Psyllid ID: psy605

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------35
MSGIGVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDEAIEKWRNSRTRADNTSVVTLLIDPPGPPPRPKRFDRGNCNCYGLIVPSY
cccccccEEEEEEEccccccccccEEEEEcccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccEEEEEEEEccEEEEEEcccccEEEEcccccccccEEEEcccccccccHHHHHHHHHcccEEEEEccccEEEcccccccccccccccccccccccEEHHHccccccccccccccccEEEcccEEEEEEcccccEEEEEEcccccccccHHHHHHHHHHcccccHHHHHHHccccHHHHHHHHHHHHHHHHcccccccccEEEEEEEccccccccccccccccccccccccccc
cccccccEEEEEEccccccccccccEEEEcccccccccccEEEEEEEccccHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccEEEEEEEEccEEEEEEcccccEEEEEEcccccccEEEEcccccccccHHHHHHHHHcccEEEEEcccccEccccccccccccEEccccHcHHHHHHHHHHHccHHccccccccEEEcccccEEEEEccccccEEEEEEcccccccccHHHHHHHHHHHHHHcccccccccccHHHHHHHHHHHHHHHHHHHccccccEEEEEEEEccccccccHHHHHHHcccccccccccc
MSGIGVNLRVTGHCNQGGRKYMEDMFSVAYQQtedfndleYAFFgifdghggvEAATYAKEHLLDSIVQqksfwsdnddDVLHAIHEGYINTHQAMWKDQanwqrtqsglpstsgttATVAFIMKSKIYVGHVGDSMLVlgyqdendkswkcleltkehkpecpeEIKRITKAGgkvvrkngvprvvwnrpkighkgpvrrstafdeipFLAVARSLGdfwsynseldtfvvspepdvgviemdTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEqtemaqsnnwinpskcLVDEAIEKWRnsrtradntsVVTLlidppgppprpkrfdrgncncyglivpsy
msgigvnlrvtghcnqgGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELtkehkpecpeeikritkaggkvvrkngvprvvwnrpkighkgpvrrstafdEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQtemaqsnnwinpsKCLVDEAIEKWRnsrtradntsvvtllidppgppprpkrfdrgncNCYGLIVPSY
MSGIGVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDEAIEKWRNSRTRADNTSVVTLLIDppgppprpKRFDRGNCNCYGLIVPSY
****GVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRT*******SGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKE*******EIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDEAIEKWRN********SVVTLL****************************
*****VNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQR***GLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEV*************INPSKCLVDEAIEKWRNSRTRADNTSVVTLLI********************GLIVP**
MSGIGVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDEAIEKWRNSRTRADNTSVVTLLIDPPGPPPRPKRFDRGNCNCYGLIVPSY
*****VNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDEAIEKWRNSRTRADNTSVVTLLIDPPGPPPRPKRFDRGNC**Y*LI****
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ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
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MSGIGVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDEAIEKWRNSRTRADNTSVVTLLIDPPGPPPRPKRFDRGNCNCYGLIVPSY
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query348 2.2.26 [Sep-21-2011]
Q9QZ67 598 Protein phosphatase 1D OS yes N/A 0.795 0.463 0.507 1e-75
O15297 605 Protein phosphatase 1D OS yes N/A 0.798 0.459 0.498 1e-75
Q9SD02361 Probable protein phosphat yes N/A 0.781 0.753 0.305 1e-30
P93006380 Probable protein phosphat no N/A 0.735 0.673 0.293 4e-24
Q6L5C4491 Probable protein phosphat yes N/A 0.669 0.474 0.311 5e-23
Q8VZN9371 Probable protein phosphat no N/A 0.594 0.557 0.315 6e-23
Q69VD9367 Probable protein phosphat no N/A 0.772 0.732 0.289 8e-23
Q94AT1420 Probable protein phosphat no N/A 0.709 0.588 0.298 1e-22
Q0JL75377 Probable protein phosphat no N/A 0.606 0.559 0.334 6e-22
Q652Z7378 Probable protein phosphat no N/A 0.672 0.619 0.293 1e-21
>sp|Q9QZ67|PPM1D_MOUSE Protein phosphatase 1D OS=Mus musculus GN=Ppm1d PE=2 SV=2 Back     alignment and function desciption
 Score =  283 bits (725), Expect = 1e-75,   Method: Compositional matrix adjust.
 Identities = 144/284 (50%), Positives = 185/284 (65%), Gaps = 7/284 (2%)

Query: 42  AFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQA 101
           AFF + DGHGG EAA +A+EHL   I +QK F S     V  AI +G++  H AMWK  A
Sbjct: 92  AFFAVCDGHGGREAAQFAREHLWGFIKKQKGFTSSEPAKVCAAIRKGFLACHLAMWKKLA 151

Query: 102 NWQRTQSGLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDE-NDKSWKCLELTKEHK 160
            W +T +GLPSTSGTTA+V  I   K+YV HVGDS +VLG QD+  D   + +E+T++HK
Sbjct: 152 EWPKTMTGLPSTSGTTASVVIIRGMKMYVAHVGDSGVVLGIQDDPKDDFVRAVEVTQDHK 211

Query: 161 PECPEEIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDF 220
           PE P+E +RI   GG V+ K+GV RVVW RP++ H GPVRRST  D+IPFLAVAR+LGD 
Sbjct: 212 PELPKERERIEGLGGSVMNKSGVNRVVWKRPRLTHSGPVRRSTVIDQIPFLAVARALGDL 271

Query: 221 WSYNSELDTFVVSPEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNE- 279
           WSY+     FVVSPEPD  V  +D  +HK +I G+DGLWNM+  QDA+ +    E +   
Sbjct: 272 WSYDFFSGKFVVSPEPDTSVHTLDPRKHKYIILGSDGLWNMVPPQDAISMCQDQEEKKYL 331

Query: 280 QTEMAQSNNWINPSKCLVDEAIEKWRNSRTRADNTSVVTLLIDP 323
             E  QS      +K LV+ A+ +WR    RADNTS + + I P
Sbjct: 332 MGEQGQSC-----AKMLVNRALGRWRQRMLRADNTSAIVICISP 370
Required for the relief of p53-dependent checkpoint mediated cell cycle arrest. Binds to and dephosphorylates 'Ser-18' of TP53 and 'Ser-345' of CHEK1 which contributes to the functional inactivation of these proteins.
Mus musculus (taxid: 10090)
EC: 3EC: .EC: 1EC: .EC: 3EC: .EC: 1EC: 6
>sp|O15297|PPM1D_HUMAN Protein phosphatase 1D OS=Homo sapiens GN=PPM1D PE=1 SV=1 Back     alignment and function description
>sp|Q9SD02|P2C47_ARATH Probable protein phosphatase 2C 47 OS=Arabidopsis thaliana GN=At3g51470 PE=1 SV=1 Back     alignment and function description
>sp|P93006|P2C27_ARATH Probable protein phosphatase 2C 27 OS=Arabidopsis thaliana GN=At2g33700 PE=2 SV=1 Back     alignment and function description
>sp|Q6L5C4|P2C52_ORYSJ Probable protein phosphatase 2C 52 OS=Oryza sativa subsp. japonica GN=Os05g0587100 PE=2 SV=1 Back     alignment and function description
>sp|Q8VZN9|P2C11_ARATH Probable protein phosphatase 2C 11 OS=Arabidopsis thaliana GN=At1g43900 PE=2 SV=1 Back     alignment and function description
>sp|Q69VD9|P2C57_ORYSJ Probable protein phosphatase 2C 57 OS=Oryza sativa subsp. japonica GN=Os06g0597200 PE=2 SV=1 Back     alignment and function description
>sp|Q94AT1|P2C76_ARATH Probable protein phosphatase 2C 76 OS=Arabidopsis thaliana GN=At5g53140 PE=2 SV=1 Back     alignment and function description
>sp|Q0JL75|P2C07_ORYSJ Probable protein phosphatase 2C 7 OS=Oryza sativa subsp. japonica GN=Os01g0618200 PE=2 SV=2 Back     alignment and function description
>sp|Q652Z7|P2C55_ORYSJ Probable protein phosphatase 2C 55 OS=Oryza sativa subsp. japonica GN=Os06g0526700 PE=2 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
307190015 946 Protein phosphatase 1D [Camponotus flori 0.931 0.342 0.701 1e-138
380020462 882 PREDICTED: uncharacterized protein LOC10 0.931 0.367 0.691 1e-137
328788679 884 PREDICTED: hypothetical protein LOC41265 0.931 0.366 0.691 1e-137
322790476 949 hypothetical protein SINV_02654 [Solenop 0.928 0.340 0.694 1e-137
332024749 948 Protein phosphatase 1D [Acromyrmex echin 0.931 0.341 0.693 1e-137
328716050 578 PREDICTED: protein phosphatase 1D-like [ 0.939 0.565 0.691 1e-135
383854000 888 PREDICTED: uncharacterized protein LOC10 0.931 0.364 0.691 1e-134
91084661371 PREDICTED: similar to protein phosphatas 0.936 0.878 0.667 1e-134
350418285 926 PREDICTED: hypothetical protein LOC10074 0.931 0.349 0.691 1e-133
340726617 887 PREDICTED: hypothetical protein LOC10064 0.931 0.365 0.691 1e-133
>gi|307190015|gb|EFN74235.1| Protein phosphatase 1D [Camponotus floridanus] Back     alignment and taxonomy information
 Score =  496 bits (1276), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 233/332 (70%), Positives = 269/332 (81%), Gaps = 8/332 (2%)

Query: 3   GIGVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEH 62
            IGVNLRVTGHCNQGGRKYMEDMF VA+Q T D  DLEYAFFGIFDGHGG EAAT+AKEH
Sbjct: 4   SIGVNLRVTGHCNQGGRKYMEDMFCVAFQPTPDDKDLEYAFFGIFDGHGGGEAATFAKEH 63

Query: 63  LLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVAF 122
           L+DSIV+QK+FWSD D+DVL AI +GY+NTH AMW++   W RT SGLPST+GTTA++AF
Sbjct: 64  LMDSIVKQKNFWSDRDEDVLRAIRDGYMNTHYAMWRELDKWPRTASGLPSTAGTTASIAF 123

Query: 123 IMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVVRKNG 182
           I K KIY+GHVGDS ++LGYQ E D  W+   LTK+HKPE   E+ RI ++GGKVV K+G
Sbjct: 124 IRKGKIYIGHVGDSAIILGYQMEGDPQWRAKALTKDHKPESGPEMTRIQESGGKVVSKSG 183

Query: 183 VPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGVIE 242
           VPRVVWNRP+IGHKGPVRRST  DEIPFLAVARSLGD WSYNSEL+TFVVSPEPDV VI 
Sbjct: 184 VPRVVWNRPRIGHKGPVRRSTHMDEIPFLAVARSLGDLWSYNSELNTFVVSPEPDVKVIP 243

Query: 243 MDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMA--QSNN------WINPSK 294
           +D   H+CLIFGTDGLWNMLS Q AV IV  T+  NE+  +A  Q+ N      WINPSK
Sbjct: 244 VDVKSHRCLIFGTDGLWNMLSPQAAVAIVQATDRHNEKHLIASQQTGNGADLQMWINPSK 303

Query: 295 CLVDEAIEKWRNSRTRADNTSVVTLLIDPPGP 326
            LVD A+E+W ++R RADNTSVVTL++DP GP
Sbjct: 304 SLVDRALERWSSTRLRADNTSVVTLMLDPSGP 335

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota
>gi|380020462|ref|XP_003694102.1| PREDICTED: uncharacterized protein LOC100864193 [Apis florea] Back     alignment and taxonomy information
>gi|328788679|ref|XP_396110.3| PREDICTED: hypothetical protein LOC412655 [Apis mellifera] Back     alignment and taxonomy information
>gi|322790476|gb|EFZ15354.1| hypothetical protein SINV_02654 [Solenopsis invicta] Back     alignment and taxonomy information
>gi|332024749|gb|EGI64938.1| Protein phosphatase 1D [Acromyrmex echinatior] Back     alignment and taxonomy information
>gi|328716050|ref|XP_001948678.2| PREDICTED: protein phosphatase 1D-like [Acyrthosiphon pisum] Back     alignment and taxonomy information
>gi|383854000|ref|XP_003702510.1| PREDICTED: uncharacterized protein LOC100877954 [Megachile rotundata] Back     alignment and taxonomy information
>gi|91084661|ref|XP_967669.1| PREDICTED: similar to protein phosphatase 2c [Tribolium castaneum] gi|270008629|gb|EFA05077.1| hypothetical protein TcasGA2_TC015174 [Tribolium castaneum] Back     alignment and taxonomy information
>gi|350418285|ref|XP_003491811.1| PREDICTED: hypothetical protein LOC100740995 [Bombus impatiens] Back     alignment and taxonomy information
>gi|340726617|ref|XP_003401652.1| PREDICTED: hypothetical protein LOC100644827 [Bombus terrestris] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query348
FB|FBgn0022768 1428 Pp2C1 "Protein phosphatase 2C" 0.899 0.219 0.603 3.6e-103
ZFIN|ZDB-GENE-040426-815 535 ppm1da "protein phosphatase 1D 0.795 0.517 0.478 4.1e-79
UNIPROTKB|F1PFI9 605 PPM1D "Uncharacterized protein 0.793 0.456 0.498 1.1e-74
UNIPROTKB|O15297 605 PPM1D "Protein phosphatase 1D" 0.793 0.456 0.498 1.8e-74
UNIPROTKB|Q8IVR6430 PPM1D "PPM1D protein" [Homo sa 0.793 0.641 0.498 1.8e-74
MGI|MGI:1858214 598 Ppm1d "protein phosphatase 1D 0.790 0.459 0.507 2.3e-74
RGD|1305460 598 Ppm1d "protein phosphatase, Mg 0.790 0.459 0.507 2.3e-74
ZFIN|ZDB-GENE-041114-27 534 ppm1db "protein phosphatase 1D 0.784 0.511 0.483 2.9e-74
UNIPROTKB|E1BD03 605 PPM1D "Uncharacterized protein 0.793 0.456 0.494 4.7e-74
WB|WBGene00021856 766 Y54F10BM.1 [Caenorhabditis ele 0.879 0.399 0.413 1.8e-62
FB|FBgn0022768 Pp2C1 "Protein phosphatase 2C" [Drosophila melanogaster (taxid:7227)] Back     alignment and assigned GO terms
 Score = 1023 (365.2 bits), Expect = 3.6e-103, P = 3.6e-103
 Identities = 196/325 (60%), Positives = 246/325 (75%)

Query:     2 SGIGVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKE 61
             S +GVN+RVTG C QGGRKYMED FSVAYQ++   ++LEYAFFGI+DGHGG EAA +AKE
Sbjct:   250 SSLGVNMRVTGQCCQGGRKYMEDQFSVAYQESPITHELEYAFFGIYDGHGGPEAALFAKE 309

Query:    62 HLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVA 121
             HL+  IV+QK FWSD D+DVL AI EGYI TH AMW++Q  W RT +G  ST+GTTATVA
Sbjct:   310 HLMLEIVKQKQFWSDQDEDVLRAIREGYIATHFAMWREQEKWPRTANGHLSTAGTTATVA 369

Query:   122 FIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVVRKN 181
             F+ + KIY+GHVGDS +VLGYQ++ +++W    LT +HKPE   E  RI ++GG V  K+
Sbjct:   370 FMRREKIYIGHVGDSGIVLGYQNKGERNWLARALTTDHKPESLAEKTRIQRSGGNVAIKS 429

Query:   182 GVPRVVWNRPKIG-HKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGV 240
             GVPRVVWNRP+   H+GP+RR T  DEIPFLAVARSLGD WSYNS    FVVSP+PDV V
Sbjct:   430 GVPRVVWNRPRDPMHRGPIRRRTLVDEIPFLAVARSLGDLWSYNSRFKEFVVSPDPDVKV 489

Query:   241 IEMDTAQHKCLIFGTDGLWNMLSAQDAVDIV---HFT-EVRNEQTEMAQSNNWINPSKCL 296
             ++++ +  +CLIFGTDGLWN+++AQ+AVD V   H   E+ NEQ  M       NPSK L
Sbjct:   490 VKINPSTFRCLIFGTDGLWNVVTAQEAVDSVRKEHLIGEILNEQDVM-------NPSKAL 542

Query:   297 VDEAIEKWRNSRTRADNTSVVTLLI 321
             VD+A++ W   + RADNTSVVT+++
Sbjct:   543 VDQALKTWAAKKMRADNTSVVTVIL 567
GO:0004722 "protein serine/threonine phosphatase activity" evidence=IEA;ISS;NAS
GO:0006470 "protein dephosphorylation" evidence=IEA;ISS;NAS
GO:0016491 "oxidoreductase activity" evidence=IEA
GO:0055114 "oxidation-reduction process" evidence=IEA
ZFIN|ZDB-GENE-040426-815 ppm1da "protein phosphatase 1D magnesium-dependent, delta isoform a" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|F1PFI9 PPM1D "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)] Back     alignment and assigned GO terms
UNIPROTKB|O15297 PPM1D "Protein phosphatase 1D" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
UNIPROTKB|Q8IVR6 PPM1D "PPM1D protein" [Homo sapiens (taxid:9606)] Back     alignment and assigned GO terms
MGI|MGI:1858214 Ppm1d "protein phosphatase 1D magnesium-dependent, delta isoform" [Mus musculus (taxid:10090)] Back     alignment and assigned GO terms
RGD|1305460 Ppm1d "protein phosphatase, Mg2+/Mn2+ dependent, 1D" [Rattus norvegicus (taxid:10116)] Back     alignment and assigned GO terms
ZFIN|ZDB-GENE-041114-27 ppm1db "protein phosphatase 1D magnesium-dependent, delta isoform b" [Danio rerio (taxid:7955)] Back     alignment and assigned GO terms
UNIPROTKB|E1BD03 PPM1D "Uncharacterized protein" [Bos taurus (taxid:9913)] Back     alignment and assigned GO terms
WB|WBGene00021856 Y54F10BM.1 [Caenorhabditis elegans (taxid:6239)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

ID ?Name ?Annotated EC number ?Identity ?Query coverage ?Hit coverage ?RBH(Q2H) ?RBH(H2Q) ?
Q09172PP2C2_SCHPO3, ., 1, ., 3, ., 1, 60.30820.65510.6162yesN/A
Q9QZ67PPM1D_MOUSE3, ., 1, ., 3, ., 1, 60.50700.79590.4632yesN/A
Q9SD02P2C47_ARATH3, ., 1, ., 3, ., 1, 60.30510.78160.7534yesN/A

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.1.3.16LOW CONFIDENCE prediction!
3rd Layer3.1.30.691

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
smart00332252 smart00332, PP2Cc, Serine/threonine phosphatases, 1e-62
cd00143254 cd00143, PP2Cc, Serine/threonine phosphatases, fam 7e-62
pfam00481252 pfam00481, PP2C, Protein phosphatase 2C 5e-56
PLN03145365 PLN03145, PLN03145, Protein phosphatase 2c; Provis 4e-29
COG0631262 COG0631, PTC1, Serine/threonine protein phosphatas 6e-26
PTZ00224381 PTZ00224, PTZ00224, protein phosphatase 2C; Provis 1e-12
>gnl|CDD|214625 smart00332, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information 
 Score =  199 bits (509), Expect = 1e-62
 Identities = 104/318 (32%), Positives = 157/318 (49%), Gaps = 72/318 (22%)

Query: 2   SGIGVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKE 61
           SG  + LR      QG RK MED    A+  T D +D    FFG+FDGHGG EAA +  +
Sbjct: 3   SGKNLGLRYGLSSMQGVRKPMED----AHVITPDLSD-SGGFFGVFDGHGGSEAAKFLSK 57

Query: 62  HLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVA 121
           +L + + ++     D  +DV  A+ + +++T + + ++          L + SG+TA VA
Sbjct: 58  NLPEILAEELIKEKDELEDVEEALRKAFLSTDEEILEE----------LEALSGSTAVVA 107

Query: 122 FIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVV--R 179
            I  +K+YV +VGDS  VL    +       ++LT++HKP   +E  RI  AGG V+  R
Sbjct: 108 LISGNKLYVANVGDSRAVLCRNGKA------VQLTEDHKPSNEDERARIEAAGGFVINGR 161

Query: 180 KNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVG 239
            NGV                           LA++R++GDF+          VS EPDV 
Sbjct: 162 VNGV---------------------------LALSRAIGDFFLKP------YVSAEPDVT 188

Query: 240 VIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDE 299
           V+E+ T +   LI  +DGLW++LS Q+ VDIV   +  ++  + A        +K L+D 
Sbjct: 189 VVEL-TEKDDFLILASDGLWDVLSNQEVVDIV--RKHLSKDPKEA--------AKRLIDL 237

Query: 300 AIEKWRNSRTRADNTSVV 317
           A+      R   DN +VV
Sbjct: 238 ALA-----RGSKDNITVV 250

The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity. Length = 252
>gnl|CDD|238083 cd00143, PP2Cc, Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>gnl|CDD|215938 pfam00481, PP2C, Protein phosphatase 2C Back     alignment and domain information
>gnl|CDD|215603 PLN03145, PLN03145, Protein phosphatase 2c; Provisional Back     alignment and domain information
>gnl|CDD|223704 COG0631, PTC1, Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>gnl|CDD|240318 PTZ00224, PTZ00224, protein phosphatase 2C; Provisional Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 348
KOG0697|consensus379 100.0
PLN03145365 Protein phosphatase 2c; Provisional 100.0
KOG0698|consensus330 100.0
PTZ00224381 protein phosphatase 2C; Provisional 100.0
PF00481254 PP2C: Protein phosphatase 2C; InterPro: IPR001932 100.0
COG0631262 PTC1 Serine/threonine protein phosphatase [Signal 100.0
KOG0700|consensus390 100.0
KOG0699|consensus542 100.0
cd00143254 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
smart00332255 PP2Cc Serine/threonine phosphatases, family 2C, ca 100.0
PRK14559645 putative protein serine/threonine phosphatase; Pro 100.0
KOG1323|consensus493 100.0
KOG1379|consensus330 99.93
PF13672212 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 99.83
KOG0618|consensus 1081 99.81
smart00331193 PP2C_SIG Sigma factor PP2C-like phosphatases. 99.7
TIGR02865764 spore_II_E stage II sporulation protein E. Stage I 99.54
PF07228193 SpoIIE: Stage II sporulation protein E (SpoIIE); I 99.46
COG2208367 RsbU Serine phosphatase RsbU, regulator of sigma s 98.11
>KOG0697|consensus Back     alignment and domain information 
Probab=100.00  E-value=4.3e-49  Score=345.40  Aligned_cols=270  Identities=30%  Similarity=0.463  Sum_probs=231.4

Q ss_pred             CCceeEEEeEEeeccCCCCCcceEEEeeccccCCCCCceeEEEEEcCCChhHHHHHHHHHhHHHHHhccCCCC----CCh
Q psy605            3 GIGVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWS----DND   78 (348)
Q Consensus         3 ~~~~~~~~~~~s~~G~r~~nED~~~v~~~~~~~~~~~~~~~~~V~DGhGG~~~a~~~~~~l~~~l~~~~~~~~----~~~   78 (348)
                      +-++.++||..|.||||-.|||++........  .-.++.||+|||||.|.++|++++.+|.+.+.....|..    .+-
T Consensus        17 G~GNglryg~SSMQGWR~eMEDah~A~~~l~~--~l~dWSfFAVfDGHAGs~va~~c~~hLlehi~sse~F~~~~k~gsv   94 (379)
T KOG0697|consen   17 GEGNGLRYGVSSMQGWRVEMEDAHTAVAGLPS--PLEDWSFFAVFDGHAGSQVANHCAEHLLEHIISSEEFRGMTKNGSV   94 (379)
T ss_pred             CcCCceeeeeccccchhhhhhhhhhhhhcCCC--CccCceEEEEEcCccchHHHHHHHHHHHHHhhhhHHHhhhccCCcH
Confidence            56788999999999999999999886554432  345899999999999999999999999999977665543    556


Q ss_pred             hHHHHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCCceEEEEEEeCCEEEEEEcCCceEEEeEecCCCCceEEEeCCCc
Q psy605           79 DDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKE  158 (348)
Q Consensus        79 ~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~ianvGDSra~l~~~~~~~~~~~~~~Lt~d  158 (348)
                      +.+..-|+..|..+++.+....+....     .-++||||+.+++...++|++|+|||||+++|++      .+..-|.|
T Consensus        95 ~~~~~GIrtGFL~iDE~mr~~~~~~~~-----~drsGsTAVcv~vsp~h~y~~NcGDSRavl~rng------~~~f~TqD  163 (379)
T KOG0697|consen   95 ENVEKGIRTGFLSIDEIMRTLSDISKG-----SDRSGSTAVCVFVSPTHIYIINCGDSRAVLCRNG------EVVFSTQD  163 (379)
T ss_pred             HHHHhhHhhcceeHHHHHhhhhhhhcc-----cccCCceEEEEEecCceEEEEecCcchhheecCC------ceEEeccC
Confidence            788889999999999887765543221     2349999999999999999999999999999998      89999999


Q ss_pred             CCCCCHHHHHHHHHhCCEEeeeCCcceeeecCCCCCCCCCceecccCCCCCceeecccCCCccccCCCC---CCcceeec
Q psy605          159 HKPECPEEIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSEL---DTFVVSPE  235 (348)
Q Consensus       159 H~~~~~~E~~ri~~~g~~v~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~ltRslGd~~~~~~~~---~~~~v~~~  235 (348)
                      |.|.++.|++||+++||.|...    |++                     |.|++||||||+.||+-..   ..+.|+++
T Consensus       164 HKP~~p~EkeRIqnAGGSVMIq----RvN---------------------GsLAVSRAlGDydyK~v~~kgp~eQlVSPE  218 (379)
T KOG0697|consen  164 HKPYLPKEKERIQNAGGSVMIQ----RVN---------------------GSLAVSRALGDYDYKNVPGKGPTEQLVSPE  218 (379)
T ss_pred             CCCCChHHHHHHhcCCCeEEEE----Eec---------------------ceeeeehhccCcccccCCCCCchhcccCCC
Confidence            9999999999999999999876    554                     5899999999999988443   35679999


Q ss_pred             ceeEEEEecCCCCeEEEEecCcccCCCChHHHHHHHHhhhhcchhhhhhhcCCccchHHHHHHHHHHHHHhcCCCCCceE
Q psy605          236 PDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDEAIEKWRNSRTRADNTS  315 (348)
Q Consensus       236 P~i~~~~~~~~~~~~lvl~SDGl~d~l~~~ei~~~i~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~~~g~~DNiT  315 (348)
                      |+|...... ..++|||||+||+||+|+++|++++++.......        ++..+|..+++.++-+     |+.||+|
T Consensus       219 Pev~~~~R~-eedeFivlACDGIwDVMtneelcefv~sRl~Vt~--------dL~~vcn~VvDtCLhK-----GSRDNMs  284 (379)
T KOG0697|consen  219 PEVYIIERS-EEDEFIVLACDGIWDVMTNEELCEFVKSRLEVTS--------DLEEVCNDVVDTCLHK-----GSRDNMS  284 (379)
T ss_pred             CceEEeecc-ccCcEEEEEccchhhhcccHHHHHHHHhhheecc--------cHHHHHHHHHHHHHhc-----cCccCce
Confidence            999999985 5788999999999999999999999998765433        4445899999999998     9999999


Q ss_pred             EEEEEecCC
Q psy605          316 VVTLLIDPP  324 (348)
Q Consensus       316 ~ivv~~~~~  324 (348)
                      +|+|-|-..
T Consensus       285 ivlvcfp~A  293 (379)
T KOG0697|consen  285 IVLVCFPGA  293 (379)
T ss_pred             EEEEecCCC
Confidence            999999443

>PLN03145 Protein phosphatase 2c; Provisional Back     alignment and domain information
>KOG0698|consensus Back     alignment and domain information
>PTZ00224 protein phosphatase 2C; Provisional Back     alignment and domain information
>PF00481 PP2C: Protein phosphatase 2C; InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG0631 PTC1 Serine/threonine protein phosphatase [Signal transduction mechanisms] Back     alignment and domain information
>KOG0700|consensus Back     alignment and domain information
>KOG0699|consensus Back     alignment and domain information
>cd00143 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain; The protein architecture and deduced catalytic mechanism of PP2C phosphatases are similar to the PP1, PP2A, PP2B family of protein Ser/Thr phosphatases, with which PP2C shares no sequence similarity Back     alignment and domain information
>smart00332 PP2Cc Serine/threonine phosphatases, family 2C, catalytic domain Back     alignment and domain information
>PRK14559 putative protein serine/threonine phosphatase; Provisional Back     alignment and domain information
>KOG1323|consensus Back     alignment and domain information
>KOG1379|consensus Back     alignment and domain information
>PF13672 PP2C_2: Protein phosphatase 2C; PDB: 2JFT_A 2JFS_A 2V06_A 2JFR_A 2J86_A 2J82_A 2Y09_A 2XZV_A 2CM1_A 1TXO_B Back     alignment and domain information
>KOG0618|consensus Back     alignment and domain information
>smart00331 PP2C_SIG Sigma factor PP2C-like phosphatases Back     alignment and domain information
>TIGR02865 spore_II_E stage II sporulation protein E Back     alignment and domain information
>PF07228 SpoIIE: Stage II sporulation protein E (SpoIIE); InterPro: IPR001932 This domain is found in protein phosphatase 2C, as well as other proteins eg Back     alignment and domain information
>COG2208 RsbU Serine phosphatase RsbU, regulator of sigma subunit [Signal transduction mechanisms / Transcription] Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
2i44_A324 Crystal Structure Of Serine-Threonine Phosphatase 2 2e-21
3nmv_B324 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 3e-20
3kdj_B316 Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Le 3e-19
3nmn_B319 Crystal Structure Of Pyrabactin-Bound Abscisic Acid 6e-19
3jrq_A326 Crystal Structure Of (+)-aba-bound Pyl1 In Complex 7e-19
3fxj_A390 Crystal Structure Of Human Protein Phosphatase 1a ( 2e-17
1a6q_A382 Crystal Structure Of The Protein SerineTHREONINE PH 2e-17
4ds8_B343 Complex Structure Of Abscisic Acid Receptor Pyl3-(+ 4e-17
3nmt_B341 Crystal Structure Of Pyrabactin Bound Abscisic Acid 4e-17
3rt0_A340 Crystal Structure Of Pyl10-Hab1 Complex In The Abse 4e-17
3qn1_B337 Crystal Structure Of The Pyr1 Abscisic Acid Recepto 5e-17
3kb3_B321 Crystal Structure Of Abscisic Acid-Bound Pyl2 In Co 5e-17
3ujg_B350 Crystal Structure Of Snrk2.6 In Complex With Hab1 L 5e-17
2p8e_A307 Crystal Structure Of The SerineTHREONINE PHOSPHATAS 3e-16
4da1_A389 Crystal Structure Of Branched-Chain Alpha-Ketoacid 8e-15
2iq1_A274 Crystal Structure Of Human Ppm1k Length = 274 1e-14
2i0o_A304 Crystal Structure Of Anopheles Gambiae SerTHR PHOSP 8e-14
3mq3_A467 Crystal Structure Of Native Bovine Pdp1c Length = 4 5e-08
2pnq_A467 Crystal Structure Of Pyruvate Dehydrogenase Phospha 5e-08
2irm_A358 Crystal Structure Of Mitogen-Activated Protein Kina 5e-04
>pdb|2I44|A Chain A, Crystal Structure Of Serine-Threonine Phosphatase 2c From Toxoplasma Gondii Length = 324 Back     alignment and structure 
Iteration: 1

 Score = 99.8 bits (247), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 88/319 (27%), Positives = 144/319 (45%), Gaps = 43/319 (13%)
Query: 17  GGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQ---KSF 73
           GGRK+ ED F++  Q     +D   AFFG+FDG  G     +A E++ D +V Q      
Sbjct: 31  GGRKHQEDRFTLCPQLVPGRDDC--AFFGVFDGTVG----DFASENVKDLVVPQLISSPA 84
Query: 74  WSDNDDDVLHAIHEGYINTHQAMWKDQA---NWQRTQSGLPST--------SGTTATVAF 122
           W +  + +   +    ++       DQA    ++   + L           + +T+  A 
Sbjct: 85  WQEVTEXLRSDVPATEVDEKLPQLLDQAVDDXYKNADNELVKXCEQLNKDYASSTSVTAV 144
Query: 123 IMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVVRKNG 182
           + K  + VGH+GDS +  G +  N     C  LT +HKP+ P E  RI + GG V   + 
Sbjct: 145 LAKGFVAVGHLGDSRIAXGVETPN--GLNCEFLTVDHKPDXPHEKLRIXRNGGSVEYLHN 202
Query: 183 VPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTFVVSPEPDVGVIE 242
                 N+P I       R +  ++   L  +R+ G       +L  + +S +PDV V+ 
Sbjct: 203 H----NNKPFIRGGDFSFRKSRGEQPXQLQYSRAFG-----GKDLKXYGLSNQPDVRVVR 253
Query: 243 MDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDEAIE 302
           + T QH+  I  TDGLW++ SA  AV+I    + R E           NP++ LV+  + 
Sbjct: 254 V-TPQHRVXILATDGLWDVXSAAQAVEIA--XQARQEGR---------NPAQALVEXTLA 301
Query: 303 KWRNSRTRADNTSVVTLLI 321
           + ++    ADN +  T+  
Sbjct: 302 EQQSRNQSADNITAXTVFF 320
>pdb|3NMV|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Abi2 Length = 324 Back     alignment and structure
>pdb|3KDJ|B Chain B, Complex Structure Of (+)-Aba-Bound Pyl1 And Abi1 Length = 316 Back     alignment and structure
>pdb|3NMN|B Chain B, Crystal Structure Of Pyrabactin-Bound Abscisic Acid Receptor Pyl1 In Complex With Type 2c Protein Phosphatase Abi1 Length = 319 Back     alignment and structure
>pdb|3JRQ|A Chain A, Crystal Structure Of (+)-aba-bound Pyl1 In Complex With Abi1 Length = 326 Back     alignment and structure
>pdb|3FXJ|A Chain A, Crystal Structure Of Human Protein Phosphatase 1a (Ppm1a) Bound With Phosphate At 3 Mm Of Mn2+ Length = 390 Back     alignment and structure
>pdb|1A6Q|A Chain A, Crystal Structure Of The Protein SerineTHREONINE PHOSPHATASE 2C AT 2 A Resolution Length = 382 Back     alignment and structure
>pdb|4DS8|B Chain B, Complex Structure Of Abscisic Acid Receptor Pyl3-(+)-Aba-Hab1 In The Presence Of Mn2+ Length = 343 Back     alignment and structure
>pdb|3NMT|B Chain B, Crystal Structure Of Pyrabactin Bound Abscisic Acid Receptor Pyl2 Mutant A93f In Complex With Type 2c Protein Phosphatase Hab1 Length = 341 Back     alignment and structure
>pdb|3RT0|A Chain A, Crystal Structure Of Pyl10-Hab1 Complex In The Absence Of Abscisic Acid (Aba) Length = 340 Back     alignment and structure
>pdb|3QN1|B Chain B, Crystal Structure Of The Pyr1 Abscisic Acid Receptor In Complex With The Hab1 Type 2c Phosphatase Catalytic Domain Length = 337 Back     alignment and structure
>pdb|3KB3|B Chain B, Crystal Structure Of Abscisic Acid-Bound Pyl2 In Complex With Hab1 Length = 321 Back     alignment and structure
>pdb|3UJG|B Chain B, Crystal Structure Of Snrk2.6 In Complex With Hab1 Length = 350 Back     alignment and structure
>pdb|2P8E|A Chain A, Crystal Structure Of The SerineTHREONINE PHOSPHATASE Domain Of Human Ppm1b Length = 307 Back     alignment and structure
>pdb|4DA1|A Chain A, Crystal Structure Of Branched-Chain Alpha-Ketoacid Dehydrogenase Phosphatase With Mg (Ii) Ions At The Active Site Length = 389 Back     alignment and structure
>pdb|2IQ1|A Chain A, Crystal Structure Of Human Ppm1k Length = 274 Back     alignment and structure
>pdb|2I0O|A Chain A, Crystal Structure Of Anopheles Gambiae SerTHR PHOSPHATASE COMPLEXED With Zn2+ Length = 304 Back     alignment and structure
>pdb|3MQ3|A Chain A, Crystal Structure Of Native Bovine Pdp1c Length = 467 Back     alignment and structure
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1 (Pdp1) Length = 467 Back     alignment and structure
>pdb|2IRM|A Chain A, Crystal Structure Of Mitogen-Activated Protein Kinase Kinase Kinase 7 Interacting Protein 1 From Anopheles Gambiae Length = 358 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query348
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 5e-91
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 2e-68
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 6e-66
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 3e-65
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 9e-65
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 4e-64
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 1e-60
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 3e-60
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 1e-59
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 1e-53
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 5e-46
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 3e-42
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 1e-30
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 4e-05
1txo_A237 Putative bacterial enzyme; serine/threonine protei 5e-05
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 1e-04
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 4e-04
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Length = 324 Back     alignment and structure
 Score =  274 bits (703), Expect = 5e-91
 Identities = 82/334 (24%), Positives = 141/334 (42%), Gaps = 47/334 (14%)

Query: 7   NLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDS 66
                   + GGRK+ ED F++  Q     +D   AFFG+FDG  G  A+   K+ ++  
Sbjct: 21  AFDAAIFTDIGGRKHQEDRFTLCPQLVPGRDDC--AFFGVFDGTVGDFASENVKDLVVPQ 78

Query: 67  IVQQKSFWSDND----------------DDVLHAIHEGYINTHQAMWKDQANWQRTQSGL 110
           ++   ++    +                  +  A+ + Y N    + K            
Sbjct: 79  LISSPAWQEVTEMLRSDVPATEVDEKLPQLLDQAVDDMYKNADNELVKMCEQLN------ 132

Query: 111 PSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRI 170
              + +T+  A + K  + VGH+GDS + +G +  N     C  LT +HKP+ P E  RI
Sbjct: 133 KDYASSTSVTAVLAKGFVAVGHLGDSRIAMGVETPN--GLNCEFLTVDHKPDMPHEKLRI 190

Query: 171 TKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSELDTF 230
            + GG V           N+P I       R +  ++   L  +R+ G       +L  +
Sbjct: 191 MRNGGSVEYL----HNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGK-----DLKMY 241

Query: 231 VVSPEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWI 290
            +S +PDV V+ + T QH+ +I  TDGLW+++SA  AV+I                    
Sbjct: 242 GLSNQPDVRVVRV-TPQHRVMILATDGLWDVMSAAQAVEIAMQARQEGR----------- 289

Query: 291 NPSKCLVDEAIEKWRNSRTRADNTSVVTLLIDPP 324
           NP++ LV+  + + ++    ADN + +T+     
Sbjct: 290 NPAQALVEMTLAEQQSRNQSADNITAMTVFFKKT 323
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Length = 382 Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Length = 274 Back     alignment and structure
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Length = 307 Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Length = 389 Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Length = 304 Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Length = 401 Back     alignment and structure
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3ujg_B 3nmt_B* 3rt0_A 3kb3_B* Length = 337 Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Length = 316 Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Length = 358 Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Length = 377 Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Length = 364 Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Length = 467 Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Length = 250 Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Length = 237 Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Length = 234 Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Length = 240 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
2p8e_A307 PPM1B beta isoform variant 6; structural genomics, 100.0
3qn1_B337 Protein phosphatase 2C 16; start domain, BET V dom 100.0
2iq1_A274 Protein phosphatase 2C kappa, PPM1K; structural ge 100.0
3kdj_B316 Protein phosphatase 2C 56; ABA, PYL1, abscisic aci 100.0
1a6q_A382 Phosphatase 2C; catalytic mechanism, metalloenzyme 100.0
2i0o_A304 Ser/Thr phosphatase; beta sandwich, structural gen 100.0
2j4o_A401 Mitogen-activated protein kinase kinase kinase 7-i 100.0
4da1_A389 Protein phosphatase 1K, mitochondrial; metal-ION-a 100.0
3d8k_A377 PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR 100.0
2isn_A364 NYSGXRC-8828Z, phosphatase; pathogenic strain, pra 100.0
2i44_A324 Serine-threonine phosphatase 2C; PSI-2, 8817Z, str 100.0
2irm_A358 Mitogen-activated protein kinase kinase kinase 7 i 100.0
2pnq_A467 [pyruvate dehydrogenase [lipoamide]]-phosphatase 1 100.0
2pk0_A250 Serine/threonine protein phosphatase STP1; SI moti 100.0
1txo_A237 Putative bacterial enzyme; serine/threonine protei 100.0
2j82_A240 TPPHA, protein serine-threonine phosphatase; PP2C 100.0
2jfr_A234 Ser-Thr phosphatase MSPP; hydrolase, PPM phosphata 100.0
3rnr_A211 Stage II sporulation E family protein; structural 100.0
3t91_A242 Stage II sporulation protein E; SPOIIE, phosphatas 99.83
3pu9_A242 Protein serine/threonine phosphatase; PSI-biology, 99.82
3f79_A255 Probable two-component response regulator; adaptor 99.66
3zt9_A193 Serine phosphatase; hydrolase, signal transduction 99.61
3ke6_A 399 Protein RV1364C/MT1410; anti-sigma factor, anti-si 99.17
3eq2_A394 Probable two-component response regulator; adaptor 98.35
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens} Back     alignment and structure
Probab=100.00  E-value=9.9e-48  Score=359.73  Aligned_cols=267  Identities=30%  Similarity=0.416  Sum_probs=211.7

Q ss_pred             eeEEEeEEeeccCCCCCcceEEEeeccccCCCCCceeEEEEEcCCChhHHHHHHHHHhHHHHHhccCCCC---------C
Q psy605            6 VNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKSFWS---------D   76 (348)
Q Consensus         6 ~~~~~~~~s~~G~r~~nED~~~v~~~~~~~~~~~~~~~~~V~DGhGG~~~a~~~~~~l~~~l~~~~~~~~---------~   76 (348)
                      ..+.++..+.+|+|+.|||++++......  ...+..+|+|||||||+.+|+++++.+++.|.+...+..         .
T Consensus        22 ~~~~~~~~s~~G~R~~nED~~~~~~~~~~--~~~~~~l~~V~DGhGG~~~a~~as~~~~~~l~~~~~~~~~~~~~~~~~~   99 (307)
T 2p8e_A           22 NGLRYGLSSMQGWRVEMEDAHTAVVGIPH--GLEDWSFFAVYDGHAGSRVANYCSTHLLEHITTNEDFRAAGKSGSALEL   99 (307)
T ss_dssp             TTEEEEEEEEEETSSSCCEEEEEEEEETT--TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSTTTC-----------
T ss_pred             CCeeEEEEecCCCCCcccceEEEEecCCC--CCCCeEEEEEECCCCCHHHHHHHHHHHHHHHHhhHhhhhcccccccccc
Confidence            46889999999999999999988643211  113578999999999999999999999999986433322         1


Q ss_pred             ChhHHHHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCCceEEEEEEeCCEEEEEEcCCceEEEeEecCCCCceEEEeCC
Q psy605           77 NDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELT  156 (348)
Q Consensus        77 ~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~ianvGDSra~l~~~~~~~~~~~~~~Lt  156 (348)
                      ..+.+.++|.++|..+++.+.+......     ....+|||++++++.++++|+||+||||+|+++++      .+.+||
T Consensus       100 ~~~~~~~~l~~a~~~~~~~i~~~~~~~~-----~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g------~~~~lT  168 (307)
T 2p8e_A          100 SVENVKNGIRTGFLKIDEYMRNFSDLRN-----GMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNG------QVCFST  168 (307)
T ss_dssp             CHHHHHHHHHHHHHHHHHHHHTSTTTC--------CCCEECEEEEEECSSEEEEEEESSCEEEEEETT------EEEEEC
T ss_pred             cHHHHHHHHHHHHHHHHHHHHhhhhhcc-----CCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECC------ccccCC
Confidence            3456788999999999998876432211     11348999999999999999999999999999987      899999


Q ss_pred             CcCCCCCHHHHHHHHHhCCEEeeeCCcceeeecCCCCCCCCCceecccCCCCCceeecccCCCccccCCCC---CCccee
Q psy605          157 KEHKPECPEEIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSEL---DTFVVS  233 (348)
Q Consensus       157 ~dH~~~~~~E~~ri~~~g~~v~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~ltRslGd~~~~~~~~---~~~~v~  233 (348)
                      +||++.++.|+.||...|+.+...    |+.                     +.+++||||||..+|....   ..+.++
T Consensus       169 ~DH~~~~~~E~~rI~~~gg~v~~~----rv~---------------------g~l~ltRalGd~~~k~~~~~~~~~~~v~  223 (307)
T 2p8e_A          169 QDHKPCNPREKERIQNAGGSVMIQ----RVN---------------------GSLAVSRALGDYDYKCVDGKGPTEQLVS  223 (307)
T ss_dssp             CCCCTTSHHHHHHHHHTTCCEETT----EET---------------------TTBSCSBCEECGGGSCCTTCCGGGSSSB
T ss_pred             CCCCCCCHHHHHHHHHcCCEEEeC----ccc---------------------CeEeccccccCHHHhcCcccCCCCCeEe
Confidence            999999999999999999986532    331                     3579999999997775432   234578


Q ss_pred             ecceeEEEEecCCCCeEEEEecCcccCCCChHHHHHHHHhhhhcchhhhhhhcCCccchHHHHHHHHHHHHHhcCCCCCc
Q psy605          234 PEPDVGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDEAIEKWRNSRTRADN  313 (348)
Q Consensus       234 ~~P~i~~~~~~~~~~~~lvl~SDGl~d~l~~~ei~~~i~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~~~g~~DN  313 (348)
                      ++|++..+++. ..++|||||||||||+++++++.+++.......        .++..+|+.|++.|+++     |+.||
T Consensus       224 ~~pdv~~~~l~-~~d~~llL~SDGl~d~ls~~ei~~~v~~~~~~~--------~~~~~~a~~Lv~~A~~~-----g~~DN  289 (307)
T 2p8e_A          224 PEPEVYEILRA-EEDEFIILACDGIWDVMSNEELCEYVKSRLEVS--------DDLENVCNWVVDTCLHK-----GSRDN  289 (307)
T ss_dssp             CCCEEEEEECC-TTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTC--------CCHHHHHHHHHHHHHHT-----TCCSC
T ss_pred             ccCeEEEEEcC-CCCeEEEEECCCcccCCCHHHHHHHHHHHHhcC--------CCHHHHHHHHHHHHHHc-----CCCCC
Confidence            99999998885 345699999999999999999999998743211        13445899999999998     99999


Q ss_pred             eEEEEEEecCC
Q psy605          314 TSVVTLLIDPP  324 (348)
Q Consensus       314 iT~ivv~~~~~  324 (348)
                      ||||||++...
T Consensus       290 iTvivv~~~~~  300 (307)
T 2p8e_A          290 MSIVLVCFSNE  300 (307)
T ss_dssp             EEEEEEEC---
T ss_pred             eEEEEEECCCC
Confidence            99999998654
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B* Back     alignment and structure
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens} Back     alignment and structure
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B* Back     alignment and structure
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A Back     alignment and structure
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae} Back     alignment and structure
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A Back     alignment and structure
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A Back     alignment and structure
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii} Back     alignment and structure
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii} Back     alignment and structure
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii} Back     alignment and structure
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae} Back     alignment and structure
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A Back     alignment and structure
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae} Back     alignment and structure
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A Back     alignment and structure
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A Back     alignment and structure
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A Back     alignment and structure
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans} Back     alignment and structure
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A* Back     alignment and structure
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus} Back     alignment and structure
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A Back     alignment and structure
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica} Back     alignment and structure
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis} Back     alignment and structure
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 348
d1a6qa2295 d.219.1.1 (A:2-296) Protein serine/threonine phosp 7e-41
d1txoa_235 d.219.1.1 (A:) putative serine/threonine phosphata 8e-14
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 295 Back     information, alignment and structure

class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  143 bits (360), Expect = 7e-41
 Identities = 84/329 (25%), Positives = 124/329 (37%), Gaps = 52/329 (15%)

Query: 2   SGIGVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKE 61
            G G  LR      QG R  MED  +             ++FF ++DGH G + A Y  E
Sbjct: 15  QGQGNGLRYGLSSMQGWRVEMEDAHTAVIGLPSGLES--WSFFAVYDGHAGSQVAKYCCE 72

Query: 62  HLLDSIVQQKSFWSDNDDDVLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVA 121
           HLLD I   + F        +  +  G       + +        + G    SG+TA   
Sbjct: 73  HLLDHITNNQDFKGSAGAPSVENVKNGIRTGFLEIDEHMRVMSEKKHG-ADRSGSTAVGV 131

Query: 122 FIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHKPECPEEIKRITKAGGKVVRKN 181
            I     Y  + GDS  +L          K    T++HKP  P E +RI  AGG      
Sbjct: 132 LISPQHTYFINCGDSRGLLCRN------RKVHFFTQDHKPSNPLEKERIQNAGGS----- 180

Query: 182 GVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDF---WSYNSELDTFVVSPEPDV 238
                V  +   G                LAV+R+LGDF     +       +VSPEP+V
Sbjct: 181 -----VMIQRVNGS---------------LAVSRALGDFDYKCVHGKGPTEQLVSPEPEV 220

Query: 239 GVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVD 298
             IE      + +I   DG+W+++  ++  D V         + +  +++       +VD
Sbjct: 221 HDIERSEEDDQFIILACDGIWDVMGNEELCDFVR--------SRLEVTDDLEKVCNEVVD 272

Query: 299 EAIEKWRNSRTRADNTSVVTLLIDPPGPP 327
             + K        DN SV+  LI  P  P
Sbjct: 273 TCLYKGSR-----DNMSVI--LICFPNAP 294
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Length = 235 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query348
d1a6qa2295 Protein serine/threonine phosphatase 2C, catalytic 100.0
d1txoa_235 putative serine/threonine phosphatase pstp/ppp {My 100.0
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
class: Alpha and beta proteins (a+b)
fold: PP2C-like
superfamily: PP2C-like
family: PP2C-like
domain: Protein serine/threonine phosphatase 2C, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-52  Score=386.08  Aligned_cols=270  Identities=30%  Similarity=0.421  Sum_probs=223.9

Q ss_pred             ceeEEEeEEeeccCCCCCcceEEEeeccccCCCCCceeEEEEEcCCChhHHHHHHHHHhHHHHHhccC----CCCCChhH
Q psy605            5 GVNLRVTGHCNQGGRKYMEDMFSVAYQQTEDFNDLEYAFFGIFDGHGGVEAATYAKEHLLDSIVQQKS----FWSDNDDD   80 (348)
Q Consensus         5 ~~~~~~~~~s~~G~r~~nED~~~v~~~~~~~~~~~~~~~~~V~DGhGG~~~a~~~~~~l~~~l~~~~~----~~~~~~~~   80 (348)
                      +.++.||.+|.+|+|++|||++.+......  ...+..||||||||||+.+|++++++++..|.+...    ......+.
T Consensus        18 ~~~~~~g~~s~~G~R~~~ED~~~~~~~~~~--~~~~~~lf~V~DGhGG~~~s~~~~~~l~~~l~~~~~~~~~~~~~~~~~   95 (295)
T d1a6qa2          18 GNGLRYGLSSMQGWRVEMEDAHTAVIGLPS--GLESWSFFAVYDGHAGSQVAKYCCEHLLDHITNNQDFKGSAGAPSVEN   95 (295)
T ss_dssp             ETTEEEEEEEEEETSSSCCEEEEEEEEETT--TEEEEEEEEEEEEESCSHHHHHHHHHHHHHHHTSHHHHCSSSSCCHHH
T ss_pred             CCceEEEEEeCccCCCcccCeeEEEcccCC--CCCceEEEEEEeCCCChHHHHHHHHHHHHHHHHhhhhccccccchHHH
Confidence            356899999999999999999988654322  123678999999999999999999999999976532    23345577


Q ss_pred             HHHHHHHHHHHhHHHHHHHHHhhhhhcCCCCCCCCceEEEEEEeCCEEEEEEcCCceEEEeEecCCCCceEEEeCCCcCC
Q psy605           81 VLHAIHEGYINTHQAMWKDQANWQRTQSGLPSTSGTTATVAFIMKSKIYVGHVGDSMLVLGYQDENDKSWKCLELTKEHK  160 (348)
Q Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~ianvGDSra~l~~~~~~~~~~~~~~Lt~dH~  160 (348)
                      +.++|+++|..+++.+........     ....+|||++++++.++++|+||+||||+|+++++      .+++||.||+
T Consensus        96 ~~~al~~a~~~~~~~~~~~~~~~~-----~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~------~~~~lT~dH~  164 (295)
T d1a6qa2          96 VKNGIRTGFLEIDEHMRVMSEKKH-----GADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNR------KVHFFTQDHK  164 (295)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHHTT-----CCCCCEECEEEEEECSSEEEEEEESSCEEEEEETT------EEEEECCCCC
T ss_pred             HHHHHHHHHHHHHHHHhhhhhhcc-----CcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecc------cceeeccccC
Confidence            888999999999888776544322     23458999999999999999999999999999977      8999999999


Q ss_pred             CCCHHHHHHHHHhCCEEeeeCCcceeeecCCCCCCCCCceecccCCCCCceeecccCCCccccCCC---CCCcceeecce
Q psy605          161 PECPEEIKRITKAGGKVVRKNGVPRVVWNRPKIGHKGPVRRSTAFDEIPFLAVARSLGDFWSYNSE---LDTFVVSPEPD  237 (348)
Q Consensus       161 ~~~~~E~~ri~~~g~~v~~~~~~~r~~~~~~~~~~~g~~~~~~~~~~~~~~~ltRslGd~~~~~~~---~~~~~v~~~P~  237 (348)
                      +.++.|+.||.+.|+.+...    |+.                     |.+++||||||+.+|...   ...+.+++.|+
T Consensus       165 ~~~~~E~~Ri~~~gg~v~~~----r~~---------------------g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pd  219 (295)
T d1a6qa2         165 PSNPLEKERIQNAGGSVMIQ----RVN---------------------GSLAVSRALGDFDYKCVHGKGPTEQLVSPEPE  219 (295)
T ss_dssp             TTSHHHHHHHHHTTCCEETT----EET---------------------TTBSCSBCEECGGGSCCTTCCGGGSSSBCCCE
T ss_pred             cccHHHHhhHhhcCCccccc----ccC---------------------CceeeeeccCcHHhhhccccCccccccccccc
Confidence            99999999999999987542    321                     478999999999877643   23467999999


Q ss_pred             eEEEEecCCCCeEEEEecCcccCCCChHHHHHHHHhhhhcchhhhhhhcCCccchHHHHHHHHHHHHHhcCCCCCceEEE
Q psy605          238 VGVIEMDTAQHKCLIFGTDGLWNMLSAQDAVDIVHFTEVRNEQTEMAQSNNWINPSKCLVDEAIEKWRNSRTRADNTSVV  317 (348)
Q Consensus       238 i~~~~~~~~~~~~lvl~SDGl~d~l~~~ei~~~i~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~~~g~~DNiT~i  317 (348)
                      |..+++..+.++|||||||||||+|+++|+.+++........        +++.+|+.|++.|+++     ++.||||||
T Consensus       220 i~~~~~~~~~~~flvL~SDGl~d~l~~~ei~~~v~~~~~~~~--------~~~~~a~~Lv~~A~~~-----gs~DNiTvi  286 (295)
T d1a6qa2         220 VHDIERSEEDDQFIILACDGIWDVMGNEELCDFVRSRLEVTD--------DLEKVCNEVVDTCLYK-----GSRDNMSVI  286 (295)
T ss_dssp             EEEEECCTTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCC--------CHHHHHHHHHHHHHHT-----TCCSCEEEE
T ss_pred             ceEEEeecccceeEeeecCcccccCCHHHHHHHHHHHhhcCC--------CHHHHHHHHHHHHHhc-----CCCCCeEEE
Confidence            999999777788999999999999999999999987543222        4456899999999998     899999999


Q ss_pred             EEEecCCC
Q psy605          318 TLLIDPPG  325 (348)
Q Consensus       318 vv~~~~~~  325 (348)
                      ||.|+..+
T Consensus       287 vv~~~~~~  294 (295)
T d1a6qa2         287 LICFPNAP  294 (295)
T ss_dssp             EEECTTSC
T ss_pred             EEeccCCC
Confidence            99997654
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure