++-..++.+++.++.+..               .++
T Consensus       300 ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~G~a~~~~gG~~~~~~g~  379 (495)
T 1wnd_A          300 DCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGY  379 (495)
T ss_dssp             STTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSC
T ss_pred             CCCCCcEEEecchhHHHHHHHHHHHHHhccCCCCccCCCCccCCCCHHHHHHHHHHHHHHHhCCCeEEEECCcccCCCCC
Confidence            34444556888888888777665544443           6899998889888888876521               134


Q ss_pred             CceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         372 GLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       372 gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.++|++ |.+..+.+++++.||+|   ..+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       380 ~~~PTvl~-~v~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~  452 (495)
T 1wnd_A          380 YYAPTLLA-GALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW  452 (495)
T ss_dssp             CBCCEEEE-CCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred             eeCCEEEe-CCCCCChhhhccccCceEEEEEeCCHHHHHHHHhcCCCCeeEEEECCCHHHHHHHHHhCCcceEE
Confidence            45778887 67778899999999975   778999999999999999999999999999999999999999985

>3etf_A Putative succinate-semialdehyde dehydrogenase; center for ST genomics of infectious diseases, oxidoreductase, csgid; 1.85A {Salmonella typhimurium} PDB: 3efv_A

Probab=99.02  E-value=1.4e-10  Score=118.20  Aligned_cols=119  Identities=20%  Similarity=0.271  Sum_probs=96.4

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV  377 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v  377 (442)
                      +..+|+..++++|...+....++           .+||++.-..++.+.+.++.+..              .++.+.++|
T Consensus       272 ~rvlV~~~i~d~f~~~l~~~~~~~~~G~p~~~~~~~gpli~~~~~~~v~~~i~~a~~~ga~~~~gg~~~~~~g~~~~Ptv  351 (462)
T 3etf_A          272 KRFIVEEGIAQAFTDRFVAAAAALKMGDPLVEENDLGPMARFDLRDELHQQVQASVAEGARLLLGGEKIAGEGNYYAATV  351 (462)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHHHCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCSSSSCCBCCEE
T ss_pred             cEEEEehhHHHHHHHHHHHHHHhhcCCCCccccCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCcccCCCCcEEeeEE
Confidence            34577777777776665544443           26888888888888888876521              345567899


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ++ |.+..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       352 l~-~v~~~~~~~~eE~FGPVl~v~~~~~~deAi~~an~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~  418 (462)
T 3etf_A          352 LA-DVTPDMTAFRQELFGPVAAITVAKDAAHALALANDSEFGLSATIFTADDTLAAEMAARLECGGVF  418 (462)
T ss_dssp             EE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSCEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred             EE-CCCCCChhhcCceeCcEEEEEEcCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHhCCcceEE
Confidence            98 66777889999999975   678999999999999999999999999999999999999999985

>1uxt_A Glyceraldehyde-3-phosphate dehydrogenase (NADP+); GAPN, ALDH, glucose 1-phosphate, glycolysis, regulation, catatysis, oxidoreductase; HET: G1P NAD; 2.2A {Thermoproteus tenax} SCOP: c.82.1.1 PDB: 1uxp_A* 1uxq_A* 1uxr_A* 1uxn_A* 1uxu_A* 1uxv_A* 1ky8_A*

Probab=99.01  E-value=9.6e-11  Score=120.27  Aligned_cols=118  Identities=19%  Similarity=0.255  Sum_probs=95.5

Q ss_pred             CcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc-----------CC-CCceEEEecC
Q psy5844         324 GFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN-----------SD-YGLAAAVFTK  380 (442)
Q Consensus       324 g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~-----------~~-~gl~~~v~s~  380 (442)
                      ..+|+..++++|...+....++           .+||+++-..++.+++.++.+..           .+ +.+.++|++ 
T Consensus       302 rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~g~~~~~Ptvl~-  380 (501)
T 1uxt_A          302 LVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTFVE-  380 (501)
T ss_dssp             EEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCBCSSSCBCCEEEE-
T ss_pred             EEEeccchHHHHHHHHHHHHHhccCCCccccCCcccCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCCceECCEEEe-
Confidence            3567777776666555444333           26899999899988888887632           13 557789987 


Q ss_pred             CCC---hhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         381 DLD---KTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       381 d~~---~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      |.+   ..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       381 ~v~~~~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~  448 (501)
T 1uxt_A          381 APADRVKDMVLYKREVFAPVALAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIY  448 (501)
T ss_dssp             CCHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEE
T ss_pred             CCCCCCCcCHHHhCcccCceEEEEeeCCHHHHHHHHhcCCCCcEEEEeCCCHHHHHHHHHhCCEeeEE
Confidence            666   67889999999975   678999999999999999999999999999999999999999985

>2d4e_A 5-carboxymethyl-2-hydroxymuconate semialdehyde dehydrogenase; HPCC; HET: NAD; 2.10A {Thermus thermophilus}

Probab=99.01  E-value=1.6e-10  Score=118.97  Aligned_cols=120  Identities=25%  Similarity=0.407  Sum_probs=97.0

Q ss_pred             CCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------------
Q psy5844         321 GDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------------  368 (442)
Q Consensus       321 ~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------------  368 (442)
                      ..+..+|+..++++|...+....++           .+||+++-..++.+.+.++.+..                     
T Consensus       307 a~~rvlV~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~rv~~~i~~a~~~Ga~~~~gG~~~~~~~~~~~~  386 (515)
T 2d4e_A          307 ASSRLLVEEKIFEDFVGKVVERARAIRVGHPLDPETEVGPLIHPEHLQRVLGYVEAGKREGARLLVGGERAKTSFRGEDL  386 (515)
T ss_dssp             CCCEEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCSBCCBCTTSCBC
T ss_pred             CCeEEEEehhHHHHHHHHHHHHHhhcccCCcccccCccCCCcCHHHHHHHHHHHHHHHHCCCEEEeCCcccccccccccc
Confidence            3344678888877777666544433           26899998888888888876521                     


Q ss_pred             -CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         369 -SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       369 -~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                       .++.+.++|+++  +..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       387 ~~g~~~~PTvl~~--~~~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~  462 (515)
T 2d4e_A          387 SRGNYLLPTVFVG--ENHMKIAQEEIFGPVLVAIPFKDEEEALRKANDTKYGLAAYVFTRDLERAHRLALELEAGMVY  462 (515)
T ss_dssp             TTTTCBCCEEEEC--CTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEE
T ss_pred             CCCceeCCEEEeC--CCCChhhhccccCCceEEEeeCCHHHHHHHHhcCCCCceEEEECCCHHHHHHHHHhCCeeEEE
Confidence             244567899984  667899999999975   778999999999999999999999999999999999999999985

>1euh_A NADP dependent non phosphorylating glyceraldehyde-3-phosphate dehydrogenase; oxidoreductase; 1.82A {Streptococcus mutans} SCOP: c.82.1.1 PDB: 1qi6_A 2euh_A* 2id2_A* 2qe0_A* 2esd_A* 1qi1_A*

Probab=98.99  E-value=1.7e-10  Score=117.75  Aligned_cols=118  Identities=25%  Similarity=0.372  Sum_probs=96.9

Q ss_pred             CcccccceeccCcchhHHHHHhh----------cCCcccccccCCHHHHHHHHhcC-----------CCCceEEEecCCC
Q psy5844         324 GFYVQPTVFANVRDDMKIAREEI----------FGPVQQLIRFSSIEEVIERANNS-----------DYGLAAAVFTKDL  382 (442)
Q Consensus       324 g~~v~pti~~~~~~~~~~~~~e~----------fgPvl~v~~~~~~~eai~~an~~-----------~~gl~~~v~s~d~  382 (442)
                      ..+|+..++++|...+....+++          +||+++-..++.+++.++.+.+.           ++.+.++|++ |.
T Consensus       289 rv~V~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gG~~~g~~~~Ptvl~-~v  367 (475)
T 1euh_A          289 RVLVMESVADELVEKIREKVLALTIGNPEDDADITPLIDTKSADYVEGLINDANDKGATALTEIKREGNLICPILFD-KV  367 (475)
T ss_dssp             EEEEEHHHHHHHHHHHHHHHHTSCBSCGGGTCSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCCEETTEECCEEEE-SC
T ss_pred             EEEEehhHHHHHHHHHHHHHHhccCCCccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEeCCccCCceeCCEEEe-CC
Confidence            35777777777766665444433          58999999999998888876321           3456778887 67


Q ss_pred             ChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         383 DKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       383 ~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       368 ~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~v~t~d~~~~~~~~~~l~~G~v~  430 (475)
T 1euh_A          368 TTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVH  430 (475)
T ss_dssp             CTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEE
T ss_pred             CCcCHHHcCccccceEEEEecCCHHHHHHHHhCCCCCeeEEEEeCCHHHHHHHHHhCCEeeEE
Confidence            777899999999975   678999999999999999999999999999999999999999985

>3ju8_A Succinylglutamic semialdehyde dehydrogenase; alpha-beta structure, structural genomics, PSI-2, protein ST initiative; HET: NAD; 1.82A {Pseudomonas aeruginosa}

Probab=98.93  E-value=5.1e-10  Score=114.70  Aligned_cols=94  Identities=23%  Similarity=0.290  Sum_probs=79.4

Q ss_pred             cCCcccccccCCHHHHHHHHhc--------------CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHh
Q psy5844         347 FGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIER  409 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~  409 (442)
                      +||++.-..++.+.+.++.+..              .++.+.++|++  .+..+.+++++.||+|   +.+++.+||++.
T Consensus       323 ~Gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~PTvl~--v~~~~~i~~eEiFGPVl~v~~~~~~~eAi~~  400 (490)
T 3ju8_A          323 MGAVISLSAAEHLLKAQEHLIGKGAQPLLAMTQPIDGAALLTPGILD--VSAVAERPDEEFFGPLLQVIRYSDFAAAIRE  400 (490)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCCCSTTSCCCCCEEEE--CTTCSSCCCCCCCSSEEEEEEESSHHHHHHH
T ss_pred             cccccCHHHHHHHHHHHHHHHHCCCEEEECCCccCCCCCEEccEEEE--eCCCCccccccccccEEEEEEeCCHHHHHHH
Confidence            5777877777777777776521              34557788886  5667789999999975   678999999999


Q ss_pred             hccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         410 ANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       410 an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +|+++|||++||||+|..+++++++++++|+||
T Consensus       401 aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~  433 (490)
T 3ju8_A          401 ANATQYGLAAGLLSDSRERFEQFLVESRAGIVN  433 (490)
T ss_dssp             HHCSSCCSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred             HhcCCCCceEEEEcCCHHHHHHHHHhcCcceEE
Confidence            999999999999999999999999999999985

>4e3x_A Delta-1-pyrroline-5-carboxylate dehydrogenase, mitochondrial; amino acid metabolism, proline inhibition, oxidoreductase; HET: 16P PGE; 1.24A {Mus musculus} PDB: 3v9k_A* 3v9l_A* 3v9j_A* 3v9g_A 3v9h_A 3v9i_A

Probab=98.92  E-value=4.3e-10  Score=116.64  Aligned_cols=119  Identities=20%  Similarity=0.380  Sum_probs=94.5

Q ss_pred             CCcccccceeccCcchhHHHHHh------------hcCCcccccccCCHHHHHHHHhc---------------CCCCceE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE------------IFGPVQQLIRFSSIEEVIERANN---------------SDYGLAA  375 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e------------~fgPvl~v~~~~~~~eai~~an~---------------~~~gl~~  375 (442)
                      ...+|+..++++|...+....++            .+||++.-..++.+.+.|+.+..               .++.+.+
T Consensus       352 ~rv~V~~si~d~f~~~l~~~~~~l~vGdp~~d~~~~~Gpli~~~~~~rv~~~i~~a~~~~ga~v~~GG~~~~~~G~fv~P  431 (563)
T 4e3x_A          352 SRLYVPKSLWPQIKGRLLEEHSRIKVGDPAEDFGTFFSAVIDAKAFARIKKWLEHARSSPSLSILAGGQCNESVGYYVEP  431 (563)
T ss_dssp             EEEEEEGGGHHHHHHHHHHHHHTCCBSCTTTCTTCSBCCCSCHHHHHHHHHHHHHHHHCTTEEEEECCCEECSSSCEECC
T ss_pred             cEEEEecchHHHHHHHHHHHHHhccCCCcccCcCCccCCCcCHHHHHHHHHHHHHHhhcCCCEEEeCCccCCCCCcEecC
Confidence            34677888877776665544433            25888998888888888887652               2456678


Q ss_pred             EEecCCCChhhhhccccEeeeE---EeeCC--HHHHHHhh-ccCCccceeEEeccChhHHHHHHcccc--ccccC
Q psy5844         376 AVFTKDLDKTNYVTQGLRAGTL---IRFSS--IEEVIERA-NNSDYGLAAAVFTKDLDKTNYVTQGLR--AGTVW  442 (442)
Q Consensus       376 ~v~s~d~~~~~~~~~~~~~G~V---~vN~~--~~~av~~a-n~~~yGl~~~vft~d~~~~~~~~~~l~--~G~v~  442 (442)
                      +|+. +.+..+.+++++.||+|   +.+++  .+|+++.+ |+++|||+++|||+|..++.+++++++  +|+||
T Consensus       432 Tvl~-~v~~~~~i~~eEiFGPVl~V~~~~d~~~deAi~~ann~s~yGLta~V~t~d~~~~~~~~~~l~~~aG~v~  505 (563)
T 4e3x_A          432 CIIE-SKDPQEPIMKEEIFGPVLTVYVYPDDKYRETLKLVDSTTSYGLTGAVFAQDKAIVQEATRMLRNAAGNFY  505 (563)
T ss_dssp             EEEE-ESCTTCGGGTSCCCSSEEEEEEECGGGHHHHHHHHHHSSSEESEEEEECSCHHHHHHHHHHTTTTCSEEE
T ss_pred             EEEe-cCCCCChhhcCCCcCeEEEEEEECCCCHHHHHHHHHcCCCCCCEEEEEeCCHHHHHHHHHhhhcCeeEEE
Confidence            8887 66677899999999976   44564  69999999 799999999999999999999999975  99885

>4f9i_A Proline dehydrogenase/delta-1-pyrroline-5-carboxy dehydrogenase; proline utilization A, PUTA, flavoenzyme, structural genomic biology; HET: FAD MES; 2.20A {Geobacter sulfurreducens}

Probab=98.91  E-value=6.4e-10  Score=122.09  Aligned_cols=119  Identities=17%  Similarity=0.322  Sum_probs=100.0

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc------------C-CCCceEEEe
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN------------S-DYGLAAAVF  378 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~------------~-~~gl~~~v~  378 (442)
                      +..+|+..|+++|...+....+++           +||++.-..++.+.+.|+.+..            . ++.+.++|+
T Consensus       819 ~rl~V~~~i~d~f~~~L~~~~~~l~vG~p~d~~t~~Gpvi~~~~~~~v~~~i~~a~~~G~~v~gG~~~~~~G~fv~PTvl  898 (1026)
T 4f9i_A          819 SRVIVLDAVYDKFIERLVSMAKATKVGPSEDPANYMGAVADDKAMKSIKEYAEIGKREGHVLYESPVPAGEGYFVPMTII  898 (1026)
T ss_dssp             EEEEEEGGGHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHHSEEEEECCCCSSSSCCCCCEEE
T ss_pred             ceEEecHHHHHHHHHHHHHHHHhcccCCcccccCccccccCHHHHHHHHHHHHHHHhCCeEEecCCcCCCCCceecceee
Confidence            446888888888777665555543           6899999999988888887631            1 566788999


Q ss_pred             cCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         379 TKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       379 s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      . |.+..+.+++++.||+|   +..++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       899 ~-~v~~~~~i~~eEiFGPVl~V~~~~d~deAI~~aN~t~yGLt~~V~t~d~~~a~~~~~~l~aG~v~  964 (1026)
T 4f9i_A          899 G-GIKPEHRIAQEEIFGPVLAVMRAKDFDQAIEWANSTQFALTGGIFSRSPEHLAKARREFRVGNLY  964 (1026)
T ss_dssp             E-SCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHTCSSCCSEEEEECCCHHHHHHHHHHSCCSEEE
T ss_pred             e-cCCCCccccCceecCcEEEEEEeCCHHHHHHHHHcCCCCCeEEEECCCHHHHHHHHHhCCEeeEE
Confidence            8 67778899999999975   678999999999999999999999999999999999999999985

>2y53_A Aldehyde dehydrogenase (BOX pathway); oxidoreductase, NADP, nucleotide-binding; HET: NAP; 1.40A {Burkholderia xenovorans LB400} PDB: 2y52_A 2y51_A 2vro_A* 2y5d_A*

Probab=98.90  E-value=6.2e-10  Score=115.25  Aligned_cols=119  Identities=15%  Similarity=0.211  Sum_probs=94.7

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHh-------------------cCCCC
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERAN-------------------NSDYG  372 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an-------------------~~~~g  372 (442)
                      +..+|+..++++|...+....+++           +||+++-..++.+++.|+.+.                   ..++.
T Consensus       303 ~rvlV~~~i~d~f~~~l~~~~~~~~vG~p~~~~~~~Gpli~~~~~~rv~~~i~~a~~ga~~~~GG~~~~~~~~~~~~g~~  382 (534)
T 2y53_A          303 RRAFVPEAALEPVLEALKAKLAKITVGNPRNDAVRMGSLVSREQYENVLAGIAALREEAVLAYDSSAVPLIDADANIAAC  382 (534)
T ss_dssp             EEEEEEGGGHHHHHHHHHHHHTTCCBBCTTSTTCSBCCCSCHHHHHHHHHHHHHHHTSSEEEEECTTSCCBSCCTTTSCC
T ss_pred             CEEEEeccHHHHHHHHHHHHHHhccCCCCCcCCCCccCCCCHHHHHHHHHHHHHHHcCCEEEECCcccccccccCCCCce
Confidence            446888888888877665544432           589999999999888888651                   01445


Q ss_pred             ceEEEecCCCChh--hhhccccEeeeE---EeeC---CH-----HHHHHhhccCCccceeEEeccChhHHHHHHccc--c
Q psy5844         373 LAAAVFTKDLDKT--NYVTQGLRAGTL---IRFS---SI-----EEVIERANNSDYGLAAAVFTKDLDKTNYVTQGL--R  437 (442)
Q Consensus       373 l~~~v~s~d~~~~--~~~~~~~~~G~V---~vN~---~~-----~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l--~  437 (442)
                      +.++|++ |.+..  +.+++++.||+|   +.++   +.     +|+++.+|+++|||++||||+|..++.+++++|  +
T Consensus       383 ~~PTvl~-~v~~~~~~~i~~eEiFGPVl~v~~~~~~~~~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~~  461 (534)
T 2y53_A          383 VAPHLFV-VNDPDNATLLHDVEVFGPVASVAPYRVTTDTNALPEAHAVALARRGQGSLVASIYSNDDAHLGRLALELADS  461 (534)
T ss_dssp             CCCEEEE-CSCGGGCSSTTTCCCSSSEEEEEEECCCCC---CTTHHHHHHHHTTSSEEEEEEECSCHHHHHHHHHHHTTT
T ss_pred             ecCEEEE-ecCccccCHHHhCCCcCCEEEEEEECCCCCcccCCHHHHHHHHhCCCCCceEEEECCCHHHHHHHHHHHHhh
Confidence            6788887 44433  589999999975   6688   88     999999999999999999999999999999999  8


Q ss_pred             ccccC
Q psy5844         438 AGTVW  442 (442)
Q Consensus       438 ~G~v~  442 (442)
                      +|+||
T Consensus       462 aG~V~  466 (534)
T 2y53_A          462 HGRVH  466 (534)
T ss_dssp             EEEEE
T ss_pred             CCEEE
Confidence            99885

>1t90_A MMSDH, probable methylmalonate-semialdehyde dehydrogenase; oxidoreductase, NAD; HET: NAD; 2.50A {Bacillus subtilis}

Probab=98.89  E-value=5e-10  Score=114.60  Aligned_cols=95  Identities=22%  Similarity=0.352  Sum_probs=80.9

Q ss_pred             cCCcccccccCCHHHHHHHHh---------------cCCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERAN---------------NSDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIE  408 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an---------------~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~  408 (442)
                      +||++.-..++.+++.++.+.               ..++.+.++|++ +.+..+.+++++.||+|   +.+++.+|+++
T Consensus       322 ~gpli~~~~~~~v~~~i~~a~~~Ga~~~~gg~~~~~~~g~~~~Ptvl~-~v~~~~~~~~eEiFGPvl~v~~~~~~~eai~  400 (486)
T 1t90_A          322 LGPVIREDNKKRTLSYIEKGLEEGARLVCDGRENVSDDGYFVGPTIFD-NVTTEMTIWKDEIFAPVLSVIRVKNLKEAIE  400 (486)
T ss_dssp             BCCCSCHHHHHHHHHHHHHHHHHTCEEEECSSSSCCSSSSCCCCEEEE-SCCTTSHHHHSCCCSSEEEEEEESSHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHHhCCCEEEeCCccCCCCCCCEECCEEEe-CCCCCCHhhcCcccCceEEEEEeCCHHHHHH
Confidence            678888888888877777542               124557889987 66677899999999975   67899999999


Q ss_pred             hhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         409 RANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       409 ~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+|+++|||++||||+|..++.++++++++|+||
T Consensus       401 ~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~v~  434 (486)
T 1t90_A          401 IANKSEFANGACLFTSNSNAIRYFRENIDAGMLG  434 (486)
T ss_dssp             HHHHSSEESEEEEECCBHHHHHHHHHHCCCSEEE
T ss_pred             HHhCCCCCeEEEEEcCCHHHHHHHHHhCCcCeEE
Confidence            9999999999999999999999999999999985

>1ez0_A ALDH, aldehyde dehydrogenase; nucleotide binding domain, NADP+, oxidoreductase; HET: NAP; 2.10A {Vibrio harveyi} SCOP: c.82.1.1 PDB: 1eyy_A*

Probab=98.72  E-value=4.8e-09  Score=107.98  Aligned_cols=123  Identities=9%  Similarity=0.022  Sum_probs=94.4

Q ss_pred             ccCCCCcccccc-eeccCcchhHHHHHhh-cCCcccccccCCHHHHHHHHhc-----------CCCCceEEEecCCCChh
Q psy5844         319 RAGDKGFYVQPT-VFANVRDDMKIAREEI-FGPVQQLIRFSSIEEVIERANN-----------SDYGLAAAVFTKDLDKT  385 (442)
Q Consensus       319 ~~~~~g~~v~pt-i~~~~~~~~~~~~~e~-fgPvl~v~~~~~~~eai~~an~-----------~~~gl~~~v~s~d~~~~  385 (442)
                      |...+..+|+.. ++++|.+.+....+++ .||++.-...+...+.++.+..           .++.+.++|++ +....
T Consensus       289 C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~gp~~~~~~~~~~~~~v~~~~~~~Ga~~~~gg~~g~~~~Ptvl~-~~~~~  367 (510)
T 1ez0_A          289 CTKPGVVFALNTPETQAFIETAQSLIRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASALFV-TSSEN  367 (510)
T ss_dssp             TTCCCEEEEESSHHHHHHHHHHHHHHHHCCCBCCSSHHHHHHHHHHHHHHHTSTTEEEEECCCCTTSBCCEEEE-EEHHH
T ss_pred             cCCCCEEEEeCCccHHHHHHHHHHHHHhcCCCCCCCHHHHHHHHHHHHHHHhcCCCEEEecCCCCCEecCEEEE-ecCCc
Confidence            333455788998 9888887776555554 4787776666666655554431           14556788887 44344


Q ss_pred             ---hhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccCh--hHHHHHHccc--cccccC
Q psy5844         386 ---NYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDL--DKTNYVTQGL--RAGTVW  442 (442)
Q Consensus       386 ---~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~--~~~~~~~~~l--~~G~v~  442 (442)
                         +.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|.  .++.+++++|  ++|+||
T Consensus       368 ~~~~~i~~eEiFGPVl~v~~~~~~deai~~aN~~~~gLaa~v~t~d~~~~~a~~~~~~l~~~aG~V~  434 (510)
T 1ez0_A          368 WRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLV  434 (510)
T ss_dssp             HHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEE
T ss_pred             cccCHHHcCCccCCeEEEEEeCCHHHHHHHHhcCCCCeEEEEEccCcCHHHHHHHHHHHhhcccEEE
Confidence               789999999975   67899999999999999999999999997  7999999999  799885

>3haz_A Proline dehydrogenase; proline utilization A, PUTA, flavoenzyme, 1-pyrroline-5-carboxylate dehydrogenase, oxidoreductase; HET: FAD NAD; 2.10A {Bradyrhizobium japonicum usda 110}

Probab=98.71  E-value=6e-09  Score=114.21  Aligned_cols=117  Identities=19%  Similarity=0.313  Sum_probs=92.8

Q ss_pred             CCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHh-----------cCCCCceEEEecC
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERAN-----------NSDYGLAAAVFTK  380 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an-----------~~~~gl~~~v~s~  380 (442)
                      +..+|+..|+++|...+....+++           +||++....++.+.+.++.+.           ..++.+.++|++.
T Consensus       798 ~rllV~e~i~d~f~~~L~~~~~~l~vGdp~d~~t~~Gpli~~~~~~rv~~~i~~a~~~g~v~gg~~~~~G~fv~PTvl~~  877 (1001)
T 3haz_A          798 RLLFVQEDVADRMIEMVAGAARELKIGDPSDVATHVGPVIDVEAKQRLDAHIARMKTEARLHFAGPAPEGCFVAPHIFEL  877 (1001)
T ss_dssp             EEEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHHSEEEEECCCCSSSCCCCEEEEC
T ss_pred             ceeeccHHHHHHHHHHHHHHHHhcCCCCcccccCccCCCCCHHHHHHHHHHHHHHHhcCeEeccccCCCCcEEeeEEecC
Confidence            345778888877776665544443           688898888888888887653           2356778899973


Q ss_pred             CCChhhhhccccEeeeE---EeeCC--HHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         381 DLDKTNYVTQGLRAGTL---IRFSS--IEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       381 d~~~~~~~~~~~~~G~V---~vN~~--~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                         ..+.+++++.||+|   +.+++  .+|+|+.+|+++|||++||||+|..++.++++++++|+||
T Consensus       878 ---~~~~~~~eEiFGPVL~V~~~~~~~ldeAI~~aN~t~yGLta~V~T~d~~~a~~~a~~l~aG~V~  941 (1001)
T 3haz_A          878 ---TEAGQLTEEVFGPILHVVRYRPENLERVLRAIERTGYGLTLGVHSRIDDSIEAIIDRVQVGNIY  941 (1001)
T ss_dssp             ---SSGGGCCSCCCSSEEEEEEECGGGHHHHHHHHHHTCCCSEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred             ---CCHHHHhccccCcEEEEEEeCCCCHHHHHHHHHcCCCCceEEEEcCCHHHHHHHHHhCCeeeEE
Confidence               24567899999986   33554  6999999999999999999999999999999999999985

>3v4c_A Aldehyde dehydrogenase (NADP+); structural genomics, PSI-biology, nysgrc, NEW YORK structura genomics research consortium; HET: PE4; 1.91A {Sinorhizobium meliloti}

Probab=98.59  E-value=6.3e-09  Score=107.55  Aligned_cols=123  Identities=16%  Similarity=0.072  Sum_probs=87.6

Q ss_pred             ccCCCCcccccc-eeccCcchhHHHHHhh-----cCCcccccccCCHHHHHHHH--------hcCCCCceEEEecCCCCh
Q psy5844         319 RAGDKGFYVQPT-VFANVRDDMKIAREEI-----FGPVQQLIRFSSIEEVIERA--------NNSDYGLAAAVFTKDLDK  384 (442)
Q Consensus       319 ~~~~~g~~v~pt-i~~~~~~~~~~~~~e~-----fgPvl~v~~~~~~~eai~~a--------n~~~~gl~~~v~s~d~~~  384 (442)
                      |...+..+|+.. ++++|...+....+++     +||++.-...+.+++.++.-        ...++.+.++|++ +...
T Consensus       323 C~a~~rvlV~~~~i~d~f~~~l~~~~~~~~~~~~~gp~~~~~~~~~v~~~~~~~Ga~v~~gG~~~g~~~~PTvl~-~~~~  401 (528)
T 3v4c_A          323 CTNPGIAVVIEGADADRFTTAAVEALAKVAPQTMLTDGIAKAYRDGQARFATRNAVKPLLATESSGRDASPNLFE-TTGA  401 (528)
T ss_dssp             TTCCCEEEEESSHHHHHHHHHHHHHHHTCCCEECSCHHHHHHHHHHHHHHHTCTTCEEEECCCCCTTEECCEEEE-EEHH
T ss_pred             cccCcEEEEecccHHHHHHHHHHHHHHhcccCCCCCHHHHHHHHHHHHHHHHhCCCEEEeCCCcCCceeccEEEE-ecCc
Confidence            333345688876 8887777665554443     46665433333333333200        0124456788887 4444


Q ss_pred             h---hhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEecc--ChhHHHHHHcccc--ccccC
Q psy5844         385 T---NYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTK--DLDKTNYVTQGLR--AGTVW  442 (442)
Q Consensus       385 ~---~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~--d~~~~~~~~~~l~--~G~v~  442 (442)
                      .   +.+++++.||+|   +.+++.+||++.+|+++|||++||||+  |..++.+++++|+  +|+||
T Consensus       402 ~~~~~~i~~eEiFGPVl~V~~~~~~deAi~~aN~~~~GL~a~v~t~d~d~~~a~~~a~~l~~~aG~V~  469 (528)
T 3v4c_A          402 QFLADHALGEEVFGPLGLVVRVGSPAEMEELARGFQGQLTATIHMDAGDLETARRLRPVLERKAGRVL  469 (528)
T ss_dssp             HHHHCGGGGCCCSSSEEEEEEESSHHHHHHHHHHCCCEEEEEEECCGGGHHHHHHHHHHHHHHEEEEE
T ss_pred             ccccChhhcccccCCeEEEEecCCHHHHHHHHhcCCCCceEEEEcCCCCHHHHHHHHHHHhhcCcEEE
Confidence            3   789999999975   678999999999999999999999999  8999999999997  99985

>1vlu_A Gamma-glutamyl phosphate reductase; YOR323C, structural GENO JCSG, protein structure initiative, PSI, joint center for S genomics; 2.29A {Saccharomyces cerevisiae} SCOP: c.82.1.1

Probab=98.49  E-value=7e-08  Score=98.07  Aligned_cols=124  Identities=10%  Similarity=0.047  Sum_probs=72.7

Q ss_pred             CCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhc----CCcccccccCC-HHHHHHHHhcCCCCceEEEecCCCCh
Q psy5844         310 GAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF----GPVQQLIRFSS-IEEVIERANNSDYGLAAAVFTKDLDK  384 (442)
Q Consensus       310 Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~f----gPvl~v~~~~~-~~eai~~an~~~~gl~~~v~s~d~~~  384 (442)
                      |.....| .|...+..+|+..+ ++|...+....+++.    |+-..   .+- ++++++.+-. +.|+.++++   .+.
T Consensus       262 ~~~~n~G-~C~a~~rvlV~~~i-d~f~~~l~~~~~~~~v~~~Gdp~~---~~~~i~~a~~~~~g-G~g~~Ptvl---v~~  332 (468)
T 1vlu_A          262 AKTNYPA-GCNAMETLLINPKF-SKWWEVLENLTLEGGVTIHATKDL---KTAYFDKLNELGKL-TEAIQCKTV---DAD  332 (468)
T ss_dssp             TTCC-----CCCCEEEEECTTS-TTHHHHHHHHHHHHCCCBEECHHH---HHHHHHHHHHHTCC-CHHHHTTBC------
T ss_pred             HhcCCCC-cCCcCcEEEEECCH-HHHHHHHHHHHHhcCCeecCCHHH---hcccccccceeecc-CCCCCCcee---eCC
Confidence            3334444 55444557889988 888777665555554    33211   000 2223221111 101334454   234


Q ss_pred             hhhhccccEeee---EEeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         385 TNYVTQGLRAGT---LIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       385 ~~~~~~~~~~G~---V~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .+.+++++.||+   |+.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       333 ~~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~aG~V~  393 (468)
T 1vlu_A          333 EEQDFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVY  393 (468)
T ss_dssp             ----------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred             CchhhhcCccCceEEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCeeEEE
Confidence            567999999996   4778999999999999999999999999999999999999999985

>4ghk_A Gamma-glutamyl phosphate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.25A {Burkholderia thailandensis}

Probab=98.44  E-value=8.1e-08  Score=97.09  Aligned_cols=112  Identities=17%  Similarity=0.095  Sum_probs=75.8

Q ss_pred             cccCCCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeE
Q psy5844         318 GRAGDKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL  397 (442)
Q Consensus       318 ~~~~~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V  397 (442)
                      .|...+..+|+..++++|...+....+++..   ....-....+.++.+.   .|    ++.   +..+.+++++.||+|
T Consensus       278 ~C~a~~rvlV~~~i~d~f~~~l~~~~~~~~~---~~~g~p~~~~~i~~a~---~G----~~~---~~~~~~~~eEiFGPV  344 (444)
T 4ghk_A          278 TCNTMETLLVARGIAPAVLSPLGRLYREKGV---ELRVDADARAVLEAAG---VG----PLV---DATDEDWRTEYLAPV  344 (444)
T ss_dssp             -CCCCCEEEEEGGGHHHHHHHHHHHHHHTTC---EEEECHHHHHHHHHTT---CC----CCE---ECCSGGGTCC---CE
T ss_pred             ccCcCceEEEeHHHHHHHHHHHHHHHHHcCC---eecCCHHHHHHHHhcc---cC----ccc---CCCchhhhccccCce
Confidence            4444456789999998887766655554421   0000011233443332   22    232   223678999999975


Q ss_pred             ---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         398 ---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       398 ---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                         +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       345 l~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~a~~l~aG~V~  392 (444)
T 4ghk_A          345 LAIKIVDGIDAAIEHINEYGSHHTDAIVTEDHDRAMRFLREVDSASVM  392 (444)
T ss_dssp             EEEEEESSHHHHHHHHHHHSCSSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred             EEEEEeCCHHHHHHHHHhCCCCceEEEEeCCHHHHHHHHHhCCcceEE
Confidence               668999999999999999999999999999999999999999985

>3k9d_A LMO1179 protein, aldehyde dehydrogenase; structural genomics, PSI-2, protein initiative; 2.00A {Listeria monocytogenes}

Probab=98.35  E-value=7.9e-08  Score=97.73  Aligned_cols=94  Identities=7%  Similarity=0.018  Sum_probs=66.3

Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHH----HhhccCCcccee
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVI----ERANNSDYGLAA  419 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av----~~an~~~yGl~~  419 (442)
                      +||++.-..++.+.+.++.....+..+..+- ..+....+.+. ++.||+|   +..++.+||+    +.+|+++|||++
T Consensus       298 ~gp~i~~~~~~~i~~~~~~a~~~ga~vl~gg-~~~v~~~~~~~-~E~fgPVl~v~~~~~~~eAi~~ai~~~n~~~~gl~a  375 (464)
T 3k9d_A          298 MNPAIVGKSVQHIANLAGLTVPADARVLIAE-ETKVGAKIPYS-REKLAPILAFYTAETWQEACELSMDILYHEGAGHTL  375 (464)
T ss_dssp             BCGGGTTCCHHHHHHHTTCCCCTTCCEEEEE-CCCCSTTCGGG-SCCCSSEEEEEEESSHHHHHHHHHHHHHHTTTEEEE
T ss_pred             cCcccCHHHHHHHHHHhhhhhcCCCEEEEcC-CCCCCCCCccc-ccccCceEEEEEeCCHHHHHHHHHHHHhcCCCCCeE
Confidence            5777766655555555443322222222111 11344445555 6789965   6789999997    789999999999


Q ss_pred             EEeccChhHHHHHHccccccccC
Q psy5844         420 AVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       420 ~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ||||+|..++.++++++++|+||
T Consensus       376 ~i~t~d~~~a~~~~~~l~~G~v~  398 (464)
T 3k9d_A          376 IIHSEDKEIIREFALKKPVSRLL  398 (464)
T ss_dssp             EEECSCHHHHHHHHHHSSEEEEE
T ss_pred             EEEeCCHHHHHHHHHhCCEeEEE
Confidence            99999999999999999999985

>3my7_A Alcohol dehydrogenase/acetaldehyde dehydrogenase; ACDH, PSI, MCSG, structural genomics, midwest center for STR genomics; 2.30A {Vibrio parahaemolyticus}

Probab=98.18  E-value=1.2e-07  Score=96.11  Aligned_cols=114  Identities=10%  Similarity=0.161  Sum_probs=80.5

Q ss_pred             CCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHH----------------hcCCCCceEEE-------ec
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERA----------------NNSDYGLAAAV-------FT  379 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~a----------------n~~~~gl~~~v-------~s  379 (442)
                      ...+|+..++++|...+.    +..||+++-..++.+++.++..                ...++...+++       ++
T Consensus       250 ~rv~V~~~i~d~f~~~l~----~~~gpli~~~~~~~v~~~i~~~~~~~a~v~G~~~~~~~~~~G~~v~pt~~vl~~~~~~  325 (452)
T 3my7_A          250 QAVIVVDEVYDEVKERFA----SHKAHVLSKTDADKVRKVLLIDGALNAKIVGQPATAIAEMAGVKVPADTKVLIGEGLG  325 (452)
T ss_dssp             EEEEEEGGGHHHHHHHHH----TTTEEECCHHHHHHHHHHHEETTEECGGGTTCCHHHHHHHHTCCCCTTCCEEEEECSS
T ss_pred             cEEEEcHHHHHHHHHHHH----HhCCCcCCHHHHHHHHHHHHhhcccCCeEecCccchhHHhCCceeCCCeeEEeecccc
Confidence            446777777776654432    3357777766666665555321                11233444443       33


Q ss_pred             CCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCC----ccceeEEeccChhHHHH---HHccccccccC
Q psy5844         380 KDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSD----YGLAAAVFTKDLDKTNY---VTQGLRAGTVW  442 (442)
Q Consensus       380 ~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~----yGl~~~vft~d~~~~~~---~~~~l~~G~v~  442 (442)
                       +.+..+.+.+ +.||+|   +..++.+|+++.+|++.    |||+++|||+|..++.+   +++++++|+|+
T Consensus       326 -~v~~~~~~~~-E~FgPVl~v~~~~~~~eAi~~an~~~~~~g~Glta~i~t~d~~~a~~i~~~a~~l~~G~V~  396 (452)
T 3my7_A          326 -KVSYDDAFAH-EKLSPTLGMFRADNFEDAVAQAVTMVEIGGIGHTSGLYTNQDVNADRIRYFGDKMKTARIL  396 (452)
T ss_dssp             -SCCTTCGGGS-CCSSSEEEEEEESSHHHHHHHHHHHHHHHSSCCEEEEESCTTTCHHHHHHHHHHCCCSEEE
T ss_pred             -CCCCcchhhc-CccCcEEEEEEeCCHHHHHHHHHhcccccCCCCEEEEEcCCHHHHHHHHHHHHhCCEEEEE
Confidence             5555666776 679975   67899999999999985    99999999999998888   99999999985

>1o20_A Gamma-glutamyl phosphate reductase; TM0293, structural genom JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: c.82.1.1

Probab=98.18  E-value=6.8e-07  Score=89.82  Aligned_cols=57  Identities=12%  Similarity=0.177  Sum_probs=53.2

Q ss_pred             hhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         386 NYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       386 ~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       316 ~~i~~eEiFGPVl~v~~~~~~deAi~~aN~~~~gL~a~v~t~d~~~a~~~~~~l~~G~V~  375 (427)
T 1o20_A          316 EDDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVY  375 (427)
T ss_dssp             GGGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred             cchhhcccccceEEEEEECCHHHHHHHHHhCCCCCeEEEEeCCHHHHHHHHHhCCccEEE
Confidence            568999999975   678999999999999999999999999999999999999999985

>2h5g_A Delta 1-pyrroline-5-carboxylate synthetase; dehydrogenase, structural genomics, structural genomics CONS SGC, oxidoreductase; 2.25A {Homo sapiens}

Probab=98.01  E-value=2e-06  Score=87.17  Aligned_cols=59  Identities=8%  Similarity=0.122  Sum_probs=52.5

Q ss_pred             hhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         384 KTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       384 ~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ..+.+++++.||+|   +.+++.+||++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       327 ~~~~i~~eE~FgPvl~v~~~~~~deAi~~aN~~~~gLaa~v~t~d~~~a~~~~~~l~aG~V~  388 (463)
T 2h5g_A          327 SEVKSLRTEYGDLELCIEVVDNVQDAIDHIHKYGSSHTDVIVTEDENTAEFFLQHVDSACVF  388 (463)
T ss_dssp             ---CCSSCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred             CCchHHhccccCceEEEEEeCCHHHHHHHHHcCCCCceEEEEeCCHHHHHHHHHhCCeeEEE
Confidence            45778999999974   668999999999999999999999999999999999999999985

>1kae_A HDH, histidinol dehydrogenase; L-histidinol dehydrogenase, homodimer, rossman fold, 4 domai L-histidine biosynthesis, NAD cofactor; HET: HSO NAD; 1.70A {Escherichia coli} SCOP: c.82.1.2 PDB: 1k75_A* 1kah_A* 1kar_A

Probab=92.61  E-value=8.2  Score=37.71  Aligned_cols=233  Identities=16%  Similarity=0.130  Sum_probs=131.4

Q ss_pred             CCcceEEEeeccceEEEecccc---cchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCC
Q psy5844          95 GDFFAYTRHEPVGVCGQIIPWN---FPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY  171 (442)
Q Consensus        95 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~  171 (442)
                      .|.....++.|+--|++..|.-   || ++++...+||-.+|+.=|+-.+|-.  ....+.-+.+.+|+..    +..-.
T Consensus       113 ~Gv~~gq~~~Pi~rvGlYVPGG~a~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~--i~p~iL~AA~l~Gv~e----Iy~vG  185 (434)
T 1kae_A          113 PGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPP--IADEILYAAQLCGVQD----VFNVG  185 (434)
T ss_dssp             TTEEEEEEEEECSEEEEECCCSSSCCT-HHHHHHHHHHHHHTCSEEEEEECSS--CCHHHHHHHHHTTCCE----EEECC
T ss_pred             CCcEEEEEEeehheEEEEecCCCCCch-hHHHHhhccHhhcCCCeEEEECCCC--CCHHHHHHHHHcCCCE----Eeecc
Confidence            4666778899999999999983   55 5666778899999998765444321  1122233445666663    22222


Q ss_pred             c-cchhhhh----cCCCccEEeecCCHHHHHHHHhh---ccCCCCceeeeecCCCCceEE--eCCCCHHHHHHHHHHHhh
Q psy5844         172 G-DAGAALV----QHPGVDKVAFTGSTEVGKLVQQG---SGASNLKRTTLELGGKSPNII--FADADLDAAVEGAHFGLF  241 (442)
Q Consensus       172 ~-~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~---~~~~~~~~~~~e~gG~~~~iV--~~dad~~~a~~~i~~~~~  241 (442)
                      | +...+|.    .-|.||.|+=.|..-+..+=+..   .+   ..-+=+. .|.+=++|  +++||.+.++..++.-+=
T Consensus       186 GAQAIAAlAyGTetIp~VDkI~GPGN~yVa~AKr~Vs~~~G---~VgIDm~-AGPSEilViAD~tAnp~~vAaDLLsQAE  261 (434)
T 1kae_A          186 GAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLD---GAAIDMP-AGPSEVLVIADSGATPDFVASDLLSQAE  261 (434)
T ss_dssp             HHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHHHCTT---SCEESCC-CCCCEEEEEECTTSCHHHHHHHHHHHHT
T ss_pred             cHHHHHHHHcCCCCCCCccEEECCCcHHHHHHHHHhHhhcC---ccccCCC-CCCceEEEEeCCCCCHHHHHHHHHHHhc
Confidence            3 3333333    35789999999988654432222   11   0111111 23333333  456899988888776553


Q ss_pred             ccCCCcccCCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccC
Q psy5844         242 FNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAG  321 (442)
Q Consensus       242 ~~~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~  321 (442)
                      +..     ..+-|+|..+  ++|.+++.+.+.+.                           +    .             
T Consensus       262 Hd~-----~a~aiLvT~s--~~la~~V~~ev~~q---------------------------l----~-------------  290 (434)
T 1kae_A          262 HGP-----DSQVILLTPA--ADMARRVAEAVERQ---------------------------L----A-------------  290 (434)
T ss_dssp             TCT-----TCEEEEEESC--HHHHHHHHHHHHHH---------------------------H----T-------------
T ss_pred             cCC-----CCcEEEEECC--HHHHHHHHHHHHHH---------------------------H----H-------------
Confidence            332     2345666655  45555554444321                           0    0             


Q ss_pred             CCCcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccE-eeeEEee
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLR-AGTLIRF  400 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~-~G~V~vN  400 (442)
                                  ..+. ..+ .+.-+..- .+..+++++|+++++|..-.-+ ..+.++|+   +.++.+++ +|.|++.
T Consensus       291 ------------~lpr-~~i-a~~sl~~~-~ii~v~~l~ea~~~~N~~APEH-Lel~~~dp---~~~l~~I~nAGaIFlG  351 (434)
T 1kae_A          291 ------------ELPR-AET-ARQALNAS-RLIVTKDLAQCVEISNQYGPEH-LIIQTRNA---RELVDSITSAGSVFLG  351 (434)
T ss_dssp             ------------TCTT-HHH-HHHHHTTC-EEEECSSHHHHHHHHHHHCCSE-EEEESTTH---HHHGGGCCSCSEEEES
T ss_pred             ------------hCCh-HHH-HHHHHHcC-eEEEECCHHHHHHHHHHhhhHh-hhhhhcCH---HHHHhhcCcccchhcC
Confidence                        0000 001 11122223 4556789999999999844333 25777664   45556665 8999998


Q ss_pred             CCHHHHHH
Q psy5844         401 SSIEEVIE  408 (442)
Q Consensus       401 ~~~~~av~  408 (442)
                      ....+++.
T Consensus       352 ~~tpe~~G  359 (434)
T 1kae_A          352 DWSPESAG  359 (434)
T ss_dssp             TTCCHHHH
T ss_pred             CCCchhhc
Confidence            77666654

>4gic_A HDH, histidinol dehydrogenase; protein structure initiative, STR genomics, PSI-biology, NEW YORK structural genomics researc consortium; 2.05A {Methylococcus capsulatus}

Probab=92.08  E-value=8.5  Score=37.51  Aligned_cols=164  Identities=18%  Similarity=0.144  Sum_probs=96.6

Q ss_pred             CCcceEEEeeccceEEEecccc---cchHHHHhhhhhhhccCCeEE-e-cCCCCChHHHHHHHHHHHHhCCCCCcEEeec
Q psy5844          95 GDFFAYTRHEPVGVCGQIIPWN---FPLLMLAWKIAPALATGNTIV-L-KPAEQTPLTALAVGALIAEAGIPEGVVNIVP  169 (442)
Q Consensus        95 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aL~~Gn~vv-~-kps~~~~~~~~~l~~~l~~aglp~~~~~~v~  169 (442)
                      .|.....++.|+--|++..|..   || ++++...+||-.+|+.=| + -|.+.. .....+.-+.+.+|+.+    +..
T Consensus       119 ~G~~~g~~~~Pi~~VGlYVPGG~A~yp-SsvLM~aiPAkVAGV~~Iv~~tPp~~G-~i~p~iL~AA~l~Gv~e----Iy~  192 (423)
T 4gic_A          119 DGTLLGQKITPLDRVGLYVPGGKAAYP-SSVLMNAVPAKVAGVPELIMAVPAPRG-ELNALVLAAAYISGVDR----VFR  192 (423)
T ss_dssp             TSCEEEEEEEECSEEEEECCCSTTCCH-HHHHHHHHHHHHHTCSEEEEECCCGGG-CCCHHHHHHHHHHTCCE----EEC
T ss_pred             CCCEEEEEEEEecceeEEeeCCCCchh-hHHHHhhccHHHhCCCeEEEecCCCCC-CccHHHHHHHHhcCCcE----EEE
Confidence            5666778899999999999965   55 456667889999999743 3 333221 12223333445567653    333


Q ss_pred             CCc-cchhhhh----cCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEE-eCCCCHHHHHHHHHHHhhcc
Q psy5844         170 GYG-DAGAALV----QHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNII-FADADLDAAVEGAHFGLFFN  243 (442)
Q Consensus       170 ~~~-~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV-~~dad~~~a~~~i~~~~~~~  243 (442)
                      -.| +...+|.    .-|.||.|+=.|..-+..+=+...+   ..-+=+..|-.--+|+ ++++|.+.++..++.-+=+.
T Consensus       193 vGGAQAIAAlAyGTetI~~VDkIvGPGN~yVa~AKr~v~g---~VgIDm~AGPSEilViAD~~a~p~~vAaDLlsQAEHd  269 (423)
T 4gic_A          193 IGGAQAVAALAYGTETVPRVDKIVGPGNIYVATAKKLVFG---QVGIDMVAGPSEILVISDGRTDPDWIAMDLFSQAEHD  269 (423)
T ss_dssp             CCHHHHHHHHHHCCSSSCCCSEEECCCCHHHHHHHHHHBT---TBEECCCCCCCEEEEEECSCSCHHHHHHHHHHHHTTC
T ss_pred             cCChhhhhhhccCCCcccceeEEecCCcHHHHHHHHHhcC---CcCcccccccceEEEEeCCCCCHHHHHHHHHHhhccC
Confidence            334 4444443    3578999999999877654333322   1122222233333333 44689999888887665443


Q ss_pred             CCCcccCCCEEEEcCccHHHHHHHHHHHHhh
Q psy5844         244 MGQCCCAGSRTFVQDTIYDEFVARSGERAKR  274 (442)
Q Consensus       244 ~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~  274 (442)
                      ..     .+-++|..+  ++|.+++.+.+.+
T Consensus       270 ~~-----a~~iLvT~s--~~la~~V~~~i~~  293 (423)
T 4gic_A          270 ED-----AQAILISPD--AAHLEAVQASIER  293 (423)
T ss_dssp             TT-----CEEEEEESC--HHHHHHHHHHHHH
T ss_pred             CC-----CeEEEEeCc--HHHHHHHHHHHHH
Confidence            32     345777666  4555555555543

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	442
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-132
d1o04a_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	3e-05
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-130
d1bxsa_	494	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	4e-05
d1a4sa_	503	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	1e-111
d1wnda_	474	c.82.1.1 (A:) Putative betaine aldehyde dehydrogen	7e-89
d1uzba_	516	c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogen	6e-74
d1euha_	474	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-69
d1ad3a_	446	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	7e-66
d1ky8a_	499	c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3	1e-55
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	3e-27
d1o20a_	414	c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {	1e-09
d1ez0a_	504	c.82.1.1 (A:) Aldehyde reductase (dehydrogenase),	2e-19

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score =  388 bits (998), Expect = e-132
 Identities = 244/346 (70%), Positives = 288/346 (83%), Gaps = 1/346 (0%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           LETLDNGKPY +SY VD++  L+ LRYYAG+ADK HGKTIPI+GDFF+YTRHEPVGVCGQ
Sbjct: 99  LETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVCGQ 158

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           IIPWNFPLLM AWK+ PALATGN +V+K AEQTPLTAL V  LI EAG P GVVNIVPG+
Sbjct: 159 IIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGF 218

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G  AGAA+  H  VDKVAFTGSTE+G+++Q  +G+SNLKR TLELGGKSPNII +DAD+D
Sbjct: 219 GPTAGAAIASHEDVDKVAFTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMD 278

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
            AVE AHF LFFN GQC CAGSRTFVQ+ IYDEFV RS  RAK R VG+PFD   EQGPQ
Sbjct: 279 WAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQ 338

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPV 350
           +D+ Q  KIL +I +GK +GA+L+ GGG A D+G+++QPTVF +V+D M IA+EEIFGPV
Sbjct: 339 VDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFGPV 398

Query: 351 QQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
            Q+++F +IEEV+ RANNS YGLAAAVFTKDLDK NY++Q L+AGT
Sbjct: 399 MQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGT 444

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

 Score = 43.9 bits (103), Expect = 3e-05
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 24 AVPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYN 62
          AVP P  +P++   Q+FINNE+ +A S  +T     P  
Sbjct: 1  AVPAPNQQPEVFCNQIFINNEWHDAVSR-KTFPTVNPST 38

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score =  382 bits (983), Expect = e-130
 Identities = 221/346 (63%), Positives = 283/346 (81%), Gaps = 1/346 (0%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           +E ++ GK ++ +Y +D+   ++TLRY AG+ADKI G+TIP++G+FF YTR EPVGVCGQ
Sbjct: 99  MEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVCGQ 158

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           IIPWNFPLLM  WKI PAL+ GNT+V+KPAEQTPLTAL +G+LI EAG P GVVNIVPGY
Sbjct: 159 IIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGY 218

Query: 172 G-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLD 230
           G  AGAA+  H  VDKVAFTGSTEVGKL+++ +G SNLKR +LELGGKSP I+FADADLD
Sbjct: 219 GPTAGAAISSHMDVDKVAFTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLD 278

Query: 231 AAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQ 290
            AVE AH G+F++ GQCC A SR FV+++IYDEFV RS ERAK+  +G+P    V QGPQ
Sbjct: 279 NAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQ 338

Query: 291 IDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFGPV 350
           IDKEQ +KIL+ IESGK +GA+L  GGG  G+KG+++QPTVF++V DDM+IA+EEIFGPV
Sbjct: 339 IDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFGPV 398

Query: 351 QQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           QQ+++F S+++VI+RANN+ YGL+A +FT D+DK   V+  L++GT
Sbjct: 399 QQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGT 444

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]} Length = 494

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

 Score = 43.5 bits (102), Expect = 4e-05
 Identities = 12/38 (31%), Positives = 22/38 (57%), Gaps = 1/38 (2%)

Query: 25 VPKPITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYN 62
          VP P+T  + ++T++FINNE+ ++ S  +      P  
Sbjct: 2  VPAPLTNLQFKYTKIFINNEWHSSVSG-KKFPVFNPAT 38

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]} Length = 503

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

 Score =  333 bits (856), Expect = e-111
 Identities = 149/351 (42%), Positives = 208/351 (59%), Gaps = 8/351 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVCGQ 111
           LE ++N          D++ + + + YYAG A  + G+ I + G  FAYTR EP+GVC  
Sbjct: 103 LEVINN-GKTITEAEYDIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVCAG 161

Query: 112 IIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGY 171
           I+ WN+P ++ AWK APALA GN +V KP+  TP+T + +  +  EAG+P G+VN+V G 
Sbjct: 162 ILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGG 221

Query: 172 GDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDA 231
            + G+ L  HP V KV+FTGS   GK V +   A  +K  TLELGGKSP +IF D +L+ 
Sbjct: 222 AETGSLLCHHPNVAKVSFTGSVPTGKKVME-MSAKTVKHVTLELGGKSPLLIFKDCELEN 280

Query: 232 AVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQI 291
           AV GA    F   GQ C  G+R FVQ  I  +F+    +R K   VGDP       G  I
Sbjct: 281 AVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLI 340

Query: 292 DKEQMDKILEFIESGKSQGAQLVAGGGRAG------DKGFYVQPTVFANVRDDMKIAREE 345
            K Q+DK+L F+   K +GA+++ GG            G+++ P V  N RDDM   +EE
Sbjct: 341 SKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVKEE 400

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           IFGPV  ++ F + EEV++RANN+ +GLA+ VFT+D+ + + V   L AGT
Sbjct: 401 IFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGT 451

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

 Score =  276 bits (706), Expect = 7e-89
 Identities = 132/348 (37%), Positives = 199/348 (57%), Gaps = 5/348 (1%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP-INGDFFAYTRHEPVGVCG 110
           LE+ + GKP + +++ ++   +   R++AG A  ++G           +  R +P+GV  
Sbjct: 84  LESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGVVA 143

Query: 111 QIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPG 170
            I PWN+PL+M AWK+APALA GN +VLKP+E TPLTAL +  L  +   P GVVNI+ G
Sbjct: 144 SIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKDI-FPAGVVNILFG 202

Query: 171 YG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADL 229
            G   G  L  HP V  V+ TGS   G+ +   + + ++KRT +ELGGK+P I+F DAD+
Sbjct: 203 RGKTVGDPLTGHPKVRMVSLTGSIATGEHIISHTAS-SIKRTHMELGGKAPVIVFDDADI 261

Query: 230 DAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGP 289
           +A VEG     ++N GQ C A  R + Q  IYD  V + G        G P D + E GP
Sbjct: 262 EAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGP 321

Query: 290 QIDKEQMDKILEFIESGKSQGAQLVAGGG-RAGDKGFYVQPTVFANVRDDMKIAREEIFG 348
                 ++++ + +E  K+ G   V  GG +    G+Y  PT+ A    D  I ++E+FG
Sbjct: 322 LSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEVFG 381

Query: 349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
           PV  +  F + E+V+  AN+S YGLA++V+TKD+ + + V+  L+ G 
Sbjct: 382 PVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGC 429

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]} Length = 516

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

 Score =  238 bits (608), Expect = 6e-74
 Identities = 122/354 (34%), Positives = 182/354 (51%), Gaps = 11/354 (3%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI--PINGDFFAYTRHEPVGVC 109
               + GK +  +   DV  ++  + YYA  A +     +           + + P+G  
Sbjct: 119 TLVYEVGKNWVEAS-ADVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLGAG 177

Query: 110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVP 169
             I PWNFP+ +    I   +A GNT++ KPAE   +    V  +  EAG P GVVN +P
Sbjct: 178 VVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLP 237

Query: 170 GYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSG-----ASNLKRTTLELGGKSPNII 223
           G G + GA LV+HP +  + FTGS EVG  + + +G      +  KR  +E GGK+  I+
Sbjct: 238 GVGEEVGAYLVEHPRIRFINFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIV 297

Query: 224 FADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDL 283
              AD D A EG     +   GQ C A SR  +    Y+  + R  +RA+R +VG P + 
Sbjct: 298 DETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAYEPVLERVLKRAERLSVG-PAEE 356

Query: 284 NVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAR 343
           N + GP +  EQ  K+L +IE GK++G  LV GG R   +G+++ PTVF  V    +IA+
Sbjct: 357 NPDLGPVVSAEQERKVLSYIEIGKNEGQ-LVLGGKRLEGEGYFIAPTVFTEVPPKARIAQ 415

Query: 344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           EEIFGPV  +IR     E +E AN++ YGL   V+++  +   +  +    G L
Sbjct: 416 EEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNL 469

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]} Length = 474

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

 Score =  225 bits (574), Expect = 2e-69
 Identities = 115/351 (32%), Positives = 174/351 (49%), Gaps = 13/351 (3%)

Query: 52  LETLDNGKPYNMSYSVDVEYS-----LRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPV 106
           + + +  K Y  + S  V  +                    G     +    A  R EPV
Sbjct: 84  ILSKEVAKGYKSAVSEVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRREPV 143

Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVN 166
           G+   I P+N+P+ +   KIAPAL  GN I  KP  Q  ++ L +    AEAG+P GV N
Sbjct: 144 GLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFN 203

Query: 167 IVPGYG-DAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFA 225
            + G G + G  +V+H  V+ + FTGST +G+ + +    + ++   LELGGK   I+  
Sbjct: 204 TITGRGSEIGDYIVEHQAVNFINFTGSTGIGERIGK---MAGMRPIMLELGGKDSAIVLE 260

Query: 226 DADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNV 285
           DADL+   +    G F   GQ C A  R  V +++ DE V +  E+    T+G+P D + 
Sbjct: 261 DADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVADELVEKIREKVLALTIGNPED-DA 319

Query: 286 EQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE 345
           +  P ID +  D +   I     +GA  +    R   +G  + P +F  V  DM++A EE
Sbjct: 320 DITPLIDTKSADYVEGLINDANDKGATALTEIKR---EGNLICPILFDKVTTDMRLAWEE 376

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
            FGPV  +IR +S+EE IE +N S+YGL A++FT D  +   + + L  GT
Sbjct: 377 PFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGT 427

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 446

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score =  215 bits (549), Expect = 7e-66
 Identities = 94/350 (26%), Positives = 147/350 (42%), Gaps = 14/350 (4%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYA----GFADKIHGKTIPINGDFFAYTRHEPVG 107
               D GK    SY  +V + L  L         +A+               Y   EP+G
Sbjct: 45  ALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEPLG 104

Query: 108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNI 167
           V   I  WN+P  +    +  A+A GN ++LKP+E +   A  +          +  + +
Sbjct: 105 VVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLA--TLIPQYMDQNLYL 162

Query: 168 VPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADA 227
           V   G      +     D + +TGST VGK+V   + A +L   TLELGGKSP  +  D 
Sbjct: 163 VVKGGVPETTELLKERFDHIMYTGSTAVGKIVMA-AAAKHLTPVTLELGGKSPCYVDKDC 221

Query: 228 DLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQ 287
           DLD A     +G F N GQ C A        +I ++ V +  +  K    G+    + + 
Sbjct: 222 DLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIVEKLKKSLKDF-YGEDAKQSRDY 280

Query: 288 GPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIF 347
           G  I+     ++   I++ K      VA GG       Y+ PT+  +V     + +EEIF
Sbjct: 281 GRIINDRHFQRVKGLIDNQK------VAHGGTWDQSSRYIAPTILVDVDPQSPVMQEEIF 334

Query: 348 GPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           GPV  ++   S+EE I+  N  +  LA  VF+ +      +     +G +
Sbjct: 335 GPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGV 384

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]} Length = 499

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

 Score =  190 bits (482), Expect = 1e-55
 Identities = 107/352 (30%), Positives = 165/352 (46%), Gaps = 10/352 (2%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-----PINGDFFAYTRHEPV 106
           +  ++ GKP + +   +V+ ++  LR       KI G  I         +     R EP+
Sbjct: 98  VLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRREPL 156

Query: 107 GVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVN 166
           GV   I P+N+PL     KI  +   GN +V+KP+   PL A      + +AG P   + 
Sbjct: 157 GVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIA 216

Query: 167 IVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFAD 226
           ++   G     +V    V  V+FTGSTEVG+ V +      +K+  +ELGG  P I+  D
Sbjct: 217 LLNLPGKEAEKIVADDRVAAVSFTGSTEVGERVVKVG---GVKQYVMELGGGDPAIVLED 273

Query: 227 ADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVE 286
           ADLD A +    G++   GQ C A      +  +Y + V    +R     VGDP D  V+
Sbjct: 274 ADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVD 333

Query: 287 QGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQP-TVFANVRDDMKIAREE 345
            GP I    +D+++  IE    +G +++AGG R G            A+   DM + + E
Sbjct: 334 VGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYKRE 393

Query: 346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTL 397
           +F PV   +    +++ IE AN   YGL AAVF +D+ K     + L  G +
Sbjct: 394 VFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAI 445

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score =  110 bits (275), Expect = 3e-27
 Identities = 43/358 (12%), Positives = 91/358 (25%), Gaps = 56/358 (15%)

Query: 52  LETLDNGKPYNMSYS-----------VDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAY 100
              +D  K                    ++  ++      G  D +         +    
Sbjct: 46  ANRIDVEKARERGVKESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVREDGLR 105

Query: 101 TRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI 160
                V +    I +     +       AL +GNTI+L+       +  A+ + I EA  
Sbjct: 106 IARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALK 165

Query: 161 PEGVVNIVPGYGDA--GAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGK 218
              +      + +    + +++   + +         G  +       N     LE G  
Sbjct: 166 ETEIPESSVEFIENTDRSLVLEMIRLREYLSLVIPRGGYGLIS-FVRDNATVPVLETGVG 224

Query: 219 SPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVG 278
           + +I   ++                    C A  +  V + I  EF+    E  ++  V 
Sbjct: 225 NCHIFVDESADLKKAVPVIINAKTQRPGTCNAAEKLLVHEKIAKEFLPVIVEELRKHGVE 284

Query: 279 DPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDD 338
                                                      +K   + P V     DD
Sbjct: 285 VRGC---------------------------------------EKTREIVPDVVPATEDD 305

Query: 339 MKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGT 396
                 E    +  +    +++E IE       G + ++ T++          + A  
Sbjct: 306 W---PTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAA 360

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]} Length = 414

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

 Score = 57.4 bits (137), Expect = 1e-09
 Identities = 7/47 (14%), Positives = 18/47 (38%)

Query: 396 TLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW 442
            +    +++E IE       G + ++ T++          + A  V+
Sbjct: 316 AIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVY 362

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]} Length = 504

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

 Score = 88.2 bits (217), Expect = 2e-19
 Identities = 54/370 (14%), Positives = 108/370 (29%), Gaps = 33/370 (8%)

Query: 52  LETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN---------GDFFAYTR 102
              L+   P     + ++  +   LR +A   +        ++                +
Sbjct: 71  RAHLETALPEVRL-TGEIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIRRQ 129

Query: 103 HEPVGVCGQIIPWNFPLL--MLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAG- 159
              +G        NFPL         A ALA G  +++K     P T+  V   I +A  
Sbjct: 130 QIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALK 189

Query: 160 ---IPEGVVNIVPGYGDAGAALVQHPG-VDKVAFTGSTEVGKLVQQGSGASNLKRTTLEL 215
              +P+ +  ++ G   A    +     +  V FTGS   G+ +   +            
Sbjct: 190 QEQLPQAIFTLLQGNQRALGQALVSHPEIKAVGFTGSVGGGRALFNLAHERPEPIPFYGE 249

Query: 216 GGKSPNIIFADADLDAAVE---GAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSGERA 272
            G         + + A  +        +    GQ C      F  +T   +    + +  
Sbjct: 250 LGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCTKPGVVFALNTPETQAFIETAQSL 309

Query: 273 KRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVF 332
            R+           +     +       + I+   SQ                       
Sbjct: 310 IRQQSPSTLLTPGIRDSYQSQVVSRGSDDGIDVTFSQAESPCVASA---------LFVTS 360

Query: 333 ANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFT--KDLDKTNYVTQ 390
           +          EEIFGP   ++   ++ +++  +      L A +    +D  + + +  
Sbjct: 361 SENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIP 420

Query: 391 GLR--AGTLI 398
            L   AG L+
Sbjct: 421 RLEEIAGRLV 430

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	442
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	100.0
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	100.0
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	100.0
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	100.0
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	100.0
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	100.0
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	100.0
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	100.0
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	100.0
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	100.0
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	100.0
d1bxsa_	494	Aldehyde reductase (dehydrogenase), ALDH {Sheep (O	99.06
d1o04a_	494	Aldehyde reductase (dehydrogenase), ALDH {Human (H	98.99
d1uzba_	516	1-pyrroline-5-carboxylate dehydrogenase {Thermus t	98.98
d1wnda_	474	Putative betaine aldehyde dehydrogenase YdcW {Esch	98.98
d1a4sa_	503	Aldehyde reductase (dehydrogenase), ALDH {Baltic c	98.96
d1ad3a_	446	Aldehyde reductase (dehydrogenase), ALDH {Rat (Rat	98.93
d1ky8a_	499	Non-phosphorylating glyceraldehyde-3-phosphate deh	98.6
d1euha_	474	Aldehyde reductase (dehydrogenase), ALDH {Streptoc	98.46
d1o20a_	414	Gamma-glutamyl phosphate reductase {Thermotoga mar	98.16
d1ez0a_	504	Aldehyde reductase (dehydrogenase), ALDH {Vibrio h	97.59
d1vlua_	436	Gamma-glutamyl phosphate reductase {Baker's yeast	96.95
d1k75a_	431	L-histidinol dehydrogenase HisD {Escherichia coli	80.82

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=100.00  E-value=2.5e-75  Score=600.24  Aligned_cols=375  Identities=59%  Similarity=0.993  Sum_probs=353.2

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .|..+++.......+.++.+++++++|+|||+.++...|+..+++.+++++.+.++..++..+...+...++.++|+|||
T Consensus        77 eR~~iL~kia~~L~~~~eela~l~~~E~Gk~~~e~~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  156 (494)
T d1bxsa_          77 ERGRLLNKLADLIERDRLLLATMEAMNGGKLFSNAYLMDLGGCIKTLRYCAGWADKIQGRTIPMDGNFFTYTRSEPVGVC  156 (494)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHHTHHHHHHHHHHHHHHHGGGCCEEEECCSSSEEEEEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHhcCCchhhhhhhhhhhhhHHHHHHhhhhhhhcceeecCCCCceeEEEEccEEEE
Confidence            45566666655556667888999999999999998655999999999999999888777766665677889999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..++++|.++|+|+|++|+|+|++ ++++.|+.||+++.|.
T Consensus       157 ~~I~PwN~P~~~~~~~i~~ALaaGN~VVlKpse~tp~~a~~l~~~~~~aglP~gv~~~v~g~~~~~~~~l~~~p~v~~i~  236 (494)
T d1bxsa_         157 GQIIPWNFPLLMFLWKIGPALSCGNTVVVKPAEQTPLTALHMGSLIKEAGFPPGVVNIVPGYGPTAGAAISSHMDVDKVA  236 (494)
T ss_dssp             EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHHHHTCCTTSEEECCSCTTTHHHHHHTCTTCSEEE
T ss_pred             EEEeCccchhHHHHHHHHHHHHcCCeEEEECCCCChHHHHHHHHHHHHhCCCcCeEEEEeCCchHHHHHHHhCCCcCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999987 7899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.+++.++||+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++|
T Consensus       237 fTGS~~~g~~i~~~aa~~~~~~~~lElGG~np~iV~~dadl~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~~~d~f~~~l  316 (494)
T d1bxsa_         237 FTGSTEVGKLIKEAAGKSNLKRVSLELGGKSPCIVFADADLDNAVEFAHQGVFYHQGQCCIAASRLFVEESIYDEFVRRS  316 (494)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCCCCEEEECTTSCHHHHHHHHHHHHHTTTTCCTTCCCEEEEEHHHHHHHHHHH
T ss_pred             ecCCHHHHHHHHHHhcccCCCeEEEEcCCcCcEEECcCcchhHhHHHHHHHHhcCCCcccccceEEecccchhHHHHHHH
Confidence            99999999999998875578999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      +++++++++|+|.++++++||+++..+++++.++|++++.+|+++++||...++.|+|++|||+.++.+++.++++|+||
T Consensus       317 ~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~~E~FG  396 (494)
T d1bxsa_         317 VERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTVFSDVTDDMRIAKEEIFG  396 (494)
T ss_dssp             HHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEEEESCCTTSHHHHSCCCS
T ss_pred             HhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEEEeCCCCCcHHHhccccC
Confidence            99999999999999999999999999999999999999999999999998877889999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||+.++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|++..
T Consensus       397 Pvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~iN~~~~  452 (494)
T d1bxsa_         397 PVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVWVNCYSV  452 (494)
T ss_dssp             SEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEEESCCCC
T ss_pred             ceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEEEcCCCC
Confidence            99999999999999999999999999999999999999999999999999998753

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=100.00  E-value=1.6e-74  Score=593.92  Aligned_cols=375  Identities=65%  Similarity=1.064  Sum_probs=350.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .|..+++.......+.++.+++++++|+|||+.++...|+..++..+++++.++.+..++..+...+...+++++|+|||
T Consensus        77 eRa~iL~~~a~~l~~~~eela~~~~~E~GK~~~ea~~~ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  156 (494)
T d1o04a_          77 HRGRLLNRLADLIERDRTYLAALETLDNGKPYVISYLVDLDMVLKCLRYYAGWADKYHGKTIPIDGDFFSYTRHEPVGVC  156 (494)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTTCCEEEECCSSSEEEEEEEEECCEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCcchhhhhhhHHHHHHHHHHHHHHHHHHhcCceeccCCCceeEEEEecccEE
Confidence            34445555544445556667999999999999999755999999999999999888777666665667789999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEEe
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKVA  188 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v~  188 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|.++..+.++|.++|+|+|++|+|+|++ +.++.|+.||+++.|.
T Consensus       157 ~~I~P~N~P~~~~~~~~~~ALaaGN~VVlKps~~~p~~~~~l~~l~~~aglP~gv~~~v~g~~~~~g~~L~~~~~v~~v~  236 (494)
T d1o04a_         157 GQIIPWNFPLLMQAWKLGPALATGNVVVMKVAEQTPLTALYVANLIKEAGFPPGVVNIVPGFGPTAGAAIASHEDVDKVA  236 (494)
T ss_dssp             EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCBCTTTHHHHHHTCTTCCEEE
T ss_pred             EEECCcccHHHHHHHHHHHHHHcCCeEEEeCCCCCcHHHHHHHHHHHHhCcCcCeEEEEeCCChHHHHHHhhCCCcCEEE
Confidence            999999999999999999999999999999999999999999999999999999999999987 8899999999999999


Q ss_pred             ecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHH
Q psy5844         189 FTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARS  268 (442)
Q Consensus       189 ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l  268 (442)
                      ||||+.+|+.|++.++.+++||+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|+|||++++|+|++.|
T Consensus       237 fTGS~~~g~~i~~~aa~~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~~v~v~~~i~d~f~~~l  316 (494)
T d1o04a_         237 FTGSTEIGRVIQVAAGSSNLKRVTLELGGKSPNIIMSDADMDWAVEQAHFALFFNQGQCSCAGSRTFVQEDIYDEFVERS  316 (494)
T ss_dssp             EESCHHHHHHHHHHHHHTTCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHHHHHH
T ss_pred             EeCCHHHHHHHHHHhhccCCCeEEEECCCcCcEEEccCccHHHHHHhhhhhccccCcccccccccccccchhhHHHHHHH
Confidence            99999999999887764689999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHhhcC
Q psy5844         269 GERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEIFG  348 (442)
Q Consensus       269 ~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~fg  348 (442)
                      .++++.+++|+|.++++++||++++.+++++.+++++++++|+++++||....+.|+|++|||+.++.+++.++++|+||
T Consensus       317 ~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl~~~~~~~~~~~eE~FG  396 (494)
T d1o04a_         317 VARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVFGDVQDGMTIAKEEIFG  396 (494)
T ss_dssp             HHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEEESCCTTSHHHHSCCCS
T ss_pred             HHHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEEeCCCCCCHHHhccccC
Confidence            99999999999999999999999999999999999999999999999998877789999999999999999999999999


Q ss_pred             CcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         349 PVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       349 Pvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||+.++.|++++|+++++|+.++||+++|||+|.+.+.++++++++|.|++|++..
T Consensus       397 Pvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~  452 (494)
T d1o04a_         397 PVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVWVNCYDV  452 (494)
T ss_dssp             SEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCSSC
T ss_pred             ceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEEEcCCCC
Confidence            99999999999999999999999999999999999999999999999999997653

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=9.4e-73  Score=581.24  Aligned_cols=373  Identities=41%  Similarity=0.729  Sum_probs=350.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccCCCcceEEEeeccceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPINGDFFAYTRHEPVGVC  109 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~Gvv  109 (442)
                      .|.++++.......+.++.+++++++|+|||+.++.. |+..+++.+++++.+.++..+.....+.+...++.++|+|||
T Consensus        81 eR~~iL~~~a~~L~~~~eela~~~~~etGkp~~ea~~-ev~~~~~~l~~~a~~~~~~~~~~~~~~~~~~~~~~~~P~GVv  159 (503)
T d1a4sa_          81 ERSRVMLEAARIIRERRDNIAKLEVINNGKTITEAEY-DIDAAWQCIEYYAGLAPTLSGQHIQLPGGAFAYTRREPLGVC  159 (503)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHGGGCCEEEEECGGGCEEEEEEEECSEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHhhhhcchhhhh-hhhhhhhcccccccccccccccccccCCCcccccccccceee
Confidence            4555555555555566788899999999999999999 999999999999998877766555555667789999999999


Q ss_pred             EEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCccEEee
Q psy5844         110 GQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVDKVAF  189 (442)
Q Consensus       110 ~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~~v~f  189 (442)
                      ++|+|||||+...++++++||++||+||+|||+.+|+++..+++++.++|+|+|++|+|+|+.+.++.|+.||+++.|.|
T Consensus       160 ~~I~p~NfP~~~~~~~~~~ALaaGN~VV~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~e~g~~L~~~~~v~~V~f  239 (503)
T d1a4sa_         160 AGILAWNYPFMIAAWKCAPALACGNAVVFKPSPMTPVTGVILAEIFHEAGVPVGLVNVVQGGAETGSLLCHHPNVAKVSF  239 (503)
T ss_dssp             EEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHTTCCTTSEEECCCSHHHHHHHHHCTTCCEEEE
T ss_pred             ecccCCCChHHHHHHHHHHHHHcCCEEEEECCCCChHHHHHHHHHHHHhCcCCCeEEEecCCHHHHHHHHhCCCcCEEEE
Confidence            99999999999999999999999999999999999999999999999999999999999996699999999999999999


Q ss_pred             cCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHHHH
Q psy5844         190 TGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVARSG  269 (442)
Q Consensus       190 tGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~l~  269 (442)
                      |||+.+|+.|.+.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|+|||++++++|+++|.
T Consensus       240 TGS~~~G~~i~~~aa-~~~~~~~lElGG~~p~iV~~dAdl~~a~~~i~~~~~~~~GQ~C~a~~ri~v~~~~~~~~~~~l~  318 (503)
T d1a4sa_         240 TGSVPTGKKVMEMSA-KTVKHVTLELGGKSPLLIFKDCELENAVRGALMANFLTQGQVCTNGTRVFVQREIMPQFLEEVV  318 (503)
T ss_dssp             ESCHHHHHHHHHHHH-TTTCEEEEECCCCCEEEECTTSCHHHHHHHHHHTTCGGGGCCTTCCCEEEEEGGGHHHHHHHHH
T ss_pred             eCCHHHHHHHHHHhh-hcCCcEEEECCCcCcEEECCCccHHHHhhhhhcchhccCCCccccCcceEEEechhhhHHHHHH
Confidence            999999999999988 6899999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCccc------CCCCcccccceeccCcchhHHHH
Q psy5844         270 ERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRA------GDKGFYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       270 ~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~------~~~g~~v~pti~~~~~~~~~~~~  343 (442)
                      +.++++++|+|.+..+++||++++.+++++++++++++.+|+++++||...      ...|+|++|||+.++.+++.+++
T Consensus       319 ~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~~~~~~G~~~~Ptvl~~~~~~~~~~~  398 (503)
T d1a4sa_         319 KRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSDPKLKNGYFMSPCVLDNCRDDMTCVK  398 (503)
T ss_dssp             HHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSSGGGTTSCCBCCEEEESCCTTSHHHH
T ss_pred             HhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCCcccCCceEEcCEEEeCCCCCCHHHh
Confidence            999999999999999999999999999999999999999999999999753      24789999999999999999999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      +|+||||++++.|++.+|+++++|+.++||+++|||+|...+.++++++++|.|+||++..
T Consensus       399 ~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v~iN~~~~  459 (503)
T d1a4sa_         399 EEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTCYINTYSI  459 (503)
T ss_dssp             SCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEEEESCCCC
T ss_pred             ccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEEEEeCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999764

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=100.00  E-value=5.2e-71  Score=565.52  Aligned_cols=373  Identities=36%  Similarity=0.615  Sum_probs=340.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-CCcceEEEeeccce
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-GDFFAYTRHEPVGV  108 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~P~Gv  108 (442)
                      +|.+++........+.++.+++++++|+|||+.++...++..+...+++++...........+.. .+...+++++|+||
T Consensus        62 ~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P~GV  141 (474)
T d1wnda_          62 VRAECLLKLADVIEENGQVFAELESRNCGKPLHSAFNDEIPAIVDVFRFFAGAARCLNGLAAGEYLEGHTSMIRRDPLGV  141 (474)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHHTHHHHHHHHHHHHHHHTTCCEEECBEEEETTEEEEEEEEECSE
T ss_pred             HHHHHHHHHHHHHHhCHHHHHHHHHHHhCCChhHhhhcccccccccccccccccccccccccccccCCcceEEEEecccc
Confidence            55666666666666678888999999999999999874666777777776665543322222212 56778999999999


Q ss_pred             EEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccEE
Q psy5844         109 CGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDKV  187 (442)
Q Consensus       109 v~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~v  187 (442)
                      |++|+|||||+...++++++||++||+||+|||+.+|+++..+++++++ ++|+|++|+++|++ ++++.|+.||+++.|
T Consensus       142 V~~I~p~N~P~~~~~~~~a~ALaaGN~Vv~Kps~~~p~~~~~~~~l~~~-~lP~gv~~~v~g~~~~~g~~L~~~p~i~~v  220 (474)
T d1wnda_         142 VASIAPWNYPLMMAAWKLAPALAAGNCVVLKPSEITPLTALKLAELAKD-IFPAGVVNILFGRGKTVGDPLTGHPKVRMV  220 (474)
T ss_dssp             EEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTCCHHHHHHHHHHTT-TSCTTSEEECCCCTTTTHHHHHTCTTEEEE
T ss_pred             eEEEeecchHhhhhhccHHHHHHhCCCEEEeCCCcCcHHHHHHHHHHHH-hCCCCcEEEEeCCcHHHHHHHHhCCCcCEE
Confidence            9999999999999999999999999999999999999999999999977 59999999999987 899999999999999


Q ss_pred             eecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHHHH
Q psy5844         188 AFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFVAR  267 (442)
Q Consensus       188 ~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~~~  267 (442)
                      .||||+.+|+.|.+.++ .++||+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|+++
T Consensus       221 ~fTGS~~~G~~i~~~a~-~~~k~~~lElgG~~p~iV~~dad~~~a~~~i~~~~~~~~GQ~C~a~~rv~V~~~i~d~~~~~  299 (474)
T d1wnda_         221 SLTGSIATGEHIISHTA-SSIKRTHMELGGKAPVIVFDDADIEAVVEGVRTFGYYNAGQDCTAACRIYAQKGIYDTLVEK  299 (474)
T ss_dssp             EEESCHHHHHHHHHHHG-GGTCEEEEECCCCCEEEECTTSCHHHHHHHHHHHTTGGGGCSTTCCCEEEEETTTHHHHHHH
T ss_pred             EeeCCHHHHHHHHHhhh-cCCCeEEEEcCCCCceEEcCchhhhhhhhhhhhhcccCCCcccccccccccccccchhhhhh
Confidence            99999999999999988 58999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCC-EEEeCCcccCCCCcccccceeccCcchhHHHHHhh
Q psy5844         268 SGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGA-QLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREEI  346 (442)
Q Consensus       268 l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga-~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~  346 (442)
                      |++.++++++|+|.++++++||+++..+.+++.+++++++..|+ .++.|+....+.|+|+.|||+.++.+++.++++|+
T Consensus       300 l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g~~~~Ptil~~~~~~~~~~~eE~  379 (474)
T d1wnda_         300 LGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNGYYYAPTLLAGALQDDAIVQKEV  379 (474)
T ss_dssp             HHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSSCCBCCEEEECCCTTSHHHHSCC
T ss_pred             hHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCceEEeeeEeecccccccceeecc
Confidence            99999999999999999999999999999999999999999998 46666666667899999999999999999999999


Q ss_pred             cCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHH
Q psy5844         347 FGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIE  404 (442)
Q Consensus       347 fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~  404 (442)
                      ||||+++++|++++|+++++|+.++||+++|||+|.+.+.++++++++|.|+||++..
T Consensus       380 FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~iN~~~~  437 (474)
T d1wnda_         380 FGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTWVNTHFM  437 (474)
T ss_dssp             CSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEEESCCCC
T ss_pred             cCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEEEeCCCC
Confidence            9999999999999999999999999999999999999999999999999999998753

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=100.00  E-value=6.7e-71  Score=569.79  Aligned_cols=373  Identities=32%  Similarity=0.534  Sum_probs=342.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccccc-C-CCcceEEEeeccc
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPI-N-GDFFAYTRHEPVG  107 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~P~G  107 (442)
                      +|..+++.......+.++.+++++++|+|||+.++.. |+.++++.+++++..+....+..... + .+...+.+++|+|
T Consensus        97 ~R~~iL~~~a~~l~~~~~ela~~~~~e~Gk~~~~a~~-ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~P~G  175 (516)
T d1uzba_          97 DRSRLLLKAAALMRRRKRELEATLVYEVGKNWVEASA-DVAEAIDFIEYYARAALRYRYPAVEVVPYPGEDNESFYVPLG  175 (516)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHGGGCSSCCCCCCCTTEEEEEEEEECC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCccccch-hHHHHHHHHHHHHHHHHhhhhcccccccccccceeEEeeccC
Confidence            4556666665555566788899999999999999998 99999999999998887665443222 2 4566788999999


Q ss_pred             eEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCCCccE
Q psy5844         108 VCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHPGVDK  186 (442)
Q Consensus       108 vv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~~v~~  186 (442)
                      ||++|+|||||+...++++++||++||+||+|||+.+|+++..+.++|.++|+|+|++|+++|++ +.++.|+.||+++.
T Consensus       176 vv~~I~PwN~Pl~~~~~~~~~ALaaGN~Vv~Kps~~~p~~~~~l~~~~~~aglP~gv~~~v~g~~~~~~~~L~~hp~v~~  255 (516)
T d1uzba_         176 AGVVIAPWNFPVAIFTGMIVGPVAVGNTVIAKPAEDAVVVGAKVFEIFHEAGFPPGVVNFLPGVGEEVGAYLVEHPRIRF  255 (516)
T ss_dssp             EEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHHTCCTTSEEECCCSSSHHHHHHHTCTTCCE
T ss_pred             ccccccccccccccccccccchhhhcccccccccchhHHHHHHHHHHHHHhCcCcCeEEEccCChHHHHHHHHhCCCcCE
Confidence            99999999999999999999999999999999999999999999999999999999999999987 89999999999999


Q ss_pred             EeecCCHHHHHHHHhhccC-----CCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccH
Q psy5844         187 VAFTGSTEVGKLVQQGSGA-----SNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIY  261 (442)
Q Consensus       187 v~ftGs~~~~~~i~~~~~~-----~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~  261 (442)
                      |.||||+.+|+.|++.++.     .++||+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|+|||++++
T Consensus       256 I~FTGs~~~G~~i~~~aa~~~~~~~~~k~v~lElgG~~p~iV~~dAd~~~aa~~i~~~~~~~~GQ~C~a~~ri~v~~~i~  335 (516)
T d1uzba_         256 INFTGSLEVGLKIYEAAGRLAPGQTWFKRAYVETGGKNAIIVDETADFDLAAEGVVVSAYGFQGQKCSAASRLILTQGAY  335 (516)
T ss_dssp             EEEESCHHHHHHHHHHHTSCCTTCCSCCEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCSTTCEEEEEEEHHHH
T ss_pred             EecccchhHHHHHHHHHhhcccchhhhhhheeeccCccceeeecchhHHHHHHHHhhhhcccCCCcccccCccccccccc
Confidence            9999999999999987762     46899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHH
Q psy5844         262 DEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKI  341 (442)
Q Consensus       262 ~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~  341 (442)
                      |+|++++.++++++++| |.++++++||+++..+++++.+++++++..|+.+ +||...+..|+|++|||+.++.+++.+
T Consensus       336 d~~~~~~~~~~~~l~~g-~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v-~~g~~~~~~g~~~~Ptvl~~v~~~~~~  413 (516)
T d1uzba_         336 EPVLERVLKRAERLSVG-PAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLV-LGGKRLEGEGYFIAPTVFTEVPPKARI  413 (516)
T ss_dssp             HHHHHHHHHHHTTCCBS-CGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEE-ECCSBCSSSSCCBCCEEEESCCTTSGG
T ss_pred             cchhhHHHHHHHhcccC-CCcccCccccccCHHHHHHHHHHHHHHHHCCCEE-ECCCcCCCCCceECCEEEecCCCCchh
Confidence            99999999999999999 6688899999999999999999999999888655 667666668999999999999999999


Q ss_pred             HHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         342 AREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       342 ~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      +++|+||||+.++.|++++|+++++|+.+|||+++|||+|.+.++++++++++|+|++|+....
T Consensus       414 ~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~iN~~~~~  477 (516)
T d1uzba_         414 AQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLYFNRKITG  477 (516)
T ss_dssp             GTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEEESSCSCC
T ss_pred             hcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEcCCCCC
Confidence            9999999999999999999999999999999999999999999999999999999999987643

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=100.00  E-value=1.9e-65  Score=527.31  Aligned_cols=373  Identities=29%  Similarity=0.448  Sum_probs=334.3

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccccC-----CCcceEEEee
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIPIN-----GDFFAYTRHE  104 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~  104 (442)
                      +|.++++.......+.++.+++++++|+|||..++.. |+.++++.+++++..+++..+......     .+...+++++
T Consensus        76 ~R~~iL~~~a~~l~~~~~~la~~~~~etGk~~~~a~~-Ev~~~i~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~r~  154 (499)
T d1ky8a_          76 ERLAVLRKAADIIERNLDVFAEVLVMNAGKPKSAAVG-EVKAAVDRLRLAELDLKKIGGDYIPGDWTYDTLETEGLVRRE  154 (499)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHGGGGGGTTTCCEEEESTTSSTTTTEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCHHHHhh-hhhcccccccchhhhhhhhhhceeccccccccccccceeeee
Confidence            3455555554544455788899999999999999998 999999999999988876654432211     3456789999


Q ss_pred             ccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCc
Q psy5844         105 PVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGV  184 (442)
Q Consensus       105 P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v  184 (442)
                      |+|||++|+|||||+...++++++||++||+||+|||+.+|.++..+.+++.++|+|+++++++.++++....|+.||.+
T Consensus       155 P~GVV~~I~p~N~P~~~~~~~~~~ALaaGn~Vi~Kps~~~~~~~~~l~~~~~~~~~p~~~~~~~~~~~~~~~~l~~~~~i  234 (499)
T d1ky8a_         155 PLGVVAAITPFNYPLFDAVNKITYSFIYGNAVVVKPSISDPLPAAMAVKALLDAGFPPDAIALLNLPGKEAEKIVADDRV  234 (499)
T ss_dssp             ECSEEEEECCSSSHHHHHHHHHHHHHHTTCEEEEECCTTSCHHHHHHHHHHHHHTCCTTSEEECCCCGGGGHHHHHCTTC
T ss_pred             ccccccccccccccchhhhhcchhhhcccccccccccccchhhhhhhccccccccccceeeecccCChHHHHHHhhccce
Confidence            99999999999999999999999999999999999999999999999999999999999999999988888999999999


Q ss_pred             cEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHH
Q psy5844         185 DKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEF  264 (442)
Q Consensus       185 ~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f  264 (442)
                      +.+.||||+..++.+.+.++   .+|+++|+||+||+||++|||++.|++.+++++|.|+||.|++++|||||++++|+|
T Consensus       235 ~~v~ftGs~~~g~~i~~~~~---~~~~~lElgG~np~iV~~dAdl~~aa~~i~~~~~~~~GQ~C~a~~~v~V~~~v~d~f  311 (499)
T d1ky8a_         235 AAVSFTGSTEVGERVVKVGG---VKQYVMELGGGDPAIVLEDADLDLAADKIARGIYSYAGQRCDAIKLVLAERPVYGKL  311 (499)
T ss_dssp             CEEEEESCHHHHHHHHHHHC---SSEEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCTTCEEEEEEEHHHHHHH
T ss_pred             eEEEeecccccceEEeeccc---ccceEEecCCCCeEEEcCCcChhhhhhhhhhhhhccCcccccccccccccchhHHHH
Confidence            99999999999999998765   479999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCC-cccccceeccCcchhHHHH
Q psy5844         265 VARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKG-FYVQPTVFANVRDDMKIAR  343 (442)
Q Consensus       265 ~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g-~~v~pti~~~~~~~~~~~~  343 (442)
                      +++|+++++++++|+|.|+++++||+++..+++++++++++++.+|++++.||....... .+..+++...+..++.+++
T Consensus       312 ~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~  391 (499)
T d1ky8a_         312 VEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEAPADRVKDMVLYK  391 (499)
T ss_dssp             HHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEECCHHHHTTSHHHH
T ss_pred             HHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccccccccccccccccCCCCChhhh
Confidence            999999999999999999999999999999999999999999999999999987643221 1112233344556889999


Q ss_pred             HhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHH
Q psy5844         344 EEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEV  406 (442)
Q Consensus       344 ~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~a  406 (442)
                      +|+||||++++.|++.+|+++++|..+++|+++|||+|.+.+.++++++++|+|+||+....+
T Consensus       392 eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~iN~~~~~~  454 (499)
T d1ky8a_         392 REVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIYINDMPRHG  454 (499)
T ss_dssp             SCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEEETSCCCCT
T ss_pred             ccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEEEeCCCCCC
Confidence            999999999999999999999999999999999999999999999999999999999987554

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=100.00  E-value=2.6e-64  Score=511.42  Aligned_cols=366  Identities=26%  Similarity=0.370  Sum_probs=323.4

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCc-cccc---CCCcceEEEeec
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGK-TIPI---NGDFFAYTRHEP  105 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~-~~~~---~~~~~~~~~~~P  105 (442)
                      .|.++++.......++++.+++++++|+|||..++...|+..+++.+++++..+...... ....   ..+...++.++|
T Consensus        23 ~R~~iL~~~a~~l~~~~~~l~~~~~~e~GK~~~ea~~~ev~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~P  102 (446)
T d1ad3a_          23 FRIQQLEALQRMINENLKSISGALASDLGKNEWTSYYEEVAHVLEELDTTIKELPDWAEDEPVAKTRQTQQDDLYIHSEP  102 (446)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTHHHHHHHHHHHHHHHHHHHSCEECCCCSTTTTSEEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHCHHHHHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHHHHHHHhhcccccccCCCCCCcceEEEeec
Confidence            345555666566667889999999999999999997659999999999988766443222 1111   144567889999


Q ss_pred             cceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCccchhhhhcCCCcc
Q psy5844         106 VGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYGDAGAALVQHPGVD  185 (442)
Q Consensus       106 ~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~~~~~~l~~~~~v~  185 (442)
                      +|||++|+|||||+...++++++||++||+||+|||+.+|.++..+++++.+. +|+++++++.+.+.....+. ++.++
T Consensus       103 ~GVv~~I~P~N~P~~~~~~~~~~ALaaGN~vi~Kps~~~p~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~~  180 (446)
T d1ad3a_         103 LGVVLVIGAWNYPFNLTIQPMVGAVAAGNAVILKPSEVSGHMADLLATLIPQY-MDQNLYLVVKGGVPETTELL-KERFD  180 (446)
T ss_dssp             CSEEEEECCSSSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHH-SCTTTEEECCCSHHHHHHHT-TSCCS
T ss_pred             ceeEecccccccccccccccccccchhcccccccccceecccccccccccccc-ccccccccccccchhhhhhc-ccccC
Confidence            99999999999999999999999999999999999999999999999998774 99999999998774444444 56799


Q ss_pred             EEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHHHHH
Q psy5844         186 KVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYDEFV  265 (442)
Q Consensus       186 ~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~~f~  265 (442)
                      .|.||||+.+|+.|.+.++ .+++|+++|+|||||+||++|||++.|++.+++++|.|+||.|++++|||||++++++|+
T Consensus       181 ~v~fTGs~~~G~~i~~~aa-~~~~~~~lElgG~np~iV~~dADl~~Aa~~iv~~~~~~~GQ~C~a~~rv~v~~~i~~~f~  259 (446)
T d1ad3a_         181 HIMYTGSTAVGKIVMAAAA-KHLTPVTLELGGKSPCYVDKDCDLDVACRRIAWGKFMNSGQTCVAPDYILCDPSIQNQIV  259 (446)
T ss_dssp             EEEEESCHHHHHHHHHHHH-TTTCCEEEECCCCCEEEECSSSCHHHHHHHHHHHHHTTTTCCTTSCCEEEECGGGHHHHH
T ss_pred             ceEEECcHHHHHHHHHHHH-hcCCcEEEECCCcCcEEEecCCchHHHHHHHHHHHhcCCCCccccCCccccccchhHHHH
Confidence            9999999999999999988 689999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHHHHh
Q psy5844         266 ARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIAREE  345 (442)
Q Consensus       266 ~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~~~e  345 (442)
                      ++|.+.++.+ +|+|.++++++||++++.+.+++.++++.+     +...|+. .+..++|+.|||+.++.+++.++++|
T Consensus       260 ~~l~~~~~~~-~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a-----~~~~g~~-~~~~~~~~~Ptil~~v~~~~~~~~eE  332 (446)
T d1ad3a_         260 EKLKKSLKDF-YGEDAKQSRDYGRIINDRHFQRVKGLIDNQ-----KVAHGGT-WDQSSRYIAPTILVDVDPQSPVMQEE  332 (446)
T ss_dssp             HHHHHHHHHH-HCSCGGGCTTSCCCSCHHHHHHHHHTTTTS-----CEEECCC-EETTTTEECCEEECSCCTTSGGGTSC
T ss_pred             Hhhhhhhhee-ecccccccccccchhhhhhhhhhhccccch-----hccccee-ecCCCCCcCCEEEECCCCCCHHHhCc
Confidence            9999999887 899999999999999999999998887543     3333333 34567899999999999999999999


Q ss_pred             hcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         346 IFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       346 ~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      +||||++++.|++++|+|+++|+.++||+++|||+|.+.+.++++++++|.|++|+....
T Consensus       333 ~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~iN~~~~~  392 (446)
T d1ad3a_         333 IFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVTANDVIVH  392 (446)
T ss_dssp             CCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEEESSSSGG
T ss_pred             ccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEEEeCCccC
Confidence            999999999999999999999999999999999999999999999999999999987644

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=100.00  E-value=2.5e-61  Score=494.54  Aligned_cols=368  Identities=32%  Similarity=0.516  Sum_probs=334.0

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCccc-----c-cCCCcceEEEe
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTI-----P-INGDFFAYTRH  103 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~-----~-~~~~~~~~~~~  103 (442)
                      +|.++++.......+.++.+++++++|+|||..++.. |+...+..++++............     . ...+...++++
T Consensus        62 ~R~~iL~~~a~~L~~~~~~la~~~~~e~Gk~~~~a~~-e~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r  140 (474)
T d1euha_          62 ERAAYLHKVADILMRDKEKIGAILSKEVAKGYKSAVS-EVVRTAEIINYAAEEGLRMEGEVLEGGSFEAASKKKIAVVRR  140 (474)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHTCCHHHHHH-HHHHHHHHHHHHHHHHTTCCEEEEEGGGTCGGGTTEEEEEEE
T ss_pred             HHHHHHHHHHHHHHHhHHHHHHHHHHHhCCCcchhcc-ccchhHHHHHHHHHHHhhhhcccccccccccccCCceeEEEe
Confidence            4556666665555566778899999999999999999 999999999998876643322111     1 11456678999


Q ss_pred             eccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCCCCCcEEeecCCc-cchhhhhcCC
Q psy5844         104 EPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGIPEGVVNIVPGYG-DAGAALVQHP  182 (442)
Q Consensus       104 ~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~aglp~~~~~~v~~~~-~~~~~l~~~~  182 (442)
                      +|+|||++|+|||||+...++.+++||++||+||+|||+.+|.++..++++|.++|+|+|++|+++|++ ++++.|+.||
T Consensus       141 ~P~GVV~~I~p~n~P~~~~~~~~~~aL~aGN~vV~Kps~~~~~~~~~l~~~~~eaglP~gv~~~i~g~~~~~~~~L~~~~  220 (474)
T d1euha_         141 EPVGLVLAISPFNYPVNLAGSKIAPALIAGNVIAFKPPTQGSISGLLLAEAFAEAGLPAGVFNTITGRGSEIGDYIVEHQ  220 (474)
T ss_dssp             EECSEEEEECCTTSTTHHHHHHHHHHHHTTCEEEEECCSTTHHHHHHHHHHHHHHTCCTTTEEECCCCHHHHHHHHHHCT
T ss_pred             eceeEEEEeccccccchhhhhhchhhhhccccceecccccchHHHHHHHHHHHHhCCCcCeEEEccCChHHHHHHHHhCC
Confidence            999999999999999999999999999999999999999999999999999999999999999999987 8999999999


Q ss_pred             CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhccCCCcccCCCEEEEcCccHH
Q psy5844         183 GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFNMGQCCCAGSRTFVQDTIYD  262 (442)
Q Consensus       183 ~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~s~~~v~V~~~~~~  262 (442)
                      +++.|.||||+.+++.+.+.++   .+|+++|+||+||+||++|||++.|++.+++++|.++||.|+++++||||+++++
T Consensus       221 ~v~~v~ftGs~~~~~~i~~~a~---~k~~~~e~gG~~~~iV~~dAdl~~aa~~i~~~~~~~~Gq~C~a~~~i~v~~~~~~  297 (474)
T d1euha_         221 AVNFINFTGSTGIGERIGKMAG---MRPIMLELGGKDSAIVLEDADLELTAKNIIAGAFGYSGQRCTAVKRVLVMESVAD  297 (474)
T ss_dssp             TCCEEEEESCHHHHHHHHHHTT---TSCEEEECCCCEEEEECTTSCHHHHHHHHHHHHHGGGGCCSSSEEEEEEEHHHHH
T ss_pred             CccEEEecCccccccchhhhcc---cceEEEecCCcceEEEECCCchhhHHHHHHHHHhhCCCCccccccccchhhhhhh
Confidence            9999999999999999998754   5899999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccccceeccCcchhHHH
Q psy5844         263 EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQPTVFANVRDDMKIA  342 (442)
Q Consensus       263 ~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~pti~~~~~~~~~~~  342 (442)
                      +|++.++.+...++.|++.+. .+++|++.....+++.+.+......+.....++.   ..|+|+.||++..+.+++.++
T Consensus       298 ~~~~~l~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~g~~~~Ptvl~~~~~~~~~~  373 (474)
T d1euha_         298 ELVEKIREKVLALTIGNPEDD-ADITPLIDTKSADYVEGLINDANDKGATALTEIK---REGNLICPILFDKVTTDMRLA  373 (474)
T ss_dssp             HHHHHHHHHHHTSCBSCGGGT-CSBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCC---EETTEECCEEEESCCTTSGGG
T ss_pred             hhhHhhhhhhhhccccCcccc-cccccccchHHHHHHHHHHHhhhcccccccccCC---CCCCCcCCEEEecCCCcchhh
Confidence            999999999999999999886 5689999999999999999999988887765543   368999999999999999999


Q ss_pred             HHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHH
Q psy5844         343 REEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEE  405 (442)
Q Consensus       343 ~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~  405 (442)
                      .+|+||||++++.|++++|+|+++|+.+++|+++|||+|.+.++++++++++|.|++|++...
T Consensus       374 ~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~iN~~~~~  436 (474)
T d1euha_         374 WEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVHINNKTQR  436 (474)
T ss_dssp             TSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEEESSCCCC
T ss_pred             hcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEEEECCCCC
Confidence            999999999999999999999999999999999999999999999999999999999987543

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=100.00  E-value=1.6e-58  Score=475.06  Aligned_cols=360  Identities=19%  Similarity=0.238  Sum_probs=296.6

Q ss_pred             CCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhHHHHHHHHHHHHHHhHhhhcCcccc--------cC-CCcceE
Q psy5844          30 TKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVDVEYSLRTLRYYAGFADKIHGKTIP--------IN-GDFFAY  100 (442)
Q Consensus        30 ~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~ev~~~~~~~~~~~~~~~~~~~~~~~--------~~-~~~~~~  100 (442)
                      .|.++++.......+.++.+++++++|+|||+.++.. |+..+++.++|+++.+++.......        .+ .+...+
T Consensus        49 ~R~~iL~~~a~~l~~~~~~la~~~~~e~Gkp~~~a~~-Ev~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  127 (504)
T d1ez0a_          49 KRASLLRTIASELEARSDDIIARAHLETALPEVRLTG-EIARTANQLRLFADVVNSGSYHQAILDTPNPTRAPLPKPDIR  127 (504)
T ss_dssp             HHHHHHHHHHHHHHHTHHHHHHHHHHHHCCCHHHHHH-HHHHHHHHHHHHHHHHHHTGGGCEEEECCBTTCSSSCBCCEE
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHH-HHHHHHHHHHHHHHHHhhhccccccccccccccccCccccee
Confidence            4556666665655667788899999999999999998 9999999999999887654332111        11 345678


Q ss_pred             EEeeccceEEEecccccchHHH--HhhhhhhhccCCeEEecCCCCChHHHHHHHH----HHHHhCCCCCcEEeecCCc-c
Q psy5844         101 TRHEPVGVCGQIIPWNFPLLML--AWKIAPALATGNTIVLKPAEQTPLTALAVGA----LIAEAGIPEGVVNIVPGYG-D  173 (442)
Q Consensus       101 ~~~~P~Gvv~~i~p~n~P~~~~--~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~----~l~~aglp~~~~~~v~~~~-~  173 (442)
                      .+++|+|||++|+|||||+...  .+++++||++||+||+|||+.+|.++..+.+    +|.++|+|+|++|+++|++ +
T Consensus       128 ~~~~P~GvV~~I~PwNfPl~~~~~~~~~a~ALaaGN~VVlKPs~~tp~ta~~~~~li~~a~~~aGlP~Gv~~~v~g~~~~  207 (504)
T d1ez0a_         128 RQQIALGPVAVFGASNFPLAFSAAGGDTASALAAGCPVIVKGHTAHPGTSQIVAECIEQALKQEQLPQAIFTLLQGNQRA  207 (504)
T ss_dssp             EEEEECSCEEEECCSSCTTTTSTTSHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHHHHTCCGGGEEEECCSCTH
T ss_pred             EEEecCceEEEEecccccchhhhhhHHHHHHHHHhccceecCcccccchhhhhhhHHHHHhhhhccccCceecccccccc
Confidence            8999999999999999998644  4689999999999999999999998877654    5567799999999999987 8


Q ss_pred             chhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCcee--eeecCCCCceEEeCCCCHHHHH--HHHHHHhhccCCCccc
Q psy5844         174 AGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRT--TLELGGKSPNIIFADADLDAAV--EGAHFGLFFNMGQCCC  249 (442)
Q Consensus       174 ~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~--~~e~gG~~~~iV~~dad~~~a~--~~i~~~~~~~~Gq~C~  249 (442)
                      +++.|+.||+++.|.||||+.+|+.|.+.++ .+++|+  ++|+|||||+||++|||+++|+  ..++.++|.|+||.|+
T Consensus       208 ~g~~L~~~p~v~~V~FTGS~~~g~~i~~~aa-~~~~~~~l~~ElGGknp~iV~~dAd~~~Aa~~~~~~~~~~~~~GQ~C~  286 (504)
T d1ez0a_         208 LGQALVSHPEIKAVGFTGSVGGGRALFNLAH-ERPEPIPFYGELGAINPTFIFPSAMRAKADLADQFVASMTMGCGQFCT  286 (504)
T ss_dssp             HHHHHHHCTTCCEEEEESCHHHHHHHHHHHH-HSSSCCCEEEECCCCCEEEECHHHHHHCTTHHHHHHHHHTGGGGCCTT
T ss_pred             cccccccccccceeeeccchHHHHHHHhhhh-cccccccccccccccccccccccccHHHHhhhhccccchhhccCcccc
Confidence            8999999999999999999999999999887 466665  5599999999999999999875  4789999999999999


Q ss_pred             CCCEEEEcCccHH-HHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCcccc
Q psy5844         250 AGSRTFVQDTIYD-EFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQ  328 (442)
Q Consensus       250 s~~~v~V~~~~~~-~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~  328 (442)
                      +++|+||+++.++ .|++.+.+.++.   +   ++++.+||+++..+.+++   ++.+...|+.+..|+..    +.+..
T Consensus       287 a~~rv~v~~~~~~~~~~~~~~~~~~~---~---~~~~~~gp~i~~~~~~~v---i~~~~~~~~~~~~~~~~----~~~~~  353 (504)
T d1ez0a_         287 KPGVVFALNTPETQAFIETAQSLIRQ---Q---SPSTLLTPGIRDSYQSQV---VSRGSDDGIDVTFSQAE----SPCVA  353 (504)
T ss_dssp             CCCEEEEESSHHHHHHHHHHHHHHHH---C---CCBCCSSHHHHHHHHHHH---HHHHTSTTEEEEECCCC----TTSBC
T ss_pred             ccccccchhhhhHHHHhhhhhhhhhh---c---ccccccccchhhhhhhhh---hhhhhhhhhhccccccc----ccccC
Confidence            9999998887654 576666665543   2   457889999998887775   55667778888887653    33445


Q ss_pred             cceeccC---cchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCC--hhhhhccccE--eeeEEeeC
Q psy5844         329 PTVFANV---RDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLD--KTNYVTQGLR--AGTLIRFS  401 (442)
Q Consensus       329 pti~~~~---~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~--~~~~~~~~~~--~G~V~vN~  401 (442)
                      |.++...   ..++.++++|+||||+.+++|++++|+++++|+.++||+++|||+|.+  ++.+++++++  +|+|++|+
T Consensus       354 ~~~~~~~~~~~~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~iN~  433 (504)
T d1ez0a_         354 SALFVTSSENWRKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLVFNG  433 (504)
T ss_dssp             CEEEEEEHHHHHHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEEESS
T ss_pred             CccccccccccccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEEEcC
Confidence            5544332   234567889999999999999999999999999999999999997554  7788999886  89999998


Q ss_pred             CHH
Q psy5844         402 SIE  404 (442)
Q Consensus       402 ~~~  404 (442)
                      .+.
T Consensus       434 ~~t  436 (504)
T d1ez0a_         434 WPT  436 (504)
T ss_dssp             CSS
T ss_pred             Ccc
Confidence            654

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=3.4e-49  Score=397.08  Aligned_cols=337  Identities=17%  Similarity=0.125  Sum_probs=257.0

Q ss_pred             CCCCccccchhhhcCccccHHHHHHHHHcCCChhhhchhH------------HHHHHHHHHHHHHhHhhhcCcccccCCC
Q psy5844          29 ITKPKIEHTQLFINNEFVNAQSSLETLDNGKPYNMSYSVD------------VEYSLRTLRYYAGFADKIHGKTIPINGD   96 (442)
Q Consensus        29 ~~~~~~~~~~~~~~~~~~~~~~~~~~~e~Gk~~~~a~~~e------------v~~~~~~~~~~~~~~~~~~~~~~~~~~~   96 (442)
                      ..|..+++.......++++.+++++++|+||+..++.. |            ++.+++.+++++.......+........
T Consensus        23 ~eR~~iL~k~a~~l~~~~~eia~~~~~e~gk~~~~~~~-e~~~~rl~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (414)
T d1o20a_          23 REKNKAIKKIAEKLDERRKEILEANRIDVEKARERGVK-ESLVDRLALNDKRIDEMIKACETVIGLKDPVGEVIDSWVRE  101 (414)
T ss_dssp             HHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTTCC-HHHHHHHCCCHHHHHHHHHHHHHHHHSCCCTTCEEEEEECT
T ss_pred             HHHHHHHHHHHHHHHHhHHHHHHHHHHHHhhHHhcccc-HHHHHHHhccHHHHHHHHHHHHHHHHhhhhccccccccccc
Confidence            35667777777777788899999999999999998866 5            5667777777776654443333332233


Q ss_pred             cceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHHHhCC----CCCcEEeecCCc
Q psy5844          97 FFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIAEAGI----PEGVVNIVPGYG  172 (442)
Q Consensus        97 ~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~~agl----p~~~~~~v~~~~  172 (442)
                      ......++|+|+++++.|||||+...++++++||++||+||+|||+.+|.++..+++++.+++.    |.++++.+.+..
T Consensus       102 ~~~~~~~~~~gv~~~~~p~n~p~~~~~~~~~~alaaGN~vvlKps~~tp~~~~~~~~l~~~a~~~~~~~~~~~~~~~~~~  181 (414)
T d1o20a_         102 DGLRIARVRVPIGPIGIIYESRPNVTVETTILALKSGNTILLRGGSDALNSNKAIVSAIREALKETEIPESSVEFIENTD  181 (414)
T ss_dssp             TSCEEEEEEEECCCEEEECCSCTHHHHHHHHHHHHTTCCEEEECCGGGHHHHHHHHHHHHHHHTTSSSCGGGEEECCCCC
T ss_pred             cccceeecccccccccccccCcHHHhhhccchheecccchhcccccccccccchhhhHHHhhhhhccccccccccccccc
Confidence            4567788899999999999999999999999999999999999999999999999999988744    445566666544


Q ss_pred             -cchhhhhcCC-CccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCC-ceEEeCCCCHHHHHHHHHHHhhccCCCccc
Q psy5844         173 -DAGAALVQHP-GVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKS-PNIIFADADLDAAVEGAHFGLFFNMGQCCC  249 (442)
Q Consensus       173 -~~~~~l~~~~-~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~-~~iV~~dad~~~a~~~i~~~~~~~~Gq~C~  249 (442)
                       +....+..++ .....+++|+...++...+     ..+++++|+||+| ++||++|||++.|++.++.++|.| ||.|+
T Consensus       182 ~~~~~~~~~~~~~~~~~~~~~~~~v~~~a~~-----~~~~~~le~gGgn~~viv~~dAd~~~A~~~~~~~~~~~-gq~C~  255 (414)
T d1o20a_         182 RSLVLEMIRLREYLSLVIPRGGYGLISFVRD-----NATVPVLETGVGNCHIFVDESADLKKAVPVIINAKTQR-PGTCN  255 (414)
T ss_dssp             THHHHHHTTCTTTCSEEEECSCHHHHHHHHH-----HCSSCBCCCCCCCEEEEECTTSCHHHHHHHHHHHHHSC-TTSTT
T ss_pred             hhhhhhcccccccCeEEEcccHHHHHHHhhh-----ccccceecccCCCCCeecccccchhhhhhHHHhhhhcC-Ccccc
Confidence             4555555433 3344445555544443333     4566777777755 578889999999999999999977 99999


Q ss_pred             CCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCCCccccc
Q psy5844         250 AGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDKGFYVQP  329 (442)
Q Consensus       250 s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~v~p  329 (442)
                      +++|+|||++++|+|+++|.+...+..++.+.++..                                       ..+.+
T Consensus       256 a~~r~~V~~~i~d~f~~~l~~~~~~~~~~~~~~~~~---------------------------------------~~~~~  296 (414)
T d1o20a_         256 AAEKLLVHEKIAKEFLPVIVEELRKHGVEVRGCEKT---------------------------------------REIVP  296 (414)
T ss_dssp             SEEEEEEEHHHHHHHHHHHHHHHHHTTCEEEECHHH---------------------------------------HHHST
T ss_pred             cccccchhHHHHHHHHHHHhHHHHHcCCccccchhh---------------------------------------hhhcc
Confidence            999999999999999999999888765544332210                                       01111


Q ss_pred             ceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCHHHHHHh
Q psy5844         330 TVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSIEEVIER  409 (442)
Q Consensus       330 ti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~~~av~~  409 (442)
                      .+.....+.   +.+|+|||+++++.|++++|||+++|+++|||+++|||+|.++++++++++++|.|+||+++.    .
T Consensus       297 ~~~~~~~~~---~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~IN~~~~----~  369 (414)
T d1o20a_         297 DVVPATEDD---WPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVYVNASTR----F  369 (414)
T ss_dssp             TSEECCGGG---TTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEEESSCGG----G
T ss_pred             cceeccccc---CCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEEEeCCCc----C
Confidence            222211222   357999999999999999999999999999999999999999999999999999999998763    2


Q ss_pred             hccCCccce
Q psy5844         410 ANNSDYGLA  418 (442)
Q Consensus       410 an~~~yGl~  418 (442)
                      .....||++
T Consensus       370 ~~~~~~g~g  378 (414)
T d1o20a_         370 TDGGQFGFG  378 (414)
T ss_dssp             CSTTTTTCS
T ss_pred             CCCCCCCCC
Confidence            333455554

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.4e-41  Score=340.95  Aligned_cols=358  Identities=18%  Similarity=0.131  Sum_probs=244.4

Q ss_pred             CCCCCCccccchhhhcCccccHHHHH------HHHHcCCChhhhc------hhHHHHHHHHHHHHHHhHhhhcCccc---
Q psy5844          27 KPITKPKIEHTQLFINNEFVNAQSSL------ETLDNGKPYNMSY------SVDVEYSLRTLRYYAGFADKIHGKTI---   91 (442)
Q Consensus        27 ~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~e~Gk~~~~a~------~~ev~~~~~~~~~~~~~~~~~~~~~~---   91 (442)
                      +..++.++++.......+.++.+.+.      .+.+.|++.....      ..-+...++.++..+.+.++. +...   
T Consensus        23 s~~~R~~iL~~~a~~L~~~~~eI~~aN~~Dl~~a~~~g~~~~~idRL~l~~~~ri~~~~~~l~~i~~~~dpv-g~~~~~~  101 (436)
T d1vlua_          23 SNEGRSDILYKIHDALKANAHAIEEANKIDLAVAKETGLADSLLKRLDLFKGDKFEVMLQGIKDVAELEDPV-GKVKMAR  101 (436)
T ss_dssp             CHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHHHHHHSSCCHHHHHHHCTTSTTHHHHHHHHHHHHHHSCCSS-SCEEEEE
T ss_pred             CHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHcCCcHHHHHHHhcCchHHHHHHHHHHHHHHhccccc-eeEeeee
Confidence            34456677777766555556665432      3556676543210      102445555566555544333 3322   


Q ss_pred             ccCCCcceEEEeeccceEEEecccccchHHHHhhhhhhhccCCeEEecCCCCChHHHHHHHHHHH--------HhCCCCC
Q psy5844          92 PINGDFFAYTRHEPVGVCGQIIPWNFPLLMLAWKIAPALATGNTIVLKPAEQTPLTALAVGALIA--------EAGIPEG  163 (442)
Q Consensus        92 ~~~~~~~~~~~~~P~Gvv~~i~p~n~P~~~~~~~~~~aL~~Gn~vv~kps~~~~~~~~~l~~~l~--------~aglp~~  163 (442)
                      ..+.+...+..+.|+||+++| |+++| ...+...+.||++||+||+||++.++.++..+.++++        ++|+|++
T Consensus       102 ~~~~gl~~~~~~~P~GVigiI-~e~~P-~vt~~~~~lalksGNavIlk~~~~a~~s~~~l~~~~~~al~~a~~~aGlP~~  179 (436)
T d1vlua_         102 ELDDGLTLYQVTAPVGVLLVI-FESRP-EVIANITALSIKSGNAAILKGGKESVNTFREMAKIVNDTIAQFQSETGVPVG  179 (436)
T ss_dssp             EEETTEEEEEEEEECCEEEEE-ESSCT-HHHHHHHHHHHHHTCEEEEECCGGGHHHHHHHHHHHHHHHHHHHHHHCCCTT
T ss_pred             eccccceEEEeeeeeeeeecc-ccccc-hhhhhhhhcccccCCcceecCCcccccCHHHHHHHHHHhhhhhccccCCCCc
Confidence            123666778899999999988 66777 6677788899999999999999999999888877664        6699999


Q ss_pred             cEEeecCCccchhhhhcCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCceEEeCCCCHHHHHHHHHHHhhcc
Q psy5844         164 VVNIVPGYGDAGAALVQHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSPNIIFADADLDAAVEGAHFGLFFN  243 (442)
Q Consensus       164 ~~~~v~~~~~~~~~l~~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~~iV~~dad~~~a~~~i~~~~~~~  243 (442)
                      +++++++..++++.|..|+++|.|+||||...++.+.+..    .+|++.++||++|+||++|||++.|++.++.++|.+
T Consensus       180 ~i~~v~~~~~v~~~l~~~~~Id~ii~tGg~~lv~~v~~~~----~~pvi~~~~G~~~~~Vd~~ADl~~A~~~i~~ak~~~  255 (436)
T d1vlua_         180 SVQLIETRQDVSDLLDQDEYIDLVVPRGSNALVRKIKDTT----KIPVLGHADGICSIYLDEDADLIKAKRISLDAKTNY  255 (436)
T ss_dssp             SEEECCCC--CGGGGGCTTTCCEEEEESCHHHHHHHHHTC----CSCBTTBCSCCEEEEECTTCCHHHHHHHHHHTTCC-
T ss_pred             eEEEecchhHHHHHhccCCCCceEEEecCCceeeeeeccc----cceEEEecCCccceeecccccHHHHHHHHHHHhccC
Confidence            9999998668999999999999999999999999988743    369999999999999999999999999999999999


Q ss_pred             CCCcccCCCEEEEcCccHHHHHHHHHHHHhhcccCCCCCCCCccCcCCCHHHHHHHHHHHHHHHhcCCEEEeCCcccCCC
Q psy5844         244 MGQCCCAGSRTFVQDTIYDEFVARSGERAKRRTVGDPFDLNVEQGPQIDKEQMDKILEFIESGKSQGAQLVAGGGRAGDK  323 (442)
Q Consensus       244 ~Gq~C~s~~~v~V~~~~~~~f~~~l~~~~~~~~~g~p~~~~~~~gpl~~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~  323 (442)
                      .|| |++.++++||+++++.|...+....+.   |      ..+.  .+..    +.....+.....      +.   ..
T Consensus       256 ~g~-C~a~e~llV~e~ia~~~~~~~~~~~~~---g------v~l~--~~~~----~~~~~~~~~~~~------~~---~~  310 (436)
T d1vlua_         256 PAG-CNAMETLLINPKFSKWWEVLENLTLEG---G------VTIH--ATKD----LKTAYFDKLNEL------GK---LT  310 (436)
T ss_dssp             ----CCCCEEEEECTTSTTHHHHHHHHHHHH---C------CCBE--ECHH----HHHHHHHHHHHH------TC---CC
T ss_pred             CCc-cccccceeecHhhhhhhhhhHHHHHhC---C------cEEE--eCHH----HHHHhhhhhhhc------cc---cc
Confidence            997 889999999999998886555444432   1      1110  0111    222222211111      11   11


Q ss_pred             CcccccceeccCcchhHHHHHhhcCCcccccccCCHHHHHHHHhcCCCCceEEEecCCCChhhhhccccEeeeEEeeCCH
Q psy5844         324 GFYVQPTVFANVRDDMKIAREEIFGPVQQLIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTLIRFSSI  403 (442)
Q Consensus       324 g~~v~pti~~~~~~~~~~~~~e~fgPvl~v~~~~~~~eai~~an~~~~gl~~~v~s~d~~~~~~~~~~~~~G~V~vN~~~  403 (442)
                      +....|.+......   -+.+|+|+|++.+..+++++|||+++|+.++||+.+|||+|.+.+.+|++++++|.|++|.++
T Consensus       311 ~~~~~~~~~~~~~~---d~~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~vNasT  387 (436)
T d1vlua_         311 EAIQCKTVDADEEQ---DFDKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVYWNAST  387 (436)
T ss_dssp             HHHHTTBC----------------CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEEESSCG
T ss_pred             ccccccccCCCccc---chhhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEEEcCCC
Confidence            22333444322222   257899999999999999999999999999999999999999999999999999999999998


Q ss_pred             HHHHHhhccCCcccee--EEec
Q psy5844         404 EEVIERANNSDYGLAA--AVFT  423 (442)
Q Consensus       404 ~~av~~an~~~yGl~~--~vft  423 (442)
                          ++.++.+|||++  ++-|
T Consensus       388 ----rf~Dg~~~g~g~e~Gist  405 (436)
T d1vlua_         388 ----RFADGFRYGFGAEVGIST  405 (436)
T ss_dssp             ----GGCC--------------
T ss_pred             ----ccCCCCcccCcceeeEec
Confidence                577788999886  4555

>d1bxsa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Sheep (Ovis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=99.06  E-value=2.7e-11  Score=122.06  Aligned_cols=119  Identities=29%  Similarity=0.545  Sum_probs=95.2

Q ss_pred             CCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEEE
Q psy5844         323 KGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAV  377 (442)
Q Consensus       323 ~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v  377 (442)
                      ...+|+..+++++...+....+.           .+||++....++.+++.++.+..              .++.+.++|
T Consensus       300 ~rv~V~~~~~d~f~~~l~~~~~~~~~g~~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~~~~gg~~~~~~g~~~~Ptv  379 (494)
T d1bxsa_         300 SRLFVEESIYDEFVRRSVERAKKYVLGNPLTPGVSQGPQIDKEQYEKILDLIESGKKEGAKLECGGGPWGNKGYFIQPTV  379 (494)
T ss_dssp             CEEEEEHHHHHHHHHHHHHHHTCCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTTCEECSCCSEECSSSCEECCEE
T ss_pred             eEEecccchhHHHHHHHHhhhhheeeeccCCCCCcCCCcCCHHHHHHHHHHHHHHHHcCCEEEeCCCccCCCceeEcCEE
Confidence            34577777777666554433322           26889888888888888876532              244567888


Q ss_pred             ecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         378 FTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       378 ~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +. |....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       380 l~-~~~~~~~~~~~E~FGPvl~v~~~~~~~eai~~~n~~~~gL~a~i~t~d~~~~~~~~~~l~~G~v~  446 (494)
T d1bxsa_         380 FS-DVTDDMRIAKEEIFGPVQQIMKFKSLDDVIKRANNTFYGLSAGIFTNDIDKAITVSSALQSGTVW  446 (494)
T ss_dssp             EE-SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCCSEEE
T ss_pred             Ee-CCCCCcHHHhccccCceEEEEEECCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCEeEEE
Confidence            87 67778899999999975   778999999999999999999999999999999999999999985

>d1o04a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Human (Homo sapiens), mitochondrial [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Human (Homo sapiens), mitochondrial [TaxId: 9606]

Probab=98.99  E-value=9.4e-11  Score=118.00  Aligned_cols=118  Identities=38%  Similarity=0.605  Sum_probs=94.8

Q ss_pred             CcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc--------------CCCCceEEEe
Q psy5844         324 GFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN--------------SDYGLAAAVF  378 (442)
Q Consensus       324 g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~--------------~~~gl~~~v~  378 (442)
                      ..+|++.+++++...+....+.           .+||++....++.+.+.++.+..              .++.+.++|+
T Consensus       301 ~v~v~~~i~d~f~~~l~~~~~~~~~g~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~vl~gg~~~~~~g~~~~Ptvl  380 (494)
T d1o04a_         301 RTFVQEDIYDEFVERSVARAKSRVVGNPFDSKTEQGPQVDETQFKKILGYINTGKQEGAKLLCGGGIAADRGYFIQPTVF  380 (494)
T ss_dssp             EEEEEHHHHHHHHHHHHHHHHHCCBCCTTSTTCSBCCCSSHHHHHHHHHHHHHHHHTTCEEEECCSBCCSSSSCBCCEEE
T ss_pred             cccccchhhHHHHHHHHHHhhheeecCcccccCccCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCcCCCCCceEcCEEE
Confidence            4577777777766655443333           25888888888888877776522              2355688998


Q ss_pred             cCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         379 TKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       379 s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      . +....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|.+++.+++++|++|+||
T Consensus       381 ~-~~~~~~~~~~eE~FGPvl~v~~~~~~~eai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~  446 (494)
T d1o04a_         381 G-DVQDGMTIAKEEIFGPVMQILKFKTIEEVVGRANNSTYGLAAAVFTKDLDKANYLSQALQAGTVW  446 (494)
T ss_dssp             E-SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred             e-CCCCCCHHHhccccCceEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCeeEEE
Confidence            7 66777899999999975   668999999999999999999999999999999999999999985

>d1uzba_ c.82.1.1 (A:) 1-pyrroline-5-carboxylate dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: 1-pyrroline-5-carboxylate dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=98.98  E-value=9.3e-11  Score=118.68  Aligned_cols=118  Identities=22%  Similarity=0.392  Sum_probs=94.8

Q ss_pred             CcccccceeccCcchhHHHHHh----------hcCCcccccccCCHHHHHHHHhc-------------CCCCceEEEecC
Q psy5844         324 GFYVQPTVFANVRDDMKIAREE----------IFGPVQQLIRFSSIEEVIERANN-------------SDYGLAAAVFTK  380 (442)
Q Consensus       324 g~~v~pti~~~~~~~~~~~~~e----------~fgPvl~v~~~~~~~eai~~an~-------------~~~gl~~~v~s~  380 (442)
                      ..+|++.+++++...+....+.          .+||++....++.+++.++.+.+             .++.+.++|++ 
T Consensus       327 ri~v~~~i~d~~~~~~~~~~~~l~~g~~~~~~~~gpli~~~~~~~~~~~i~~a~~~Ga~v~~g~~~~~~g~~~~Ptvl~-  405 (516)
T d1uzba_         327 RLILTQGAYEPVLERVLKRAERLSVGPAEENPDLGPVVSAEQERKVLSYIEIGKNEGQLVLGGKRLEGEGYFIAPTVFT-  405 (516)
T ss_dssp             EEEEEHHHHHHHHHHHHHHHTTCCBSCGGGCCSBCCCSCHHHHHHHHHHHHHHTTTSEEEECCSBCSSSSCCBCCEEEE-
T ss_pred             ccccccccccchhhHHHHHHHhcccCCCcccCccccccCHHHHHHHHHHHHHHHHCCCEEECCCcCCCCCceECCEEEe-
Confidence            3567777776665544333222          26888888888888888887632             35667889998 


Q ss_pred             CCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         381 DLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       381 d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+..+.+++++.||+|   +..++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       406 ~v~~~~~~~~eE~FGPvl~v~~~~d~eeai~~an~~~~gL~a~i~s~d~~~~~~~~~~l~~G~v~  470 (516)
T d1uzba_         406 EVPPKARIAQEEIFGPVLSVIRVKDFAEALEVANDTPYGLTGGVYSRKREHLEWARREFHVGNLY  470 (516)
T ss_dssp             SCCTTSGGGTSCCCSSEEEEEEESSHHHHHHHHHCSSCCSEEEEECSCHHHHHHHHHHSCCSEEE
T ss_pred             cCCCCchhhcCCCcCceEEEEEeCCHHHHHHHHHCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEE
Confidence            66678899999999975   668899999999999999999999999999999999999999985

>d1wnda_ c.82.1.1 (A:) Putative betaine aldehyde dehydrogenase YdcW {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Putative betaine aldehyde dehydrogenase YdcW
species: Escherichia coli [TaxId: 562]

Probab=98.98  E-value=1e-10  Score=117.20  Aligned_cols=125  Identities=24%  Similarity=0.443  Sum_probs=99.8

Q ss_pred             CcccCCCCcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhc---------------CC
Q psy5844         317 GGRAGDKGFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANN---------------SD  370 (442)
Q Consensus       317 g~~~~~~g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~---------------~~  370 (442)
                      ..+......+|+..+++++...+....+.           .+||++....+++....++.+..               .+
T Consensus       278 Q~C~a~~rv~V~~~i~d~~~~~l~~~~~~l~~G~~~~~~~~~Gpli~~~~~~~~~~~i~~a~~~ga~~v~~G~~~~~~~g  357 (474)
T d1wnda_         278 QDCTAACRIYAQKGIYDTLVEKLGAAVATLKSGAPDDESTELGPLSSLAHLERVGKAVEEAKATGHIKVITGGEKRKGNG  357 (474)
T ss_dssp             CSTTCCCEEEEETTTHHHHHHHHHHHHHTCCBCCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHTSSCEEEECCSBCSSSS
T ss_pred             cccccccccccccccchhhhhhhHHHHHhhccCCcCCCCceecccccccccchHHHHHHHHHHCCCeEEEeCCcccCCCc
Confidence            33434455688888888877665544332           37889888888888888877632               23


Q ss_pred             CCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         371 YGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       371 ~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      +.+.++|+. +....+.+++++.||+|   +..++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       358 ~~~~Ptil~-~~~~~~~~~~eE~FGPVl~v~~~~~~deai~~an~~~~GL~a~i~t~d~~~~~~~~~~l~~g~v~  431 (474)
T d1wnda_         358 YYYAPTLLA-GALQDDAIVQKEVFGPVVSVTPFDNEEQVVNWANDSQYGLASSVWTKDVGRAHRVSARLQYGCTW  431 (474)
T ss_dssp             CCBCCEEEE-CCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHSSSCCSEEEEECSBHHHHHHHHHHCCSSEEE
T ss_pred             eEEeeeEee-cccccccceeecccCCeEEEEEeCCHHHHHHHHhCCCCCCeEEEEeCCHHHHHHHHHhCCccEEE
Confidence            456788887 66677899999999965   778999999999999999999999999999999999999999986

>d1a4sa_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Baltic cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Baltic cod (Gadus callarias) [TaxId: 8053]

Probab=98.96  E-value=2.2e-10  Score=115.49  Aligned_cols=126  Identities=23%  Similarity=0.419  Sum_probs=100.0

Q ss_pred             CCcccCCCCcccccceeccCcchhHHHHHhh-----------cCCcccccccCCHHHHHHHHhc----------------
Q psy5844         316 GGGRAGDKGFYVQPTVFANVRDDMKIAREEI-----------FGPVQQLIRFSSIEEVIERANN----------------  368 (442)
Q Consensus       316 gg~~~~~~g~~v~pti~~~~~~~~~~~~~e~-----------fgPvl~v~~~~~~~eai~~an~----------------  368 (442)
                      |..+......+++..+++++...+....+.+           +||++.-..++.+++.++.+..                
T Consensus       294 GQ~C~a~~ri~v~~~~~~~~~~~l~~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~Ga~v~~gg~~~~~~~  373 (503)
T d1a4sa_         294 GQVCTNGTRVFVQREIMPQFLEEVVKRTKAIVVGDPLLTETRMGGLISKPQLDKVLGFVAQAKKEGARVLCGGEPLTPSD  373 (503)
T ss_dssp             GCCTTCCCEEEEEGGGHHHHHHHHHHHHHTCCBSCTTSTTCCBCCCSCHHHHHHHHHHHHHHHHHTCEEEECCSBCCCSS
T ss_pred             CCccccCcceEEEechhhhHHHHHHHhhhhEeeccccccccccccccCHHHHHHHHHHHHHHHHcCCEEEECCcccCCCC
Confidence            3334344556888888877766554444332           6888888888888888877621                


Q ss_pred             ----CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHcccccccc
Q psy5844         369 ----SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTV  441 (442)
Q Consensus       369 ----~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v  441 (442)
                          .++.+.++|++ |.+..+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+|
T Consensus       374 ~~~~~G~~~~Ptvl~-~~~~~~~~~~~E~FgPvl~v~~~~~~~eai~~an~~~~gL~~~i~t~d~~~~~~~~~~l~~G~v  452 (503)
T d1a4sa_         374 PKLKNGYFMSPCVLD-NCRDDMTCVKEEIFGPVMSVLPFDTEEEVLQRANNTTFGLASGVFTRDISRAHRVAANLEAGTC  452 (503)
T ss_dssp             GGGTTSCCBCCEEEE-SCCTTSHHHHSCCCSSEEEEEEECCHHHHHHHHHCSSCCSEEEEECSBHHHHHHHHHHSCSSEE
T ss_pred             cccCCceEEcCEEEe-CCCCCCHHHhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCeeEE
Confidence                23457889998 66778899999999975   77899999999999999999999999999999999999999998


Q ss_pred             C
Q psy5844         442 W  442 (442)
Q Consensus       442 ~  442 (442)
                      |
T Consensus       453 ~  453 (503)
T d1a4sa_         453 Y  453 (503)
T ss_dssp             E
T ss_pred             E
Confidence            5

>d1ad3a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.93  E-value=1.9e-10  Score=114.16  Aligned_cols=120  Identities=19%  Similarity=0.292  Sum_probs=92.9

Q ss_pred             CCCcccccceeccCcchhHHHHHhh----------cCCcccccccCCHHHHHHHHh--------cCCCCceEEEecCCCC
Q psy5844         322 DKGFYVQPTVFANVRDDMKIAREEI----------FGPVQQLIRFSSIEEVIERAN--------NSDYGLAAAVFTKDLD  383 (442)
Q Consensus       322 ~~g~~v~pti~~~~~~~~~~~~~e~----------fgPvl~v~~~~~~~eai~~an--------~~~~gl~~~v~s~d~~  383 (442)
                      .+..+++..+++++...+....+++          +||++.-..++.....++.+.        ..++.+.++|++ |.+
T Consensus       245 ~~rv~v~~~i~~~f~~~l~~~~~~~~g~~~~~~~~~gp~i~~~~~~~~~~~~~~a~~~~g~~~~~~~~~~~Ptil~-~v~  323 (446)
T d1ad3a_         245 PDYILCDPSIQNQIVEKLKKSLKDFYGEDAKQSRDYGRIINDRHFQRVKGLIDNQKVAHGGTWDQSSRYIAPTILV-DVD  323 (446)
T ss_dssp             CCEEEECGGGHHHHHHHHHHHHHHHHCSCGGGCTTSCCCSCHHHHHHHHHTTTTSCEEECCCEETTTTEECCEEEC-SCC
T ss_pred             CCccccccchhHHHHHhhhhhhheeecccccccccccchhhhhhhhhhhccccchhcccceeecCCCCCcCCEEEE-CCC
Confidence            3456888888888776665444443          567776555555544444331        233456778887 777


Q ss_pred             hhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         384 KTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       384 ~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ..+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|..++.++++++++|+||
T Consensus       324 ~~~~~~~eE~FgPVl~v~~~~~~~eai~~~n~~~~gl~a~v~t~d~~~a~~~~~~l~~G~v~  385 (446)
T d1ad3a_         324 PQSPVMQEEIFGPVMPIVCVRSLEEAIQFINQREKPLALYVFSNNEKVIKKMIAETSSGGVT  385 (446)
T ss_dssp             TTSGGGTSCCCSSEECEEECSSHHHHHHHHHTSCCCSEEEEECSCHHHHHHHHTTCCCSEEE
T ss_pred             CCCHHHhCcccCcceEEEEeccHHHHHHHHhCCCCCCEEEEEcCCHHHHHHHHHhCCEeEEE
Confidence            88999999999975   778999999999999999999999999999999999999999985

>d1ky8a_ c.82.1.1 (A:) Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN {Archaeon Thermoproteus tenax [TaxId: 2271]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Non-phosphorylating glyceraldehyde-3-phosphate dehydrogenase GapN
species: Archaeon Thermoproteus tenax [TaxId: 2271]

Probab=98.60  E-value=4.4e-09  Score=105.70  Aligned_cols=119  Identities=19%  Similarity=0.273  Sum_probs=89.6

Q ss_pred             CcccccceeccCcchhHHHHHh-----------hcCCcccccccCCHHHHHHHHhcCCCC------------ceEEEecC
Q psy5844         324 GFYVQPTVFANVRDDMKIAREE-----------IFGPVQQLIRFSSIEEVIERANNSDYG------------LAAAVFTK  380 (442)
Q Consensus       324 g~~v~pti~~~~~~~~~~~~~e-----------~fgPvl~v~~~~~~~eai~~an~~~~g------------l~~~v~s~  380 (442)
                      ..+||..+++++...+....+.           .+||++....++.+.+.++.+...+.-            ....+++.
T Consensus       300 ~v~V~~~v~d~f~~~l~~~~~~l~~G~p~~~~~~~gpli~~~~~~~~~~~i~~a~~~ga~v~~~~~~~~~~~~~~~~~~~  379 (499)
T d1ky8a_         300 LVLAERPVYGKLVEEVAKRLSSLRVGDPRDPTVDVGPLISPSAVDEMMAAIEDAVEKGGRVLAGGRRLGPTYVQPTLVEA  379 (499)
T ss_dssp             EEEEEHHHHHHHHHHHHHHHHTCCBSCTTSTTCSBCCCSCHHHHHHHHHHHHHHHHTTCEEEECCCEEETTEECCEEEEC
T ss_pred             cccccchhHHHHHHHHHHHHHhCccCCCCCccccccccchHHHHHHHHHHHHHHHHcCCEEeeeeccccccccccccccc
Confidence            3577777777777666554444           378999988888888888877543211            11122221


Q ss_pred             --CCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         381 --DLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       381 --d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                        +....+.+++++.||+|   +.+++.+|+++.+|+++|||++||||+|..++.++++++++|+||
T Consensus       380 ~~~~~~d~~~~~eE~FGPvl~v~~~~~~~eai~~~n~~~~gLt~sv~s~d~~~~~~~~~~l~~G~v~  446 (499)
T d1ky8a_         380 PADRVKDMVLYKREVFAPVASAVEVKDLDQAIELANGRPYGLDAAVFGRDVVKIRRAVRLLEVGAIY  446 (499)
T ss_dssp             CHHHHTTSHHHHSCCCSSEEEEEEESSHHHHHHHHHTSSEESEEEEECCCHHHHHHHHHHCCSSEEE
T ss_pred             cccCCCCChhhhccccCceEEEEEcCCHHHHHHHHhCCCCCCeEEEEcCCHHHHHHHHHhCCEeEEE
Confidence              12245678889999965   778999999999999999999999999999999999999999985

>d1euha_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Streptococcus mutans [TaxId: 1309]

Probab=98.46  E-value=3.4e-08  Score=98.50  Aligned_cols=73  Identities=30%  Similarity=0.469  Sum_probs=64.3

Q ss_pred             CCCCceEEEecCCCChhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         369 SDYGLAAAVFTKDLDKTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       369 ~~~gl~~~v~s~d~~~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++.+.++++. +....+.+++++.||+|   +.+++.+|+++.+|+++|||+++|||+|.+.+.++++++++|+|+
T Consensus       354 ~g~~~~Ptvl~-~~~~~~~~~~eE~fgPvl~v~~~~~~deai~~~n~~~~glta~v~s~d~~~~~~~~~~l~~g~v~  429 (474)
T d1euha_         354 EGNLICPILFD-KVTTDMRLAWEEPFGPVLPIIRVTSVEEAIEISNKSEYGLQASIFTNDFPRAFGIAEQLEVGTVH  429 (474)
T ss_dssp             ETTEECCEEEE-SCCTTSGGGTSCCCSSEEEEEEESCHHHHHHHHHHSSEESEEEEECSCHHHHHHHHHHSCSSEEE
T ss_pred             CCCCcCCEEEe-cCCCcchhhhcccCCcEEEEEEeCCHHHHHHHHHCCCCCCeEEEEeCCHHHHHHHHHhCCEEEEE
Confidence            35567788886 55677888999889964   678999999999999999999999999999999999999999985

>d1o20a_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=98.16  E-value=3.6e-07  Score=89.19  Aligned_cols=56  Identities=13%  Similarity=0.175  Sum_probs=50.9

Q ss_pred             hhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         387 YVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       387 ~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      ...+++.||+|   +..++.+|||+.+|+++|||++||||+|..++.+++++|++|+||
T Consensus       304 ~~~~~E~FgPvl~v~~~~~~dEAI~~aN~~~yGLsa~I~T~d~~~a~~~~~~i~~G~V~  362 (414)
T d1o20a_         304 DDWPTEYLDLIIAIKVVKNVDEAIEHIKKYSTGHSESILTENYSNAKKFVSEIDAAAVY  362 (414)
T ss_dssp             GGTTCCCCSSEEEEEEESSHHHHHHHHHHHCCSSEEEEECSCHHHHHHHHHHCCSSEEE
T ss_pred             ccCCceeeeeEEEEEEeCCHHHHHHHHhcCCCCCcEEEEeCCHHHHHHHHHhCCeeEEE
Confidence            34567888965   778999999999999999999999999999999999999999985

>d1ez0a_ c.82.1.1 (A:) Aldehyde reductase (dehydrogenase), ALDH {Vibrio harveyi [TaxId: 669]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Aldehyde reductase (dehydrogenase), ALDH
species: Vibrio harveyi [TaxId: 669]

Probab=97.59  E-value=1.2e-05  Score=80.19  Aligned_cols=59  Identities=12%  Similarity=0.159  Sum_probs=51.6

Q ss_pred             hhhhhccccEeeeE---EeeCCHHHHHHhhccCCccceeEEecc--ChhHHHHHHcccc--ccccC
Q psy5844         384 KTNYVTQGLRAGTL---IRFSSIEEVIERANNSDYGLAAAVFTK--DLDKTNYVTQGLR--AGTVW  442 (442)
Q Consensus       384 ~~~~~~~~~~~G~V---~vN~~~~~av~~an~~~yGl~~~vft~--d~~~~~~~~~~l~--~G~v~  442 (442)
                      ..+.+++++.||+|   +.+++.+|+++++|+++|||++||||+  |..++.+++++||  +|+||
T Consensus       365 ~~~~~~~eE~FGPvl~i~~~~~~~eai~~an~~~~gL~a~I~t~d~d~~~a~~~~~~l~~~aG~v~  430 (504)
T d1ez0a_         365 RKHPAWEEEIFGPQSLIVVCENVADMLSLSEMLAGSLTATIHATEEDYPQVSQLIPRLEEIAGRLV  430 (504)
T ss_dssp             HHCGGGGSCCCSSEEEEEEESSHHHHHHHHHTCCCEEEEEEECCGGGHHHHHHHHHHHHTTEEEEE
T ss_pred             ccchhhcccccCCeeeeeecCCHHHHHHHHHCCCCCceEEEEecchhHHHHHHHHHHHhCCccEEE
Confidence            45668999999975   678999999999999999999999996  5568999999997  79874

>d1vlua_ c.82.1.1 (A:) Gamma-glutamyl phosphate reductase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: ALDH-like
domain: Gamma-glutamyl phosphate reductase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.95  E-value=0.00027  Score=68.48  Aligned_cols=53  Identities=15%  Similarity=0.154  Sum_probs=45.2

Q ss_pred             cccEeee---EEeeCCHHHHHHhhccCCccceeEEeccChhHHHHHHccccccccC
Q psy5844         390 QGLRAGT---LIRFSSIEEVIERANNSDYGLAAAVFTKDLDKTNYVTQGLRAGTVW  442 (442)
Q Consensus       390 ~~~~~G~---V~vN~~~~~av~~an~~~yGl~~~vft~d~~~~~~~~~~l~~G~v~  442 (442)
                      .++.+++   |++.++.+||++.+|..+||+++++||+|...+.+|++++++|.|+
T Consensus       327 ~~E~l~pvl~v~~v~~~eEAI~~in~~g~ghta~I~T~d~~~a~~F~~~vda~~V~  382 (436)
T d1vlua_         327 DKEFLSLDLAAKFVTSTESAIQHINTHSSRHTDAIVTENKANAEKFMKGVDSSGVY  382 (436)
T ss_dssp             -----CCCCEEEECCSHHHHHHHHTTSCSSCEEEEECSCHHHHHHHHHHCCCSEEE
T ss_pred             hhhhhCcceeEEEECCHHHHHHHHHHhCCCCceEEEECCHHHHHHHHHhCCceEEE
Confidence            3455553   6889999999999999999999999999999999999999999985

>d1k75a_ c.82.1.2 (A:) L-histidinol dehydrogenase HisD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: ALDH-like
superfamily: ALDH-like
family: L-histidinol dehydrogenase HisD
domain: L-histidinol dehydrogenase HisD
species: Escherichia coli [TaxId: 562]

Probab=80.82  E-value=21  Score=32.69  Aligned_cols=165  Identities=18%  Similarity=0.103  Sum_probs=97.6

Q ss_pred             CCcceEEEeeccceEEEecccc---cchHHHHhhhhhhhccCCeEEe--cCCCCChHHHHHHHHHHHHhCCCCCcEEeec
Q psy5844          95 GDFFAYTRHEPVGVCGQIIPWN---FPLLMLAWKIAPALATGNTIVL--KPAEQTPLTALAVGALIAEAGIPEGVVNIVP  169 (442)
Q Consensus        95 ~~~~~~~~~~P~Gvv~~i~p~n---~P~~~~~~~~~~aL~~Gn~vv~--kps~~~~~~~~~l~~~l~~aglp~~~~~~v~  169 (442)
                      .|.....++.|+--|++..|.-   || ++++...+||-.+|+.=|+  -|+...|.    +.-+.+.+|+..    +..
T Consensus       110 ~Gv~~g~~~~PI~~VGlYVPGG~A~yp-SsvLM~aiPAkvAGV~~Ivv~tPp~~~~~----~l~aa~~~Gv~~----iy~  180 (431)
T d1k75a_         110 PGVRCQQVTRPVASVGLYIPGGSAPLF-STVLMLATPASIAGCKKVVLCSPPPIADE----ILYAAQLCGVQD----VFN  180 (431)
T ss_dssp             TTEEEEEEEEECSEEEEECCCSSSCCH-HHHHHHHHHHHHHTCSEEEEEECSSCCHH----HHHHHHHTTCCE----EEE
T ss_pred             CCceeeeeeeehhhheeeccCCCccch-HHHHHHHHHHHhcCCCceeEEeCCCCcch----HHHHHHHcCccc----eEe
Confidence            5666788899999999999976   55 4566678899999987654  45444443    223445566653    333


Q ss_pred             CCc-cchhhhh----cCCCccEEeecCCHHHHHHHHhhccCCCCceeeeecCCCCc--eEEeCCCCHHHHHHHHHHHhhc
Q psy5844         170 GYG-DAGAALV----QHPGVDKVAFTGSTEVGKLVQQGSGASNLKRTTLELGGKSP--NIIFADADLDAAVEGAHFGLFF  242 (442)
Q Consensus       170 ~~~-~~~~~l~----~~~~v~~v~ftGs~~~~~~i~~~~~~~~~~~~~~e~gG~~~--~iV~~dad~~~a~~~i~~~~~~  242 (442)
                      -.| +...+|.    .-|.||.|+=.|+.-+..+=++..+.-...-+=+- .|.+=  +|-++++|.+.++..++.-+=+
T Consensus       181 ~GGaqAIAAlAyGT~ti~~VdkI~GPGN~yV~~AK~~v~g~~~~vgID~~-aGPSEv~viAD~~a~p~~iAaDllaQAEH  259 (431)
T d1k75a_         181 VGGAQAIAALAFGTESVPKVDKIFGPGNAFVTEAKRQVSQRLDGAAIDMP-AGPSEVLVIADSGATPDFVASDLLSQAEH  259 (431)
T ss_dssp             CCHHHHHHHHHHCCSSSCCCSEEECCCSHHHHHHHHHHHHSTTSCEESCC-CCCCEEEEEECTTSCHHHHHHHHHHHHTT
T ss_pred             cCChHHHHHHhhccCcccccceeecCCchhhhhhHHhhcccCCccccccc-cCCceEEEEecCCCCHHHHHHHHHhccCC
Confidence            234 4444443    35789999999998765543332221000111112 34443  3345568999999888776654


Q ss_pred             cCCCcccCCCEEEEcCc--cHHHHHHHHHHHHhh
Q psy5844         243 NMGQCCCAGSRTFVQDT--IYDEFVARSGERAKR  274 (442)
Q Consensus       243 ~~Gq~C~s~~~v~V~~~--~~~~f~~~l~~~~~~  274 (442)
                      ...     .+-++|..+  ..+++.+.+.+.++.
T Consensus       260 ~~~-----a~~ilvt~~~~l~~~v~~~i~~~l~~  288 (431)
T d1k75a_         260 GPD-----SQVILLTPAADMARRVAEAVERQLAE  288 (431)
T ss_dssp             CTT-----CEEEEEESCHHHHHHHHHHHHHHHHT
T ss_pred             ccc-----ceeEEEeccHHHHHHHHHHHHHHhhh
Confidence            443     344677665  334444445544443