Psyllid ID: psy613

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-----
MDKLNSLEDIDTNTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKVKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNNIPRRAGVSSFGVGGSNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFIIKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNGIYTNFSKN
ccccccccccccccEEEEEccccccccccHHHHHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccHHHHHHHHcccccccccccccccHHHHHHHHHHcccccccccHHHHcHHHHHHHHHHHHHHHccccccEEEccEEEEEcHHHHHHHHHcccccccccccccccccccEEcccEEEEEEEccHHHHHHcccEEEEEEEEEEccccccccccccccHHHHHHHHHHHHHHcccccccccEEEccccccccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccccEEEcccccccccccccccEEEEEcccccccccEEEEEEEccccccccccccccccEEEEEEccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHcccccccEEEEEEccHHHHHHHHHHHHcccccccEEEEEccc
cccHHHHHHcccccEEEEEEEEcccccccHHHHHHHHHcccccEcccccccccHHHHccccccccccEEEEcccccccHccccHHHccccHHHHHHccHHHHHHHHHHHHHHHHccccHHHHcccccEEEEEEcccHHHHHHHcccccccEEEEcccHHHHHHccEEEEEcccccEEEEccccHHHHHHHHHHHHHHHcccccEEEEccEEEEcccHHHHHHHHHcccccccccccccccccccccccccEEEEEEEHHHHHHccccEEEEEEEcEEccccccccccccccHHHHHHHHHHHHHccccHHHccEEEEcccccccccHHHHHHHHHHHcccccccccccccccEEEEEEHccccHHHHHHHHHHHHHHHHHHHcccccccccccccccccccccccEEEEcccccccccccccccEEEEEEccccccccEEEEEccccccccccccccccccEEEEEEcccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHcccEEEEEccHHHHHHHHHHHHcccccccEEEEEccc
mdklnsledidtntiaiigiggkfpgskniNDFWRKLennedaitevptsrwdwkaiygdphlesgktkvkwggflydadcfdanffgispaeaevmdpQLRLFIETTWAAledagyppsklsgsktaifAGVSTADYKDILNEARHKGLVkslaepfpfmiANRVSYLFnfhgpsevidtACSSSLIAINRAIESLHLKNCDLALAggvnilaspnitiasskagllsengrcmtfdqrangyvrsegvgvillkplknaiidndhiygifrgnfenhgghsssptspnmlAQKQLLIDVYRraninpytinyieahgtgtklgdpievnGLKSAFSELHEyyktpllkpycglgsvkanighleaaSGVIGVIKVLLMLKYkkipgnphlkipnsylkldntpfylvnktcdwiqldnniprragvssfgvggsNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFIIKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNGIYTNFSKN
mdklnsledidtntiaiigiggkfpgsKNINDFWRKLENNEDaitevptsrwdwKAIYGDPHLESGKTKVKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAgyppsklsgsKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNNIPRRAGvssfgvggsnvHVIIEEYRkniktkyikentVLVRIIMLSAKTKKSLKEYVILLLEFIIKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKitngiytnfskn
MDKLNSLEDIDTNTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKVKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNNIPRRAgvssfgvggsnvhvIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFIIKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNGIYTNFSKN
*********IDTNTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKVKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGN*******************KQLLIDVYRRANINPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNNIPRRAGVSSFGVGGSNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFIIKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNGIYTN****
***************AIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKVKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNNIPRRAGVSSFGVGGSNVHVIIE*******************IIMLSAKTKKSLKEYVILLLEFIIKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITN*********
MDKLNSLEDIDTNTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKVKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGNFENH*********PNMLAQKQLLIDVYRRANINPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNNIPRRAGVSSFGVGGSNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFIIKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNGIYTNFSKN
**KLNSLEDIDTNTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKVKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNNIPRRAGVSSFGVGGSNVHVIIEEYRK**********TVLVRIIMLSAKTKKSLKEYVILLLEFIIKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNGIYTN****
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MDKLNSLEDIDTNTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKVKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNNIPRRAGVSSFGVGGSNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFIIKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNGIYTNFSKN
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query545 2.2.26 [Sep-21-2011]
P40806 5043 Polyketide synthase PksJ yes N/A 0.965 0.104 0.476 1e-143
O31782 5488 Polyketide synthase PksN no N/A 0.955 0.094 0.478 1e-139
P40872 4262 Polyketide synthase PksM no N/A 0.933 0.119 0.452 1e-125
Q05470 4538 Polyketide synthase PksL no N/A 0.919 0.110 0.413 1e-118
O31784 2543 Polyketide synthase PksR no N/A 0.911 0.195 0.392 1e-100
Q7TXL9 1538 Phthiocerol/phenolphthioc yes N/A 0.871 0.308 0.401 1e-100
Q10978 1538 Phthiocerol synthesis pol yes N/A 0.871 0.308 0.401 1e-100
P96203 1827 Phthiocerol synthesis pol no N/A 0.774 0.230 0.435 6e-99
Q7TXL7 1827 Phthiocerol/phenolphthioc no N/A 0.774 0.230 0.435 7e-99
Q9R9J1 3971 Mycosubtilin synthase sub no N/A 0.911 0.125 0.393 2e-98
>sp|P40806|PKSJ_BACSU Polyketide synthase PksJ OS=Bacillus subtilis (strain 168) GN=pksJ PE=1 SV=3 Back     alignment and function desciption
 Score =  510 bits (1313), Expect = e-143,   Method: Compositional matrix adjust.
 Identities = 257/539 (47%), Positives = 357/539 (66%), Gaps = 13/539 (2%)

Query: 5    NSLEDIDTNTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLE 64
            N  +  D   +AI+GI G+FPG+ +I++FW+ LE  +D+ITEVP  RWDW+  YG+P  +
Sbjct: 3332 NKKQAADFEPVAIVGISGRFPGAMDIDEFWKNLEEGKDSITEVPKDRWDWREHYGNPDTD 3391

Query: 65   SGKTKVKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSG 124
              KT +KWGGF+     FD  FFGISP EA+ +DPQ RL +   W ALEDAG  P  LSG
Sbjct: 3392 VNKTDIKWGGFIDGVAEFDPLFFGISPREADYVDPQQRLLMTYVWKALEDAGCSPQSLSG 3451

Query: 125  SKTAIFAGVSTADYKDILNEARH--KGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTA 182
            + T IF G     YKD+ + A    +G   +     P +  NR+SY  N HGPSE ++TA
Sbjct: 3452 TGTGIFIGTGNTGYKDLFHRANLPIEGHAAT-GHMIPSVGPNRMSYFLNIHGPSEPVETA 3510

Query: 183  CSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRAN 242
            CSSSL+AI+RA+ ++   +C++A+AGGVN + +    I+ SKAG+LS +GRC TF   AN
Sbjct: 3511 CSSSLVAIHRAVTAMQNGDCEMAIAGGVNTILTEEAHISYSKAGMLSTDGRCKTFSADAN 3570

Query: 243  GYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVY 302
            GYVR EGVG+++LK L++A  D +HIYG+ RG  ENHGG +++ TSPN  AQ  LL+  Y
Sbjct: 3571 GYVRGEGVGMVMLKKLEDAERDGNHIYGVIRGTAENHGGRANTLTSPNPKAQADLLVRAY 3630

Query: 303  RRANINPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYY--KTPLLKPY-CGLGSVK 359
            R+A+I+P T+ YIEAHGTGT+LGDPIE+NGLK+AF EL        P +  + CG+GSVK
Sbjct: 3631 RQADIDPSTVTYIEAHGTGTELGDPIEINGLKAAFKELSNMRGESQPDVPDHRCGIGSVK 3690

Query: 360  ANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLD 419
            +NIGHLE A+G+ G+IKVLL +K+K +  + H +  N YL+L ++PFY+V +  +W  + 
Sbjct: 3691 SNIGHLELAAGISGLIKVLLQMKHKTLVKSLHCETLNPYLQLTDSPFYIVQEKQEWKSVT 3750

Query: 420  ----NNIPRRAGVSSFGVGGSNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLK 475
                N +PRRAG+SSFG+GG N H++IEEY     +++    T    +I+LSAK K  L 
Sbjct: 3751 DRDGNELPRRAGISSFGIGGVNAHIVIEEYMPKANSEHTA--TEQPNVIVLSAKNKSRLI 3808

Query: 476  EYVILLLEFIIKEK-NNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKK 533
            +    LLE I  +K  +  L  +AYTLQVGRE M  RLA    + ++L +KLQ +++ K
Sbjct: 3809 DRASQLLEVIRNKKYTDQDLHRIAYTLQVGREEMDERLACVAGTMQELEEKLQAFVDGK 3867
Involved in some intermediate steps for the synthesis of the antibiotic polyketide bacillaene which is involved in secondary metabolism.
Bacillus subtilis (strain 168) (taxid: 224308)
>sp|O31782|PKSN_BACSU Polyketide synthase PksN OS=Bacillus subtilis (strain 168) GN=pksN PE=1 SV=3 Back     alignment and function description
>sp|P40872|PKSM_BACSU Polyketide synthase PksM OS=Bacillus subtilis (strain 168) GN=pksM PE=1 SV=4 Back     alignment and function description
>sp|Q05470|PKSL_BACSU Polyketide synthase PksL OS=Bacillus subtilis (strain 168) GN=pksL PE=1 SV=3 Back     alignment and function description
>sp|O31784|PKSR_BACSU Polyketide synthase PksR OS=Bacillus subtilis (strain 168) GN=pksR PE=1 SV=2 Back     alignment and function description
>sp|Q7TXL9|PPSB_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsB PE=1 SV=1 Back     alignment and function description
>sp|Q10978|PPSB_MYCTU Phthiocerol synthesis polyketide synthase type I PpsB OS=Mycobacterium tuberculosis GN=ppsB PE=3 SV=2 Back     alignment and function description
>sp|P96203|PPSD_MYCTU Phthiocerol synthesis polyketide synthase type I PpsD OS=Mycobacterium tuberculosis GN=ppsD PE=3 SV=1 Back     alignment and function description
>sp|Q7TXL7|PPSD_MYCBO Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD OS=Mycobacterium bovis (strain ATCC BAA-935 / AF2122/97) GN=ppsD PE=3 SV=1 Back     alignment and function description
>sp|Q9R9J1|MYCA_BACIU Mycosubtilin synthase subunit A OS=Bacillus subtilis GN=mycA PE=3 SV=1 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query545
44662946 8601 mixed type I polyketide synthase/nonribo 0.955 0.060 0.631 0.0
282554962 12645 hybrid trans-AT polyketide synthase - no 0.965 0.041 0.536 1e-167
242238868 6876 KR domain-containing protein [Dickeya da 0.941 0.074 0.541 1e-167
417353289 6614 polyketide synthase [Serratia plymuthica 0.974 0.080 0.520 1e-161
307604175 4956 SorB [Sorangium cellulosum] 0.941 0.103 0.530 1e-160
121624847 5381 BryC [Candidatus Endobugula sertula] 0.963 0.097 0.529 1e-160
270261893 2649 hypothetical protein SOD_b01000 [Serrati 0.974 0.200 0.516 1e-160
117617419 5378 BryC [Candidatus Endobugula sertula] 0.963 0.097 0.525 1e-160
427414902 4430 KR domain-containig protein [Leptolyngby 0.943 0.116 0.519 1e-158
307604181 3885 SorH [Sorangium cellulosum] 0.959 0.134 0.516 1e-158
>gi|44662946|gb|AAS47564.1| mixed type I polyketide synthase/nonribosomal peptide synthetase [symbiont bacterium of Paederus fuscipes] Back     alignment and taxonomy information
 Score =  712 bits (1837), Expect = 0.0,   Method: Composition-based stats.
 Identities = 333/527 (63%), Positives = 418/527 (79%), Gaps = 6/527 (1%)

Query: 11   DTNTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKV 70
            D   +A+IG+ GKFPG +++ DFW  L++ +D I+EVP  RWDW+  YGDPH E GKTK+
Sbjct: 6459 DLEAVAVIGMAGKFPGCEDLEDFWTCLQSCQDLISEVPEQRWDWRRFYGDPHQEPGKTKI 6518

Query: 71   KWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIF 130
            KWGGF+ DADCFDA FFGISP EAEVMDPQLRLF+ET WAALEDAGYP  +L+GS+T +F
Sbjct: 6519 KWGGFVADADCFDARFFGISPVEAEVMDPQLRLFLETVWAALEDAGYPAGRLAGSRTGVF 6578

Query: 131  AGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIAI 190
            AGV+TADYKD+L EAR +GLV++ +EPFPFMIANR+SY FNF+GPSE IDTACSSSLIA+
Sbjct: 6579 AGVATADYKDLLIEARARGLVQTPSEPFPFMIANRISYWFNFNGPSEAIDTACSSSLIAV 6638

Query: 191  NRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGV 250
            ++AIESL L +C++ALAGGVN+L SP ITIASS+AG+LSE+GRCMTFD+RANGYVRSEGV
Sbjct: 6639 HKAIESLRLGSCEMALAGGVNVLGSPRITIASSQAGMLSEDGRCMTFDERANGYVRSEGV 6698

Query: 251  GVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINPY 310
             ++LLKPL+ AI DND I+G+ RG+ ENHGG S+SPT+PN  AQK+LL+D+Y RA+I+P 
Sbjct: 6699 AILLLKPLRKAIADNDRIHGLIRGSGENHGGRSASPTAPNGNAQKRLLVDIYSRADIDPR 6758

Query: 311  TINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPL-LKPYCGLGSVKANIGHLEAAS 369
            TI+YIEAHGTGT LGDP+EVNGLK+AF EL++     +  +P+CGL SVKAN+GHLEAA+
Sbjct: 6759 TISYIEAHGTGTVLGDPVEVNGLKAAFQELYQSRGLDVPEQPHCGLNSVKANVGHLEAAA 6818

Query: 370  GVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQ----LDNNIPRR 425
            G +G++KVLLMLK++KIPGNPHL+ PN YL+L+ TPFYLV +T DW Q      N + RR
Sbjct: 6819 GAVGIVKVLLMLKHRKIPGNPHLRRPNPYLQLEGTPFYLVRETLDWPQPTDVRGNPLARR 6878

Query: 426  AGVSSFGVGGSNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFI 485
            AGVSSFGVGGSN HVI+EEY++  +  +  E      +I+LSAK ++ L      LL FI
Sbjct: 6879 AGVSSFGVGGSNAHVILEEYQEPERQGWGSE-PAYPALIVLSAKDEERLVCVAQRLLRFI 6937

Query: 486  IKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNK 532
                +   L D+AYTLQVGREAM  RLA+ V S   L  +LQ +L +
Sbjct: 6938 RDYGSELYLHDIAYTLQVGREAMPRRLALAVTSLAQLADRLQTWLEQ 6984

Source: symbiont bacterium of Paederus fuscipes

Species: symbiont bacterium of Paederus fuscipes

Genus:

Family:

Order:

Class:

Phylum:

Superkingdom: Bacteria
>gi|282554962|gb|ADA82585.1| hybrid trans-AT polyketide synthase - nonribosomal peptide synthetase [uncultured bacterium psy1] Back     alignment and taxonomy information
>gi|242238868|ref|YP_002987049.1| KR domain-containing protein [Dickeya dadantii Ech703] gi|242130925|gb|ACS85227.1| KR domain protein [Dickeya dadantii Ech703] Back     alignment and taxonomy information
>gi|417353289|gb|AFX60336.1| polyketide synthase [Serratia plymuthica] Back     alignment and taxonomy information
>gi|307604175|gb|ADN68477.1| SorB [Sorangium cellulosum] Back     alignment and taxonomy information
>gi|121624847|gb|ABM63528.1| BryC [Candidatus Endobugula sertula] Back     alignment and taxonomy information
>gi|270261893|ref|ZP_06190165.1| hypothetical protein SOD_b01000 [Serratia odorifera 4Rx13] gi|270043769|gb|EFA16861.1| hypothetical protein SOD_b01000 [Serratia odorifera 4Rx13] Back     alignment and taxonomy information
>gi|117617419|gb|ABK51301.1| BryC [Candidatus Endobugula sertula] Back     alignment and taxonomy information
>gi|427414902|ref|ZP_18905089.1| KR domain-containig protein [Leptolyngbya sp. PCC 7375] gi|425755555|gb|EKU96420.1| KR domain-containig protein [Leptolyngbya sp. PCC 7375] Back     alignment and taxonomy information
>gi|307604181|gb|ADN68483.1| SorH [Sorangium cellulosum] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query545
UNIPROTKB|Q4KCD6 4039 rzxD "Polyketide synthase RzxD 0.965 0.130 0.450 1.6e-119
UNIPROTKB|Q4KCD3 2541 rzxF "Polyketide synthase RzxF 0.911 0.195 0.422 1.1e-97
UNIPROTKB|Q4KCD7 4937 rzxC "Polyketide synthase RzxC 0.933 0.103 0.398 7.8e-91
UNIPROTKB|Q4KCD4 4163 rzxE "Polyketide synthase RzxE 0.915 0.119 0.396 7.8e-91
UNIPROTKB|Q4KCD8 6675 rzxB "Polyketide synthase/nonr 0.932 0.076 0.395 9e-91
UNIPROTKB|P96203 1827 ppsD "Phthiocerol synthesis po 0.875 0.261 0.388 7.2e-86
UNIPROTKB|Q7TXL7 1827 ppsD "Phthiocerol/phenolphthio 0.875 0.261 0.388 7.2e-86
UNIPROTKB|Q10978 1538 ppsB "Phthiocerol synthesis po 0.871 0.308 0.381 1.9e-83
UNIPROTKB|Q7TXL9 1538 ppsB "Phthiocerol/phenolphthio 0.871 0.308 0.381 1.9e-83
UNIPROTKB|P96291 2111 mas "Probable multifunctional 0.917 0.236 0.349 4.9e-78
UNIPROTKB|Q4KCD6 rzxD "Polyketide synthase RzxD" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
 Score = 1194 (425.4 bits), Expect = 1.6e-119, P = 1.6e-119
 Identities = 244/542 (45%), Positives = 343/542 (63%)

Query:    10 IDTNTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTK 69
             ID + IA+IGI G+FP ++++  F+  L++  D I+E+P +RWDW+  YGDPH E  KT 
Sbjct:  1522 ID-DEIAVIGISGRFPMAEDVEQFFHNLKDGRDCISEIPANRWDWREYYGDPHREVDKTN 1580

Query:    70 VKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAI 129
             VKWGGF++  D FD  FF ISP EA++MDPQ RL +   W A+EDAGY  + L+GS T I
Sbjct:  1581 VKWGGFIHGVDHFDPLFFAISPREAQLMDPQQRLLMTYVWLAIEDAGYASADLAGSDTGI 1640

Query:   130 FAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIA 189
             F G     Y  ++ +A       S     P +  NR+S+L +FHGPSE ++TACSSSL+A
Sbjct:  1641 FVGTGVTGYSSLIAKAGIPVEGYSATAMVPSVGPNRMSFLLDFHGPSEPVETACSSSLVA 1700

Query:   190 INRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEG 249
             I+RA++++H  +C +A+ GGVN L +P   I+ SKAG+L+ +GR  TF  +ANGY R EG
Sbjct:  1701 IHRAVQAIHSGDCAMAVVGGVNTLIAPEAQISFSKAGMLALDGRSKTFSAQANGYARGEG 1760

Query:   250 VGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINP 309
             VG+I+LK    A  D D+IY + R   ENHGG ++S T+PN  AQ +LL   YR+A ++P
Sbjct:  1761 VGMIVLKKRAQAEADGDNIYALIRSTAENHGGKANSLTAPNPRAQAELLKSAYRKAGVDP 1820

Query:   310 YTINYIEAHGTGTKLGDPIEVNGLKSAFSELH-EYYKTPLLKPYCGLGSVKANIGHLEAA 368
              ++ YIEAHGTGT+LGDPIE+NGLK AF EL+ E     L + YCG+GSVK+N+GHLE A
Sbjct:  1821 RSVGYIEAHGTGTELGDPIEINGLKMAFRELNQELGNEALAQGYCGVGSVKSNMGHLELA 1880

Query:   369 SGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLD----NNIPR 424
             +G+ GVIKVLL LK+K +  + H +  N Y++LDN+PFY+V     W  +     N +PR
Sbjct:  1881 AGIAGVIKVLLQLKHKTLFKSLHCEQLNPYIELDNSPFYVVQHNRPWAAIQDRQGNQLPR 1940

Query:   425 RAXXXXXXXXXXXXXXIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEF 484
             RA              ++EEYR     + +       R  +LSA+T + L+E    L+ F
Sbjct:  1941 RAGVSSFGFGGANAHVLLEEYRAPQVDRPLPATGA--RAFVLSARTPERLREAARRLVAF 1998

Query:   485 IIKE------KNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYL--NKKITN 536
             I         ++   L DLAYTLQVGR+AM+ R+A+  +S  DL ++L D+    K +  
Sbjct:  1999 IAARAHQDPLESQAYLDDLAYTLQVGRDAMQERVALLSDSLSDLQRQLDDFAATGKAVYR 2058

Query:   537 GI 538
             G+
Sbjct:  2059 GV 2060
GO:0030639 "polyketide biosynthetic process" evidence=IDA;TAS
UNIPROTKB|Q4KCD3 rzxF "Polyketide synthase RzxF" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KCD7 rzxC "Polyketide synthase RzxC" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KCD4 rzxE "Polyketide synthase RzxE" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|Q4KCD8 rzxB "Polyketide synthase/nonribosomal peptide synthetase hybrid RzxB" [Pseudomonas protegens Pf-5 (taxid:220664)] Back     alignment and assigned GO terms
UNIPROTKB|P96203 ppsD "Phthiocerol synthesis polyketide synthase type I PpsD" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
UNIPROTKB|Q7TXL7 ppsD "Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsD" [Mycobacterium bovis AF2122/97 (taxid:233413)] Back     alignment and assigned GO terms
UNIPROTKB|Q10978 ppsB "Phthiocerol synthesis polyketide synthase type I PpsB" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms
UNIPROTKB|Q7TXL9 ppsB "Phthiocerol/phenolphthiocerol synthesis polyketide synthase type I PpsB" [Mycobacterium bovis AF2122/97 (taxid:233413)] Back     alignment and assigned GO terms
UNIPROTKB|P96291 mas "Probable multifunctional mycocerosic acid synthase membrane-associated Mas" [Mycobacterium tuberculosis (taxid:1773)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software ?

No EC number assignment, probably not an enzyme!

Prediction of Functionally Associated Proteins

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query545
COG3321 1061 COG3321, COG3321, Polyketide synthase modules and 0.0
cd00833421 cd00833, PKS, polyketide synthases (PKSs) polymeri 0.0
smart00825298 smart00825, PKS_KS, Beta-ketoacyl synthase 1e-103
pfam00109243 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, 2e-87
TIGR02813 2582 TIGR02813, omega_3_PfaA, polyketide-type polyunsat 3e-76
cd00834406 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier prot 1e-51
cd00825332 cd00825, decarbox_cond_enzymes, decarboxylating co 2e-47
smart00825298 smart00825, PKS_KS, Beta-ketoacyl synthase 4e-42
cd00828407 cd00828, elong_cond_enzymes, "elongating" condensi 4e-39
COG0304412 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) sy 3e-38
pfam02801119 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase 3e-38
PRK05952381 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protei 1e-26
TIGR03150407 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protei 2e-26
PTZ00050421 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein 2e-25
PLN02836437 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protei 4e-22
PRK08722414 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protei 6e-22
PRK06333424 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protei 7e-22
PRK07314411 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protei 1e-21
PRK06501425 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protei 5e-21
cd00327254 cd00327, cond_enzymes, Condensing enzymes; Family 8e-20
PRK08439406 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protei 4e-18
PRK07103410 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl 1e-17
PRK09185392 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protei 4e-15
PLN02787540 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protei 8e-14
PRK14691342 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protei 1e-13
PRK07967406 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protei 1e-13
PRK09116405 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protei 1e-11
PRK07910418 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protei 2e-10
cd00832399 cd00832, CLF, Chain-length factor (CLF) is a facto 6e-09
pfam00108262 pfam00108, Thiolase_N, Thiolase, N-terminal domain 0.002
>gnl|CDD|225858 COG3321, COG3321, Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information 
 Score =  619 bits (1599), Expect = 0.0
 Identities = 232/535 (43%), Positives = 305/535 (57%), Gaps = 13/535 (2%)

Query: 11  DTNTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKV 70
               IAIIG+  +FPG+ +  +FW  L+   D ITEVP  RWD  A Y       GK+  
Sbjct: 2   LIEPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYS 61

Query: 71  KWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIF 130
           +WGGFL D D FDA FFGISP EAE MDPQ RL +E  W ALEDAG  P  L GS T +F
Sbjct: 62  RWGGFLDDVDDFDALFFGISPREAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVF 121

Query: 131 AGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSLIAI 190
           AG S ADY  +L          ++      + A R+SY+    GPS  +DTACSSSL+A+
Sbjct: 122 AGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGLSGPSVTVDTACSSSLVAV 181

Query: 191 NRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGV 250
           + A +SL L  CDLALAGGVN++ SP  +   S  G+LS +GRC  FD  A+GYVR EG 
Sbjct: 182 HLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGA 241

Query: 251 GVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINPY 310
           GV++LK L +A  D D IY + RG+  N  G S+  T+PN+ AQ  ++ +    A I+P 
Sbjct: 242 GVVVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPA 301

Query: 311 TINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASG 370
           T+ Y+EAHGTGT LGDPIE N L + + E             C +GSVK+NIGHLEAA+G
Sbjct: 302 TVQYVEAHGTGTPLGDPIEANALGAVYGEGAP-------AQPCAIGSVKSNIGHLEAAAG 354

Query: 371 VIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNNIPRRAGVSS 430
           + G+IK  L LK+  IP   H   PN  +  D++PF +  +   W       PRRAGVSS
Sbjct: 355 IAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEATPWP--TGGGPRRAGVSS 412

Query: 431 FGVGGSNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFIIKEKN 490
           FG GG+N HVI+EE     ++          R+++LSAKT + L      L + +  +  
Sbjct: 413 FGFGGTNAHVILEEAPPRAEST----IPSSPRLLVLSAKTAERLAATAPRLADRLELQGG 468

Query: 491 NFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNGIYTNFSKN 545
             SL D+AYTLQ GR   ++RLA+  N  E+L   L+ +   K           +
Sbjct: 469 LLSLADVAYTLQAGRPHFEHRLAVVANDREELEAGLRAFAAGKAKALSGVGADDS 523

Length = 1061
>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase Back     alignment and domain information
>gnl|CDD|215723 pfam00109, ketoacyl-synt, Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>gnl|CDD|234022 TIGR02813, omega_3_PfaA, polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>gnl|CDD|238430 cd00834, KAS_I_II, Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>gnl|CDD|238421 cd00825, decarbox_cond_enzymes, decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>gnl|CDD|214836 smart00825, PKS_KS, Beta-ketoacyl synthase Back     alignment and domain information
>gnl|CDD|238424 cd00828, elong_cond_enzymes, "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>gnl|CDD|217236 pfam02801, Ketoacyl-synt_C, Beta-ketoacyl synthase, C-terminal domain Back     alignment and domain information
>gnl|CDD|235653 PRK05952, PRK05952, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|200247 TIGR03150, fabF, beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>gnl|CDD|240245 PTZ00050, PTZ00050, 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>gnl|CDD|215449 PLN02836, PLN02836, 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>gnl|CDD|181539 PRK08722, PRK08722, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|235781 PRK06333, PRK06333, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|235987 PRK07314, PRK07314, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|235817 PRK06501, PRK06501, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>gnl|CDD|236265 PRK08439, PRK08439, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|180839 PRK07103, PRK07103, polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>gnl|CDD|236398 PRK09185, PRK09185, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>gnl|CDD|215421 PLN02787, PLN02787, 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>gnl|CDD|173154 PRK14691, PRK14691, 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>gnl|CDD|181184 PRK07967, PRK07967, 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>gnl|CDD|181657 PRK09116, PRK09116, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|236129 PRK07910, PRK07910, 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>gnl|CDD|238428 cd00832, CLF, Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>gnl|CDD|215722 pfam00108, Thiolase_N, Thiolase, N-terminal domain Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 545
COG3321 1061 Polyketide synthase modules and related proteins [ 100.0
TIGR02813 2582 omega_3_PfaA polyketide-type polyunsaturated fatty 100.0
KOG1202|consensus 2376 100.0
PRK08722414 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PRK06333424 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PLN02787540 3-oxoacyl-[acyl-carrier-protein] synthase II 100.0
PRK07910418 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PLN02836437 3-oxoacyl-[acyl-carrier-protein] synthase 100.0
cd00832399 CLF Chain-length factor (CLF) is a factor required 100.0
PRK07314411 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
cd00833421 PKS polyketide synthases (PKSs) polymerize simple 100.0
smart00825424 PKS_KS Beta-ketoacyl synthase. The structure of be 100.0
PRK07967406 3-oxoacyl-(acyl carrier protein) synthase I; Revie 100.0
KOG1394|consensus440 100.0
PRK08439406 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
TIGR03150407 fabF beta-ketoacyl-acyl-carrier-protein synthase I 100.0
PRK09116405 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
cd00834406 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) 100.0
cd00828407 elong_cond_enzymes "elongating" condensing enzymes 100.0
PTZ00050421 3-oxoacyl-acyl carrier protein synthase; Provision 100.0
PRK07103410 polyketide beta-ketoacyl:acyl carrier protein synt 100.0
PRK05952381 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
COG0304412 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Li 100.0
PRK06501425 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PRK14691342 3-oxoacyl-(acyl carrier protein) synthase II; Prov 100.0
PRK06519398 3-oxoacyl-(acyl carrier protein) synthase II; Revi 100.0
PRK09185392 3-oxoacyl-(acyl carrier protein) synthase I; Revie 100.0
PF00109254 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal 100.0
cd00825332 decarbox_cond_enzymes decarboxylating condensing e 100.0
PRK06147348 3-oxoacyl-(acyl carrier protein) synthase; Validat 100.0
cd00327254 cond_enzymes Condensing enzymes; Family of enzymes 100.0
PF02801119 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-termina 99.94
PRK05656393 acetyl-CoA acetyltransferase; Provisional 99.92
PRK06064389 acetyl-CoA acetyltransferase; Provisional 99.92
cd00751386 thiolase Thiolase are ubiquitous enzymes that cata 99.92
PRK07108392 acetyl-CoA acetyltransferase; Provisional 99.9
PRK12578385 acetyl-CoA acetyltransferase; Provisional 99.9
PRK06633392 acetyl-CoA acetyltransferase; Provisional 99.9
PRK09051394 beta-ketothiolase; Provisional 99.89
PRK08242402 acetyl-CoA acetyltransferase; Validated 99.89
TIGR01930386 AcCoA-C-Actrans acetyl-CoA acetyltransferases. Thi 99.89
PRK07661391 acetyl-CoA acetyltransferase; Provisional 99.89
PRK07516389 acetyl-CoA acetyltransferase; Provisional 99.88
PRK13359400 beta-ketoadipyl CoA thiolase; Provisional 99.88
PLN02644394 acetyl-CoA C-acetyltransferase 99.88
PLN02287452 3-ketoacyl-CoA thiolase 99.88
TIGR02430400 pcaF beta-ketoadipyl CoA thiolase. Members of this 99.88
PRK09052399 acetyl-CoA acetyltransferase; Provisional 99.88
PRK05790393 putative acyltransferase; Provisional 99.87
PRK07851406 acetyl-CoA acetyltransferase; Provisional 99.87
PRK06954397 acetyl-CoA acetyltransferase; Provisional 99.86
PRK06445394 acetyl-CoA acetyltransferase; Provisional 99.86
PRK08235393 acetyl-CoA acetyltransferase; Provisional 99.86
PRK06205404 acetyl-CoA acetyltransferase; Provisional 99.86
PRK09050401 beta-ketoadipyl CoA thiolase; Validated 99.86
PRK08256391 lipid-transfer protein; Provisional 99.86
cd00829375 SCP-x_thiolase Thiolase domain associated with ste 99.86
PRK08131401 acetyl-CoA acetyltransferase; Provisional 99.86
PRK08947387 fadA 3-ketoacyl-CoA thiolase; Reviewed 99.85
PRK06158384 thiolase; Provisional 99.85
PRK06365430 acetyl-CoA acetyltransferase; Provisional 99.85
PRK08142388 acetyl-CoA acetyltransferase; Provisional 99.85
PRK06366388 acetyl-CoA acetyltransferase; Provisional 99.85
TIGR02445385 fadA fatty oxidation complex, beta subunit FadA. T 99.84
PTZ00455438 3-ketoacyl-CoA thiolase; Provisional 99.84
PRK07850387 acetyl-CoA acetyltransferase; Provisional 99.84
PRK06059399 lipid-transfer protein; Provisional 99.84
PRK06157398 acetyl-CoA acetyltransferase; Validated 99.84
PRK07801382 acetyl-CoA acetyltransferase; Provisional 99.83
PRK06065392 acetyl-CoA acetyltransferase; Provisional 99.83
PRK08313386 acetyl-CoA acetyltransferase; Provisional 99.83
PRK06289403 acetyl-CoA acetyltransferase; Provisional 99.83
PRK08963428 fadI 3-ketoacyl-CoA thiolase; Reviewed 99.83
PRK06504390 acetyl-CoA acetyltransferase; Provisional 99.82
TIGR02446430 FadI fatty oxidation complex, beta subunit FadI. T 99.82
PRK06025417 acetyl-CoA acetyltransferase; Provisional 99.82
PRK07515372 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.82
PRK08170426 acetyl-CoA acetyltransferase; Provisional 99.8
cd00826393 nondecarbox_cond_enzymes nondecarboxylating conden 99.8
KOG1390|consensus396 99.79
PRK09268427 acetyl-CoA acetyltransferase; Provisional 99.79
PRK06690361 acetyl-CoA acetyltransferase; Provisional 99.78
PRK06066385 acetyl-CoA acetyltransferase; Provisional 99.78
PRK07204329 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.76
PRK09352319 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.73
PRK07855386 lipid-transfer protein; Provisional 99.72
PRK07937352 lipid-transfer protein; Provisional 99.71
COG0332323 FabH 3-oxoacyl-[acyl-carrier-protein] 99.71
PRK08257498 acetyl-CoA acetyltransferase; Validated 99.7
TIGR00747318 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III 99.69
PRK12879325 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.67
PRK06816378 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.67
cd00830320 KAS_III Ketoacyl-acyl carrier protein synthase III 99.63
KOG1389|consensus435 99.63
PRK09258338 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.63
KOG1406|consensus408 99.62
CHL00203326 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Pr 99.61
PLN02326379 3-oxoacyl-[acyl-carrier-protein] synthase III 99.59
KOG1391|consensus396 99.56
PRK06840339 hypothetical protein; Validated 99.51
TIGR00748345 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase 99.5
cd00827324 init_cond_enzymes "initiating" condensing enzymes 99.48
PRK04262347 hypothetical protein; Provisional 99.47
PRK05963326 3-oxoacyl-(acyl carrier protein) synthase II; Revi 99.45
TIGR02845327 spore_V_AD stage V sporulation protein AD. Bacillu 99.4
cd00831361 CHS_like Chalcone and stilbene synthases; plant-sp 99.38
PRK12880353 3-oxoacyl-(acyl carrier protein) synthase III; Rev 99.37
KOG1392|consensus465 99.36
COG0183392 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolis 99.35
PLN03172393 chalcone synthase family protein; Provisional 99.34
PLN03169391 chalcone synthase family protein; Provisional 99.34
PLN03171399 chalcone synthase-like protein; Provisional 99.33
PLN03170401 chalcone synthase; Provisional 99.3
PRK08304337 stage V sporulation protein AD; Validated 99.25
TIGR01835379 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synt 99.22
PLN03173391 chalcone synthase; Provisional 99.22
PLN03168389 chalcone synthase; Provisional 99.16
PRK12404334 stage V sporulation protein AD; Provisional 99.1
PLN02854521 3-ketoacyl-CoA synthase 98.93
PLN02377502 3-ketoacyl-CoA synthase 98.91
PF00108264 Thiolase_N: Thiolase, N-terminal domain; InterPro: 98.89
PLN02577459 hydroxymethylglutaryl-CoA synthase 98.89
COG3425377 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipi 98.84
PLN02932478 3-ketoacyl-CoA synthase 98.79
TIGR01833454 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synth 98.68
PLN02192511 3-ketoacyl-CoA synthase 98.55
PF02803123 Thiolase_C: Thiolase, C-terminal domain; InterPro: 98.49
PF13723218 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-termina 98.3
PF08392290 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase- 98.12
PF0854580 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP) 98.05
PLN00415466 3-ketoacyl-CoA synthase 98.0
COG3424356 BcsA Predicted naringenin-chalcone synthase [Secon 98.0
PF07451329 SpoVAD: Stage V sporulation protein AD (SpoVAD); I 97.8
PF00195226 Chal_sti_synt_N: Chalcone and stilbene synthases, 97.58
PF01154174 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A s 96.39
PF0854190 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (AC 94.58
TIGR02816 538 pfaB_fam PfaB family protein. The protein PfaB is 84.17
>COG3321 Polyketide synthase modules and related proteins [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information 
Probab=100.00  E-value=2.1e-115  Score=998.37  Aligned_cols=516  Identities=45%  Similarity=0.718  Sum_probs=477.5

Q ss_pred             CcEEEEeeeeecCCCCCHHHHHHHHHcCCcceeeCCCCCCccccccCCCCCCCCCccceeeeeecccccCCcccCCCCHH
Q psy613           13 NTIAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKVKWGGFLYDADCFDANFFGISPA   92 (545)
Q Consensus        13 ~~iaIvG~g~~~P~~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~fD~~~f~i~~~   92 (545)
                      .+||||||+|+|||++++++||++|.+|+++|+++|++||+++.+|++....+++.++++|||+++++.||+.||||+|+
T Consensus         4 ~~IAIiGm~~rfPga~~~~~~W~~l~~g~~~i~~ip~~rwd~~~~~~~~~~~~gk~~~~~ggfl~~~~~FD~~fFgisPr   83 (1061)
T COG3321           4 EPIAIIGMACRFPGADSPEEFWDLLKEGRDEITEVPADRWDVDAYYDPDPTVPGKSYSRWGGFLDDVDDFDALFFGISPR   83 (1061)
T ss_pred             CcEEEEeccccCCCCCCHHHHHHHHhcCCceeeecChhhhhHhhccCCccccccccccccccccCCccccCHHHcCCCHH
Confidence            34999999999999999999999999999999999999999999999988889999999999999999999999999999


Q ss_pred             HHhhCCHHHHHHHHHHHHHHHHCCCCCCCCCCCeEEEEEccChhhHHHHHHHHhhcCcccccCCCchhhhhhHhhhhcCC
Q psy613           93 EAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNF  172 (545)
Q Consensus        93 ea~~mdp~~rl~l~aa~~ALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ris~~lgl  172 (545)
                      |+..|||||||+|+++|+|||||||.++.+.++.+|||+|.+..+|.................++..+++++||||.|||
T Consensus        84 EA~~mDPQqRllLe~aw~AlEdAG~~~~~l~g~~tgV~~g~~~~~y~~~~~~~~~~~~~~~~~g~~~~~~a~Risy~l~l  163 (1061)
T COG3321          84 EAEAMDPQQRLLLEVAWEALEDAGIYPDSLRGSATGVFAGASVADYLLLLLADDEAEPEYAITGNSSSVAAGRISYVLGL  163 (1061)
T ss_pred             HHHhcCchHhHHHHHHHHHHHHcCCCccccCCcceEEEEeeccCccccccccccccccceecccchhhHHHHHHHHHhcC
Confidence            99999999999999999999999999999999999999999999997654322112233344556778899999999999


Q ss_pred             CCceeeccCccchHHHHHHHHHHHHhcCCCCEEEEeccccccChHHHHHHhhcCCCCCCCCCCCccCCCCCcccccceEE
Q psy613          173 HGPSEVIDTACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRSEGVGV  252 (545)
Q Consensus       173 ~Gp~~tv~~aCsSsl~Al~~A~~~I~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~pfd~~a~G~~~gEGaaa  252 (545)
                      +||+++|+|+|||||+|+|+||++|++|+||+||+|||+...+|...+.+++.|+||++|+|++||.++|||++|||+|+
T Consensus       164 ~GPs~~vdtaCSSsLvAvhlA~~sL~~Ge~d~alaGgv~l~~~p~~~~~~~~~g~ls~~g~c~~fd~~adG~v~geG~g~  243 (1061)
T COG3321         164 SGPSVTVDTACSSSLVAVHLACQSLRLGECDLALAGGVNLVLSPESSYLFSAGGMLSPDGRCKAFDADADGYVRGEGAGV  243 (1061)
T ss_pred             CCCCccccchhhHHHHHHHHHHHHHHcCCCCEEEecceEeccCCcceeeeecccCcCCCCcceecccCCCCEEEeeeEEE
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             EEEcchhhhhhcCCcEEEEEEeeeeccCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCccEEEeccCCCCCCCHHHHHH
Q psy613          253 ILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINPYTINYIEAHGTGTKLGDPIEVNG  332 (545)
Q Consensus       253 vvL~~~~~A~~~g~~i~a~I~g~~~~~~g~~~~~~~p~~~~~~~~i~~al~~Agi~~~dId~ve~hgtgT~~gD~~E~~a  332 (545)
                      ||||++++|++|||+|||+|+|+++|+||.+.++++|+..+|.+++++||+++||+|++|+|||+|||||++||++|+++
T Consensus       244 vvLKrl~~A~~dgd~IyavI~gsavn~dG~~~gltaP~~~aQ~~v~~~al~~a~i~p~tv~yvEaHgTGT~lGDpiE~~a  323 (1061)
T COG3321         244 VVLKRLSDAERDGDRIYAVIRGSAVNQDGRSNGLTAPNLEAQADVIREALADAGIDPATVQYVEAHGTGTPLGDPIEANA  323 (1061)
T ss_pred             EEEEEhHHHHhCCCeEEEEEEeeeeccCCCcCCCCCCCHHHHHHHHHHHHHhcCCCcccCcEEEecCCCCCCcCHHHHHH
Confidence            99999999999999999999999999999888999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhcccccCCCCCCCceeecCcccCCCcccchhhHHHHHHHHHhHhcCcccCCCCCCCCCCCCCCCCCCeeeeccc
Q psy613          333 LKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKT  412 (545)
Q Consensus       333 l~~~f~~~~~~~~~~~~~~~~~igs~K~~iGH~~~AsG~~~lik~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~~~~~~  412 (545)
                      |.++|+...       ...+|.|||+|+||||++.|+|++++||++|+|+|++|||++||++|||.++|+.+||+++++.
T Consensus       324 L~~v~~~~~-------~~~~c~iGSvKsNiGH~~~AaGiagliK~~Lal~~~~ip~~l~~~~~np~i~~~~sp~~v~~~~  396 (1061)
T COG3321         324 LGAVYGEGA-------PAQPCAIGSVKSNIGHLEAAAGIAGLIKTALALKHGYIPPTLHFDTPNPEIDFDSSPFVVPTEA  396 (1061)
T ss_pred             HHHHhccCC-------CCCcccccccccccccHHHHHHHHHHHHHHHhhhcCccCCcCCCCCCCcCCccccCCeEeecCC
Confidence            999998632       3567999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccCCCCceEEeecccCCCCceEEEEEccccccccccccccccceEEEEEEecCCHHHHHHHHHHHHHHHHhcCCCC
Q psy613          413 CDWIQLDNNIPRRAGVSSFGVGGSNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFIIKEKNNF  492 (545)
Q Consensus       413 ~~w~~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~l~~~sa~~~~~l~~~~~~l~~~l~~~~~~~  492 (545)
                      ++|+...  .||||+||||||||||+|+||||+++..  ....  ...+++|+|||+++.+|+.++.+|++|+..+....
T Consensus       397 ~~W~~~~--~prrAgvssfG~gGtNaHvIlEe~~~~~--~~~~--~~~p~~l~lSAk~~~~L~~~a~~l~~~l~~~~~~~  470 (1061)
T COG3321         397 TPWPTGG--GPRRAGVSSFGFGGTNAHVILEEAPPRA--ESTI--PSSPRLLVLSAKTAERLAATAPRLADRLELQGGLL  470 (1061)
T ss_pred             cCCCCCC--CCceeeeeccCCCCCceEEEEeecCCcc--cCCC--CCCCceeeeecCCHHHHHHHHHHHHHHHHhCcccc
Confidence            9998643  7999999999999999999999998711  1111  11237899999999999999999999998775433


Q ss_pred             CHHHHHHHHHhcCCCCCceEEEEEcCHHHHHHHHHHHHccCcCCceeec
Q psy613          493 SLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNGIYTN  541 (545)
Q Consensus       493 ~~~~~a~tl~~~r~~~~~r~~~~~~~~~~l~~~l~~~~~~~~~~~i~~~  541 (545)
                      ++.|+||||+.+|.++++|.++|++|++||.++|+.+..++...+.+.+
T Consensus       471 ~l~dia~Tl~~gR~~~~~R~~~va~~~eel~~~L~~~~~~~~~~~~~~~  519 (1061)
T COG3321         471 SLADVAYTLQAGRPHFEHRLAVVANDREELEAGLRAFAAGKAKALSGVG  519 (1061)
T ss_pred             hHHHHHHHHHhhhhhccceeEEEeCCHHHHHHHHHHHhcCCCCccceec
Confidence            8999999999999999999999999999999999999998765554443

>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA Back     alignment and domain information
>KOG1202|consensus Back     alignment and domain information
>PRK08722 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK06333 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02787 3-oxoacyl-[acyl-carrier-protein] synthase II Back     alignment and domain information
>PRK07910 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PLN02836 3-oxoacyl-[acyl-carrier-protein] synthase Back     alignment and domain information
>cd00832 CLF Chain-length factor (CLF) is a factor required for polyketide chain initiation of aromatic antibiotic-producing polyketide synthases (PKSs) of filamentous bacteria Back     alignment and domain information
>PRK07314 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00833 PKS polyketide synthases (PKSs) polymerize simple fatty acids into a large variety of different products, called polyketides, by successive decarboxylating Claisen condensations Back     alignment and domain information
>smart00825 PKS_KS Beta-ketoacyl synthase Back     alignment and domain information
>PRK07967 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>KOG1394|consensus Back     alignment and domain information
>PRK08439 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>TIGR03150 fabF beta-ketoacyl-acyl-carrier-protein synthase II Back     alignment and domain information
>PRK09116 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>cd00834 KAS_I_II Beta-ketoacyl-acyl carrier protein (ACP) synthase (KAS), type I and II Back     alignment and domain information
>cd00828 elong_cond_enzymes "elongating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type I and II and polyketide synthases Back     alignment and domain information
>PTZ00050 3-oxoacyl-acyl carrier protein synthase; Provisional Back     alignment and domain information
>PRK07103 polyketide beta-ketoacyl:acyl carrier protein synthase; Validated Back     alignment and domain information
>PRK05952 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>COG0304 FabB 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid metabolism / Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PRK06501 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK14691 3-oxoacyl-(acyl carrier protein) synthase II; Provisional Back     alignment and domain information
>PRK06519 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>PRK09185 3-oxoacyl-(acyl carrier protein) synthase I; Reviewed Back     alignment and domain information
>PF00109 ketoacyl-synt: Beta-ketoacyl synthase, N-terminal domain; InterPro: IPR014030 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>cd00825 decarbox_cond_enzymes decarboxylating condensing enzymes; Family of enzymes that catalyze the formation of a new carbon-carbon bond by a decarboxylating Claisen-like condensation reaction Back     alignment and domain information
>PRK06147 3-oxoacyl-(acyl carrier protein) synthase; Validated Back     alignment and domain information
>cd00327 cond_enzymes Condensing enzymes; Family of enzymes that catalyze a (decarboxylating or non-decarboxylating) Claisen-like condensation reaction Back     alignment and domain information
>PF02801 Ketoacyl-synt_C: Beta-ketoacyl synthase, C-terminal domain; InterPro: IPR014031 Beta-ketoacyl-ACP synthase 2 Back     alignment and domain information
>PRK05656 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06064 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00751 thiolase Thiolase are ubiquitous enzymes that catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>PRK07108 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK12578 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06633 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09051 beta-ketothiolase; Provisional Back     alignment and domain information
>PRK08242 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>TIGR01930 AcCoA-C-Actrans acetyl-CoA acetyltransferases Back     alignment and domain information
>PRK07661 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07516 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK13359 beta-ketoadipyl CoA thiolase; Provisional Back     alignment and domain information
>PLN02644 acetyl-CoA C-acetyltransferase Back     alignment and domain information
>PLN02287 3-ketoacyl-CoA thiolase Back     alignment and domain information
>TIGR02430 pcaF beta-ketoadipyl CoA thiolase Back     alignment and domain information
>PRK09052 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK05790 putative acyltransferase; Provisional Back     alignment and domain information
>PRK07851 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06954 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06445 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08235 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06205 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK09050 beta-ketoadipyl CoA thiolase; Validated Back     alignment and domain information
>PRK08256 lipid-transfer protein; Provisional Back     alignment and domain information
>cd00829 SCP-x_thiolase Thiolase domain associated with sterol carrier protein (SCP)-x isoform and related proteins; SCP-2 has multiple roles in intracellular lipid circulation and metabolism Back     alignment and domain information
>PRK08131 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08947 fadA 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK06158 thiolase; Provisional Back     alignment and domain information
>PRK06365 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08142 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06366 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02445 fadA fatty oxidation complex, beta subunit FadA Back     alignment and domain information
>PTZ00455 3-ketoacyl-CoA thiolase; Provisional Back     alignment and domain information
>PRK07850 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06059 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK06157 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>PRK07801 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06065 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08313 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06289 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK08963 fadI 3-ketoacyl-CoA thiolase; Reviewed Back     alignment and domain information
>PRK06504 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>TIGR02446 FadI fatty oxidation complex, beta subunit FadI Back     alignment and domain information
>PRK06025 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07515 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK08170 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>cd00826 nondecarbox_cond_enzymes nondecarboxylating condensing enzymes; In general, thiolases catalyze the reversible thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and acetyl-CoA, a 2-step reaction involving a covalent intermediate formed with a catalytic cysteine Back     alignment and domain information
>KOG1390|consensus Back     alignment and domain information
>PRK09268 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06690 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK06066 acetyl-CoA acetyltransferase; Provisional Back     alignment and domain information
>PRK07204 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK09352 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK07855 lipid-transfer protein; Provisional Back     alignment and domain information
>PRK07937 lipid-transfer protein; Provisional Back     alignment and domain information
>COG0332 FabH 3-oxoacyl-[acyl-carrier-protein] Back     alignment and domain information
>PRK08257 acetyl-CoA acetyltransferase; Validated Back     alignment and domain information
>TIGR00747 fabH 3-oxoacyl-(acyl-carrier-protein) synthase III Back     alignment and domain information
>PRK12879 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>PRK06816 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>cd00830 KAS_III Ketoacyl-acyl carrier protein synthase III (KASIII) initiates the elongation in type II fatty acid synthase systems Back     alignment and domain information
>KOG1389|consensus Back     alignment and domain information
>PRK09258 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>KOG1406|consensus Back     alignment and domain information
>CHL00203 fabH 3-oxoacyl-acyl-carrier-protein synthase 3; Provisional Back     alignment and domain information
>PLN02326 3-oxoacyl-[acyl-carrier-protein] synthase III Back     alignment and domain information
>KOG1391|consensus Back     alignment and domain information
>PRK06840 hypothetical protein; Validated Back     alignment and domain information
>TIGR00748 HMG_CoA_syn_Arc hydroxymethylglutaryl-CoA synthase, putative Back     alignment and domain information
>cd00827 init_cond_enzymes "initiating" condensing enzymes are a subclass of decarboxylating condensing enzymes, including beta-ketoacyl [ACP] synthase, type III and polyketide synthases, type III, which include chalcone synthase and related enzymes Back     alignment and domain information
>PRK04262 hypothetical protein; Provisional Back     alignment and domain information
>PRK05963 3-oxoacyl-(acyl carrier protein) synthase II; Reviewed Back     alignment and domain information
>TIGR02845 spore_V_AD stage V sporulation protein AD Back     alignment and domain information
>cd00831 CHS_like Chalcone and stilbene synthases; plant-specific polyketide synthases (PKS) and related enzymes, also called type III PKSs Back     alignment and domain information
>PRK12880 3-oxoacyl-(acyl carrier protein) synthase III; Reviewed Back     alignment and domain information
>KOG1392|consensus Back     alignment and domain information
>COG0183 PaaJ Acetyl-CoA acetyltransferase [Lipid metabolism] Back     alignment and domain information
>PLN03172 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03169 chalcone synthase family protein; Provisional Back     alignment and domain information
>PLN03171 chalcone synthase-like protein; Provisional Back     alignment and domain information
>PLN03170 chalcone synthase; Provisional Back     alignment and domain information
>PRK08304 stage V sporulation protein AD; Validated Back     alignment and domain information
>TIGR01835 HMG-CoA-S_prok 3-hydroxy-3-methylglutaryl CoA synthase, prokaryotic clade Back     alignment and domain information
>PLN03173 chalcone synthase; Provisional Back     alignment and domain information
>PLN03168 chalcone synthase; Provisional Back     alignment and domain information
>PRK12404 stage V sporulation protein AD; Provisional Back     alignment and domain information
>PLN02854 3-ketoacyl-CoA synthase Back     alignment and domain information
>PLN02377 3-ketoacyl-CoA synthase Back     alignment and domain information
>PF00108 Thiolase_N: Thiolase, N-terminal domain; InterPro: IPR020616 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PLN02577 hydroxymethylglutaryl-CoA synthase Back     alignment and domain information
>COG3425 PksG 3-hydroxy-3-methylglutaryl CoA synthase [Lipid metabolism] Back     alignment and domain information
>PLN02932 3-ketoacyl-CoA synthase Back     alignment and domain information
>TIGR01833 HMG-CoA-S_euk 3-hydroxy-3-methylglutaryl-CoA-synthase, eukaryotic clade Back     alignment and domain information
>PLN02192 3-ketoacyl-CoA synthase Back     alignment and domain information
>PF02803 Thiolase_C: Thiolase, C-terminal domain; InterPro: IPR020617 Two different types of thiolase [, , ] are found both in eukaryotes and in prokaryotes: acetoacetyl-CoA thiolase (2 Back     alignment and domain information
>PF13723 Ketoacyl-synt_2: Beta-ketoacyl synthase, N-terminal domain Back     alignment and domain information
>PF08392 FAE1_CUT1_RppA: FAE1/Type III polyketide synthase-like protein; InterPro: IPR013601 This domain is found in proteins that are described as 3-ketoacyl-CoA synthases, type III polyketide synthases, fatty acid elongases and fatty acid condensing enzymes, and are found in both prokaryotic and eukaryotic (mainly plant) species Back     alignment and domain information
>PF08545 ACP_syn_III: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III; InterPro: IPR013751 Fatty acid synthesis (FAS) is a vital aspect of cellular physiology which can occur by two distinct pathways Back     alignment and domain information
>PLN00415 3-ketoacyl-CoA synthase Back     alignment and domain information
>COG3424 BcsA Predicted naringenin-chalcone synthase [Secondary metabolites biosynthesis, transport, and catabolism] Back     alignment and domain information
>PF07451 SpoVAD: Stage V sporulation protein AD (SpoVAD); InterPro: IPR010894 This family contains the bacterial stage V sporulation protein AD (SpoVAD), which is approximately 340 residues long Back     alignment and domain information
>PF00195 Chal_sti_synt_N: Chalcone and stilbene synthases, N-terminal domain; InterPro: IPR001099 Synonym(s): Chalcone synthase, Flavonone synthase, 6'-deoxychalcone synthase Naringenin-chalcone synthases (2 Back     alignment and domain information
>PF01154 HMG_CoA_synt_N: Hydroxymethylglutaryl-coenzyme A synthase N terminal; InterPro: IPR013528 Synonym(s): 3-hydroxy-3-methylglutaryl-coenzyme A synthase, HMG-CoA synthase Back     alignment and domain information
>PF08541 ACP_syn_III_C: 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal ; InterPro: IPR013747 This domain is found on 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III 2 Back     alignment and domain information
>TIGR02816 pfaB_fam PfaB family protein Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query545
2hg4_A 917 Structure Of The Ketosynthase-acyltransferase Didom 3e-77
2qo3_A 915 Crystal Structure Of [ks3][at3] Didomain From Modul 4e-74
3hhd_A 965 Structure Of The Human Fatty Acid Synthase Ks-Mat D 2e-67
2vz8_A 2512 Crystal Structure Of Mammalian Fatty Acid Synthase 6e-67
1j3n_A408 Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protei 1e-22
1e5m_A416 Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kas 3e-21
2iwy_A438 Human Mitochondrial Beta-ketoacyl Acp Synthase Leng 4e-20
2c9h_A444 Structure Of Mitochondrial Beta-Ketoacyl Synthase L 7e-19
1b3n_A412 Beta-Ketoacyl Carrier Protein Synthase As A Drug Ta 8e-18
2gfw_A427 Structure Of Wild Type E. Coli Fabf (Kasii) Length 1e-17
2gqd_A437 The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii 2e-17
2gfy_A427 Structure Of E. Coli Fabf(K335a) Mutant With Covale 4e-17
3hnz_A427 Structure Of E. Coli Fabf(C163a) In Complex With Pl 2e-16
2gfv_A427 Structure Of E. Coli Fabf (Kasii) C163q Mutant Leng 3e-16
1tqy_A424 The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le 1e-15
1w0i_A431 Arabidopsis Thaliana Mitochondrial Kas Length = 431 1e-15
3kzu_A428 Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei 4e-15
3e60_A424 Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protei 6e-15
4ddo_A451 Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei 2e-14
4f32_A451 Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protei 5e-13
4ewg_A412 Crystal Structure Of A Beta-Ketoacyl Synthase From 2e-12
2gp6_A434 X-Ray Crystal Structure Of Mycobacterium Tuberculos 6e-12
1ox0_A430 The Crystal Structure Of Beta-Ketoacyl-[acyl Carrie 2e-11
1fj4_A406 The Structure Of Beta-Ketoacyl-[acyl Carrier Protei 3e-11
2rjt_A428 Crystal Structure Analysis Of A Surface Entropy Red 3e-11
1dd8_A406 Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Pr 3e-11
3o04_A413 Crystal Structure Of The Beta-Keto-Acyl Carrier Pro 5e-11
1h4f_A406 E. Coli Beta-Ketoacyl [acyl Carrier Protein] Syntha 5e-11
2byw_A418 Structure Of Escherichia Coli Beta-Ketoacyl (Acyl C 1e-10
2byz_A418 Structure Of E. Coli Kas I H298q Mutant In Complex 3e-10
2alm_A431 Crystal Structure Analysis Of A Mutant Beta-Ketoacy 3e-10
2byy_A418 E. Coli Kas I H298e Mutation Length = 418 3e-10
3u0f_A411 The Structure Of Beta-Ketoacyl Synthase From Brucel 4e-10
3lrf_A428 Crystal Structure Of Beta-Ketoacyl Synthase From Br 5e-10
2wgd_A416 Crystal Structure Of Kasa Of Mycobacterium Tubercul 8e-08
1f91_A406 Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In 2e-07
2vb7_C406 Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Ap 2e-07
1ek4_A418 Beta-Ketoacyl [acyl Carrier Protein] Synthase I In 2e-07
3oyt_A410 1.84 Angstrom Resolution Crystal Structure Of 3-Oxo 1e-06
2wgf_A416 Crystal Structure Of Mycobacterium Tuberculosis C17 2e-06
1tqy_B415 The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Le 5e-06
3zen_D3089 Cryo-em Structure Of The Mycobacterial Fatty Acid S 1e-05
>pdb|2HG4|A Chain A, Structure Of The Ketosynthase-acyltransferase Didomain Of Module 5 From Debs. Length = 917 Back     alignment and structure 
Iteration: 1

 Score =  286 bits (731), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 179/544 (32%), Positives = 276/544 (50%), Gaps = 24/544 (4%)
Query: 3   KLNSLEDIDTNTIAIIGIGGKFPGS-KNINDFWRKLENNEDAITEVPTSRWDWKAIYGDP 61
           +L  +E      IAI+G   +FPG   +   FW  +    DAI E P  R  W+    DP
Sbjct: 29  RLREVEHRAGEPIAIVGXACRFPGDVDSPESFWEFVSGGGDAIAEAPADR-GWEP---DP 84
Query: 62  HLESGKTKVKWGGFLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSK 121
                    + GG L  A  FDA FFGISP EA   DPQ R+ +E +W ALE AG+ P  
Sbjct: 85  -------DARLGGXLAAAGDFDAGFFGISPREALAXDPQQRIXLEISWEALERAGHDPVS 137
Query: 122 LSGSKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDT 181
           L GS T +F GV T DY    +EA  + L          + + RV+Y     GP+  +DT
Sbjct: 138 LRGSATGVFTGVGTVDYGPRPDEAPDEVLGYVGTGTASSVASGRVAYCLGLEGPAXTVDT 197
Query: 182 ACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRA 241
           ACSS L A++ A ESL    C LALAGGV + +SP         G L+ +GRC  F + A
Sbjct: 198 ACSSGLTALHLAXESLRRDECGLALAGGVTVXSSPGAFTEFRSQGGLAADGRCKPFSKAA 257
Query: 242 NGYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDV 301
           +G+  +EG GV++L+ L  A  +   +  + RG+  N  G S+  T+P+  AQ++++   
Sbjct: 258 DGFGLAEGAGVLVLQRLSAARREGRPVLAVLRGSAVNQDGASNGLTAPSGPAQQRVIRRA 317
Query: 302 YRRANINPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKAN 361
              A +    ++Y+EAHGTGT+LGDPIEV+ L S +    +    PL      +GSVK+N
Sbjct: 318 LENAGVRAGDVDYVEAHGTGTRLGDPIEVHALLSTYGAERD-PDDPLW-----IGSVKSN 371
Query: 362 IGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNN 421
           IGH +AA+GV GV K +L L++ + P   H   P+  ++ D     +V++   W   +  
Sbjct: 372 IGHTQAAAGVAGVXKAVLALRHGEXPRTLHFDEPSPQIEWDLGAVSVVSQARSWPAGER- 430
Query: 422 IPRRAXXXXXXXXXXXXXXIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILL 481
            PRRA              I+EE  +  + +   ++  +   ++LS + +++ +     L
Sbjct: 431 -PRRAGVSSFGISGTNAHVIVEEAPEADEPEPAPDSGPV--PLVLSGRDEQAXRAQAGRL 487
Query: 482 LEFIIKEKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNGIYTN 541
            + + +E  N SL D  +TL   R A ++R A+ V   ++ +  L+   + +I +   T 
Sbjct: 488 ADHLAREPRN-SLRDTGFTLATRRSAWEHR-AVVVGDRDEALAGLRAVADGRIADRTATG 545
Query: 542 FSKN 545
            ++ 
Sbjct: 546 QART 549
>pdb|2QO3|A Chain A, Crystal Structure Of [ks3][at3] Didomain From Module 3 Of 6- Deoxyerthronolide B Synthase Length = 915 Back     alignment and structure
>pdb|3HHD|A Chain A, Structure Of The Human Fatty Acid Synthase Ks-Mat Didomain As A Framework For Inhibitor Design. Length = 965 Back     alignment and structure
>pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 Back     alignment and structure
>pdb|1J3N|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl-Carrier Protein) Synthase Ii From Thermus Thermophilus Hb8 Length = 408 Back     alignment and structure
>pdb|1E5M|A Chain A, Beta Ketoacyl Acyl Carrier Protein Synthase Ii (Kasii) From Synechocystis Sp Length = 416 Back     alignment and structure
>pdb|2IWY|A Chain A, Human Mitochondrial Beta-ketoacyl Acp Synthase Length = 438 Back     alignment and structure
>pdb|2C9H|A Chain A, Structure Of Mitochondrial Beta-Ketoacyl Synthase Length = 444 Back     alignment and structure
>pdb|1B3N|A Chain A, Beta-Ketoacyl Carrier Protein Synthase As A Drug Target, Implications From The Crystal Structure Of A Complex With The Inhibitor Cerulenin. Length = 412 Back     alignment and structure
>pdb|2GFW|A Chain A, Structure Of Wild Type E. Coli Fabf (Kasii) Length = 427 Back     alignment and structure
>pdb|2GQD|A Chain A, The Crystal Structure Of B-Ketoacyl-Acp Synthase Ii (Fabf) From Staphylococcus Aureus Length = 437 Back     alignment and structure
>pdb|2GFY|A Chain A, Structure Of E. Coli Fabf(K335a) Mutant With Covalently Linked Dodecanoic Acid Length = 427 Back     alignment and structure
>pdb|3HNZ|A Chain A, Structure Of E. Coli Fabf(C163a) In Complex With Platensimycin Length = 427 Back     alignment and structure
>pdb|2GFV|A Chain A, Structure Of E. Coli Fabf (Kasii) C163q Mutant Length = 427 Back     alignment and structure
>pdb|1TQY|A Chain A, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 424 Back     alignment and structure
>pdb|1W0I|A Chain A, Arabidopsis Thaliana Mitochondrial Kas Length = 431 Back     alignment and structure
>pdb|3KZU|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Brucella Melitensis Length = 428 Back     alignment and structure
>pdb|3E60|A Chain A, Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase Ii From Bartonella Henselae Length = 424 Back     alignment and structure
>pdb|4DDO|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis Length = 451 Back     alignment and structure
>pdb|4F32|A Chain A, Crystal Structure Of 3-Oxoacyl-[acyl-Carrier-Protein] Synthase Ii From Burkholderia Vietnamiensis In Complex With Platencin Length = 451 Back     alignment and structure
>pdb|4EWG|A Chain A, Crystal Structure Of A Beta-Ketoacyl Synthase From Burkholderia Phymatum Stm815 Length = 412 Back     alignment and structure
>pdb|2GP6|A Chain A, X-Ray Crystal Structure Of Mycobacterium Tuberculosis Beta- Ketoacyl Acyl Carrier Protein Synthase Ii (Mtkasb) Length = 434 Back     alignment and structure
>pdb|1OX0|A Chain A, The Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 430 Back     alignment and structure
>pdb|1FJ4|A Chain A, The Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I In Complex With Thiolactomycin, Implications For Drug Design Length = 406 Back     alignment and structure
>pdb|2RJT|A Chain A, Crystal Structure Analysis Of A Surface Entropy Reduction Mutant Of S. Pneumoniae Fabf Length = 428 Back     alignment and structure
>pdb|1DD8|A Chain A, Crystal Structure Of Beta-Ketoacyl-[acyl Carrier Protein] Synthase I From Escherichia Coli Length = 406 Back     alignment and structure
>pdb|3O04|A Chain A, Crystal Structure Of The Beta-Keto-Acyl Carrier Protein Synthase Ii (Lmo2201) From Listeria Monocytogenes Length = 413 Back     alignment and structure
>pdb|1H4F|A Chain A, E. Coli Beta-Ketoacyl [acyl Carrier Protein] Synthase I K328r Length = 406 Back     alignment and structure
>pdb|2BYW|A Chain A, Structure Of Escherichia Coli Beta-Ketoacyl (Acyl Carrier Protein) Synthase I Lys328ala Mutant Length = 418 Back     alignment and structure
>pdb|2BYZ|A Chain A, Structure Of E. Coli Kas I H298q Mutant In Complex With C12 Fatty Acid Length = 418 Back     alignment and structure
>pdb|2ALM|A Chain A, Crystal Structure Analysis Of A Mutant Beta-Ketoacyl-[acyl Carrier Protein] Synthase Ii From Streptococcus Pneumoniae Length = 431 Back     alignment and structure
>pdb|2BYY|A Chain A, E. Coli Kas I H298e Mutation Length = 418 Back     alignment and structure
>pdb|3U0F|A Chain A, The Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Bound To The Fragment 7-Hydroxycoumarin Length = 411 Back     alignment and structure
>pdb|3LRF|A Chain A, Crystal Structure Of Beta-Ketoacyl Synthase From Brucella Melitensis Length = 428 Back     alignment and structure
>pdb|2WGD|A Chain A, Crystal Structure Of Kasa Of Mycobacterium Tuberculosis Length = 416 Back     alignment and structure
>pdb|1F91|A Chain A, Beta-Ketoacyl-[acyl-Carrier-Protein] Synthase I In Complex With C10 Fatty Acid Substrate Length = 406 Back     alignment and structure
>pdb|2VB7|C Chain C, Beta-Ketoacyl-Acp Synthase I (Kas) From E. Coli, Apo Structure After Soak In Peg Solution Length = 406 Back     alignment and structure
>pdb|1EK4|A Chain A, Beta-Ketoacyl [acyl Carrier Protein] Synthase I In Complex With Dodecanoic Acid To 1.85 Resolution Length = 418 Back     alignment and structure
>pdb|3OYT|A Chain A, 1.84 Angstrom Resolution Crystal Structure Of 3-Oxoacyl-(Acyl Carrier Protein) Synthase I (Fabb) From Yersinia Pestis Co92 Length = 410 Back     alignment and structure
>pdb|2WGF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis C171q Kasa Variant Length = 416 Back     alignment and structure
>pdb|1TQY|B Chain B, The Actinorhodin KetosynthaseCHAIN LENGTH FACTOR Length = 415 Back     alignment and structure
>pdb|3ZEN|D Chain D, Cryo-em Structure Of The Mycobacterial Fatty Acid Synthase Length = 3089 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query545
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 1e-173
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 1e-171
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 1e-163
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 1e-160
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 8e-33
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 1e-22
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 2e-31
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 3e-30
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 3e-30
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 3e-29
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 3e-28
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 4e-28
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 7e-28
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 2e-27
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 4e-27
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 5e-27
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 8e-27
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 6e-26
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 3e-25
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 3e-25
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 5e-25
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 2e-24
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 4e-24
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 5e-21
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 3e-14
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 4e-17
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 7e-16
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 8e-10
1vt4_I 1221 APAF-1 related killer DARK; drosophila apoptosome, 3e-08
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Length = 965 Back     alignment and structure
 Score =  513 bits (1324), Expect = e-173
 Identities = 168/508 (33%), Positives = 251/508 (49%), Gaps = 50/508 (9%)

Query: 15  IAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKVKWGG 74
           + I G+ GK P S+N+ +FW  L    D +T+    RW        P         +  G
Sbjct: 6   VVIAGMSGKLPESENLQEFWDNLIGGVDMVTDDD-RRWKAGLYG-LP---------RRSG 54

Query: 75  FLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVS 134
            L D   FDA+FFG+ P +A  MDPQLRL +E T+ A+ D G  P  L G+ T ++ GVS
Sbjct: 55  KLKDLSRFDASFFGVHPKQAHTMDPQLRLLLEVTYEAIVDGGINPDSLRGTHTGVWVGVS 114

Query: 135 TADYKDILNEARHK-------GLVKSLAEPFPFMIANRVSYLFNFHGPSEVIDTACSSSL 187
            ++  + L+            G  ++       M+ANR+S+ F+F GPS  +DTACSSSL
Sbjct: 115 GSETSEALSRDPETLVGYSMVGCQRA-------MMANRLSFFFDFRGPSIALDTACSSSL 167

Query: 188 IAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRS 247
           +A+  A +++H   C  A+ GG+N+L  PN ++   + G+LS  G C  FD   NGY RS
Sbjct: 168 MALQNAYQAIHSGQCPAAIVGGINVLLKPNTSVQFLRLGMLSPEGTCKAFDTAGNGYCRS 227

Query: 248 EGVGVILLKPLKNAIIDNDHIYGIFRGNFENH-GGHSSSPTSPNMLAQKQLLIDVYRRAN 306
           EGV  +LL     A      +Y        N  G      T P+   Q+QL+  +Y+ A 
Sbjct: 228 EGVVAVLLTKKSLA----RRVYATILNAGTNTDGFKEQGVTFPSGDIQEQLIRSLYQSAG 283

Query: 307 INPYTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLE 366
           + P +  YIEAHGTGTK+GDP E+NG+  A     +    PLL     +GS K+N+GH E
Sbjct: 284 VAPESFEYIEAHGTGTKVGDPQELNGITRALCATRQ---EPLL-----IGSTKSNMGHPE 335

Query: 367 AASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYL-KLDNTPFYLVNKTCDWIQLDNNIPRR 425
            ASG+  + KVLL L++     N H   PN  +  L +    +V++              
Sbjct: 336 PASGLAALAKVLLSLEHGLWAPNLHFHSPNPEIPALLDGRLQVVDQPLPV------RGGN 389

Query: 426 AGVSSFGVGGSNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFI 485
            G++SFG GGSNVH+I+    +         +  L R++  S +T +++++ +   L   
Sbjct: 390 VGINSFGFGGSNVHIILRPNTQPPPAP--APHATLPRLLRASGRTPEAVQKLLEQGLRHS 447

Query: 486 IKEKNNFSLCDLAYTLQVGREAMKYRLA 513
              ++   L  L     V   AM +R  
Sbjct: 448 ---QDLAFLSMLNDIAAVPATAMPFRGY 472
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 Back     alignment and structure
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Length = 915 Back     alignment and structure
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Length = 917 Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Length = 1688 Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 424 Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Length = 413 Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Length = 437 Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Length = 416 Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Length = 431 Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Length = 415 Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Length = 412 Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Length = 427 Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Length = 430 Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Length = 438 Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Length = 428 Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Length = 408 Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Length = 451 Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Length = 406 Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Length = 434 Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Length = 416 Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Length = 428 Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Length = 1878 Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Length = 1887 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query545
2qo3_A 915 Eryaii erythromycin polyketide synthase modules 3; 100.0
2hg4_A 917 DEBS, 6-deoxyerythronolide B synthase; ketosynthas 100.0
3hhd_A 965 Fatty acid synthase; transferase, multienzyme, meg 100.0
2vz8_A 2512 Fatty acid synthase; transferase, phosphopantethei 100.0
2iwz_A438 3-oxoacyl-[acyl-carrier-protein] synthase; mitocho 100.0
1e5m_A416 KAS II, beta ketoacyl acyl carrier protein synthas 100.0
3ho9_A427 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, 100.0
1tqy_A424 Beta-ketoacyl synthase/acyl transferase; alpha-bet 100.0
3o04_A413 LMO2201 protein, beta-keto-acyl carrier protein sy 100.0
2gqd_A437 3-oxoacyl-[acyl-carrier-protein] synthase 2; dupli 100.0
1tqy_B415 Actinorhodin polyketide putative beta-ketoacyl SY; 100.0
4ewg_A412 Beta-ketoacyl synthase; ssgcid, structural genomic 100.0
3kzu_A428 3-oxoacyl-(acyl-carrier-protein) synthase II; seat 100.0
3mqd_A428 Beta-ketoacyl synthase; ssgcid, ALS collaborative 100.0
1ox0_A430 Beta ketoacyl-acyl carrier protein synthase; trans 100.0
2vba_A406 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytop 100.0
1j3n_A408 3-oxoacyl-(acyl-carrier protein) synthase II; cond 100.0
2gp6_A434 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiol 100.0
2ix4_A431 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ke 100.0
2wge_A416 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta 100.0
4ddo_A451 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgci 100.0
2uv8_A 1887 Fatty acid synthase subunit alpha (FAS2); fatty ac 100.0
2uv9_A 1878 Fatty acid synthase alpha subunits; fungal, dehydr 100.0
3zen_D3089 Fatty acid synthase; transferase, mycolic acid bio 100.0
2pff_A 1688 Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl 100.0
1wdk_C390 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrame 100.0
1wl4_A397 Acetyl-coenzyme A acetyltransferase 2; thiolase fo 100.0
2vu1_A392 Acetyl-COA acetyltransferase; acyltransferase, PHB 100.0
4egv_A520 Acetyl-COA acetyltransferase; NEW SUB-family, thio 100.0
1ulq_A401 Putative acetyl-COA acetyltransferase; structural 100.0
2wu9_A442 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine o 100.0
2iik_A418 3-ketoacyl-COA thiolase, peroxisomal; fatty acid m 100.0
2ib8_A395 Acetyl-COA acetyltransferase; thiolase fold, potas 100.0
4dd5_A396 Acetyl-COA acetyltransferase; structural genomics, 100.0
3ss6_A394 Acetyl-COA acetyltransferase; structural genomics, 100.0
4e1l_A395 Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, 100.0
1afw_A393 3-ketoacetyl-COA thiolase; fatty acid metabolism; 100.0
1ub7_A322 3-oxoacyl-[acyl-carrier protein] synthase; fatty a 99.98
3goa_A387 3-ketoacyl-COA thiolase; metabolism, fatty acid, p 99.98
1hnj_A317 Beta-ketoacyl-acyl carrier protein synthase III; F 99.97
2ebd_A309 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 99.97
1mzj_A339 Beta-ketoacylsynthase III; beta-ketosynthase, arom 99.97
3svk_A407 Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, 99.97
1zow_A313 3-oxoacyl-[acyl-carrier-protein] synthase III; FAB 99.96
1u6e_A335 3-oxoacyl-[acyl-carrier-protein] synthase III; tra 99.95
2x3e_A331 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, 99.95
1u0m_A382 Putative polyketide synthase; type III polyketide 99.95
2h84_A374 Steely1; thiolase-fold, type III polyketide syntha 99.95
3s21_A345 3-oxoacyl-[ACP] synthase III; non-decarboxylative 99.88
3tsy_A979 Fusion protein 4-coumarate--COA ligase 1, resvera 99.88
4dfe_A333 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgci 99.88
1ted_A393 PKS18; thiolase fold, substrate binding tunnel, tr 99.87
2d3m_A406 Pentaketide chromone synthase; chalcone synthase, 99.81
3a5r_A387 Benzalacetone synthase; chalcone synthase, type II 99.77
1ee0_A402 2-pyrone synthase; polyketide synthase, thiolase f 99.74
1xes_A413 Dihydropinosylvin synthase; native structure, tran 99.73
3led_A392 3-oxoacyl-acyl carrier protein synthase III; struc 99.73
3gwa_A365 3-oxoacyl-(acyl-carrier-protein) synthase III; str 99.72
3il3_A323 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 99.72
1i88_A389 CHS2, chalcone synthase 2; polyketide synthase, tr 99.72
1xpm_A396 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA s 99.69
3s3l_A357 CERJ; acyltransferase, FABH homologue, KS III homo 99.68
3awk_A402 Chalcone synthase-like polyketide synthase; type I 99.67
3il6_A321 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, 99.67
3h78_A359 PQS biosynthetic enzyme; PQSD, anthranilic acid, a 99.66
3ov2_A393 Curcumin synthase; type III polyketide synthase, t 99.66
3oit_A387 OS07G0271500 protein; type III polyketide synthase 99.64
2p0u_A413 Stilbenecarboxylate synthase 2; polyketide synthas 99.64
4efi_A354 3-oxoacyl-(acyl-carrier protein) synthase; structu 99.64
2f82_A450 HMG-COA synthase; HMGS1, transferase; 2.10A {Brass 99.63
3tzy_A 491 Polyketide synthase PKS13; acyltransferase, long f 99.54
3e1h_A465 PKSIIINC, putative uncharacterized protein; resorc 99.52
4ewp_A350 3-oxoacyl-[acyl-carrier-protein] synthase 3; trans 99.51
3euo_A379 Type III pentaketide synthase; alpha helix, acyltr 99.5
3lma_A347 Stage V sporulation protein AD (spovad); NESG, str 99.47
3v7i_A413 Putative polyketide synthase; type III polyketide 99.43
3v4n_A388 HMG-COA synthase; hydroxymethylglutaryl-COA syntha 99.37
3sqz_A425 Putative hydroxymethylglutaryl-COA synthase; thiol 99.36
2p8u_A478 Hydroxymethylglutaryl-COA synthase, cytoplasmic; h 99.29
2v4w_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 99.29
2wya_A460 Hydroxymethylglutaryl-COA synthase, mitochondrial; 98.95
4amm_A 401 DYNE8; transferase; 1.40A {Micromonospora chersina 98.76
>2qo3_A Eryaii erythromycin polyketide synthase modules 3; ketosynthase, acyltransferase, phosphopantetheine, transfera; 2.59A {Saccharopolyspora erythraea} Back     alignment and structure
Probab=100.00  E-value=1e-102  Score=891.69  Aligned_cols=516  Identities=32%  Similarity=0.544  Sum_probs=463.5

Q ss_pred             CCCCcEEEEeeeeecCCC-CCHHHHHHHHHcCCcceeeCCCCC-CccccccCCCCCCCCCccceeeeeecccccCCcccC
Q psy613           10 IDTNTIAIIGIGGKFPGS-KNINDFWRKLENNEDAITEVPTSR-WDWKAIYGDPHLESGKTKVKWGGFLYDADCFDANFF   87 (545)
Q Consensus        10 ~~~~~iaIvG~g~~~P~~-~~~~~~w~~L~~g~~~~~~~p~~r-~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~fD~~~f   87 (545)
                      ...++||||||||+||++ .++++||++|.+|+++++++|.+| |+.+.+|++.....++.+++++||+++++.||+.||
T Consensus         3 ~~~~~iaIvG~~~~~P~g~~~~~~~w~~L~~g~~~~~~~p~~r~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~FD~~~f   82 (915)
T 2qo3_A            3 LESDPIAIVSMACRLPGGVNTPQRLWELLREGGETLSGFPTDRGWDLARLHHPDPDNPGTSYVDKGGFLDDAAGFDAEFF   82 (915)
T ss_dssp             -CCCCEEEEEEEEECSTTCCSHHHHHHHHHTTCCCCEECCSSSCCCHHHHBCSCTTSTTCBSCCEEBCCSCSSEECHHHH
T ss_pred             CCCCCEEEEeeEEECCCCCCCHHHHHHHHHcCCCcccCCCccccCChhhccCcccccCCCcccceeEEeCCccccCHhhc
Confidence            345789999999999998 899999999999999999999999 999998887777788889999999999999999999


Q ss_pred             CCCHHHHhhCCHHHHHHHHHHHHHHHHCCCCCCCCCCCeEEEEEccChhhHHHHHHHHhhcCcccccCCCchhhhhhHhh
Q psy613           88 GISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVSTADYKDILNEARHKGLVKSLAEPFPFMIANRVS  167 (545)
Q Consensus        88 ~i~~~ea~~mdp~~rl~l~aa~~ALedAG~~~~~~~~~~~gv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~ris  167 (545)
                      ||+++|++.||||+||+++++|+||||||++++++++.++|||+|++..+|..... ..........++...++++++|+
T Consensus        83 ~i~~~ea~~mdp~~rL~leaa~eALedAGi~~~~i~~~~~gV~vG~~~~~~~~~~~-~~~~~~~~~~~g~~~~~~a~ris  161 (915)
T 2qo3_A           83 GVSPREAAAMDPQQRLLLETSWELVENAGIDPHSLRGTATGVFLGVAKFGYGEDTA-AAEDVEGYSVTGVAPAVASGRIS  161 (915)
T ss_dssp             TCCHHHHHTSCHHHHHHHHHHHHHHHHTTCCGGGGTTBCCEEEEECCCCCTTTTCC----CTTCHHHHTTCHHHHHHHHH
T ss_pred             CCCHHHHHhCCHHHHHHHHHHHHHHHHcCCChHHcCCcceEEEEEecCchHHhhhc-ccccccccccccccccHHHHHHH
Confidence            99999999999999999999999999999999999999999999998887743221 11111222344566778999999


Q ss_pred             hhcCCCCceeeccCccchHHHHHHHHHHHHhcCCCCEEEEeccccccChHHHHHHhhcCCCCCCCCCCCccCCCCCcccc
Q psy613          168 YLFNFHGPSEVIDTACSSSLIAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSENGRCMTFDQRANGYVRS  247 (545)
Q Consensus       168 ~~lgl~Gp~~tv~~aCsSsl~Al~~A~~~I~~G~~d~alvgGv~~~~~~~~~~~~~~~g~ls~~g~~~pfd~~a~G~~~g  247 (545)
                      +.|||+||+++|+++||||++||++||++|++|+||+|||||+|.++.|..+..+...++++++++|+|||.+++|+++|
T Consensus       162 ~~lgl~Gps~tv~taCsSsl~Al~~A~~~I~~G~~d~aLvgGve~~~~p~~~~~~~~~~~ls~~g~~~~Fd~~adG~v~g  241 (915)
T 2qo3_A          162 YTMGLEGPSISVDTACSSSLVALHLAVESLRKGESSMAVVGGAAVMATPGVFVDFSRQRALAADGRSKAFGAGADGFGFS  241 (915)
T ss_dssp             HHHTBCSCEEEEECGGGHHHHHHHHHHHHHHTTSCSSEEEEEEECCSSTHHHHHHHTTTCBCSSCCCCTTBTTCCCBCBB
T ss_pred             HHhCCCCCEEEECCCCHHHHHHHHHHHHHHHcCCCCEEEEeEehhhcCHHHHHHHhhhcccCCCCCcccccCCCCceeec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cceEEEEEcchhhhhhcCCcEEEEEEeeeeccCCCCCCCCCCCHHHHHHHHHHHHHhcCCCCCCccEEEeccCCCCCCCH
Q psy613          248 EGVGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINPYTINYIEAHGTGTKLGDP  327 (545)
Q Consensus       248 EGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~~g~~~~~~~p~~~~~~~~i~~al~~Agi~~~dId~ve~hgtgT~~gD~  327 (545)
                      ||+++||||++++|+++|++||++|+|+++++|+.+.+.+.|+..+|.++|+++|++||++|+||||||+|||||++||+
T Consensus       242 EGagavVL~~~~~A~~~g~~i~a~I~G~~~~~dg~~~~~~~p~~~~~~~~i~~Al~~Agl~p~dId~ve~HgtgT~~gD~  321 (915)
T 2qo3_A          242 EGVTLVLLERLSEARRNGHEVLAVVRGSALNQDGASNGLSAPSGPAQRRVIRQALESCGLEPGDVDAVEAHGTGTALGDP  321 (915)
T ss_dssp             CEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECCSCSSTTCCCHHHHHHHHHHHHHHTTCCGGGCCEEECCCCCCTTTHH
T ss_pred             CceEEEEEeEhHHhhhCCCCeEEEEEEEEEecCCCccCCCCCCHHHHHHHHHHHHHHcCCCHHHCcEEEecCCCCccCCH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHhhhcccccCCCCCCCceeecCcccCCCcccchhhHHHHHHHHHhHhcCcccCCCCCCCCCCCCCCCCCCee
Q psy613          328 IEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGNPHLKIPNSYLKLDNTPFY  407 (545)
Q Consensus       328 ~E~~al~~~f~~~~~~~~~~~~~~~~~igs~K~~iGH~~~AsG~~~lik~~l~l~~~~ipp~~~~~~~~~~~~~~~~~~~  407 (545)
                      +|..+|.++|+...      ....+|.+||+|+|+||+++|||+++++|++++|++++|||++||++|||.|+++.++|+
T Consensus       322 ~E~~al~~~f~~~~------~~~~~~~vgs~K~~iGH~~~AaG~~~lik~~l~L~~~~ipp~~~~~~~~p~~~~~~~~~~  395 (915)
T 2qo3_A          322 IEANALLDTYGRDR------DADRPLWLGSVKSNIGHTQAAAGVTGLLKVVLALRNGELPATLHVEEPTPHVDWSSGGVA  395 (915)
T ss_dssp             HHHHHHHHHTSSSC------CTTSCEEEECTHHHHCBCGGGHHHHHHHHHHHHHHHTEECCCSSCSSBCTTSCCSSSSEE
T ss_pred             HHHHHHHHHhcccc------CCCCcccccCcccceeCCccccchHHHHHHHHHHhcCCCCCCCCCCCCCcccccccCcee
Confidence            99999999997521      123468899999999999999999999999999999999999999999999999999999


Q ss_pred             eecccccccccCCCCceEEeecccCCCCceEEEEEccccccccccccccccceEEEEEEecCCHHHHHHHHHHHHHHHHh
Q psy613          408 LVNKTCDWIQLDNNIPRRAGVSSFGVGGSNVHVIIEEYRKNIKTKYIKENTVLVRIIMLSAKTKKSLKEYVILLLEFIIK  487 (545)
Q Consensus       408 ~~~~~~~w~~~~~~~~r~a~v~sfG~gG~nah~il~~~~~~~~~~~~~~~~~~~~l~~~sa~~~~~l~~~~~~l~~~l~~  487 (545)
                      ++++.++|+.  ...+|+++||||||||+|+|+|||+++....... ......+.+|+|||+++++|++++++|.+||. 
T Consensus       396 ~~~~~~~w~~--~~~~r~a~v~sfG~gG~Nah~vl~~~~~~~~~~~-~~~~~~~~~~~lsa~~~~~l~~~~~~~~~~l~-  471 (915)
T 2qo3_A          396 LLAGNQPWRR--GERTRRAAVSAFGISGTNAHVIVEEAPEREHRET-TAHDGRPVPLVVSARSTAALRAQAAQIAELLE-  471 (915)
T ss_dssp             ECSSCEECCS--SSSCCEEEEEEECTTSEEEEEEEEECCC---------CCSSCEEEEEEESSHHHHHHHHHHHHHHTT-
T ss_pred             eecCCccccc--CCCCcEEEEeeecCCCceEEEEEeeccccccccc-cccCCcccceeEecCCHHHHHHHHHHHHHHhc-
Confidence            9999999975  3458999999999999999999999875322111 11111246789999999999999999999996 


Q ss_pred             cCCCCCHHHHHHHHHhcCCCCCceEEEEEcCHHHHHHHHHHHHccCcCCc
Q psy613          488 EKNNFSLCDLAYTLQVGREAMKYRLAIYVNSYEDLIKKLQDYLNKKITNG  537 (545)
Q Consensus       488 ~~~~~~~~~~a~tl~~~r~~~~~r~~~~~~~~~~l~~~l~~~~~~~~~~~  537 (545)
                      + +..++.|+||||+.+|++++||.+++++|.+||+++|+.+..+...++
T Consensus       472 ~-~~~~l~d~~~tl~~~r~~~~~r~~~~~~~~~~l~~~l~~~~~~~~~~~  520 (915)
T 2qo3_A          472 R-PDADLAGVGLGLATTRARHEHRAAVVASTREEAVRGLREIAAGAATAD  520 (915)
T ss_dssp             S-SSCCHHHHHHHHHHSSCCCSEEEEEEESSHHHHHHHHHHHHHTCCCCT
T ss_pred             C-CccchhHHHHHHhhcccccCceEEEEECCHHHHHHHHHHHhcCCCCcc
Confidence            4 356899999999999999999999999999999999999887754443
>2hg4_A DEBS, 6-deoxyerythronolide B synthase; ketosynthase, acyltransferase, module 5, transferase; 2.73A {Saccharopolyspora erythraea} Back     alignment and structure
>3hhd_A Fatty acid synthase; transferase, multienzyme, megasynthase, fatty acid synthesis, acetylation, cytoplasm, fatty acid biosynthesis, hydrolase; 2.15A {Homo sapiens} PDB: 2jfk_A* 2jfd_A Back     alignment and structure
>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Back     alignment and structure
>2iwz_A 3-oxoacyl-[acyl-carrier-protein] synthase; mitochondria, mitochondrion, lipid synthesis, fatty acid SYN fatty acid biosynthesis; 1.65A {Homo sapiens} PDB: 2iwy_A 2c9h_A Back     alignment and structure
>1e5m_A KAS II, beta ketoacyl acyl carrier protein synthase II; condensing enzyme, biosynthetic role, carbon-carbon bond formation; 1.54A {Synechocystis SP} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3ho9_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; FABF, platensimycin, platencin A1, KAS2, acyltransferase, fatty acid biosynthesis; HET: N3A; 1.90A {Escherichia coli} PDB: 3hnz_A* 3ho2_A* 3i8p_A* 3g11_A* 2gfx_A* 3g0y_A* 2gfv_A* 2gfw_A 2gfy_A* 1kas_A 1b3n_A Back     alignment and structure
>1tqy_A Beta-ketoacyl synthase/acyl transferase; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>3o04_A LMO2201 protein, beta-keto-acyl carrier protein synthase II; csgid, structural genomics; 1.85A {Listeria monocytogenes} Back     alignment and structure
>2gqd_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; duplicated babababb fold, transferase; 2.30A {Staphylococcus aureus} Back     alignment and structure
>1tqy_B Actinorhodin polyketide putative beta-ketoacyl SY; alpha-beta-alpha-beta-alpha, heterodimer, transferase; 2.00A {Streptomyces coelicolor} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>4ewg_A Beta-ketoacyl synthase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, transferase; 2.25A {Burkholderia phymatum} Back     alignment and structure
>3kzu_A 3-oxoacyl-(acyl-carrier-protein) synthase II; seattle structural genomics center for infectious disease, ssgcid, acyltransferase; 1.75A {Brucella melitensis} PDB: 3e60_A Back     alignment and structure
>3mqd_A Beta-ketoacyl synthase; ssgcid, ALS collaborative crystallography, beta-ketoacyl SYN brucella melitensis, fragments of LIFE; HET: 3MQ; 1.25A {Brucella melitensis biovar abortus} PDB: 3lrf_A* 3u0e_A* 3u0f_A* Back     alignment and structure
>1ox0_A Beta ketoacyl-acyl carrier protein synthase; transferase; 1.30A {Streptococcus pneumoniae} SCOP: c.95.1.1 c.95.1.1 PDB: 1oxh_A 2alm_A 2rjt_A Back     alignment and structure
>2vba_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; cytoplasm, antibiotic, transferase, amino-thiazole, acyltransferase, lipid synthesis; HET: P4T; 1.36A {Escherichia coli} SCOP: c.95.1.1 c.95.1.1 PDB: 1fj4_A* 1g5x_A 2aq7_A* 1fj8_A* 2aqb_A 2bui_A 2buh_A 2vb7_A* 2vb8_A 2vb9_A* 1h4f_A 1dd8_A 2cdh_A 2bz4_A 2byz_A 2bz3_A* 2byy_A* 1f91_A* 2cf2_A 2byw_A ... Back     alignment and structure
>1j3n_A 3-oxoacyl-(acyl-carrier protein) synthase II; condensing enzymes, fatty acid elongation, acyl-carrier protein (ACP); HET: CIT; 2.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2gp6_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; thiolase fold, structural genomics, PSI, protein structure initiative; 2.40A {Mycobacterium tuberculosis} Back     alignment and structure
>2ix4_A 3-oxoacyl-[acyl-carrier-protein] synthase; beta-ketoacyl-(acyl carrier protein) synthase, lipid metabol condensing enzyme; 1.95A {Arabidopsis thaliana} SCOP: c.95.1.1 c.95.1.1 PDB: 1w0i_A Back     alignment and structure
>2wge_A 3-oxoacyl-[acyl-carrier-protein] synthase 1; beta ketoacyl synthase I thiolactomycin, cytoplasm, transferase, acyltransferase; HET: TLM; 1.80A {Mycobacterium tuberculosis} PDB: 2wgd_A* 2wgg_A* 2wgf_A* Back     alignment and structure
>4ddo_A 3-oxoacyl-[acyl-carrier-protein] synthase 2; ssgcid, struct genomics, seattle structural genomics center for infectious transferase; 1.90A {Burkholderia vietnamiensis} PDB: 4f32_A* Back     alignment and structure
>2uv8_A Fatty acid synthase subunit alpha (FAS2); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_A* 3hmj_A* Back     alignment and structure
>2uv9_A Fatty acid synthase alpha subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; 3.1A {Thermomyces lanuginosus} PDB: 2uvb_A* Back     alignment and structure
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* Back     alignment and structure
>2pff_A Fatty acid synthase subunit alpha, 3-oxoacyl-[acyl-carrier-PR; fatty acid synthase, acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl synthase, dehydratase; 4.00A {Saccharomyces cerevisiae} Back     alignment and structure
>1wdk_C 3-ketoacyl-COA thiolase; alpha2BETA2 heterotetrameric complex, lyase, oxidoreductase/transferase complex, lyase; HET: ACO NAD N8E; 2.50A {Pseudomonas fragi} SCOP: c.95.1.1 c.95.1.1 PDB: 1wdl_C* 1wdm_C* 2d3t_C* Back     alignment and structure
>1wl4_A Acetyl-coenzyme A acetyltransferase 2; thiolase fold; HET: COA; 1.55A {Homo sapiens} PDB: 1wl5_A Back     alignment and structure
>2vu1_A Acetyl-COA acetyltransferase; acyltransferase, PHB biosynthesis, thiolase FOL; HET: CSO OPI; 1.51A {Zoogloea ramigera} PDB: 1nl7_A* 1ou6_A* 2vu0_A* 1m4s_A* 2vu2_A* 2wkv_A* 2wku_A* 1m1t_A 1m3k_A 1m1o_A 1m3z_A* 2vtz_A* 2wl5_A* 2wkt_A* 2wl4_A* 1m4t_A* 2wl6_A 1qfl_A* 1dlv_A* 1dlu_A* ... Back     alignment and structure
>4egv_A Acetyl-COA acetyltransferase; NEW SUB-family, thiolase fold; 2.71A {Mycobacterium smegmatis} Back     alignment and structure
>1ulq_A Putative acetyl-COA acetyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 3.00A {Thermus thermophilus} SCOP: c.95.1.1 c.95.1.1 Back     alignment and structure
>2wu9_A 3-ketoacyl-COA thiolase 2, peroxisomal; cysteine oxidation, fatty acid metabolism, oxylipin biosynthesis, plant lipid metabolism; 1.50A {Arabidopsis thaliana} PDB: 2c7y_A 2c7z_A 2wua_A Back     alignment and structure
>2iik_A 3-ketoacyl-COA thiolase, peroxisomal; fatty acid metabolism, structural genomics, structural genom consortium, SGC, transferase; 2.55A {Homo sapiens} Back     alignment and structure
>2ib8_A Acetyl-COA acetyltransferase; thiolase fold, potassium ION, chloride, beta-alpha-beta-ALPH alpha-beta-BETA topology; HET: MES; 1.85A {Homo sapiens} PDB: 2ib7_A* 2ib9_A* 2ibu_A* 2ibw_A* 2iby_A* 2f2s_A* Back     alignment and structure
>4dd5_A Acetyl-COA acetyltransferase; structural genomics, center for structural genomics of infec diseases, csgid, thiolase; 1.25A {Clostridium difficile} Back     alignment and structure
>3ss6_A Acetyl-COA acetyltransferase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; HET: CSO; 1.70A {Bacillus anthracis} Back     alignment and structure
>4e1l_A Acetoacetyl-COA thiolase 2; 3-layer(ABA) sandwich, transferase; 2.00A {Clostridium difficile} Back     alignment and structure
>1afw_A 3-ketoacetyl-COA thiolase; fatty acid metabolism; 1.80A {Saccharomyces cerevisiae} SCOP: c.95.1.1 c.95.1.1 PDB: 1pxt_A Back     alignment and structure
>1ub7_A 3-oxoacyl-[acyl-carrier protein] synthase; fatty acid synthesis, beta-ketoacyl-ACP synthase III, FABH; 2.30A {Thermus thermophilus} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3goa_A 3-ketoacyl-COA thiolase; metabolism, fatty acid, phospholipid, IDP01071, acyltransferase, cytoplasm, fatty acid metabolism; 1.70A {Salmonella typhimurium} Back     alignment and structure
>1hnj_A Beta-ketoacyl-acyl carrier protein synthase III; FABH, transferase; HET: MLC; 1.46A {Escherichia coli} SCOP: c.95.1.2 c.95.1.2 PDB: 1hn9_A* 1hnh_A* 1hnd_A* 1hnk_A 1mzs_A* 2eft_A* 2gyo_A* 3il9_A 1ebl_A* Back     alignment and structure
>2ebd_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, aquifex VF5, lipid metabolism, structural genomics; 2.10A {Aquifex aeolicus} Back     alignment and structure
>1mzj_A Beta-ketoacylsynthase III; beta-ketosynthase, aromatic polyketide, biosynthetic engineering, catalytic triad, transferase; HET: COA; 2.10A {Streptomyces SP} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>3svk_A Acetyl-COA acetyltransferase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.20A {Mycobacterium avium} Back     alignment and structure
>1zow_A 3-oxoacyl-[acyl-carrier-protein] synthase III; FABH, fatty acid biosynthesis, transferase; 2.00A {Staphylococcus aureus subsp} PDB: 3il7_A Back     alignment and structure
>1u6e_A 3-oxoacyl-[acyl-carrier-protein] synthase III; transferase; 1.85A {Mycobacterium tuberculosis} SCOP: c.95.1.2 c.95.1.2 PDB: 1u6s_A* 1m1m_A 1hzp_A* 2qnx_A* 2qnz_A* 2qo1_A* 2qx1_A* 2qo0_A* 2qny_A* 2ahb_A 2aj9_A Back     alignment and structure
>2x3e_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; HED, transferase, acyltransferase, lipid synthesis, multifun enzyme; 1.81A {Pseudomonas aeruginosa} Back     alignment and structure
>1u0m_A Putative polyketide synthase; type III polyketide synthase, PKS, bacterial, thiolase fold, beta-alpha-beta-alpha fold, catalytic triad; HET: 15P; 2.22A {Streptomyces coelicolor} SCOP: c.95.1.2 c.95.1.2 Back     alignment and structure
>2h84_A Steely1; thiolase-fold, type III polyketide synthase, PKS, chalcone-S synthase superfamily, type I PKS; HET: P6G; 2.90A {Dictyostelium discoideum} Back     alignment and structure
>3s21_A 3-oxoacyl-[ACP] synthase III; non-decarboxylative claisen condensation reaction, transfera; HET: CER; 1.70A {Xanthomonas campestris PV} PDB: 3s23_A* 3row_A 3s1z_A 3s20_A* 3fk5_A Back     alignment and structure
>3tsy_A Fusion protein 4-coumarate--COA ligase 1, resvera synthase; transferase; 3.10A {Arabidospis thaliana} Back     alignment and structure
>4dfe_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; ssgcid, seattle structural genomics center for infectious DI transferase; 2.35A {Burkholderia xenovorans} Back     alignment and structure
>1ted_A PKS18; thiolase fold, substrate binding tunnel, transferase; HET: MYR; 2.25A {Mycobacterium tuberculosis} SCOP: c.95.1.2 PDB: 1tee_A Back     alignment and structure
>3a5r_A Benzalacetone synthase; chalcone synthase, type III polyketide synthase, transferase, acyltransferase; HET: HC4; 1.60A {Rheum palmatum} PDB: 3a5q_A* 3a5s_A Back     alignment and structure
>1xes_A Dihydropinosylvin synthase; native structure, transferase; HET: 3IO; 1.70A {Pinus sylvestris} PDB: 1xet_A* 1u0u_A Back     alignment and structure
>3led_A 3-oxoacyl-acyl carrier protein synthase III; structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.45A {Rhodopseudomonas palustris} Back     alignment and structure
>3gwa_A 3-oxoacyl-(acyl-carrier-protein) synthase III; structural genomics, synthetase; 1.60A {Burkholderia pseudomallei} PDB: 3gwe_A Back     alignment and structure
>3il3_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; 2.70A {Haemophilus influenzae} Back     alignment and structure
>1xpm_A 3-hydroxy-3-methylglutaryl COA synthase; HMG-COA synthase, HMGS, coenzyme A, thiolase fold, condensing enzyme; HET: HMG CAA; 1.60A {Staphylococcus aureus subsp} SCOP: c.95.1.2 c.95.1.2 PDB: 1xpl_A* 1xpk_A* 1tvz_A 1txt_A* Back     alignment and structure
>3s3l_A CERJ; acyltransferase, FABH homologue, KS III homologue, dimethyl transfer, transferase; 2.00A {Streptomyces tendae} PDB: 3t5y_A* 3t6s_A* 3t8e_A 3t5y_B* Back     alignment and structure
>3il6_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; FABH, fatty acid biosynthesis, antibiotic, acyltransferase, cytoplasm, lipid synthesis; HET: B83; 2.50A {Enterococcus faecalis} PDB: 3il5_A* 3il4_A* Back     alignment and structure
>3h78_A PQS biosynthetic enzyme; PQSD, anthranilic acid, anthraniloyl-COA, transferase; HET: BE2; 1.70A {Pseudomonas aeruginosa PAO1} PDB: 3h76_A 3h77_A* Back     alignment and structure
>3ov2_A Curcumin synthase; type III polyketide synthase, transferase; 2.32A {Curcuma longa} PDB: 3ov3_A Back     alignment and structure
>3oit_A OS07G0271500 protein; type III polyketide synthases, transferase; 2.00A {Oryza sativa} PDB: 3ale_A Back     alignment and structure
>4efi_A 3-oxoacyl-(acyl-carrier protein) synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.35A {Burkholderia xenovorans} Back     alignment and structure
>2f82_A HMG-COA synthase; HMGS1, transferase; 2.10A {Brassica juncea} PDB: 2f9a_A* 2fa0_A* 2fa3_A* Back     alignment and structure
>3tzy_A Polyketide synthase PKS13; acyltransferase, long fatty acid chain transferase, acyl CAR protein, transferase; HET: PLM; 2.20A {Mycobacterium tuberculosis} PDB: 3tzw_A 3tzx_A* 3tzz_A* Back     alignment and structure
>3e1h_A PKSIIINC, putative uncharacterized protein; resorcinolic lipid synthase, type III PKS, acyltransferase, transferase; 2.58A {Neurospora crassa} Back     alignment and structure
>4ewp_A 3-oxoacyl-[acyl-carrier-protein] synthase 3; transferase; 2.20A {Micrococcus luteus nctc 2665} Back     alignment and structure
>3lma_A Stage V sporulation protein AD (spovad); NESG, structural genomics, PSI-2, protein structure initiative; 1.99A {Bacillus licheniformis} PDB: 3lm6_A Back     alignment and structure
>3v7i_A Putative polyketide synthase; type III polyketide synthase, acyltransferase, transferase,; 2.90A {Streptomyces coelicolor} Back     alignment and structure
>3v4n_A HMG-COA synthase; hydroxymethylglutaryl-COA synthase, nitrosylation, transfera inhibitor complex; HET: BTB; 1.60A {Enterococcus faecalis} PDB: 3v4x_A* 1x9e_A 1ysl_B* 1ysl_A* 2hdb_A* Back     alignment and structure
>2p8u_A Hydroxymethylglutaryl-COA synthase, cytoplasmic; hydromethylglutaryl COA, mevalonate pathway, structural GENO structural genomics consortium, SGC; HET: COA; 2.00A {Homo sapiens} Back     alignment and structure
>2wya_A Hydroxymethylglutaryl-COA synthase, mitochondrial; steroid biosynthesis, cholesterol biosynthesis, mitochondrion, phosphoprotein; HET: HMG; 1.70A {Homo sapiens} Back     alignment and structure
>4amm_A DYNE8; transferase; 1.40A {Micromonospora chersina} PDB: 4amn_A 4amp_A 4amo_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 545
d1j3na1249 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II { 7e-56
d2gfva1250 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II { 7e-52
d1tqya2205 c.95.1.1 (A:219-423) Actinorhodin polyketide putat 6e-46
d1e5ma1250 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II { 2e-45
d1ox0a1256 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II 5e-44
d2ix4a1270 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II 2e-43
d2gfva2161 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II 2e-37
d2vbaa1253 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {E 4e-35
d1e5ma2161 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II 2e-32
d2ix4a2161 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II 6e-32
d1tqyb2194 c.95.1.1 (B:210-403) Actinorhodin polyketide putat 5e-31
d1j3na2159 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II 1e-29
d1tqya1216 c.95.1.1 (A:3-218) Actinorhodin polyketide putativ 4e-28
d2vbaa2151 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I 2e-25
d1ox0a2158 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II 4e-25
d1tqyb1208 c.95.1.1 (B:2-209) Actinorhodin polyketide putativ 9e-23
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 249 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Beta-ketoacyl-ACP synthase II
species: Thermus thermophilus [TaxId: 274]

 Score =  186 bits (472), Expect = 7e-56
 Identities = 52/262 (19%), Positives = 91/262 (34%), Gaps = 30/262 (11%)

Query: 15  IAIIGIGGKFPGSKNINDFWRKLENNEDAITEVPTSRWDWKAIYGDPHLESGKTKVKWGG 74
           + + G+G   P       F +     +  +  +   R+D  A+                 
Sbjct: 4   VVVTGLGALTPIGVGQEAFHKAQLAGKSGVRPIT--RFDASALPVRIA------------ 49

Query: 75  FLYDADCFDANFFGISPAEAEVMDPQLRLFIETTWAALEDAGYPPSKLSGSKTAIFAGVS 134
               A+        +   E   +D  ++  +     ALEDAG  P  L   +     G  
Sbjct: 50  ----AEVDVDPGAYLDRKELRRLDRFVQYALIAAQLALEDAGLKPEDLDPERVGTLVGTG 105

Query: 135 TADYKDILNEARHK-GLVKSLAEPF------PFMIANRVSYLFNFHGPSEVIDTACSSSL 187
               +    ++R       +   PF        M +  ++  + F GPS  + TAC++  
Sbjct: 106 IGGMETWEAQSRVFLERGPNRISPFFIPMMIANMASAHIAMRYGFTGPSSTVVTACATGA 165

Query: 188 IAINRAIESLHLKNCDLALAGGVNILASPNITIASSKAGLLSEN-----GRCMTFDQRAN 242
            A+  A+  + L   DL LAGG     +P    A +    LS            F    +
Sbjct: 166 DALGSALRMIQLGEADLVLAGGTEAAITPMAIGAFAVMRALSTRNEEPEKASRPFTLSRD 225

Query: 243 GYVRSEGVGVILLKPLKNAIID 264
           G+V  EG GV++L+  ++A   
Sbjct: 226 GFVMGEGAGVLVLEAYEHAKKR 247
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 250 Back     information, alignment and structure
>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 205 Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 250 Back     information, alignment and structure
>d1ox0a1 c.95.1.1 (A:-5-251) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 256 Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 270 Back     information, alignment and structure
>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Length = 161 Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 253 Back     information, alignment and structure
>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Length = 161 Back     information, alignment and structure
>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Length = 161 Back     information, alignment and structure
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 194 Back     information, alignment and structure
>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Length = 159 Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Length = 216 Back     information, alignment and structure
>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Length = 151 Back     information, alignment and structure
>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Length = 158 Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Length = 208 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query545
d1tqya2205 Actinorhodin polyketide putative beta-ketoacyl syn 100.0
d1tqyb2194 Actinorhodin polyketide putative beta-ketoacyl syn 100.0
d2gfva1250 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 100.0
d1ox0a1256 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 100.0
d1j3na1249 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 100.0
d1e5ma1250 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 100.0
d2vbaa1253 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 100.0
d2ix4a1270 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 100.0
d1e5ma2161 Beta-ketoacyl-ACP synthase II {Synechocystis sp. [ 100.0
d2gfva2161 Beta-ketoacyl-ACP synthase II {Escherichia coli [T 100.0
d1j3na2159 Beta-ketoacyl-ACP synthase II {Thermus thermophilu 100.0
d1ox0a2158 Beta-ketoacyl-ACP synthase II {Streptococcus pneum 100.0
d2ix4a2161 Beta-ketoacyl-ACP synthase II {Thale cress (Arabid 100.0
d2vbaa2151 Beta-ketoacyl-ACP synthase I {Escherichia coli [Ta 100.0
d1tqya1216 Actinorhodin polyketide putative beta-ketoacyl syn 100.0
d1tqyb1208 Actinorhodin polyketide putative beta-ketoacyl syn 100.0
d1teda_372 Polyketide synthase PKS18 {Mycobacterium tuberculo 99.46
d1u6ea1184 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 99.25
d1ub7a1172 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 99.17
d1m3ka1268 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 99.13
d1hnja1174 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 99.11
d1mzja1181 Priming beta-ketosynthase from the r1128 polyketid 99.08
d1wdkc1262 Fatty oxidation complex beta subunit (3-ketoacyl-C 99.06
d1bi5a1235 Chalcone synthase {Alfalfa (Medicago sativa) [TaxI 98.9
d1ulqa1273 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 98.86
d1afwa1269 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 98.86
d1u0ma1200 Putative polyketide synthase SCO1206 {Streptomyces 98.82
d1ulqa2125 Beta-ketoadipyl CoA thiolase {Thermus thermophilus 98.71
d1afwa2124 Thiolase {Baker's yeast (Saccharomyces cerevisiae) 98.68
d1m3ka2124 Biosynthetic thiolase {Zoogloea ramigera [TaxId: 3 98.62
d1xpma1166 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Stap 98.59
d1wdkc2128 Fatty oxidation complex beta subunit (3-ketoacyl-C 98.49
d1u6ea2148 Ketoacyl-ACP synthase III (FabH) {Mycobacterium tu 95.64
d1ub7a2149 Ketoacyl-ACP synthase III (FabH) {Thermus thermoph 94.51
d1hnja2143 Ketoacyl-ACP synthase III (FabH) {Escherichia coli 93.69
d1mzja2153 Priming beta-ketosynthase from the r1128 polyketid 91.76
d1u0ma2148 Putative polyketide synthase SCO1206 {Streptomyces 90.36
>d1tqya2 c.95.1.1 (A:219-423) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: Thiolase-like
superfamily: Thiolase-like
family: Thiolase-related
domain: Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA
species: Streptomyces coelicolor [TaxId: 1902]

Probab=100.00  E-value=8.4e-50  Score=377.44  Aligned_cols=199  Identities=20%  Similarity=0.289  Sum_probs=183.0

Q ss_pred             CCCCCCCccCCCCCcccccceEEEEEcchhhhhhcCCcEEEEEEeeeeccCCCCCCCCCCCHHHHHHHHHHHHHhcCCCC
Q psy613          230 ENGRCMTFDQRANGYVRSEGVGVILLKPLKNAIIDNDHIYGIFRGNFENHGGHSSSPTSPNMLAQKQLLIDVYRRANINP  309 (545)
Q Consensus       230 ~~g~~~pfd~~a~G~~~gEGaaavvL~~~~~A~~~g~~i~a~I~g~~~~~~g~~~~~~~p~~~~~~~~i~~al~~Agi~~  309 (545)
                      |+++|||||.+++||++|||++++|||++++|+++|++||++|+|++.++++.+.+.+.|+...+.++++++|++++++|
T Consensus         3 P~~~~rpFD~~adG~v~gEGa~~~vL~~~~~A~~~g~~i~a~i~g~~~~~dg~~~~~~~~~~~~~~~~~~~al~~a~i~~   82 (205)
T d1tqya2           3 PEHASRPFDGTRDGFVLAEGAAMFVLEDYDSALARGARIHAEISGYATRCNAYHMTGLKADGREMAETIRVALDESRTDA   82 (205)
T ss_dssp             GGGCCCTTBTTCCCBCEECEEEEEEEEEHHHHHHTTCCCCEEEEEEEEEECSSCSSCCCTTCHHHHHHHHHHHHHHTCCG
T ss_pred             CCCCCCCccCCCCCEeeEeeEEEEEEeEHHHHHHCCCceEEEEEeeEccccccccCcccccccccchhhhhHHhhhcCCc
Confidence            67899999999999999999999999999999999999999999999999999988899999999999999999999999


Q ss_pred             CCccEEEeccCCCCCCCHHHHHHHHHHhhhcccccCCCCCCCceeecCcccCCCcccchhhHHHHHHHHHhHhcCcccCC
Q psy613          310 YTINYIEAHGTGTKLGDPIEVNGLKSAFSELHEYYKTPLLKPYCGLGSVKANIGHLEAASGVIGVIKVLLMLKYKKIPGN  389 (545)
Q Consensus       310 ~dId~ve~hgtgT~~gD~~E~~al~~~f~~~~~~~~~~~~~~~~~igs~K~~iGH~~~AsG~~~lik~~l~l~~~~ipp~  389 (545)
                      +||+|||+|||||+++|++|+++|.++|+...+         .++|+|+|+++||+++|||+++|+|++++|++++|||+
T Consensus        83 ~~i~~ie~hgtGt~~~D~~E~~ai~~~~~~~~~---------~~~v~s~K~~~GH~~~AsG~~~li~~~~~l~~g~ipp~  153 (205)
T d1tqya2          83 TDIDYINAHGSGTRQNDRHETAAYKRALGEHAR---------RTPVSSIKSMVGHSLGAIGSLEIAACVLALEHGVVPPT  153 (205)
T ss_dssp             GGCCEEECCCCCCHHHHHHHHHHHHHHTGGGGG---------GSCEECTHHHHCBCTTTHHHHHHHHHHHHHHHCEECCB
T ss_pred             cceeeeeccccccccCchhHHHHHHHhhccccC---------CceeeeecccccccccccchhHHHHHHHHHhCCeEccc
Confidence            999999999999999999999999999986321         24599999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCCCCeeeecccccccccCCCCceEEeecccCCCCceEEEEEccccc
Q psy613          390 PHLKIPNSYLKLDNTPFYLVNKTCDWIQLDNNIPRRAGVSSFGVGGSNVHVIIEEYRK  447 (545)
Q Consensus       390 ~~~~~~~~~~~~~~~~~~~~~~~~~w~~~~~~~~r~a~v~sfG~gG~nah~il~~~~~  447 (545)
                      +|++.+||+++++..    +.+..+|      ..|++++|||||||+|+|+||+++++
T Consensus       154 ~~~~~~~p~~~~~~v----~~~~~~~------~~~~a~~~s~GfGG~na~~vl~~~~~  201 (205)
T d1tqya2         154 ANLRTSDPECDLDYV----PLEARER------KLRSVLTVGSGFGGFQSAMVLRDAET  201 (205)
T ss_dssp             TTCCSBBTTBCSCCC----BSSCEEC------CCSEEEEEEEETTTEEEEEEEECHHH
T ss_pred             CCCCCCCCCCCcccC----CCCCcCC------CCCEEEEeCCCCCceeEEEEEeeCCC
Confidence            999999999987643    3444443      36899999999999999999998754
>d1tqyb2 c.95.1.1 (B:210-403) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d2gfva1 c.95.1.1 (A:2-251) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j3na1 c.95.1.1 (A:1-249) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1e5ma1 c.95.1.1 (A:6-255) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d2vbaa1 c.95.1.1 (A:1-253) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d2ix4a1 c.95.1.1 (A:31-300) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d1e5ma2 c.95.1.1 (A:256-416) Beta-ketoacyl-ACP synthase II {Synechocystis sp. [TaxId: 1143]} Back     information, alignment and structure
>d2gfva2 c.95.1.1 (A:252-412) Beta-ketoacyl-ACP synthase II {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1j3na2 c.95.1.1 (A:250-408) Beta-ketoacyl-ACP synthase II {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1ox0a2 c.95.1.1 (A:252-409) Beta-ketoacyl-ACP synthase II {Streptococcus pneumoniae [TaxId: 1313]} Back     information, alignment and structure
>d2ix4a2 c.95.1.1 (A:301-461) Beta-ketoacyl-ACP synthase II {Thale cress (Arabidopsis thaliana), mitochondrial isoform [TaxId: 3702]} Back     information, alignment and structure
>d2vbaa2 c.95.1.1 (A:254-404) Beta-ketoacyl-ACP synthase I {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1tqya1 c.95.1.1 (A:3-218) Actinorhodin polyketide putative beta-ketoacyl synthase 1, KasA {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1tqyb1 c.95.1.1 (B:2-209) Actinorhodin polyketide putative beta-ketoacyl synthase 2, KasB {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1teda_ c.95.1.2 (A:) Polyketide synthase PKS18 {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a1 c.95.1.2 (A:2-173) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1m3ka1 c.95.1.1 (A:1-268) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1hnja1 c.95.1.2 (A:1-174) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja1 c.95.1.2 (A:3-183) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1wdkc1 c.95.1.1 (C:2-263) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1bi5a1 c.95.1.2 (A:1-235) Chalcone synthase {Alfalfa (Medicago sativa) [TaxId: 3879]} Back     information, alignment and structure
>d1ulqa1 c.95.1.1 (A:3-275) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1afwa1 c.95.1.1 (A:25-293) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1u0ma1 c.95.1.2 (A:2-201) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure
>d1ulqa2 c.95.1.1 (A:276-400) Beta-ketoadipyl CoA thiolase {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1afwa2 c.95.1.1 (A:294-417) Thiolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Back     information, alignment and structure
>d1m3ka2 c.95.1.1 (A:269-392) Biosynthetic thiolase {Zoogloea ramigera [TaxId: 350]} Back     information, alignment and structure
>d1xpma1 c.95.1.2 (A:2-167) 3-hydroxy-3-methylglutaryl CoA synthase MvaS {Staphylococcus aureus [TaxId: 1280]} Back     information, alignment and structure
>d1wdkc2 c.95.1.1 (C:264-391) Fatty oxidation complex beta subunit (3-ketoacyl-CoA thiolase) {Pseudomonas fragi [TaxId: 296]} Back     information, alignment and structure
>d1u6ea2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Mycobacterium tuberculosis [TaxId: 1773]} Back     information, alignment and structure
>d1ub7a2 c.95.1.2 (A:174-322) Ketoacyl-ACP synthase III (FabH) {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1hnja2 c.95.1.2 (A:175-317) Ketoacyl-ACP synthase III (FabH) {Escherichia coli [TaxId: 562]} Back     information, alignment and structure
>d1mzja2 c.95.1.2 (A:184-336) Priming beta-ketosynthase from the r1128 polyketide biosynthetic pathway {Streptomyces sp. r1128 [TaxId: 140437]} Back     information, alignment and structure
>d1u0ma2 c.95.1.2 (A:202-349) Putative polyketide synthase SCO1206 {Streptomyces coelicolor [TaxId: 1902]} Back     information, alignment and structure