Psyllid ID: psy6373

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------20
Protein Sequence
MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENGGSSEEEEEEKEKKKEEEEEEEQSRGGNRALRPSTYTRHRHQTSFIDQEVAYMKMTSKKYRMGEDEEEKEEEGTGRVGEGKR
Secondary Structure (PSIPRED)
cccccccccEEEEEEHHHHHHHcccccccccccccccEEEEEEEEEccEEEEEEcccEEEEcccccccccccccccHHcccccEEEEEEccccHHHHHHHcccccccccccccccccccccHHHHHHHHccccHHHHHHHHcccccccccccccccccccccHHHHHHHHHHcccccccccHHHHHHHccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccEcccHHHEcHHHHHHHccccccccEEccccEEEEEEEEEcccEEEEEEcccccEEEEcccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccccccccccHHHHHHHHHHHcccccccHHHccccccccccccccHHcccccHccccccccccccccEEcccccHccccccccccccccc
Coil and Loop (DISEMBL)
mqrtpmiagglfSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQcggsleivpcsrvghvfrkrhpytfpggsgnvfarNTRRAAEVWMDNYKHyyyaevplaktipfgetlnlenggsseeeeEEKEKKKEEEEEEEqsrggnralrpstytrhrhqtSFIDQEVAYMKMTSKkyrmgedeeekeeegtgrvgegkr
Flexible Loop (DISEMBL)
mqrtpmiagglfsIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHpytfpggsgnvfarNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLnlenggsseeeeeekekkkeeeeeeeqsrggnralrpstytrhrhqtsfidqeVAYMKMTSKkyrmgedeeekeeegtgrvgegkr
Low Complexity Region (SEG)
MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENGGSSeeeeeekekkkeeeeeeeQSRGGNRALRPSTYTRHRHQTSFIDQEVAYMKMTSKKYRMgedeeekeeegtgrvgegKR
Disordered region (IsUnstruct)
******IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETL**************************************************************************************
Disordered Region (DISOPRED)
*QRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKR*********GNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG*S***EEEEKEKKKEEEEEEEQSRGGNRALRPS**********FIDQEVAYM*****************************
Disordered Region (DISEMBL)
MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLE******************************ALRPSTYTRHRHQTSFIDQEVAYMKMTSKK***********************
Disordered Region (DISPRO)
*QRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENGGSSEEEEEEKEKKKEEEE**************ST*T***HQTSFIDQEVAYMKMTSKKYRMG*******************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLExxxxxxxxxxxxxxxxxxxxxxxxxxxGNRALRPSTYTRHRHQTSFIDQEVAYMKMTSKKYRMGEDEEEKEEEGTGRVGEGKR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	199	2.2.26 [Sep-21-2011]
Q6WV19	633	Polypeptide N-acetylgalac	yes	N/A	0.552	0.173	0.863	4e-56
Q6PB93	570	Polypeptide N-acetylgalac	yes	N/A	0.552	0.192	0.809	3e-53
Q10471	571	Polypeptide N-acetylgalac	yes	N/A	0.552	0.192	0.8	2e-52
Q8I136	589	Polypeptide N-acetylgalac	no	N/A	0.547	0.185	0.715	8e-46
Q96FL9	552	Polypeptide N-acetylgalac	no	N/A	0.552	0.199	0.7	1e-45
Q8BVG5	550	Polypeptide N-acetylgalac	no	N/A	0.562	0.203	0.669	8e-45
Q9JJ61	558	Putative polypeptide N-ac	no	N/A	0.552	0.197	0.663	2e-41
Q8N428	558	Putative polypeptide N-ac	no	N/A	0.552	0.197	0.663	2e-41
Q6UE39	556	Polypeptide N-acetylgalac	no	N/A	0.552	0.197	0.636	1e-40
Q8CF93	556	Polypeptide N-acetylgalac	no	N/A	0.552	0.197	0.636	2e-40

>sp|Q6WV19|GALT2_DROME Polypeptide N-acetylgalactosaminyltransferase 2 OS=Drosophila melanogaster GN=pgant2 PE=2 SV=2

 Score =  217 bits (552), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 99/110 (90%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTPMIAGGLF ID+ YF KLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 368 RTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 427

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK +YY  VPLAK IPFG  
Sbjct: 428 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNI 477

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. It can both act as a peptide transferase that transfers GalNAc onto unmodified peptide substrates, and as a glycopeptide transferase that requires the prior addition of a GalNAc on a peptide before adding additional GalNAc moieties. Prefers the monoglycosylated Muc5AC-3 as substrate.
Drosophila melanogaster (taxid: 7227)
EC: 2EC: .EC: 4EC: .EC: 1EC: .EC: 4EC: 1

>sp|Q6PB93|GALT2_MOUSE Polypeptide N-acetylgalactosaminyltransferase 2 OS=Mus musculus GN=Galnt2 PE=2 SV=1

 Score =  207 bits (528), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 89/110 (80%), Positives = 99/110 (90%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 301 KTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 360

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RK+HPYTFPGGSG VFARNTRRAAEVWMD YKH+YYA VP A+ +P+G  
Sbjct: 361 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKHFYYAAVPSARNVPYGNI 410

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b. Probably involved in O-linked glycosylation of the immunoglobulin A1 (IgA1) hinge region.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q10471|GALT2_HUMAN Polypeptide N-acetylgalactosaminyltransferase 2 OS=Homo sapiens GN=GALNT2 PE=1 SV=1

 Score =  205 bits (521), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 88/110 (80%), Positives = 99/110 (90%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 302 KTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 361

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RK+HPYTFPGGSG VFARNTRRAAEVWMD YK++YYA VP A+ +P+G  
Sbjct: 362 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYGNI 411

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a broad spectrum of substrates for peptides such as EA2, Muc5AC, Muc1a, Muc1b. Probably involved in O-linked glycosylation of the immunoglobulin A1 (IgA1) hinge region.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q8I136|GALT4_CAEEL Polypeptide N-acetylgalactosaminyltransferase 4 OS=Caenorhabditis elegans GN=gly-4 PE=2 SV=2

 Score =  182 bits (463), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 78/109 (71%), Positives = 93/109 (85%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           R+P +AGGLF+I +++F +LG YD+ M VWGGENLE+SFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 317 RSPTMAGGLFAISKEWFNELGTYDLDMEVWGGENLEMSFRVWQCGGSLEIMPCSRVGHVF 376

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGE 111
           RK+HPYTFPGGSGNVF +NTRRAAEVWMD YK  Y   VP A+ + FG+
Sbjct: 377 RKKHPYTFPGGSGNVFQKNTRRAAEVWMDEYKAIYLKNVPSARFVNFGD 425

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.

Caenorhabditis elegans (taxid: 6239)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q96FL9|GLT14_HUMAN Polypeptide N-acetylgalactosaminyltransferase 14 OS=Homo sapiens GN=GALNT14 PE=2 SV=1

 Score =  182 bits (462), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 77/110 (70%), Positives = 87/110 (79%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTP+IAGGLF ID+ +F+ LGKYDM M +WGGEN EISFRVW CGGSLEIVPCSRVGHVF
Sbjct: 276 RTPIIAGGLFVIDKAWFDYLGKYDMDMDIWGGENFEISFRVWMCGGSLEIVPCSRVGHVF 335

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RK+HPY FP G+ N + +NT+R AEVWMD YK YYYA  P A   PFG  
Sbjct: 336 RKKHPYVFPDGNANTYIKNTKRTAEVWMDEYKQYYYAARPFALERPFGNV 385

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Displays activity toward mucin-derived peptide substrates such as Muc2, Muc5AC, Muc7, and Muc13 (-58). May be involved in O-glycosylation in kidney.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q8BVG5|GLT14_MOUSE Polypeptide N-acetylgalactosaminyltransferase 14 OS=Mus musculus GN=Galnt14 PE=2 SV=2

 Score =  179 bits (455), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 77/115 (66%), Positives = 90/115 (78%), Gaps = 3/115 (2%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTP+IAGGLF ID+ +F+ LGKYD+ M +WGGEN EISFRVW CGG LEI+PCSRVGHVF
Sbjct: 276 RTPIIAGGLFVIDKAWFDYLGKYDVDMDIWGGENFEISFRVWMCGGGLEIIPCSRVGHVF 335

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLEN 117
           RK+HPY FP G+ N + +NT+R AEVWMD YK YYYA  P A   PFG   N+EN
Sbjct: 336 RKKHPYVFPDGNANTYIKNTKRTAEVWMDEYKQYYYAARPFALERPFG---NIEN 387

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Displays activity toward mucin-derived peptide substrates such as Muc2, Muc5AC, Muc7, and Muc13 (-58). May be involved in O-glycosylation in kidney.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q9JJ61|GLTL1_MOUSE Putative polypeptide N-acetylgalactosaminyltransferase-like protein 1 OS=Mus musculus GN=Galntl1 PE=2 SV=2

 Score =  168 bits (426), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 82/110 (74%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTP+IAGG+F ID+ +F  LGKYD  M +WGGEN E+SFRVW CGGSLEIVPCSRVGHVF
Sbjct: 288 RTPVIAGGIFVIDKSWFNHLGKYDAQMDIWGGENFELSFRVWMCGGSLEIVPCSRVGHVF 347

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPY FP G+   + RNT+R AEVWMD YK YYY   P A    FG  
Sbjct: 348 RKRHPYNFPEGNALTYIRNTKRTAEVWMDEYKQYYYEARPSAIGKAFGSV 397

May catalyze the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q8N428|GLTL1_HUMAN Putative polypeptide N-acetylgalactosaminyltransferase-like protein 1 OS=Homo sapiens GN=GALNTL1 PE=2 SV=2

 Score =  168 bits (425), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 73/110 (66%), Positives = 82/110 (74%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTP+IAGG+F ID+ +F  LGKYD  M +WGGEN E+SFRVW CGGSLEIVPCSRVGHVF
Sbjct: 288 RTPVIAGGIFVIDKSWFNHLGKYDAQMDIWGGENFELSFRVWMCGGSLEIVPCSRVGHVF 347

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPY FP G+   + RNT+R AEVWMD YK YYY   P A    FG  
Sbjct: 348 RKRHPYNFPEGNALTYIRNTKRTAEVWMDEYKQYYYEARPSAIGKAFGSV 397

May catalyze the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor.

Homo sapiens (taxid: 9606)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q6UE39|GLT13_RAT Polypeptide N-acetylgalactosaminyltransferase 13 OS=Rattus norvegicus GN=Galnt13 PE=2 SV=1

 Score =  165 bits (418), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 70/110 (63%), Positives = 85/110 (77%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTP +AGGLFSIDR YFE++G YD  M +WGGENLE+SFR+WQCGGSLEIV CS VGHVF
Sbjct: 286 RTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVF 345

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RK  PYTFPGG+G+V  +N RR AEVWMD +K ++Y   P    + +G+ 
Sbjct: 346 RKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDYGDV 395

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a much stronger activity than GALNT1 to transfer GalNAc to mucin peptides, such as Muc5Ac and Muc7. Able to glycosylate SDC3. May be responsible for the synthesis of Tn antigen in neuronal cells.

Rattus norvegicus (taxid: 10116)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

>sp|Q8CF93|GLT13_MOUSE Polypeptide N-acetylgalactosaminyltransferase 13 OS=Mus musculus GN=Galnt13 PE=2 SV=1

 Score =  165 bits (418), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 70/110 (63%), Positives = 85/110 (77%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTP +AGGLFSIDR YFE++G YD  M +WGGENLE+SFR+WQCGGSLEIV CS VGHVF
Sbjct: 286 RTPTMAGGLFSIDRNYFEEIGTYDAGMDIWGGENLEMSFRIWQCGGSLEIVTCSHVGHVF 345

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RK  PYTFPGG+G+V  +N RR AEVWMD +K ++Y   P    + +G+ 
Sbjct: 346 RKATPYTFPGGTGHVINKNNRRLAEVWMDEFKDFFYIISPGVVKVDYGDV 395

Catalyzes the initial reaction in O-linked oligosaccharide biosynthesis, the transfer of an N-acetyl-D-galactosamine residue to a serine or threonine residue on the protein receptor. Has a much stronger activity than GALNT1 to transfer GalNAc to mucin peptides, such as Muc5Ac and Muc7. Able to glycosylate SDC3. Probably responsible for the synthesis of Tn antigen in neuronal cells.

Mus musculus (taxid: 10090)

EC: 2

EC: .

EC: 4

EC: .

EC: 1

EC: .

EC: 4

EC: 1

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
189236651	564	PREDICTED: similar to n-acetylgalactosam	0.552	0.195	0.881	3e-56
242024227	603	UDP-GalNAc:polypeptide N-acetylgalactosa	0.542	0.179	0.888	1e-54
34042922	615	UDP-GalNAc:polypeptide N-acetylgalactosa	0.542	0.175	0.879	2e-54
198474621	639	GA16973 [Drosophila pseudoobscura pseudo	0.552	0.172	0.863	2e-54
195148230	638	GL19517 [Drosophila persimilis] gi|19410	0.552	0.172	0.863	2e-54
194855488	631	GG24441 [Drosophila erecta] gi|190660423	0.552	0.174	0.863	2e-54
195471053	634	GE14879 [Drosophila yakuba] gi|194173921	0.552	0.173	0.863	2e-54
33589464	633	RE02655p [Drosophila melanogaster]	0.552	0.173	0.863	2e-54
62484229	633	polypeptide GalNAc transferase 2, isofor	0.552	0.173	0.863	2e-54
195435185	635	GK14594 [Drosophila willistoni] gi|19416	0.552	0.173	0.863	2e-54

>gi|189236651|ref|XP_969621.2| PREDICTED: similar to n-acetylgalactosaminyltransferase [Tribolium castaneum] gi|270005204|gb|EFA01652.1| hypothetical protein TcasGA2_TC007223 [Tribolium castaneum]

 Score =  223 bits (568), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 97/110 (88%), Positives = 103/110 (93%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTPMIAGGLF I++ YFEKLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 297 RTPMIAGGLFVINKAYFEKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 356

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YKH+YYA VPLAK IPFG+ 
Sbjct: 357 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKHFYYAAVPLAKNIPFGDI 406

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242024227|ref|XP_002432530.1| UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase, putative [Pediculus humanus corporis] gi|212517982|gb|EEB19792.1| UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase, putative [Pediculus humanus corporis]

 Score =  218 bits (555), Expect = 1e-54,   Method: Composition-based stats.
 Identities = 96/108 (88%), Positives = 101/108 (93%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           +TPMIAGGLF IDR YF+ LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 334 KTPMIAGGLFVIDRLYFDTLGKYDMQMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 393

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK YYYA VPLAK+IPFG
Sbjct: 394 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKKYYYAAVPLAKSIPFG 441

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|34042922|gb|AAQ56700.1| UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase [Drosophila melanogaster]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/108 (87%), Positives = 99/108 (91%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTPMIAGGLF ID+ YF KLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 350 RTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 409

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK +YY  VPLAK IPFG
Sbjct: 410 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFG 457

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|198474621|ref|XP_001356764.2| GA16973 [Drosophila pseudoobscura pseudoobscura] gi|198138471|gb|EAL33829.2| GA16973 [Drosophila pseudoobscura pseudoobscura]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 99/110 (90%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTPMIAGGLF ID+ YF KLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 374 RTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 433

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK +YY  VPLAK IPFG  
Sbjct: 434 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNI 483

Source: Drosophila pseudoobscura pseudoobscura

Species: Drosophila pseudoobscura

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195148230|ref|XP_002015077.1| GL19517 [Drosophila persimilis] gi|194107030|gb|EDW29073.1| GL19517 [Drosophila persimilis]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 99/110 (90%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTPMIAGGLF ID+ YF KLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 373 RTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 432

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK +YY  VPLAK IPFG  
Sbjct: 433 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNI 482

Source: Drosophila persimilis

Species: Drosophila persimilis

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|194855488|ref|XP_001968556.1| GG24441 [Drosophila erecta] gi|190660423|gb|EDV57615.1| GG24441 [Drosophila erecta]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 99/110 (90%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTPMIAGGLF ID+ YF KLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 366 RTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 425

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK +YY  VPLAK IPFG  
Sbjct: 426 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNI 475

Source: Drosophila erecta

Species: Drosophila erecta

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195471053|ref|XP_002087820.1| GE14879 [Drosophila yakuba] gi|194173921|gb|EDW87532.1| GE14879 [Drosophila yakuba]

 Score =  217 bits (553), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 99/110 (90%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTPMIAGGLF ID+ YF KLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 369 RTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 428

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK +YY  VPLAK IPFG  
Sbjct: 429 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNI 478

Source: Drosophila yakuba

Species: Drosophila yakuba

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|33589464|gb|AAQ22499.1| RE02655p [Drosophila melanogaster]

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 99/110 (90%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTPMIAGGLF ID+ YF KLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 368 RTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 427

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK +YY  VPLAK IPFG  
Sbjct: 428 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNI 477

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|62484229|ref|NP_608773.2| polypeptide GalNAc transferase 2, isoform A [Drosophila melanogaster] gi|320594323|ref|NP_995625.2| polypeptide GalNAc transferase 2, isoform B [Drosophila melanogaster] gi|195576320|ref|XP_002078024.1| GD22759 [Drosophila simulans] gi|51315875|sp|Q6WV19.2|GALT2_DROME RecName: Full=Polypeptide N-acetylgalactosaminyltransferase 2; Short=pp-GaNTase 2; AltName: Full=Protein-UDP acetylgalactosaminyltransferase 2; AltName: Full=UDP-GalNAc:polypeptide N-acetylgalactosaminyltransferase 2 gi|61678274|gb|AAF51113.3| polypeptide GalNAc transferase 2, isoform A [Drosophila melanogaster] gi|194190033|gb|EDX03609.1| GD22759 [Drosophila simulans] gi|318068299|gb|AAS64620.2| polypeptide GalNAc transferase 2, isoform B [Drosophila melanogaster]

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 99/110 (90%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTPMIAGGLF ID+ YF KLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 368 RTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 427

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK +YY  VPLAK IPFG  
Sbjct: 428 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNI 477

Source: Drosophila melanogaster

Species: Drosophila melanogaster

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|195435185|ref|XP_002065582.1| GK14594 [Drosophila willistoni] gi|194161667|gb|EDW76568.1| GK14594 [Drosophila willistoni]

 Score =  217 bits (552), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 95/110 (86%), Positives = 99/110 (90%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTPMIAGGLF ID+ YF KLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 370 RTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 429

Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK +YY  VPLAK IPFG  
Sbjct: 430 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFGNI 479

Source: Drosophila willistoni

Species: Drosophila willistoni

Genus: Drosophila

Family: Drosophilidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	199
FB|FBgn0031530	633	pgant2 "polypeptide GalNAc tra	0.542	0.170	0.879	4e-51
RGD|1310692	530	Galnt2 "UDP-N-acetyl-alpha-D-g	0.542	0.203	0.814	4.1e-49
UNIPROTKB|F1NDK8	530	GALNT2 "Uncharacterized protei	0.542	0.203	0.814	5.2e-49
UNIPROTKB|F1P835	533	GALNT2 "Uncharacterized protei	0.542	0.202	0.824	6.7e-49
UNIPROTKB|J9P017	504	GALNT2 "Uncharacterized protei	0.542	0.214	0.824	6.7e-49
UNIPROTKB|E1BB48	571	GALNT2 "Uncharacterized protei	0.542	0.189	0.814	1.1e-48
UNIPROTKB|G3V1S6	533	GALNT2 "UDP-N-acetyl-alpha-D-g	0.542	0.202	0.814	1.1e-48
UNIPROTKB|Q10471	571	GALNT2 "Polypeptide N-acetylga	0.542	0.189	0.814	1.1e-48
UNIPROTKB|F1RG44	549	GALNT2 "Uncharacterized protei	0.542	0.196	0.814	1.1e-48
ZFIN|ZDB-GENE-041111-110	565	galnt2 "UDP-N-acetyl-alpha-D-g	0.542	0.191	0.805	1.4e-48

FB|FBgn0031530 pgant2 "polypeptide GalNAc transferase 2" [Drosophila melanogaster (taxid:7227)]

 Score = 531 (192.0 bits), Expect = 4.0e-51, P = 4.0e-51
 Identities = 95/108 (87%), Positives = 99/108 (91%)

Query:     3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
             RTPMIAGGLF ID+ YF KLGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct:   368 RTPMIAGGLFVIDKAYFNKLGKYDMKMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 427

Query:    63 RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
             RKRHPYTFPGGSGNVFARNTRRAAEVWMD+YK +YY  VPLAK IPFG
Sbjct:   428 RKRHPYTFPGGSGNVFARNTRRAAEVWMDDYKQHYYNAVPLAKNIPFG 475

GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=ISS;IDA;NAS

GO:0009312 "oligosaccharide biosynthetic process" evidence=IDA

GO:0005795 "Golgi stack" evidence=NAS

RGD|1310692 Galnt2 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2)" [Rattus norvegicus (taxid:10116)]

 Score = 512 (185.3 bits), Expect = 4.1e-49, P = 4.1e-49
 Identities = 88/108 (81%), Positives = 99/108 (91%)

Query:     3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
             +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct:   261 KTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 320

Query:    63 RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
             RK+HPYTFPGGSG VFARNTRRAAEVWMD +KH+YYA VP A+ +P+G
Sbjct:   321 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEFKHFYYAAVPSARNVPYG 368

GO:0002378 "immunoglobulin biosynthetic process" evidence=ISO

GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=ISO

GO:0005794 "Golgi apparatus" evidence=IEA;ISO

GO:0005795 "Golgi stack" evidence=ISO

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0018242 "protein O-linked glycosylation via serine" evidence=ISO

GO:0018243 "protein O-linked glycosylation via threonine" evidence=ISO

GO:0030145 "manganese ion binding" evidence=ISO

GO:0048471 "perinuclear region of cytoplasm" evidence=ISO

UNIPROTKB|F1NDK8 GALNT2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 511 (184.9 bits), Expect = 5.2e-49, P = 5.2e-49
 Identities = 88/108 (81%), Positives = 99/108 (91%)

Query:     3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
             +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct:   261 KTPMIAGGLFVMDKSYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 320

Query:    63 RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
             RK+HPYTFPGGSG VFARNTRRAAEVWMD YK++YYA VP A+ +P+G
Sbjct:   321 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYG 368

GO:0016021 "integral to membrane" evidence=IEA

GO:0002378 "immunoglobulin biosynthetic process" evidence=IEA

GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0018242 "protein O-linked glycosylation via serine" evidence=IEA

GO:0018243 "protein O-linked glycosylation via threonine" evidence=IEA

GO:0030145 "manganese ion binding" evidence=IEA

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

UNIPROTKB|F1P835 GALNT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 89/108 (82%), Positives = 99/108 (91%)

Query:     3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
             +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEIVPCSRVGHVF
Sbjct:   264 KTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 323

Query:    63 RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
             RK+HPYTFPGGSG VFARNTRRAAEVWMD YK++YYA VP A+ +P+G
Sbjct:   324 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYG 371

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0030145 "manganese ion binding" evidence=IEA

GO:0018243 "protein O-linked glycosylation via threonine" evidence=IEA

GO:0018242 "protein O-linked glycosylation via serine" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=IEA

GO:0002378 "immunoglobulin biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|J9P017 GALNT2 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 510 (184.6 bits), Expect = 6.7e-49, P = 6.7e-49
 Identities = 89/108 (82%), Positives = 99/108 (91%)

Query:     3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
             +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEIVPCSRVGHVF
Sbjct:   235 KTPMIAGGLFVMDKLYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 294

Query:    63 RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
             RK+HPYTFPGGSG VFARNTRRAAEVWMD YK++YYA VP A+ +P+G
Sbjct:   295 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYG 342

GO:0006486 "protein glycosylation" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

UNIPROTKB|E1BB48 GALNT2 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 88/108 (81%), Positives = 99/108 (91%)

Query:     3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
             +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct:   302 KTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 361

Query:    63 RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
             RK+HPYTFPGGSG VFARNTRRAAEVWMD YK++YYA VP A+ +P+G
Sbjct:   362 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYG 409

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0030145 "manganese ion binding" evidence=IEA

GO:0018243 "protein O-linked glycosylation via threonine" evidence=IEA

GO:0018242 "protein O-linked glycosylation via serine" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=IEA

GO:0002378 "immunoglobulin biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

UNIPROTKB|G3V1S6 GALNT2 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 (GalNAc-T2), isoform CRA_b" [Homo sapiens (taxid:9606)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 88/108 (81%), Positives = 99/108 (91%)

Query:     3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
             +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct:   264 KTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 323

Query:    63 RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
             RK+HPYTFPGGSG VFARNTRRAAEVWMD YK++YYA VP A+ +P+G
Sbjct:   324 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYG 371

GO:0016021 "integral to membrane" evidence=IEA

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0006486 "protein glycosylation" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

UNIPROTKB|Q10471 GALNT2 "Polypeptide N-acetylgalactosaminyltransferase 2" [Homo sapiens (taxid:9606)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 88/108 (81%), Positives = 99/108 (91%)

Query:     3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
             +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct:   302 KTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 361

Query:    63 RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
             RK+HPYTFPGGSG VFARNTRRAAEVWMD YK++YYA VP A+ +P+G
Sbjct:   362 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYG 409

GO:0005576 "extracellular region" evidence=IEA

GO:0032580 "Golgi cisterna membrane" evidence=IEA

GO:0000139 "Golgi membrane" evidence=TAS

GO:0016266 "O-glycan processing" evidence=TAS

GO:0043687 "post-translational protein modification" evidence=TAS

GO:0044267 "cellular protein metabolic process" evidence=TAS

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0005795 "Golgi stack" evidence=IDA

GO:0030173 "integral to Golgi membrane" evidence=NAS

GO:0002378 "immunoglobulin biosynthetic process" evidence=IDA

GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=IDA

GO:0018242 "protein O-linked glycosylation via serine" evidence=IDA

GO:0018243 "protein O-linked glycosylation via threonine" evidence=IDA

GO:0048471 "perinuclear region of cytoplasm" evidence=IDA

GO:0030145 "manganese ion binding" evidence=IDA

UNIPROTKB|F1RG44 GALNT2 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 508 (183.9 bits), Expect = 1.1e-48, P = 1.1e-48
 Identities = 88/108 (81%), Positives = 99/108 (91%)

Query:     3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
             +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct:   280 KTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 339

Query:    63 RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
             RK+HPYTFPGGSG VFARNTRRAAEVWMD YK++YYA VP A+ +P+G
Sbjct:   340 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYG 387

GO:0048471 "perinuclear region of cytoplasm" evidence=IEA

GO:0030145 "manganese ion binding" evidence=IEA

GO:0018243 "protein O-linked glycosylation via threonine" evidence=IEA

GO:0018242 "protein O-linked glycosylation via serine" evidence=IEA

GO:0005795 "Golgi stack" evidence=IEA

GO:0004653 "polypeptide N-acetylgalactosaminyltransferase activity" evidence=IEA

GO:0002378 "immunoglobulin biosynthetic process" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

ZFIN|ZDB-GENE-041111-110 galnt2 "UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2" [Danio rerio (taxid:7955)]

 Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
 Identities = 87/108 (80%), Positives = 100/108 (92%)

Query:     3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
             +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct:   290 KTPMIAGGLFVMDKDYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 349

Query:    63 RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
             RK+HPYTFPGGSG VFARNTRRAAEVWMD++K++YYA VP A+ +P+G
Sbjct:   350 RKQHPYTFPGGSGTVFARNTRRAAEVWMDDFKNFYYAAVPSARNVPYG 397

GO:0016757 "transferase activity, transferring glycosyl groups" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

GO:0016740 "transferase activity" evidence=IEA

GO:0016020 "membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q6PB93	GALT2_MOUSE	2, ., 4, ., 1, ., 4, 1	0.8090	0.5527	0.1929	yes	N/A
Q10471	GALT2_HUMAN	2, ., 4, ., 1, ., 4, 1	0.8	0.5527	0.1926	yes	N/A
Q6WV19	GALT2_DROME	2, ., 4, ., 1, ., 4, 1	0.8636	0.5527	0.1737	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	199
cd02510	299	cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the fo	8e-66
TIGR00927	1096	TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger	7e-04
pfam02709	78	pfam02709, Glyco_transf_7C, N-terminal domain of g	0.004

>gnl|CDD|133004 cd02510, pp-GalNAc-T, pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

 Score =  203 bits (520), Expect = 8e-66
 Identities = 72/109 (66%), Positives = 87/109 (79%), Gaps = 2/109 (1%)

Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           R+P +AGGLF+IDR++F +LG YD  M +WGGENLE+SF+VWQCGGS+EIVPCSRVGH+F
Sbjct: 167 RSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIF 226

Query: 63  R-KRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
           R KR PYTFPGGSG V  RN +R AEVWMD YK Y+Y   P  + I +G
Sbjct: 227 RRKRKPYTFPGGSGTV-LRNYKRVAEVWMDEYKEYFYKARPELRNIDYG 274

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins. Length = 299

>gnl|CDD|233191 TIGR00927, 2A1904, K+-dependent Na+/Ca+ exchanger

 Score = 39.6 bits (92), Expect = 7e-04
 Identities = 17/24 (70%), Positives = 23/24 (95%)

Query: 117 NGGSSEEEEEEKEKKKEEEEEEEQ 140
           +GG SEEEEEE+E+++EEEEEEE+
Sbjct: 859 DGGDSEEEEEEEEEEEEEEEEEEE 882

[Transport and binding proteins, Cations and iron carrying compounds]. Length = 1096

>gnl|CDD|217196 pfam02709, Glyco_transf_7C, N-terminal domain of galactosyltransferase

 Score = 34.5 bits (80), Expect = 0.004
 Identities = 11/50 (22%), Positives = 23/50 (46%)

Query: 7  IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCS 56
            GG+ +  ++ F K+  +      WGGE+ ++  R+   G  +E    +
Sbjct: 19 YFGGVLAFSKEDFLKVNGFSNNFWGWGGEDDDLYARLLLAGLKIERPKFA 68

This is the N-terminal domain of a family of galactosyltransferases from a wide range of Metazoa with three related galactosyltransferases activities, all three of which are possessed by one sequence in some cases. EC:2.4.1.90, N-acetyllactosamine synthase; EC:2.4.1.38, Beta-N-acetylglucosaminyl-glycopeptide beta-1,4- galactosyltransferase; and EC:2.4.1.22 Lactose synthase. Note that N-acetyllactosamine synthase is a component of Lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin EC:2.4.1.90 is the catalyzed reaction. Length = 78

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	199
KOG3736|consensus	578		100.0
KOG3738|consensus	559		100.0
KOG3737|consensus	603		100.0
cd02510	299	pp-GalNAc-T pp-GalNAc-T initiates the formation of	99.94
PF02709	78	Glyco_transf_7C: N-terminal domain of galactosyltr	99.46
PF10111	281	Glyco_tranf_2_2: Glycosyltransferase like family 2	99.19
cd00899	219	b4GalT Beta-4-Galactosyltransferase is involved in	98.97
cd06420	182	GT2_Chondriotin_Pol_N N-terminal domain of Chondro	98.92
COG1216	305	Predicted glycosyltransferases [General function p	98.81
TIGR01556	281	rhamnosyltran L-rhamnosyltransferase. Rhamnolipids	98.68
cd04186	166	GT_2_like_c Subfamily of Glycosyltransferase Famil	98.62
cd02526	237	GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl tr	98.61
PF13641	228	Glyco_tranf_2_3: Glycosyltransferase like family 2	98.43
cd02525	249	Succinoglycan_BP_ExoA ExoA is involved in the bios	98.35
cd06435	236	CESA_NdvC_like NdvC_like proteins in this family a	98.29
cd04185	202	GT_2_like_b Subfamily of Glycosyltransferase Famil	98.22
PF13632	193	Glyco_trans_2_3: Glycosyl transferase family group	98.22
cd04184	202	GT2_RfbC_Mx_like Myxococcus xanthus RfbC like prot	98.18
cd02522	221	GT_2_like_a GT_2_like_a represents a glycosyltrans	98.11
cd02520	196	Glucosylceramide_synthase Glucosylceramide synthas	98.01
cd06421	234	CESA_CelA_like CESA_CelA_like are involved in the	98.01
cd06437	232	CESA_CaSu_A2 Cellulose synthase catalytic subunit	97.97
PRK11204	420	N-glycosyltransferase; Provisional	97.86
cd04192	229	GT_2_like_e Subfamily of Glycosyltransferase Famil	97.84
cd06433	202	GT_2_WfgS_like WfgS and WfeV are involved in O-ant	97.82
cd06913	219	beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltran	97.73
cd06427	241	CESA_like_2 CESA_like_2 is a member of the cellulo	97.65
PRK14583	444	hmsR N-glycosyltransferase; Provisional	97.59
TIGR03469	384	HonB hopene-associated glycosyltransferase HpnB. T	97.37
TIGR03472	373	HpnI hopanoid biosynthesis associated glycosyl tra	97.35
cd06442	224	DPM1_like DPM1_like represents putative enzymes si	97.3
KOG3588|consensus	494		97.15
TIGR03111	439	glyc2_xrt_Gpos1 putative glycosyltransferase TIGR0	97.07
KOG3916|consensus	372		97.04
PF13712	217	Glyco_tranf_2_5: Glycosyltransferase like family;	96.78
PF13506	175	Glyco_transf_21: Glycosyl transferase family 21	96.46
COG1215	439	Glycosyltransferases, probably involved in cell wa	96.33
PLN02726	243	dolichyl-phosphate beta-D-mannosyltransferase	96.24
PRK11498	852	bcsA cellulose synthase catalytic subunit; Provisi	96.14
TIGR03030	713	CelA cellulose synthase catalytic subunit (UDP-for	96.12
cd06439	251	CESA_like_1 CESA_like_1 is a member of the cellulo	96.06
cd04190	244	Chitin_synth_C C-terminal domain of Chitin Synthas	95.79
cd06434	235	GT2_HAS Hyaluronan synthases catalyze polymerizati	95.74
COG4092	346	Predicted glycosyltransferase involved in capsule	95.72
PRK14716	504	bacteriophage N4 adsorption protein B; Provisional	95.68
cd04196	214	GT_2_like_d Subfamily of Glycosyltransferase Famil	95.09
cd04191	254	Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elon	94.77
PF11397	343	GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IP	94.58
PF05679	499	CHGN: Chondroitin N-acetylgalactosaminyltransferas	94.54
cd04188	211	DPG_synthase DPG_synthase is involved in protein N	88.81
PRK11234	727	nfrB bacteriophage N4 adsorption protein B; Provis	87.28
PRK10018	279	putative glycosyl transferase; Provisional	84.44
KOG3917|consensus	310		81.96

>KOG3736|consensus

Probab=100.00  E-value=9.3e-50  Score=379.50  Aligned_cols=118  Identities=59%  Similarity=1.136  Sum_probs=114.9

Q ss_pred             CCCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhh
Q psy6373           1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFAR   80 (199)
Q Consensus         1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~R   80 (199)
                      |+|||+|+||+|||+|.||.+||+||+||++|||||+|||||||||||+|+++||||||||||+..||++|.+. .++.+
T Consensus       309 PirsPtMaGglFAI~r~yF~eiG~yD~gMdiwGGENlElSfrvWqCGG~lei~PCSrVGHifRk~~pY~~p~~~-~~~~~  387 (578)
T KOG3736|consen  309 PIRSPTMAGGLFAIDRKYFGELGSYDEGMDIWGGENLELSFRVWQCGGRLEIVPCSRVGHIFRKRKPYTFPDGT-DTATR  387 (578)
T ss_pred             CcCCcccCCceEEeeHHHHhhccCccccccccChhhceeeEEEeccCCeEEecCccceeeeeecCCCccCCCcc-hhhhh
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999776 88999


Q ss_pred             hHHHHHHhhhccccceeecccCCCCCCCCCCCcccccCC
Q psy6373          81 NTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENGG  119 (199)
Q Consensus        81 N~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~~  119 (199)
                      |++|+|||||||||++||.++|.+..+|+||||+++.|-
T Consensus       388 N~~RlAeVWmDeyK~~~y~~~P~~~~~d~GDvseR~~LR  426 (578)
T KOG3736|consen  388 NLKRLAEVWMDEYKEQFYKRMPGLRNIDEGDLTERKALR  426 (578)
T ss_pred             chhhhhhhhhHHHHHHHHhhCccccccCCCCchhHHHHH
Confidence            999999999999999999999999999999999999874

>KOG3738|consensus

Probab=100.00  E-value=1.4e-47  Score=355.50  Aligned_cols=118  Identities=71%  Similarity=1.341  Sum_probs=115.6

Q ss_pred             CCCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhh
Q psy6373           1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFAR   80 (199)
Q Consensus         1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~R   80 (199)
                      |+|||+|+||+|+|+|.||++||.||..|.+|||||+|||||||||||+++|||||||||+||++|||.||.+++.+.++
T Consensus       287 PirtP~iAGGlfvidk~wF~~LGkyd~~mdiWGGEn~ElsfrvW~CGGslEIvPCSRVGHVFRkrHpy~FP~gs~~ty~~  366 (559)
T KOG3738|consen  287 PIRTPAIAGGLFVIDKEWFNELGKYDMDMDIWGGENLELSFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNTYIK  366 (559)
T ss_pred             cccCccccceeEEecHHHHHHhcccCccccccCCcceEEEEEEEeeCCeeEEEeccchhhhhhccCCCcCCCCCCcchhh
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hHHHHHHhhhccccceeecccCCCCCCCCCCCcccccC
Q psy6373          81 NTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG  118 (199)
Q Consensus        81 N~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~  118 (199)
                      |..|+|||||||||.+||..+|.++.+.||||.++.++
T Consensus       367 NTkr~AEvWmDEYK~~yyaarPsAr~vpfg~i~~rL~~  404 (559)
T KOG3738|consen  367 NTKRAAEVWMDEYKNYYYAARPSARRVPFGNIYDRLEL  404 (559)
T ss_pred             cchHHHHHHHHHHHHHHHhcCchhhcCCCccHHHHHHH
Confidence            99999999999999999999999999999999998764

>KOG3737|consensus

Probab=100.00  E-value=1.3e-41  Score=316.07  Aligned_cols=118  Identities=45%  Similarity=0.942  Sum_probs=111.2

Q ss_pred             CCCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCC----ch
Q psy6373           1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGS----GN   76 (199)
Q Consensus         1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~----~~   76 (199)
                      |+|||+++||+|||+|.||.+||.||||+.+|||||+|||||+|+|||.|++||||||||+||+..||++..-.    ..
T Consensus       327 PyRSPthAGGLfAInRe~F~ELG~YDpgLqiWGGEnfElSfKIWQCGG~i~fVPCSrVGHvYR~~mpy~fgk~~~k~~~p  406 (603)
T KOG3737|consen  327 PYRSPTHAGGLFAINREFFFELGLYDPGLQIWGGENFELSFKIWQCGGKILFVPCSRVGHVYRSLMPYQFGKPPIKVGSP  406 (603)
T ss_pred             CCCCcccccceeeehHHHHHHhccCCCcceeecCcceeEEEEEEeeCCEEEEEEccccchhhhccccccCCCCccccCCC
Confidence            78999999999999999999999999999999999999999999999999999999999999999999973211    35


Q ss_pred             hhhhhHHHHHHhhhccccceeecccCCCCCCCCCCCcccccC
Q psy6373          77 VFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG  118 (199)
Q Consensus        77 ~i~RN~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~  118 (199)
                      .+..|++||+++||||||++||.+.|.++.+++||||+|+.+
T Consensus       407 ~i~iNy~RVvetW~Ddyk~YfytreP~a~~l~~GDISeqlal  448 (603)
T KOG3737|consen  407 PILINYVRVVETWWDDYKDYFYTREPEAQALPYGDISEQLAL  448 (603)
T ss_pred             ceEeehhhHHHHHHHhhhhheeecChhhccCCcccHHHHHHh
Confidence            788999999999999999999999999999999999998866

>cd02510 pp-GalNAc-T pp-GalNAc-T initiates the formation of mucin-type O-linked glycans

Probab=99.94  E-value=2.1e-27  Score=200.87  Aligned_cols=117  Identities=60%  Similarity=1.183  Sum_probs=107.8

Q ss_pred             CCCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec-cCCCCCCCCCCchhhh
Q psy6373           1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR-KRHPYTFPGGSGNVFA   79 (199)
Q Consensus         1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR-~~~PY~~p~g~~~~i~   79 (199)
                      |.++|+++|+||+|+|++|.++||||++|..||+||+|||+|+|+||+++.++|+++|.|+++ ...||..+... ..+.
T Consensus       165 ~~~~~~~~g~~~~irr~~~~~vGgfDe~~~~~~~ED~Dl~~R~~~~G~~i~~~p~a~v~H~~~~~~~~~~~~~~~-~~~~  243 (299)
T cd02510         165 PIRSPTMAGGLFAIDREWFLELGGYDEGMDIWGGENLELSFKVWQCGGSIEIVPCSRVGHIFRRKRKPYTFPGGS-GTVL  243 (299)
T ss_pred             CccCccccceeeEEEHHHHHHhCCCCCcccccCchhHHHHHHHHHcCCeEEEeeccEEEEeccccCCCCCCCCcc-cHHH
Confidence            357899999999999999999999999999999999999999999999999999999999999 78899877543 2678


Q ss_pred             hhHHHHHHhhhccccceeecccCCCCCCCCCCCcccccC
Q psy6373          80 RNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG  118 (199)
Q Consensus        80 RN~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~  118 (199)
                      +|..|++++|+|+++.+||.++|.+..++.||+++++.+
T Consensus       244 ~n~~r~~~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  282 (299)
T cd02510         244 RNYKRVAEVWMDEYKEYFYKARPELRNIDYGDLSERKAL  282 (299)
T ss_pred             HHHHHHHHHHHHHHHHHHHhcCcccccCCCCCHHHHHHH
Confidence            999999999999999999999998888999999888754

UDP-GalNAc: polypeptide alpha-N-acetylgalactosaminyltransferases (pp-GalNAc-T) initiate the formation of mucin-type, O-linked glycans by catalyzing the transfer of alpha-N-acetylgalactosamine (GalNAc) from UDP-GalNAc to hydroxyl groups of Ser or Thr residues of core proteins to form the Tn antigen (GalNAc-a-1-O-Ser/Thr). These enzymes are type II membrane proteins with a GT-A type catalytic domain and a lectin domain located on the lumen side of the Golgi apparatus. In human, there are 15 isozymes of pp-GalNAc-Ts, representing the largest of all glycosyltransferase families. Each isozyme has unique but partially redundant substrate specificity for glycosylation sites on acceptor proteins.

>PF02709 Glyco_transf_7C: N-terminal domain of galactosyltransferase; InterPro: IPR003859 This is a family of galactosyltransferases from a wide range of metazoa with three related galactosyltransferase activities; all three of which are possessed by one sequence in some cases

Probab=99.46  E-value=3.7e-14  Score=104.11  Aligned_cols=61  Identities=34%  Similarity=0.645  Sum_probs=48.3

Q ss_pred             CCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE-Eeeec
Q psy6373           3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV-GHVFR   63 (199)
Q Consensus         3 rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV-gHifR   63 (199)
                      ..|.+.||+|+|+|+.|.+|||||+.|.+||+||.||+.|+|.+|.++..+|++.+ .|+++
T Consensus        15 ~~~~~~Gg~~~~~~~~f~~vnGfde~f~gWG~ED~Dl~~Rl~~~g~~~~~~~~~~~~yh~~~   76 (78)
T PF02709_consen   15 PYPNFFGGVFAISREDFEKVNGFDERFWGWGGEDDDLYNRLWKAGLKIVRVPGSIGRYHLWK   76 (78)
T ss_dssp             SSTT---SEEEEEHHHHHHTTSS-SS-TSCSSHHHHHHHHHHHTT---B-SSTTTTEEEEEE
T ss_pred             cCCCeeEEEEEEeHHHHHHcCCCCccccccCccHHHHHHHHHHcCCeEEecCCceEEEEEee
Confidence            45788999999999999999999999999999999999999999999999999888 48874

The three functions are N-acetyllactosamine synthase (2.4.1.90 from EC); beta-N-acetylglucosaminyl-glycopeptide beta-1,4-galactosyltransferase (2.4.1.38 from EC); and lactose synthase (2.4.1.22 from EC). Note that N-acetyllactosamine synthase is a component of lactose synthase along with alpha-lactalbumin, in the absence of alpha-lactalbumin N-acetyllactosamine synthase is used.; GO: 0016757 transferase activity, transferring glycosyl groups, 0005975 carbohydrate metabolic process; PDB: 2AGD_B 3EE5_A 2AE7_B 2AEC_A 2FYA_A 2AES_B 2AH9_A 2FYB_A 2FY7_A 3LW6_A ....

>PF10111 Glyco_tranf_2_2: Glycosyltransferase like family 2; InterPro: IPR019290 This conserved domain is found in a set of prokaryotic proteins including putative glucosyltransferases, which are involved in bacterial capsule biosynthesis [, ]

Probab=99.19  E-value=2.6e-11  Score=103.91  Aligned_cols=87  Identities=22%  Similarity=0.245  Sum_probs=68.6

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhhHHH
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTRR   84 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~lR   84 (199)
                      .+++|+|++|+|+.|.++||||+.|.+||+||+||++|+..+|..+...|...+.|..+....|        ...|+.++
T Consensus       166 ~~~~s~~~~i~r~~f~~iGGfDE~f~G~G~ED~D~~~RL~~~~~~~~~~~~~~~~~~~~~~~~~--------~g~R~~~~  237 (281)
T PF10111_consen  166 IAFASSCFLINREDFLEIGGFDERFRGWGYEDIDFGYRLKKAGYKFKRSPDYLVYHSHRWPIKY--------KGFRAYFS  237 (281)
T ss_pred             ccccceEEEEEHHHHHHhCCCCccccCCCcchHHHHHHHHHcCCcEecChHHhcccccCCCccc--------hHHHHHHH
Confidence            3556799999999999999999999999999999999999999999999999998875543221        23566666


Q ss_pred             HHHhhhccccceeec
Q psy6373          85 AAEVWMDNYKHYYYA   99 (199)
Q Consensus        85 vAEVWmDEYK~~fY~   99 (199)
                      ..-..+-.++-++|.
T Consensus       238 ~~~~~~~~~~~~~~h  252 (281)
T PF10111_consen  238 YYGLPWFFEGIYMFH  252 (281)
T ss_pred             HhhhHHHhcCceEEE
Confidence            655555555555443

>cd00899 b4GalT Beta-4-Galactosyltransferase is involved in the formation of the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids

Probab=98.97  E-value=7.6e-10  Score=95.78  Aligned_cols=63  Identities=21%  Similarity=0.348  Sum_probs=56.6

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeec--ceEEeeeccCCC
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPC--SRVGHVFRKRHP   67 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPC--SRVgHifR~~~P   67 (199)
                      +.+.||++|++|+.|.+++|||++|.+||+||.||+.|+|..|..+.-.+.  .++.|+++...|
T Consensus       109 ~~~~Gg~~~~~k~~f~~VNGf~n~f~GWGgEDdd~~~Rl~~~g~~~~r~~~~~~~~~hL~H~~~~  173 (219)
T cd00899         109 KTYFGGVLALTREQFRKVNGFSNAYWGWGGEDDDLYNRIKAAGLKITRPSGDTGRYKMIRHIHDK  173 (219)
T ss_pred             ccccccceeeEHHHHHHhCCcCCcCccCCcchHHHHHHHHHCCCeEEeccCcccceeeeecCCCc
Confidence            567899999999999999999999999999999999999999999999985  557788776543

Beta-4-Galactosyltransferase transfers galactose from uridine diphosphogalactose to the terminal beta-N-acetylglucosamine residues, hereby forming the poly-N-acetyllactosamine core structures present in glycoproteins and glycosphingolipids. At least seven homologous beta-4-galactosyltransferase isoforms have been identified that use different types of glycoproteins and glycolipids as substrates. Of the seven identified members of the beta-1,4-galactosyltransferase subfamily (beta1,4-Gal-T1 to -T7), b1,4-Gal-T1 is most characterized (biochemically). It is a Golgi-resident type II membrane enzyme with a cytoplasmic domain, membrane spanning region, and a stem region and catalytic domain facing the lumen.

>cd06420 GT2_Chondriotin_Pol_N N-terminal domain of Chondroitin polymerase functions as a GalNAc transferase

Probab=98.92  E-value=1.6e-09  Score=83.02  Aligned_cols=57  Identities=25%  Similarity=0.354  Sum_probs=51.2

Q ss_pred             eeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcC-CcEEEeecceEEeee
Q psy6373           6 MIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCG-GSLEIVPCSRVGHVF   62 (199)
Q Consensus         6 ~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCG-G~i~ivPCSRVgHif   62 (199)
                      ...|+.+++.|..|.++||||+.+..||+||+||++|+|.+| ....+.|.+.+.|++
T Consensus       125 ~~~~~~~~~~r~~~~~~ggf~~~~~~~~~eD~~l~~r~~~~g~~~~~~~~~~~~~h~~  182 (182)
T cd06420         125 GIRGCNMSFWKKDLLAVNGFDEEFTGWGGEDSELVARLLNSGIKFRKLKFAAIVFHLW  182 (182)
T ss_pred             EeccceEEEEHHHHHHhCCCCcccccCCcchHHHHHHHHHcCCcEEEecccceeeecC
Confidence            456889999999999999999999999999999999999999 566666699999975

Chondroitin polymerase is a two domain, bi-functional protein. The N-terminal domain functions as a GalNAc transferase. The bacterial chondroitin polymerase catalyzes elongation of the chondroitin chain by alternatively transferring the GlcUA and GalNAc moiety from UDP-GlcUA and UDP-GalNAc to the non-reducing ends of the chondroitin chain. The enzyme consists of N-terminal and C-terminal domains in which the two active sites catalyze the addition of GalNAc and GlcUA, respectively. Chondroitin chains range from 40 to over 100 repeating units of the disaccharide. Sulfated chondroitins are involved in the regulation of various biological functions such as central nervous system development, wound repair, infection, growth factor signaling, and morphogenesis, in addition to its conventional structural roles. In Caenorhabditis elegans, chondroitin is an essential factor for the worm

>COG1216 Predicted glycosyltransferases [General function prediction only]

Probab=98.81  E-value=4.1e-09  Score=91.00  Aligned_cols=59  Identities=24%  Similarity=0.442  Sum_probs=55.1

Q ss_pred             eeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccC
Q psy6373           6 MIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKR   65 (199)
Q Consensus         6 ~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~   65 (199)
                      .+.|+|+.|+|+.|.++|+||+.+++| .||+|+|+|+++.|.++.++|.+.|.|.-...
T Consensus       166 ~~~G~~~li~~~~~~~vG~~de~~F~y-~eD~D~~~R~~~~G~~i~~~p~a~i~H~~g~s  224 (305)
T COG1216         166 SLSGACLLIRREAFEKVGGFDERFFIY-YEDVDLCLRARKAGYKIYYVPDAIIYHKIGSS  224 (305)
T ss_pred             hcceeeeEEcHHHHHHhCCCCccccee-ehHHHHHHHHHHcCCeEEEeeccEEEEeccCC
Confidence            378999999999999999999999999 79999999999999999999999999976543

>TIGR01556 rhamnosyltran L-rhamnosyltransferase

Probab=98.68  E-value=3e-08  Score=83.14  Aligned_cols=51  Identities=25%  Similarity=0.272  Sum_probs=47.5

Q ss_pred             EEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373          12 FSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR   63 (199)
Q Consensus        12 FAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR   63 (199)
                      ++|+|+.|.++|+||+.|++| ++|+|+++|++..|.++.++|.+.+.|...
T Consensus       153 ~li~~~~~~~iG~fde~~fi~-~~D~e~~~R~~~~G~~i~~~~~~~~~H~~g  203 (281)
T TIGR01556       153 CLITREVYQRLGMMDEELFID-HVDTEWSLRAQNYGIPLYIDPDIVLEHRIG  203 (281)
T ss_pred             ceeeHHHHHHhCCccHhhccc-chHHHHHHHHHHCCCEEEEeCCEEEEEecC
Confidence            469999999999999999998 599999999999999999999999999753

Rhamnolipids are glycolipids containing mono- or di- L-rhamnose molecules. Rhamnolipid synthesis occurs by sequential glycosyltransferase reactions involving two distinct rhamnosyltransferase enzymes. In P.aeruginosa, the synthesis of mono-rhamnolipids is catalyzed by rhamnosyltransferase 1, and proceeds by a glycosyltransfer reaction catalyzed by rhamnosyltransferase 2 to yield di-rhamnolipids.

>cd04186 GT_2_like_c Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.62  E-value=4.3e-08  Score=72.72  Aligned_cols=54  Identities=22%  Similarity=0.426  Sum_probs=50.7

Q ss_pred             eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373           7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV   61 (199)
Q Consensus         7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi   61 (199)
                      ..|++++++|+.|.++|+||+.+.. ++||++|++|++..|.++.++|++.|.|.
T Consensus       112 ~~~~~~~~~~~~~~~~~~~~~~~~~-~~eD~~~~~~~~~~g~~i~~~~~~~~~h~  165 (166)
T cd04186         112 VSGAFLLVRREVFEEVGGFDEDFFL-YYEDVDLCLRARLAGYRVLYVPQAVIYHH  165 (166)
T ss_pred             CceeeEeeeHHHHHHcCCCChhhhc-cccHHHHHHHHHHcCCeEEEccceEEEec
Confidence            4689999999999999999999877 57999999999999999999999999996

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02526 GT2_RfbF_like RfbF is a putative dTDP-rhamnosyl transferase

Probab=98.61  E-value=6.2e-08  Score=77.45  Aligned_cols=58  Identities=19%  Similarity=0.198  Sum_probs=51.4

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR   63 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR   63 (199)
                      +...+++++++|+.|.++||||+.+. .++||+||++|++++|.++.++|+..|.|...
T Consensus       149 ~~~~~~~~~~rr~~~~~~ggfd~~~~-~~~eD~d~~~r~~~~G~~~~~~~~~~v~h~~~  206 (237)
T cd02526         149 DFLITSGSLISLEALEKVGGFDEDLF-IDYVDTEWCLRARSKGYKIYVVPDAVLKHELG  206 (237)
T ss_pred             eeeeccceEEcHHHHHHhCCCCHHHc-CccchHHHHHHHHHcCCcEEEEcCeEEEeccc
Confidence            34456678899999999999999997 45799999999999999999999999998754

Shigella flexneri RfbF protein is a putative dTDP-rhamnosyl transferase. dTDP rhamnosyl transferases of Shigella flexneri add rhamnose sugars to N-acetyl-glucosamine in the O-antigen tetrasaccharide repeat. Lipopolysaccharide O antigens are important virulence determinants for many bacteria. The variations of sugar composition, the sequence of the sugars and the linkages in the O antigen provide structural diversity of the O antigen.

>PF13641 Glyco_tranf_2_3: Glycosyltransferase like family 2; PDB: 4FIY_B 4FIX_A

Probab=98.43  E-value=3.4e-07  Score=72.98  Aligned_cols=57  Identities=21%  Similarity=0.377  Sum_probs=41.9

Q ss_pred             CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR   63 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR   63 (199)
                      .+.+.|++++++|+.|.++|+||+  ... +||++|++|++..|+++.++|...|.|..+
T Consensus       156 ~~~~~G~~~~~rr~~~~~~g~fd~--~~~-~eD~~l~~r~~~~G~~~~~~~~~~v~~~~~  212 (228)
T PF13641_consen  156 VAFLSGSGMLFRRSALEEVGGFDP--FIL-GEDFDLCLRLRAAGWRIVYAPDALVYHEEP  212 (228)
T ss_dssp             -S-B--TEEEEEHHHHHHH-S--S--SSS-SHHHHHHHHHHHTT--EEEEEEEEEEE--S
T ss_pred             eeeccCcEEEEEHHHHHHhCCCCC--CCc-ccHHHHHHHHHHCCCcEEEECCcEEEEeCC
Confidence            456789999999999999999999  444 499999999999999999999999998854

>cd02525 Succinoglycan_BP_ExoA ExoA is involved in the biosynthesis of succinoglycan

Probab=98.35  E-value=6.4e-07  Score=71.26  Aligned_cols=57  Identities=25%  Similarity=0.314  Sum_probs=51.2

Q ss_pred             eeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeecc
Q psy6373           6 MIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRK   64 (199)
Q Consensus         6 ~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~   64 (199)
                      ..+|++++++|+.|.++|+||+.+. + +||.||++|++.+|+++.++|...+.|..++
T Consensus       155 ~~~~~~~~~~~~~~~~~g~~~~~~~-~-~eD~~l~~r~~~~G~~~~~~~~~~~~~~~~~  211 (249)
T cd02525         155 VDTVHHGAYRREVFEKVGGFDESLV-R-NEDAELNYRLRKAGYKIWLSPDIRVYYYPRS  211 (249)
T ss_pred             ccccccceEEHHHHHHhCCCCcccC-c-cchhHHHHHHHHcCcEEEEcCCeEEEEcCCC
Confidence            5678889999999999999999975 3 6999999999999999999999999987653

Succinoglycan Biosynthesis Protein ExoA catalyzes the formation of a beta-1,3 linkage of the second sugar (glucose) of the succinoglycan with the galactose on the lipid carrie. Succinoglycan is an acidic exopolysaccharide that is important for invasion of the nodules. Succinoglycan is a high-molecular-weight polymer composed of repeating octasaccharide units. These units are synthesized on membrane-bound isoprenoid lipid carriers, beginning with galactose followed by seven glucose molecules, and modified by the addition of acetate, succinate, and pyruvate. ExoA is a membrane protein with a transmembrance domain at c-terminus.

>cd06435 CESA_NdvC_like NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase

Probab=98.29  E-value=7.6e-07  Score=71.58  Aligned_cols=54  Identities=20%  Similarity=0.184  Sum_probs=47.5

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV   61 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi   61 (199)
                      ...+|++++++|+.|.++||||+.+   .+||++|++|++..|.++.++|.+.+.|.
T Consensus       156 ~~~~g~~~~~rr~~~~~iGgf~~~~---~~eD~dl~~r~~~~G~~~~~~~~~~~~~~  209 (236)
T cd06435         156 IIQHGTMCLIRRSALDDVGGWDEWC---ITEDSELGLRMHEAGYIGVYVAQSYGHGL  209 (236)
T ss_pred             eEEecceEEEEHHHHHHhCCCCCcc---ccchHHHHHHHHHCCcEEEEcchhhccCc
Confidence            3457888999999999999999875   37999999999999999999999877543

NdvC_like proteins in this family are putative bacterial beta-(1,6)-glucosyltransferase. Bradyrhizobium japonicum synthesizes periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans during growth under hypoosmotic conditions. Two genes (ndvB, ndvC) are involved in the beta-(1, 3), beta-(1,6)-glucan synthesis. The ndvC mutant strain resulted in synthesis of altered cyclic beta-glucans composed almost entirely of beta-(1, 3)-glycosyl linkages. The periplasmic cyclic beta-(1,3),beta-(1,6)-D-glucans function for osmoregulation. The ndvC mutation also affects the ability of the bacteria to establish a successful symbiotic interaction with host plant. Thus, the beta-glucans may function as suppressors of a host defense response.

>cd04185 GT_2_like_b Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=98.22  E-value=1.7e-06  Score=67.96  Aligned_cols=55  Identities=27%  Similarity=0.369  Sum_probs=49.7

Q ss_pred             cceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccC
Q psy6373           9 GGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKR   65 (199)
Q Consensus         9 GGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~   65 (199)
                      ++.++++|+.|.++|+||+.+.+|| ||+++++|++..|.++ ++|.+.+.|.....
T Consensus       123 ~~~~~~~~~~~~~~g~~~~~~~~~~-eD~~~~~r~~~~G~~i-~~~~~~~~h~~~~~  177 (202)
T cd04185         123 FVGVLISRRVVEKIGLPDKEFFIWG-DDTEYTLRASKAGPGI-YVPDAVVVHKTAIN  177 (202)
T ss_pred             eEEEEEeHHHHHHhCCCChhhhccc-hHHHHHHHHHHcCCcE-EecceEEEEccccc
Confidence            3557899999999999999998885 9999999999999999 99999999987643

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>PF13632 Glyco_trans_2_3: Glycosyl transferase family group 2

Probab=98.22  E-value=2.3e-06  Score=67.36  Aligned_cols=57  Identities=23%  Similarity=0.400  Sum_probs=49.6

Q ss_pred             CCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373           3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV   61 (199)
Q Consensus         3 rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi   61 (199)
                      .+..++|++++++++.+.++|+|| ..... +||.++++|+++.|.++.++|.+.+.|.
T Consensus        68 ~~~~~~G~~~~~r~~~l~~vg~~~-~~~~~-~ED~~l~~~l~~~G~~~~~~~~~~~~~~  124 (193)
T PF13632_consen   68 RPLFLSGSGMLFRREALREVGGFD-DPFSI-GEDMDLGFRLRRAGYRIVYVPDAIVYTE  124 (193)
T ss_pred             CCccccCcceeeeHHHHHHhCccc-ccccc-cchHHHHHHHHHCCCEEEEecccceeee
Confidence            345678999999999999999999 66667 4999999999999999999999877554

>cd04184 GT2_RfbC_Mx_like Myxococcus xanthus RfbC like proteins are required for O-antigen biosynthesis

Probab=98.18  E-value=1.3e-06  Score=67.99  Aligned_cols=50  Identities=16%  Similarity=0.356  Sum_probs=43.6

Q ss_pred             eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373           7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV   58 (199)
Q Consensus         7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV   58 (199)
                      ..+++.+++|+.|.++||||+++.  ++||.||++|++.+|+++.++|...+
T Consensus       149 ~~~~~~~~~r~~~~~iggf~~~~~--~~eD~~l~~rl~~~g~~~~~~~~~~~  198 (202)
T cd04184         149 YIGHLLVYRRSLVRQVGGFREGFE--GAQDYDLVLRVSEHTDRIAHIPRVLY  198 (202)
T ss_pred             CccceEeEEHHHHHHhCCCCcCcc--cchhHHHHHHHHhccceEEEccHhhh
Confidence            346677899999999999999875  67999999999999999999997433

The rfbC gene encodes a predicted protein of 1,276 amino acids, which is required for O-antigen biosynthesis in Myxococcus xanthus. It is a subfamily of Glycosyltransferase Family GT2, which includes diverse families of glycosyl transferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds.

>cd02522 GT_2_like_a GT_2_like_a represents a glycosyltransferase family-2 subfamily with unknown function

Probab=98.11  E-value=7.1e-06  Score=64.76  Aligned_cols=48  Identities=23%  Similarity=0.275  Sum_probs=41.0

Q ss_pred             cceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEe
Q psy6373           9 GGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGH   60 (199)
Q Consensus         9 GGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgH   60 (199)
                      +++++++|+.|.++|+||+.+   .+||++|++|++.+|..+.+ |-..+.+
T Consensus       138 ~~~~~~r~~~~~~~G~fd~~~---~~ED~d~~~r~~~~G~~~~~-~~~~~~~  185 (221)
T cd02522         138 DQGLFIRRELFEELGGFPELP---LMEDVELVRRLRRRGRPALL-PSPVTTS  185 (221)
T ss_pred             CceEEEEHHHHHHhCCCCccc---cccHHHHHHHHHhCCCEEEc-Cceeeec
Confidence            457899999999999999998   57999999999999999877 6544443

Glycosyltransferase family 2 (GT-2) subfamily of unknown function. GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd02520 Glucosylceramide_synthase Glucosylceramide synthase catalyzes the first glycosylation step of glycosphingolipid synthesis

Probab=98.01  E-value=2.8e-06  Score=67.57  Aligned_cols=55  Identities=13%  Similarity=0.312  Sum_probs=46.9

Q ss_pred             eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeee
Q psy6373           7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF   62 (199)
Q Consensus         7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHif   62 (199)
                      ..|++++++|+.|.++||||. +....+||++|++|+...|.++.++|+..+.|..
T Consensus       124 ~~g~~~~~r~~~~~~~ggf~~-~~~~~~eD~~l~~rl~~~G~~i~~~~~~~~~~~~  178 (196)
T cd02520         124 AFGKSMALRREVLDAIGGFEA-FADYLAEDYFLGKLIWRLGYRVVLSPYVVMQPLG  178 (196)
T ss_pred             ccCceeeeEHHHHHhccChHH-HhHHHHHHHHHHHHHHHcCCeEEEcchheeccCC
Confidence            568899999999999999975 4334479999999999999999999998766544

UDP-glucose:N-acylsphingosine D-glucosyltransferase (glucosylceramide synthase or ceramide glucosyltransferase) catalyzes the first glycosylation step of glycosphingolipid synthesis. Its product, glucosylceramide, serves as the core of more than 300 glycosphingolipids (GSL). GSLs are a group of membrane components that have the lipid portion embedded in the outer plasma membrane leaflet and the sugar chains extended to the outer environment. Several lines of evidence suggest the importance of GSLs in various cellular processes such as differentiation, adhesion, proliferation, and cell-cell recognition. In pathogenic fungus Cryptococcus neoformans, glucosylceramide serves as an antigen that elicits an antibody response in patients and it is essential for fungal growth in host extracellular environment.

>cd06421 CESA_CelA_like CESA_CelA_like are involved in the elongation of the glucan chain of cellulose

Probab=98.01  E-value=7.5e-06  Score=64.96  Aligned_cols=55  Identities=18%  Similarity=0.248  Sum_probs=48.6

Q ss_pred             CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV   61 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi   61 (199)
                      ++...|++++++|+.|.++|+||+.+   .+||++|++|++..|.++.++|...+.|.
T Consensus       157 ~~~~~g~~~~~r~~~~~~ig~~~~~~---~~eD~~l~~r~~~~g~~i~~~~~~~~~~~  211 (234)
T cd06421         157 AAFCCGSGAVVRREALDEIGGFPTDS---VTEDLATSLRLHAKGWRSVYVPEPLAAGL  211 (234)
T ss_pred             CceecCceeeEeHHHHHHhCCCCccc---eeccHHHHHHHHHcCceEEEecCcccccc
Confidence            55667899999999999999999654   37999999999999999999999888664

Family of proteins related to Agrobacterium tumefaciens CelA and Gluconacetobacter xylinus BscA. These proteins are involved in the elongation of the glucan chain of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues. They are putative catalytic subunit of cellulose synthase, which is a glycosyltransferase using UDP-glucose as the substrate. The catalytic subunit is an integral membrane protein with 6 transmembrane segments and it is postulated that the protein is anchored in the membrane at the N-terminal end.

>cd06437 CESA_CaSu_A2 Cellulose synthase catalytic subunit A2 (CESA2) is a catalytic subunit or a catalytic subunit substitute of the cellulose synthase complex

Probab=97.97  E-value=6e-06  Score=66.79  Aligned_cols=55  Identities=16%  Similarity=0.155  Sum_probs=47.6

Q ss_pred             eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeecc
Q psy6373           7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRK   64 (199)
Q Consensus         7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~   64 (199)
                      +.|+..+++|+.|.++||||+.+   .+||++|++|+++.|.++.++|++.|.|..+.
T Consensus       162 ~~g~~~~~rr~~~~~vgg~~~~~---~~ED~~l~~rl~~~G~~~~~~~~~~v~~~~~~  216 (232)
T cd06437         162 FNGTAGVWRKECIEDAGGWNHDT---LTEDLDLSYRAQLKGWKFVYLDDVVVPAELPA  216 (232)
T ss_pred             eccchhhhhHHHHHHhCCCCCCc---chhhHHHHHHHHHCCCeEEEeccceeeeeCCc
Confidence            35666678999999999999864   26999999999999999999999999877543

Cellulose synthase (CESA) catalyzes the polymerization reaction of cellulose using UDP-glucose as the substrate. Cellulose is an aggregate of unbranched polymers of beta-1,4-linked glucose residues, which is an abundant polysaccharide produced by plants and in varying degrees by several other organisms including algae, bacteria, fungi, and even some animals. Genomes from higher plants harbor multiple CESA genes. There are ten in Arabidopsis. At least three different CESA proteins are required to form a functional complex. In Arabidopsis, CESA1, 3 and 6 and CESA4, 7 and 8, are required for cellulose biosynthesis during primary and secondary cell wall formation. CESA2 is very closely related to CESA6 and is viewed as a prime substitute for CESA6. They functionally compensate each other. The cesa2 and cesa6 double mutant plants we

>PRK11204 N-glycosyltransferase; Provisional

Probab=97.86  E-value=2.2e-05  Score=69.89  Aligned_cols=57  Identities=14%  Similarity=0.269  Sum_probs=51.0

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeecc
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRK   64 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~   64 (199)
                      ..++|++++++|+.|.++|+||+.+.   +||+|+++|+..+|.++.++|.+.+.|..+.
T Consensus       207 ~~~~G~~~~~rr~~l~~vgg~~~~~~---~ED~~l~~rl~~~G~~i~~~p~~~~~~~~p~  263 (420)
T PRK11204        207 FTVSGVITAFRKSALHEVGYWSTDMI---TEDIDISWKLQLRGWDIRYEPRALCWILMPE  263 (420)
T ss_pred             eEecceeeeeeHHHHHHhCCCCCCcc---cchHHHHHHHHHcCCeEEeccccEEEeECcc
Confidence            35679999999999999999999874   6999999999999999999999999887543

>cd04192 GT_2_like_e Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=97.84  E-value=2.7e-05  Score=61.25  Aligned_cols=53  Identities=13%  Similarity=0.160  Sum_probs=44.3

Q ss_pred             eeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCC-cEEEe--ecceEE
Q psy6373           6 MIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGG-SLEIV--PCSRVG   59 (199)
Q Consensus         6 ~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG-~i~iv--PCSRVg   59 (199)
                      ...|++++++|+.|.++||||+.+..+ +||.++.+|+...|+ ++.++  |++.+.
T Consensus       154 ~~~g~~~~~rr~~~~~~ggf~~~~~~~-~eD~~~~~~~~~~g~~~~~~~~~~~~~~~  209 (229)
T cd04192         154 MCNGANMAYRKEAFFEVGGFEGNDHIA-SGDDELLLAKVASKYPKVAYLKNPEALVT  209 (229)
T ss_pred             ccccceEEEEHHHHHHhcCCccccccc-cCCHHHHHHHHHhCCCCEEEeeCcchhee
Confidence            345888999999999999999887655 799999999999999 88777  455553

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06433 GT_2_WfgS_like WfgS and WfeV are involved in O-antigen biosynthesis

Probab=97.82  E-value=1.8e-05  Score=60.26  Aligned_cols=57  Identities=18%  Similarity=0.261  Sum_probs=48.0

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR   63 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR   63 (199)
                      ..+.+++++++|+.|.++|+||+.+. + ++|.||++|++..|+.+.++|...+.|..+
T Consensus       140 ~~~~~~~~~~~~~~~~~~~~f~~~~~-~-~~D~~~~~r~~~~g~~~~~~~~~~~~~~~~  196 (202)
T cd06433         140 MPICHQATFFRRSLFEKYGGFDESYR-I-AADYDLLLRLLLAGKIFKYLPEVLAAFRLG  196 (202)
T ss_pred             CcccCcceEEEHHHHHHhCCCchhhC-c-hhhHHHHHHHHHcCCceEecchhhhhheec
Confidence            34556678899999999999999986 3 479999999999999999999877766544

Escherichia coli WfgS and Shigella dysenteriae WfeV are glycosyltransferase 2 family enzymes involved in O-antigen biosynthesis. GT-2 enzymes have GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd06913 beta3GnTL1_like Beta 1, 3-N-acetylglucosaminyltransferase is essential for the formation of poly-N-acetyllactosamine

Probab=97.73  E-value=4.2e-05  Score=61.33  Aligned_cols=53  Identities=17%  Similarity=0.219  Sum_probs=45.5

Q ss_pred             ceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373          10 GLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR   63 (199)
Q Consensus        10 GlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR   63 (199)
                      ..++++|+.|.++|+||+.+..+ +||.+|.+|+...|+++..+|..-+.+..+
T Consensus       159 ~~~~~rr~~~~~~g~f~~~~~~~-~eD~~l~~r~~~~g~~i~~~~~~~~~yr~~  211 (219)
T cd06913         159 PTWFCSREWFSHVGPFDEGGKGV-PEDLLFFYEHLRKGGGVYRVDRCLLLYRYH  211 (219)
T ss_pred             ccceeehhHHhhcCCccchhccc-hhHHHHHHHHHHcCCceEEEcceeeeeeec
Confidence            34679999999999999987666 599999999999999999999877765544

This family includes human Beta3GnTL1 and related eukaryotic proteins. Human Beta3GnTL1 is a putative beta-1,3-N-acetylglucosaminyltransferase. Beta3GnTL1 is expressed at various levels in most of tissues examined. Beta 1, 3-N-acetylglucosaminyltransferase has been found to be essential for the formation of poly-N-acetyllactosamine. Poly-N-acetyllactosamine is a unique carbohydrate composed of N-acetyllactosamine repeats. It is often an important part of cell-type-specific oligosaccharide structures and some functional oligosaccharides. It has been shown that the structure and biosynthesis of poly-N-acetyllactosamine display a dramatic change during development and oncogenesis. Several members of beta-1, 3-N-acetylglucosaminyltransferase have been identified.

>cd06427 CESA_like_2 CESA_like_2 is a member of the cellulose synthase superfamily

Probab=97.65  E-value=2.4e-05  Score=64.18  Aligned_cols=49  Identities=14%  Similarity=0.270  Sum_probs=42.4

Q ss_pred             eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373           7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV   58 (199)
Q Consensus         7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV   58 (199)
                      +.|++++++|++|.++||||+.  .+ +||+||++|++..|.++.++|...+
T Consensus       161 ~~g~~~~~rr~~~~~vgg~~~~--~~-~eD~~l~~rl~~~G~r~~~~~~~~~  209 (241)
T cd06427         161 LGGTSNHFRTDVLRELGGWDPF--NV-TEDADLGLRLARAGYRTGVLNSTTL  209 (241)
T ss_pred             cCCchHHhhHHHHHHcCCCCcc--cc-hhhHHHHHHHHHCCceEEEeccccc
Confidence            3577789999999999999984  34 6999999999999999999987554

The cellulose synthase (CESA) superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members include cellulose synthase catalytic subunit, chitin synthase, Glucan Biosynthesis protein and other families of CESA-like proteins. Cellulose synthase catalyzes the polymerization reaction of cellulose, an aggregate of unbranched polymers of beta-1,4-linked glucose residues in plants, most algae, some bacteria and fungi, and even some animals. In bacteria, algae and lower eukaryotes, there is a second unrelated type of cellulose synthase (Type II), which produces acylated cellulose, a derivative of cellulose. Chitin synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of beta-(1,4)-linked GlcNAc residues and Glucan Biosynthesis prot

>PRK14583 hmsR N-glycosyltransferase; Provisional

Probab=97.59  E-value=0.00012  Score=67.03  Aligned_cols=56  Identities=16%  Similarity=0.209  Sum_probs=50.0

Q ss_pred             CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeee
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF   62 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHif   62 (199)
                      ..+.+|++.+++|+.+.++||||+.+.   .||+|||+|+...|.++.++|.+.+.+.-
T Consensus       227 ~~~~sG~~~~~rr~al~~vGg~~~~~i---~ED~dl~~rl~~~G~~i~~~p~a~~~~~~  282 (444)
T PRK14583        227 VFTVSGVVAAFRRRALADVGYWSPDMI---TEDIDISWKLQLKHWSVFFEPRGLCWILM  282 (444)
T ss_pred             ceEecCceeEEEHHHHHHcCCCCCCcc---cccHHHHHHHHHcCCeEEEeeccEEeeeC
Confidence            345679999999999999999999874   69999999999999999999999887753

>TIGR03469 HonB hopene-associated glycosyltransferase HpnB

Probab=97.37  E-value=0.00019  Score=64.51  Aligned_cols=53  Identities=21%  Similarity=0.302  Sum_probs=46.3

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV   58 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV   58 (199)
                      ....|+|++++|+.|+++||||+-...+ .||++|+.|+...|+++.+.+...+
T Consensus       207 ~~~~G~~~lirr~~~~~vGGf~~~~~~~-~ED~~L~~r~~~~G~~v~~~~~~~~  259 (384)
T TIGR03469       207 AAAAGGCILIRREALERIGGIAAIRGAL-IDDCTLAAAVKRSGGRIWLGLAART  259 (384)
T ss_pred             eeecceEEEEEHHHHHHcCCHHHHhhCc-ccHHHHHHHHHHcCCcEEEEecCce
Confidence            3467999999999999999999876666 6999999999999999999876544

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The genes of this family are often found in the same genetic locus with squalene-hopene cyclase genes, and are never associated with genes for the metabolism of phytoene. Indeed, the members of this family appear to never be found in a genome lacking squalene-hopene cyclase (SHC), although not all genomes encoding SHC have this glycosyl transferase. In the organism Zymomonas mobilis the linkage of this gene to hopanoid biosynthesis has been noted and the gene named HpnB. Hopanoids are known to feature polar glycosyl head groups in many organisms.

>TIGR03472 HpnI hopanoid biosynthesis associated glycosyl transferase protein HpnI

Probab=97.35  E-value=9.9e-05  Score=65.88  Aligned_cols=54  Identities=15%  Similarity=0.158  Sum_probs=45.9

Q ss_pred             eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373           7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV   61 (199)
Q Consensus         7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi   61 (199)
                      ..|++++++|+.|.++||||+-.... +||++|+.|++.+|.++.+.|+..+.+.
T Consensus       200 ~~G~~~a~RR~~l~~iGGf~~~~~~~-~ED~~l~~~i~~~G~~v~~~~~~v~~~~  253 (373)
T TIGR03472       200 CFGATMALRRATLEAIGGLAALAHHL-ADDYWLGELVRALGLRVVLAPVVVDTDV  253 (373)
T ss_pred             ccChhhheeHHHHHHcCChHHhcccc-hHHHHHHHHHHHcCCeEEecchhhhcCC
Confidence            45888999999999999999766555 6999999999999999999998644433

This family of genes include a glycosyl transferase, group 2 domain (pfam00535) which are responsible, generally for the transfer of nucleotide-diphosphate sugars to substrates such as polysaccharides and lipids. The member of this clade from Acidithiobacillus ferrooxidans ATCC 23270 (AFE_0974) is found in the same locus as squalene-hopene cyclase (SHC, TIGR01507) and other genes associated with the biosynthesis of hopanoid natural products. Similarly, in Ralstonia eutropha JMP134 (Reut_B4902) this gene is adjacent to HpnAB, IspH and HpnH (TIGR03470), although SHC itself is elsewhere in the genome. Notably, this gene (here named HpnI) and three others form a conserved set (HpnIJKL) which occur in a subset of all genomes containing the SHC enzyme. This relationship was discerned using the method of partial phylogenetic profiling. This group includes Zymomonas mobilis, the organism where the initial hopano

>cd06442 DPM1_like DPM1_like represents putative enzymes similar to eukaryotic DPM1

Probab=97.30  E-value=0.00021  Score=56.55  Aligned_cols=56  Identities=21%  Similarity=0.172  Sum_probs=44.0

Q ss_pred             CceeccceEEEehhHHhHhc-CCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeee
Q psy6373           4 TPMIAGGLFSIDRKYFEKLG-KYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF   62 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLG-GfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHif   62 (199)
                      .+...|++++++|+.|.++| .+++..  + ..++||++|+|.+|.++..+|...+.|..
T Consensus       148 ~~~~~~~~~~~~r~~~~~ig~~~~~~~--~-~~~~~l~~~~~~~g~~i~~~p~~~~~~~~  204 (224)
T cd06442         148 VSDPTSGFRAYRREVLEKLIDSLVSKG--Y-KFQLELLVRARRLGYRIVEVPITFVDREH  204 (224)
T ss_pred             CCCCCCccchhhHHHHHHHhhhccCCC--c-EEeHHHHHHHHHcCCeEEEeCeEEeccCC
Confidence            34456888999999999998 443321  1 34689999999999999999998887664

Proteins similar to eukaryotic DPM1, including enzymes from bacteria and archaea; DPM1 is the catalytic subunit of eukaryotic dolichol-phosphate mannose (DPM) synthase. DPM synthase is required for synthesis of the glycosylphosphatidylinositol (GPI) anchor, N-glycan precursor, protein O-mannose, and C-mannose. In higher eukaryotes,the enzyme has three subunits, DPM1, DPM2 and DPM3. DPM is synthesized from dolichol phosphate and GDP-Man on the cytosolic surface of the ER membrane by DPM synthase and then is flipped onto the luminal side and used as a donor substrate. In lower eukaryotes, such as Saccharomyces cerevisiae and Trypanosoma brucei, DPM synthase consists of a single component (Dpm1p and TbDpm1, respectively) that possesses one predicted transmembrane region near the C terminus for anchoring to the ER membrane. In contrast, the Dpm1 homologues of higher eukaryotes, namely fission yeast, fungi,

>KOG3588|consensus

Probab=97.15  E-value=0.00031  Score=66.67  Aligned_cols=56  Identities=23%  Similarity=0.471  Sum_probs=50.9

Q ss_pred             ceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccC
Q psy6373          10 GLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKR   65 (199)
Q Consensus        10 GlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~   65 (199)
                      |+-++-|..|..+||||....+|||||++|=-|.-..|-.+.=+|..-+.|+++..
T Consensus       386 Gmtc~yrsd~~~vgGFD~~I~GWG~EDV~Ly~K~v~~~l~viR~p~pGl~H~~H~~  441 (494)
T KOG3588|consen  386 GMTCQYRSDFLTVGGFDMEIKGWGGEDVDLYRKYVHSGLKVIRTPEPGLFHLWHPK  441 (494)
T ss_pred             ceeEEeeccceeecCcceeeeccCcchHHHHHHHHhcCcEEEecCCCceEEeeccc
Confidence            46678899999999999999999999999988899999888889999999999865

>TIGR03111 glyc2_xrt_Gpos1 putative glycosyltransferase TIGR03111

Probab=97.07  E-value=0.00039  Score=63.73  Aligned_cols=55  Identities=15%  Similarity=0.221  Sum_probs=48.0

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhh-cCCcEEEeecceEEeee
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQ-CGGSLEIVPCSRVGHVF   62 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWl-CGG~i~ivPCSRVgHif   62 (199)
                      .+++|++++++|+.+.++||||+...   +||.||++|++. .|+++.+.|.+.+.|.-
T Consensus       213 ~~~sGa~~~~Rr~~l~~vggf~~~~i---~ED~~l~~rl~~~~g~kv~~~~~a~~~~~~  268 (439)
T TIGR03111       213 FTLSGAFSAFRRETILKTQLYNSETV---GEDTDMTFQIRELLDGKVYLCENAIFYVDP  268 (439)
T ss_pred             EEEccHHHhhhHHHHHHhCCCCCCCc---CccHHHHHHHHHhcCCeEEECCCCEEEEEC
Confidence            34678889999999999999998763   799999999985 69999999999998754

Members of this protein family probable glycosyltransferases of family 2, whose genes are near those for Gram-positive proteins (TIGR03110) related to the proposed exosortase (TIGR02602).

>KOG3916|consensus

Probab=97.04  E-value=0.00075  Score=63.01  Aligned_cols=87  Identities=23%  Similarity=0.327  Sum_probs=64.0

Q ss_pred             eeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcE-----EEeecceEEeeeccCCCCCCCCCCchhhhh
Q psy6373           6 MIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSL-----EIVPCSRVGHVFRKRHPYTFPGGSGNVFAR   80 (199)
Q Consensus         6 ~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i-----~ivPCSRVgHifR~~~PY~~p~g~~~~i~R   80 (199)
                      .+-||+-|++++-|.+|-||-..|.+|||||=||.-|+-+.|-.|     .+-.+..+-|.-|...|  +|     ....
T Consensus       259 ~~FGGVsalt~~qf~kINGFsN~fWGWGGEDDDl~nRv~~ag~~IsRp~~~igrYkMikH~~k~n~~--n~-----~Ry~  331 (372)
T KOG3916|consen  259 EYFGGVSALTKEQFRKINGFSNAFWGWGGEDDDLWNRVQLAGMKISRPPPEIGRYKMIKHHDKGNEP--NP-----GRYK  331 (372)
T ss_pred             hhhCchhhccHHHHHHhcCCCchhcccCCcchHHHHHHHhcCceeecCCCccceeEEeecccccCCC--Ch-----HHHH
Confidence            356999999999999999999999999999999999999999876     45667777787443332  11     1233


Q ss_pred             hHHHHHHhhhcc-ccceeec
Q psy6373          81 NTRRAAEVWMDN-YKHYYYA   99 (199)
Q Consensus        81 N~lRvAEVWmDE-YK~~fY~   99 (199)
                      +.....++|--| ..+.-|.
T Consensus       332 lL~~tk~r~~~DGLnsl~Y~  351 (372)
T KOG3916|consen  332 LLRNTKERQTQDGLNSLKYQ  351 (372)
T ss_pred             HHHhhhhhhhhccccceeee
Confidence            444455667544 5555553

>PF13712 Glyco_tranf_2_5: Glycosyltransferase like family; PDB: 2QGI_A 2NXV_B

Probab=96.78  E-value=0.0016  Score=55.24  Aligned_cols=73  Identities=8%  Similarity=0.160  Sum_probs=43.8

Q ss_pred             CceeccceEEEehhHHhHhcCCCcc-CccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhhH
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMA-MSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNT   82 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeG-m~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~   82 (199)
                      +=++-|++||+.|+.|    +||+. |..|..-|+++|+++...|.++.+.| ..+.|.....+        .....++.
T Consensus       144 V~avDg~ll~~~~dv~----~fde~~~~gfH~Ydvd~cl~~~~~G~~v~~~~-~~~~H~s~g~~--------~~~~~~~~  210 (217)
T PF13712_consen  144 VQAVDGLLLATQKDVP----RFDEDLFTGFHFYDVDQCLEARRAGYRVVVPP-PWCIHFSGGSF--------DENYYEAR  210 (217)
T ss_dssp             EEEE-TTEEEEETTB---------SS--SSSSHHHHHHHHHHHTT-EEEE------EE-S------------SHHHHHHH
T ss_pred             EEEecceEEEEEcccC----CCCccccCCcchHHHHHHHHHHHhCCEEEecC-ceEEEcCCCCc--------cHhHHHHH
Confidence            4466799999999999    89999 89999999999999999998885544 66777755431        13456777


Q ss_pred             HHHHHhh
Q psy6373          83 RRAAEVW   89 (199)
Q Consensus        83 lRvAEVW   89 (199)
                      .++.+.|
T Consensus       211 ~~~~~ky  217 (217)
T PF13712_consen  211 KKFLRKY  217 (217)
T ss_dssp             HHHHHHH
T ss_pred             HHHHhhC
Confidence            7777666

>PF13506 Glyco_transf_21: Glycosyl transferase family 21

Probab=96.46  E-value=0.0021  Score=52.55  Aligned_cols=55  Identities=18%  Similarity=0.380  Sum_probs=47.2

Q ss_pred             CCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373           3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV   58 (199)
Q Consensus         3 rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV   58 (199)
                      ..+...|++++++|+.++++|||+.==... +||..|+-+++..|.++.+.|...+
T Consensus        97 ~~~~~~G~~m~~rr~~L~~~GG~~~l~~~l-adD~~l~~~~~~~G~~v~~~~~~v~  151 (175)
T PF13506_consen   97 GAPFAWGGSMAFRREALEEIGGFEALADYL-ADDYALGRRLRARGYRVVLSPYPVV  151 (175)
T ss_pred             CCCceecceeeeEHHHHHHcccHHHHhhhh-hHHHHHHHHHHHCCCeEEEcchhee
Confidence            467889999999999999999998633333 8999999999999999999996544

>COG1215 Glycosyltransferases, probably involved in cell wall biogenesis [Cell envelope biogenesis, outer membrane]

Probab=96.33  E-value=0.0054  Score=53.99  Aligned_cols=52  Identities=19%  Similarity=0.305  Sum_probs=47.1

Q ss_pred             CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV   58 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV   58 (199)
                      +....|++.+++|+.+.++|++++...   +||.+|++|+...|.++.++|.+.+
T Consensus       211 ~~~~~G~~~~~rr~aL~~~g~~~~~~i---~ED~~lt~~l~~~G~~~~~~~~~~~  262 (439)
T COG1215         211 ISFLSGSSSAFRRSALEEVGGWLEDTI---TEDADLTLRLHLRGYRVVYVPEAIV  262 (439)
T ss_pred             eEEEcceeeeEEHHHHHHhCCCCCCce---eccHHHHHHHHHCCCeEEEeecceE
Confidence            456789999999999999999998775   7999999999999999999999833

>PLN02726 dolichyl-phosphate beta-D-mannosyltransferase

Probab=96.24  E-value=0.0053  Score=50.69  Aligned_cols=58  Identities=22%  Similarity=0.228  Sum_probs=47.0

Q ss_pred             CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR   63 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR   63 (199)
                      .+-..||+.+++|+.|..++.++... .| ..++||.+|+..+|.++..+|.+.+.|..-
T Consensus       163 ~~d~~g~~~~~rr~~~~~i~~~~~~~-~~-~~~~el~~~~~~~g~~i~~vp~~~~~r~~g  220 (243)
T PLN02726        163 VSDLTGSFRLYKRSALEDLVSSVVSK-GY-VFQMEIIVRASRKGYRIEEVPITFVDRVYG  220 (243)
T ss_pred             CCcCCCcccceeHHHHHHHHhhccCC-Cc-EEehHHHHHHHHcCCcEEEeCcEEeCCCCC
Confidence            34466888999999999998765432 34 357999999999999999999999887754

>PRK11498 bcsA cellulose synthase catalytic subunit; Provisional

Probab=96.14  E-value=0.0077  Score=61.31  Aligned_cols=52  Identities=17%  Similarity=0.267  Sum_probs=45.1

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEE
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVG   59 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVg   59 (199)
                      +...|++++++|+.|.++||||+..  . .||+|+++|+...|.++.++|...+.
T Consensus       416 ~~~~Gs~aviRReaLeeVGGfd~~t--i-tED~dlslRL~~~Gyrv~yl~~~~a~  467 (852)
T PRK11498        416 TFFCGSCAVIRRKPLDEIGGIAVET--V-TEDAHTSLRLHRRGYTSAYMRIPQAA  467 (852)
T ss_pred             cccccceeeeEHHHHHHhcCCCCCc--c-CccHHHHHHHHHcCCEEEEEecccee
Confidence            4567999999999999999999875  3 69999999999999999998765544

>TIGR03030 CelA cellulose synthase catalytic subunit (UDP-forming)

Probab=96.12  E-value=0.0072  Score=59.42  Aligned_cols=54  Identities=11%  Similarity=0.215  Sum_probs=47.2

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV   61 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi   61 (199)
                      +...|.+.+++|+.|.++||||++..   .||+++++|+...|.++.++|...+.+.
T Consensus       305 ~~~~Gs~~~iRR~al~~iGGf~~~~v---tED~~l~~rL~~~G~~~~y~~~~~~~g~  358 (713)
T TIGR03030       305 AFFCGSAAVLRREALDEIGGIAGETV---TEDAETALKLHRRGWNSAYLDRPLIAGL  358 (713)
T ss_pred             eeecCceeEEEHHHHHHcCCCCCCCc---CcHHHHHHHHHHcCCeEEEecccccccc
Confidence            44568889999999999999998653   7999999999999999999998877654

Cellulose synthase catalyzes the beta-1,4 polymerization of glucose residues in the formation of cellulose. In bacteria, the substrate is UDP-glucose. The synthase consists of two subunits (or domains in the frequent cases where it is encoded as a single polypeptide), the catalytic domain modelled here and the regulatory domain (pfam03170). The regulatory domain binds the allosteric activator cyclic di-GMP. The protein is membrane-associated and probably assembles into multimers such that the individual cellulose strands can self-assemble into multi-strand fibrils.

>cd06439 CESA_like_1 CESA_like_1 is a member of the cellulose synthase (CESA) superfamily

Probab=96.06  E-value=0.0059  Score=49.57  Aligned_cols=72  Identities=15%  Similarity=0.129  Sum_probs=53.8

Q ss_pred             CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhhHH
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTR   83 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~l   83 (199)
                      .....|++++++|+.|.   +|+..   ...||++|++|+...|.++.++|++.+.|......         ....+..+
T Consensus       178 ~~~~~g~~~~~rr~~~~---~~~~~---~~~eD~~l~~~~~~~G~~~~~~~~~~~~~~~~~~~---------~~~~~~~~  242 (251)
T cd06439         178 TVGANGAIYAIRRELFR---PLPAD---TINDDFVLPLRIARQGYRVVYEPDAVAYEEVAEDG---------SEEFRRRV  242 (251)
T ss_pred             eeeecchHHHhHHHHhc---CCCcc---cchhHHHHHHHHHHcCCeEEeccccEEEEeCcccH---------HHHHHHHH
Confidence            45567888899999988   56543   34699999999999999999999999987764322         23456666


Q ss_pred             HHHHhhh
Q psy6373          84 RAAEVWM   90 (199)
Q Consensus        84 RvAEVWm   90 (199)
                      |.+.-+|
T Consensus       243 r~~~g~~  249 (251)
T cd06439         243 RIAAGNL  249 (251)
T ss_pred             HHHhccc
Confidence            7665544

This is a subfamily of cellulose synthase (CESA) superfamily. CESA superfamily includes a wide variety of glycosyltransferase family 2 enzymes that share the common characteristic of catalyzing the elongation of polysaccharide chains. The members of the superfamily include cellulose synthase catalytic subunit, chitin synthase, glucan biosynthesis protein and other families of CESA-like proteins.

>cd04190 Chitin_synth_C C-terminal domain of Chitin Synthase catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin

Probab=95.79  E-value=0.011  Score=49.37  Aligned_cols=58  Identities=10%  Similarity=0.006  Sum_probs=46.0

Q ss_pred             CceeccceEEEehhHHhHhcCCCccCc-----------------cCCcccchhhhhhhhcCCcEEE--eecceEEee
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMAMS-----------------VWGGENLEISFRVWQCGGSLEI--VPCSRVGHV   61 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeGm~-----------------iwGGEdiELS~RvWlCGG~i~i--vPCSRVgHi   61 (199)
                      +++++|+++++++..+.++|++...+.                 ..=+||.+|++|+...|.++.+  +|.+.|...
T Consensus       146 ~~~~~G~~~~~R~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ED~~l~~~l~~~G~~~~~~~~~~a~~~~~  222 (244)
T cd04190         146 VTCLPGCFSMYRIEALKGDNGGKGPLLDYAYLTNTVDSLHKKNNLDLGEDRILCTLLLKAGPKRKYLYVPGAVAETD  222 (244)
T ss_pred             eEECCCceEEEEehhhcCCccccccchhhccccCcccchHHHHHHhHhcccceeHHHhccCCccEEEEecccEEEEE
Confidence            567889999999999999987654211                 1127999999999999999999  888887544

Chitin synthase, also called UDP-N-acetyl-D-glucosamine:chitin 4-beta-N-acetylglucosaminyltransferase, catalyzes the incorporation of GlcNAc from substrate UDP-GlcNAc into chitin, which is a linear homopolymer of GlcNAc residues formed by covalent beta-1,4 linkages. Chitin is an important component of the cell wall of fungi and bacteria and it is synthesized on the cytoplasmic surface of the cell membrane by membrane bound chitin synthases. Studies with fungi have revealed that most of them contain more than one chitin synthase gene. At least five subclasses of chitin synthases have been identified.

>cd06434 GT2_HAS Hyaluronan synthases catalyze polymerization of hyaluronan

Probab=95.74  E-value=0.0039  Score=49.81  Aligned_cols=57  Identities=11%  Similarity=0.061  Sum_probs=46.8

Q ss_pred             CceeccceEEEehhHHhHhcCCCccC--------ccCCcccchhhhhhhhcCCcEEEeecceEEee
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMAM--------SVWGGENLEISFRVWQCGGSLEIVPCSRVGHV   61 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeGm--------~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHi   61 (199)
                      ++++.|++++++|+.+.+++ |+.+|        ..-.+||.+|+.|+...|.++.+.|+..+.|.
T Consensus       149 ~~~~~G~~~~~rr~~l~~~~-~~~~~~~~~~~~~~~~~~eD~~l~~~~~~~g~~~~~~~~~~~~~~  213 (235)
T cd06434         149 VPCLSGRTAAYRTEILKDFL-FLEEFTNETFMGRRLNAGDDRFLTRYVLSHGYKTVYQYTSEAYTE  213 (235)
T ss_pred             EEEccCcHHHHHHHHHhhhh-hHHHhhhhhhcCCCCCcCchHHHHHHHHHCCCeEEEecCCeEEEE
Confidence            45677888899999998874 44444        23357999999999999999999999999986

Hyaluronan synthases (HASs) are bi-functional glycosyltransferases that catalyze polymerization of hyaluronan. HASs transfer both GlcUA and GlcNAc in beta-(1,3) and beta-(1,4) linkages, respectively to the hyaluronan chain using UDP-GlcNAc and UDP-GlcUA as substrates. HA is made as a free glycan, not attached to a protein or lipid. HASs do not need a primer for HA synthesis; they initiate HA biosynthesis de novo with only UDP-GlcNAc, UDP-GlcUA, and Mg2+. Hyaluronan (HA) is a linear heteropolysaccharide composed of (1-3)-linked beta-D-GlcUA-beta-D-GlcNAc disaccharide repeats. It can be found in vertebrates and a few microbes and is typically on the cell surface or in the extracellular space, but is also found inside mammalian cells. Hyaluronan has several physiochemical and biological functions such as space filling, lubrication, and providing a hydrated matrix through which cells can migrate.

>COG4092 Predicted glycosyltransferase involved in capsule biosynthesis [Cell envelope biogenesis, outer membrane]

Probab=95.72  E-value=0.0071  Score=55.68  Aligned_cols=51  Identities=25%  Similarity=0.468  Sum_probs=42.4

Q ss_pred             cceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeee
Q psy6373           9 GGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF   62 (199)
Q Consensus         9 GGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHif   62 (199)
                      .++|.|+|..|..+||||+.|.++|.||+||=-|+=+.   |...|----.|.|
T Consensus       179 T~~~liN~~~F~~tgGydE~F~GhG~EDfe~~~R~~l~---~~~~p~~~~nh~y  229 (346)
T COG4092         179 TNIFLINRRMFSLTGGYDERFRGHGSEDFEFLTRLGLY---IKNLPMLTKNHLY  229 (346)
T ss_pred             cceEEEehhHHHHhcCCccccccCCchhHHHHHHHHHH---Hhccccccccccc
Confidence            46899999999999999999999999999999887554   4555655556666

>PRK14716 bacteriophage N4 adsorption protein B; Provisional

Probab=95.68  E-value=0.012  Score=56.36  Aligned_cols=49  Identities=24%  Similarity=0.312  Sum_probs=42.5

Q ss_pred             eccceEEEehhHHhHh-----cC-CCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373           7 IAGGLFSIDRKYFEKL-----GK-YDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV   58 (199)
Q Consensus         7 maGGlFAI~R~~F~eL-----GG-fDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV   58 (199)
                      ..|..++++|+.+.+|     |+ ||+...   .||+|||+|+++.|.++.++|.+..
T Consensus       232 ~~Gtg~afRR~aLe~l~~~~GG~~fd~~sL---TED~dLglRL~~~G~rv~y~p~ai~  286 (504)
T PRK14716        232 SAGVGTAFSRRALERLAAERGGQPFDSDSL---TEDYDIGLRLKRAGFRQIFVRVRAD  286 (504)
T ss_pred             cCCeeEEeEHHHHHHHHhhcCCCCCCCCCc---chHHHHHHHHHHCCCEEEEeccccc
Confidence            4588899999999999     43 998854   7999999999999999999998743

>cd04196 GT_2_like_d Subfamily of Glycosyltransferase Family GT2 of unknown function

Probab=95.09  E-value=0.018  Score=44.71  Aligned_cols=52  Identities=12%  Similarity=0.073  Sum_probs=44.2

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEE
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVG   59 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVg   59 (199)
                      +.+.|++++++|+.|.++|+|++.+ .| .+|.++.+++.. ||.+.++|...+.
T Consensus       150 ~~~~~~~~~~r~~~~~~~~~~~~~~-~~-~~D~~~~~~~~~-~~~~~~~~~~~~~  201 (214)
T cd04196         150 NVVTGCTMAFNRELLELALPFPDAD-VI-MHDWWLALLASA-FGKVVFLDEPLIL  201 (214)
T ss_pred             CccCCceeeEEHHHHHhhccccccc-cc-cchHHHHHHHHH-cCceEEcchhHHH
Confidence            4567888999999999999999887 34 689999999888 8899999987763

GT-2 includes diverse families of glycosyltransferases with a common GT-A type structural fold, which has two tightly associated beta/alpha/beta domains that tend to form a continuous central sheet of at least eight beta-strands. These are enzymes that catalyze the transfer of sugar moieties from activated donor molecules to specific acceptor molecules, forming glycosidic bonds. Glycosyltransferases have been classified into more than 90 distinct sequence based families.

>cd04191 Glucan_BSP_ModH Glucan_BSP_ModH catalyzes the elongation of beta-1,2 polyglucose chains of glucan

Probab=94.77  E-value=0.044  Score=47.44  Aligned_cols=52  Identities=12%  Similarity=0.071  Sum_probs=42.7

Q ss_pred             eeccceEEEehhHHhHhcCCCc--cCccCC----cccchhhhhhhhcCCcEEEeecce
Q psy6373           6 MIAGGLFSIDRKYFEKLGKYDM--AMSVWG----GENLEISFRVWQCGGSLEIVPCSR   57 (199)
Q Consensus         6 ~maGGlFAI~R~~F~eLGGfDe--Gm~iwG----GEdiELS~RvWlCGG~i~ivPCSR   57 (199)
                      ...|..++++|+-|.++|++..  |+..|+    .||+++|+++...|.++.++|...
T Consensus       170 ~~~G~~~~~Rr~al~~~~~~~~i~g~g~~~~~~l~eD~~l~~~~~~~G~ri~~~~~~~  227 (254)
T cd04191         170 NYWGHNAIIRVAAFMEHCALPVLPGRPPFGGHILSHDFVEAALMRRAGWEVRLAPDLE  227 (254)
T ss_pred             CccceEEEEEHHHHHHhcCCccccCCCCCCCCeecHHHHHHHHHHHcCCEEEEccCCc
Confidence            3457889999999999877753  455564    499999999999999999999764

Periplasmic Glucan Biosynthesis protein ModH is a glucosyltransferase that catalyzes the elongation of beta-1,2 polyglucose chains of glucan, requiring a beta-glucoside as a primer and UDP-glucose as a substrate. Glucans are composed of 5 to 10 units of glucose forming a highly branched structure, where beta-1,2-linked glucose constitutes a linear backbone to which branches are attached by beta-1,6 linkages. In Escherichia coli, glucans are located in the periplasmic space, functioning as regulator of osmolarity. It is synthesized at a maximum when cells are grown in a medium with low osmolarity. It has been shown to span the cytoplasmic membrane.

>PF11397 GlcNAc: Glycosyltransferase (GlcNAc); InterPro: IPR021067 GlcNAc is an enzyme that carries out the first glycosylation step of hydroxylated Skp1; it is found in the cytoplasm and results in a pentasaccharide-linked 'HyPro-143[, ]

Probab=94.58  E-value=0.03  Score=51.51  Aligned_cols=64  Identities=17%  Similarity=0.348  Sum_probs=50.2

Q ss_pred             CCCCceeccceEEEehhHHhHhcCCCccC-ccCCcccchhhhhhhhcCCcEEEeecceEEeeeccC
Q psy6373           1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAM-SVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKR   65 (199)
Q Consensus         1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm-~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~   65 (199)
                      |+.+|-.++|.+..+..+..+ =-|||.+ .++-||.+-+|.|+|-.|..+..=+.+.+.|.|...
T Consensus       202 P~~~~f~aaGF~Fa~~~~~~e-VP~DP~lp~lF~GEE~~~aaRlwT~GYD~Y~P~~~v~~H~Y~r~  266 (343)
T PF11397_consen  202 PVPQPFWAAGFSFAPGHFVRE-VPYDPHLPFLFDGEEISMAARLWTHGYDFYSPTRNVLFHLYSRS  266 (343)
T ss_pred             CeeeceecccEEEcchhheec-CCCCCCcccccccHHHHHHHHHHHcCCccccCCCceeEEEccCC
Confidence            566777787765555554455 4799998 234479999999999999999999999999999843

>PF05679 CHGN: Chondroitin N-acetylgalactosaminyltransferase; InterPro: IPR008428 This family represents Chondroitin N-acetylgalactosaminyltransferase

Probab=94.54  E-value=0.054  Score=51.65  Aligned_cols=56  Identities=16%  Similarity=0.447  Sum_probs=49.3

Q ss_pred             ceEEEehhHHhHh--cCCCccCccCCcccchhhhhhhhcC--CcEEEeecceEEeeeccC
Q psy6373          10 GLFSIDRKYFEKL--GKYDMAMSVWGGENLEISFRVWQCG--GSLEIVPCSRVGHVFRKR   65 (199)
Q Consensus        10 GlFAI~R~~F~eL--GGfDeGm~iwGGEdiELS~RvWlCG--G~i~ivPCSRVgHifR~~   65 (199)
                      |++++-+..|..+  ||||.....||+||+||-=++=..|  -.++=+|..-..|+|+..
T Consensus       412 g~~~~YksDy~~~~~~~~~~~~~gwg~ED~~l~~~~l~~~~~l~V~Ra~ep~L~h~yh~~  471 (499)
T PF05679_consen  412 GMVCFYKSDYMRIRGGGFDLSIRGWGGEDVDLYDKFLKSGHKLHVFRAVEPGLVHRYHPK  471 (499)
T ss_pred             ceEEEEhhhhhhhcccccccccccccccHHHHHHHHHhCCCceEEEEccCCCeEEEeccc
Confidence            6889999999999  9999999999999999988888888  556667788889998865

Proteins have a type II transmembrane topology. The enzyme is involved in the biosynthetic initiation and elongation of chondroitin sulphate and is the key enzyme responsible for the selective chain assembly of chondroitin/dermatan sulphate on the linkage region tetrasaccharide common to various proteoglycans containing chondroitin/dermatan sulphate or heparin/heparan sulphate chains. ; GO: 0016758 transferase activity, transferring hexosyl groups, 0032580 Golgi cisterna membrane

>cd04188 DPG_synthase DPG_synthase is involved in protein N-linked glycosylation

Probab=88.81  E-value=0.42  Score=38.08  Aligned_cols=47  Identities=21%  Similarity=0.253  Sum_probs=37.3

Q ss_pred             ceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373          10 GLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV   58 (199)
Q Consensus        10 GlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV   58 (199)
                      |..+++|....++++.. ....|+ +|+||++|++..|.++..+|.+..
T Consensus       159 g~~~~~r~~~~~~~~~~-~~~~~~-~d~el~~r~~~~g~~~~~vpi~~~  205 (211)
T cd04188         159 GFKLFTRDAARRLFPRL-HLERWA-FDVELLVLARRLGYPIEEVPVRWV  205 (211)
T ss_pred             CceeEcHHHHHHHHhhh-hccceE-eeHHHHHHHHHcCCeEEEcCccee
Confidence            45789999999997543 334564 799999999999999999996543

UDP-glucose:dolichyl-phosphate glucosyltransferase (DPG_synthase) is a transmembrane-bound enzyme of the endoplasmic reticulum involved in protein N-linked glycosylation. This enzyme catalyzes the transfer of glucose from UDP-glucose to dolichyl phosphate.

>PRK11234 nfrB bacteriophage N4 adsorption protein B; Provisional

Probab=87.28  E-value=0.57  Score=47.12  Aligned_cols=47  Identities=23%  Similarity=0.234  Sum_probs=39.4

Q ss_pred             eeccceEEEehh---HHhHhc---CCCccCccCCcccchhhhhhhhcCCcEEEeec
Q psy6373           6 MIAGGLFSIDRK---YFEKLG---KYDMAMSVWGGENLEISFRVWQCGGSLEIVPC   55 (199)
Q Consensus         6 ~maGGlFAI~R~---~F~eLG---GfDeGm~iwGGEdiELS~RvWlCGG~i~ivPC   55 (199)
                      ..+|..++++|.   ...++|   +||+++.   .||++||+|+...|.++.+.|+
T Consensus       228 ~l~G~~~af~Rr~l~al~~~ggg~~~~~~~l---TED~dlg~rL~~~G~~v~f~~~  280 (727)
T PRK11234        228 PSAGVGTCFSRRAVTALLEDGDGIAFDVQSL---TEDYDIGFRLKEKGMREIFVRF  280 (727)
T ss_pred             ccCCceEEEecccHHHHHHhcCCCCcCCCcc---hHHHHHHHHHHHCCCEEEEccc
Confidence            356767999444   578888   6999987   7999999999999999999994

>PRK10018 putative glycosyl transferase; Provisional

Probab=84.44  E-value=1.4  Score=38.85  Aligned_cols=50  Identities=18%  Similarity=0.141  Sum_probs=37.6

Q ss_pred             cceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecc-eEEee
Q psy6373           9 GGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCS-RVGHV   61 (199)
Q Consensus         9 GGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCS-RVgHi   61 (199)
                      |+...+.+..| ..++||+.+.  .+||.+|-+|+...|+.+..+|.+ .+.|+
T Consensus       157 g~~~~~~~~~~-~~~~fd~~~~--~~eDydlwlrl~~~~~~~~~~~~~l~~y~~  207 (279)
T PRK10018        157 GNQVFTWAWRF-KECLFDTELK--AAQDYDIFLRMVVEYGEPWKVEEATQILHI  207 (279)
T ss_pred             Cceeeehhhhh-hhcccCCCCC--ccccHHHHHHHHHhcCceEeeccceEEEEc
Confidence            44443444444 4578999977  369999999999999999999976 55665

>KOG3917|consensus

Probab=81.96  E-value=1.3  Score=40.45  Aligned_cols=45  Identities=27%  Similarity=0.437  Sum_probs=41.2

Q ss_pred             eccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEE
Q psy6373           7 IAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLE   51 (199)
Q Consensus         7 maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~   51 (199)
                      ..||++.+++.-|..+-|....+.+||-||-|+=+|+--.|-++.
T Consensus       181 fvGGILll~~~hyk~~NGMSN~yWGWGlEDDEFy~RI~dagLqlt  225 (310)
T KOG3917|consen  181 FVGGILLLTLKHYKKLNGMSNKYWGWGLEDDEFYLRIIDAGLQLT  225 (310)
T ss_pred             hcceeEEeeHHHHHHhcCccccccccCcccchhhheeccccceEe
Confidence            469999999999999999999999999999999999998886643

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	199
2ffu_A	501	Crystal Structure Of Human Ppgalnact-2 Complexed Wi		7e-53
1xhb_A	472	The Crystal Structure Of Udp-Galnac: Polypeptide Al		5e-41
2d7i_A	570	Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac		2e-30

>pdb|2FFU|A Chain A, Crystal Structure Of Human Ppgalnact-2 Complexed With Udp And Ea2 Length = 501

Iteration: 1
 Score =  202 bits (515), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 88/108 (81%), Positives = 99/108 (91%)
Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           +TPMIAGGLF +D+ YFE+LGKYDM M VWGGENLEISFRVWQCGGSLEI+PCSRVGHVF
Sbjct: 232 KTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVF 291
Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
           RK+HPYTFPGGSG VFARNTRRAAEVWMD YK++YYA VP A+ +P+G
Sbjct: 292 RKQHPYTFPGGSGTVFARNTRRAAEVWMDEYKNFYYAAVPSARNVPYG 339

>pdb|1XHB|A Chain A, The Crystal Structure Of Udp-Galnac: Polypeptide Alpha-N- Acetylgalactosaminyltransferase-T1 Length = 472

Iteration: 1
 Score =  163 bits (413), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 68/109 (62%), Positives = 85/109 (77%)
Query: 3   RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF 62
           RTP +AGGLFSIDR YF+++G YD  M +WGGENLEISFR+WQCGG+LEIV CS VGHVF
Sbjct: 200 RTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVF 259
Query: 63  RKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGE 111
           RK  PYTFPGG+G +  +N RR AEVWMD +K+++Y   P    + +G+
Sbjct: 260 RKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYGD 308

>pdb|2D7I|A Chain A, Crsytal Structure Of Pp-Galnac-T10 With Udp, Galnac And Mn2+ Length = 570

Iteration: 1
 Score =  128 bits (322), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 56/109 (51%), Positives = 74/109 (67%), Gaps = 2/109 (1%)
Query: 4   TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR 63
           +P++AGGLF++DRK+F +LG YD  + +WGGE  EISF+VW CGG +E +PCSRVGH++R
Sbjct: 281 SPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYR 340
Query: 64  KRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGET 112
           K  PY  P G     ARN +R AEVWMD Y  Y Y   P  + +  G+ 
Sbjct: 341 KYVPYKVPAGVS--LARNLKRVAEVWMDEYAEYIYQRRPEYRHLSAGDV 387

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	199
1xhb_A	472	Polypeptide N-acetylgalactosaminyltransferase 1; g	99.95
2ffu_A	501	Ppgalnact-2, polypeptide N-acetylgalactosaminyltra	99.95
2d7i_A	570	Polypeptide N-acetylgalactosaminyltransferase 10;	99.94
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	99.06
2fy7_A	287	Beta-1,4-galactosyltransferase 1; M339H mutant, AP	98.83
2nxv_A	249	ATP synthase subunits region ORF 6; majastridin, A	98.74
4fix_A	657	UDP-galactofuranosyl transferase GLFT2; CAZY GT-2	98.7
3bcv_A	240	Putative glycosyltransferase protein; protein stru	98.35
3lw6_A	287	FI08434P, beta-4-galactosyltransferase 7; protein-	98.33
2z86_A	625	Chondroitin synthase; GT-A, glycosyltransferase A,	97.96
1qg8_A	255	Protein (spore coat polysaccharide biosynthesis P	97.61
3a21_A	614	Putative secreted alpha-galactosidase; beta-alpha-	97.45
4hg6_A	802	Cellulose synthase subunit A; membrane translocati	97.15
3l7i_A	729	Teichoic acid biosynthesis protein F; GT-B fold, m	95.86
3ckj_A	329	Putative uncharacterized protein; mycobacteria, un	93.86

>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17

Probab=99.95  E-value=3.1e-29  Score=220.70  Aligned_cols=117  Identities=58%  Similarity=1.178  Sum_probs=99.9

Q ss_pred             CCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhh
Q psy6373           2 QRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARN   81 (199)
Q Consensus         2 ~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN   81 (199)
                      +++|+++|++|+|+|++|.++|+||++|.+||+||+||++|+|+||+++.++||++|+|+++...||..+.+....+.+|
T Consensus       199 ~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~R~~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~n  278 (472)
T 1xhb_A          199 VRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKN  278 (472)
T ss_dssp             EECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC------------CHHHHHH
T ss_pred             ccCccccceeEEEEHHHHHHcCCCCCcccccCchhHHHHHHHHhcCCeEEEccCcEEEEEccCcCCCCCCcchhhHHHHH
Confidence            46889999999999999999999999999999999999999999999999999999999999999999876655678999


Q ss_pred             HHHHHHhhhccccceeecccCCCCCCCCCCCcccccC
Q psy6373          82 TRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG  118 (199)
Q Consensus        82 ~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~  118 (199)
                      .+|++++|||+|+++||.++|.++.+++|||++++.+
T Consensus       279 ~~r~~~~W~d~~~~~~~~~~p~~~~~~~g~~~~~~~l  315 (472)
T 1xhb_A          279 NRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGL  315 (472)
T ss_dssp             HHHHHHHHCGGGGHHHHHTSTTGGGSCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhCcccccCCCCCHHHHHHH
Confidence            9999999999999999999999899999999988654

>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*

Probab=99.95  E-value=5.5e-29  Score=222.12  Aligned_cols=118  Identities=75%  Similarity=1.365  Sum_probs=110.4

Q ss_pred             CCCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhh
Q psy6373           1 MQRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFAR   80 (199)
Q Consensus         1 p~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~R   80 (199)
                      |+++|.++|++++|+|++|.+||+||++|.+||+||+||++|+|+||+++.++||++|.|++|..+||.+|.+......+
T Consensus       230 ~~~~~~~~g~~~~irr~~~~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~~~~~~~~  309 (501)
T 2ffu_A          230 PIKTPMIAGGLFVMDKFYFEELGKYDMMMDVWGGENLEISFRVWQCGGSLEIIPCSRVGHVFRKQHPYTFPGGSGTVFAR  309 (501)
T ss_dssp             CEECSSCCSSSEEEEHHHHHHTTCCCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCTTCHHHHHHH
T ss_pred             cccCccccceEEEEEHHHHHHhCCCCccccccCcchHHHHHHHHhcCCeEEEccCcEEEEEccCcCCCcCCccchhHHHH
Confidence            34688999999999999999999999999999999999999999999999999999999999999999998765566789


Q ss_pred             hHHHHHHhhhccccceeecccCCCCCCCCCCCcccccC
Q psy6373          81 NTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG  118 (199)
Q Consensus        81 N~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~  118 (199)
                      |..|++++|||+|+.+||.++|.++.+++||||+++.+
T Consensus       310 n~~r~~~~w~d~~~~~~y~~~p~~~~~~~g~~~~r~~l  347 (501)
T 2ffu_A          310 NTRRAAEVWMDEYKNFYYAAVPSARNVPYGNIQSRLEL  347 (501)
T ss_dssp             HHHHHHHHHCGGGHHHHHHHCGGGGGCCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhhcCcccccCCccchHHHHHH
Confidence            99999999999999999999999999999999998654

>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*

Probab=99.94  E-value=3e-28  Score=223.61  Aligned_cols=115  Identities=49%  Similarity=1.012  Sum_probs=107.9

Q ss_pred             CCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhh
Q psy6373           2 QRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARN   81 (199)
Q Consensus         2 ~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN   81 (199)
                      +++|+++|++|+|+|++|.+||+||++|.+||+||+||++|+|+||+++.++||++|+|++|...||..|..  ..+.+|
T Consensus       279 ~~~~~~~g~~~~irr~~~~~iGgfDe~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~r~~~~~~~~~~--~~~~~n  356 (570)
T 2d7i_A          279 FESPVMAGGLFAVDRKWFWELGGYDPGLEIWGGEQYEISFKVWMCGGRMEDIPCSRVGHIYRKYVPYKVPAG--VSLARN  356 (570)
T ss_dssp             EECSSCCSSSEEEEHHHHHHTTSSCTTCCSSSSHHHHHHHHHHHTTCEEEEEEEEEEEECCCSSCCSCCCSS--CCHHHH
T ss_pred             eecccccceEEEEEHHHHHhcCCCCCcccccCcchHHHHHHHHhCCCeEEEccCeEEEEEccccCCCCCCch--hhhHHH
Confidence            468899999999999999999999999999999999999999999999999999999999999999988753  568899


Q ss_pred             HHHHHHhhhccccceeecccCCCCCCCCCCCcccccC
Q psy6373          82 TRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG  118 (199)
Q Consensus        82 ~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~  118 (199)
                      .+|++++|||+|+.+||.++|.++.+++||||+++.|
T Consensus       357 ~~r~~~~W~d~~~~~~y~~~p~~~~~~~g~~~~r~~l  393 (570)
T 2d7i_A          357 LKRVAEVWMDEYAEYIYQRRPEYRHLSAGDVAVQKKL  393 (570)
T ss_dssp             HHHHHHHHCGGGHHHHHTTCGGGTTSCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHhcCcccccCCccchHHHHHH
Confidence            9999999999999999999998899999999988654

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=99.06  E-value=1.2e-10  Score=105.59  Aligned_cols=61  Identities=23%  Similarity=0.458  Sum_probs=57.2

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccC
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKR   65 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~   65 (199)
                      +.+.|++++++|+.|.++||||+.|..||+||+||++|+|.+|+++.++|++.|.|..+..
T Consensus       274 ~~~~g~~~~~rr~~l~~iGgfde~~~~~g~ED~dl~~Rl~~~G~~i~~~p~~~v~H~~~~~  334 (625)
T 2z86_A          274 RFFSGGNVAFAKKWLFRAGWFDEEFTHWGGEDNEFGYRLYREGCYFRSVEGAMAYHQEPPG  334 (625)
T ss_dssp             GGCCTTEEEEETHHHHHHCCCCTTCSSCCCHHHHHHHHHHHTTCEEEECGGGCEEEECCC-
T ss_pred             eEEeeceeeeEHHHHHHhCCCccccccCCcchhhhhhhHHhCCceEEEcccchhhccCCcc
Confidence            4588999999999999999999999999999999999999999999999999999997653

>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...

Probab=98.83  E-value=8e-10  Score=95.04  Aligned_cols=58  Identities=21%  Similarity=0.323  Sum_probs=48.8

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEE-----EeecceEEeee
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLE-----IVPCSRVGHVF   62 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~-----ivPCSRVgHif   62 (199)
                      +.+.||+++++|+.|.++||||+.|.+||+||+||++|++..|.++.     +.|++.+.|..
T Consensus       172 ~~~~G~~~~~rr~~f~~vgGFde~~~g~g~ED~Dl~~Rl~~~G~~i~~~~~~~~~~~~i~H~~  234 (287)
T 2fy7_A          172 VQYFGGVSALSKQQFLTINGFPNNYWGWGGEDDDIFNRLVFRGMSISRPNAVVGTTRHIRHSR  234 (287)
T ss_dssp             TTCCCSEEEEEHHHHHHTTSCCSCCSSCSCHHHHHHHHHHHTTCCCBCCCTTTCEEEECC---
T ss_pred             CceeeeEEEEEHHHHHHcCCCCccccccccchHHHHHHHHHcCCeEEecCcccceeEEEecCC
Confidence            35679999999999999999999999999999999999999999998     45555555543

>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*

Probab=98.74  E-value=1.1e-08  Score=83.73  Aligned_cols=85  Identities=12%  Similarity=0.060  Sum_probs=67.3

Q ss_pred             CCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhhH
Q psy6373           3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNT   82 (199)
Q Consensus         3 rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~   82 (199)
                      +++.+.|++++++|+.   +||||+.+..|..+|+||++|++..|.++.++|. .|.|..+...        .....++.
T Consensus       149 ~v~~~~g~~~~~rr~~---~~gFDe~~~~~~~~D~Dl~~R~~~~G~~~~~~p~-~v~H~~~~~~--------~~~~~~~~  216 (249)
T 2nxv_A          149 RVESLDECFLLMRRLK---PVLNSYDMQGFHYYGADLCLQAEFLGGRAYAIDF-HLHHYGRAIA--------DENFHRLR  216 (249)
T ss_dssp             EEEEECTTEEEEETTB---CCCCCSSCCSSSSHHHHHHHHHHHTTCEEEECCC-CCEECCCCCC--------SHHHHHHH
T ss_pred             EcCeeeeEeeEEEHhh---hCCCCCCCCCcceehhHHHHHHHHcCCeEEEecc-EEEECCCCCC--------hHHHHHHH
Confidence            4567789999999999   8899998888888999999999999999999995 5888653221        23456788


Q ss_pred             HHHHHhhhccccceeec
Q psy6373          83 RRAAEVWMDNYKHYYYA   99 (199)
Q Consensus        83 lRvAEVWmDEYK~~fY~   99 (199)
                      .++...|-.-+....+.
T Consensus       217 ~~~~~k~~~~~~~~~~~  233 (249)
T 2nxv_A          217 QEMAQKYRRWFPGRILH  233 (249)
T ss_dssp             HHHHHHHTTTSTTCEEE
T ss_pred             HHHHHHHhhhCCcceee
Confidence            88888998766654443

>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*

Probab=98.70  E-value=2.2e-08  Score=94.91  Aligned_cols=90  Identities=16%  Similarity=0.073  Sum_probs=69.0

Q ss_pred             CCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhhH
Q psy6373           3 RTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNT   82 (199)
Q Consensus         3 rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~   82 (199)
                      .++.+.|++++|+|+.|.++|+|| .+++++ ||+||++|++..|.++.++|.+.|.|......+-..| -......||.
T Consensus       361 ~v~~~~g~~~lirr~v~~~vGgfd-~~F~~~-ED~Dl~lR~~~~G~ki~~~p~a~V~H~~~~~~~~~s~-~r~Yy~~RN~  437 (657)
T 4fix_A          361 DVDYNGWWTCMIPRQVAEELGQPL-PLFIKW-DDADYGLRAAEHGYPTVTLPGAAIWHMAWSDKDDAID-WQAYFHLRNR  437 (657)
T ss_dssp             CCSBCCTTEEEEEHHHHHHHCSCC-SCSSSS-HHHHHHHHHHHTTCCEEEEEEEEEEECCSSSSCCTTS-THHHHHHHHH
T ss_pred             eccccchhHhHhhHHHHHHhCCCh-hHhccC-cHHHHHHHHHHcCCeEEEECCEEEEEcCcCccccccH-HHHHHHHHHH
Confidence            345678999999999999999999 566664 9999999999999999999999999964322211111 1224567999


Q ss_pred             HHHHHhhhccccc
Q psy6373          83 RRAAEVWMDNYKH   95 (199)
Q Consensus        83 lRvAEVWmDEYK~   95 (199)
                      +.++..+..-...
T Consensus       438 l~~~~k~~~~~~~  450 (657)
T 4fix_A          438 LVVAAMHWDGPKA  450 (657)
T ss_dssp             HHHHHHHCCSCGG
T ss_pred             HHHHHHhCCcchh
Confidence            9998888765433

>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}

Probab=98.35  E-value=2.5e-07  Score=72.32  Aligned_cols=51  Identities=14%  Similarity=0.159  Sum_probs=43.1

Q ss_pred             eccceEEEehhHHhHhc-CCCccCccCCcccchhhhhhhhcCCcEEEeecceE
Q psy6373           7 IAGGLFSIDRKYFEKLG-KYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRV   58 (199)
Q Consensus         7 maGGlFAI~R~~F~eLG-GfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRV   58 (199)
                      ++|++++++|+.|.++| +||+.+..+ +||++|++|++..|+++.++|...+
T Consensus       171 ~~~~~~~~rr~~~~~~g~~f~~~~~~~-~eD~~~~~r~~~~g~~i~~~~~~~~  222 (240)
T 3bcv_A          171 VSAKVVLYRRNLIEKKHLRFVSERILP-SEDLIFNVDVLANSNIVCVLPQTFY  222 (240)
T ss_dssp             HTCSCEEEEHHHHHHTTCCCCCTTTCT-THHHHHHHHHHTTCSCEEECC----
T ss_pred             cchhheeeeHHHHHHcCCccCCCCCcc-CCCHHHHHHHHHhCCEEEEECCCeE
Confidence            45788999999999999 999998755 5999999999999999999998733

>3lw6_A FI08434P, beta-4-galactosyltransferase 7; protein-Mn-UDP complex, glycosyltransferase; HET: UDP; 1.81A {Drosophila melanogaster}

Probab=98.33  E-value=2.3e-07  Score=82.31  Aligned_cols=51  Identities=20%  Similarity=0.322  Sum_probs=46.4

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeec
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPC   55 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPC   55 (199)
                      ....||++|++|+.|..+||||+.|.+||+||.||+.|++..|..+.-.+.
T Consensus       156 ~~~~GGv~a~~re~f~kVNGFsn~f~GWGgEDdD~~~Rl~~~G~~i~Rp~~  206 (287)
T 3lw6_A          156 DNFVGGILLVRREHFKQMNGMSNQYWGWGLEDDEFFVRIRDAGLQVTRPQN  206 (287)
T ss_dssp             TTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCSS
T ss_pred             CCccccEEeccHHHHHHcCCCCCcCcCCCccchHHHHHHHHcCCcEEcCCC
Confidence            346799999999999999999999999999999999999999998866543

>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*

Probab=97.96  E-value=1.6e-05  Score=72.17  Aligned_cols=93  Identities=9%  Similarity=0.125  Sum_probs=64.9

Q ss_pred             CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhhHH
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTR   83 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~l   83 (199)
                      ...+.|++++++|+.|.++|+||+.|.  ++||.||++|++.+| .+.++|...+.|..+... -+  ........++.+
T Consensus       518 ~~~~~~~~~~~~r~~~~~~ggfd~~~~--~~eD~dl~~r~~~~g-~~~~~~~~~~~~r~h~~~-~s--~~~~~~~~~~~~  591 (625)
T 2z86_A          518 SAMICHHFRMFTARAWNLTEGFNESIS--NAVDYDMYLKLSEVG-PFKHINKICYNRVLHGEN-TS--IKKLDIQKENHF  591 (625)
T ss_dssp             TSCCCCSCEEEEHHHHTTTTCCCSSCS--SCHHHHHHHHHTTTS-CEEEEEEEEEEEECC-----C--CSSHHHHHHHHH
T ss_pred             hcccCCceEEEEHHHHHHhCCCCCccC--ChHHHHHHHHHHHhC-CEEEeCCcEEEEEECCCc-cc--hhhHHHHHHHHH
Confidence            345678889999999999999999997  469999999999998 999999876554433221 11  112233456778


Q ss_pred             HHHHhhhccccceeecccC
Q psy6373          84 RAAEVWMDNYKHYYYAEVP  102 (199)
Q Consensus        84 RvAEVWmDEYK~~fY~~~P  102 (199)
                      ++...++..+.-..|...|
T Consensus       592 ~~~~~~l~~~~~~~~~~~~  610 (625)
T 2z86_A          592 KVVNESLSRLGIKKYKYSP  610 (625)
T ss_dssp             HHHHHHTTTTTCCSEEEEE
T ss_pred             HHHHHHHHHcCCchhhcCc
Confidence            8888888775544333333

>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*

Probab=97.61  E-value=3.2e-05  Score=60.96  Aligned_cols=56  Identities=13%  Similarity=-0.019  Sum_probs=47.3

Q ss_pred             ceeccceEEEehhHHhHhc-CC------CccCccCCcccchhhhhhhhcCCcEEEeecceEEeeec
Q psy6373           5 PMIAGGLFSIDRKYFEKLG-KY------DMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFR   63 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLG-Gf------DeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR   63 (199)
                      ..+.|++++++|+.|.++| +|      |+.+  +.+||.+|++|++..| .+.++|...+.|..+
T Consensus       154 ~~~~~~~~~~rr~~~~~~g~~f~~~~~~~~~~--~~~eD~~~~~r~~~~g-~~~~~~~~~~~~r~~  216 (255)
T 1qg8_A          154 CAIDHCSVMHRYSVLEKVKEKFGSYWDESPAF--YRIGDARFFWRVNHFY-PFYPLDEELDLNYIT  216 (255)
T ss_dssp             TTSCGGGEEEETHHHHHHHHHHSSSSCCCGGG--STTHHHHHHHHHTTTC-CBEEEEEEEEEEEEC
T ss_pred             CCCccceEEEEHHHHHhhcccccccccCCccc--chHHHHHHHHHHHHhC-CEEEecCcEEEEEEc
Confidence            4567888999999999999 89      6665  5679999999999985 799999988877654

>3a21_A Putative secreted alpha-galactosidase; beta-alpha-barrel, greek KEY motif, beta-jellyroll, beta-TRE hydrolase; HET: GOL 1PG EPE; 1.51A {Streptomyces avermitilis} PDB: 3a22_A* 3a23_A*

Probab=97.45  E-value=4.3e-06  Score=78.29  Aligned_cols=38  Identities=11%  Similarity=0.046  Sum_probs=34.5

Q ss_pred             hhHHHHHHhhhccccceeecccCCCCCCCCCCCcccccCC
Q psy6373          80 RNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENGG  119 (199)
Q Consensus        80 RN~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~~  119 (199)
                      +|..|+|+||||+||.+||. .| ..++++||||++++|-
T Consensus       423 ~N~~R~aeVwmD~~k~~~~~-~P-~~~~~~gdvs~~~~Lr  460 (614)
T 3a21_A          423 TSSARTATLQVNGQTATTVS-FP-PTGASAGTVSVEVSLS  460 (614)
T ss_dssp             SSSCEEEEEEETTSCCEEEE-EC-CCCSSCEEEEEEEEEC
T ss_pred             CCCCceEEEEECCceeEEEe-cC-CCCCCccceeEEEecc
Confidence            79999999999999999997 57 5688999999999885

>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}

Probab=97.15  E-value=0.00038  Score=66.97  Aligned_cols=56  Identities=11%  Similarity=0.181  Sum_probs=50.4

Q ss_pred             CceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeee
Q psy6373           4 TPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF   62 (199)
Q Consensus         4 sP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHif   62 (199)
                      .+...|++++++|+.|.++||||+...   +||.+|++|++..|.++.++|.+.+.|..
T Consensus       314 ~~~~~G~~~~~Rr~al~~vGgf~~~~~---~ED~~l~~rl~~~G~ri~~~~~~~~~~~~  369 (802)
T 4hg6_A          314 GAFFCGSAAVLRRRALDEAGGFAGETI---TEDAETALEIHSRGWKSLYIDRAMIAGLQ  369 (802)
T ss_dssp             CCCCCSSSEEEEHHHHHHHTTCCCSSS---SHHHHHHHHHHTTTCCEEECCCCCEEECC
T ss_pred             CceecccchhhhHHHHHHcCCcCCCCc---chHHHHHHHHHHcCCeEEEecCCEEEecC
Confidence            456789999999999999999998764   59999999999999999999999998864

>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*

Probab=95.86  E-value=0.0014  Score=61.47  Aligned_cols=54  Identities=0%  Similarity=-0.145  Sum_probs=0.0

Q ss_pred             eccceEEEehhHHhHhc-CCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeee
Q psy6373           7 IAGGLFSIDRKYFEKLG-KYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVF   62 (199)
Q Consensus         7 maGGlFAI~R~~F~eLG-GfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHif   62 (199)
                      ..++.++++|+.|.++| +||+++..  +||++|++|+...|.++.++|...+.|..
T Consensus       152 ~~~~~~~~rr~~l~~~gl~fde~~~~--~ED~d~~~rl~~~g~~i~~~~~~~~~~yr  206 (729)
T 3l7i_A          152 QSACNIIFRTAIVRAHHIRFNENLNT--YVDWSFVLEYMKYVNKFVRIFNFPFYFRG  206 (729)
T ss_dssp             ---------------------------------------------------------
T ss_pred             cchhheeeeHHHHHHcCCCcCCCCCc--ccCHHHHHHHHHhcCCEEEecCcEEEEEE
Confidence            35667899999999999 99999853  69999999999999999999555565543

>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A

Probab=93.86  E-value=0.028  Score=47.47  Aligned_cols=48  Identities=15%  Similarity=0.302  Sum_probs=37.5

Q ss_pred             ccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhh-cCC-cEEEeecceEEe
Q psy6373           8 AGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQ-CGG-SLEIVPCSRVGH   60 (199)
Q Consensus         8 aGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWl-CGG-~i~ivPCSRVgH   60 (199)
                      .||+++++|+.|.++| ||+++    ++|+||.+|+.. +|. .|..+|.....|
T Consensus       214 ~~g~~~~rr~~l~~i~-f~~~~----~~D~~l~~r~~~~~g~~~i~~v~~~~r~h  263 (329)
T 3ckj_A          214 LGGEYAATRELLTSVP-FAPGY----GVEIGLLVDTFDRLGLDAIAQVNLGVREH  263 (329)
T ss_dssp             TCSCEEEEHHHHTTSC-BCCGG----GHHHHHHHHHHHHHCGGGEEEEEEEECEE
T ss_pred             CccceeeeHHHHHhCC-CCCCC----cccHHHHHHHHHhcCCccEeeecceEEec
Confidence            5778999999999998 88764    399999999987 454 377777654444

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	199
d1xhba2	328	c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosa	3e-38
d2bo4a1	381	c.68.1.18 (A:2-382) Mannosylglycerate synthase, MG	3e-04

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 328

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  132 bits (332), Expect = 3e-38
 Identities = 68/109 (62%), Positives = 84/109 (77%)

Query: 2   QRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHV 61
            RTP +AGGLFSIDR YF+++G YD  M +WGGENLEISFR+WQCGG+LEIV CS VGHV
Sbjct: 192 VRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHV 251

Query: 62  FRKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFG 110
           FRK  PYTFPGG+G +  +N RR AEVWMD +K+++Y   P    + +G
Sbjct: 252 FRKATPYTFPGGTGQIINKNNRRLAEVWMDEFKNFFYIISPGVTKVDYG 300

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]} Length = 381

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: MGS-like
domain: Mannosylglycerate synthase, MGS
species: Rhodothermus marinus [TaxId: 29549]

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 10/131 (7%), Positives = 19/131 (14%), Gaps = 47/131 (35%)

Query: 9   GGLFSIDRKYFEKL-------GKYDMAMSVW-----------------GGENLEISFR-- 42
           GG   + R+    L        + D  +                            +   
Sbjct: 163 GGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKAHRLYGGL 222

Query: 43  -------------VWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSG---NVFARNTRRAA 86
                        +      +   P           HP+  P             T    
Sbjct: 223 DDLRTMLVECFAAIQSLQHEVVGQPAIHRQ-----EHPHRVPVHIAERVGYDVEATLHRL 277

Query: 87  EVWMDNYKHYY 97
                  +   
Sbjct: 278 MQHWTPRQVEL 288

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	199
d1xhba2	328	Polypeptide N-acetylgalactosaminyltransferase 1, N	99.97
d1pzta_	271	beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos	98.08
d2bo4a1	381	Mannosylglycerate synthase, MGS {Rhodothermus mari	97.88
d1qg8a_	255	Spore coat polysaccharide biosynthesis protein Sps	92.14

>d1xhba2 c.68.1.17 (A:95-422) Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
domain: Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.97  E-value=6.8e-32  Score=223.14  Aligned_cols=117  Identities=58%  Similarity=1.178  Sum_probs=100.0

Q ss_pred             CCCceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEeecceEEeeeccCCCCCCCCCCchhhhhh
Q psy6373           2 QRTPMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGHVFRKRHPYTFPGGSGNVFARN   81 (199)
Q Consensus         2 ~rsP~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN   81 (199)
                      ..+|++.|+||+++|+.|.++||||++|..||+||+|||+|+|++|+++.++|+++|.|++|...||..+.+....+.+|
T Consensus       192 ~~~~~~~g~~~~irr~~f~~vGgfDe~~~~~g~ED~Dl~~R~~~~G~~i~~~p~~~v~H~~~~~~~~~~~~~~~~~~~~N  271 (328)
T d1xhba2         192 VRTPTMAGGLFSIDRDYFQEIGTYDAGMDIWGGENLEISFRIWQCGGTLEIVTCSHVGHVFRKATPYTFPGGTGQIINKN  271 (328)
T ss_dssp             EECSBCCSSSEEEEHHHHHHTTSCCTTSCTTCCCCSHHHHHHHHTTCEEEEEEEEEEEEEC------------CHHHHHH
T ss_pred             cccceecceeeeeeHHHHHHhCCCCCCCcCcCchHHHHHHHHHHhCCeEEEeCCeEEEEeCCCCCCCCCCchhhHHHHHH
Confidence            46788999999999999999999999999999999999999999999999999999999999999999887777788999


Q ss_pred             HHHHHHhhhccccceeecccCCCCCCCCCCCcccccC
Q psy6373          82 TRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENG  118 (199)
Q Consensus        82 ~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~  118 (199)
                      .+|+|+||||+||++||..+|.+..+++|||++++.|
T Consensus       272 ~~r~~e~wl~~yk~~~~~~~~~~~~~~~~~i~~r~~L  308 (328)
T d1xhba2         272 NRRLAEVWMDEFKNFFYIISPGVTKVDYGDISSRLGL  308 (328)
T ss_dssp             HHHHHHHHCGGGGHHHHHTSTTGGGSCCCCCHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHHhCcccccCCcccHHHHHHH
Confidence            9999999999999999999999999999999988654

>d1pzta_ c.68.1.2 (A:) beta 1,4 galactosyltransferase (b4GalT1) {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: beta 1,4 galactosyltransferase (b4GalT1)
domain: beta 1,4 galactosyltransferase (b4GalT1)
species: Cow (Bos taurus) [TaxId: 9913]

Probab=98.08  E-value=2.1e-06  Score=72.76  Aligned_cols=50  Identities=20%  Similarity=0.190  Sum_probs=45.3

Q ss_pred             ceeccceEEEehhHHhHhcCCCccCccCCcccchhhhhhhhcCCcEEEee
Q psy6373           5 PMIAGGLFSIDRKYFEKLGKYDMAMSVWGGENLEISFRVWQCGGSLEIVP   54 (199)
Q Consensus         5 P~maGGlFAI~R~~F~eLGGfDeGm~iwGGEdiELS~RvWlCGG~i~ivP   54 (199)
                      +...||+++++|+.|.+|+||+..+.+|||||-||..|+...|-.+.-.+
T Consensus       156 ~~~~GGv~~~~k~~f~kINGfsN~ywGWGgEDddl~~R~~~~g~~i~R~~  205 (271)
T d1pzta_         156 VQYFGGVSALSKQQFLSINGFPNNYWGAGGEDDDIYNRLAFRGMSVSRPN  205 (271)
T ss_dssp             TTCCCSEEEEEHHHHHHTTSCCSCCCSSSSHHHHHHHHHHHTTCCCBCCC
T ss_pred             ccccceeeeecHHHHhhcCCCCccccCCccccHHHHHHHHHcCCeEEccC
Confidence            34579999999999999999999999999999999999999998876544

>d2bo4a1 c.68.1.18 (A:2-382) Mannosylglycerate synthase, MGS {Rhodothermus marinus [TaxId: 29549]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: MGS-like
domain: Mannosylglycerate synthase, MGS
species: Rhodothermus marinus [TaxId: 29549]

Probab=97.88  E-value=3.1e-07  Score=81.13  Aligned_cols=108  Identities=8%  Similarity=-0.057  Sum_probs=79.1

Q ss_pred             cceEEEehhHHhHh-------cCCCccCccC-----------------Ccccchhhhh---------------hhhcCCc
Q psy6373           9 GGLFSIDRKYFEKL-------GKYDMAMSVW-----------------GGENLEISFR---------------VWQCGGS   49 (199)
Q Consensus         9 GGlFAI~R~~F~eL-------GGfDeGm~iw-----------------GGEdiELS~R---------------vWlCGG~   49 (199)
                      +|.||++|+.+..|       +-.|=||++|                 |+.++.-+|+               +|+|++.
T Consensus       163 ~G~~a~~R~~~~~L~~~~~v~~~~~~G~Di~lt~~A~~~G~rI~EV~i~~~~l~~~f~~v~~~~f~l~~~~~~~W~~~~~  242 (381)
T d2bo4a1         163 GGELLMRREVAAMLYEDERVRRRSDWGIDTLYTFVTVQQGVSIYECYIPEGKAHRLYGGLDDLRTMLVECFAAIQSLQHE  242 (381)
T ss_dssp             CCCEEEEHHHHHHHHHCHHHHTCCSTTHHHHHHHHHHHTTCCEEEEECTTCCCCCCSCCGGGGHHHHHHHHHHHHHHTTC
T ss_pred             cccceeeHHHHHHhhhhccccccCCcccchHHHHHHHHcCCeEEecCCCHHHHHHHHHHHHHHHHHHHHHHHHHheecce
Confidence            78999999999876       2233356666                 6777776666               7999999


Q ss_pred             EEEeecceEEeeeccCCCCCCCCCCchhhhhhHHHHHHhhhccccceeecccCCCCCCCCCCCcccccCCCC
Q psy6373          50 LEIVPCSRVGHVFRKRHPYTFPGGSGNVFARNTRRAAEVWMDNYKHYYYAEVPLAKTIPFGETLNLENGGSS  121 (199)
Q Consensus        50 i~ivPCSRVgHifR~~~PY~~p~g~~~~i~RN~lRvAEVWmDEYK~~fY~~~P~~~~id~GDISe~k~~~~~  121 (199)
                      ++..||+++| .+....|+-.+.. .+.-+.|.++.+.+|+++|+..+....+.   ..+|+|++..+++..
T Consensus       243 ~~~~p~~~~g-~~~~~~p~~~~e~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~  309 (381)
T d2bo4a1         243 VVGQPAIHRQ-EHPHRVPVHIAER-VGYDVEATLHRLMQHWTPRQVELLELFTT---PVREGLRTCQRRPAF  309 (381)
T ss_dssp             CCCSCCCEEE-CCCCCCCHHHHTC-CCSCHHHHHHHHTSSCCHHHHHHGGGSCH---HHHHHHHHTTTSCCC
T ss_pred             eccccceeec-cCcccCCCCCCCc-cccCHHHHHHHHHHhhHHHHHHHHHhcCH---HHHHHHHHhcccccC
Confidence            9999999999 5544455332211 24457899999999999999988776552   347888888887654

>d1qg8a_ c.68.1.1 (A:) Spore coat polysaccharide biosynthesis protein SpsA {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-diphospho-sugar transferases
superfamily: Nucleotide-diphospho-sugar transferases
family: Spore coat polysaccharide biosynthesis protein SpsA
domain: Spore coat polysaccharide biosynthesis protein SpsA
species: Bacillus subtilis [TaxId: 1423]

Probab=92.14  E-value=0.058  Score=40.54  Aligned_cols=52  Identities=10%  Similarity=-0.080  Sum_probs=39.8

Q ss_pred             ccceEEEehhHHhHhcC-----CCccCccCCcccchhhhhhhhcCCcEEEeecceEEe
Q psy6373           8 AGGLFSIDRKYFEKLGK-----YDMAMSVWGGENLEISFRVWQCGGSLEIVPCSRVGH   60 (199)
Q Consensus         8 aGGlFAI~R~~F~eLGG-----fDeGm~iwGGEdiELS~RvWlCGG~i~ivPCSRVgH   60 (199)
                      .++.++++|++|.++++     ||+....|..+|.+|.+|+. +++.+..++..-+.+
T Consensus       157 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~dl~lrl~-~~~~~~~i~~~l~~~  213 (255)
T d1qg8a_         157 DHCSVMHRYSVLEKVKEKFGSYWDESPAFYRIGDARFFWRVN-HFYPFYPLDEELDLN  213 (255)
T ss_dssp             CGGGEEEETHHHHHHHHHHSSSSCCCGGGSTTHHHHHHHHHT-TTCCBEEEEEEEEEE
T ss_pred             cchhHHHHHHHHHHHHHhhCCCccccchhcchhhHHHHHHHH-cCCCEEEecCCEEEE
Confidence            34557899999988754     66777778899999999995 577888887544433