Psyllid ID: psy6598

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150----
Protein Sequence
MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQECVQKINSNPTTKLLNNNSIAILDTSGSSNNNEEKYFLMELSIPNAKLEN
Secondary Structure (PSIPRED)
ccccccccccccccccccccHHHHHccccccccccccccccccccccccccHHHHccccccccccccccccccccccccHHHHcccccccccccccccHHHHHHcccccccccccccccccccHHHHHHHcccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEccccHHHHHHHHcccccccEcccccccccEccccHHHEHHHHcccccccccccccccEccccHHHHHHHHcccccccEccccccccccccHHHHHEEcccHHHHHHHHHHccccccccccccccEccccHHHHHHHccc
Coil and Loop (DISEMBL)
mkpffyfpwdckisfasatnyknhmrihsgekpyvcqvrdCQKRFTEYSSLYKhtlvhsdirpficdrcprsyrqLCTLNvhkktnhresknkkpsnrnniVKQECVQkinsnpttkllnnnsiaildtsgssnnneeKYFLMELSipnaklen
Flexible Loop (DISEMBL)
MKPFFYFPWDCKISFASATNYKNHmrihsgekpyvcQVRDCQKRFTEYSSLykhtlvhsdirpFICDRCPRSYRQLCTlnvhkktnhresknkkpsnrnniVKQECVQKinsnpttkllnnnSIAILDTSGSSNNNEEKYFLMelsipnaklen
Low Complexity Region (SEG)
MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQECVQKINSNPTTKLLNNNSIAILDTSGSSNNNEEKYFLMELSIPNAKLEN
Disordered region (IsUnstruct)
***FFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVH************************************************************************
Disordered Region (DISOPRED)
MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRN************SNPT*K****************NNNEEKYFLMELSIPNA****
Disordered Region (DISEMBL)
MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHK*************NRNNIVKQECVQKINSNPTTKLLNNNSIAILDTSGSSNNNEEKYFLMELSIPNAKLEN
Disordered Region (DISPRO)
*KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQECVQKINSNPTTKLLNNNSIAILDTSGSSNNNEEKYFLMELSIP******
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQECVQKINSNPTTKLLNNNSIAILDTSGSSNNNEEKYFLMELSIPNAKLEN
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	154	2.2.26 [Sep-21-2011]
Q1LYE3	623	Zinc finger protein 143 O	yes	N/A	0.571	0.141	0.555	4e-28
A6QQW0	613	Zinc finger protein 143 O	yes	N/A	0.571	0.143	0.544	3e-27
P52747	638	Zinc finger protein 143 O	yes	N/A	0.571	0.137	0.544	4e-27
Q5XIU2	638	Zinc finger protein 143 O	yes	N/A	0.571	0.137	0.544	5e-27
O70230	638	Zinc finger protein 143 O	yes	N/A	0.571	0.137	0.544	5e-27
Q58DZ6	567	Zinc finger protein 143 O	yes	N/A	0.655	0.178	0.495	1e-26
Q91853	565	Zinc finger protein 143 O	N/A	N/A	0.655	0.178	0.495	2e-26
P36508	570	Zinc finger protein 76 OS	no	N/A	0.551	0.149	0.556	2e-25
Q8BMU0	568	Zinc finger protein 76 OS	no	N/A	0.551	0.149	0.556	3e-25
B4F7E9	568	Zinc finger protein 76 OS	no	N/A	0.694	0.188	0.486	4e-25

>sp|Q1LYE3|ZN143_DANRE Zinc finger protein 143 OS=Danio rerio GN=znf143 PE=2 SV=2

 Score =  123 bits (308), Expect = 4e-28,   Method: Composition-based stats.
 Identities = 50/90 (55%), Positives = 70/90 (77%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++    +C  +FASATNYKNHMRIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 348 RPYYCAEPNCGRAFASATNYKNHMRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTPC 407

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 408 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 437

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.
Danio rerio (taxid: 7955)

>sp|A6QQW0|ZN143_BOVIN Zinc finger protein 143 OS=Bos taurus GN=ZNF143 PE=2 SV=1

 Score =  120 bits (301), Expect = 3e-27,   Method: Composition-based stats.
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 330 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 389

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 390 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 419

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Bos taurus (taxid: 9913)

>sp|P52747|ZN143_HUMAN Zinc finger protein 143 OS=Homo sapiens GN=ZNF143 PE=1 SV=2

 Score =  120 bits (301), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 355 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 414

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 415 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 444

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Homo sapiens (taxid: 9606)

>sp|Q5XIU2|ZN143_RAT Zinc finger protein 143 OS=Rattus norvegicus GN=Znf143 PE=2 SV=2

 Score =  120 bits (300), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 355 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 414

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 415 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 444

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Rattus norvegicus (taxid: 10116)

>sp|O70230|ZN143_MOUSE Zinc finger protein 143 OS=Mus musculus GN=Znf143 PE=1 SV=2

 Score =  120 bits (300), Expect = 5e-27,   Method: Composition-based stats.
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 355 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 414

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 415 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 444

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Mus musculus (taxid: 10090)

>sp|Q58DZ6|ZN143_XENTR Zinc finger protein 143 OS=Xenopus tropicalis GN=znf143 PE=2 SV=2

 Score =  118 bits (295), Expect = 1e-26,   Method: Composition-based stats.
 Identities = 51/103 (49%), Positives = 73/103 (70%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 348 RPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 407

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQ 104
           +P+ C+ C ++Y+Q+ TL +HK+T H +++  +    +  V Q
Sbjct: 408 KPYNCNHCGKTYKQISTLAMHKRTAHNDTEPIEEEQESFFVPQ 450

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.

Xenopus tropicalis (taxid: 8364)

>sp|Q91853|ZN143_XENLA Zinc finger protein 143 OS=Xenopus laevis GN=znf143 PE=1 SV=2

 Score =  118 bits (295), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 51/103 (49%), Positives = 73/103 (70%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 348 RPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 407

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQ 104
           +P+ C+ C ++Y+Q+ TL +HK+T H +++  +    +  V Q
Sbjct: 408 KPYNCNHCGKTYKQISTLAMHKRTAHNDTEPIEEDQESFFVPQ 450

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.

Xenopus laevis (taxid: 8355)

>sp|P36508|ZNF76_HUMAN Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE=2 SV=2

 Score =  114 bits (285), Expect = 2e-25,   Method: Composition-based stats.
 Identities = 49/88 (55%), Positives = 63/88 (71%)

Query: 11  CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
           C   F SATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  +P+ C  C 
Sbjct: 292 CGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCG 351

Query: 71  RSYRQLCTLNVHKKTNHRESKNKKPSNR 98
           ++YRQ  TL +HK++ H E +  + S +
Sbjct: 352 KTYRQTSTLAMHKRSAHGELEATEESEQ 379

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8BMU0|ZNF76_MOUSE Zinc finger protein 76 OS=Mus musculus GN=Znf76 PE=2 SV=1

 Score =  114 bits (284), Expect = 3e-25,   Method: Composition-based stats.
 Identities = 49/88 (55%), Positives = 63/88 (71%)

Query: 11  CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
           C   F SATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  +P+ C  C 
Sbjct: 292 CGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCG 351

Query: 71  RSYRQLCTLNVHKKTNHRESKNKKPSNR 98
           ++YRQ  TL +HK++ H E +  + S +
Sbjct: 352 KTYRQTSTLAMHKRSAHGELEATEESEQ 379

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|B4F7E9|ZNF76_RAT Zinc finger protein 76 OS=Rattus norvegicus GN=Znf76 PE=2 SV=1

 Score =  113 bits (283), Expect = 4e-25,   Method: Composition-based stats.
 Identities = 53/109 (48%), Positives = 70/109 (64%), Gaps = 2/109 (1%)

Query: 11  CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
           C   F SATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  +P+ C  C 
Sbjct: 292 CGRGFTSATNYKNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCG 351

Query: 71  RSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQ--ECVQKINSNPTTK 117
           ++YRQ  TL +HK++ H E +  + S +    +Q  E       +P+ K
Sbjct: 352 KTYRQTSTLAMHKRSAHGELEATEESEQALYEQQQLEAASAAEESPSPK 400

May be involved in transcriptional regulation.

Rattus norvegicus (taxid: 10116)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	154
47220583	693	unnamed protein product [Tetraodon nigro	0.558	0.124	0.577	4e-27
74095971	626	selenocysteine tRNA activating factor [T	0.558	0.137	0.577	2e-26
229892179	623	RecName: Full=Zinc finger protein 143; A	0.571	0.141	0.555	2e-26
117167923	623	Znf143 protein [Danio rerio]	0.571	0.141	0.555	3e-26
37595486	623	selenocysteine tRNA activating factor [D	0.571	0.141	0.555	3e-26
348535946	627	PREDICTED: zinc finger protein 143-like	0.571	0.140	0.566	3e-26
41055799	570	zinc finger protein 143 [Danio rerio] gi	0.571	0.154	0.555	5e-26
432860191	627	PREDICTED: zinc finger protein 143-like	0.571	0.140	0.566	7e-26
291237370	626	PREDICTED: zinc finger protein 76 (expre	0.662	0.162	0.519	1e-25
73988469	670	PREDICTED: zinc finger protein 143 isofo	0.571	0.131	0.544	1e-25

>gi|47220583|emb|CAG05609.1| unnamed protein product [Tetraodon nigroviridis]

 Score =  125 bits (315), Expect = 4e-27,   Method: Composition-based stats.
 Identities = 52/90 (57%), Positives = 70/90 (77%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  SFASATNYKNHMRIH+GEKPYVC V  CQKRFTEYSSLYKH +VH+  
Sbjct: 394 RPYYCSEPSCGRSFASATNYKNHMRIHTGEKPYVCTVPGCQKRFTEYSSLYKHHVVHTPC 453

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 454 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 483

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|74095971|ref|NP_001027837.1| selenocysteine tRNA activating factor [Takifugu rubripes] gi|37595488|gb|AAQ94618.1| selenocysteine tRNA activating factor [Takifugu rubripes]

 Score =  124 bits (310), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 52/90 (57%), Positives = 70/90 (77%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  SFASATNYKNHMRIH+GEKPYVC V  CQKRFTEYSSLYKH +VH+  
Sbjct: 353 RPYYCSEPSCGRSFASATNYKNHMRIHTGEKPYVCTVPGCQKRFTEYSSLYKHHVVHTPC 412

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 413 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 442

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|229892179|sp|Q1LYE3.2|ZN143_DANRE RecName: Full=Zinc finger protein 143; AltName: Full=Selenocysteine tRNA gene transcription-activating factor

 Score =  123 bits (308), Expect = 2e-26,   Method: Composition-based stats.
 Identities = 50/90 (55%), Positives = 70/90 (77%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++    +C  +FASATNYKNHMRIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 348 RPYYCAEPNCGRAFASATNYKNHMRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTPC 407

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 408 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 437

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|117167923|gb|AAI24736.1| Znf143 protein [Danio rerio]

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/90 (55%), Positives = 70/90 (77%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++    +C  +FASATNYKNHMRIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 348 RPYYCAEPNCGRAFASATNYKNHMRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTPC 407

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 408 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 437

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|37595486|gb|AAQ94617.1| selenocysteine tRNA activating factor [Danio rerio]

 Score =  123 bits (308), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 50/90 (55%), Positives = 70/90 (77%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++    +C  +FASATNYKNHMRIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 348 RPYYCAEPNCGRAFASATNYKNHMRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTPC 407

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 408 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 437

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348535946|ref|XP_003455458.1| PREDICTED: zinc finger protein 143-like [Oreochromis niloticus]

 Score =  122 bits (307), Expect = 3e-26,   Method: Composition-based stats.
 Identities = 51/90 (56%), Positives = 70/90 (77%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  SFASATNYKNHMRIH+GEKPYVC V  C+KRFTEYSSLYKH +VH+  
Sbjct: 353 RPYYCSEPSCGRSFASATNYKNHMRIHTGEKPYVCTVPGCEKRFTEYSSLYKHHVVHTPC 412

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 413 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 442

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|41055799|ref|NP_957273.1| zinc finger protein 143 [Danio rerio] gi|33416887|gb|AAH55577.1| Zinc finger protein 143 [Danio rerio]

 Score =  122 bits (306), Expect = 5e-26,   Method: Composition-based stats.
 Identities = 50/90 (55%), Positives = 70/90 (77%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++    +C  +FASATNYKNHMRIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 295 RPYYCAEPNCGRAFASATNYKNHMRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTPC 354

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 355 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 384

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432860191|ref|XP_004069436.1| PREDICTED: zinc finger protein 143-like [Oryzias latipes]

 Score =  122 bits (305), Expect = 7e-26,   Method: Composition-based stats.
 Identities = 51/90 (56%), Positives = 70/90 (77%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  SFASATNYKNHMRIH+GEKPYVC V  C+KRFTEYSSLYKH +VH+  
Sbjct: 353 RPYYCSEPSCGRSFASATNYKNHMRIHTGEKPYVCTVPGCEKRFTEYSSLYKHHVVHTPC 412

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 413 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 442

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|291237370|ref|XP_002738611.1| PREDICTED: zinc finger protein 76 (expressed in testis)-like [Saccoglossus kowalevskii]

 Score =  121 bits (303), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 54/104 (51%), Positives = 73/104 (70%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P+      C  +FASATNYKNHMRIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 372 RPYICREDGCGRAFASATNYKNHMRIHTGEKPYVCTVAGCGKRFTEYSSLYKHHVVHTHS 431

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQE 105
           +P+IC+ C ++YRQ  TL +HK+T H +S   + +  +   +Q+
Sbjct: 432 KPYICNHCGKTYRQTSTLAMHKRTAHGDSDATEETEAHLFAQQQ 475

Source: Saccoglossus kowalevskii

Species: Saccoglossus kowalevskii

Genus: Saccoglossus

Family: Harrimaniidae

Class: Enteropneusta

Phylum: Hemichordata

Superkingdom: Eukaryota

>gi|73988469|ref|XP_542502.2| PREDICTED: zinc finger protein 143 isoform 1 [Canis lupus familiaris]

 Score =  120 bits (302), Expect = 1e-25,   Method: Composition-based stats.
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct: 387 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 446

Query: 62  RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
           +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct: 447 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 476

Source: Canis lupus familiaris

Species: Canis lupus

Genus: Canis

Family: Canidae

Order: Carnivora

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	154
ZFIN|ZDB-GENE-040426-1586	647	znf143b "zinc finger protein 1	0.584	0.139	0.555	1.1e-25
UNIPROTKB|E7EN86	610	ZNF143 "Zinc finger protein 14	0.584	0.147	0.544	5.4e-25
UNIPROTKB|A6QQW0	613	ZNF143 "Zinc finger protein 14	0.584	0.146	0.544	5.5e-25
UNIPROTKB|E7ER34	637	ZNF143 "Zinc finger protein 14	0.584	0.141	0.544	6.1e-25
UNIPROTKB|E1C5B8	637	ZNF143 "Uncharacterized protei	0.584	0.141	0.544	6.1e-25
UNIPROTKB|P52747	638	ZNF143 "Zinc finger protein 14	0.584	0.141	0.544	6.1e-25
MGI|MGI:1277969	638	Zfp143 "zinc finger protein 14	0.584	0.141	0.544	6.1e-25
RGD|1305662	638	Zfp143 "zinc finger protein 14	0.584	0.141	0.544	6.1e-25
UNIPROTKB|Q5XIU2	638	Znf143 "Zinc finger protein 14	0.584	0.141	0.544	6.1e-25
UNIPROTKB|I3LDQ7	644	ZNF143 "Uncharacterized protei	0.584	0.139	0.544	6.3e-25

ZFIN|ZDB-GENE-040426-1586 znf143b "zinc finger protein 143b" [Danio rerio (taxid:7955)]

 Score = 299 (110.3 bits), Expect = 1.1e-25, P = 1.1e-25
 Identities = 50/90 (55%), Positives = 70/90 (77%)

Query:     2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             +P++    +C  +FASATNYKNHMRIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct:   372 RPYYCAEPNCGRAFASATNYKNHMRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTPC 431

Query:    62 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
             +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct:   432 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 461

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IDA

GO:0005634 "nucleus" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

UNIPROTKB|E7EN86 ZNF143 "Zinc finger protein 143" [Homo sapiens (taxid:9606)]

 Score = 292 (107.8 bits), Expect = 5.4e-25, P = 5.4e-25
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query:     2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct:   327 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 386

Query:    62 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
             +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct:   387 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 416

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|A6QQW0 ZNF143 "Zinc finger protein 143" [Bos taurus (taxid:9913)]

 Score = 292 (107.8 bits), Expect = 5.5e-25, P = 5.5e-25
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query:     2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct:   330 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 389

Query:    62 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
             +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct:   390 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 419

GO:0005634 "nucleus" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E7ER34 ZNF143 "Zinc finger protein 143" [Homo sapiens (taxid:9606)]

 Score = 292 (107.8 bits), Expect = 6.1e-25, P = 6.1e-25
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query:     2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct:   354 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 413

Query:    62 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
             +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct:   414 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 443

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1C5B8 ZNF143 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 292 (107.8 bits), Expect = 6.1e-25, P = 6.1e-25
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query:     2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct:   354 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 413

Query:    62 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
             +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct:   414 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 443

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

UNIPROTKB|P52747 ZNF143 "Zinc finger protein 143" [Homo sapiens (taxid:9606)]

 Score = 292 (107.8 bits), Expect = 6.1e-25, P = 6.1e-25
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query:     2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct:   355 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 414

Query:    62 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
             +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct:   415 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 444

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0006366 "transcription from RNA polymerase II promoter" evidence=TAS

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0006359 "regulation of transcription from RNA polymerase III promoter" evidence=TAS

GO:0005654 "nucleoplasm" evidence=TAS

GO:0006383 "transcription from RNA polymerase III promoter" evidence=TAS

GO:0010467 "gene expression" evidence=TAS

MGI|MGI:1277969 Zfp143 "zinc finger protein 143" [Mus musculus (taxid:10090)]

 Score = 292 (107.8 bits), Expect = 6.1e-25, P = 6.1e-25
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query:     2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct:   355 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 414

Query:    62 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
             +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct:   415 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 444

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

RGD|1305662 Zfp143 "zinc finger protein 143" [Rattus norvegicus (taxid:10116)]

 Score = 292 (107.8 bits), Expect = 6.1e-25, P = 6.1e-25
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query:     2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct:   355 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 414

Query:    62 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
             +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct:   415 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 444

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA;ISO

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q5XIU2 Znf143 "Zinc finger protein 143" [Rattus norvegicus (taxid:10116)]

 Score = 292 (107.8 bits), Expect = 6.1e-25, P = 6.1e-25
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query:     2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct:   355 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 414

Query:    62 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
             +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct:   415 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 444

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|I3LDQ7 ZNF143 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 292 (107.8 bits), Expect = 6.3e-25, P = 6.3e-25
 Identities = 49/90 (54%), Positives = 69/90 (76%)

Query:     2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             +P++     C  +FASATNYKNH+RIH+GEKPYVC V  C KRFTEYSSLYKH +VH+  
Sbjct:   361 RPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPGCDKRFTEYSSLYKHHVVHTHS 420

Query:    62 RPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
             +P+ C+ C ++Y+Q+ TL +HK+T H +++
Sbjct:   421 KPYNCNHCGKTYKQISTLAMHKRTAHNDTE 450

GO:0003677 "DNA binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
A6QQW0	ZN143_BOVIN	No assigned EC number	0.5444	0.5714	0.1435	yes	N/A
Q1LYE3	ZN143_DANRE	No assigned EC number	0.5555	0.5714	0.1412	yes	N/A
P52747	ZN143_HUMAN	No assigned EC number	0.5444	0.5714	0.1379	yes	N/A
O70230	ZN143_MOUSE	No assigned EC number	0.5444	0.5714	0.1379	yes	N/A
Q5XIU2	ZN143_RAT	No assigned EC number	0.5444	0.5714	0.1379	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	154
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.002

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 15/27 (55%), Positives = 18/27 (66%), Gaps = 2/27 (7%)

Query: 20 NYKNHMRIHSGEKPYVCQVRDCQKRFT 46
          N + HMR H+GEKPY C V  C K F+
Sbjct: 1  NLRRHMRTHTGEKPYKCPV--CGKSFS 25

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	154
KOG2462|consensus	279		99.92
KOG2462|consensus	279		99.89
KOG3576|consensus	267		99.76
KOG3623|consensus	1007		99.74
KOG1074|consensus	958		99.58
KOG3623|consensus	1007		99.51
KOG3576|consensus	267		99.48
PHA00733	128	hypothetical protein	99.4
KOG1074|consensus	958		99.35
KOG3608|consensus	467		99.29
KOG3608|consensus	467		99.24
PHA02768	55	hypothetical protein; Provisional	99.19
PHA02768	55	hypothetical protein; Provisional	99.09
PLN03086	567	PRLI-interacting factor K; Provisional	99.06
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	99.03
KOG3993|consensus	500		98.9
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.88
PHA00733	128	hypothetical protein	98.82
PHA00616	44	hypothetical protein	98.76
PLN03086	567	PRLI-interacting factor K; Provisional	98.72
PHA00732	79	hypothetical protein	98.53
KOG3993|consensus	500		98.49
PHA00732	79	hypothetical protein	98.46
PHA00616	44	hypothetical protein	98.44
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.34
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.29
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.25
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.23
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.21
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.11
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.05
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.0
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.9
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.86
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.86
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.63
smart00355	26	ZnF_C2H2 zinc finger.	97.45
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.37
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.36
smart00355	26	ZnF_C2H2 zinc finger.	97.33
PRK04860	160	hypothetical protein; Provisional	97.22
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.16
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.07
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.86
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.52
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	96.28
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.26
COG5048	467	FOG: Zn-finger [General function prediction only]	95.96
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.5
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.43
COG5048	467	FOG: Zn-finger [General function prediction only]	95.19
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	95.03
KOG1146|consensus	1406		94.69
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.54
KOG2482|consensus	423		94.16
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.06
KOG1146|consensus	1406		93.81
KOG2893|consensus	341		93.72
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	93.59
KOG2231|consensus	669		93.58
COG4049	65	Uncharacterized protein containing archaeal-type C	93.4
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	93.37
KOG4173|consensus	253		92.93
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	92.42
KOG2231|consensus	669		92.04
KOG2893|consensus	341		92.01
PRK04860	160	hypothetical protein; Provisional	91.03
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	90.74
KOG4173|consensus	253		90.12
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	89.99
KOG2482|consensus	423		88.99
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	88.58
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	86.64
KOG2186|consensus	276		85.92
KOG2785|consensus	390		85.7
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	85.13
KOG2785|consensus	390		84.84
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	84.16
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	83.43
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	82.5
COG4049	65	Uncharacterized protein containing archaeal-type C	82.33
COG1592	166	Rubrerythrin [Energy production and conversion]	82.27
PF04959	214	ARS2: Arsenite-resistance protein 2; InterPro: IPR	81.74
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	81.62
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	81.58
smart00531	147	TFIIE Transcription initiation factor IIE.	81.5
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	81.18
KOG2186|consensus	276		80.95
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	80.56
PRK06266	178	transcription initiation factor E subunit alpha; V	80.53
KOG4167|consensus	907		80.44
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	80.34

>KOG2462|consensus

Probab=99.92  E-value=2.7e-25  Score=152.94  Aligned_cols=105  Identities=25%  Similarity=0.464  Sum_probs=97.1

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHH
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNV   81 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   81 (154)
                      +.+.|+  +|||.|.+...|..|+++|+  -+++|.+  |||.|.+...|+.|+|+|+|+|||.|+.|+|.|.-+++|+.
T Consensus       160 ka~~C~--~C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRA  233 (279)
T KOG2462|consen  160 KAFSCK--YCGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRA  233 (279)
T ss_pred             ccccCC--CCCceeeehHHHhhHhhccC--CCccccc--ccccccchHHhhcccccccCCCCccCCcccchhcchHHHHH
Confidence            568899  99999999999999999996  6799999  99999999999999999999999999999999999999999


Q ss_pred             HHHhhcCcCCCCCCCCCcchhhhHHhhhhcC
Q psy6598          82 HKKTNHRESKNKKPSNRNNIVKQECVQKINS  112 (154)
Q Consensus        82 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (154)
                      ||++|...+++.+..+.+.+....-+.++..
T Consensus       234 HmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  234 HMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             HHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            9999999999999999998887766666544

>KOG2462|consensus

Probab=99.89  E-value=3.8e-24  Score=147.30  Aligned_cols=79  Identities=34%  Similarity=0.640  Sum_probs=76.7

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVH   82 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   82 (154)
                      ++.|.  +|||.|...+.|+.|+|+|+|+|||.|..  |+++|..++.|+.|+++|.+.|+|+|..|+|.|.+.+.|.+|
T Consensus       187 ~c~C~--iCGKaFSRPWLLQGHiRTHTGEKPF~C~h--C~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH  262 (279)
T KOG2462|consen  187 PCECG--ICGKAFSRPWLLQGHIRTHTGEKPFSCPH--CGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKH  262 (279)
T ss_pred             Ccccc--cccccccchHHhhcccccccCCCCccCCc--ccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHh
Confidence            67899  99999999999999999999999999988  999999999999999999999999999999999999999999


Q ss_pred             HHh
Q psy6598          83 KKT   85 (154)
Q Consensus        83 ~~~   85 (154)
                      ...
T Consensus       263 ~ES  265 (279)
T KOG2462|consen  263 SES  265 (279)
T ss_pred             hhh
Confidence            875

>KOG3576|consensus

Probab=99.76  E-value=1.2e-19  Score=120.15  Aligned_cols=84  Identities=30%  Similarity=0.604  Sum_probs=80.6

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVH   82 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   82 (154)
                      .|.|.  +|+|.|.-...|.+|++.|...+.|.|..  ||++|...-.|.+|+++|+|.+||+|..|+|.|.+.-+|..|
T Consensus       117 ~ftCr--vCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcslesh  192 (267)
T KOG3576|consen  117 SFTCR--VCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESH  192 (267)
T ss_pred             eeeee--hhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHH
Confidence            58999  99999999999999999999999999999  999999999999999999999999999999999999999999


Q ss_pred             HHhhcCcC
Q psy6598          83 KKTNHRES   90 (154)
Q Consensus        83 ~~~~~~~~   90 (154)
                      ++..|+..
T Consensus       193 l~kvhgv~  200 (267)
T KOG3576|consen  193 LKKVHGVQ  200 (267)
T ss_pred             HHHHcCch
Confidence            99888754

>KOG3623|consensus

Probab=99.74  E-value=3.3e-19  Score=136.37  Aligned_cols=79  Identities=28%  Similarity=0.636  Sum_probs=76.7

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHH
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNV   81 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   81 (154)
                      -+|-|+  .|+|+|...+.|.+|.--|+|.+||.|.+  |.|+|..+-+|..|.|.|.|+|||+|+.|+|+|+...++.+
T Consensus       893 gmyaCD--qCDK~FqKqSSLaRHKYEHsGqRPyqC~i--CkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQ  968 (1007)
T KOG3623|consen  893 GMYACD--QCDKAFQKQSSLARHKYEHSGQRPYQCII--CKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQ  968 (1007)
T ss_pred             ccchHH--HHHHHHHhhHHHHHhhhhhcCCCCcccch--hhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHh
Confidence            368999  99999999999999999999999999999  99999999999999999999999999999999999999999


Q ss_pred             HHH
Q psy6598          82 HKK   84 (154)
Q Consensus        82 H~~   84 (154)
                      ||.
T Consensus       969 HMN  971 (1007)
T KOG3623|consen  969 HMN  971 (1007)
T ss_pred             hhc
Confidence            986

>KOG1074|consensus

Probab=99.58  E-value=3.1e-16  Score=121.80  Aligned_cols=52  Identities=33%  Similarity=0.603  Sum_probs=46.4

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhh
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH   58 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   58 (154)
                      +++|.  .|.++|.+.+.|+.|+|.|+|++||+|.+  ||..|.++..|..|...|
T Consensus       353 khkCr--~CakvfgS~SaLqiHlRSHTGERPfqCnv--CG~~FSTkGNLKvH~~rH  404 (958)
T KOG1074|consen  353 KHKCR--FCAKVFGSDSALQIHLRSHTGERPFQCNV--CGNRFSTKGNLKVHFQRH  404 (958)
T ss_pred             cchhh--hhHhhcCchhhhhhhhhccCCCCCeeecc--cccccccccceeeeeeec
Confidence            46799  99999999999999999999999999998  999999999998887665

>KOG3623|consensus

Probab=99.51  E-value=5.2e-15  Score=113.78  Aligned_cols=78  Identities=27%  Similarity=0.571  Sum_probs=59.4

Q ss_pred             eecccccccccccCHHHHHHHHHHhcC-------------CCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCc
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHSG-------------EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP   70 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   70 (154)
                      |.|.  .|..+|.+...|.+|+..|..             .+.|+|..  |||+|..+-+|..|+|+|.|+|||.|+-|+
T Consensus       241 fsC~--lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtE--CgKAFKfKHHLKEHlRIHSGEKPfeCpnCk  316 (1007)
T KOG3623|consen  241 FSCM--LCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTE--CGKAFKFKHHLKEHLRIHSGEKPFECPNCK  316 (1007)
T ss_pred             Ccch--hhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccc--cchhhhhHHHHHhhheeecCCCCcCCcccc
Confidence            6677  788888888888888777742             25578866  888888888888888888888888888888


Q ss_pred             ccccCchhHHHHHHh
Q psy6598          71 RSYRQLCTLNVHKKT   85 (154)
Q Consensus        71 ~~f~~~~~l~~H~~~   85 (154)
                      |+|+...++..||..
T Consensus       317 KRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  317 KRFSHSGSYSSHMSS  331 (1007)
T ss_pred             cccccCCcccccccc
Confidence            888888777777654

>KOG3576|consensus

Probab=99.48  E-value=1.5e-14  Score=96.06  Aligned_cols=85  Identities=29%  Similarity=0.555  Sum_probs=76.1

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhh-hc----------CCCceeCCCCc
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLV-HS----------DIRPFICDRCP   70 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~----------~~~~~~C~~C~   70 (154)
                      |.|-|.  .||+.|.+.-.|++|+++|+|.+||+|..  |+++|+.+..|..|.+. |.          ..|.|.|..||
T Consensus       144 kr~lct--~cgkgfndtfdlkrh~rthtgvrpykc~~--c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg  219 (267)
T KOG3576|consen  144 KRHLCT--FCGKGFNDTFDLKRHTRTHTGVRPYKCSL--CEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCG  219 (267)
T ss_pred             HHHHHh--hccCcccchhhhhhhhccccCccccchhh--hhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccC
Confidence            457799  99999999999999999999999999999  99999999999999873 42          24779999999


Q ss_pred             ccccCchhHHHHHHhhcCcC
Q psy6598          71 RSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        71 ~~f~~~~~l~~H~~~~~~~~   90 (154)
                      .+-.....+..|+..||...
T Consensus       220 ~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  220 YTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             CCCCChhHHHHHHHhcCCCC
Confidence            99999999999999987653

>PHA00733 hypothetical protein

Probab=99.40  E-value=2.2e-13  Score=86.45  Aligned_cols=83  Identities=19%  Similarity=0.297  Sum_probs=70.7

Q ss_pred             CCCeecccccccccccCHHHHHHH--HH---HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNH--MR---IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQ   75 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   75 (154)
                      +|++.|.  .|++.|.....|..+  ++   .+.+.++|.|..  |++.|.....|..|++.|  ..+|.|..|++.|..
T Consensus        38 ~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~  111 (128)
T PHA00733         38 QKRLIRA--VVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPL--CLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRN  111 (128)
T ss_pred             hhhHHHH--HHhhhccChhhhcchHHHHhhcccCCCCCccCCC--CCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCC
Confidence            3678899  999998888777665  22   234578999988  999999999999999977  457999999999999


Q ss_pred             chhHHHHHHhhcCc
Q psy6598          76 LCTLNVHKKTNHRE   89 (154)
Q Consensus        76 ~~~l~~H~~~~~~~   89 (154)
                      ...|..|+...|+.
T Consensus       112 ~~sL~~H~~~~h~~  125 (128)
T PHA00733        112 TDSTLDHVCKKHNI  125 (128)
T ss_pred             HHHHHHHHHHhcCc
Confidence            99999999988764

>KOG1074|consensus

Probab=99.35  E-value=2.1e-13  Score=106.33  Aligned_cols=85  Identities=26%  Similarity=0.529  Sum_probs=77.4

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCC----CceeCC---CCcccccC
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI----RPFICD---RCPRSYRQ   75 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~---~C~~~f~~   75 (154)
                      |-+|.  .|-++..-.+.|+.|++.|+|+|||+|.+  ||++|+++..|+.|+-+|...    .+|.|+   +|-+.|..
T Consensus       605 PNqCi--iC~rVlSC~saLqmHyrtHtGERPFkCKi--CgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn  680 (958)
T KOG1074|consen  605 PNQCI--ICLRVLSCPSALQMHYRTHTGERPFKCKI--CGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTN  680 (958)
T ss_pred             cccee--eeeecccchhhhhhhhhcccCcCcccccc--ccchhccccchhhcccccccCccccccccCCchhhhcccccc
Confidence            45799  99999999999999999999999999999  999999999999999988643    458999   99999999


Q ss_pred             chhHHHHHHhhcCcCC
Q psy6598          76 LCTLNVHKKTNHRESK   91 (154)
Q Consensus        76 ~~~l~~H~~~~~~~~~   91 (154)
                      .-.|..|++.|.+...
T Consensus       681 ~V~lpQhIriH~~~~~  696 (958)
T KOG1074|consen  681 AVTLPQHIRIHLGGQI  696 (958)
T ss_pred             cccccceEEeecCCCC
Confidence            9999999999985543

>KOG3608|consensus

Probab=99.29  E-value=2.2e-12  Score=92.32  Aligned_cols=79  Identities=32%  Similarity=0.565  Sum_probs=47.8

Q ss_pred             eecccccccccccCHHHHHHHHH-HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC--CcccccCchhHH
Q psy6598           4 FFYFPWDCKISFASATNYKNHMR-IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR--CPRSYRQLCTLN   80 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~   80 (154)
                      |+|+  .|+.+....+.|.+|++ .|..++||+|+.  |.+.|.+.+.|.+|...|. +.-|.|..  |...|.+...|.
T Consensus       264 ykCp--lCdmtc~~~ssL~~H~r~rHs~dkpfKCd~--Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~  338 (467)
T KOG3608|consen  264 YKCP--LCDMTCSSASSLTTHIRYRHSKDKPFKCDE--CDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMR  338 (467)
T ss_pred             cccc--ccccCCCChHHHHHHHHhhhccCCCccccc--hhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHH
Confidence            5555  55555555555666655 355566666665  6666666666666666555 34466655  666666666666


Q ss_pred             HHHHhhc
Q psy6598          81 VHKKTNH   87 (154)
Q Consensus        81 ~H~~~~~   87 (154)
                      +|++.+|
T Consensus       339 ~H~~evh  345 (467)
T KOG3608|consen  339 RHFLEVH  345 (467)
T ss_pred             HHHHHhc
Confidence            6666655

>KOG3608|consensus

Probab=99.24  E-value=1.2e-11  Score=88.67  Aligned_cols=88  Identities=23%  Similarity=0.448  Sum_probs=79.4

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhc-C--CCceeCCCCcccccCch
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS-D--IRPFICDRCPRSYRQLC   77 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-~--~~~~~C~~C~~~f~~~~   77 (154)
                      .|||+|+  .|++.|...+.|..|...|. +..|.|..++|...|.....+++|++.+. |  +.+|.|-.|.+.|.+..
T Consensus       290 dkpfKCd--~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~  366 (467)
T KOG3608|consen  290 DKPFKCD--ECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGK  366 (467)
T ss_pred             CCCcccc--chhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccch
Confidence            4899999  99999999999999999998 67899999999999999999999998644 4  46799999999999999


Q ss_pred             hHHHHHHhhcCcCC
Q psy6598          78 TLNVHKKTNHRESK   91 (154)
Q Consensus        78 ~l~~H~~~~~~~~~   91 (154)
                      +|..|++..|+-+.
T Consensus       367 ~L~~HL~kkH~f~~  380 (467)
T KOG3608|consen  367 SLSAHLMKKHGFRL  380 (467)
T ss_pred             hHHHHHHHhhcccC
Confidence            99999998776543

>PHA02768 hypothetical protein; Provisional

Probab=99.19  E-value=9e-12  Score=66.29  Aligned_cols=42  Identities=19%  Similarity=0.411  Sum_probs=25.5

Q ss_pred             eeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhH
Q psy6598          34 YVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTL   79 (154)
Q Consensus        34 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   79 (154)
                      |.|+.  ||+.|...+.|.+|+++|+  ++|+|..|++.|.+.+.|
T Consensus         6 y~C~~--CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPI--CGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcch--hCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            55655  6666666666666666665  456666666666655444

>PHA02768 hypothetical protein; Provisional

Probab=99.09  E-value=5.2e-11  Score=63.39  Aligned_cols=44  Identities=11%  Similarity=0.156  Sum_probs=39.6

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLY   52 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   52 (154)
                      .|.|+  .||+.|...+.|..|+++|+  ++|+|..  |++.|...+.|.
T Consensus         5 ~y~C~--~CGK~Fs~~~~L~~H~r~H~--k~~kc~~--C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECP--ICGEIYIKRKSMITHLRKHN--TNLKLSN--CKRISLRTGEYI   48 (55)
T ss_pred             ccCcc--hhCCeeccHHHHHHHHHhcC--CcccCCc--ccceecccceeE
Confidence            48999  99999999999999999998  6899977  999999877664

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.06  E-value=4e-10  Score=86.67  Aligned_cols=92  Identities=16%  Similarity=0.338  Sum_probs=75.4

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccC-----
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQ-----   75 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~-----   75 (154)
                      ++.+.|+  .|++.|. ...|..|+..|+  +++.|.   ||+.+ .+..|..|+.+|.+.+++.|.+|++.|..     
T Consensus       451 ~~H~~C~--~Cgk~f~-~s~LekH~~~~H--kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~  521 (567)
T PLN03086        451 KNHVHCE--KCGQAFQ-QGEMEKHMKVFH--EPLQCP---CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAM  521 (567)
T ss_pred             ccCccCC--CCCCccc-hHHHHHHHHhcC--CCccCC---CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCcccc
Confidence            3567899  9999995 688999999875  789994   99755 66899999999999999999999999952     


Q ss_pred             -----chhHHHHHHhhcCcCCCCCCCCCcchh
Q psy6598          76 -----LCTLNVHKKTNHRESKNKKPSNRNNIV  102 (154)
Q Consensus        76 -----~~~l~~H~~~~~~~~~~~~~~~~~~~~  102 (154)
                           ...|..|+..+ +.+...|..|...+.
T Consensus       522 d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vr  552 (567)
T PLN03086        522 DVRDRLRGMSEHESIC-GSRTAPCDSCGRSVM  552 (567)
T ss_pred             chhhhhhhHHHHHHhc-CCcceEccccCCeee
Confidence                 35799999884 777777776665443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=99.03  E-value=2.1e-10  Score=52.44  Aligned_cols=24  Identities=29%  Similarity=0.764  Sum_probs=12.6

Q ss_pred             HHHHhhhhcCCCceeCCCCccccc
Q psy6598          51 LYKHTLVHSDIRPFICDRCPRSYR   74 (154)
Q Consensus        51 l~~H~~~h~~~~~~~C~~C~~~f~   74 (154)
                      |.+|+++|++++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            445555555555555555555553

...

>KOG3993|consensus

Probab=98.90  E-value=7.8e-10  Score=81.04  Aligned_cols=86  Identities=24%  Similarity=0.400  Sum_probs=71.8

Q ss_pred             eecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcC-----------------------
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD-----------------------   60 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------------------   60 (154)
                      |.|.  .|...|.+.-.|.+|.-...-..-|+|..  |+|.|....+|..|.|+|..                       
T Consensus       268 yiCq--LCK~kYeD~F~LAQHrC~RIV~vEYrCPE--C~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~  343 (500)
T KOG3993|consen  268 YICQ--LCKEKYEDAFALAQHRCPRIVHVEYRCPE--CDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQ  343 (500)
T ss_pred             HHHH--HHHHhhhhHHHHhhccCCeeEEeeecCCc--ccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhh
Confidence            7899  99999999999999965433334599976  99999999999999999931                       


Q ss_pred             ----------CCceeCCCCcccccCchhHHHHHHhhcCcCCCC
Q psy6598          61 ----------IRPFICDRCPRSYRQLCTLNVHKKTNHRESKNK   93 (154)
Q Consensus        61 ----------~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~   93 (154)
                                +-.|.|..|+|.|.+...|++|+.+|+......
T Consensus       344 ea~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k  386 (500)
T KOG3993|consen  344 EAERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAK  386 (500)
T ss_pred             hccccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccch
Confidence                      123999999999999999999999988665444

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.88  E-value=2.2e-09  Score=49.03  Aligned_cols=26  Identities=54%  Similarity=1.138  Sum_probs=23.8

Q ss_pred             HHHHHHHHhcCCCceeecccccCcccCC
Q psy6598          20 NYKNHMRIHSGEKPYVCQVRDCQKRFTE   47 (154)
Q Consensus        20 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~   47 (154)
                      +|.+|++.|+|++||.|..  |++.|..
T Consensus         1 ~l~~H~~~H~~~k~~~C~~--C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPY--CGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESS--SSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCC--CcCeeCc
Confidence            5899999999999999988  9999964

...

>PHA00733 hypothetical protein

Probab=98.82  E-value=6e-09  Score=66.19  Aligned_cols=54  Identities=30%  Similarity=0.585  Sum_probs=47.9

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      ++||.|.  .||+.|.+...|..|++.|  ..+|.|..  |++.|.....|..|+...++
T Consensus        71 ~kPy~C~--~Cgk~Fss~s~L~~H~r~h--~~~~~C~~--CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         71 VSPYVCP--LCLMPFSSSVSLKQHIRYT--EHSKVCPV--CGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCccCC--CCCCcCCCHHHHHHHHhcC--CcCccCCC--CCCccCCHHHHHHHHHHhcC
Confidence            3689999  9999999999999999987  35799988  99999999999999886543

>PHA00616 hypothetical protein

Probab=98.76  E-value=4.5e-09  Score=53.36  Aligned_cols=34  Identities=9%  Similarity=0.127  Sum_probs=28.6

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      ||+|.  .||+.|..++.|..|++.|+|++++.|++
T Consensus         1 pYqC~--~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCL--RCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccc--hhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            68888  88888888888888888888888888764

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.72  E-value=2.6e-08  Score=76.86  Aligned_cols=79  Identities=18%  Similarity=0.379  Sum_probs=65.9

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCC----------hhhHHHHhhhhcCCCceeCCCCcc
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTE----------YSSLYKHTLVHSDIRPFICDRCPR   71 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~----------~~~l~~H~~~h~~~~~~~C~~C~~   71 (154)
                      +++.|+   ||+.+ ....|..|+..|.+.+++.|.+  |++.|..          ...|..|...+ |.+++.|..||+
T Consensus       477 kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kpi~C~f--C~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk  549 (567)
T PLN03086        477 EPLQCP---CGVVL-EKEQMVQHQASTCPLRLITCRF--CGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGR  549 (567)
T ss_pred             CCccCC---CCCCc-chhHHHhhhhccCCCCceeCCC--CCCccccCccccchhhhhhhHHHHHHhc-CCcceEccccCC
Confidence            577886   99755 6789999999999999999998  9999852          35799998885 899999999999


Q ss_pred             cccCchhHHHHHHhhcC
Q psy6598          72 SYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        72 ~f~~~~~l~~H~~~~~~   88 (154)
                      .|..+ .|..|+...|.
T Consensus       550 ~Vrlr-dm~~H~~~~h~  565 (567)
T PLN03086        550 SVMLK-EMDIHQIAVHQ  565 (567)
T ss_pred             eeeeh-hHHHHHHHhhc
Confidence            87655 57888877664

>PHA00732 hypothetical protein

Probab=98.53  E-value=6.4e-08  Score=56.16  Aligned_cols=48  Identities=27%  Similarity=0.406  Sum_probs=39.1

Q ss_pred             CeecccccccccccCHHHHHHHHHH-hcCCCceeecccccCcccCChhhHHHHhhhhcC
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRI-HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      ||.|.  .||+.|.+...|..|++. |.+   +.|..  |++.|.   .|..|.+++..
T Consensus         1 py~C~--~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~--CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCP--ICGFTTVTLFALKQHARRNHTL---TKCPV--CNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCC--CCCCccCCHHHHHHHhhcccCC---CccCC--CCCEeC---ChhhhhcccCC
Confidence            68899  999999999999999984 653   57987  999998   47888876543

>KOG3993|consensus

Probab=98.49  E-value=8.2e-08  Score=70.70  Aligned_cols=52  Identities=29%  Similarity=0.578  Sum_probs=45.9

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcC--------CC-------------------------ceeecccccCcccCChh
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSG--------EK-------------------------PYVCQVRDCQKRFTEYS   49 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------~~-------------------------~~~C~~~~C~~~f~~~~   49 (154)
                      -|+|.  .|+|+|.-..+|..|+|.|..        ..                         .|.|..  |++.|.+..
T Consensus       295 EYrCP--EC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C~~--C~KkFrRqA  370 (500)
T KOG3993|consen  295 EYRCP--ECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSCHT--CGKKFRRQA  370 (500)
T ss_pred             eecCC--cccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeecHH--hhhhhHHHH
Confidence            38999  999999999999999999942        11                         289998  999999999


Q ss_pred             hHHHHhhhh
Q psy6598          50 SLYKHTLVH   58 (154)
Q Consensus        50 ~l~~H~~~h   58 (154)
                      .|+.|+.+|
T Consensus       371 YLrKHqlth  379 (500)
T KOG3993|consen  371 YLRKHQLTH  379 (500)
T ss_pred             HHHHhHHhh
Confidence            999998877

>PHA00732 hypothetical protein

Probab=98.46  E-value=1.6e-07  Score=54.49  Aligned_cols=46  Identities=28%  Similarity=0.501  Sum_probs=39.1

Q ss_pred             ceeecccccCcccCChhhHHHHhhh-hcCCCceeCCCCcccccCchhHHHHHHhh
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLV-HSDIRPFICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      ||.|..  |++.|.....|..|++. |.+   +.|+.|++.|.   .|..|.++.
T Consensus         1 py~C~~--Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPI--CGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCC--CCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---Chhhhhccc
Confidence            588988  99999999999999984 653   68999999998   588888653

>PHA00616 hypothetical protein

Probab=98.44  E-value=7.1e-08  Score=48.99  Aligned_cols=34  Identities=18%  Similarity=0.314  Sum_probs=23.3

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      ||.|..  ||+.|..+..|.+|++.|++++++.|+.
T Consensus         1 pYqC~~--CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLR--CGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccch--hhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            466755  7777777777777777777777776654

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.34  E-value=3.7e-07  Score=40.28  Aligned_cols=22  Identities=23%  Similarity=0.602  Sum_probs=15.1

Q ss_pred             eeCCCCcccccCchhHHHHHHh
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      |.|+.|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            5666777777777777777665

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.29  E-value=2.6e-07  Score=65.84  Aligned_cols=54  Identities=35%  Similarity=0.818  Sum_probs=44.8

Q ss_pred             CCceeecccccCcccCChhhHHHHhhh-h------------------cCCCceeCCCCcccccCchhHHHHHH
Q psy6598          31 EKPYVCQVRDCQKRFTEYSSLYKHTLV-H------------------SDIRPFICDRCPRSYRQLCTLNVHKK   84 (154)
Q Consensus        31 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-h------------------~~~~~~~C~~C~~~f~~~~~l~~H~~   84 (154)
                      +|||+|.+++|.|.|+....|.-|+.- |                  ...|||.|.+|+|.|+..-.|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            488999888999999988888888762 3                  12489999999999999999988865

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.25  E-value=1.1e-06  Score=38.75  Aligned_cols=23  Identities=43%  Similarity=0.602  Sum_probs=17.0

Q ss_pred             eecccccccccccCHHHHHHHHHHh
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      |+|+  .|++.|.+...|..|++.|
T Consensus         1 y~C~--~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCP--ICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEET--TTTEEESSHHHHHHHHHHH
T ss_pred             CCCC--CCCCccCCHHHHHHHHhHC
Confidence            5677  7777777777777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.23  E-value=2.2e-06  Score=46.22  Aligned_cols=49  Identities=27%  Similarity=0.442  Sum_probs=24.4

Q ss_pred             eeecccccCcccCChhhHHHHhhh-hcC-CCceeCCCCcccccCchhHHHHHHhhc
Q psy6598          34 YVCQVRDCQKRFTEYSSLYKHTLV-HSD-IRPFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        34 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      |.|.+  |++ ......|..|... |.. .+.+.|++|...+.  .+|..|+..+|
T Consensus         3 f~CP~--C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPY--CGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCC--CCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            45555  555 3334455555442 332 23455666655433  35666665554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.21  E-value=1.2e-06  Score=38.77  Aligned_cols=24  Identities=38%  Similarity=0.778  Sum_probs=16.0

Q ss_pred             eeCCCCcccccCchhHHHHHHhhc
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      |.|++|++.|.....|..|++++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777777664

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.11  E-value=1.8e-06  Score=39.63  Aligned_cols=25  Identities=36%  Similarity=0.907  Sum_probs=17.3

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhc
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      ||.|..|++.|.....|..|++.|+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4667777777777777777776654

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.05  E-value=3.3e-06  Score=51.10  Aligned_cols=74  Identities=23%  Similarity=0.348  Sum_probs=22.4

Q ss_pred             ecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHH
Q psy6598           5 FYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKK   84 (154)
Q Consensus         5 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   84 (154)
                      +|.  .|+..|.+...|..|+...++-..-      ....+.....+..+.+.-. ...+.|..|++.|.....|..||+
T Consensus         1 ~C~--~C~~~f~~~~~l~~H~~~~H~~~~~------~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen    1 QCL--FCDESFSSVDDLLQHMKKKHGFDIP------DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMR   71 (100)
T ss_dssp             ---------------------------------------------------------SSEEBSSSS-EESSHHHHHHHHH
T ss_pred             Ccc--ccccccccccccccccccccccccc------ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHc
Confidence            488  9999999999999999754432211      1122233444444443221 226999999999999999999999


Q ss_pred             hhc
Q psy6598          85 TNH   87 (154)
Q Consensus        85 ~~~   87 (154)
                      .++
T Consensus        72 ~~~   74 (100)
T PF12756_consen   72 SKH   74 (100)
T ss_dssp             HTT
T ss_pred             Ccc
Confidence            753

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.00  E-value=1.2e-05  Score=43.22  Aligned_cols=50  Identities=28%  Similarity=0.418  Sum_probs=39.8

Q ss_pred             CeecccccccccccCHHHHHHHHH-HhcCC-CceeecccccCcccCChhhHHHHhhhhc
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMR-IHSGE-KPYVCQVRDCQKRFTEYSSLYKHTLVHS   59 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~   59 (154)
                      .|.|+  +|++ ..+...|..|.. .|..+ +.+.|.+  |...+.  ..|.+|+..+.
T Consensus         2 ~f~CP--~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCP--YCGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCC--CCCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            58999  9999 667889999977 46553 5799988  998655  48999988654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.90  E-value=1e-05  Score=37.04  Aligned_cols=25  Identities=32%  Similarity=0.610  Sum_probs=16.8

Q ss_pred             CeecccccccccccCHHHHHHHHHHhc
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      +|+|.  .|++.|.+...|..|++.|.
T Consensus         1 ~~~C~--~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECD--ECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEET--TTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCC--ccCCccCChhHHHHHhHHhc
Confidence            46677  77777777777777766553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.86  E-value=4.7e-06  Score=59.64  Aligned_cols=54  Identities=31%  Similarity=0.575  Sum_probs=46.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHH-Hhc------------------CCCceeecccccCcccCChhhHHHHhh
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMR-IHS------------------GEKPYVCQVRDCQKRFTEYSSLYKHTL   56 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~------------------~~~~~~C~~~~C~~~f~~~~~l~~H~~   56 (154)
                      +|||+|+-..|.|+|+....|+.|+. -|.                  ..|||.|.+  |+|.|+....|.-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCev--C~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEV--CDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccc--cchhhccCccceeccc
Confidence            58999998899999999999999976 341                  248999999  9999999999988864

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.86  E-value=1.8e-05  Score=34.86  Aligned_cols=23  Identities=39%  Similarity=0.598  Sum_probs=14.7

Q ss_pred             eecccccccccccCHHHHHHHHHHh
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      |.|+  .|++.|.+...|..|++.|
T Consensus         1 ~~C~--~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCP--ICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-S--STS-EESSHHHHHHHHHHH
T ss_pred             CCCc--CCCCcCCcHHHHHHHHHhh
Confidence            5677  7777777777777777654

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.63  E-value=4.8e-05  Score=39.59  Aligned_cols=40  Identities=23%  Similarity=0.277  Sum_probs=23.5

Q ss_pred             HHHhhh-hcCCCceeCCCCcccccCchhHHHHHHhhcCcCC
Q psy6598          52 YKHTLV-HSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESK   91 (154)
Q Consensus        52 ~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   91 (154)
                      ..+.+. +..+.|-.|++|+..+.+..+|.+|+.+.|+.++
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            334433 3456788999999999999999999988887654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=97.45  E-value=0.00011  Score=32.68  Aligned_cols=23  Identities=22%  Similarity=0.667  Sum_probs=13.9

Q ss_pred             eeCCCCcccccCchhHHHHHHhh
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      |.|..|++.|.....|..|++.|
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHh
Confidence            35666666666666666666543

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.37  E-value=0.00026  Score=36.89  Aligned_cols=33  Identities=21%  Similarity=0.495  Sum_probs=20.3

Q ss_pred             cCCCceeecccccCcccCChhhHHHHhhhhcCCCc
Q psy6598          29 SGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRP   63 (154)
Q Consensus        29 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   63 (154)
                      ..+.|..|.+  |+..+.....|.+|+..+++.||
T Consensus        20 ~S~~PatCP~--C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCPI--CGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-TT--T--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCCc--chhhccchhhHHHHHHHHhcccC
Confidence            3456788877  88888888888888877666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.36  E-value=0.00018  Score=31.82  Aligned_cols=23  Identities=30%  Similarity=0.580  Sum_probs=14.4

Q ss_pred             eeCCCCcccccCchhHHHHHHhhc
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      |+|+.|+.... ...|..|++.+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            56777776666 667777777665

>smart00355 ZnF_C2H2 zinc finger

Probab=97.33  E-value=0.00024  Score=31.55  Aligned_cols=24  Identities=33%  Similarity=0.588  Sum_probs=16.2

Q ss_pred             eecccccccccccCHHHHHHHHHHhc
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      |.|.  .|++.|.....|..|++.|.
T Consensus         1 ~~C~--~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCP--ECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCC--CCcchhCCHHHHHHHHHHhc
Confidence            4566  77777777777777766553

>PRK04860 hypothetical protein; Provisional

Probab=97.22  E-value=0.00026  Score=46.72  Aligned_cols=39  Identities=26%  Similarity=0.554  Sum_probs=32.9

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCch
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLC   77 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   77 (154)
                      +|.|.   |+.   ....+.+|.++|+++++|.|..|+..|....
T Consensus       119 ~Y~C~---C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        119 PYRCK---CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEcC---CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            58885   886   6778899999999999999999999887653

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.16  E-value=0.00029  Score=31.39  Aligned_cols=22  Identities=32%  Similarity=0.735  Sum_probs=13.9

Q ss_pred             eeCCCCcccccCchhHHHHHHh
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      |.|.+|++.|.....|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666654

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.07  E-value=0.0005  Score=30.58  Aligned_cols=22  Identities=32%  Similarity=0.644  Sum_probs=14.3

Q ss_pred             eecccccccccccCHHHHHHHHHH
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      |.|.  .|++.|.+...|..|++.
T Consensus         1 ~~C~--~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCD--ICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEET--TTTEEESSHHHHHHHHTT
T ss_pred             CCCC--CCCCCcCCHHHHHHHHCc
Confidence            4566  666666666666666654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.86  E-value=0.0013  Score=28.95  Aligned_cols=23  Identities=26%  Similarity=0.482  Sum_probs=14.3

Q ss_pred             eecccccccccccCHHHHHHHHHHhc
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      |+|.  .|+.... ...|..|++.|.
T Consensus         1 y~C~--~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCP--HCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-S--SSS-EES-HHHHHHHHHHHH
T ss_pred             CCCC--CCCCcCC-HHHHHHHHHhhC
Confidence            5677  7776666 667777776653

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.52  E-value=0.00069  Score=30.82  Aligned_cols=22  Identities=32%  Similarity=0.706  Sum_probs=13.3

Q ss_pred             eeCCCCcccccCchhHHHHHHh
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      |.|..|++.|.....|..|++.
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566666666666666666543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=96.28  E-value=0.0035  Score=27.97  Aligned_cols=21  Identities=29%  Similarity=0.536  Sum_probs=14.6

Q ss_pred             eeCCCCcccccCchhHHHHHHh
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      ..|+.||+.| ..+.|..|+..
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4677777777 56677777654

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.26  E-value=0.0011  Score=30.17  Aligned_cols=21  Identities=33%  Similarity=0.686  Sum_probs=13.9

Q ss_pred             eecccccccccccCHHHHHHHHH
Q psy6598           4 FFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      |.|.  .|++.|.+...|..|++
T Consensus         2 ~~C~--~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCD--ACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBT--TTTBBBSSHHHHHCCTT
T ss_pred             CCcc--cCCCCcCCHHHHHHHHc
Confidence            5566  66766666666666655

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.96  E-value=0.0018  Score=48.82  Aligned_cols=57  Identities=39%  Similarity=0.747  Sum_probs=26.8

Q ss_pred             cccccccCHHHHHHHHH--HhcCC--CceeecccccCcccCChhhHHHHhhhhcCCCceeC
Q psy6598          10 DCKISFASATNYKNHMR--IHSGE--KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC   66 (154)
Q Consensus        10 ~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   66 (154)
                      .|...|.....|.+|.+  .|.++  +++.|.+..|++.|.....+.+|...|.+..++.+
T Consensus       294 ~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  354 (467)
T COG5048         294 QCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE  354 (467)
T ss_pred             cccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccc
Confidence            44445544444555544  44444  44544411155555555555555444444444444

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.50  E-value=0.055  Score=39.86  Aligned_cols=83  Identities=20%  Similarity=0.341  Sum_probs=60.3

Q ss_pred             ecccccccccccCHHHHHHHHHHhcCCCceeecccc--cCcccCChhhHHHHhhhhcCCCceeCCC--C--c--ccccCc
Q psy6598           5 FYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRD--CQKRFTEYSSLYKHTLVHSDIRPFICDR--C--P--RSYRQL   76 (154)
Q Consensus         5 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C--~--~~f~~~   76 (154)
                      .|.  .|.+.|-+...|..|++..+ ++.|.|+..+  -...|.....|.+|.+.-    -|.|.+  |  |  ..|...
T Consensus       222 ~C~--FC~~~FYdDDEL~~HcR~~H-E~ChICD~v~p~~~QYFK~Y~~Le~HF~~~----hy~ct~qtc~~~k~~vf~~~  294 (493)
T COG5236         222 LCI--FCKIYFYDDDELRRHCRLRH-EACHICDMVGPIRYQYFKSYEDLEAHFRNA----HYCCTFQTCRVGKCYVFPYH  294 (493)
T ss_pred             hhh--hccceecChHHHHHHHHhhh-hhhhhhhccCccchhhhhCHHHHHHHhhcC----ceEEEEEEEecCcEEEeccH
Confidence            488  99999999999999998543 5677776511  113688889999998732    266653  4  2  368889


Q ss_pred             hhHHHHHHhhcCcCCCCC
Q psy6598          77 CTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        77 ~~l~~H~~~~~~~~~~~~   94 (154)
                      ..|..|+-..|+......
T Consensus       295 ~el~~h~~~~h~~~~~~~  312 (493)
T COG5236         295 TELLEHLTRFHKVNARLS  312 (493)
T ss_pred             HHHHHHHHHHhhcccccC
Confidence            999999988887654443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.43  E-value=0.012  Score=28.26  Aligned_cols=23  Identities=22%  Similarity=0.534  Sum_probs=18.0

Q ss_pred             ceeCCCCcccccCchhHHHHHHh
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      +|.|.+|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47788888888888888888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.19  E-value=0.0066  Score=45.74  Aligned_cols=62  Identities=26%  Similarity=0.405  Sum_probs=55.3

Q ss_pred             CceeecccccCcccCChhhHHHHhh--hhcCC--CceeCC--CCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTL--VHSDI--RPFICD--RCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      .++.|..  |...|.....|.+|.+  .|.++  +++.|+  .|++.|.+...+..|...|.+.......
T Consensus       288 ~~~~~~~--~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  355 (467)
T COG5048         288 LPIKSKQ--CNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEK  355 (467)
T ss_pred             cCCCCcc--ccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccc
Confidence            3678877  9999999999999999  89999  999999  7999999999999999999887755443

>smart00451 ZnF_U1 U1-like zinc finger

Probab=95.03  E-value=0.021  Score=27.30  Aligned_cols=22  Identities=18%  Similarity=0.596  Sum_probs=15.5

Q ss_pred             CeecccccccccccCHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      +|.|+  .|++.|.+...+..|+.
T Consensus         3 ~~~C~--~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCK--LCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEcc--ccCCccCCHHHHHHHHC
Confidence            46677  77777777777777765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG1146|consensus

Probab=94.69  E-value=0.013  Score=49.77  Aligned_cols=75  Identities=20%  Similarity=0.325  Sum_probs=47.6

Q ss_pred             cccccccCHHHHHHHHH-HhcCCCceeecccccCcccCChhhHHHHhhh-h------------------------cCCCc
Q psy6598          10 DCKISFASATNYKNHMR-IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLV-H------------------------SDIRP   63 (154)
Q Consensus        10 ~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h------------------------~~~~~   63 (154)
                      .|+..+..+..+-.|+. .|.-.+.|+|..  |+..|+....|..|+|. |                        .+.++
T Consensus       441 ~~e~~~~s~r~~~~~t~~L~S~~kt~~cpk--c~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p  518 (1406)
T KOG1146|consen  441 KAEPLLESKRSLEGQTVVLHSFFKTLKCPK--CNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKP  518 (1406)
T ss_pred             chhhhhhhhcccccceeeeecccccccCCc--cchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCc
Confidence            34444444444444433 233345566644  66666666666666654 1                        23478


Q ss_pred             eeCCCCcccccCchhHHHHHHhh
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      |.|..|...+....+|..||+.-
T Consensus       519 ~~C~~C~~stttng~LsihlqS~  541 (1406)
T KOG1146|consen  519 YPCRACNYSTTTNGNLSIHLQSD  541 (1406)
T ss_pred             ccceeeeeeeecchHHHHHHHHH
Confidence            99999999999999999998853

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.54  E-value=0.04  Score=24.48  Aligned_cols=20  Identities=15%  Similarity=0.227  Sum_probs=14.0

Q ss_pred             eecccccccccccCHHHHHHHHH
Q psy6598           4 FFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      .+|.  .||+.| ....|..|+.
T Consensus         3 ~~C~--~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCP--ICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCC--CCCCEE-CHHHHHHHHH
Confidence            4577  888888 4566777765

>KOG2482|consensus

Probab=94.16  E-value=0.071  Score=39.20  Aligned_cols=23  Identities=26%  Similarity=0.434  Sum_probs=20.9

Q ss_pred             CeecccccccccccCHHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      .+.|-  .|.+.|..+..|..||+.
T Consensus       195 r~~CL--yCekifrdkntLkeHMrk  217 (423)
T KOG2482|consen  195 RLRCL--YCEKIFRDKNTLKEHMRK  217 (423)
T ss_pred             hheee--eeccccCCcHHHHHHHHh
Confidence            47899  999999999999999985

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.06  E-value=0.038  Score=40.66  Aligned_cols=27  Identities=19%  Similarity=0.252  Sum_probs=19.2

Q ss_pred             CeecccccccccccCHHHHHHHHHHhc
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      .|.|+...|..+......|..|.+..+
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H  177 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQH  177 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhc
Confidence            367777777777777777888877543

>KOG1146|consensus

Probab=93.81  E-value=0.016  Score=49.29  Aligned_cols=81  Identities=15%  Similarity=0.230  Sum_probs=58.0

Q ss_pred             eecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhh-----------------hcCCCceeC
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLV-----------------HSDIRPFIC   66 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-----------------h~~~~~~~C   66 (154)
                      +.|.  .|++.|.....+. |+..   ..+|.|..  |...|.....|..|.+.                 +....+| |
T Consensus      1261 ~~c~--~~~~~~~~~~~~~-~l~~---~~~~~~~~--~~~~~~~~~~l~~~~~k~~~~~~~~~~~~~~~l~~~d~~~~-c 1331 (1406)
T KOG1146|consen 1261 GECG--AVDELLTPSFGIS-TLDV---THRYLCRQ--CKMAFDGEAPLTAHQRKFCFAGRGSGGSMPPPLRVPDCTYH-C 1331 (1406)
T ss_pred             chhh--hccccccCcccee-eccc---chhHHHHH--HHhhhcchhHHHHHHHHHHhccCccccCCCCcccCcccccc-c
Confidence            5577  7777776666665 5443   34577877  88888888888877642                 2223456 9


Q ss_pred             CCCcccccCchhHHHHHHhhcCcCCCC
Q psy6598          67 DRCPRSYRQLCTLNVHKKTNHRESKNK   93 (154)
Q Consensus        67 ~~C~~~f~~~~~l~~H~~~~~~~~~~~   93 (154)
                      ..|...|.....|..||+..++..+..
T Consensus      1332 ~~c~~~~~~~~alqihm~~~~~~~kt~ 1358 (1406)
T KOG1146|consen 1332 LACEVLLSGREALQIHMRSSAHRRKTA 1358 (1406)
T ss_pred             hHHHhhcchhHHHHHHHHHhhhcccCC
Confidence            999999999999999999876655443

>KOG2893|consensus

Probab=93.72  E-value=0.021  Score=39.79  Aligned_cols=52  Identities=27%  Similarity=0.586  Sum_probs=34.6

Q ss_pred             CCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        31 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      .++| |=+  |++.|....-|.+|++    .|-|+|.+|.|..-+...|..|-...|++
T Consensus         9 ~kpw-cwy--cnrefddekiliqhqk----akhfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen    9 DKPW-CWY--CNREFDDEKILIQHQK----AKHFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             CCce-eee--cccccchhhhhhhhhh----hccceeeeehhhhccCCCceeehhhhhhh
Confidence            3455 545  7788888777777766    33488888877776777777775544444

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=93.59  E-value=0.21  Score=30.78  Aligned_cols=25  Identities=24%  Similarity=0.449  Sum_probs=23.4

Q ss_pred             eeC----CCCcccccCchhHHHHHHhhcC
Q psy6598          64 FIC----DRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        64 ~~C----~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      |.|    ..|+....+...+..|.+.+|+
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            999    9999999999999999999875

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2231|consensus

Probab=93.58  E-value=0.084  Score=42.40  Aligned_cols=13  Identities=62%  Similarity=0.825  Sum_probs=9.3

Q ss_pred             CHHHHHHHHH-Hhc
Q psy6598          17 SATNYKNHMR-IHS   29 (154)
Q Consensus        17 ~~~~l~~H~~-~h~   29 (154)
                      ....|+.|+. .|.
T Consensus       126 s~~~Lk~H~~~~H~  139 (669)
T KOG2231|consen  126 SVENLKNHMRDQHK  139 (669)
T ss_pred             HHHHHHHHHHHhhh
Confidence            6778888884 453

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.40  E-value=0.04  Score=29.33  Aligned_cols=33  Identities=18%  Similarity=0.228  Sum_probs=23.7

Q ss_pred             hcCCCceeCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          58 HSDIRPFICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        58 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      ..|+..+.|+-||..|.......+|....|+-.
T Consensus        12 RDGE~~lrCPRC~~~FR~~K~Y~RHVNKaH~~~   44 (65)
T COG4049          12 RDGEEFLRCPRCGMVFRRRKDYIRHVNKAHGWL   44 (65)
T ss_pred             cCCceeeeCCchhHHHHHhHHHHHHhhHHhhhh
Confidence            446667788888888888888888877665543

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=93.37  E-value=0.098  Score=31.17  Aligned_cols=20  Identities=30%  Similarity=0.610  Sum_probs=10.0

Q ss_pred             eecccccCcccCChhhHHHHhh
Q psy6598          35 VCQVRDCQKRFTEYSSLYKHTL   56 (154)
Q Consensus        35 ~C~~~~C~~~f~~~~~l~~H~~   56 (154)
                      .|.+  |++.|.+...|..|++
T Consensus        52 ~C~~--C~~~f~s~~~l~~Hm~   71 (100)
T PF12756_consen   52 RCPY--CNKTFRSREALQEHMR   71 (100)
T ss_dssp             EBSS--SS-EESSHHHHHHHHH
T ss_pred             CCCc--cCCCCcCHHHHHHHHc
Confidence            4544  5555555555555554

>KOG4173|consensus

Probab=92.93  E-value=0.065  Score=36.59  Aligned_cols=81  Identities=21%  Similarity=0.382  Sum_probs=61.1

Q ss_pred             eecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhh-hh---------cCCCceeCC--CCcc
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTL-VH---------SDIRPFICD--RCPR   71 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h---------~~~~~~~C~--~C~~   71 (154)
                      |-|+-..|...|........|...-++   -.|.+  |.+.|.+.-.|..|+. +|         .|.--|.|-  .|+-
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~---~sCs~--C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHG---NSCSF--CKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhccc---chhHH--HHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            557655777888888888888764333   25988  9999999999999976 34         233448885  4999


Q ss_pred             cccCchhHHHHHHhhcCc
Q psy6598          72 SYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        72 ~f~~~~~l~~H~~~~~~~   89 (154)
                      .|.+......||-..|.-
T Consensus       155 KFkT~r~RkdH~I~~Hk~  172 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHKY  172 (253)
T ss_pred             hhhhhhhhhhHHHHhccC
Confidence            999999999998887754

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=92.42  E-value=0.1  Score=24.78  Aligned_cols=10  Identities=30%  Similarity=1.059  Sum_probs=5.0

Q ss_pred             CceeCCCCcc
Q psy6598          62 RPFICDRCPR   71 (154)
Q Consensus        62 ~~~~C~~C~~   71 (154)
                      .++.|+.||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            3455555543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2231|consensus

Probab=92.04  E-value=0.21  Score=40.23  Aligned_cols=71  Identities=18%  Similarity=0.435  Sum_probs=49.0

Q ss_pred             ecccccccccccCHHHHHHHHHHhcCCCceeecc----cccCcccCChhhHHHHhhhhcCCCceeCC--CCc-ccccCch
Q psy6598           5 FYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV----RDCQKRFTEYSSLYKHTLVHSDIRPFICD--RCP-RSYRQLC   77 (154)
Q Consensus         5 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~----~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~-~~f~~~~   77 (154)
                      .|.  .|...|.....|.+|++.++    |.|.+    .+++..|.....|..|.+.++    |.|.  .|. +.|....
T Consensus       184 ~C~--~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~~~f~~~~  253 (669)
T KOG2231|consen  184 LCK--FCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRTKKFYVAF  253 (669)
T ss_pred             cch--hhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhcC----ccccccccccceeeehh
Confidence            377  89999999999999988654    44544    123456777788988888543    7787  564 4555555


Q ss_pred             hHHHHHHh
Q psy6598          78 TLNVHKKT   85 (154)
Q Consensus        78 ~l~~H~~~   85 (154)
                      .+..|++.
T Consensus       254 ~~ei~lk~  261 (669)
T KOG2231|consen  254 ELEIELKA  261 (669)
T ss_pred             HHHHHHHh
Confidence            66666663

>KOG2893|consensus

Probab=92.01  E-value=0.052  Score=37.94  Aligned_cols=45  Identities=27%  Similarity=0.614  Sum_probs=36.8

Q ss_pred             cccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhh-hh
Q psy6598           8 PWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTL-VH   58 (154)
Q Consensus         8 ~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h   58 (154)
                      +|+|++-|.+..-|..|++.    +-|+|.+  |-+...+-..|..|.. +|
T Consensus        13 cwycnrefddekiliqhqka----khfkchi--chkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHI--CHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeee--ehhhhccCCCceeehhhhh
Confidence            34999999999999999885    4489999  9998888888887754 44

>PRK04860 hypothetical protein; Provisional

Probab=91.03  E-value=0.2  Score=33.17  Aligned_cols=36  Identities=19%  Similarity=0.434  Sum_probs=30.7

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhcCcCCCCCCCCCcchh
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIV  102 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~  102 (154)
                      +|.|. |+.   ....+.+|.++|.++.++.+..|...+.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            69998 997   7788999999999999999988776543

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=90.74  E-value=0.3  Score=24.75  Aligned_cols=26  Identities=23%  Similarity=0.397  Sum_probs=14.0

Q ss_pred             CCCceeCCCCcccccCc----hhHHHHHHh
Q psy6598          60 DIRPFICDRCPRSYRQL----CTLNVHKKT   85 (154)
Q Consensus        60 ~~~~~~C~~C~~~f~~~----~~l~~H~~~   85 (154)
                      +.....|..|++.+...    ++|..|++.
T Consensus        13 ~~~~a~C~~C~~~~~~~~~~ts~l~~HL~~   42 (45)
T PF02892_consen   13 DKKKAKCKYCGKVIKYSSGGTSNLKRHLKK   42 (45)
T ss_dssp             CSS-EEETTTTEE-----SSTHHHHHHHHH
T ss_pred             CcCeEEeCCCCeEEeeCCCcHHHHHHhhhh
Confidence            34456777777776653    567777744

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>KOG4173|consensus

Probab=90.12  E-value=0.078  Score=36.20  Aligned_cols=53  Identities=25%  Similarity=0.500  Sum_probs=44.8

Q ss_pred             ecccccccccccCHHHHHHHHH-Hhc---------CCCceeecccccCcccCChhhHHHHhh-hhc
Q psy6598           5 FYFPWDCKISFASATNYKNHMR-IHS---------GEKPYVCQVRDCQKRFTEYSSLYKHTL-VHS   59 (154)
Q Consensus         5 ~C~~~~C~~~f~~~~~l~~H~~-~h~---------~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~   59 (154)
                      .|.  .|.+.|.+...|..|+. .|.         |...|.|-+++|+..|.+...-..|+- .|.
T Consensus       108 sCs--~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  108 SCS--FCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhH--HHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhcc
Confidence            688  99999999999999976 452         556799999999999999999889975 564

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=89.99  E-value=0.93  Score=27.85  Aligned_cols=25  Identities=20%  Similarity=0.288  Sum_probs=21.7

Q ss_pred             eee----cccccCcccCChhhHHHHhhhhcC
Q psy6598          34 YVC----QVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        34 ~~C----~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      |.|    ..  |+..+.+...+.+|.+.++|
T Consensus        81 ~~C~~~~~~--C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPH--CGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCC--CCcEeccHHHHHHHHHHhcC
Confidence            899    66  99999999999999987653

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2482|consensus

Probab=88.99  E-value=0.41  Score=35.37  Aligned_cols=81  Identities=25%  Similarity=0.428  Sum_probs=58.6

Q ss_pred             eeccccccccccc-CHHHHHHHHH-Hhc---C------------------CCceeecccccCcccCChhhHHHHhhh--h
Q psy6598           4 FFYFPWDCKISFA-SATNYKNHMR-IHS---G------------------EKPYVCQVRDCQKRFTEYSSLYKHTLV--H   58 (154)
Q Consensus         4 ~~C~~~~C~~~f~-~~~~l~~H~~-~h~---~------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~--h   58 (154)
                      .+|-  .|..-+. ..+..-.|+- .|.   |                  -..+.|-+  |.+.|..+..|+.||+.  |
T Consensus       145 lqCl--FCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLy--CekifrdkntLkeHMrkK~H  220 (423)
T KOG2482|consen  145 LQCL--FCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLY--CEKIFRDKNTLKEHMRKKRH  220 (423)
T ss_pred             eEEE--EecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeee--eccccCCcHHHHHHHHhccC
Confidence            4677  8876664 3455555643 342   1                  12388988  99999999999999983  5


Q ss_pred             cCCCc------------------------------------------------------eeCCCCcccccCchhHHHHHH
Q psy6598          59 SDIRP------------------------------------------------------FICDRCPRSYRQLCTLNVHKK   84 (154)
Q Consensus        59 ~~~~~------------------------------------------------------~~C~~C~~~f~~~~~l~~H~~   84 (154)
                      ....|                                                      ..|-+|....-....|..||+
T Consensus       221 rrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk  300 (423)
T KOG2482|consen  221 RRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMK  300 (423)
T ss_pred             cccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHH
Confidence            22111                                                      589999998888999999999


Q ss_pred             hhcC
Q psy6598          85 TNHR   88 (154)
Q Consensus        85 ~~~~   88 (154)
                      ..|.
T Consensus       301 ~vHe  304 (423)
T KOG2482|consen  301 IVHE  304 (423)
T ss_pred             HHHH
Confidence            8874

>smart00614 ZnF_BED BED zinc finger

Probab=88.58  E-value=0.43  Score=24.93  Aligned_cols=21  Identities=19%  Similarity=0.433  Sum_probs=13.6

Q ss_pred             eeCCCCcccccCc-----hhHHHHHH
Q psy6598          64 FICDRCPRSYRQL-----CTLNVHKK   84 (154)
Q Consensus        64 ~~C~~C~~~f~~~-----~~l~~H~~   84 (154)
                      -.|..|++.+...     ++|.+|++
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~   44 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLR   44 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHH
Confidence            5667777766554     46777766

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=86.64  E-value=0.46  Score=30.41  Aligned_cols=26  Identities=27%  Similarity=0.600  Sum_probs=16.6

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      .-..|-+||+.|..   |.+|++.|||..
T Consensus        71 d~i~clecGk~~k~---LkrHL~~~~glt   96 (132)
T PF05443_consen   71 DYIICLECGKKFKT---LKRHLRTHHGLT   96 (132)
T ss_dssp             S-EE-TBT--EESB---HHHHHHHTT-S-
T ss_pred             CeeEEccCCcccch---HHHHHHHccCCC
Confidence            34899999998865   599999998753

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>KOG2186|consensus

Probab=85.92  E-value=0.56  Score=33.18  Aligned_cols=47  Identities=26%  Similarity=0.362  Sum_probs=33.6

Q ss_pred             eecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhh
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLV   57 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   57 (154)
                      |.|.  .||...... .+.+|+..-.+ ..|.|.-  |++.|.. ..+..|..-
T Consensus         4 FtCn--vCgEsvKKp-~vekH~srCrn-~~fSCID--C~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    4 FTCN--VCGESVKKP-QVEKHMSRCRN-AYFSCID--CGKTFER-VSYKNHTKC   50 (276)
T ss_pred             Eehh--hhhhhcccc-chHHHHHhccC-CeeEEee--ccccccc-chhhhhhhh
Confidence            6788  888776544 46668776555 6688876  8888888 666777653

>KOG2785|consensus

Probab=85.70  E-value=1.2  Score=33.45  Aligned_cols=74  Identities=22%  Similarity=0.253  Sum_probs=47.7

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCc---ccccCchhH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP---RSYRQLCTL   79 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~---~~f~~~~~l   79 (154)
                      |-.|-  .|++.|.+...-..||..++|-  |.-+.    ...+....|..-+..-. ..-|.|-.|+   +.|.+..+.
T Consensus       166 Pt~CL--fC~~~~k~~e~~~~HM~~~Hgf--fIPdr----eYL~D~~GLl~YLgeKV-~~~~~CL~CN~~~~~f~sleav  236 (390)
T KOG2785|consen  166 PTDCL--FCDKKSKSLEENLKHMFKEHGF--FIPDR----EYLTDEKGLLKYLGEKV-GIGFICLFCNELGRPFSSLEAV  236 (390)
T ss_pred             Cccee--ecCCCcccHHHHHHHHhhccCC--cCCch----HhhhchhHHHHHHHHHh-ccCceEEEeccccCcccccHHH
Confidence            34688  9999999999999999987763  22111    11222223333222111 2347888888   889999999


Q ss_pred             HHHHHh
Q psy6598          80 NVHKKT   85 (154)
Q Consensus        80 ~~H~~~   85 (154)
                      ..||..
T Consensus       237 r~HM~~  242 (390)
T KOG2785|consen  237 RAHMRD  242 (390)
T ss_pred             HHHHhh
Confidence            999875

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=85.13  E-value=0.67  Score=22.16  Aligned_cols=9  Identities=33%  Similarity=0.715  Sum_probs=4.9

Q ss_pred             ceeCCCCcc
Q psy6598          63 PFICDRCPR   71 (154)
Q Consensus        63 ~~~C~~C~~   71 (154)
                      |..|+.||.
T Consensus        18 p~~CP~Cg~   26 (34)
T cd00729          18 PEKCPICGA   26 (34)
T ss_pred             CCcCcCCCC
Confidence            445666653

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG2785|consensus

Probab=84.84  E-value=1.1  Score=33.67  Aligned_cols=22  Identities=32%  Similarity=0.563  Sum_probs=16.4

Q ss_pred             CeecccccccccccCHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      ++.|.  .|.+.|.+......|+.
T Consensus        68 ~~~c~--~c~k~~~s~~a~~~hl~   89 (390)
T KOG2785|consen   68 VVYCE--ACNKSFASPKAHENHLK   89 (390)
T ss_pred             ceehH--HhhccccChhhHHHHHH
Confidence            56788  88888887777776654

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=84.16  E-value=1.6  Score=28.91  Aligned_cols=39  Identities=23%  Similarity=0.395  Sum_probs=29.1

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCch
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLC   77 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   77 (154)
                      .....-|.|..  |+..|+....+.         .-|.|+.||.......
T Consensus       104 e~~~~~Y~Cp~--c~~r~tf~eA~~---------~~F~Cp~Cg~~L~~~d  142 (158)
T TIGR00373       104 ETNNMFFICPN--MCVRFTFNEAME---------LNFTCPRCGAMLDYLD  142 (158)
T ss_pred             ccCCCeEECCC--CCcEeeHHHHHH---------cCCcCCCCCCEeeecc
Confidence            34556799965  999999988875         2499999998755443

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=83.43  E-value=0.43  Score=33.20  Aligned_cols=13  Identities=15%  Similarity=0.534  Sum_probs=10.0

Q ss_pred             eeCCCCcccccCc
Q psy6598          64 FICDRCPRSYRQL   76 (154)
Q Consensus        64 ~~C~~C~~~f~~~   76 (154)
                      ..|+.||.+|...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            6899999876644

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=82.50  E-value=1.8  Score=20.91  Aligned_cols=32  Identities=19%  Similarity=0.515  Sum_probs=17.3

Q ss_pred             eecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccc
Q psy6598          35 VCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSY   73 (154)
Q Consensus        35 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   73 (154)
                      .|..  |+..|.-.+...     -......+|+.|+..|
T Consensus         4 ~Cp~--C~~~y~i~d~~i-----p~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    4 TCPN--CQAKYEIDDEKI-----PPKGRKVRCSKCGHVF   35 (36)
T ss_pred             ECCC--CCCEEeCCHHHC-----CCCCcEEECCCCCCEe
Confidence            4543  666666655431     1223346777776665

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=82.33  E-value=0.77  Score=24.52  Aligned_cols=27  Identities=22%  Similarity=0.422  Sum_probs=18.8

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHhh
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTL   56 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   56 (154)
                      ..|+.-+.|.-  |+..|.......+|..
T Consensus        12 RDGE~~lrCPR--C~~~FR~~K~Y~RHVN   38 (65)
T COG4049          12 RDGEEFLRCPR--CGMVFRRRKDYIRHVN   38 (65)
T ss_pred             cCCceeeeCCc--hhHHHHHhHHHHHHhh
Confidence            35666677755  7777777777777765

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=82.27  E-value=1  Score=30.01  Aligned_cols=25  Identities=36%  Similarity=0.790  Sum_probs=19.9

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcc
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPR   71 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   71 (154)
                      +-|.|.+  ||..             |.++-|-.|++||.
T Consensus       133 ~~~vC~v--CGy~-------------~~ge~P~~CPiCga  157 (166)
T COG1592         133 KVWVCPV--CGYT-------------HEGEAPEVCPICGA  157 (166)
T ss_pred             CEEEcCC--CCCc-------------ccCCCCCcCCCCCC
Confidence            3699988  9865             55678899999984

>PF04959 ARS2: Arsenite-resistance protein 2; InterPro: IPR007042 This entry represents Arsenite-resistance protein 2 (also known as Serrate RNA effector molecule homolog) which is thought to play a role in arsenite resistance [], although does not directly confer arsenite resistance but rather modulates arsenic sensitivity []

Probab=81.74  E-value=0.63  Score=32.35  Aligned_cols=29  Identities=17%  Similarity=0.344  Sum_probs=18.3

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      ..|.|..|+|.|.-..-..+|+..-|.+.
T Consensus        76 ~K~~C~lc~KlFkg~eFV~KHI~nKH~e~  104 (214)
T PF04959_consen   76 DKWRCPLCGKLFKGPEFVRKHIFNKHPEK  104 (214)
T ss_dssp             EEEEE-SSS-EESSHHHHHHHHHHH-HHH
T ss_pred             CEECCCCCCcccCChHHHHHHHhhcCHHH
Confidence            34777777777777777777777666543

Arsenite is a carcinogenic compound which can act as a comutagen by inhibiting DNA repair. It is also involved in cell cycle progression at S phase. ; PDB: 3AX1_A.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=81.62  E-value=1.6  Score=22.25  Aligned_cols=26  Identities=19%  Similarity=0.496  Sum_probs=15.2

Q ss_pred             eeecccccCcccCChhhHHHHhhhhcCCCceeCCCCccc
Q psy6598          34 YVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRS   72 (154)
Q Consensus        34 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   72 (154)
                      |.|..  ||..|...           ...+..|+.||..
T Consensus         3 Y~C~~--Cg~~~~~~-----------~~~~irC~~CG~r   28 (44)
T smart00659        3 YICGE--CGRENEIK-----------SKDVVRCRECGYR   28 (44)
T ss_pred             EECCC--CCCEeecC-----------CCCceECCCCCce
Confidence            66655  77665543           2344677777654

present in RNA polymerase I, II and III

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=81.58  E-value=1.7  Score=21.09  Aligned_cols=28  Identities=25%  Similarity=0.560  Sum_probs=14.4

Q ss_pred             cCcccCChhhHHHHhhhhcCCCceeCCCCcccc
Q psy6598          41 CQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSY   73 (154)
Q Consensus        41 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   73 (154)
                      |+..|.-...-     .-.+....+|+.|+..|
T Consensus         8 C~~~f~v~~~~-----l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    8 CQTRFRVPDDK-----LPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             CCceEEcCHHH-----cccCCcEEECCCCCcEe
Confidence            66666655431     11223346666666655

>smart00531 TFIIE Transcription initiation factor IIE

Probab=81.50  E-value=2.3  Score=27.72  Aligned_cols=41  Identities=22%  Similarity=0.417  Sum_probs=27.1

Q ss_pred             CCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCc
Q psy6598          30 GEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQL   76 (154)
Q Consensus        30 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   76 (154)
                      ...-|.|..  |+..|.....+..-   .. ...|.|+.||......
T Consensus        96 ~~~~Y~Cp~--C~~~y~~~ea~~~~---d~-~~~f~Cp~Cg~~l~~~  136 (147)
T smart00531       96 NNAYYKCPN--CQSKYTFLEANQLL---DM-DGTFTCPRCGEELEED  136 (147)
T ss_pred             CCcEEECcC--CCCEeeHHHHHHhc---CC-CCcEECCCCCCEEEEc
Confidence            455799966  99999876554321   11 3339999999875443

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=81.18  E-value=1.3  Score=19.71  Aligned_cols=21  Identities=24%  Similarity=0.381  Sum_probs=15.1

Q ss_pred             eeCCCCcccccCchhHHHHHHh
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      ..|++|++.+ ....+..|+..
T Consensus         2 v~CPiC~~~v-~~~~in~HLD~   22 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLDS   22 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHHH
Confidence            4688888887 55677777753

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>KOG2186|consensus

Probab=80.95  E-value=1.3  Score=31.50  Aligned_cols=58  Identities=21%  Similarity=0.429  Sum_probs=44.4

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      .|.|..  ||..... ..+.+|+...++ .-|.|--|++.|.+ .....|..--.....|...
T Consensus         3 ~FtCnv--CgEsvKK-p~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH~kCITEaQKYg~~   60 (276)
T KOG2186|consen    3 FFTCNV--CGESVKK-PQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNHTKCITEAQKYGKK   60 (276)
T ss_pred             EEehhh--hhhhccc-cchHHHHHhccC-CeeEEeeccccccc-chhhhhhhhcchHHHhhhh
Confidence            378988  9987665 456779887777 56999999999998 6778887766665555544

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=80.56  E-value=1.9  Score=20.85  Aligned_cols=10  Identities=20%  Similarity=0.853  Sum_probs=5.8

Q ss_pred             eeCCCCcccc
Q psy6598          64 FICDRCPRSY   73 (154)
Q Consensus        64 ~~C~~C~~~f   73 (154)
                      +.|+.|+..|
T Consensus        26 v~C~~C~~~~   35 (38)
T TIGR02098        26 VRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEE
Confidence            5566666554

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=80.53  E-value=2.1  Score=28.94  Aligned_cols=37  Identities=22%  Similarity=0.462  Sum_probs=27.8

Q ss_pred             CCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCch
Q psy6598          30 GEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLC   77 (154)
Q Consensus        30 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   77 (154)
                      ...-|.|..  |+..|+....+.         .-|.|+.||.......
T Consensus       114 ~~~~Y~Cp~--C~~rytf~eA~~---------~~F~Cp~Cg~~L~~~d  150 (178)
T PRK06266        114 NNMFFFCPN--CHIRFTFDEAME---------YGFRCPQCGEMLEEYD  150 (178)
T ss_pred             CCCEEECCC--CCcEEeHHHHhh---------cCCcCCCCCCCCeecc
Confidence            446699965  999999888763         2599999998765543

>KOG4167|consensus

Probab=80.44  E-value=0.37  Score=39.12  Aligned_cols=26  Identities=27%  Similarity=0.580  Sum_probs=23.7

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      .|.|..|+|.|-.-.++..||++|.-
T Consensus       792 iFpCreC~kvF~KiKSrNAHMK~Hr~  817 (907)
T KOG4167|consen  792 IFPCRECGKVFFKIKSRNAHMKTHRQ  817 (907)
T ss_pred             eeehHHHHHHHHHHhhhhHHHHHHHH
Confidence            39999999999999999999999853

>TIGR00622 ssl1 transcription factor ssl1

Probab=80.34  E-value=3.2  Score=25.74  Aligned_cols=79  Identities=18%  Similarity=0.276  Sum_probs=46.4

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCce------------eecccccCcccCChhhHHHHhhhhcCCCceeCCCCc
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPY------------VCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP   70 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~------------~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   70 (154)
                      |-.|+  .||-+......|.+-..--...++|            .|--  |...|........  ..-.....|.|+.|.
T Consensus        15 P~~Cp--iCgLtLVss~HLARSyHHLfPl~~f~ev~~~~~~~~~~C~~--C~~~f~~~~~~~~--~~~~~~~~y~C~~C~   88 (112)
T TIGR00622        15 PVECP--ICGLTLILSTHLARSYHHLFPLKAFQEIPLEEYNGSRFCFG--CQGPFPKPPVSPF--DELKDSHRYVCAVCK   88 (112)
T ss_pred             CCcCC--cCCCEEeccchHHHhhhccCCCcccccccccccCCCCcccC--cCCCCCCcccccc--cccccccceeCCCCC
Confidence            55677  8888777777776532111111111            3755  8888876431110  001223458999999


Q ss_pred             ccccCchhHHHHHHhhc
Q psy6598          71 RSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        71 ~~f~~~~~l~~H~~~~~   87 (154)
                      ..|-..-..-.|...|.
T Consensus        89 ~~FC~dCD~fiHe~Lh~  105 (112)
T TIGR00622        89 NVFCVDCDVFVHESLHC  105 (112)
T ss_pred             CccccccchhhhhhccC
Confidence            98888877777877654

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	154
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-10
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		2e-10
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-10
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-10
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		9e-10
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-09
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		4e-09
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-08
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		1e-08
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-08
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-08
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		8e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		5e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		7e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		8e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-06
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		1e-06
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-06
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		4e-06
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		4e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		5e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		7e-05
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		8e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		1e-04
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		8e-04

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 50/88 (56%), Gaps = 2/88 (2%)
Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +P+      C   F+  TN   H+RIH+G+KP+ C++  C + F++++ L +H   H+  
Sbjct: 3  RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQHTGLNQHIRTHTGE 60
Query: 62 RPFICDRCPRSYRQLCTLNVHKKTNHRE 89
          +PF CD C R +  L T + H K + R+
Sbjct: 61 KPFACDICGRKFATLHTRDRHTKIHLRQ 88

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 30/86 (34%), Positives = 47/86 (54%), Gaps = 2/86 (2%)
Query: 10  DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
           +C  SF+   +   H R H+GEKPY C   +C K F++ ++L  H   H+  +P+ C  C
Sbjct: 54  ECGKSFSDKKDLTRHQRTHTGEKPYKCP--ECGKSFSQRANLRAHQRTHTGEKPYACPEC 111
Query: 70  PRSYRQLCTLNVHKKTNHRESKNKKP 95
            +S+ QL  L  H++T+  E   K P
Sbjct: 112 GKSFSQLAHLRAHQRTHTGEKPYKCP 137

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 61.2 bits (147), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
          +C  SF+ ++N + H R H+GEKPY C   +C K F++ S L KH   H+  +P+ C  C
Sbjct: 9  ECGKSFSQSSNLQKHQRTHTGEKPYKCP--ECGKSFSQSSDLQKHQRTHTGEKPYKCPEC 66
Query: 70 PRSYRQLCTLNVHKKTN 86
           +S+ +   L+ H++T+
Sbjct: 67 GKSFSRSDHLSRHQRTH 83

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 2/88 (2%)
Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +P+      C   F+  TN   H+RIH+G+KP+ C++  C + F++ +SL  H   H+  
Sbjct: 3  RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRI--CMRNFSQQASLNAHIRTHTGE 60
Query: 62 RPFICDRCPRSYRQLCTLNVHKKTNHRE 89
          +PF CD C R +  L T   H K + R+
Sbjct: 61 KPFACDICGRKFATLHTRTRHTKIHLRQ 88

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 59.3 bits (142), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 45/85 (52%)
Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +PF      C   +   ++ + H R H+GEKPY C  +DC++RF+    L +H   H+ +
Sbjct: 5  RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64
Query: 62 RPFICDRCPRSYRQLCTLNVHKKTN 86
          +PF C  C R + +   L  H +T+
Sbjct: 65 KPFQCKTCQRKFSRSDHLKTHTRTH 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 57.8 bits (138), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
          C   F+     K HMR H+G KPY C+   C     + SSL KH  +HSD RPF C  CP
Sbjct: 14 CGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQICP 71
Query: 71 RSYRQLCTLNVHKKTNHRES 90
           + R    L VH +++  +S
Sbjct: 72 YASRNSSQLTVHLRSHTGDS 91

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 30/92 (32%), Positives = 48/92 (52%), Gaps = 3/92 (3%)
Query: 3   PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIR 62
           P  +   +C  +F  ++  K H  +H+GEKP+ C    C KRF+   +L  H  +H+  R
Sbjct: 32  PRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDR 91
Query: 63  PFIC--DRCPRSYRQLCTLNVHKKTNHRESKN 92
           P++C  D C + + Q   L  H  T H ++KN
Sbjct: 92  PYVCPFDGCNKKFAQSTNLKSHILT-HAKAKN 122

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
          C  ++  +++ K H+R H+GEKPY C    C  +F     L +H   H+  RPF C +C 
Sbjct: 14 CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 71 RSYRQLCTLNVHKK 84
          R++ +   L +H K
Sbjct: 74 RAFSRSDHLALHMK 87

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 30/81 (37%), Positives = 44/81 (54%), Gaps = 3/81 (3%)
Query: 10  DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHT-LVHSDIRPFICD- 67
            C+ S++   N K H+R H+GEKPY+C+   C K F+  S   KH    HS+ +P++C  
Sbjct: 74  GCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKL 133
Query: 68  -RCPRSYRQLCTLNVHKKTNH 87
             C + Y    +L  H KT H
Sbjct: 134 PGCTKRYTDPSSLRKHVKTVH 154

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%)
Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
          C  ++  +++ K H+R H+GEKPY C    C  +F     L +H   H+  RPF C +C 
Sbjct: 13 CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 71 RSYRQLCTLNVHKK 84
          R++ +   L +H K
Sbjct: 73 RAFSRSDHLALHMK 86

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 38/74 (51%)
Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
          C   +  +++ K H+R H+GEKPY C    C  RF     L +H   H+  +PF C  C 
Sbjct: 23 CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 71 RSYRQLCTLNVHKK 84
          RS+ +   L +H K
Sbjct: 83 RSFSRSDHLALHMK 96

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 55.1 bits (131), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 5/79 (6%)
Query: 9  WDCKI---SFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFI 65
          +DCKI   SF  ++    H+ IHS  +PY CQ   C KRF + S + KHT +H+  +P  
Sbjct: 2  FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHK 59
Query: 66 CDRCPRSYRQLCTLNVHKK 84
          C  C +++ Q   L  H +
Sbjct: 60 CQVCGKAFSQSSNLITHSR 78

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 23/72 (31%), Positives = 39/72 (54%), Gaps = 2/72 (2%)
Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +P+      C   F+ ++N   H+RIH+G+KP+ C++  C + F+    L  H   H+  
Sbjct: 3  RPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 62 RPFICDRCPRSY 73
          +PF CD C R +
Sbjct: 61 KPFACDICGRKF 72

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +P+      C   F+ + +   H+RIH+G+KP+ C++  C + F+    L  H   H+  
Sbjct: 3  RPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 62 RPFICDRCPRSY 73
          +PF CD C R +
Sbjct: 61 KPFACDICGRKF 72

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +P+      C   F+ + +   H+RIH+G+KP+ C++  C + F+    L  H   H+  
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 62 RPFICDRCPRSY 73
          +PF CD C R +
Sbjct: 61 KPFACDICGRKF 72

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +P+      C   F+ +     H+RIH+G+KP+ C++  C + F+    L  H   H+  
Sbjct: 3  RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 62 RPFICDRCPRSY 73
          +PF CD C R +
Sbjct: 61 KPFACDICGRKF 72

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 50.1 bits (118), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 27/73 (36%), Positives = 35/73 (47%), Gaps = 2/73 (2%)
Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
          C   F  + N   H R H+ E+PY C +  C K F     L  H  +HS  +PF C  C 
Sbjct: 23 CGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQECG 80
Query: 71 RSYRQLCTLNVHK 83
          + + Q  TL VHK
Sbjct: 81 KGFCQSRTLAVHK 93

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +P+      C   F+ +     H+RIH+G+KP+ C++  C + F+    L  H   H+  
Sbjct: 3  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 62 RPFICDRCPRSY 73
          +PF CD C R +
Sbjct: 61 KPFACDICGRKF 72

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +P+      C   F+ +     H+RIH+G+KP+ C++  C + F+    L  H   H+  
Sbjct: 2  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 59
Query: 62 RPFICDRCPRSY 73
          +PF CD C R +
Sbjct: 60 KPFACDICGRKF 71

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 2/72 (2%)
Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +P+      C   F+ +     H+RIH+G+KP+ C++  C + F+    L  H   H+  
Sbjct: 3  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGE 60
Query: 62 RPFICDRCPRSY 73
          +PF CD C R +
Sbjct: 61 KPFACDICGRKF 72

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 67
          DC  ++      + H+  H+GEKP+ C+   C+K FT    L +H+L H+  + F CD
Sbjct: 10 DCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCD 67

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 22/67 (32%), Positives = 34/67 (50%), Gaps = 2/67 (2%)
Query: 7  FPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +P  C  SF   +    HM +H G +PY C V  C K+F     L  H  +H+ I+P+ C
Sbjct: 11 YPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYEC 68
Query: 67 DRCPRSY 73
          + C + +
Sbjct: 69 NICAKRF 75

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 47.4 bits (111), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 26/59 (44%), Positives = 32/59 (54%), Gaps = 2/59 (3%)
Query: 2   KPF-FYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
           KPF   FP  C   FA + N K H R H+GEKP+ C+   C +RF   S   KH  VH+
Sbjct: 89  KPFPCPFP-GCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 20/58 (34%), Positives = 32/58 (55%)
Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 67
          DC  ++      + H+  H+GEKP+ C+   C+K FT    L +H+L H+  + F CD
Sbjct: 19 DCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCD 76

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.5 bits (101), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 2/54 (3%)
Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRP 63
          +C  SF+ +++   H R H+GEKPY C   +C K F + S L  H  VH+   P
Sbjct: 23 ECGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHLIGHHRVHTGSGP 74

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 42.7 bits (99), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/53 (37%), Positives = 30/53 (56%), Gaps = 2/53 (3%)
Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRP 63
          C+ SF    N  +H  +H+GEKPY C +  C  +F   ++L  HT +HS  +P
Sbjct: 23 CQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 16/49 (32%), Positives = 27/49 (55%)
Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
           C  ++  +++ K H R H+GEKP+ C  + C++RF     L +H   H
Sbjct: 24 GCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 42.0 bits (97), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTN 86
          +PY C V  C +RF+    L +H  +H+  +PF C  C R++ +   L  H +T+
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Query: 6  YFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD 60
          Y   +C  +F+ ++    H R+H+GEKPY C   +C K F++ S L  H  +H+ 
Sbjct: 15 YGCVECGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSGLINHQRIHTS 67

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 39.7 bits (91), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 41/85 (48%), Gaps = 2/85 (2%)
Query: 5   FYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF 64
           +Y    CK S+   T+ + H  IHS EK Y C  R C+K F       KH + H+  R +
Sbjct: 22  YYICIVCKRSYVCLTSLRRHFNIHSWEKKYPC--RYCEKVFPLAEYRTKHEIHHTGERRY 79
Query: 65  ICDRCPRSYRQLCTLNVHKKTNHRE 89
            C  C +S+     ++ H K+ H +
Sbjct: 80  QCLACGKSFINYQFMSSHIKSVHSQ 104

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	154
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-21
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-15
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-14
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-13
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	9e-21
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-08
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-20
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-12
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	6e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-19
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-18
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-17
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	6e-05
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-16
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-12
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-11
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-16
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	7e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	9e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-14
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-09
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	7e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-10
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	6e-14
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-05
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-08
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	8e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-09
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	4e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-09
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-09
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	6e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-09
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-09
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	7e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-08
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	8e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	9e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-04
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	8e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	4e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	7e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-04

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 81.9 bits (203), Expect = 8e-21
 Identities = 31/87 (35%), Positives = 45/87 (51%), Gaps = 3/87 (3%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKH-TLVHSD 60
           KP       C+ S++   N K H+R H+GEKPY+C+   C K F+  S   KH    HS+
Sbjct: 66  KPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125

Query: 61  IRPFICDR--CPRSYRQLCTLNVHKKT 85
            +P++C    C + Y    +L  H KT
Sbjct: 126 EKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 68.8 bits (169), Expect = 1e-15
 Identities = 20/76 (26%), Positives = 36/76 (47%), Gaps = 2/76 (2%)

Query: 14  SFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC--DRCPR 71
            F +      HMR H+GEKP+ C    C+K ++   +L  H   H+  +P++C  + C +
Sbjct: 48  PFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSK 107

Query: 72  SYRQLCTLNVHKKTNH 87
           ++        H+   H
Sbjct: 108 AFSNASDRAKHQNRTH 123

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 64.2 bits (157), Expect = 6e-14
 Identities = 22/51 (43%), Positives = 31/51 (60%), Gaps = 1/51 (1%)

Query: 10  DCKISFASATNYKNHM-RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
            C  +F++A++   H  R HS EKPYVC++  C KR+T+ SSL KH     
Sbjct: 104 GCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 61.8 bits (151), Expect = 4e-13
 Identities = 22/84 (26%), Positives = 32/84 (38%), Gaps = 8/84 (9%)

Query: 10 DCKISFASATNYKNHM---RIHSGEKPYVCQVRDCQ---KRFTEYSSLYKHTLVHSDIRP 63
           C   F S     +H+    IH   K +VC    C    + F     L  H   H+  +P
Sbjct: 8  GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKP 67

Query: 64 FICDR--CPRSYRQLCTLNVHKKT 85
            C    C +SY +L  L  H ++
Sbjct: 68 HKCTFEGCRKSYSRLENLKTHLRS 91

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 41.8 bits (99), Expect = 1e-05
 Identities = 13/63 (20%), Positives = 21/63 (33%), Gaps = 10/63 (15%)

Query: 31 EKPYVCQVRDCQKRFTEYSSLYKHTL---VHSDIRPFIC-----DRCPRSYRQLCTLNVH 82
          E         C + F     L  H     +H + + F+C      R  R ++    L VH
Sbjct: 1  ETDCRWD--GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVH 58

Query: 83 KKT 85
           + 
Sbjct: 59 MRR 61

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 79.5 bits (197), Expect = 9e-21
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 4/70 (5%)

Query: 20 NYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS--DIRPFICDRCPRSYRQLC 77
          +  +  R HSGEKPY C +  C  RFT+  ++  H L     ++  F C  C     +  
Sbjct: 2  SSGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKS 59

Query: 78 TLNVHKKTNH 87
           L VH +  H
Sbjct: 60 DLGVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 10/46 (21%), Positives = 13/46 (28%), Gaps = 4/46 (8%)

Query: 11 CKISFASATNYKNHMRIHSGE--KPYVCQVRDCQKRFTEYSSLYKH 54
          C   F  +   K H+     E    + C    C       S L  H
Sbjct: 21 CHARFTQSGTMKMHILQKHTENVAKFHCP--HCDTVIARKSDLGVH 64

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 79.1 bits (196), Expect = 4e-20
 Identities = 27/84 (32%), Positives = 44/84 (52%)

Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +PF      C   +   ++ + H R H+GEKPY C  +DC++RF+    L +H   H+ +
Sbjct: 5  RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGV 64

Query: 62 RPFICDRCPRSYRQLCTLNVHKKT 85
          +PF C  C R + +   L  H +T
Sbjct: 65 KPFQCKTCQRKFSRSDHLKTHTRT 88

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 71.8 bits (177), Expect = 3e-17
 Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 4/86 (4%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           KP+     DC+  F+ +   K H R H+G KP+ C+   CQ++F+    L  HT  H+  
Sbjct: 35  KPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCK--TCQRKFSRSDHLKTHTRTHTGE 92

Query: 62  RPFICDR--CPRSYRQLCTLNVHKKT 85
           +PF C    C + + +   L  H   
Sbjct: 93  KPFSCRWPSCQKKFARSDELVRHHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 18/49 (36%), Positives = 28/49 (57%)

Query: 10  DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
            C+  F+ + + K H R H+GEKP+ C+   CQK+F     L +H  +H
Sbjct: 71  TCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 52.9 bits (128), Expect = 5e-10
 Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 2/59 (3%)

Query: 29 SGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR--CPRSYRQLCTLNVHKKT 85
          S ++P++C    C KR+ + S L  H+  H+  +P+ CD   C R + +   L  H++ 
Sbjct: 2  SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR 60

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 78.1 bits (193), Expect = 6e-20
 Identities = 26/75 (34%), Positives = 38/75 (50%)

Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
          C   +  +++ K H+R H+GEKPY C    C  RF     L +H   H+  +PF C  C 
Sbjct: 23 CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82

Query: 71 RSYRQLCTLNVHKKT 85
          RS+ +   L +H K 
Sbjct: 83 RSFSRSDHLALHMKR 97

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 53.0 bits (128), Expect = 3e-10
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 2/59 (3%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD 60
           KP+      C   FA +     H R H+G KP+ C V  C + F+    L  H   H +
Sbjct: 44  KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGV--CNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 48.0 bits (115), Expect = 3e-08
 Identities = 18/74 (24%), Positives = 29/74 (39%), Gaps = 8/74 (10%)

Query: 14 SFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC--DRCPR 71
          S  S+       RIH  + P       C K +T+ S L  H   H+  +P+ C  + C  
Sbjct: 2  SSGSSGPDLEKRRIHYCDYPG------CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDW 55

Query: 72 SYRQLCTLNVHKKT 85
           + +   L  H + 
Sbjct: 56 RFARSDELTRHYRK 69

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 75.6 bits (187), Expect = 5e-19
 Identities = 25/76 (32%), Positives = 40/76 (52%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
           C  ++  +++ K H+R H+GEKPY C    C  +F     L +H   H+  RPF C +C
Sbjct: 12 GCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKC 71

Query: 70 PRSYRQLCTLNVHKKT 85
           R++ +   L +H K 
Sbjct: 72 DRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 51.8 bits (125), Expect = 8e-10
 Identities = 17/57 (29%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
          KP+      C   FA +     H R H+G +P+ CQ   C + F+    L  H   H
Sbjct: 34 KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/60 (21%), Positives = 22/60 (36%), Gaps = 4/60 (6%)

Query: 28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR--CPRSYRQLCTLNVHKKT 85
           +           C K +T+ S L  H   H+  +P+ CD   C   + +   L  H + 
Sbjct: 2  RTATHTCDYA--GCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 74.4 bits (184), Expect = 1e-18
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 2/84 (2%)

Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +P+      C   F+ + +   H+RIH+G+KP+ C  R C + F+    L  H   H+  
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60

Query: 62 RPFICDRCPRSYRQLCTLNVHKKT 85
          +PF CD C R + +      H K 
Sbjct: 61 KPFACDICGRKFARSDERKRHTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 55.9 bits (136), Expect = 2e-11
 Identities = 20/55 (36%), Positives = 32/55 (58%)

Query: 31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT 85
          E+PY C V  C +RF++  SL +H  +H+  +PF C  C R++ +   L  H +T
Sbjct: 2  ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRT 56

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 53.2 bits (129), Expect = 2e-10
 Identities = 17/54 (31%), Positives = 30/54 (55%), Gaps = 5/54 (9%)

Query: 8  PWDCKI---SFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
          P+ C+I   +F+ + +   H+R H+GEKP+ C    C ++F       +HT +H
Sbjct: 34 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERKRHTKIH 85

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 73.0 bits (180), Expect = 4e-18
 Identities = 18/73 (24%), Positives = 28/73 (38%), Gaps = 1/73 (1%)

Query: 2  KPFFYFPWDCKISFASATNYKNHMRI-HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD 60
                   C   F++     +H +  H  +K + C    C K F     L +H  +HSD
Sbjct: 6  SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

Query: 61 IRPFICDRCPRSY 73
           R +IC+    S 
Sbjct: 66 TRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 15/61 (24%), Positives = 20/61 (32%), Gaps = 3/61 (4%)

Query: 28 HSGEKPYVCQVRDCQKRFTEYSSLYKHT-LVHSDIRPFICD--RCPRSYRQLCTLNVHKK 84
           SG     C    C + F+    L  H    H   + F C    C +S+     L  H K
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 85 T 85
           
Sbjct: 62 L 62

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 71.9 bits (177), Expect = 1e-17
 Identities = 21/78 (26%), Positives = 29/78 (37%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
          +C  +F      K H   H+ + PY C    C KRF+  S L +H  VH+       D C
Sbjct: 8  NCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSC 67

Query: 70 PRSYRQLCTLNVHKKTNH 87
              +       H    H
Sbjct: 68 SFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 38.8 bits (91), Expect = 6e-05
 Identities = 18/64 (28%), Positives = 27/64 (42%), Gaps = 3/64 (4%)

Query: 34 YVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD--RCPRSYRQLCTLNVHKKTNHRESK 91
          YVC   +C K F +++ L  H   H+   P+ C    C + +     L  H+K  H    
Sbjct: 2  YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAGYP 60

Query: 92 NKKP 95
           KK 
Sbjct: 61 CKKD 64

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 72.9 bits (180), Expect = 1e-17
 Identities = 25/78 (32%), Positives = 40/78 (51%), Gaps = 2/78 (2%)

Query: 10  DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR- 68
           +C  +F  ++  K H  +H+GEKP+ C    C KRF+   +L  H  +H+  RP++C   
Sbjct: 39  ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFD 98

Query: 69  -CPRSYRQLCTLNVHKKT 85
            C + + Q   L  H  T
Sbjct: 99  GCNKKFAQSTNLKSHILT 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 65.6 bits (161), Expect = 9e-15
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 5/86 (5%)

Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
          +        C   F   +  + H+  H G + +VC   +C K F E S L +H LVH+  
Sbjct: 4  RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCA--ECGKAFVESSKLKRHQLVHTGE 60

Query: 62 RPFICDR--CPRSYRQLCTLNVHKKT 85
          +PF C    C + +     L  H + 
Sbjct: 61 KPFQCTFEGCGKRFSLDFNLRTHVRI 86

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 63.7 bits (156), Expect = 4e-14
 Identities = 22/63 (34%), Positives = 34/63 (53%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           KPF      C   F+   N + H+RIH+G++PYVC    C K+F + ++L  H L H+  
Sbjct: 61  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA 120

Query: 62  RPF 64
           +  
Sbjct: 121 KNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 54.1 bits (131), Expect = 2e-10
 Identities = 13/55 (23%), Positives = 24/55 (43%), Gaps = 1/55 (1%)

Query: 31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT 85
           +   C  + C K F + S++ KH   H   R  +C  C +++ +   L  H+  
Sbjct: 3  PRTIACPHKGCTKMFRDNSAMRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLV 56

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 70.9 bits (175), Expect = 3e-17
 Identities = 31/75 (41%), Positives = 39/75 (52%), Gaps = 2/75 (2%)

Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
          C   F+     K HMR H+G KPY C+   C     + SSL KH  +HSD RPF C  CP
Sbjct: 14 CGKCFSRKDKLKTHMRCHTGVKPYKCK--TCDYAAADSSSLNKHLRIHSDERPFKCQICP 71

Query: 71 RSYRQLCTLNVHKKT 85
           + R    L VH ++
Sbjct: 72 YASRNSSQLTVHLRS 86

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 55.1 bits (134), Expect = 4e-11
 Identities = 16/57 (28%), Positives = 24/57 (42%), Gaps = 2/57 (3%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
           C  + A +++   H+RIHS E+P+ CQ   C       S L  H   H+       
Sbjct: 41 TCDYAAADSSSLNKHLRIHSDERPFKCQ--ICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 50.9 bits (123), Expect = 2e-09
 Identities = 14/58 (24%), Positives = 24/58 (41%), Gaps = 2/58 (3%)

Query: 28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT 85
               P+ C+   C K F+    L  H   H+ ++P+ C  C  +     +LN H + 
Sbjct: 3  SGSSGPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRI 58

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 72.7 bits (179), Expect = 3e-17
 Identities = 24/66 (36%), Positives = 31/66 (46%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           KPF      C   FA + N K H R H+GEKP+ C+   C +RF   S   KH  VH+  
Sbjct: 89  KPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD 148

Query: 62  RPFICD 67
           +     
Sbjct: 149 KSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 70.0 bits (172), Expect = 3e-16
 Identities = 23/77 (29%), Positives = 33/77 (42%), Gaps = 2/77 (2%)

Query: 11  CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR-- 68
              SF +     NH+R+H+GEKP+ C    C K F    +L  H   H+  +PF C+   
Sbjct: 68  EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEG 127

Query: 69  CPRSYRQLCTLNVHKKT 85
           C R +        H   
Sbjct: 128 CDRRFANSSDRKKHMHV 144

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 58.5 bits (142), Expect = 7e-12
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 9/85 (10%)

Query: 10  DCKISFASATNYKNHMRIHSGEKPY----VCQVRDCQ---KRFTEYSSLYKHTLVHSDIR 62
            C  +F++      H+ +     P     VC   +C    K F     L  H  VH+  +
Sbjct: 30  SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEK 89

Query: 63  PFICDR--CPRSYRQLCTLNVHKKT 85
           PF C    C + + +   L +HK+T
Sbjct: 90  PFPCPFPGCGKIFARSENLKIHKRT 114

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 51.9 bits (125), Expect = 2e-09
 Identities = 12/85 (14%), Positives = 22/85 (25%), Gaps = 11/85 (12%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF----- 64
              S        +   I   +     +   C + F+    L  H  +     P      
Sbjct: 2  SSGSSGQPIKQELSCKWIDEAQLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHV 59

Query: 65 ----ICDRCPRSYRQLCTLNVHKKT 85
               C R  +S++    L  H + 
Sbjct: 60 CYWEECPREGKSFKAKYKLVNHIRV 84

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 69.1 bits (170), Expect = 2e-16
 Identities = 26/85 (30%), Positives = 34/85 (40%), Gaps = 7/85 (8%)

Query: 8  PWDCKI---SFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS--DIR 62
             C+I    F    +   H   HSGEKPY C    C  RF     +  H   H     +
Sbjct: 7  GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGK 64

Query: 63 PFICDRCPRSYRQLCTLNVHKKTNH 87
          P+IC  C + + +   LN H K  H
Sbjct: 65 PYICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 55.6 bits (135), Expect = 3e-11
 Identities = 15/58 (25%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT 85
           SG     C+   C K F +   L +H L HS  +P+ C  C   +++   ++ H ++
Sbjct: 2  SSGSSGVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRS 57

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 70.3 bits (173), Expect = 4e-16
 Identities = 24/90 (26%), Positives = 39/90 (43%), Gaps = 2/90 (2%)

Query: 2   KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           K +     DC  ++      + H+  H+GEKP+ C+   C+K FT    L +H+L H+  
Sbjct: 11  KRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE 70

Query: 62  RPFICD--RCPRSYRQLCTLNVHKKTNHRE 89
           + F CD   C   +     +  H    H  
Sbjct: 71  KNFTCDSDGCDLRFTTKANMKKHFNRFHNI 100

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 68.8 bits (169), Expect = 2e-15
 Identities = 21/80 (26%), Positives = 31/80 (38%)

Query: 10  DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
           +C  +F      K H   H+ + PY C    C KRF+  S L +H  VH+       D C
Sbjct: 111 NCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSC 170

Query: 70  PRSYRQLCTLNVHKKTNHRE 89
               +       H    H++
Sbjct: 171 SFVGKTWTLYLKHVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 64.9 bits (159), Expect = 5e-14
 Identities = 16/65 (24%), Positives = 24/65 (36%), Gaps = 2/65 (3%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD--RCPRSYRQLCTLN 80
              +    K Y+C   DC   + +   L  H   H+  +PF C    C + +  L  L 
Sbjct: 2  GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 81 VHKKT 85
           H  T
Sbjct: 62 RHSLT 66

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 63.8 bits (156), Expect = 2e-13
 Identities = 24/90 (26%), Positives = 36/90 (40%), Gaps = 5/90 (5%)

Query: 10  DCKISFASATNYKNHMRIHSGEK--PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC- 66
            C + F +  N K H       K   YVC   +C K F +++ L  H   H+   P+ C 
Sbjct: 79  GCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECP 138

Query: 67  -DRCPRSYRQLCTLNVHKKTNHRESKNKKP 95
            + C + +     L  H+K  H     KK 
Sbjct: 139 HEGCDKRFSLPSRLKRHEKV-HAGYPCKKD 167

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 67.1 bits (165), Expect = 7e-16
 Identities = 22/87 (25%), Positives = 37/87 (42%), Gaps = 11/87 (12%)

Query: 1  MKPFFYFPWDCKI---SFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLV 57
          MKPF      C+I   +F+ + +   H+R H+GEKP+ C    C ++F       +H  +
Sbjct: 1  MKPF-----QCRICMRNFSRSDHLTTHIRTHTGEKPFACD--ICGRKFARSDERKRHRDI 53

Query: 58 HSDIRPFICDRCPRSYRQLCTLNVHKK 84
             I P + D+      +   L     
Sbjct: 54 QH-ILPILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 46.7 bits (112), Expect = 7e-08
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 3/58 (5%)

Query: 32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE 89
          KP+ C  R C + F+    L  H   H+  +PF CD C R + +      H+      
Sbjct: 2  KPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDI-QHI 56

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 65.5 bits (160), Expect = 3e-15
 Identities = 13/67 (19%), Positives = 27/67 (40%), Gaps = 5/67 (7%)

Query: 28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI---RPFICDRCPRSYRQLCTLNVHKK 84
           SG     C++  C     + +SL  H   H++      F C+ C + + +  ++  H+ 
Sbjct: 2  SSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS 59

Query: 85 TNHRESK 91
           +H    
Sbjct: 60 KSHPALL 66

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 53.9 bits (130), Expect = 9e-11
 Identities = 12/69 (17%), Positives = 20/69 (28%), Gaps = 8/69 (11%)

Query: 8  PWDCKI---SFASATNYKNHMRIHS---GEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
             C+I   +     +   H R H+       + C+   C KRF +  S+  H       
Sbjct: 7  GLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPA 64

Query: 62 RPFICDRCP 70
                   
Sbjct: 65 LLLAPQESS 73

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 65.1 bits (160), Expect = 5e-15
 Identities = 26/76 (34%), Positives = 39/76 (51%), Gaps = 2/76 (2%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
           C  SF  ++    H+ IHS  +PY CQ   C KRF + S + KHT +H+  +P  C  C
Sbjct: 6  ICGKSFKRSSTLSTHLLIHSDTRPYPCQ--YCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63

Query: 70 PRSYRQLCTLNVHKKT 85
           +++ Q   L  H + 
Sbjct: 64 GKAFSQSSNLITHSRK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 48.2 bits (116), Expect = 2e-08
 Identities = 19/49 (38%), Positives = 27/49 (55%), Gaps = 2/49 (4%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
           C   F   ++ K H  IH+GEKP+ CQ   C K F++ S+L  H+  H
Sbjct: 34 YCGKRFHQKSDMKKHTFIHTGEKPHKCQ--VCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 38.6 bits (91), Expect = 5e-05
 Identities = 17/52 (32%), Positives = 25/52 (48%), Gaps = 2/52 (3%)

Query: 34 YVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT 85
          + C+   C K F   S+L  H L+HSD RP+ C  C + + Q   +  H   
Sbjct: 2  FDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI 51

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 63.7 bits (156), Expect = 1e-14
 Identities = 15/65 (23%), Positives = 29/65 (44%), Gaps = 4/65 (6%)

Query: 26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKH--TLVHSDIRPFICDRCPRSYRQLCTLNVHK 83
              GE  Y C+V  C + +T  S+  +H  T    +++ + C  C + + +   +  H 
Sbjct: 3  FTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHV 60

Query: 84 KTNHR 88
          K  H+
Sbjct: 61 KIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 44.9 bits (107), Expect = 2e-07
 Identities = 12/54 (22%), Positives = 18/54 (33%), Gaps = 4/54 (7%)

Query: 10 DCKISFASATNYKNHMRI--HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI 61
           C   +   +N+  H         K Y C    C K FT   ++  H  +   I
Sbjct: 15 VCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHKI 66

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 63.9 bits (156), Expect = 1e-14
 Identities = 20/73 (27%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 13 ISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRS 72
          +      N  N++      +PY C V  C +RF+    L +H  +H+  +PF C  C R+
Sbjct: 1  MEPHPMNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58

Query: 73 YRQLCTLNVHKKT 85
          + +   L  H +T
Sbjct: 59 FSRSDHLTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 49.6 bits (119), Expect = 3e-09
 Identities = 16/58 (27%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          +P+      C   F+ +     H+RIH+G+KP+ C++  C + F+    L  H   H+
Sbjct: 18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT 73

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 63.2 bits (155), Expect = 4e-14
 Identities = 27/76 (35%), Positives = 34/76 (44%), Gaps = 2/76 (2%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
           C   F  + N   H R H+ E+PY C    C K F     L  H  +HS  +PF C  C
Sbjct: 22 FCGRHFTKSYNLLIHERTHTDERPYTCD--ICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79

Query: 70 PRSYRQLCTLNVHKKT 85
           + + Q  TL VHK  
Sbjct: 80 GKGFCQSRTLAVHKTL 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 62.5 bits (153), Expect = 7e-14
 Identities = 17/63 (26%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVH 82
                  +K ++C+   C + FT+  +L  H   H+D RP+ CD C +++R+   L  H
Sbjct: 7  GGRLPSKTKKEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64

Query: 83 KKT 85
          +  
Sbjct: 65 RYI 67

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 52.1 bits (126), Expect = 8e-10
 Identities = 19/62 (30%), Positives = 29/62 (46%), Gaps = 5/62 (8%)

Query: 8   PWDCKI---SFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF 64
           P+ C I   +F    + ++H  IHS EKP+ CQ  +C K F +  +L  H  +H      
Sbjct: 45  PYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ--ECGKGFCQSRTLAVHKTLHMQTSSP 102

Query: 65  IC 66
             
Sbjct: 103 TA 104

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 63.7 bits (156), Expect = 5e-14
 Identities = 22/79 (27%), Positives = 35/79 (44%), Gaps = 5/79 (6%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKH---TLVHSDIRPFIC 66
           C   F S    K H R H+GEKP+ C    C K +    +L +H     ++   + F C
Sbjct: 12 TCHKKFLSKYYLKVHNRKHTGEKPFEC--PKCGKCYFRKENLLEHEARNCMNRSEQVFTC 69

Query: 67 DRCPRSYRQLCTLNVHKKT 85
            C  ++R+   L +H  +
Sbjct: 70 SVCQETFRRRMELRLHMVS 88

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 59.1 bits (144), Expect = 2e-12
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 5/81 (6%)

Query: 10  DCKISFASATNYKNHMR---IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
            C   +    N   H     ++  E+ + C    CQ+ F     L  H + H+   P+ C
Sbjct: 40  KCGKCYFRKENLLEHEARNCMNRSEQVFTCS--VCQETFRRRMELRLHMVSHTGEMPYKC 97

Query: 67  DRCPRSYRQLCTLNVHKKTNH 87
             C + + Q   L  H    H
Sbjct: 98  SSCSQQFMQKKDLQSHMIKLH 118

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 17/59 (28%), Positives = 24/59 (40%), Gaps = 2/59 (3%)

Query: 28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTN 86
           SG     C    C K+F     L  H   H+  +PF C +C + Y +   L  H+  N
Sbjct: 2  SSGSSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARN 58

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 62.1 bits (152), Expect = 6e-14
 Identities = 17/63 (26%), Positives = 28/63 (44%), Gaps = 2/63 (3%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVH 82
          +H  +   +KPY C    CQ  F    +L  H  VH+  +P+ C+ C   + +   L  H
Sbjct: 7  HHSHMTHSDKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 83 KKT 85
           + 
Sbjct: 65 TRI 67

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 49.8 bits (120), Expect = 3e-09
 Identities = 18/49 (36%), Positives = 26/49 (53%), Gaps = 2/49 (4%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
           C+ SF    N  +H  +H+GEKPY C    C  +F   ++L  HT +H
Sbjct: 22 RCQASFRYKGNLASHKTVHTGEKPYRCN--ICGAQFNRPANLKTHTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 35.1 bits (82), Expect = 8e-04
 Identities = 14/25 (56%), Positives = 14/25 (56%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPY 34
           C   F    N K H RIHSGEKPY
Sbjct: 50 ICGAQFNRPANLKTHTRIHSGEKPY 74

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 61.2 bits (149), Expect = 6e-14
 Identities = 13/45 (28%), Positives = 20/45 (44%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 67
          +     +GEKP+ C    C  RF+    L +H   HS ++P    
Sbjct: 2  SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 9/28 (32%), Positives = 11/28 (39%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQ 37
           C   F+ +     H R HSG KP    
Sbjct: 19 GCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 61.4 bits (150), Expect = 1e-13
 Identities = 18/66 (27%), Positives = 28/66 (42%), Gaps = 6/66 (9%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH----SDIRPFICDRCPRSYRQLCTL 79
            R H+GEKPY C    C K F +   L  H   +         F+C +C +++ +  T+
Sbjct: 6  SGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTM 63

Query: 80 NVHKKT 85
            H   
Sbjct: 64 ARHADN 69

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 49.8 bits (120), Expect = 4e-09
 Identities = 10/63 (15%), Positives = 20/63 (31%), Gaps = 6/63 (9%)

Query: 11 CKISFASATNYKNHMRIHSGE----KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          C  +F        H + +         +VC    C K FT  +++ +H    +       
Sbjct: 21 CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCS--KCGKTFTRRNTMARHADNCAGPDGVEG 78

Query: 67 DRC 69
          +  
Sbjct: 79 ENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 4/35 (11%), Positives = 8/35 (22%), Gaps = 2/35 (5%)

Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRF 45
          C  +F        H    +G      +  +     
Sbjct: 53 CGKTFTRRNTMARHADNCAGPDGVEGE--NSGPSS 85

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 63.6 bits (156), Expect = 1e-13
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 13 ISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRS 72
          IS   +++      +  GEKPY C   +C K F+    L +H   H+  +P+ C  C +S
Sbjct: 1  ISEFGSSSSVAQAALEPGEKPYAC--PECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKS 58

Query: 73 YRQLCTLNVHKKT 85
          +     L  H++T
Sbjct: 59 FSDKKDLTRHQRT 71

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 63.6 bits (156), Expect = 2e-13
 Identities = 26/76 (34%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 10  DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
           +C  SF+   N + H R H+GEKPY C   +C K F++ + L  H   H+  +P+ C  C
Sbjct: 82  ECGKSFSQRANLRAHQRTHTGEKPYAC--PECGKSFSQLAHLRAHQRTHTGEKPYKCPEC 139

Query: 70  PRSYRQLCTLNVHKKT 85
            +S+ +   L+ H++T
Sbjct: 140 GKSFSREDNLHTHQRT 155

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 63.2 bits (155), Expect = 2e-13
 Identities = 27/76 (35%), Positives = 44/76 (57%), Gaps = 2/76 (2%)

Query: 10  DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
           +C  SF+   + + H R H+GEKPY C   +C K F+   +L+ H   H+  +P+ C  C
Sbjct: 110 ECGKSFSQLAHLRAHQRTHTGEKPYKC--PECGKSFSREDNLHTHQRTHTGEKPYKCPEC 167

Query: 70  PRSYRQLCTLNVHKKT 85
            +S+ +   LNVH++T
Sbjct: 168 GKSFSRRDALNVHQRT 183

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 62.5 bits (153), Expect = 4e-13
 Identities = 27/76 (35%), Positives = 43/76 (56%), Gaps = 2/76 (2%)

Query: 10  DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
           +C  SF+   +   H R H+GEKPY C   +C K F++ ++L  H   H+  +P+ C  C
Sbjct: 54  ECGKSFSDKKDLTRHQRTHTGEKPYKC--PECGKSFSQRANLRAHQRTHTGEKPYACPEC 111

Query: 70  PRSYRQLCTLNVHKKT 85
            +S+ QL  L  H++T
Sbjct: 112 GKSFSQLAHLRAHQRT 127

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 62.5 bits (153), Expect = 5e-13
 Identities = 26/76 (34%), Positives = 42/76 (55%), Gaps = 2/76 (2%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
          +C  SF+ + +   H R H+GEKPY C   +C K F++   L +H   H+  +P+ C  C
Sbjct: 26 ECGKSFSRSDHLAEHQRTHTGEKPYKC--PECGKSFSDKKDLTRHQRTHTGEKPYKCPEC 83

Query: 70 PRSYRQLCTLNVHKKT 85
           +S+ Q   L  H++T
Sbjct: 84 GKSFSQRANLRAHQRT 99

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 48.6 bits (117), Expect = 6e-08
 Identities = 19/49 (38%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 10  DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
           +C  SF+   N   H R H+GEKPY C   +C K F+   +L  H   H
Sbjct: 138 ECGKSFSREDNLHTHQRTHTGEKPYKC--PECGKSFSRRDALNVHQRTH 184

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 59.8 bits (146), Expect = 3e-13
 Identities = 16/60 (26%), Positives = 24/60 (40%), Gaps = 2/60 (3%)

Query: 26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT 85
             S   P  C   +C    +  ++L  H  +H   RPF C+ C    +Q   L+ H K 
Sbjct: 2  SSGSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 14/48 (29%), Positives = 21/48 (43%), Gaps = 2/48 (4%)

Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
          C  S +S    + H RIH  ++P+ C    C     + S+L KH    
Sbjct: 15 CSYSCSSKAALRIHERIHCTDRPFKCN--YCSFDTKQPSNLSKHMKKF 60

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 58.6 bits (143), Expect = 1e-12
 Identities = 23/62 (37%), Positives = 34/62 (54%), Gaps = 2/62 (3%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHK 83
             IHSGEKPY C   +C K F+  S L +H  VH+  +P+ C  C +++ Q   L  H+
Sbjct: 5  SSGIHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62

Query: 84 KT 85
          + 
Sbjct: 63 RI 64

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF 64
          +C  +F+ ++    H R+H+GEKPY C   +C K F++ S L  H  +H+     
Sbjct: 19 ECGKAFSRSSILVQHQRVHTGEKPYKCL--ECGKAFSQNSGLINHQRIHTSGPSS 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.6 bits (143), Expect = 1e-12
 Identities = 17/62 (27%), Positives = 27/62 (43%), Gaps = 2/62 (3%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHK 83
                  + Y C   +C K F+  S L KH   H+  +P+ CD C +++ Q   L  H 
Sbjct: 9  SEWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH 66

Query: 84 KT 85
          + 
Sbjct: 67 RV 68

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.4 bits (114), Expect = 3e-08
 Identities = 20/49 (40%), Positives = 28/49 (57%), Gaps = 2/49 (4%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
          +C  SF+ +++   H R H+GEKPY C   +C K F + S L  H  VH
Sbjct: 23 ECGKSFSHSSDLSKHRRTHTGEKPYKCD--ECGKAFIQRSHLIGHHRVH 69

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 20/61 (32%), Positives = 28/61 (45%), Gaps = 3/61 (4%)

Query: 25 MRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKK 84
              SG+K Y CQ   C K FT  S   +H  +H  +RP+ C  C + ++    L  H K
Sbjct: 2  SSGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 58

Query: 85 T 85
           
Sbjct: 59 I 59

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 59.0 bits (144), Expect = 2e-12
 Identities = 21/73 (28%), Positives = 34/73 (46%), Gaps = 2/73 (2%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
           C  SF   +    HM +H G +PY C    C K+F     L  H  +H+ I+P+ C+ C
Sbjct: 14 QCGKSFTHKSQRDRHMSMHLGLRPYGCG--VCGKKFKMKHHLVGHMKIHTGIKPYECNIC 71

Query: 70 PRSYRQLCTLNVH 82
           + +    + + H
Sbjct: 72 AKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 54.8 bits (133), Expect = 7e-11
 Identities = 19/71 (26%), Positives = 31/71 (43%), Gaps = 4/71 (5%)

Query: 10  DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
            C   F    +   HM+IH+G KPY C    C KRF    S ++H  V S  + +   + 
Sbjct: 42  VCGKKFKMKHHLVGHMKIHTGIKPYECN--ICAKRFMWRDSFHRH--VTSCTKSYEAAKA 97

Query: 70  PRSYRQLCTLN 80
            ++  +    +
Sbjct: 98  EQNTTEASGPS 108

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 53.9 bits (130), Expect = 8e-11
 Identities = 16/57 (28%), Positives = 28/57 (49%)

Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
          +        C  ++  +++ K H R H+GEKP+ C  + C++RF     L +H   H
Sbjct: 16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 49.3 bits (118), Expect = 5e-09
 Identities = 17/70 (24%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 18 ATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD--RCPRSYRQ 75
          ++         S  + ++C    C K + + S L  HT  H+  +PF C    C R + +
Sbjct: 2  SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 76 LCTLNVHKKT 85
             L+ H++T
Sbjct: 62 SDELSRHRRT 71

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 51.6 bits (123), Expect = 6e-10
 Identities = 17/82 (20%), Positives = 31/82 (37%), Gaps = 10/82 (12%)

Query: 16 ASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQ 75
           S+ +     +IH G++   C    C   F   S+L +        +  +C++C +   Q
Sbjct: 1  GSSGSSGKRQKIHLGDRSQKCS--KCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQ 51

Query: 76 LCTLNVHKKTNHRESKNKKPSN 97
             LN  +       K   PS+
Sbjct: 52 EAALNKDEGN-ESGKKTSGPSS 72

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 6e-10
 Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKPY+C   +C K FT  S+L KH  +H+  +P   
Sbjct: 2  SSGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F   +N   H +IH+ +KP   
Sbjct: 17 ECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 1e-09
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 67
          +     SGEKP+ C+  +C K F   S  Y H   HS  +P    
Sbjct: 2  SSGSSGSGEKPFKCE--ECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQ 37
          +C   F + +   +H R HSGEKP    
Sbjct: 17 ECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.5 bits (119), Expect = 2e-09
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKPY C+  +C K F     LY H +VH+  +P   
Sbjct: 2  SSGSSGTGEKPYKCE--ECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C   F    +   H  +H+GEKP   
Sbjct: 17 ECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 2e-09
 Identities = 13/44 (29%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     S EKPY C+  DC K +    +L  H  VH   +    
Sbjct: 2  SSGSSGSVEKPYKCE--DCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 9/27 (33%), Positives = 11/27 (40%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          DC   +    N   H R+H GEK    
Sbjct: 17 DCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 2e-09
 Identities = 16/46 (34%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR 68
          +     +GEKPY C   DC K FT  S L  H   H+  R      
Sbjct: 2  SSGSSGTGEKPYKCS--DCGKSFTWKSRLRIHQKCHTGERHSGPSS 45

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          DC  SF   +  + H + H+GE+    
Sbjct: 17 DCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 2e-09
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEK Y C  ++C K F+    L KH  +HS  +P   
Sbjct: 2  SSGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  SF+ A     H R+HSGEKP   
Sbjct: 17 ECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 3e-09
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GE P++C   +C K FT  ++L  H  +H+  RP   
Sbjct: 2  SSGSSGTGENPFIC--SECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C   F   TN   H +IH+GE+P   
Sbjct: 17 ECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.1 bits (118), Expect = 3e-09
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     SGEKPY C   +C K F   S L  H   H+ +     
Sbjct: 2  SSGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 3e-09
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C    C K FT+ S L+ H  +H+  +P   
Sbjct: 3  SGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 6e-04
 Identities = 12/32 (37%), Positives = 17/32 (53%), Gaps = 3/32 (9%)

Query: 8  PWDCKI---SFASATNYKNHMRIHSGEKPYVC 36
          P++C I   SF   +    H +IH+GEKP   
Sbjct: 12 PYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 3e-09
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               SGEKPYVC    C K F   + L +H  +H+  +P   
Sbjct: 3  SGSSGSGEKPYVCD--YCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C  +F  +     H RIH+GEKP   
Sbjct: 17 YCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 3e-09
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 67
          +     +GEKP+ C    C K F   S L +H++VH+  +P    
Sbjct: 2  SSGSSGTGEKPFKCD--ICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.5 bits (83), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 11/27 (40%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C  SF   +    H  +H+ EKP   
Sbjct: 17 ICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 3e-09
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     SGEKP+ C+  +C KRFT+ S L+ H  VH+  +P   
Sbjct: 2  SSGSSGSGEKPFKCE--ECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 8e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C   F   +   +H R+H+GEKP   
Sbjct: 17 ECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 48.7 bits (117), Expect = 4e-09
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C  ++C K F   S L KH  VHS  +P   
Sbjct: 3  SGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  SF  A+    H R+HSGEKP   
Sbjct: 17 ECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 49.0 bits (118), Expect = 4e-09
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 5/50 (10%)

Query: 8  PWDCKI---SFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKH 54
           + C++   +FA   + K H R H+ EKPY C    C + FT    L +H
Sbjct: 2  SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCG--LCNRAFTRRDLLIRH 49

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.5 bits (96), Expect = 6e-06
 Identities = 14/56 (25%), Positives = 27/56 (48%), Gaps = 2/56 (3%)

Query: 32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNH 87
          + +VC+   C + F     L +H   H++ +P+ C  C R++ +   L  H +  H
Sbjct: 1  RSFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIH 54

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.6 bits (117), Expect = 4e-09
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GE+PY+C    C K FT+ S+L KH  +H+  +P   
Sbjct: 3  SGSSGTGERPYICT--VCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQ 37
           C  +F   +N   H +IH+GEKP    
Sbjct: 17 VCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-09
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 67
               +GEKP+ C  ++C   F+   SL+KH   H    P    
Sbjct: 3  SGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 8/32 (25%), Positives = 14/32 (43%), Gaps = 3/32 (9%)

Query: 8  PWDCKI---SFASATNYKNHMRIHSGEKPYVC 36
          P+ CK    +F+ + +   H+R H    P   
Sbjct: 12 PFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 4e-09
 Identities = 16/44 (36%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKPY C   DC K FT  S L+ H   H+  R    
Sbjct: 2  SSGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 7/27 (25%), Positives = 12/27 (44%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          DC  +F   +    H + H+GE+    
Sbjct: 17 DCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-09
 Identities = 15/44 (34%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKPY C   +C K F+  S L  H   HS  +P   
Sbjct: 2  SSGSSGAGEKPYGC--SECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 12/27 (44%), Positives = 16/27 (59%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F+S +    HMR HSGEKP   
Sbjct: 17 ECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 5e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C    C K F+   SL  H  +HS  +P   
Sbjct: 3  SGSSGTGEKPYEC--SVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C  +F+   +   H RIHSG+KP   
Sbjct: 17 VCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-09
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C   DC K F + S L+ H  +H+   P   
Sbjct: 3  SGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          DC  SF   +    H RIH+GE P   
Sbjct: 17 DCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-09
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               SGE+PY C   +C K F  +S L +H   H   +    
Sbjct: 3  SGSSGSGERPYGCN--ECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 6/27 (22%), Positives = 12/27 (44%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F   ++   H++ H  EK    
Sbjct: 17 ECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 6e-09
 Identities = 15/43 (34%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C   +C K FT+ S+L+ H  +H+  +P   
Sbjct: 3  SGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F   +N   H +IH+GEKP   
Sbjct: 17 ECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-09
 Identities = 17/43 (39%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               SGEKP+ C+  +C KRFT+ S L+ H  VH+  +P   
Sbjct: 3  SGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.0 bits (115), Expect = 7e-09
 Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKPY C   +C K F + SS  +H  +H+  RP   
Sbjct: 2  SSGSSGTGEKPYKCM--ECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 7/27 (25%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F   ++   H R+H+G++P   
Sbjct: 17 ECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-09
 Identities = 13/46 (28%), Positives = 18/46 (39%), Gaps = 2/46 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR 68
          +     +GEKPY C    C K F   + L +H  VH+         
Sbjct: 2  SSGSSGTGEKPYSC--NVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 7/32 (21%), Positives = 15/32 (46%), Gaps = 3/32 (9%)

Query: 8  PWDCKI---SFASATNYKNHMRIHSGEKPYVC 36
          P+ C +   +F  + +   H+R+H+ E     
Sbjct: 12 PYSCNVCGKAFVLSAHLNQHLRVHTQETLSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 7e-09
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKP+ C   DC K F+++  L +H  +H+  +P   
Sbjct: 3  SGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          DC  +F+       H RIH+GEKP   
Sbjct: 17 DCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.9 bits (115), Expect = 7e-09
 Identities = 15/41 (36%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF 64
                GEKPY C    C K F++  SL  H  VH+   P 
Sbjct: 2  SSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTGSGPS 40

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 8e-09
 Identities = 18/43 (41%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY CQ   C K F   S L +H  VHS  RP   
Sbjct: 3  SGSSGTGEKPYKCQ--VCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 6e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C  +F  +++   H  +HSGE+P   
Sbjct: 17 VCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.9 bits (115), Expect = 8e-09
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +G KPYVC   +C K F   S L  HT  H+       
Sbjct: 2  SSGSSGTGMKPYVC--NECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F S +    H R H+GE     
Sbjct: 17 ECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 8e-09
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C    C K F+  SSL  H  +H+  +P   
Sbjct: 3  SGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C  +F+  ++   H  IH+G+KP   
Sbjct: 17 QCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 47.9 bits (115), Expect = 9e-09
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKP+ C   +C K F+  S L  H  +H+  +P   
Sbjct: 3  SGSSGTGEKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 35.9 bits (84), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  SF+ ++    H RIH+GEKP   
Sbjct: 17 ECGKSFSISSQLATHQRIHTGEKPSGP 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.9 bits (115), Expect = 9e-09
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C   +CQK F   S+L  H   H+       
Sbjct: 3  SGSSGTGEKPYECN--ECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.9 bits (84), Expect = 3e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C+ +F + +N   H R H+GE     
Sbjct: 17 ECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 47.9 bits (115), Expect = 9e-09
 Identities = 13/44 (29%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKP+ C   +C K F+  S+L  H  +H+  +P   
Sbjct: 2  SSGSSGTGEKPFKCV--ECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C   F+  +    H ++H+GEKP   
Sbjct: 17 ECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +G KPY+C   +C K F+ YSSL  H ++H+  +P   
Sbjct: 2  SSGSSGTGVKPYMCN--ECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GE+ Y C   +C K F   S+L  H  +H+  +P   
Sbjct: 3  SGSSGTGERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +FA  +    H RIH+GEKP   
Sbjct: 17 ECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C    C+K F+ ++SL +H  VHS  +P   
Sbjct: 3  SGSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C+ +F+   +   H R+HSGEKP   
Sbjct: 17 VCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +G++PY C   +C K F   SSL  H   H+  +P   
Sbjct: 3  SGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 67
          +     SGEKPY C   +C K +     L  H  VH+  +     
Sbjct: 2  SSGSSGSGEKPYKCV--ECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 7/27 (25%), Positives = 12/27 (44%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C   +    +   H R+H+GEK    
Sbjct: 17 ECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 47.6 bits (114), Expect = 1e-08
 Identities = 16/54 (29%), Positives = 20/54 (37%), Gaps = 3/54 (5%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHT-LVHSDIRPFICDRCPRSYRQ 75
          +     S  KPY+CQ   C K F+    L  H   VH+  RP  C         
Sbjct: 2  SSGSSGSVGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 39.1 bits (92), Expect = 2e-05
 Identities = 9/38 (23%), Positives = 18/38 (47%), Gaps = 3/38 (7%)

Query: 10 DCKISFASATNYKNHM-RIHSGEKPYVCQVRDCQKRFT 46
           C   F+   +   H+ ++H+ E+P+ CQV       +
Sbjct: 17 SCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPS 52

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 14/44 (31%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKPY C   +C K F++ S L +H  +H+  +P   
Sbjct: 2  SSGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F+  +    H RIH+GEKP   
Sbjct: 17 ECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 1e-08
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKP+ C  R+C K F+  S L  H  +H+   P   
Sbjct: 3  SGSSGTGEKPHEC--RECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 6e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  SF+  +    H RIH+GE P   
Sbjct: 17 ECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C   +C K F   SSL  H   HS  +P   
Sbjct: 3  SGSSGTGEKPYKCN--ECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F + ++   H   HSGEKP   
Sbjct: 17 ECGKAFRARSSLAIHQATHSGEKPSGP 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
                GEKPY C+   C  RF + + L  H L+H
Sbjct: 2  SSGSSGGEKPYKCE--TCGARFVQVAHLRAHVLIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.7 bits (86), Expect = 1e-04
 Identities = 7/25 (28%), Positives = 11/25 (44%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPY 34
           C   F    + + H+ IH+G  P 
Sbjct: 16 TCGARFVQVAHLRAHVLIHTGSGPS 40

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               SGEKPY C   +C K F++ S L  H   H+  +P   
Sbjct: 3  SGSSGSGEKPYGCN--ECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F+  +    H R H+GEKP   
Sbjct: 17 ECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 11/44 (25%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GE+P+ C   +C K F + + L +H  +H+  +P   
Sbjct: 2  SSGSSGTGERPHKCN--ECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  SF  + +   H RIH+GEKP   
Sbjct: 17 ECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GE+ Y C   +C K F + S+L  H  +H   +P   
Sbjct: 3  SGSSGTGERHYECS--ECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 6e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F   +    H RIH GEKP   
Sbjct: 17 ECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +G KPY C   +C K F++ S L +H  VH+  +P   
Sbjct: 3  SGSSGTGGKPYQCN--ECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F+  +    H R+H+GEKP   
Sbjct: 17 ECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +G K + C   +C K FT  S+L  H  +H+  +P   
Sbjct: 2  SSGSSGTGGKHFEC--TECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 6e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F   +    H +IH+GEKP   
Sbjct: 17 ECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKP+ C   +CQK F   S+L  H   H+  +P   
Sbjct: 2  SSGSSGTGEKPFEC--SECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 8e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C+ +F + +N   H R H+GEKP   
Sbjct: 17 ECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C+   C K +    +L  H  VH+  RP   
Sbjct: 3  SGSSGTGEKPYKCE--KCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C   + S  N   H ++H+GE+P   
Sbjct: 17 KCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 14/43 (32%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C  ++C K F++ + L +H  VH+  +P   
Sbjct: 3  SGSSGTGEKPYEC--KECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F+  T+   H R+H+GEKP   
Sbjct: 17 ECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C   +C K F   S L +H  +H+  +P   
Sbjct: 3  SGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F   +  + H RIH+GEKP   
Sbjct: 17 ECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
                GEK Y C    C K F++ S L  H  VH+  +P   
Sbjct: 3  SGSSGMGEKCYKCD--VCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.4 bits (80), Expect = 8e-04
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C   F+ +++ + H R+H+GEKP   
Sbjct: 17 VCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +G KPY C    C K F+  S L  H   H+ ++P   
Sbjct: 2  SSGSSGTGVKPYGC--SQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 2e-08
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C+   C K FT+ + L +H   H+  +P   
Sbjct: 3  SGSSGTGEKPYECK--VCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C  +F    +   H + H+GEKP   
Sbjct: 17 VCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 2e-08
 Identities = 13/43 (30%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +G+K + C   +C+K FT+ SSL  H  +H+  +P   
Sbjct: 3  SGSSGAGKKLFKCN--ECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +CK +F  +++   H RIH+GEKP   
Sbjct: 17 ECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 16/44 (36%), Positives = 22/44 (50%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     SGEKPY C   +C K FT+ S L  H  +H+  +P   
Sbjct: 2  SSGSSGSGEKPYKCN--ECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 15/44 (34%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKPY C   +C K FT+ S L +H  +H+  +P   
Sbjct: 2  SSGSSGTGEKPYKCN--ECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 3e-08
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C    C K F   SSL  H  +H+  +P   
Sbjct: 3  SGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQ 37
           C  SF   ++   H RIH+GEKP    
Sbjct: 17 VCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 3e-08
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               SGEKP+ C+  +C K F +   L  H  +H+  +P   
Sbjct: 3  SGSSGSGEKPFKCK--ECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 10/27 (37%), Positives = 16/27 (59%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F    +  +H+RIH+GEKP   
Sbjct: 17 ECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 4e-08
 Identities = 13/44 (29%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKPY C   +C K F + ++L +H  +H+  +P   
Sbjct: 2  SSGSSGTGEKPYRCG--ECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +FA   N   H RIH+GEKP   
Sbjct: 17 ECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 10/44 (22%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +G+KP+ C    C K F    +L  H  +H+  +    
Sbjct: 2  SSGSSGTGQKPFECT--HCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C  SF +  N   H RIH+GEK    
Sbjct: 17 HCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GE PY C   +C K F+    L  H   H+  +P   
Sbjct: 3  SGSSGTGENPYEC--HECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F+      +H R H+GEKP   
Sbjct: 17 ECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.0 bits (110), Expect = 4e-08
 Identities = 11/44 (25%), Positives = 20/44 (45%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +      GE+ + C   DC K F + S+  +H  +H+  +P   
Sbjct: 2  SSGSSGHGERGHRC--SDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 13/27 (48%), Positives = 16/27 (59%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          DC   F  A+N+  H RIH+GEKP   
Sbjct: 17 DCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 14/44 (31%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     +GEKPY C   +C K F   S L +H  +H+  +P   
Sbjct: 2  SSGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C   F   +    H RIH+GEKP   
Sbjct: 17 ECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 5e-08
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               SGEKPY C   +C K F  ++ L +H  +H+  RP   
Sbjct: 3  SGSSGSGEKPYKCS--ECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 6e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F   T+   H RIH+G +P   
Sbjct: 17 ECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 45.6 bits (109), Expect = 6e-08
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 3/45 (6%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHT-LVHSDIRPFIC 66
          +     +G+KPY C   +C K F + +SL +H    H+  +P   
Sbjct: 2  SSGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-08
 Identities = 12/43 (27%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKP+ C   +C K + +   L +H  VH+  +P   
Sbjct: 3  SGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  S+    +   H R+H+GEKP   
Sbjct: 17 ECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 6e-08
 Identities = 16/43 (37%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C   +C K FT+ S L +H  VH+  +P   
Sbjct: 3  SGSSGTGEKPYKCN--ECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 13/45 (28%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR 68
                GEK + C+  +C   F++ SSL  H  VH   +P     
Sbjct: 3  SGSSGMGEKTWKCR--ECDMCFSQASSLRLHQNVHVGEKPSGPSS 45

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 16/27 (59%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C + F+ A++ + H  +H GEKP   
Sbjct: 17 ECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +G+KPY C   +C K FT+ S L +H  +H+  +P   
Sbjct: 3  SGSSGTGKKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 7e-08
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY+C   +C K F + S L +H  +H+  +P   
Sbjct: 3  SGSSGTGEKPYICN--ECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  SF   ++   H RIH+GEKP   
Sbjct: 17 ECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.3 bits (108), Expect = 8e-08
 Identities = 14/41 (34%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF 64
                GE PY+C    C K FT+  SL  H    S   P 
Sbjct: 2  SSGSSGGETPYLCG--QCGKSFTQRGSLAVHQRSCSQSGPS 40

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 9e-08
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C   +C K FT+ S L  H  +H+ ++P   
Sbjct: 3  SGSSGTGEKPYKCN--ECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 8e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C   F   ++  NH RIH+G KP   
Sbjct: 17 ECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 45.2 bits (108), Expect = 9e-08
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEK Y C   +C K F+  S L +H  +H+  +P   
Sbjct: 3  SGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 34.8 bits (81), Expect = 6e-04
 Identities = 9/27 (33%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C   F+  +    H +IH+GEKP   
Sbjct: 17 ECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 9e-08
 Identities = 14/43 (32%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C   +C K F  +S+L  H ++H+  +P   
Sbjct: 3  SGSSGTGEKPYKCN--ECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 5e-04
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F + +N   H  IH+GEKP   
Sbjct: 17 ECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 9e-08
 Identities = 15/43 (34%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C   +C K FT+ S L +H  +H+  +P   
Sbjct: 3  SGSSGTGEKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 44.8 bits (107), Expect = 9e-08
 Identities = 13/41 (31%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF 64
                GEKPY C++  C  RF    +L  H  +H+   P 
Sbjct: 2  SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.2 bits (95), Expect = 6e-06
 Identities = 11/30 (36%), Positives = 16/30 (53%), Gaps = 3/30 (10%)

Query: 8  PWDCKI---SFASATNYKNHMRIHSGEKPY 34
          P+ C+I    F      K+H+RIH+G  P 
Sbjct: 11 PYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKPY C   +C K F   S L +H L+H+  +P   
Sbjct: 3  SGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 1e-07
 Identities = 13/36 (36%), Positives = 16/36 (44%), Gaps = 2/36 (5%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
               SGEK + C   +C K F   S+L  H  VH 
Sbjct: 3  SGSSGSGEKSHTCD--ECGKNFCYISALRIHQRVHM 36

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.9 bits (107), Expect = 1e-07
 Identities = 13/43 (30%), Positives = 16/43 (37%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GEKP  C   +C K F   S L  H   H D +    
Sbjct: 3  SGSSGTGEKPCKC--TECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 11/43 (25%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +G  PY C    C+K F+    L  H  +H+  +P   
Sbjct: 3  SGSSGAGVNPYKCS--QCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 35.6 bits (83), Expect = 3e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C+ SF+       H R+H+ EKP   
Sbjct: 17 QCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               SG+KPY C+  +C+K F +   L +H  VH+  R    
Sbjct: 3  SGSSGSGKKPYECK--ECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 9/32 (28%), Positives = 16/32 (50%), Gaps = 3/32 (9%)

Query: 8  PWDCKI---SFASATNYKNHMRIHSGEKPYVC 36
          P++CK    +F    +   H R+H+GE+    
Sbjct: 12 PYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
                GEKPY C   +C K F+    L +H + H+  +P   
Sbjct: 3  SGSSGEGEKPYQCS--ECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  SF+ +     H   H+ EKP   
Sbjct: 17 ECGKSFSGSYRLTQHWITHTREKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 2e-07
 Identities = 11/44 (25%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
          +     S  K + C   +C + FT  S L +H  +H+  +P   
Sbjct: 2  SSGSSGSSTKSHQC--HECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.5 bits (107), Expect = 3e-07
 Identities = 17/86 (19%), Positives = 28/86 (32%), Gaps = 4/86 (4%)

Query: 10  DCKISFASATNYKNHMRI--HSGEKPYVC-QVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
           DC  ++ +      HM    H  +  +        +       SL +        +   C
Sbjct: 24  DCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC 83

Query: 67  DRCPRSYRQLCTLNVH-KKTNHRESK 91
             C  S+  L  L+VH  KT H +  
Sbjct: 84  MYCGHSFESLQDLSVHMIKTKHYQKV 109

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 36.7 bits (84), Expect = 5e-04
 Identities = 15/52 (28%), Positives = 21/52 (40%), Gaps = 1/52 (1%)

Query: 49 SSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVH-KKTNHRESKNKKPSNRN 99
          SS   +  + +    F C  C  +Y  L  L VH  +T H    N +  N N
Sbjct: 5  SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNN 56

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 3e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               SGE+P+ C   +C K F   S L  H  +HS  +    
Sbjct: 3  SGSSGSGERPFKCN--ECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 34.8 bits (81), Expect = 7e-04
 Identities = 8/27 (29%), Positives = 13/27 (48%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C   F   ++   H+R+HS EK    
Sbjct: 17 ECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 12/43 (27%), Positives = 15/43 (34%), Gaps = 2/43 (4%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
               +GE PY C   +C K F+    L  H   HS       
Sbjct: 3  SGSSGTGENPYEC--CECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 43.3 bits (103), Expect = 4e-07
 Identities = 12/41 (29%), Positives = 14/41 (34%), Gaps = 2/41 (4%)

Query: 26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
             SGE PY C   +C K F     L  H   H+       
Sbjct: 3  SGSSGENPYECS--ECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 34.4 bits (80), Expect = 8e-04
 Identities = 7/27 (25%), Positives = 11/27 (40%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
          +C  +F       +H R H+GE     
Sbjct: 15 ECGKAFNRKDQLISHQRTHAGESGPSS 41

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.0 bits (102), Expect = 7e-07
 Identities = 10/36 (27%), Positives = 15/36 (41%), Gaps = 2/36 (5%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
               +  K Y C   +C K FT    L +H  +H+
Sbjct: 3  SGSSGTDSKSYNCN--ECGKAFTRIFHLTRHQKIHT 36

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.4 bits (98), Expect = 2e-06
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC 66
             SGEKP+ C    C+K F+  S L  H   H++ +P   
Sbjct: 3  SGSSGEKPFGC--SCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 35.2 bits (82), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVC 36
           C+ +F+S +    H + H+ EKP   
Sbjct: 15 CCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.0 bits (98), Expect = 2e-06
 Identities = 19/58 (32%), Positives = 29/58 (50%), Gaps = 2/58 (3%)

Query: 34 YVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESK 91
          Y+C+  +C  R  + S L KH   H+D+RP+ C  C  S++    L  H K+     K
Sbjct: 2  YICE--ECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.9 bits (90), Expect = 2e-05
 Identities = 14/49 (28%), Positives = 20/49 (40%), Gaps = 2/49 (4%)

Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          C I     +  K H+R H+  +PY C    C   F    +L KH    +
Sbjct: 7  CGIRXKKPSMLKKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKSKA 53

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 40.4 bits (95), Expect = 4e-06
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
            R  +G KP+ C   DC + F+    L  H   H
Sbjct: 2  STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRH 34

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.1 bits (96), Expect = 1e-05
 Identities = 14/64 (21%), Positives = 22/64 (34%), Gaps = 7/64 (10%)

Query: 10 DCKISFASATNYKNHM-RIHSGEKP---YVCQVRDCQ---KRFTEYSSLYKHTLVHSDIR 62
           C  +F++      H+   H G      +VC   +C    K F     L  H  VH+  +
Sbjct: 30 SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEK 89

Query: 63 PFIC 66
              
Sbjct: 90 SGPS 93

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.6 bits (93), Expect = 1e-05
 Identities = 12/34 (35%), Positives = 21/34 (61%), Gaps = 2/34 (5%)

Query: 26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
             SGEKPY C   +C++ F++ + L +H  +H+
Sbjct: 3  SGSSGEKPYSCA--ECKETFSDNNRLVQHQKMHT 34

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 38.4 bits (89), Expect = 4e-05
 Identities = 11/44 (25%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC 69
                K   C++  C K F +   L +H L HS  +P+     
Sbjct: 5  SSGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 35.7 bits (82), Expect = 4e-04
 Identities = 10/26 (38%), Positives = 11/26 (42%)

Query: 11 CKISFASATNYKNHMRIHSGEKPYVC 36
          C   F    +   H   HSGEKPY  
Sbjct: 18 CGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 37.5 bits (87), Expect = 7e-05
 Identities = 10/38 (26%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD 60
          +     +GE P+ C    C + FT+ + L +H   H+ 
Sbjct: 2  SSGSSGAGENPFKCS--KCDRVFTQRNYLVQHERTHAR 37

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.8 bits (86), Expect = 1e-04
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF 64
             SG++ Y CQ  +C K F +  SL  H  +H+   P 
Sbjct: 3  SGSSGQRVYECQ--ECGKSFRQKGSLTLHERIHTGSGPS 39

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.4 bits (88), Expect = 1e-04
 Identities = 12/78 (15%), Positives = 23/78 (29%), Gaps = 4/78 (5%)

Query: 11  CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
                   ++Y   +        +VC +  C   F+   SL +H          +C  C 
Sbjct: 52  HNPQLLDESSYLYRLLASKAISQFVCPL--CLMPFSSSVSLKQHIRYTE--HTKVCPVCK 107

Query: 71  RSYRQLCTLNVHKKTNHR 88
           + +    +   H    H 
Sbjct: 108 KEFTSTDSALDHVCKKHN 125

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 38.0 bits (87), Expect = 2e-04
 Identities = 15/79 (18%), Positives = 28/79 (35%), Gaps = 5/79 (6%)

Query: 11 CKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP 70
          C    +S     +H R+       VC    C  RF       +H     + +   C  C 
Sbjct: 22 CNAKLSSLLEQGSHERLC--RNAAVCPY--CSLRFFSPELKQEHE-SKCEYKKLTCLECM 76

Query: 71 RSYRQLCTLNVHKKTNHRE 89
          R+++   ++  H+   H +
Sbjct: 77 RTFKSSFSIWRHQVEVHNQ 95

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	154
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.94
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.92
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.91
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.9
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.89
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.88
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.88
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.88
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.88
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.87
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.86
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.86
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.86
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.86
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.86
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.85
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.85
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.85
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.85
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.84
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.84
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.84
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.83
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.83
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.81
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.77
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.77
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.76
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.74
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.74
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.74
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.73
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.73
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.73
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.73
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.72
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.72
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.71
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.7
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.7
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.7
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.69
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.68
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.68
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.67
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.66
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.66
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.65
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.65
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.64
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.64
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.64
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.64
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.63
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.63
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.62
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.62
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.6
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.6
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.6
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.59
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.59
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.57
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.57
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.57
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.55
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.55
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.55
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.54
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.54
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.53
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.53
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.52
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.51
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.5
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.48
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.47
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.46
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.46
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.45
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.45
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.45
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.45
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.45
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.45
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.45
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.45
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.45
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.45
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.44
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.44
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.44
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.44
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.44
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.44
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.44
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.44
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.44
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.44
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.43
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.43
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.43
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.42
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.42
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.4
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.39
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.39
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.39
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.36
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.36
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.36
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.35
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.34
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.34
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.32
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.32
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.31
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.3
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.3
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.3
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.29
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.29
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.29
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.29
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.29
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.29
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.28
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.27
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.26
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.25
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.25
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.23
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.22
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.22
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.22
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.21
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.21
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.21
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.2
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.2
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.2
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.19
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.19
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.19
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.19
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.18
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.18
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.18
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.18
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.18
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.18
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.18
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.18
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.17
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.17
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.16
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.16
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.15
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.13
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.13
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.11
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.1
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.06
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.03
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.02
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	99.02
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	99.0
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	99.0
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.99
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.98
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.97
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.96
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.95
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.95
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.93
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.92
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.9
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.89
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.89
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.87
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.87
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.85
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.83
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.82
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.81
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.8
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.79
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.78
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.77
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.76
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.75
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.7
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.7
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.7
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.69
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.68
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.68
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.68
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.68
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.68
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.67
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.65
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.65
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.65
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.64
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.64
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.64
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.63
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.63
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.61
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.6
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	98.02
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.59
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.59
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.57
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.99
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.98
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.56
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.56
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.56
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.55
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.95
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.5
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.87
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.46
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.46
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.44
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.78
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.33
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.68
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.41
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.98
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.86
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.24
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.03
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	95.33
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.2
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	93.2
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	91.77
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.21
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	90.44
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	90.27
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	88.96
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.61
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	87.33
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	85.92
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	85.06
2czr_A	226	TBP-interacting protein; tata-binding protein (TBP	83.69
3sp4_A	204	Aprataxin-like protein; HIT domain, zinc finger, D	82.11
2ct5_A	73	Zinc finger BED domain containing protein 1; DREF	81.64
2i5o_A	39	DNA polymerase ETA; zinc finger, DNA polymerase,PO	80.46
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	80.2
4i1l_A	93	Scurfin, forkhead box protein P3; FOXP3, dimerizat	80.15

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.94  E-value=1.2e-26  Score=148.23  Aligned_cols=88  Identities=28%  Similarity=0.504  Sum_probs=84.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      |++|+|.  .||+.|.....|..|+++|+++++|.|..  |++.|.....|..|+++|++++||.|+.||+.|.....|.
T Consensus        20 ek~y~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~   95 (133)
T 2lt7_A           20 RVYYICI--VCKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMS   95 (133)
T ss_dssp             EEEEEET--TTCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHH
T ss_pred             CcCeECC--CCCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHH
Confidence            4789999  99999999999999999999999999998  9999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCcCCC
Q psy6598          81 VHKKTNHRESKN   92 (154)
Q Consensus        81 ~H~~~~~~~~~~   92 (154)
                      .|+++||++.+.
T Consensus        96 ~H~~~hh~~~p~  107 (133)
T 2lt7_A           96 SHIKSVHSQDPS  107 (133)
T ss_dssp             HHHHHHTCCCTT
T ss_pred             HHhHHhcCCCCC
Confidence            999999987654

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.92  E-value=1e-24  Score=130.14  Aligned_cols=88  Identities=28%  Similarity=0.650  Sum_probs=81.7

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      +++|.|.+..|++.|.....|..|++.|.++++|.|..  |++.|.....|..|+++|.++++|.|..|++.|.+...|.
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   79 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERK   79 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHH
Confidence            68999983359999999999999999999999999998  9999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCcC
Q psy6598          81 VHKKTNHRES   90 (154)
Q Consensus        81 ~H~~~~~~~~   90 (154)
                      .|+++|++++
T Consensus        80 ~H~~~H~~~k   89 (90)
T 1a1h_A           80 RHTKIHLRQK   89 (90)
T ss_dssp             HHHGGGGC--
T ss_pred             HHHHHhcccC
Confidence            9999998764

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.91  E-value=2.9e-24  Score=131.94  Aligned_cols=90  Identities=33%  Similarity=0.624  Sum_probs=85.8

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++|.++++|.|..|++.|.....|.
T Consensus        15 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           15 KKEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCBCS--SSCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CcCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            4789999  99999999999999999999999999998  9999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCcCCCCC
Q psy6598          81 VHKKTNHRESKNKK   94 (154)
Q Consensus        81 ~H~~~~~~~~~~~~   94 (154)
                      .|+++|++++.+..
T Consensus        91 ~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           91 VHKTLHMQTSSPTA  104 (106)
T ss_dssp             HHHHHTTSCCCCCC
T ss_pred             HHHHHhCCCCCCcC
Confidence            99999998876643

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=2.5e-24  Score=129.94  Aligned_cols=88  Identities=38%  Similarity=0.650  Sum_probs=84.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|..  |++.|.....|..|++.|.++++|.|..|++.|.....|.
T Consensus         6 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   81 (96)
T 2dmd_A            6 SGPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLT   81 (96)
T ss_dssp             CCCCCBT--TTTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHH
T ss_pred             CcCeECC--CCCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHH
Confidence            5799999  99999999999999999999999999988  9999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCcCCC
Q psy6598          81 VHKKTNHRESKN   92 (154)
Q Consensus        81 ~H~~~~~~~~~~   92 (154)
                      .|+++|+++..+
T Consensus        82 ~H~~~h~~~~~p   93 (96)
T 2dmd_A           82 VHLRSHTGDSGP   93 (96)
T ss_dssp             HHHTTCCSCCCC
T ss_pred             HHHHHhcCCCCC
Confidence            999999987654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=7.5e-24  Score=132.47  Aligned_cols=110  Identities=27%  Similarity=0.609  Sum_probs=98.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      +++|.|.++.|++.|.....|..|++.|.++++|.|.++.|++.|.....|..|++.|.++++|.|..|++.|.....|.
T Consensus         4 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   83 (119)
T 2jp9_A            4 KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK   83 (119)
T ss_dssp             SCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHH
T ss_pred             CeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHH
Confidence            58999993339999999999999999999999999983349999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCcCCCCC--CCCCcchhhhHHhhhh
Q psy6598          81 VHKKTNHRESKNKK--PSNRNNIVKQECVQKI  110 (154)
Q Consensus        81 ~H~~~~~~~~~~~~--~~~~~~~~~~~~~~~~  110 (154)
                      .|+++|+++..+.+  +.+...+.....+..+
T Consensus        84 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H  115 (119)
T 2jp9_A           84 THTRTHTGEKPFSCRWPSCQKKFARSDELVRH  115 (119)
T ss_dssp             HHHHHHHTCCCEECCSTTCCCEESSHHHHHHH
T ss_pred             HHHHHhcCCCCeeCCCCCCccccCCHHHHHHH
Confidence            99999999999888  6788877776655543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.90  E-value=7.3e-24  Score=124.20  Aligned_cols=82  Identities=33%  Similarity=0.660  Sum_probs=79.2

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVH   82 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   82 (154)
                      ||.|.  .|++.|.....|..|++.|.++++|.|..  |++.|.....|..|++.|.++++|.|..|++.|.+...|..|
T Consensus         1 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   76 (82)
T 2kmk_A            1 SFDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH   76 (82)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHH
T ss_pred             CccCC--CCcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHH
Confidence            69999  99999999999999999999999999988  999999999999999999999999999999999999999999


Q ss_pred             HHhhcC
Q psy6598          83 KKTNHR   88 (154)
Q Consensus        83 ~~~~~~   88 (154)
                      +++|++
T Consensus        77 ~~~H~g   82 (82)
T 2kmk_A           77 SRKHTG   82 (82)
T ss_dssp             HHHHC-
T ss_pred             HHhhCC
Confidence            999864

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.89  E-value=3.7e-23  Score=125.59  Aligned_cols=88  Identities=30%  Similarity=0.605  Sum_probs=81.3

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      +++|.|.++.|++.|.....|..|++.|.++++|.|.+..|++.|.....|..|+++|.++++|.|..|++.|.....|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            46899994459999999999999999999999999963349999999999999999999999999999999999999999


Q ss_pred             HHHHhhcC
Q psy6598          81 VHKKTNHR   88 (154)
Q Consensus        81 ~H~~~~~~   88 (154)
                      .|+++|++
T Consensus        93 ~H~~~H~~  100 (100)
T 2ebt_A           93 LHMKRHQN  100 (100)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhCC
Confidence            99999864

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.89  E-value=8.7e-23  Score=128.39  Aligned_cols=107  Identities=24%  Similarity=0.396  Sum_probs=99.4

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhh---hcCCCceeCCCCcccccCch
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLV---HSDIRPFICDRCPRSYRQLC   77 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~   77 (154)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|..  |++.|.....|..|++.   |.++++|.|..|++.|....
T Consensus         5 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~   80 (124)
T 2dlq_A            5 SSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRM   80 (124)
T ss_dssp             CSSCCCT--TTCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHH
T ss_pred             CCCCCCC--CCCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHH
Confidence            4789999  99999999999999999999999999988  99999999999999985   57889999999999999999


Q ss_pred             hHHHHHHhhcCcCCCCCCCCCcchhhhHHhhhhc
Q psy6598          78 TLNVHKKTNHRESKNKKPSNRNNIVKQECVQKIN  111 (154)
Q Consensus        78 ~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (154)
                      .|..|++.|+++.++.+..+...+.....+..+.
T Consensus        81 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  114 (124)
T 2dlq_A           81 ELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHM  114 (124)
T ss_dssp             HHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHH
T ss_pred             HHHHHHHHcCCCCCccCCCccchhCCHHHHHHHH
Confidence            9999999999999999999998888877776654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=1.6e-22  Score=127.31  Aligned_cols=107  Identities=22%  Similarity=0.440  Sum_probs=93.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC--CcccccCchh
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR--CPRSYRQLCT   78 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~   78 (154)
                      +++|.|.+..|++.|.+...|..|++.| +.++|.|..  |++.|.....|..|++.|.++++|.|..  |++.|.....
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~   79 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFN   79 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHH
Confidence            4789998778999999999999999999 889999988  9999999999999999999999999986  9999999999


Q ss_pred             HHHHHHhhcCcCCCCCC--CCCcchhhhHHhhhh
Q psy6598          79 LNVHKKTNHRESKNKKP--SNRNNIVKQECVQKI  110 (154)
Q Consensus        79 l~~H~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  110 (154)
                      |..|++.|++++.+.+.  .+...+.....+..+
T Consensus        80 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H  113 (124)
T 1ubd_C           80 LRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH  113 (124)
T ss_dssp             HHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHH
T ss_pred             HHHHHHHhCCCCceECCCCCCCCccCCHHHHHHH
Confidence            99999999999998884  477766655444433

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.88  E-value=1.4e-22  Score=121.99  Aligned_cols=84  Identities=31%  Similarity=0.546  Sum_probs=79.3

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCC--CceeCCCCcccccCchh
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI--RPFICDRCPRSYRQLCT   78 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~   78 (154)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|..  |++.|.....|..|++.|.+.  ++|.|..|++.|.....
T Consensus         5 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~   80 (95)
T 2yt9_A            5 SSGVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDH   80 (95)
T ss_dssp             CSCEECS--SSCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHH
T ss_pred             CCCeECC--CCCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHH
Confidence            5799999  99999999999999999999999999998  999999999999999999987  99999999999999999


Q ss_pred             HHHHHHhhcC
Q psy6598          79 LNVHKKTNHR   88 (154)
Q Consensus        79 l~~H~~~~~~   88 (154)
                      |..|++..|.
T Consensus        81 L~~H~~~~H~   90 (95)
T 2yt9_A           81 LNGHIKQVHS   90 (95)
T ss_dssp             HHHHHHHTSC
T ss_pred             HHHHHHHhcC
Confidence            9999975443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.88  E-value=1.4e-22  Score=136.47  Aligned_cols=106  Identities=29%  Similarity=0.628  Sum_probs=77.0

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHH
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNV   81 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   81 (154)
                      ++|.|.  .|++.|.....|..|++.|.++++|.|..  |++.|.....|..|+++|.++++|.|+.|++.|.....|..
T Consensus        76 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~  151 (190)
T 2i13_A           76 KPYKCP--ECGKSFSQRANLRAHQRTHTGEKPYACPE--CGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHT  151 (190)
T ss_dssp             CCEECT--TTCCEESCHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             CCccCc--ccCCccCCHHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHH
Confidence            567777  77777777777777777777777777766  77777777777777777777777777777777777777777


Q ss_pred             HHHhhcCcCCCCCCCCCcchhhhHHhhhhc
Q psy6598          82 HKKTNHRESKNKKPSNRNNIVKQECVQKIN  111 (154)
Q Consensus        82 H~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (154)
                      |+++|++++++.+..+...+.....+..+.
T Consensus       152 H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~  181 (190)
T 2i13_A          152 HQRTHTGEKPYKCPECGKSFSRRDALNVHQ  181 (190)
T ss_dssp             HHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             HHHhcCCCCCeECCCCCCccCCHHHHHHHH
Confidence            777777777777777777666666555554

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.88  E-value=1.5e-22  Score=120.36  Aligned_cols=86  Identities=29%  Similarity=0.603  Sum_probs=79.3

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      .++|.|.++.|++.|.....|..|++.|.++++|.|.+..|++.|.....|..|++.|.++++|.|..|++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            36799992239999999999999999999999999963349999999999999999999999999999999999999999


Q ss_pred             HHHHhh
Q psy6598          81 VHKKTN   86 (154)
Q Consensus        81 ~H~~~~   86 (154)
                      .|+++|
T Consensus        83 ~H~~~H   88 (89)
T 2wbs_A           83 LHMKRH   88 (89)
T ss_dssp             HHGGGG
T ss_pred             HHHHhh
Confidence            999987

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.88  E-value=1.3e-22  Score=127.79  Aligned_cols=90  Identities=29%  Similarity=0.627  Sum_probs=80.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC--CCcccccCchh
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD--RCPRSYRQLCT   78 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~   78 (154)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|.+..|++.|.....|..|+++|.++++|.|+  .|++.|.+...
T Consensus        32 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  109 (124)
T 1ubd_C           32 PRVHVCA--ECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTN  109 (124)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTT
T ss_pred             CCCeECC--CCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHH
Confidence            4789999  9999999999999999999999999997445999999999999999999999999996  49999999999


Q ss_pred             HHHHHHhhcCcCCC
Q psy6598          79 LNVHKKTNHRESKN   92 (154)
Q Consensus        79 l~~H~~~~~~~~~~   92 (154)
                      |..|+++|++++.+
T Consensus       110 L~~H~~~H~~~k~~  123 (124)
T 1ubd_C          110 LKSHILTHAKAKNN  123 (124)
T ss_dssp             THHHHHHHC-----
T ss_pred             HHHHHHHHcccccC
Confidence            99999999887653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.87  E-value=4.5e-22  Score=124.32  Aligned_cols=84  Identities=31%  Similarity=0.646  Sum_probs=79.7

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeC--CCCcccccCchh
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC--DRCPRSYRQLCT   78 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~   78 (154)
                      +++|.|.+..|++.|.....|..|++.|.++++|.|..  |++.|.....|..|+++|.++++|.|  +.|++.|.+...
T Consensus        34 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~  111 (119)
T 2jp9_A           34 EKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKT--CQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDE  111 (119)
T ss_dssp             TCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHH
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCc--cCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHH
Confidence            47899985569999999999999999999999999988  99999999999999999999999999  899999999999


Q ss_pred             HHHHHHhh
Q psy6598          79 LNVHKKTN   86 (154)
Q Consensus        79 l~~H~~~~   86 (154)
                      |..|+++|
T Consensus       112 L~~H~~~H  119 (119)
T 2jp9_A          112 LVRHHNMH  119 (119)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHhcC
Confidence            99999875

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.86  E-value=8.4e-22  Score=121.66  Aligned_cols=84  Identities=27%  Similarity=0.578  Sum_probs=80.3

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      +++|.|.   |++.|.....|..|++.|.++++|.|.+  |++.|.....|..|+++|.++++|.|..|++.|.....|.
T Consensus         8 ~k~~~C~---C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            8 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCEECT---TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCEecc---CCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            5889993   9999999999999999999999999998  9999999999999999999999999999999999999999


Q ss_pred             HHHHhhcCc
Q psy6598          81 VHKKTNHRE   89 (154)
Q Consensus        81 ~H~~~~~~~   89 (154)
                      .|++.|+..
T Consensus        83 ~H~~~~~~~   91 (110)
T 2csh_A           83 RHVTSCTKS   91 (110)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHcccc
Confidence            999998764

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.86  E-value=2.5e-22  Score=125.01  Aligned_cols=90  Identities=20%  Similarity=0.252  Sum_probs=81.9

Q ss_pred             CCCeecccccccccccCHHHHHHHHHH--hcCCCcee-ecccccCccc--CChhhHHHHhhhhcCCCceeCCCCcccccC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRI--HSGEKPYV-CQVRDCQKRF--TEYSSLYKHTLVHSDIRPFICDRCPRSYRQ   75 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~   75 (154)
                      +++|.|.  .|++.|.....|..|++.  |.+.+++. |..  |++.|  .....|..|+++|.+++||.|..|++.|.+
T Consensus        17 ~~~~~C~--~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~   92 (115)
T 2dmi_A           17 ASKFRCK--DCSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFES   92 (115)
T ss_dssp             CCSEEBS--SSSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSS
T ss_pred             CCCEECC--ccCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHhhccCCCcceECCCCCCccCC
Confidence            5899999  999999999999999998  77777655 988  99999  899999999999999999999999999999


Q ss_pred             chhHHHHHHhhcCcCCCCC
Q psy6598          76 LCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        76 ~~~l~~H~~~~~~~~~~~~   94 (154)
                      ...|..|+++|+.......
T Consensus        93 ~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           93 LQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             HHHHHHHHHHTTTTTCSCC
T ss_pred             HHHHHHHHHHhCCcccCCC
Confidence            9999999999987755443

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.86  E-value=9.6e-22  Score=132.38  Aligned_cols=106  Identities=30%  Similarity=0.636  Sum_probs=86.1

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|..  |++.|.....|..|++.|.++++|.|..|++.|.....|.
T Consensus        47 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  122 (190)
T 2i13_A           47 EKPYKCP--ECGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR  122 (190)
T ss_dssp             -CCEECT--TTCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHH
T ss_pred             CCCccCC--CcCchhCCHHHHHHHHHhcCCCCCccCcc--cCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHH
Confidence            3678888  88888888888888888888888888877  8888888888888888888888888888888888888888


Q ss_pred             HHHHhhcCcCCCCCCCCCcchhhhHHhhhh
Q psy6598          81 VHKKTNHRESKNKKPSNRNNIVKQECVQKI  110 (154)
Q Consensus        81 ~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (154)
                      .|++.|++++++.+..+...+.....+..+
T Consensus       123 ~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H  152 (190)
T 2i13_A          123 AHQRTHTGEKPYKCPECGKSFSREDNLHTH  152 (190)
T ss_dssp             HHHHHHHCCCCEECTTTCCEESCHHHHHHH
T ss_pred             HHHHHhCCCCCeECCCCCcccCCHHHHHHH
Confidence            888888888888888777777666555544

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.86  E-value=6.1e-22  Score=121.80  Aligned_cols=87  Identities=16%  Similarity=0.334  Sum_probs=79.3

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      +++|.|.  .|++.|.....|..|++.|.  ++|.|.+  |++.|.....|..|++ |.++++|.|..|++.|.....|.
T Consensus        14 ~~~~~C~--~C~~~f~~~~~l~~H~~~H~--~~~~C~~--C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~   86 (107)
T 1wjp_A           14 KEVYQCR--LCNAKLSSLLEQGSHERLCR--NAAVCPY--CSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIW   86 (107)
T ss_dssp             CCCCBCT--TTCCBCSSHHHHHHHHHHHH--HSBCCTT--TCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHH
T ss_pred             CcCeECC--CCCCccCCHHHHHHHHHHCC--CCccCCC--CCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHH
Confidence            5799999  99999999999999999994  7899998  9999999999999996 99999999999999999999999


Q ss_pred             HHHH-hhcCcCCCCC
Q psy6598          81 VHKK-TNHRESKNKK   94 (154)
Q Consensus        81 ~H~~-~~~~~~~~~~   94 (154)
                      .|++ .|.+++.+..
T Consensus        87 ~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           87 RHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHTSCCCCCCCC
T ss_pred             HHHHHHcCCCCCCCC
Confidence            9998 6666655543

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.86  E-value=8.1e-22  Score=108.71  Aligned_cols=58  Identities=31%  Similarity=0.591  Sum_probs=42.0

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIR   62 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   62 (154)
                      ||||.|.  .||++|.....|..|+++|+|++||.|..  ||+.|.....|.+|+++|+|++
T Consensus         2 EKpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCN--FCGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCC--CCCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            6777777  77777777777777777777777777766  7777777777777777776653

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.85  E-value=8.9e-22  Score=128.47  Aligned_cols=109  Identities=21%  Similarity=0.288  Sum_probs=97.1

Q ss_pred             CCCeecccccccccccCHHHHHHHHHH-hcCCCc--------eeecccccCcccCChhhHHHHhhhhcCCCceeCCC--C
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRI-HSGEKP--------YVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR--C   69 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C   69 (154)
                      +++|.|.  .|++.|.....|..|++. |.+..+        |.|..  |++.|.....|..|++.|.++++|.|..  |
T Consensus        23 ~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C   98 (155)
T 2rpc_A           23 QLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKPFPCPFPGC   98 (155)
T ss_dssp             CCSSSCC--CCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHCCCSEECSCTTT
T ss_pred             hcccccc--cCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCCCCcccCCcCCC
Confidence            3679999  999999999999999997 777655        78988  9999999999999999999999999998  9


Q ss_pred             cccccCchhHHHHHHhhcCcCCCCCCC--CCcchhhhHHhhhhcCC
Q psy6598          70 PRSYRQLCTLNVHKKTNHRESKNKKPS--NRNNIVKQECVQKINSN  113 (154)
Q Consensus        70 ~~~f~~~~~l~~H~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~  113 (154)
                      ++.|.....|..|+++|++++.+.+..  +...+.....+..+...
T Consensus        99 ~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~  144 (155)
T 2rpc_A           99 GKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHV  144 (155)
T ss_dssp             CCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTT
T ss_pred             CCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHH
Confidence            999999999999999999999998885  88888887777776543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=4e-21  Score=120.73  Aligned_cols=85  Identities=26%  Similarity=0.477  Sum_probs=79.7

Q ss_pred             CCCeecccccccccccCHHHHHHHHHH---hcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCch
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRI---HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLC   77 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   77 (154)
                      +++|.|.  .|++.|.....|..|++.   |.++++|.|.+  |++.|.....|..|+++|.+++||.|..|++.|.+..
T Consensus        33 ~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  108 (124)
T 2dlq_A           33 EKPFECP--KCGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKK  108 (124)
T ss_dssp             CCSCBCT--TTCCBCSSHHHHHHHHHHCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHH
T ss_pred             CCCeECC--CCCchhcCHHHHHHHHhhhhcCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHH
Confidence            4789999  999999999999999985   57889999998  9999999999999999999999999999999999999


Q ss_pred             hHHHHHHhhcCc
Q psy6598          78 TLNVHKKTNHRE   89 (154)
Q Consensus        78 ~l~~H~~~~~~~   89 (154)
                      .|..|++.+|+.
T Consensus       109 ~l~~H~~~~H~~  120 (124)
T 2dlq_A          109 DLQSHMIKLHSG  120 (124)
T ss_dssp             HHHHHHHHTSSC
T ss_pred             HHHHHHHHHCCC
Confidence            999999976654

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.85  E-value=8.1e-23  Score=121.54  Aligned_cols=85  Identities=24%  Similarity=0.482  Sum_probs=80.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      ||||.|.  .|++.|.....|..|++.|.++++|.|..  |++.|.....|..|++.|.+ .+|.|..|++.|.....|.
T Consensus         1 ek~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~   75 (88)
T 1llm_C            1 MKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLE   75 (88)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEECTT--TCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHcCCCCCccCCC--CCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhH
Confidence            7899999  99999999999999999999999999988  99999999999999999885 7899999999999999999


Q ss_pred             HHHHhhcCcC
Q psy6598          81 VHKKTNHRES   90 (154)
Q Consensus        81 ~H~~~~~~~~   90 (154)
                      .|++.+|+..
T Consensus        76 ~H~~~~h~~~   85 (88)
T 1llm_C           76 NEVARLKKLV   85 (88)
T ss_dssp             HHHHHHHHHT
T ss_pred             HHHHHHHHHh
Confidence            9999987643

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.85  E-value=3.1e-21  Score=113.54  Aligned_cols=82  Identities=26%  Similarity=0.454  Sum_probs=76.1

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC---CcccccCchhH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR---CPRSYRQLCTL   79 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l   79 (154)
                      ||.|.+..||+.|.....|..|++.|.++++|.|.+++|++.|.....|.+|+++|++   |.|..   |++.|.....|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            6999322999999999999999999999999999655699999999999999999998   99999   99999999999


Q ss_pred             HHHHHhhc
Q psy6598          80 NVHKKTNH   87 (154)
Q Consensus        80 ~~H~~~~~   87 (154)
                      ..|+++||
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999875

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=3e-21  Score=125.87  Aligned_cols=110  Identities=22%  Similarity=0.404  Sum_probs=94.4

Q ss_pred             CCCeecccc---cccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC--CcccccC
Q psy6598           1 MKPFFYFPW---DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR--CPRSYRQ   75 (154)
Q Consensus         1 ~k~~~C~~~---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~   75 (154)
                      +++|.|.+.   .|++.|.....|..|++.|.++++|.|.++.|++.|.....|..|+++|.++++|.|+.  |++.|.+
T Consensus        32 ~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  111 (155)
T 2gli_A           32 RKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSN  111 (155)
T ss_dssp             SSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESS
T ss_pred             CcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCC
Confidence            367888722   34599999999999999999999999974459999999999999999999999999998  9999999


Q ss_pred             chhHHHHH-HhhcCcCCCCCCC--CCcchhhhHHhhhh
Q psy6598          76 LCTLNVHK-KTNHRESKNKKPS--NRNNIVKQECVQKI  110 (154)
Q Consensus        76 ~~~l~~H~-~~~~~~~~~~~~~--~~~~~~~~~~~~~~  110 (154)
                      ...|..|+ +.|.+++++.+..  +...+.....+..+
T Consensus       112 ~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H  149 (155)
T 2gli_A          112 ASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKH  149 (155)
T ss_dssp             SSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHH
Confidence            99999998 7888888888876  88877776665544

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.84  E-value=4.3e-21  Score=111.65  Aligned_cols=74  Identities=24%  Similarity=0.355  Sum_probs=68.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHH-HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCccccc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMR-IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYR   74 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   74 (154)
                      +++|.|.++.|++.|.....|..|++ .|.++++|.|.++.|++.|.....|.+|+++|+++++|.|..|++.|.
T Consensus         5 ~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            5 SSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             CSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            57899995569999999999999999 799999999976669999999999999999999999999999999984

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.84  E-value=2.4e-21  Score=106.77  Aligned_cols=58  Identities=29%  Similarity=0.690  Sum_probs=55.4

Q ss_pred             CCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        31 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      ++||.|.+  ||+.|.....|..|+++|++++||.|..||+.|.+.+.|..|+++|.+++
T Consensus         2 EKpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNF--CGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTT--TCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCC--CCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            79999998  99999999999999999999999999999999999999999999998764

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.84  E-value=1.4e-20  Score=126.61  Aligned_cols=110  Identities=24%  Similarity=0.486  Sum_probs=68.8

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHh-hhh-cCCCceeC--CCCcccccCch
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHT-LVH-SDIRPFIC--DRCPRSYRQLC   77 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h-~~~~~~~C--~~C~~~f~~~~   77 (154)
                      ++|.|.+..|++.|.....|..|++.|.++++|.|..+.|++.|.....|..|+ +.| .+.++|.|  ..|++.|....
T Consensus        41 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~  120 (190)
T 1tf6_A           41 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHN  120 (190)
T ss_dssp             CSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHH
T ss_pred             CCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHH
Confidence            566662116666666666666666666666666665112666666666666666 445 35566666  66777777777


Q ss_pred             hHHHHHHhhcCcCCCCCCC--CCcchhhhHHhhhhc
Q psy6598          78 TLNVHKKTNHRESKNKKPS--NRNNIVKQECVQKIN  111 (154)
Q Consensus        78 ~l~~H~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  111 (154)
                      .|..|+++|++++++.+..  +...+.....+..+.
T Consensus       121 ~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~  156 (190)
T 1tf6_A          121 QLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHE  156 (190)
T ss_dssp             HHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHH
T ss_pred             HHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHH
Confidence            7777777766666666655  666666655555544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.83  E-value=1.9e-20  Score=122.10  Aligned_cols=89  Identities=26%  Similarity=0.480  Sum_probs=84.4

Q ss_pred             eecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC--CcccccCchhHHH
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR--CPRSYRQLCTLNV   81 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~   81 (154)
                      |.|.  .|++.|.....|..|++.|.++++|.|.++.|++.|.....|.+|+++|.++++|.|.+  |++.|.+...|..
T Consensus        63 ~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~  140 (155)
T 2rpc_A           63 EECP--REGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKK  140 (155)
T ss_dssp             TTCT--TSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHH
T ss_pred             cCCC--CcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHH
Confidence            7899  99999999999999999999999999975569999999999999999999999999997  9999999999999


Q ss_pred             HHHhhcCcCCCCC
Q psy6598          82 HKKTNHRESKNKK   94 (154)
Q Consensus        82 H~~~~~~~~~~~~   94 (154)
                      |+++|++++++.+
T Consensus       141 H~~~H~~~k~~~c  153 (155)
T 2rpc_A          141 HMHVHTSDKSGPS  153 (155)
T ss_dssp             SSTTTTSCCCSCS
T ss_pred             HHHHhcCCCCCCC
Confidence            9999999887754

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1.1e-20  Score=123.08  Aligned_cols=109  Identities=22%  Similarity=0.368  Sum_probs=94.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHH---HhcCCCceeeccccc---CcccCChhhHHHHhhhhcCCCceeCCC--Cccc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMR---IHSGEKPYVCQVRDC---QKRFTEYSSLYKHTLVHSDIRPFICDR--CPRS   72 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~---~h~~~~~~~C~~~~C---~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~   72 (154)
                      |.+|+|+  .|++.|.+...|..|++   .|.++++|.|.+.+|   ++.|.....|..|++.|.++++|.|.+  |++.
T Consensus         1 E~~~~C~--~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~   78 (155)
T 2gli_A            1 ETDCRWD--GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKS   78 (155)
T ss_dssp             CCBCCBT--TCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCC
T ss_pred             CCcCCcC--CCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCc
Confidence            5678899  99999999999999998   688899999975233   499999999999999999999999985  9999


Q ss_pred             ccCchhHHHHHHhhcCcCCCCCCC--CCcchhhhHHhhhhc
Q psy6598          73 YRQLCTLNVHKKTNHRESKNKKPS--NRNNIVKQECVQKIN  111 (154)
Q Consensus        73 f~~~~~l~~H~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~  111 (154)
                      |.....|..|++.|++++++.+..  +...+.....+..+.
T Consensus        79 f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~  119 (155)
T 2gli_A           79 YSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQ  119 (155)
T ss_dssp             CSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHH
T ss_pred             ccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHH
Confidence            999999999999999999888886  777776655555443

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.81  E-value=5.6e-20  Score=123.71  Aligned_cols=110  Identities=23%  Similarity=0.431  Sum_probs=96.1

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceee--cccccCcccCChhhHHHHhhhhcCCCceeCC--CCcccccCc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVC--QVRDCQKRFTEYSSLYKHTLVHSDIRPFICD--RCPRSYRQL   76 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~   76 (154)
                      +++|.|.+..||+.|.....|..|++.|.++++|.|  ..  |++.|.....|..|+++|.++++|.|.  .|++.|...
T Consensus        10 ~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   87 (190)
T 1tf6_A           10 YKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEG--CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTK   87 (190)
T ss_dssp             CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTT--CCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCH
T ss_pred             CcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCC--CChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCH
Confidence            478999444999999999999999999999999999  77  999999999999999999999999999  899999999


Q ss_pred             hhHHHHHHhhc--CcCCCCC--CCCCcchhhhHHhhhhcC
Q psy6598          77 CTLNVHKKTNH--RESKNKK--PSNRNNIVKQECVQKINS  112 (154)
Q Consensus        77 ~~l~~H~~~~~--~~~~~~~--~~~~~~~~~~~~~~~~~~  112 (154)
                      ..|..|++..|  ++..+.+  ..+...+.....+..+..
T Consensus        88 ~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~  127 (190)
T 1tf6_A           88 ANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQF  127 (190)
T ss_dssp             HHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHG
T ss_pred             HHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHH
Confidence            99999995555  4566777  778888777776666543

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.77  E-value=7.8e-19  Score=111.96  Aligned_cols=73  Identities=22%  Similarity=0.347  Sum_probs=67.2

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCC------CceeCCCCccccc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI------RPFICDRCPRSYR   74 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~------~~~~C~~C~~~f~   74 (154)
                      ++||.|+  .||+.|.....|..|+++|++++||.|..  |++.|.....|..|+++|+++      ++|+|..|++.|.
T Consensus        48 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~  123 (133)
T 2lt7_A           48 EKKYPCR--YCEKVFPLAEYRTKHEIHHTGERRYQCLA--CGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQI  123 (133)
T ss_dssp             CSCEECS--SSSCEESSHHHHHHHHHHHHTCCCEEESS--SCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCC
T ss_pred             CCCeeCC--ccCeecccccchhhhccccCCCccccCCC--CCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhh
Confidence            5899999  99999999999999999999999999998  999999999999999998765      4599999999887


Q ss_pred             Cch
Q psy6598          75 QLC   77 (154)
Q Consensus        75 ~~~   77 (154)
                      ...
T Consensus       124 ~~~  126 (133)
T 2lt7_A          124 RQY  126 (133)
T ss_dssp             CCC
T ss_pred             hcc
Confidence            543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=7.3e-20  Score=110.87  Aligned_cols=78  Identities=19%  Similarity=0.316  Sum_probs=71.8

Q ss_pred             cccCHHHHHHHHHHhcCCCceeecccccCcccC-ChhhHHHHhhhhcC-CCceeCCCCcccccCchhHHHHHHhhcCcCC
Q psy6598          14 SFASATNYKNHMRIHSGEKPYVCQVRDCQKRFT-EYSSLYKHTLVHSD-IRPFICDRCPRSYRQLCTLNVHKKTNHRESK   91 (154)
Q Consensus        14 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   91 (154)
                      .+.....+..|++.|.++++|.|.+  |++.|. ....|.+|+++|++ +++|.|.+|++.|.+...|..|+++|+++++
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~--C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPT--CNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTT--TCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCC--CCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            4556677889999999999999998  999999 99999999999998 9999999999999999999999999998876


Q ss_pred             CC
Q psy6598          92 NK   93 (154)
Q Consensus        92 ~~   93 (154)
                      ..
T Consensus        83 ~~   84 (98)
T 2gqj_A           83 SD   84 (98)
T ss_dssp             SC
T ss_pred             CC
Confidence            54

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.76  E-value=1.1e-18  Score=101.02  Aligned_cols=61  Identities=34%  Similarity=0.630  Sum_probs=33.4

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC   66 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   66 (154)
                      ++|.|.  .|++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|+++|++++||.|
T Consensus        17 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSBCS--SSCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCEECC--CCCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            455555  55555555555555555555555555554  55555555555555555555555544

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=2.3e-18  Score=104.73  Aligned_cols=66  Identities=18%  Similarity=0.254  Sum_probs=54.9

Q ss_pred             CCCeecccccccccccCHHHHHHHHH-Hh---cCCCceeecccccCcccCChhhHHHH-hhhhcCCCceeCCCCc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMR-IH---SGEKPYVCQVRDCQKRFTEYSSLYKH-TLVHSDIRPFICDRCP   70 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~   70 (154)
                      ++||.|.  .||+.|.....|..|++ .|   .+++||.|..  ||+.|.....|..| +++|++++||.|.++.
T Consensus        16 ekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~--Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           16 EGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVE--CNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCCEEETT--TTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            5788888  88888888888888887 48   5678888887  88888888888888 7888888888887643

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=1.5e-18  Score=102.18  Aligned_cols=76  Identities=25%  Similarity=0.473  Sum_probs=63.2

Q ss_pred             HHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCC----CceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          21 YKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI----RPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        21 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      |.+|+++|+++++|.|.+  |++.|.....|.+|++.|.+.    ++|.|..|++.|.....|..|+++|+++....+..
T Consensus         3 ~~~H~~~H~~~k~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~   80 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGEN   80 (86)
T ss_dssp             TTCCSTTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCC
T ss_pred             cccccceecCCCCCcCCC--CCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCC
Confidence            556888888889999988  999999999999998876654    78999999999999999999999988888776655


Q ss_pred             CC
Q psy6598          97 NR   98 (154)
Q Consensus        97 ~~   98 (154)
                      +.
T Consensus        81 ~~   82 (86)
T 1x6h_A           81 SG   82 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            44

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.74  E-value=3.9e-19  Score=112.60  Aligned_cols=81  Identities=15%  Similarity=0.233  Sum_probs=71.6

Q ss_pred             Ceeccccccccccc------CHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCc
Q psy6598           3 PFFYFPWDCKISFA------SATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQL   76 (154)
Q Consensus         3 ~~~C~~~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   76 (154)
                      ++.|+  .|++.|.      ....|..|+ .|++++||.|..  |++.|.....|..|+++|  ++||.|..|++.|.+.
T Consensus        41 ~~~c~--~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~  113 (129)
T 2wbt_A           41 RLIRA--IVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPL--CLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTST  113 (129)
T ss_dssp             HHHHH--HHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTT--TCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSH
T ss_pred             cccch--hhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCC--CCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCH
Confidence            45677  7777665      667777776 688899999998  999999999999999999  8899999999999999


Q ss_pred             hhHHHHHHhhcCcC
Q psy6598          77 CTLNVHKKTNHRES   90 (154)
Q Consensus        77 ~~l~~H~~~~~~~~   90 (154)
                      ..|..|+++|+++.
T Consensus       114 ~~l~~H~~~h~~~~  127 (129)
T 2wbt_A          114 DSALDHVCKKHNIC  127 (129)
T ss_dssp             HHHHHHHHHTTCCC
T ss_pred             HHHHHHHHHHCCcc
Confidence            99999999999863

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=6.5e-18  Score=101.84  Aligned_cols=75  Identities=17%  Similarity=0.256  Sum_probs=68.8

Q ss_pred             cccccCHHHHHHHHHHhcCCCceeecccccCccc-CChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHH-HHhhcCc
Q psy6598          12 KISFASATNYKNHMRIHSGEKPYVCQVRDCQKRF-TEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVH-KKTNHRE   89 (154)
Q Consensus        12 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~   89 (154)
                      ..+|.....|..|++.|.++++|.|..  |++.| .....|..|+++| ++++|.|..|++.|.....|..| +++|.+.
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~   89 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSL   89 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCC
Confidence            456778888999999999999999988  99999 9999999999999 99999999999999999999999 7777543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=7.8e-18  Score=95.60  Aligned_cols=64  Identities=27%  Similarity=0.453  Sum_probs=56.5

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKN   92 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   92 (154)
                      .|.++++|.|.+  |++.|.....|.+|+++|.++++|.|..|++.|.....|..|+++|+++++.
T Consensus         3 s~~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~   66 (70)
T 1x5w_A            3 SGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG   66 (70)
T ss_dssp             SCCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCC
Confidence            367788999988  9999999999999999999999999999999999999999999999887654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.73  E-value=7.5e-18  Score=96.68  Aligned_cols=63  Identities=27%  Similarity=0.634  Sum_probs=48.0

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESK   91 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   91 (154)
                      .+.++++|.|..  |++.|.....|..|+++|.++++|.|..|++.|.+...|..|+++|+++++
T Consensus        11 ~~~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           11 MTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             CCCCCCSBCCTT--SSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCC
T ss_pred             ccCCCCCeECCC--CCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCC
Confidence            456677777776  888887777777887777777778887788888777778888777776654

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=6.6e-18  Score=96.44  Aligned_cols=64  Identities=36%  Similarity=0.666  Sum_probs=59.7

Q ss_pred             HHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          25 MRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        25 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      .++|+++++|.|.+  |++.|.....|.+|+++|.++++|.|..|++.|.....|..|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCC--CCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            35789999999988  99999999999999999999999999999999999999999999998764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=1.7e-18  Score=100.15  Aligned_cols=70  Identities=34%  Similarity=0.620  Sum_probs=63.1

Q ss_pred             HHHHHHHhcCCCceeecccccCcccCChhhHHHHhh-hhcCC-CceeCCCCcccccCchhHHHHHHhhcCcCCC
Q psy6598          21 YKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTL-VHSDI-RPFICDRCPRSYRQLCTLNVHKKTNHRESKN   92 (154)
Q Consensus        21 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   92 (154)
                      |.+|+++|+++++|.|.+  |++.|.....|..|++ .|.+. ++|.|..|++.|.....|..|++.+|+...+
T Consensus         3 ~~~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CCccccccCCCCCeECCC--cCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            456889999999999998  9999999999999997 67764 8999999999999999999999998876543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.72  E-value=1.4e-17  Score=95.53  Aligned_cols=60  Identities=37%  Similarity=0.744  Sum_probs=57.9

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCce
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF   64 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   64 (154)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|+++|++++||
T Consensus        15 ~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           15 DKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCSBCCT--TSSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CCCeECC--CCCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCCC
Confidence            5799999  99999999999999999999999999998  999999999999999999999886

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=3.5e-17  Score=96.30  Aligned_cols=69  Identities=19%  Similarity=0.313  Sum_probs=64.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCC----CceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGE----KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSY   73 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   73 (154)
                      +++|.|.  .|++.|.....|..|++.|.+.    ++|.|..  |++.|.....|..|+++|.+++++.|..|+..|
T Consensus        13 ~k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           13 EKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            5899999  9999999999999999987665    7899998  999999999999999999999999999999875

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.70  E-value=1.5e-17  Score=90.54  Aligned_cols=55  Identities=25%  Similarity=0.464  Sum_probs=32.6

Q ss_pred             CCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhc
Q psy6598          31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        31 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      +++|.|..  |++.|.....|..|+++|.+++||.|..|++.|.....|..|+++||
T Consensus         2 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            2 SSSRECSY--CGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             ---CBCTT--TCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CCCccCCC--CcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            45566655  66666666666666666666666666666666666666666666655

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1.1e-17  Score=93.90  Aligned_cols=61  Identities=25%  Similarity=0.621  Sum_probs=56.5

Q ss_pred             HHhcCCCceeecccccCcccCChhhHHHHhhh-h-cCCCceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLV-H-SDIRPFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        26 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      ++|+++++|.|..  |++.|.....|..|++. | .++++|.|+.|++.|.+...|..|++.+|+
T Consensus         3 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKV--CSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTT--TCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCC--CcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4688999999988  99999999999999998 7 589999999999999999999999999886

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=2.4e-17  Score=95.26  Aligned_cols=65  Identities=26%  Similarity=0.559  Sum_probs=60.9

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNK   93 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~   93 (154)
                      .+.++++|.|.+  |++.|.....|.+|+++|.++++|.|.+|++.|.....|..|+++|++++++.
T Consensus        12 ~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~   76 (77)
T 2cot_A           12 QQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS   76 (77)
T ss_dssp             CCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCC
T ss_pred             cCCCCCCEECCC--CCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCC
Confidence            456789999998  99999999999999999999999999999999999999999999999887664

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.69  E-value=3.9e-17  Score=96.02  Aligned_cols=61  Identities=20%  Similarity=0.415  Sum_probs=54.1

Q ss_pred             HHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        26 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      ..+.+.++|.|.+  |++.|.....|.+|+++|++++||.|..|++.|.+...|..|++..|.
T Consensus        21 ~~~~~~~~h~C~~--Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           21 GLSASAECHLCPV--CGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             SSCCCCTTEECTT--SCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCCEECCC--CCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            4566778899988  999999999999999999999999999999999999999999865443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=6.7e-17  Score=91.67  Aligned_cols=61  Identities=25%  Similarity=0.324  Sum_probs=57.8

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCcee
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFI   65 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   65 (154)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|++.|++++|..
T Consensus         7 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            7 GHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCSEECS--SSSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCeECC--CCCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCCCC
Confidence            5899999  99999999999999999999999999998  9999999999999999999988653

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=7.3e-17  Score=93.38  Aligned_cols=64  Identities=20%  Similarity=0.385  Sum_probs=56.0

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcC---CCceeCCCCcccccCchhHHHHHHhhcCcCCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD---IRPFICDRCPRSYRQLCTLNVHKKTNHRESKN   92 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   92 (154)
                      .|+++++|.|.+  |++.|.....|.+|+++|.+   +++|.|..|++.|.....|..|++.+|.....
T Consensus         1 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~   67 (78)
T 2d9h_A            1 GSSGSSGLQCEI--CGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL   67 (78)
T ss_dssp             CCCSCCCEECSS--SCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSS
T ss_pred             CCCCCcCeECCC--CCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            378899999988  99999999999999999985   88999999999999999999999776655443

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=2.6e-16  Score=91.13  Aligned_cols=72  Identities=21%  Similarity=0.348  Sum_probs=66.5

Q ss_pred             cCCCceeecccccCcccCChhhHHHHhh-hhcCCCceeCCC--CcccccCchhHHHHHHhhcCcCCCCCCCCCcc
Q psy6598          29 SGEKPYVCQVRDCQKRFTEYSSLYKHTL-VHSDIRPFICDR--CPRSYRQLCTLNVHKKTNHRESKNKKPSNRNN  100 (154)
Q Consensus        29 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~  100 (154)
                      +++++|.|.++.|++.|.....|..|++ .|.++++|.|..  |++.|.....|..|+++|++++++.+..+...
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~   77 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS   77 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCC
Confidence            5788999987789999999999999999 799999999999  99999999999999999999999888876654

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.66  E-value=1.2e-16  Score=86.89  Aligned_cols=55  Identities=25%  Similarity=0.541  Sum_probs=31.0

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      ||.|.  .|++.|.....|..|++.|.++++|.|..  |++.|.....|.+|+++|.++
T Consensus         1 p~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICE--ECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCC--CCcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhccc
Confidence            45555  55555555555555555555555555555  555555555555555555444

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=4.2e-17  Score=93.21  Aligned_cols=68  Identities=28%  Similarity=0.664  Sum_probs=57.3

Q ss_pred             HHHHHHH-HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhc
Q psy6598          20 NYKNHMR-IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        20 ~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      .|..|+. .|.++++|.|.+..|++.|.....|.+|+++|.++++|.|..|++.|.+...|..|+++|+
T Consensus         5 ~~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            5 PMNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             ---CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            3445544 5788999999633499999999999999999999999999999999999999999998863

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.65  E-value=2e-16  Score=92.95  Aligned_cols=58  Identities=22%  Similarity=0.396  Sum_probs=53.7

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHh-hhhcCCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHT-LVHSDIR   62 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~   62 (154)
                      +++|.|+  .||+.|.....|..|+++|++++||.|.+  |++.|.....|.+|+ +.|.++.
T Consensus        26 ~~~h~C~--~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           26 AECHLCP--VCGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CTTEECT--TSCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCEECC--CCCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCCC
Confidence            4689999  99999999999999999999999999998  999999999999997 4687664

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.65  E-value=2e-16  Score=86.00  Aligned_cols=56  Identities=30%  Similarity=0.439  Sum_probs=50.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      +++|.|.  .|++.|.....|..|++.|+++++|.|..  |++.|.....|..|++.|++
T Consensus         2 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECS--YCGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCT--TTCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCC--CCcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            5899999  99999999999999999999999999988  99999999999999998863

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=2.5e-16  Score=93.33  Aligned_cols=82  Identities=26%  Similarity=0.535  Sum_probs=72.8

Q ss_pred             CCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCCCCcchhhhHHhhh
Q psy6598          30 GEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQECVQK  109 (154)
Q Consensus        30 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (154)
                      |+++|.|.++.|++.|.....|..|+++|.+.++|.|..|++.|.....|..|++.|+++..+.+..+...+.....+..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            46899997445999999999999999999999999999999999999999999999999999999999888887776666


Q ss_pred             hc
Q psy6598         110 IN  111 (154)
Q Consensus       110 ~~  111 (154)
                      +.
T Consensus        81 H~   82 (90)
T 1a1h_A           81 HT   82 (90)
T ss_dssp             HH
T ss_pred             HH
Confidence            54

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=3.8e-16  Score=89.04  Aligned_cols=58  Identities=34%  Similarity=0.693  Sum_probs=55.2

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIR   62 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   62 (154)
                      +++|.|.  .|++.|.....|..|++.|.++++|.|.+  |++.|.....|.+|+++|+++.
T Consensus        12 ~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A           12 EKPYGCV--ECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCccCC--CCCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            5899999  99999999999999999999999999998  9999999999999999998764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.64  E-value=3.9e-16  Score=84.85  Aligned_cols=56  Identities=32%  Similarity=0.651  Sum_probs=53.6

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      ||.|..  |++.|.....|..|+++|.++++|.|..|++.|.....|..|+++|++++
T Consensus         1 p~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEE--CGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTT--TCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCC--CcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            689988  99999999999999999999999999999999999999999999998875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=6.3e-16  Score=92.71  Aligned_cols=84  Identities=20%  Similarity=0.338  Sum_probs=77.2

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCCCCcchhhhHHh
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQECV  107 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~  107 (154)
                      +.++++|.|..  |++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|++++.+.+..+...+.....+
T Consensus         3 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   80 (96)
T 2dmd_A            3 SGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQL   80 (96)
T ss_dssp             CCCCCCCCBTT--TTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHH
T ss_pred             CCCCcCeECCC--CCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHH
Confidence            46789999998  9999999999999999999999999999999999999999999999999999999999988888777


Q ss_pred             hhhcCC
Q psy6598         108 QKINSN  113 (154)
Q Consensus       108 ~~~~~~  113 (154)
                      ..+...
T Consensus        81 ~~H~~~   86 (96)
T 2dmd_A           81 TVHLRS   86 (96)
T ss_dssp             HHHHTT
T ss_pred             HHHHHH
Confidence            776543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=4.1e-16  Score=95.88  Aligned_cols=82  Identities=23%  Similarity=0.381  Sum_probs=74.7

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCCCCcchhhhHH
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQEC  106 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~  106 (154)
                      .|+++++|.| .  |++.|.....|..|++.|.+.++|.|..|++.|.....|..|++.|++++.+.+..+...+.....
T Consensus         4 ~h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~   80 (110)
T 2csh_A            4 GSSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDS   80 (110)
T ss_dssp             CCCCCCCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHH
T ss_pred             CCCCCCCEec-c--CCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHH
Confidence            5789999999 8  999999999999999999999999999999999999999999999999999999988888776665


Q ss_pred             hhhhc
Q psy6598         107 VQKIN  111 (154)
Q Consensus       107 ~~~~~  111 (154)
                      +..+.
T Consensus        81 l~~H~   85 (110)
T 2csh_A           81 FHRHV   85 (110)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            55543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.1e-15  Score=91.53  Aligned_cols=81  Identities=20%  Similarity=0.412  Sum_probs=74.1

Q ss_pred             cCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCc--CCCCCCCCCcchhhhHH
Q psy6598          29 SGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE--SKNKKPSNRNNIVKQEC  106 (154)
Q Consensus        29 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~--~~~~~~~~~~~~~~~~~  106 (154)
                      .++++|.|..  |++.|.....|..|+++|.++++|.|..|++.|.....|..|++.|+++  +.+.+..+...+.....
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~   80 (95)
T 2yt9_A            3 SGSSGVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDH   80 (95)
T ss_dssp             CCCSCEECSS--SCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHH
T ss_pred             CCCCCeECCC--CCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHH
Confidence            5789999998  9999999999999999999999999999999999999999999999987  78889999888887777


Q ss_pred             hhhhc
Q psy6598         107 VQKIN  111 (154)
Q Consensus       107 ~~~~~  111 (154)
                      +..+.
T Consensus        81 L~~H~   85 (95)
T 2yt9_A           81 LNGHI   85 (95)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            66654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=1.2e-17  Score=103.68  Aligned_cols=92  Identities=12%  Similarity=0.083  Sum_probs=82.3

Q ss_pred             HHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhh--hcCCCcee-CCCCcccc--cCchhHHHHHHhhcCcCCC
Q psy6598          18 ATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLV--HSDIRPFI-CDRCPRSY--RQLCTLNVHKKTNHRESKN   92 (154)
Q Consensus        18 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~~~~~~~~   92 (154)
                      ...|..|++.|+++++|.|..  |++.|.....|..|++.  |.+.+++. |..|++.|  .....|..|+++|++++++
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~   81 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVL   81 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSC
T ss_pred             chhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcce
Confidence            356788999999999999998  99999999999999998  87777655 99999999  8999999999999999999


Q ss_pred             CCCCCCcchhhhHHhhhhc
Q psy6598          93 KKPSNRNNIVKQECVQKIN  111 (154)
Q Consensus        93 ~~~~~~~~~~~~~~~~~~~  111 (154)
                      .+..+...+.....+..+.
T Consensus        82 ~C~~C~k~f~~~~~L~~H~  100 (115)
T 2dmi_A           82 KCMYCGHSFESLQDLSVHM  100 (115)
T ss_dssp             BCSSSCCBCSSHHHHHHHH
T ss_pred             ECCCCCCccCCHHHHHHHH
Confidence            9999999888877777654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=7e-16  Score=92.89  Aligned_cols=61  Identities=15%  Similarity=0.245  Sum_probs=55.6

Q ss_pred             CCCeecccccccccc-cCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHH-hhhhcCCCceeC
Q psy6598           1 MKPFFYFPWDCKISF-ASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKH-TLVHSDIRPFIC   66 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~~~~~C   66 (154)
                      +++|.|.  .|++.| .....|..|++.| ++++|.|.+  |++.|.....|..| +++|+++..|.+
T Consensus        32 ~~~~~C~--~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~--Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           32 KGSVSCP--TCQAVGRKTIEGLKKHMENC-KQEMFTCHH--CGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             TSCEECT--TTCSCEESSHHHHHHHHHHH-CCCCCCCSS--SCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             CCCcCCC--CCCCCcccCHHHHHHHHHHH-CCCCeECCC--CCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            5789999  999999 9999999999999 999999998  99999999999999 889987654443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=3.1e-16  Score=95.29  Aligned_cols=66  Identities=20%  Similarity=0.271  Sum_probs=59.9

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHhh-hh---cCCCceeCCCCcccccCchhHHHH-HHhhcCcCCCCCC
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTL-VH---SDIRPFICDRCPRSYRQLCTLNVH-KKTNHRESKNKKP   95 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~~~~~~~   95 (154)
                      ..|++||.|..  |++.|.....|.+|++ .|   .+++||.|..||+.|.....|..| +++|.+++++.+.
T Consensus        13 ~~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~   83 (102)
T 2ghf_A           13 KKVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLT   83 (102)
T ss_dssp             CCCCSSEECSS--CSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEE
T ss_pred             CCCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCC
Confidence            36889999988  9999999999999998 59   668999999999999999999999 8999998877654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1.3e-15  Score=83.56  Aligned_cols=55  Identities=36%  Similarity=0.720  Sum_probs=33.4

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHh-hhhcC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHT-LVHSD   60 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~   60 (154)
                      |||.|.  .|++.|.....|..|++.|+++++|.|..  |++.|.....|.+|+ +.|.+
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCC--CCccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCC
Confidence            456666  66666666666666666666666666655  666666666666664 34544

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.60  E-value=3.7e-16  Score=94.41  Aligned_cols=63  Identities=21%  Similarity=0.394  Sum_probs=59.0

Q ss_pred             CCCeeccccccccccc-CHHHHHHHHHHhcC-CCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598           1 MKPFFYFPWDCKISFA-SATNYKNHMRIHSG-EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      +++|.|.  .|++.|. ....|..|++.|++ +++|.|.+  |++.|.....|.+|++.|++++|+...
T Consensus        22 ~~~~~C~--~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~kp~~~~   86 (98)
T 2gqj_A           22 RGEAVCP--TCNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAKPSDAE   86 (98)
T ss_dssp             TSCCCCT--TTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSCSSCCC
T ss_pred             CCCcCCC--CCCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCCCCCCC
Confidence            5799999  9999999 99999999999998 99999998  999999999999999999999986544

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.60  E-value=3.4e-15  Score=91.08  Aligned_cols=81  Identities=23%  Similarity=0.507  Sum_probs=74.3

Q ss_pred             cCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCCCCcchhhhHHhh
Q psy6598          29 SGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQECVQ  108 (154)
Q Consensus        29 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (154)
                      .++++|.|.+  |++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|++++.+.+..+...+.....+.
T Consensus        13 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           13 KTKKEFICKF--CGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCBCSS--SCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CCCcCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            4578899998  99999999999999999999999999999999999999999999999999999999998888777666


Q ss_pred             hhc
Q psy6598         109 KIN  111 (154)
Q Consensus       109 ~~~  111 (154)
                      .+.
T Consensus        91 ~H~   93 (106)
T 2ee8_A           91 VHK   93 (106)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.8e-15  Score=83.02  Aligned_cols=55  Identities=25%  Similarity=0.634  Sum_probs=50.8

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHH-hhcC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKK-TNHR   88 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~   88 (154)
                      +||.|..  |++.|.....|..|+++|+++++|.|..|++.|.+...|..|++ .|.+
T Consensus         1 k~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTT--TCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCC--CccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            5799988  99999999999999999999999999999999999999999985 5543

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.59  E-value=2.4e-15  Score=87.46  Aligned_cols=76  Identities=25%  Similarity=0.506  Sum_probs=69.4

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCCCCcchhhhHHhhhh
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQECVQKI  110 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (154)
                      ||.|..  |++.|.....|..|++.|.++++|.|..|++.|.....|..|++.|++++.+.+..+...+.....+..+
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   76 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH   76 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHH
T ss_pred             CccCCC--CcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHH
Confidence            689988  9999999999999999999999999999999999999999999999999999999888887776655543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.57  E-value=2.3e-15  Score=90.07  Aligned_cols=60  Identities=20%  Similarity=0.252  Sum_probs=47.4

Q ss_pred             eecccccccccccCHHHHHHHHHH-hcCCCc--------eeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRI-HSGEKP--------YVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+|.  .|++.|.....|..|++. |.++++        |.|..  |++.|.....|.+|+++|++++||.|.
T Consensus        26 ~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           26 RPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSCC--CCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSS--TTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             Cccc--ccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4566  888888888888888887 777776        77877  888888888888888888888888775

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=3.6e-15  Score=83.37  Aligned_cols=56  Identities=21%  Similarity=0.408  Sum_probs=52.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHH-h-cCCCceeecccccCcccCChhhHHHHhhhhcC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRI-H-SGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      +++|.|.  .||+.|.....|..|++. | .++++|.|..  |++.|.....|..|++.|++
T Consensus         8 ~k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            8 EHTYRCK--VCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TTEEECT--TTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             CcceECC--CCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            5899999  999999999999999998 7 6899999988  99999999999999998865

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.57  E-value=5.1e-15  Score=85.52  Aligned_cols=63  Identities=19%  Similarity=0.285  Sum_probs=56.8

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcC---CCceeecccccCcccCChhhHHHHh-hhhcCCCceeCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSG---EKPYVCQVRDCQKRFTEYSSLYKHT-LVHSDIRPFICD   67 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~   67 (154)
                      +++|.|.  .|++.|.....|..|++.|.+   +++|.|.+  |++.|.....|.+|+ ..|.+.++....
T Consensus         5 ~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            5 SSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CcCeECC--CCCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            6899999  999999999999999999986   89999998  999999999999999 467777766543

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=7e-15  Score=83.81  Aligned_cols=57  Identities=30%  Similarity=0.727  Sum_probs=52.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS   59 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   59 (154)
                      +++|.|.+..|++.|.....|..|++.|.++++|.|..  |++.|.....|.+|+++|+
T Consensus        17 ~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             CCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            57899973359999999999999999999999999998  9999999999999999884

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.55  E-value=4.9e-15  Score=82.96  Aligned_cols=56  Identities=23%  Similarity=0.444  Sum_probs=36.7

Q ss_pred             cCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC-CCcccccCchhHHHHHHhhcC
Q psy6598          29 SGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD-RCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        29 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      .+.++|.|..  |++.|. ...|..|+++ ++++||.|. .|++.|...+.|..|+++|..
T Consensus         6 C~~~~~~C~~--C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            6 SGKRTQPCTY--CTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCCEEECSS--SCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCCeeccc--cCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            3456666666  666666 6666666666 666666666 666666666666666666543

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=2.5e-14  Score=86.18  Aligned_cols=81  Identities=16%  Similarity=0.304  Sum_probs=72.5

Q ss_pred             CCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC--CCcccccCchhHHHHHHhhcCcCCCCCCCCCcchhhhHHh
Q psy6598          30 GEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD--RCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQECV  107 (154)
Q Consensus        30 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~  107 (154)
                      ..++|.|.++.|++.|.....|..|++.|.++++|.|.  .|++.|.....|..|++.|++++.+.+..+...+.....+
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            45789998777999999999999999999999999996  5999999999999999999999999999998887776655


Q ss_pred             hhh
Q psy6598         108 QKI  110 (154)
Q Consensus       108 ~~~  110 (154)
                      ..+
T Consensus        92 ~~H   94 (100)
T 2ebt_A           92 ALH   94 (100)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            543

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.54  E-value=8.2e-15  Score=86.60  Aligned_cols=56  Identities=29%  Similarity=0.683  Sum_probs=53.7

Q ss_pred             CCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        31 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      ++||.|..  |++.|.....|..|+++|.++++|.|..|++.|.....|..|++.|++
T Consensus         1 ek~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~   56 (88)
T 1llm_C            1 MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI   56 (88)
T ss_dssp             CCCEECTT--TCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH
T ss_pred             CCCCcCCC--CCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC
Confidence            47899998  999999999999999999999999999999999999999999999884

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.54  E-value=1.1e-14  Score=82.77  Aligned_cols=58  Identities=29%  Similarity=0.586  Sum_probs=41.2

Q ss_pred             cCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC--CcccccCchhHHHHHHhh
Q psy6598          29 SGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR--CPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        29 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~   86 (154)
                      ...++|.|.+++|++.|.....|.+|+++|+++++|.|.+  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4456677765557777777777777777777777777754  777777777777777654

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.53  E-value=1.6e-14  Score=85.25  Aligned_cols=80  Identities=18%  Similarity=0.337  Sum_probs=72.1

Q ss_pred             CCceeecccccCcccCChhhHHHHhhhhcCCCceeCC--CCcccccCchhHHHHHHhhcCcCCCCCCCCCcchhhhHHhh
Q psy6598          31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD--RCPRSYRQLCTLNVHKKTNHRESKNKKPSNRNNIVKQECVQ  108 (154)
Q Consensus        31 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (154)
                      ..+|.|.+++|++.|.....|..|++.|.++++|.|+  .|++.|.....|..|++.|+++..+.+..+...+.....+.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            4679998778999999999999999999999999997  59999999999999999999999999998888877766655


Q ss_pred             hh
Q psy6598         109 KI  110 (154)
Q Consensus       109 ~~  110 (154)
                      .+
T Consensus        83 ~H   84 (89)
T 2wbs_A           83 LH   84 (89)
T ss_dssp             HH
T ss_pred             HH
Confidence            44

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.53  E-value=1.1e-14  Score=82.75  Aligned_cols=58  Identities=28%  Similarity=0.646  Sum_probs=51.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhh
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH   58 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   58 (154)
                      +++|.|.+..|++.|.....|..|++.|+++++|.|.++.|++.|.....|.+|+++|
T Consensus        15 ~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           15 IRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4789999223999999999999999999999999996445999999999999999876

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=1.3e-14  Score=81.28  Aligned_cols=57  Identities=14%  Similarity=0.138  Sum_probs=53.2

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeec-ccccCcccCChhhHHHHhhhhcCCCc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQ-VRDCQKRFTEYSSLYKHTLVHSDIRP   63 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~~~C~~~f~~~~~l~~H~~~h~~~~~   63 (154)
                      ++||.|.  .|++.|. ...|..|++. ++++||.|. .  |++.|..+..|..|+++|...++
T Consensus         8 ~~~~~C~--~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            8 KRTQPCT--YCTKEFV-FDTIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCEEECS--SSCCEEE-HHHHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCeecc--ccCCccC-HHHHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhcccCc
Confidence            5899999  9999999 9999999999 999999998 8  99999999999999999977654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.51  E-value=1.4e-14  Score=88.57  Aligned_cols=61  Identities=20%  Similarity=0.322  Sum_probs=57.8

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhh-hhcCCCceeCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTL-VHSDIRPFICD   67 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~   67 (154)
                      ++|.|.  .|++.|.....|..|++ |.++++|.|.+  |++.|.....|.+|++ .|.++++|.|.
T Consensus        41 ~~~~C~--~C~~~f~~~~~l~~H~~-H~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           41 NAAVCP--YCSLRFFSPELKQEHES-KCEYKKLTCLE--CMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HSBCCT--TTCCCBSSHHHHHHHHH-HCSTGGGEEGG--GTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CCccCC--CCCCccCCHHHHHHHHH-cCCCCCccCcc--ccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            579999  99999999999999996 99999999998  9999999999999997 89999999875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=5.2e-14  Score=81.01  Aligned_cols=56  Identities=21%  Similarity=0.405  Sum_probs=51.0

Q ss_pred             CCCeecccccccccccCHHHHHHHHH-HhcCC-CceeecccccCcccCChhhHHHHhhhhcC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMR-IHSGE-KPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      +++|.|.  .|++.|.....|..|++ .|.++ ++|.|..  |++.|.....|..|++.|.+
T Consensus        13 ~k~~~C~--~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A           13 EKPYECY--ICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCSEECT--TTCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSC
T ss_pred             CCCeECC--CcCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCC
Confidence            5899999  99999999999999997 67765 8999988  99999999999999997543

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.48  E-value=5.5e-14  Score=82.09  Aligned_cols=71  Identities=21%  Similarity=0.349  Sum_probs=60.7

Q ss_pred             ceee--cccccCcccCChhhHHHHhhhhcCCCceeCCC--CcccccCchhHHHHHHhhcCcCCCCCCC---CCcchhhhH
Q psy6598          33 PYVC--QVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR--CPRSYRQLCTLNVHKKTNHRESKNKKPS---NRNNIVKQE  105 (154)
Q Consensus        33 ~~~C--~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~~~~---~~~~~~~~~  105 (154)
                      ||.|  ..  |++.|.....|..|+++|.++++|.|+.  |++.|.....|..|+++|++   +.+..   +...+....
T Consensus         1 p~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~   75 (85)
T 2j7j_A            1 MYVCHFEN--CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWT   75 (85)
T ss_dssp             CEECCSTT--CCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHH
T ss_pred             CccCCCCC--CCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHH
Confidence            6899  66  9999999999999999999999999988  99999999999999999988   55555   666555544


Q ss_pred             Hhh
Q psy6598         106 CVQ  108 (154)
Q Consensus       106 ~~~  108 (154)
                      .+.
T Consensus        76 ~l~   78 (85)
T 2j7j_A           76 LYL   78 (85)
T ss_dssp             HHH
T ss_pred             HHH
Confidence            443

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=5.3e-17  Score=92.56  Aligned_cols=69  Identities=19%  Similarity=0.397  Sum_probs=59.2

Q ss_pred             HHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          18 ATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        18 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      ...|..|++.|.++++|.|..  |++.|.....|..       +++|.|..|++.|.....|..|+++|++++++.+.
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~   71 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPS   71 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCC
T ss_pred             chhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCC
Confidence            345778888999999999988  9999999888766       78899999999999999999999999888777654

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.46  E-value=1.8e-14  Score=74.85  Aligned_cols=44  Identities=27%  Similarity=0.384  Sum_probs=39.3

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSS--SCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            677888999999988  99999999999999999999999999876

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=1.7e-14  Score=74.17  Aligned_cols=44  Identities=32%  Similarity=0.483  Sum_probs=38.3

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |++.|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSS--SSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            466788889999988  99999999999999999999999998876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2e-14  Score=74.61  Aligned_cols=45  Identities=36%  Similarity=0.531  Sum_probs=39.8

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|.+  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCC--cCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            3677888999999988  99999999999999999999999999877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.45  E-value=1.1e-14  Score=75.65  Aligned_cols=45  Identities=31%  Similarity=0.527  Sum_probs=39.0

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSS--SCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4677888889999988  99999999999999999998999998876

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.45  E-value=1.9e-14  Score=74.64  Aligned_cols=45  Identities=29%  Similarity=0.439  Sum_probs=40.2

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCC--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3677889999999988  99999999999999999999999999877

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2e-14  Score=74.53  Aligned_cols=45  Identities=24%  Similarity=0.428  Sum_probs=39.8

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCC--CChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3677888999999988  99999999999999999999999999877

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2e-14  Score=74.63  Aligned_cols=45  Identities=31%  Similarity=0.489  Sum_probs=39.9

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTT--TCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCC--CCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            3677888999999988  99999999999999999999999999877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.7e-14  Score=74.11  Aligned_cols=45  Identities=36%  Similarity=0.561  Sum_probs=39.6

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSS--SCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCC--CChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4677888999999988  99999999999999999999999999876

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.45  E-value=2e-14  Score=74.66  Aligned_cols=44  Identities=30%  Similarity=0.451  Sum_probs=39.2

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCc--cCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            677888999999988  99999999999999999999999999877

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.5e-14  Score=74.23  Aligned_cols=45  Identities=33%  Similarity=0.535  Sum_probs=39.9

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      .|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSS--SCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4677889999999988  99999999999999999999999999876

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2e-14  Score=74.55  Aligned_cols=45  Identities=33%  Similarity=0.553  Sum_probs=40.2

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETT--TTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCC--cChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3677889999999988  99999999999999999999999999887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.45  E-value=2.2e-14  Score=74.42  Aligned_cols=45  Identities=29%  Similarity=0.442  Sum_probs=39.6

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSS--SCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCC--CcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3677888999999988  99999999999999999999999999876

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2e-14  Score=74.58  Aligned_cols=45  Identities=27%  Similarity=0.436  Sum_probs=39.5

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSS--SCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCC--CCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            3677888899999988  99999999999999999999999999877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2e-14  Score=74.56  Aligned_cols=45  Identities=31%  Similarity=0.484  Sum_probs=39.9

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      .|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSS--SCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCC--CCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            3677888999999988  99999999999999999999999999887

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.1e-14  Score=73.85  Aligned_cols=45  Identities=33%  Similarity=0.524  Sum_probs=40.3

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|.+  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSS--SCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCC--CChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4677889999999988  99999999999999999999999999887

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.1e-14  Score=74.55  Aligned_cols=45  Identities=33%  Similarity=0.583  Sum_probs=39.4

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSS--SCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3677888899999988  99999999999999999999999999877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=1.6e-14  Score=74.90  Aligned_cols=45  Identities=33%  Similarity=0.373  Sum_probs=39.5

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSS--SCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCc--cChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4677888899999988  99999999999999999999999999877

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.2e-14  Score=74.41  Aligned_cols=45  Identities=33%  Similarity=0.544  Sum_probs=39.8

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      .|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTT--TCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3667888999999988  99999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=2.5e-14  Score=74.19  Aligned_cols=45  Identities=33%  Similarity=0.518  Sum_probs=39.8

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSE--CGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSS--SCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCC--CCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            3677888999999988  99999999999999999999999999877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.45  E-value=3.3e-14  Score=73.77  Aligned_cols=45  Identities=38%  Similarity=0.552  Sum_probs=40.7

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETT--TTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4778899999999988  99999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.6e-14  Score=74.21  Aligned_cols=44  Identities=27%  Similarity=0.289  Sum_probs=39.6

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSS--SCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcc--cCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            667889999999988  99999999999999999999999999887

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2e-14  Score=74.53  Aligned_cols=45  Identities=31%  Similarity=0.448  Sum_probs=39.1

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTT--TTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCC--CCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3677888889999988  99999999999999999999999998877

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.44  E-value=2.2e-14  Score=74.43  Aligned_cols=45  Identities=29%  Similarity=0.355  Sum_probs=39.8

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSS--SCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCC--CCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            3677888999999988  99999999999999999999999999877

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=2.6e-14  Score=74.16  Aligned_cols=44  Identities=34%  Similarity=0.563  Sum_probs=39.4

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSS--SCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCC--ccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            667888999999988  99999999999999999999999999877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2e-14  Score=74.57  Aligned_cols=45  Identities=36%  Similarity=0.628  Sum_probs=39.1

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTT--TCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCC--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3677888889999988  99999999999999999999999998876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.44  E-value=2.8e-14  Score=73.99  Aligned_cols=45  Identities=38%  Similarity=0.499  Sum_probs=39.9

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      .|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSS--SCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCc--cccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3677889999999988  99999999999999999999999999877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.3e-14  Score=74.35  Aligned_cols=45  Identities=36%  Similarity=0.492  Sum_probs=39.2

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSS--SCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCc--CCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            3677888899999988  99999999999999999999999999877

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.1e-14  Score=74.51  Aligned_cols=45  Identities=29%  Similarity=0.355  Sum_probs=39.4

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSS--SCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccc--cCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4677888899999988  99999999999999999999999999877

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.1e-14  Score=74.55  Aligned_cols=45  Identities=36%  Similarity=0.512  Sum_probs=39.8

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSS--SCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCc--CCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3677888999999988  99999999999999999999999999877

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.44  E-value=1e-13  Score=74.42  Aligned_cols=47  Identities=34%  Similarity=0.546  Sum_probs=40.1

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhh-hhcCCCceeCCCCcccccC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTL-VHSDIRPFICDRCPRSYRQ   75 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~   75 (154)
                      .|.++++|.|..  |++.|.....|.+|++ +|.+++||.|.+|++.|.+
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCC--CCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            367788899987  9999999999999986 8888899999999988875

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.5e-14  Score=74.25  Aligned_cols=44  Identities=27%  Similarity=0.447  Sum_probs=39.2

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTT--TCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCC--CCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            677888999999988  99999999999999999999999999877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.7e-14  Score=74.15  Aligned_cols=44  Identities=34%  Similarity=0.437  Sum_probs=39.2

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSS--SCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCc--cChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            667888999999988  99999999999999999999999999877

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=3.4e-14  Score=73.69  Aligned_cols=44  Identities=25%  Similarity=0.305  Sum_probs=39.4

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRE--CGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTT--TCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccc--cChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            667888999999988  99999999999999999999999999877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=2.4e-14  Score=74.24  Aligned_cols=45  Identities=29%  Similarity=0.383  Sum_probs=39.4

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTT--TCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3677888899999988  99999999999999999999999999877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=2.6e-14  Score=74.20  Aligned_cols=45  Identities=24%  Similarity=0.297  Sum_probs=39.9

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|.+  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSS--SCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCc--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4677888999999988  99999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=3.5e-14  Score=73.65  Aligned_cols=44  Identities=34%  Similarity=0.474  Sum_probs=39.3

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|.+|
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSS--SCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCC--CCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            567888999999988  99999999999999999999999999877

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3e-14  Score=73.88  Aligned_cols=45  Identities=29%  Similarity=0.301  Sum_probs=39.2

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      .|+++|+++++|.|..  |++.|.....|..|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSS--SCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCC--CCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3677888889999988  99999999999999999999999999877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.43  E-value=2.9e-14  Score=73.94  Aligned_cols=45  Identities=29%  Similarity=0.263  Sum_probs=39.7

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTT--TCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCC--cCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3677888999999988  99999999999999999999999999877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.6e-14  Score=74.13  Aligned_cols=45  Identities=31%  Similarity=0.566  Sum_probs=39.2

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      .|+++|+++++|.|.+  |++.|.....|.+|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSS--SCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCc--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3677888889999988  99999999999999999999999999877

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.4e-14  Score=74.30  Aligned_cols=45  Identities=27%  Similarity=0.445  Sum_probs=40.4

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTT--TCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4677889999999988  99999999999999999999999999887

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.7e-14  Score=74.10  Aligned_cols=44  Identities=32%  Similarity=0.453  Sum_probs=39.6

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|.+|
T Consensus         3 H~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETT--TTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCC--CCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            677888999999988  99999999999999999999999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=3.3e-14  Score=73.77  Aligned_cols=45  Identities=33%  Similarity=0.463  Sum_probs=39.7

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|..|+++|++++||.|..|
T Consensus         2 ~h~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETT--TTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCC--CCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            3677888999999988  99999999999999999999999999877

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.5e-14  Score=74.20  Aligned_cols=45  Identities=33%  Similarity=0.574  Sum_probs=38.3

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSS--SCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3677888888899987  99999999999999888888888888765

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.8e-14  Score=74.03  Aligned_cols=45  Identities=31%  Similarity=0.526  Sum_probs=39.7

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTT--TCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3677888999999988  99999999999999999999999999877

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.43  E-value=1.6e-13  Score=86.51  Aligned_cols=55  Identities=33%  Similarity=0.594  Sum_probs=52.3

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      ++||.|.  .||+.|.....|..|++.|  +++|.|..  |++.|.....|.+|++.|++.
T Consensus        72 ~~~~~C~--~C~k~f~~~~~l~~H~~~H--~~~~~C~~--C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           72 ISQFVCP--LCLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             HCSEECT--TTCCEESSHHHHHHHHHHT--CCCCBCTT--TCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCCeECC--CCCcccCCHhHHHHHHHHC--CCCCCCCC--CCcccCCHHHHHHHHHHHCCc
Confidence            4799999  9999999999999999999  88999998  999999999999999999875

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.42  E-value=4.8e-14  Score=73.16  Aligned_cols=44  Identities=25%  Similarity=0.405  Sum_probs=39.0

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSS--SSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            567888999999988  99999999999999999999999999877

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.9e-14  Score=74.05  Aligned_cols=44  Identities=34%  Similarity=0.489  Sum_probs=38.5

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTT--TTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCC--CCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            567788889999988  99999999999999999999999998877

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.42  E-value=1.8e-13  Score=81.70  Aligned_cols=61  Identities=18%  Similarity=0.278  Sum_probs=55.7

Q ss_pred             ceeecccccCcccCChhhHHHHhhh-hcCCCc--------eeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLV-HSDIRP--------FICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      .|.|..  |++.|.....|.+|++. |.+.++        |.|..|++.|.....|..|+++|++++++.+.
T Consensus        25 ~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccc--cccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            367877  99999999999999998 998888        99999999999999999999999999887653

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=4.5e-14  Score=73.27  Aligned_cols=44  Identities=30%  Similarity=0.331  Sum_probs=38.8

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|..|
T Consensus         3 h~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSS--SCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcc--cCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            567788899999988  99999999999999999999999999877

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=8.2e-14  Score=72.25  Aligned_cols=44  Identities=30%  Similarity=0.451  Sum_probs=37.5

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSS--SCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCc--CCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            667788888899987  99999988888889888888888888764

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=6.4e-14  Score=72.90  Aligned_cols=44  Identities=30%  Similarity=0.443  Sum_probs=39.3

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhh-hhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTL-VHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C   69 (154)
                      |+++|+++++|.|..  |++.|.....|.+|++ +|++++||.|..|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSS--SCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCc--cCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            677888999999988  9999999999999998 8999999999877

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.39  E-value=7.8e-15  Score=81.21  Aligned_cols=55  Identities=18%  Similarity=0.345  Sum_probs=48.4

Q ss_pred             HHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHH
Q psy6598          21 YKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLN   80 (154)
Q Consensus        21 l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   80 (154)
                      |..|++.|++++||.|..  |++.|.....|.   ++|.+++||.|..||+.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~--C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPV--CSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSS--SCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCC--CCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            446788999999999988  999999988886   7899999999999999998876643

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.39  E-value=2.6e-15  Score=85.40  Aligned_cols=58  Identities=17%  Similarity=0.175  Sum_probs=54.2

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +++|.|.  .||+.|.....|..       +++|.|..  |++.|.....|..|+++|+++++|.|+.|
T Consensus        16 ~~~~~C~--~C~k~f~~~~~l~~-------~~~~~C~~--C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           16 DRSQKCS--KCGIIFIRRSTLSR-------RKTPMCEK--CRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSEEECS--SSCCEEECCCCCCC-------SSSCCCHH--HHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             CCCeeCC--cccchhCCHHHhCc-------CCCCCCCC--CChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            5789999  99999999888876       78999998  99999999999999999999999999987

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.36  E-value=2.5e-13  Score=72.87  Aligned_cols=48  Identities=23%  Similarity=0.203  Sum_probs=26.0

Q ss_pred             cccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          43 KRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        43 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      +.|.....|..|+++|+++++|.|..|++.|...+.|..|+++|++++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            344555555555555555555555555555555555555555555443

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=6e-13  Score=69.59  Aligned_cols=43  Identities=26%  Similarity=0.498  Sum_probs=35.7

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcc
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPR   71 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   71 (154)
                      .|.++++|.|.+  |++.|.....|.+|+++|++++||.|.+|++
T Consensus         6 ~~~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEI--CGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETT--TTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCC--CCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            356778888887  8888888888888888888888888888875

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.36  E-value=2.1e-13  Score=69.19  Aligned_cols=42  Identities=29%  Similarity=0.421  Sum_probs=32.0

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSE--CGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSS--SCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCC--cChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            456677777888877  888888888888888788877777773

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=2.1e-13  Score=70.67  Aligned_cols=42  Identities=31%  Similarity=0.456  Sum_probs=33.4

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSS--SCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCC--CCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            566777888888877  888888888888888888888888776

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.35  E-value=2.2e-13  Score=70.56  Aligned_cols=43  Identities=30%  Similarity=0.479  Sum_probs=33.4

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSS--SSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566777788888877  8888888888888888888888887753

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.35  E-value=5.9e-13  Score=68.61  Aligned_cols=42  Identities=31%  Similarity=0.415  Sum_probs=35.6

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCc
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCP   70 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   70 (154)
                      .|+++++|.|..  |++.|.....|.+|+++|+++++|.|+.||
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETT--TTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCC--CCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            577888888877  888888888888888888888888888886

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.34  E-value=1.4e-13  Score=73.86  Aligned_cols=52  Identities=13%  Similarity=0.231  Sum_probs=48.5

Q ss_pred             cccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCcee
Q psy6598          12 KISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFI   65 (154)
Q Consensus        12 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   65 (154)
                      ++.|.....|..|++.|+++++|.|..  |++.|.....|..|+++|++++||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPI--CYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTT--TCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCC--CCcccCCHHHHHHHHHHhccCCCCC
Confidence            567888899999999999999999998  9999999999999999999999873

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.34  E-value=8e-13  Score=70.87  Aligned_cols=43  Identities=26%  Similarity=0.577  Sum_probs=40.7

Q ss_pred             CCCeecccccccccccCHHHHHHHHH-HhcCCCceeecccccCcccCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMR-IHSGEKPYVCQVRDCQKRFTE   47 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~   47 (154)
                      +++|.|.  .|++.|.....|..|++ +|.++++|.|.+  |++.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~--C~k~F~~   53 (54)
T 2eps_A           10 GKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKCQV--WVSGPSS   53 (54)
T ss_dssp             SCCEECS--SSCCEESSHHHHHHHHHHTSCCCCCCCSSS--SCCSSCC
T ss_pred             CCCeECC--CCCcccCCHHHHHHHHHHhcCCCCCccCCC--CCCCCCC
Confidence            5899999  99999999999999997 899999999998  9999975

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.4e-13  Score=70.45  Aligned_cols=43  Identities=28%  Similarity=0.454  Sum_probs=34.3

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSS--SCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCc--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566778888888877  8888888888888888888888888763

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.8e-13  Score=70.14  Aligned_cols=44  Identities=34%  Similarity=0.570  Sum_probs=34.3

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      +|++.|+++++|.|.+  |++.|.....|.+|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSS--SCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3566777888888877  8888888888888888888888888763

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.8e-13  Score=70.14  Aligned_cols=43  Identities=37%  Similarity=0.501  Sum_probs=33.6

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTT--SCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccc--cCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            566777888888877  8888888888888888888888887753

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.9e-13  Score=70.10  Aligned_cols=42  Identities=29%  Similarity=0.445  Sum_probs=33.1

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSS--SCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCC--CCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            566777788888877  888888888888888888888888775

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.8e-13  Score=70.17  Aligned_cols=43  Identities=37%  Similarity=0.529  Sum_probs=37.3

Q ss_pred             HHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          25 MRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        25 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      ++.|+++++|.|..  |++.|.....|.+|+++|++++||.|.+|
T Consensus         4 ~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDV--CHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSS--SCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcc--cCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            35688889999988  99999999999999999999999998877

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.1e-13  Score=68.56  Aligned_cols=42  Identities=29%  Similarity=0.488  Sum_probs=31.9

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|.
T Consensus         1 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTT--TCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCC--CCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455677777888877  888888888888888788777777763

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.8e-13  Score=70.11  Aligned_cols=43  Identities=33%  Similarity=0.522  Sum_probs=34.0

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |++.|+++++|.|..  |++.|.....|.+|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTT--TCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCC--CCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            566777888888877  8888888888888888888888888763

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.7e-13  Score=70.20  Aligned_cols=43  Identities=35%  Similarity=0.547  Sum_probs=34.0

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSS--SCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCC--CCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            566778888888877  8888888888888888888888888763

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.3e-13  Score=69.87  Aligned_cols=43  Identities=33%  Similarity=0.583  Sum_probs=34.6

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSS--SCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCC--CChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            567788888888877  8888888888888888888888888763

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.1e-13  Score=69.92  Aligned_cols=43  Identities=33%  Similarity=0.498  Sum_probs=33.2

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |++.|+++++|.|..  |++.|.....|.+|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSS--SCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566777778888877  8888888888888888888888887753

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.9e-13  Score=70.09  Aligned_cols=43  Identities=33%  Similarity=0.529  Sum_probs=34.3

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCS--SCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566778888888877  8888888888888888888888888753

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.8e-13  Score=70.13  Aligned_cols=43  Identities=30%  Similarity=0.529  Sum_probs=34.1

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |++.|+++++|.|..  |++.|.....|.+|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTT--TCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566778888888877  8888888888888888888888888763

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.3e-13  Score=70.54  Aligned_cols=42  Identities=33%  Similarity=0.456  Sum_probs=32.2

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|.+  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETT--TTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777777777877  888887777777787777777777775

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.8e-13  Score=69.67  Aligned_cols=43  Identities=40%  Similarity=0.593  Sum_probs=34.0

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      +|+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSS--SCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCC--CCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3566778888888877  888888888888888888888888775

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.8e-13  Score=69.61  Aligned_cols=42  Identities=31%  Similarity=0.539  Sum_probs=33.4

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSS--SCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566777888888877  888888888888888888888888775

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.5e-13  Score=69.73  Aligned_cols=43  Identities=33%  Similarity=0.475  Sum_probs=33.1

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCCSS--SCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCCCC--CCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566777778888877  8888888888888888888778887753

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.7e-13  Score=69.69  Aligned_cols=43  Identities=35%  Similarity=0.488  Sum_probs=34.0

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSS--SCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCC--CCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566778888888877  8888888888888888888888888753

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.3e-13  Score=69.91  Aligned_cols=43  Identities=44%  Similarity=0.593  Sum_probs=34.4

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSS--SCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCC--CCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            556778888888877  8888888888888888888888888763

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4.6e-13  Score=68.60  Aligned_cols=42  Identities=33%  Similarity=0.480  Sum_probs=30.7

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |++.|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTT--TCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCC--CCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            556677777777776  777777777777777777777777763

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=4e-13  Score=69.59  Aligned_cols=43  Identities=30%  Similarity=0.454  Sum_probs=33.2

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTT--TCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCc--cCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566777778888877  8888888888888888888888887753

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.4e-13  Score=69.14  Aligned_cols=42  Identities=29%  Similarity=0.409  Sum_probs=32.5

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETT--TTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCC--CCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566777778888877  888888888888888788877777774

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.7e-13  Score=70.27  Aligned_cols=42  Identities=36%  Similarity=0.441  Sum_probs=32.3

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSS--SCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcc--cCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            566777777788877  888888888888887777777777775

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-13  Score=70.01  Aligned_cols=42  Identities=36%  Similarity=0.553  Sum_probs=33.0

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSS--SCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCC--CCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            566777788888877  888888888888888888888888775

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.4e-13  Score=69.82  Aligned_cols=42  Identities=33%  Similarity=0.564  Sum_probs=32.9

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTT--TTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCc--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777778888877  888888888888888888888888775

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=4.5e-13  Score=69.40  Aligned_cols=42  Identities=33%  Similarity=0.523  Sum_probs=31.4

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSS--SCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677777777776  777777777777777777777777775

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.5e-13  Score=69.81  Aligned_cols=43  Identities=30%  Similarity=0.460  Sum_probs=36.5

Q ss_pred             HHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          25 MRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        25 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      +++|.++++|.|.+  |++.|.....|..|+++|++++||.|.+|
T Consensus         4 ~~~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSS--SCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCC--CCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            35678888888887  99899888888888888888888888876

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=5.8e-13  Score=68.26  Aligned_cols=42  Identities=24%  Similarity=0.422  Sum_probs=30.5

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSS--SSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCC--CCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            556677777777766  777777777777777777777777763

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.1e-13  Score=68.79  Aligned_cols=42  Identities=33%  Similarity=0.436  Sum_probs=31.8

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTT--TCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCC--CCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            566777777777777  777777777777777777777777763

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.30  E-value=1.1e-13  Score=79.47  Aligned_cols=68  Identities=22%  Similarity=0.342  Sum_probs=60.1

Q ss_pred             HHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCC
Q psy6598          19 TNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESK   91 (154)
Q Consensus        19 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   91 (154)
                      ..|..|++.|.+.+++.|.+  |++.|. ...|..|+ .|.+++|+.|+.|++.|.+ ..|..|+++|.++..
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~--C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~~-~~l~~H~~~c~~~~~   70 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQH--CDLELS-ILKLKEHE-DYCGARTELCGNCGRNVLV-KDLKTHPEVCGREGS   70 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSS--SCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEET-TGGGTHHHHBTTBSS
T ss_pred             hHHHhhCcccCCCcccCCcc--cChHhh-HHHHHHHH-hHcCCCceEcccCCCcCcH-HHHHHHHHHccCCcC
Confidence            34677888899999999988  999995 89999999 8999999999999999884 899999999877643

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4.2e-13  Score=68.04  Aligned_cols=41  Identities=37%  Similarity=0.580  Sum_probs=31.6

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC   66 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   66 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTT--TTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCC--ccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            556777777888877  88888888888888777877777776

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.9e-13  Score=69.19  Aligned_cols=46  Identities=28%  Similarity=0.473  Sum_probs=38.9

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRC   69 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   69 (154)
                      |.++|+++++|.|.++.|++.|.....|.+|+++|++++||.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3467888999999722399999999999999999999999999877

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.6e-13  Score=67.91  Aligned_cols=41  Identities=34%  Similarity=0.652  Sum_probs=29.3

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC   66 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   66 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCET--CGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTT--TCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCC--cChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            455677777777766  77777777777777777777777765

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.29  E-value=6.6e-13  Score=68.06  Aligned_cols=42  Identities=21%  Similarity=0.262  Sum_probs=31.4

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |++.|+++++|.|..  |++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSK--CQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTT--TCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCC--CCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            566777777777776  777777777777777777777777763

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.29  E-value=7.5e-13  Score=67.08  Aligned_cols=41  Identities=34%  Similarity=0.494  Sum_probs=29.2

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC   66 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   66 (154)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSS--SCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCC--CCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            445667777777766  77777777777777777777777765

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=7e-13  Score=68.63  Aligned_cols=42  Identities=40%  Similarity=0.631  Sum_probs=32.7

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTT--TCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCC--cCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            456677778888877  888888888888888888888888775

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=6.6e-13  Score=68.67  Aligned_cols=42  Identities=36%  Similarity=0.558  Sum_probs=33.5

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETT--TTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCC--CChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777888888877  888888888888888888888888775

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=6.5e-13  Score=68.76  Aligned_cols=42  Identities=21%  Similarity=0.352  Sum_probs=33.0

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcC-CCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD-IRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNK--CEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSS--SCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcC--CCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566777788888877  88888888888888888887 7888775

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=5.3e-13  Score=69.12  Aligned_cols=42  Identities=31%  Similarity=0.413  Sum_probs=32.3

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|.++++|.|..  |++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSS--SCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCC--CCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777777788877  888888888888887777777777775

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=2.2e-12  Score=67.39  Aligned_cols=39  Identities=28%  Similarity=0.325  Sum_probs=37.2

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQK   43 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~   43 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|.+  |++
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~--C~k   48 (48)
T 2epr_A           10 RKQVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSSGP--SSG   48 (48)
T ss_dssp             CCSEEET--TTTEEESSHHHHHHHGGGSCSCCCCCSCC--CCC
T ss_pred             CcCeeCC--CCCcccCCHHHHHHHHHhcCCCCCccCCC--CCC
Confidence            5899999  99999999999999999999999999998  985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=6.2e-13  Score=67.47  Aligned_cols=41  Identities=32%  Similarity=0.624  Sum_probs=28.2

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC   66 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   66 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEI--CGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSS--SCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCC--CCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            445666677777766  77777777777777777777776665

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.2e-13  Score=67.90  Aligned_cols=42  Identities=24%  Similarity=0.344  Sum_probs=33.6

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|..  |++.|.....|.+|+++|++++||.|.
T Consensus         3 H~~~H~~~~~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETT--TTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcc--cCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566778888888877  888888888888888888888888763

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=6.3e-13  Score=68.79  Aligned_cols=42  Identities=31%  Similarity=0.482  Sum_probs=29.1

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |+++|+++++|.|.+  |++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSS--SCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcc--cChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666777777766  777777777777777777777777664

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.2e-12  Score=66.03  Aligned_cols=44  Identities=18%  Similarity=0.422  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS   45 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58889999999999999999999999999999999988877653

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.26  E-value=2.6e-12  Score=66.39  Aligned_cols=44  Identities=16%  Similarity=0.346  Sum_probs=40.3

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58889999999999999999999999999999999998877653

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.26  E-value=3.8e-12  Score=64.44  Aligned_cols=41  Identities=22%  Similarity=0.395  Sum_probs=37.7

Q ss_pred             HhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCC
Q psy6598          54 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        54 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   94 (154)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++++.+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            67789999999999999999999999999999999877654

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3e-12  Score=66.15  Aligned_cols=44  Identities=16%  Similarity=0.403  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|++++||.|..|++.|.....|..|+++|++++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCC
Confidence            58889999999999999999999999999999999988877643

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=1.3e-12  Score=66.98  Aligned_cols=42  Identities=21%  Similarity=0.236  Sum_probs=30.2

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      |++.|.++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         3 h~~~h~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQE--CGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTT--TCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCC--CCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            455677777777766  777777777777777777777777763

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.9e-12  Score=66.20  Aligned_cols=44  Identities=23%  Similarity=0.428  Sum_probs=40.2

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58889999999999999999999999999999999998877653

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.2e-12  Score=65.62  Aligned_cols=44  Identities=20%  Similarity=0.389  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      .|+++|++++||.|..|++.|.+...|..|+++|++++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999988877653

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.2e-12  Score=66.05  Aligned_cols=43  Identities=16%  Similarity=0.383  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTT
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCC
Confidence            5888999999999999999999999999999999998887765

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2e-12  Score=66.27  Aligned_cols=41  Identities=34%  Similarity=0.438  Sum_probs=26.4

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC   66 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   66 (154)
                      |+++|+++++|.|..  |++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSS--SCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCC--CCcccCchHHHHHHHhHhcCCCCCCC
Confidence            455566666666665  66666666666666666666666654

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.25  E-value=3.2e-12  Score=66.03  Aligned_cols=44  Identities=16%  Similarity=0.428  Sum_probs=40.2

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|++++||.|..|++.|.+...|..|+++|++++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTT
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999998877653

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.7e-12  Score=65.79  Aligned_cols=44  Identities=20%  Similarity=0.372  Sum_probs=40.3

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCC
Confidence            57889999999999999999999999999999999998877654

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.1e-12  Score=65.62  Aligned_cols=44  Identities=20%  Similarity=0.429  Sum_probs=40.3

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999998877653

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.24  E-value=3.4e-12  Score=65.96  Aligned_cols=44  Identities=16%  Similarity=0.311  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|++++||.|..|++.|.....|..|+++|.+++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCC
Confidence            58889999999999999999999999999999999998877653

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.6e-12  Score=65.88  Aligned_cols=43  Identities=16%  Similarity=0.386  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|++++||.|..|++.|.+...|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5888999999999999999999999999999999999887764

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.24  E-value=5.9e-12  Score=65.05  Aligned_cols=44  Identities=25%  Similarity=0.454  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47889999999999999999999999999999999998877653

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.7e-12  Score=65.38  Aligned_cols=44  Identities=16%  Similarity=0.335  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999988877653

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.7e-12  Score=65.77  Aligned_cols=44  Identities=20%  Similarity=0.352  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57889999999999999999999999999999999988877653

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=3.6e-12  Score=65.83  Aligned_cols=44  Identities=16%  Similarity=0.381  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|++++||.|..|++.|.+...|..|+++|.+++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47889999999999999999999999999999999998877653

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4e-12  Score=65.69  Aligned_cols=43  Identities=16%  Similarity=0.364  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++++.++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999998887765

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.8e-12  Score=65.00  Aligned_cols=44  Identities=20%  Similarity=0.422  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|++++||.|+.|++.|.....|..|+++|++++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            58889999999999999999999999999999999988877653

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.23  E-value=4.9e-12  Score=65.34  Aligned_cols=43  Identities=19%  Similarity=0.397  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|++++||.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999998887764

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.1e-12  Score=65.27  Aligned_cols=43  Identities=21%  Similarity=0.430  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788999999999999999999999999999999999887764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=7e-12  Score=64.77  Aligned_cols=43  Identities=16%  Similarity=0.424  Sum_probs=39.8

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      .|+++|++++||.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4788999999999999999999999999999999999887765

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.2e-12  Score=65.21  Aligned_cols=43  Identities=19%  Similarity=0.485  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            4788999999999999999999999999999999999887764

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.23  E-value=5.1e-12  Score=65.22  Aligned_cols=44  Identities=20%  Similarity=0.402  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|++++||.|..|++.|.+...|..|+++|.+++++.+..
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCC
Confidence            47889999999999999999999999999999999988877653

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=4.4e-12  Score=65.47  Aligned_cols=44  Identities=18%  Similarity=0.382  Sum_probs=40.0

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|++++||.|..|++.|.+...|..|+++|++++++.+..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            57889999999999999999999999999999999988877643

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.4e-12  Score=64.46  Aligned_cols=42  Identities=21%  Similarity=0.483  Sum_probs=38.5

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   94 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999998877654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.3e-12  Score=65.59  Aligned_cols=43  Identities=14%  Similarity=0.447  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|++++||.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            5888999999999999999999999999999999998877654

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=5.4e-12  Score=64.54  Aligned_cols=42  Identities=26%  Similarity=0.445  Sum_probs=38.4

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   94 (154)
                      +|+++|++++||.|..|++.|.....|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            578899999999999999999999999999999998877654

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.9e-12  Score=65.03  Aligned_cols=44  Identities=23%  Similarity=0.455  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            58889999999999999999999999999999999988777653

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.6e-12  Score=66.11  Aligned_cols=40  Identities=25%  Similarity=0.502  Sum_probs=32.1

Q ss_pred             HHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        26 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      +.|+++++|.|..  |++.|.....|.+|+++|+++++|.|+
T Consensus         5 ~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            5 SSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCSCCSEEETT--TTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCcCccCCC--CCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4677788888877  888888888888888888888888875

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8.1e-12  Score=64.49  Aligned_cols=43  Identities=19%  Similarity=0.395  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4788999999999999999999999999999999998877664

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=7.2e-12  Score=63.33  Aligned_cols=41  Identities=20%  Similarity=0.357  Sum_probs=37.4

Q ss_pred             HhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCC
Q psy6598          54 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        54 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   94 (154)
                      |+++|++++||.|..|++.|.+...|..|+++|.+++++.+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            67789999999999999999999999999999998877654

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.22  E-value=1.1e-11  Score=63.73  Aligned_cols=38  Identities=21%  Similarity=0.309  Sum_probs=36.3

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQ   42 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~   42 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|..  ||
T Consensus         8 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--cg   45 (45)
T 2epq_A            8 EKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKSGPS--SG   45 (45)
T ss_dssp             CCSSEET--TTTEECSCHHHHHHHHHHHSCCCCCCCCC--CC
T ss_pred             CCCCcCC--CCCcccCCHHHHHHHHHHccCCCCCCCcC--CC
Confidence            6899999  99999999999999999999999999988  86

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.21  E-value=6e-12  Score=64.11  Aligned_cols=39  Identities=31%  Similarity=0.466  Sum_probs=30.3

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      .|+++++|.|..  |++.|.....|.+|+++|++++||.|.
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNE--CDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSS--SCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCC--CCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            567777788877  888888888888888888877777775

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.5e-12  Score=64.82  Aligned_cols=43  Identities=21%  Similarity=0.459  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999998887764

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.1e-12  Score=65.28  Aligned_cols=43  Identities=16%  Similarity=0.417  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5788999999999999999999999999999999998887764

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.4e-12  Score=65.16  Aligned_cols=43  Identities=16%  Similarity=0.358  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            4788999999999999999999999999999999999887764

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.1e-12  Score=65.62  Aligned_cols=44  Identities=25%  Similarity=0.467  Sum_probs=40.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKPS   96 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~   96 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++++.+..
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57889999999999999999999999999999999998877653

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.8e-12  Score=64.81  Aligned_cols=43  Identities=23%  Similarity=0.478  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      .|+++|++++||.|..|++.|.+...|..|+++|++++++.++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3788999999999999999999999999999999998887764

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.8e-12  Score=65.01  Aligned_cols=43  Identities=19%  Similarity=0.437  Sum_probs=39.7

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5888999999999999999999999999999999999887764

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.8e-12  Score=65.06  Aligned_cols=43  Identities=21%  Similarity=0.448  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|++++||.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            5788999999999999999999999999999999998877664

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7e-12  Score=64.70  Aligned_cols=43  Identities=23%  Similarity=0.495  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            4788999999999999999999999999999999998887764

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=4.5e-12  Score=65.54  Aligned_cols=40  Identities=25%  Similarity=0.384  Sum_probs=30.2

Q ss_pred             HHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCC
Q psy6598          26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD   67 (154)
Q Consensus        26 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   67 (154)
                      +.|+++++|.|..  |++.|.....|..|+++|++++||.|.
T Consensus         5 ~~h~~~k~~~C~~--C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSS--SCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCC--CCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4567777777776  777777777777777777777777775

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.4e-12  Score=64.85  Aligned_cols=43  Identities=16%  Similarity=0.414  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.....|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788999999999999999999999999999999998887764

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.6e-12  Score=65.44  Aligned_cols=43  Identities=19%  Similarity=0.437  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|++++||.|..|++.|.....|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5888999999999999999999999999999999998887764

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.7e-12  Score=64.01  Aligned_cols=41  Identities=22%  Similarity=0.374  Sum_probs=37.9

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNK   93 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~   93 (154)
                      +|+++|++++||.|..|++.|.+...|..|+++|++++++.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   42 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPS   42 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCC
Confidence            47889999999999999999999999999999999887664

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.8e-12  Score=64.52  Aligned_cols=43  Identities=14%  Similarity=0.382  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      .|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            4788999999999999999999999999999999998887764

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=1.3e-11  Score=63.04  Aligned_cols=36  Identities=31%  Similarity=0.362  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|++.|+++++|.|..
T Consensus         8 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   43 (44)
T 2emx_A            8 EKPFGCS--CCEKAFSSKSYLLVHQQTHAEEKPSGPSS   43 (44)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHHHHTSSCSCSCCC
T ss_pred             CcCccCC--CCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.9e-12  Score=65.02  Aligned_cols=43  Identities=16%  Similarity=0.427  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999998887764

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=6.4e-12  Score=64.23  Aligned_cols=42  Identities=19%  Similarity=0.327  Sum_probs=38.4

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   94 (154)
                      .|+++|++++||.|..|++.|.+...|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            478899999999999999999999999999999998877654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.1e-11  Score=63.95  Aligned_cols=43  Identities=23%  Similarity=0.424  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      .|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSS
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999998887764

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.4e-12  Score=64.47  Aligned_cols=42  Identities=21%  Similarity=0.559  Sum_probs=38.5

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   94 (154)
                      +|+++|+++++|.|..|++.|.....|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            478899999999999999999999999999999998877654

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=9.3e-12  Score=62.64  Aligned_cols=38  Identities=34%  Similarity=0.527  Sum_probs=28.9

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFIC   66 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   66 (154)
                      +|+++++|.|..  |++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQE--CGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSS--SCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCC--CCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            567777777776  77777777777777777777777766

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=8.7e-12  Score=64.40  Aligned_cols=43  Identities=19%  Similarity=0.428  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788999999999999999999999999999999999887764

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4e-12  Score=64.30  Aligned_cols=41  Identities=20%  Similarity=0.439  Sum_probs=37.5

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNK   93 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~   93 (154)
                      +|+++|++++||.|..|++.|.....|..|+++|.+++++.
T Consensus         1 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS   41 (42)
T ss_dssp             CCCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCC
T ss_pred             CCccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999999999999998887654

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.19  E-value=1.5e-11  Score=63.49  Aligned_cols=36  Identities=33%  Similarity=0.572  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emk_A           10 EKPYECK--ECGKAFSQTTHLIQHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SCSCBCS--SSCCBCSCHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCceECC--CCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999986

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=63.49  Aligned_cols=36  Identities=28%  Similarity=0.485  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|+++|+++++|.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emy_A           10 ENPYECH--ECGKAFSRKYQLISHQRTHAGEKPSGPSS   45 (46)
T ss_dssp             SCCEECS--SSCCEESSHHHHHHHHHHHTTSCCSCSSC
T ss_pred             CcCcCCC--CCCcccCcHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=7.8e-12  Score=64.59  Aligned_cols=43  Identities=16%  Similarity=0.332  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|.++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4788999999999999999999999999999999998887764

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=63.50  Aligned_cols=36  Identities=31%  Similarity=0.574  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|++.|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emp_A           10 VKPYMCN--ECGKAFSVYSSLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESCHHHHHHHHHHHHCCSCCSCCC
T ss_pred             CcCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.6e-11  Score=63.32  Aligned_cols=36  Identities=31%  Similarity=0.516  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytd_A           10 EKPYKCS--ECGKAFHRHTHLNEHRRIHTGYRPSGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHHTCCCSSCSSC
T ss_pred             CcCeECC--CCCCeeCChHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.3e-11  Score=63.75  Aligned_cols=36  Identities=25%  Similarity=0.590  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|++.|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A           10 EKPYKCM--ECGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             CCSSSBT--TTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCCcCCC--CCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=63.39  Aligned_cols=36  Identities=36%  Similarity=0.456  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A           10 EKLYNCK--ECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCBT--TTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCCeECC--CCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=9.3e-12  Score=63.64  Aligned_cols=42  Identities=17%  Similarity=0.284  Sum_probs=38.5

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   94 (154)
                      +|+++|+++++|.|..|++.|.....|..|+++|.+++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            578899999999999999999999999999999998877654

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.4e-12  Score=64.87  Aligned_cols=43  Identities=16%  Similarity=0.373  Sum_probs=39.4

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            4788999999999999999999999999999999998877654

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=9.7e-12  Score=64.18  Aligned_cols=43  Identities=21%  Similarity=0.441  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      .|+++|+++++|.|..|++.|.+...|..|+++|++++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999998887764

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.5e-11  Score=63.44  Aligned_cols=36  Identities=33%  Similarity=0.540  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|++.|++++||.|.+
T Consensus        10 ~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A           10 EKPYKCN--ECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSEET--TTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCeECC--CcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.2e-11  Score=63.89  Aligned_cols=36  Identities=31%  Similarity=0.504  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|+++|++++||.|.+
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytn_A           10 KKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCBCT--TTCCBCSSHHHHHHHGGGTSCCCCCSCCC
T ss_pred             CcCeECC--CCCCeeCCHHHHHHHhhhcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.5e-11  Score=63.38  Aligned_cols=36  Identities=33%  Similarity=0.515  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emm_A           10 ERPHKCN--ECGKSFIQSAHLIQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHHSCCCTTSSSC
T ss_pred             CCCeeCC--CCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.6e-11  Score=63.38  Aligned_cols=36  Identities=25%  Similarity=0.428  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|++.|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em8_A           10 EKPYKCV--ECGKGYKRRLDLDFHQRVHTGEKLSGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHHHCCCCCCSCC
T ss_pred             CCCeECc--ccCchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.4e-11  Score=63.64  Aligned_cols=36  Identities=39%  Similarity=0.529  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|++.|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytq_A           10 EKPYGCS--ECGKAFSSKSYLIIHMRTHSGEKPSGPSS   45 (46)
T ss_dssp             CCSCBCS--SSCCBCSCHHHHHHHHTTTCCSCSSCCCC
T ss_pred             CCCcCCC--ccChhhCChHHHHHHHHHhCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.7e-11  Score=63.22  Aligned_cols=36  Identities=36%  Similarity=0.501  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|++.|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2enc_A           10 EKPFKCE--ECGKGFYTNSQCYSHQRSHSGEKPSGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHSCCSSCCSSCC
T ss_pred             CCCcCCC--CCCCcCCChHHHHHHHHHhCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.18  E-value=1.7e-11  Score=63.22  Aligned_cols=36  Identities=28%  Similarity=0.455  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2el6_A           10 VNPYKCS--QCEKSFSGKLRLLVHQRMHTREKPSGPSS   45 (46)
T ss_dssp             CCSEECS--SSSCEESSHHHHHHHHGGGCCSSCCSCCC
T ss_pred             CCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.3e-12  Score=64.63  Aligned_cols=43  Identities=12%  Similarity=0.380  Sum_probs=39.6

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|+++++|.|..|++.|.....|..|+++|.+++++.+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999998887764

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.5e-12  Score=63.10  Aligned_cols=40  Identities=15%  Similarity=0.373  Sum_probs=37.0

Q ss_pred             HhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCC
Q psy6598          54 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNK   93 (154)
Q Consensus        54 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~   93 (154)
                      |+++|++++||.|..|++.|.+...|..|+++|.+++++.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS   41 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCC
Confidence            6788999999999999999999999999999999887654

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.3e-11  Score=63.64  Aligned_cols=36  Identities=33%  Similarity=0.524  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|+++|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ene_A           10 EKPYKCN--ECGKVFRHNSYLSRHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSEECS--SSCCEESSHHHHHHHHTTTCCCCCCSCCC
T ss_pred             CCCeECC--CCCchhCChHHHHHHHhhcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.4e-11  Score=63.58  Aligned_cols=36  Identities=31%  Similarity=0.507  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|++.|++++||.|.+
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq0_A           10 EKPYKCH--ECGKVFRRNSHLARHQLIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHTTTCCCCCSCCSC
T ss_pred             CCCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.1e-11  Score=62.89  Aligned_cols=36  Identities=28%  Similarity=0.417  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|+++|+++++|.|.+
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A           10 EKPYKCS--DCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCSCBCS--SSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCccCC--ccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=63.24  Aligned_cols=36  Identities=31%  Similarity=0.406  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|+++|++++||.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoq_A           10 EKPFKCD--ICGKSFCGRSRLNRHSMVHTAEKPSGPSS   45 (46)
T ss_dssp             SCSCCCS--SSCCCCSSHHHHHHHHHHTTCCCSSSCCC
T ss_pred             CCCcCCC--cCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.7e-11  Score=68.09  Aligned_cols=41  Identities=29%  Similarity=0.408  Sum_probs=29.7

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHh-hhhcCCCceeCCC
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHT-LVHSDIRPFICDR   68 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~   68 (154)
                      ++|++||.|.+++|+++|.....|.+|+ ++|++++||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4677777776555777777777777776 5777777777753

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.4e-11  Score=63.58  Aligned_cols=36  Identities=31%  Similarity=0.429  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|+++|++++||.|.+
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2elz_A           10 EKPYKCE--DCGKGYNRRLNLDMHQRVHMGEKTSGPSS   45 (46)
T ss_dssp             CSSCBCS--SSCCBCSSHHHHHHHGGGGGSCCCCCSCC
T ss_pred             CCCeeCc--ccCchhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.3e-11  Score=63.65  Aligned_cols=36  Identities=28%  Similarity=0.456  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em7_A           10 EKPYKCE--ECGKGFICRRDLYTHHMVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESCHHHHHHHGGGGTTCCCSSTTC
T ss_pred             CcCccCC--CccchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.18  E-value=1.3e-11  Score=62.34  Aligned_cols=40  Identities=20%  Similarity=0.508  Sum_probs=36.8

Q ss_pred             HhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCC
Q psy6598          54 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNK   93 (154)
Q Consensus        54 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~   93 (154)
                      |+++|++++||.|..|++.|.+...|..|+++|.+++++.
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~   41 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS   41 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCC
Confidence            6788999999999999999999999999999999887654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=63.22  Aligned_cols=36  Identities=31%  Similarity=0.487  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|.+
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en6_A           10 EKPYGCN--ECGKTFSQKSILSAHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             SCCEEET--TTTEEESSHHHHHHHHHHHSSCCCSSSCC
T ss_pred             CcCeECC--CCCcccCchHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.7e-11  Score=63.25  Aligned_cols=36  Identities=19%  Similarity=0.315  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|+++|+++++|.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoo_A           10 ERPYGCN--ECGKNFGRHSHLIEHLKRHFREKSSGPSS   45 (46)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHHHHHHSTTSSCCSC
T ss_pred             CCCEEcc--ccCcccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.4e-11  Score=63.55  Aligned_cols=42  Identities=17%  Similarity=0.449  Sum_probs=38.7

Q ss_pred             HhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          54 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        54 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      |+++|+++++|.|..|++.|.+...|..|+++|++++++.+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            678899999999999999999999999999999998887764

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1e-11  Score=64.13  Aligned_cols=42  Identities=17%  Similarity=0.366  Sum_probs=38.9

Q ss_pred             HhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          54 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        54 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      |+++|++++||.|..|++.|.+...|..|+++|++++++.+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            678899999999999999999999999999999998887764

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=2.1e-11  Score=62.88  Aligned_cols=36  Identities=19%  Similarity=0.169  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|+++|+++++|.|..
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yso_A           10 EKSHQCR--ECGEIFFQYVSLIEHQVLHMGQKNSGPSS   45 (46)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHSCCSCCCTTC
T ss_pred             CCCEEcc--ccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5899999  99999999999999999999999999986

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=63.38  Aligned_cols=36  Identities=39%  Similarity=0.624  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|++.|+++++|.|..
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A           10 EKPFDCI--DCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSBCCT--TTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCeECC--CCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.6e-11  Score=63.35  Aligned_cols=36  Identities=28%  Similarity=0.479  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ysp_A           10 EKPYKCE--KCGKGYNSKFNLDMHQKVHTGERPSGPSS   45 (46)
T ss_dssp             CCSEEET--TTTEEESCHHHHHHHHTTSCSCCSSCCSC
T ss_pred             CCCeECC--CCCCccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=8e-12  Score=64.54  Aligned_cols=43  Identities=23%  Similarity=0.437  Sum_probs=39.5

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKKP   95 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~   95 (154)
                      +|+++|.++++|.|..|++.|.+...|..|+++|.+++++.+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4788999999999999999999999999999999998877664

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=9.8e-12  Score=62.89  Aligned_cols=40  Identities=20%  Similarity=0.446  Sum_probs=36.8

Q ss_pred             HhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCC
Q psy6598          54 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNK   93 (154)
Q Consensus        54 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~   93 (154)
                      |+++|++++||.|..|++.|.+.+.|..|+++|.+++++.
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~   41 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS   41 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTT
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCC
Confidence            7788999999999999999999999999999998887654

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=1.7e-11  Score=63.23  Aligned_cols=36  Identities=31%  Similarity=0.493  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|+++|+++++|.|.+
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em5_A           10 TKSHQCH--ECGRGFTLKSHLNQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SCSEECS--SSCCEESSHHHHHHHHTTTSCSCCSSCCC
T ss_pred             CCCeECC--cCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5799999  99999999999999999999999999987

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.9e-11  Score=63.08  Aligned_cols=36  Identities=36%  Similarity=0.494  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|++.|+++++|.|.+
T Consensus        10 ~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep0_A           10 EKPYKCD--VCHKSFRYGSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHTTTSSSCCCSCCC
T ss_pred             CCCeeCc--ccCcccCChHHHHHHHHHhCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.8e-11  Score=63.10  Aligned_cols=36  Identities=33%  Similarity=0.587  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|+++|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A           10 EKPYKCN--ECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCTTCCT--TTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CcCcCCC--CCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.6e-11  Score=63.32  Aligned_cols=42  Identities=14%  Similarity=0.320  Sum_probs=38.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcC-cCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHR-ESKNKK   94 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-~~~~~~   94 (154)
                      .|+++|.+++||.|..|++.|.....|..|+++|.+ ++++.+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            478899999999999999999999999999999988 777654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.15  E-value=2.7e-11  Score=67.22  Aligned_cols=38  Identities=18%  Similarity=0.312  Sum_probs=24.3

Q ss_pred             hcCCCceeCCC--CcccccCchhHHHHH-HhhcCcCCCCCC
Q psy6598          58 HSDIRPFICDR--CPRSYRQLCTLNVHK-KTNHRESKNKKP   95 (154)
Q Consensus        58 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~~~   95 (154)
                      ++++|||+|..  |+++|.+.+.|..|+ ++|.+++++.+.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            45667777754  777777777777775 456666666544

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=1e-11  Score=63.48  Aligned_cols=42  Identities=19%  Similarity=0.476  Sum_probs=38.3

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   94 (154)
                      +|+++|++++||.|..|++.|.+...|..|+++|++++++.+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            478899999999999999999999999999999998877654

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.5e-11  Score=63.45  Aligned_cols=36  Identities=28%  Similarity=0.407  Sum_probs=34.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|++.|+++++|.|.+
T Consensus        10 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A           10 EKPYQCS--ECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             CCTTCCS--SSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCeeCC--CCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999  99999999999999999999999999987

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.13  E-value=2.3e-11  Score=59.70  Aligned_cols=35  Identities=31%  Similarity=0.586  Sum_probs=26.9

Q ss_pred             HhhhhcCCCceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          54 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        54 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      |+++|++++||.|+.|++.|.....|..|+++|.+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            56677777788888888888888888888777765

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.7e-11  Score=61.85  Aligned_cols=42  Identities=17%  Similarity=0.218  Sum_probs=38.1

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCC
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   94 (154)
                      .|+++|.++++|.|..|++.|.....|..|+++|.+++++.+
T Consensus         2 ~h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            2 SSGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CCSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            367889999999999999999999999999999998877654

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=5.1e-11  Score=60.56  Aligned_cols=35  Identities=20%  Similarity=0.345  Sum_probs=33.4

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeec
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQ   37 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   37 (154)
                      +++|.|.  .|++.|.....|..|++.|+++++|.|.
T Consensus         8 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            8 NGAFFCN--ECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             SCCBCCS--SSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CCCEECC--CCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            5899999  9999999999999999999999999986

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=4.1e-11  Score=61.97  Aligned_cols=36  Identities=33%  Similarity=0.550  Sum_probs=34.4

Q ss_pred             CCCeecccccccccccCHHHHHHHHH-HhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMR-IHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   38 (154)
                      +++|.|.  .||+.|.....|..|++ .|++++||.|..
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A           10 KKPYECI--ECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCSBCCS--SSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             CCCEECC--ccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            5899999  99999999999999999 999999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=5.1e-11  Score=61.44  Aligned_cols=36  Identities=36%  Similarity=0.487  Sum_probs=34.0

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.  .|++.|.....|..|++.|+++++|.|++
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A           10 ERGHRCS--DCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCS--SSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCcCCC--CCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            5899999  99999999999999999999999999963

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.1e-11  Score=61.89  Aligned_cols=38  Identities=32%  Similarity=0.364  Sum_probs=35.0

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQV   38 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   38 (154)
                      +++|.|.++.|++.|.....|..|+++|+++++|.|..
T Consensus        10 ~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   47 (48)
T 2ent_A           10 EKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSS   47 (48)
T ss_dssp             CCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCC
T ss_pred             CCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            58999975579999999999999999999999999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.9e-11  Score=61.18  Aligned_cols=35  Identities=40%  Similarity=0.564  Sum_probs=33.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeec
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQ   37 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   37 (154)
                      +++|.|.  .|++.|.....|..|+++|+++++|.|.
T Consensus        10 ~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A           10 QKPFECT--HCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCSEEET--TTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CcCccCC--CCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            5899999  9999999999999999999999999985

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=5.8e-11  Score=59.62  Aligned_cols=34  Identities=26%  Similarity=0.422  Sum_probs=32.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceee
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVC   36 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   36 (154)
                      +++|.|.  .|++.|.....|..|+++|++++||.|
T Consensus         8 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            8 QRVYECQ--ECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             CCCEECS--SSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CCCeECC--CCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            5899999  999999999999999999999999987

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=7.4e-11  Score=57.79  Aligned_cols=33  Identities=33%  Similarity=0.533  Sum_probs=20.9

Q ss_pred             hhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +|++++||.|..|++.|.+...|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            455666666666666666666666666666554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.03  E-value=1.7e-10  Score=57.20  Aligned_cols=35  Identities=26%  Similarity=0.482  Sum_probs=18.6

Q ss_pred             cCCCceeecccccCcccCChhhHHHHhhhhcCCCcee
Q psy6598          29 SGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFI   65 (154)
Q Consensus        29 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   65 (154)
                      +++++|.|..  |++.|.....|..|+++|++++||.
T Consensus         2 ~~~k~~~C~~--C~k~f~~~~~L~~H~~~H~~~k~~~   36 (39)
T 1njq_A            2 WPPRSYTCSF--CKREFRSAQALGGHMNVHRRDRARL   36 (39)
T ss_dssp             CCSSSEECTT--TCCEESSHHHHHHHHHTTCCSCTTT
T ss_pred             CCCCceECCC--CCcccCCHHHHHHHHHHcCCCccce
Confidence            4445555554  5555555555555555555555544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.02  E-value=1.4e-11  Score=72.70  Aligned_cols=60  Identities=15%  Similarity=0.178  Sum_probs=50.8

Q ss_pred             HHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          25 MRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        25 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      .++|+++++|.|..  |++.|.....|..|+++|++++||.|..|    .....|..|.++|.+..
T Consensus        17 ~~~H~~~kpy~C~~--C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~----~~~~~~~~~~~~~~~~~   76 (88)
T 1x6f_A           17 NGPRLQNSTYQCKH--CDSKLQSTAELTSHLNIHNEEFQKRAKRQ----ERRKQLLSKQKYADGAF   76 (88)
T ss_dssp             CCSCCCCSCEECSS--SCCEESSHHHHHHHHHHHHHHHHHHCCCC----SCCCCCCCCCCCCCCSS
T ss_pred             ccccCCCCCCcCCC--CCCEeCCHHHHHHHHHHhCCCCCcccchh----hhHHHHHhhhccccccc
Confidence            45689999999988  99999999999999999999999999765    45666777788776654

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.02  E-value=2.1e-10  Score=55.30  Aligned_cols=32  Identities=19%  Similarity=0.420  Sum_probs=20.3

Q ss_pred             hcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          58 HSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        58 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      |+++++|.|..|++.|.+...|..|++.|+++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            45566666666666666666666666666554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=99.00  E-value=2.9e-10  Score=54.86  Aligned_cols=32  Identities=25%  Similarity=0.510  Sum_probs=19.2

Q ss_pred             hcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          58 HSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        58 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      |++++||.|..|++.|.....|..|++.|+++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            45556666666666666666666666665544

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.00  E-value=9.4e-12  Score=73.44  Aligned_cols=38  Identities=13%  Similarity=0.333  Sum_probs=21.3

Q ss_pred             hhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCCCC
Q psy6598          57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKNKK   94 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   94 (154)
                      +|++++||.|..|++.|.....|..|+++|.+++++.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C   56 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRA   56 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCccc
Confidence            45555555555555555555555555555555544443

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.99  E-value=3.2e-10  Score=54.18  Aligned_cols=32  Identities=16%  Similarity=0.232  Sum_probs=24.7

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCcee
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYV   35 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   35 (154)
                      |||.|.  .||+.|.....|..|+++|+++++|.
T Consensus         1 kp~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACP--ECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCS--SSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCC--CCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            577787  78888888888888877787777764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=4e-10  Score=55.72  Aligned_cols=32  Identities=22%  Similarity=0.198  Sum_probs=22.9

Q ss_pred             hcCCCceeCCC--CcccccCchhHHHHHHhhcCc
Q psy6598          58 HSDIRPFICDR--CPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        58 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +++++||+|..  |++.|.+.+.|..|+++|.++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            56677777765  777777777777777777654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.97  E-value=1.4e-09  Score=60.09  Aligned_cols=55  Identities=20%  Similarity=0.280  Sum_probs=48.3

Q ss_pred             eecccccccccccCHHHHHHHHH-HhcCCC------ceeecccccCcccCChhhHHHHhhhh
Q psy6598           4 FFYFPWDCKISFASATNYKNHMR-IHSGEK------PYVCQVRDCQKRFTEYSSLYKHTLVH   58 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~------~~~C~~~~C~~~f~~~~~l~~H~~~h   58 (154)
                      |.|.|..|++.|.+...|..|+. .|.+.+      +|.|.+.+|++.+.....|..|++..
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            67889999999999999999984 787765      79999889999999999999998853

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.96  E-value=3.4e-10  Score=56.10  Aligned_cols=34  Identities=24%  Similarity=0.396  Sum_probs=32.2

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceee
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVC   36 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C   36 (154)
                      +++|.|.  .||+.|.....|..|++.|+++++|.+
T Consensus         4 ~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            4 PRSYTCS--FCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SSSEECT--TTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCceECC--CCCcccCCHHHHHHHHHHcCCCcccee
Confidence            5899999  999999999999999999999999875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.2e-10  Score=56.01  Aligned_cols=36  Identities=25%  Similarity=0.430  Sum_probs=29.6

Q ss_pred             HHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCc
Q psy6598          26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRP   63 (154)
Q Consensus        26 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   63 (154)
                      +.|+++++|.|..  |++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPV--CEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETT--TTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCC--CCCccCCHHHHHHHHHHHcCCCC
Confidence            4578888888887  88888888888888888887764

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=2.9e-10  Score=65.00  Aligned_cols=55  Identities=16%  Similarity=0.303  Sum_probs=49.4

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIR   62 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   62 (154)
                      ++++.|.  .|++.|. ...|..|+ .|.+++++.|..  |++.|. ...|..|+++|.+.+
T Consensus        15 ~r~~~C~--~C~~~~~-~~~L~~H~-~~c~~~~~~C~~--C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A           15 LRLAVCQ--HCDLELS-ILKLKEHE-DYCGARTELCGN--CGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCEECS--SSCCEEC-HHHHHHHH-HHHHHCEEECSS--SCCEEE-TTGGGTHHHHBTTBS
T ss_pred             CcccCCc--ccChHhh-HHHHHHHH-hHcCCCceEccc--CCCcCc-HHHHHHHHHHccCCc
Confidence            5899999  9999994 99999999 899999999988  999987 589999999987653

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.95  E-value=1.2e-10  Score=64.13  Aligned_cols=45  Identities=16%  Similarity=0.279  Sum_probs=40.0

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHH
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLY   52 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   52 (154)
                      ++||.|+  .||+.|.....|.   +.|+++++|.|..  |++.|.....+.
T Consensus        12 ~k~~~C~--~C~k~F~~~~~l~---~~H~~~k~~~C~~--C~k~f~~~~~~~   56 (62)
T 1vd4_A           12 RASFKCP--VCSSTFTDLEANQ---LFDPMTGTFRCTF--CHTEVEEDESAM   56 (62)
T ss_dssp             SSEEECS--SSCCEEEHHHHHH---HEETTTTEEBCSS--SCCBCEECTTCS
T ss_pred             CCCccCC--CCCchhccHHHhH---hhcCCCCCEECCC--CCCccccCcccc
Confidence            5799999  9999999988886   8899999999988  999998877654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=6.8e-10  Score=53.84  Aligned_cols=33  Identities=27%  Similarity=0.491  Sum_probs=22.8

Q ss_pred             hhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +|.+++||.|..|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            456667777777777777777777777776554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=5.5e-10  Score=54.58  Aligned_cols=33  Identities=18%  Similarity=0.198  Sum_probs=22.8

Q ss_pred             hhcCCCceeCCCCcccccCc-hhHHHHHHhhcCc
Q psy6598          57 VHSDIRPFICDRCPRSYRQL-CTLNVHKKTNHRE   89 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~~~~~   89 (154)
                      +|.+++||.|..|++.|.+. ..|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            46666777777777777776 7777777776554

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=4.1e-10  Score=55.18  Aligned_cols=33  Identities=18%  Similarity=0.220  Sum_probs=22.3

Q ss_pred             hhhcCCCceeCCCCcccccCchhHHHH-HHhhcC
Q psy6598          56 LVHSDIRPFICDRCPRSYRQLCTLNVH-KKTNHR   88 (154)
Q Consensus        56 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~   88 (154)
                      ++|++++||.|..|++.|.....|..| ++.|.+
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            356667777777777777777777777 666544

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=6.8e-10  Score=53.92  Aligned_cols=33  Identities=27%  Similarity=0.477  Sum_probs=22.7

Q ss_pred             hhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      .|.+++||.|..|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            456667777777777777777777777766543

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.92  E-value=3.5e-10  Score=55.28  Aligned_cols=36  Identities=28%  Similarity=0.507  Sum_probs=32.2

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      |++.|+++++|.|..  |++.|.....|.+|+++|.++
T Consensus         2 H~~~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCC--CCcccCcHHHHHHHHHHhccC
Confidence            667899999999988  999999999999999998764

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=1.2e-09  Score=54.04  Aligned_cols=34  Identities=21%  Similarity=0.297  Sum_probs=19.1

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      +++++||.|.++.|++.|..+..|.+|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            3455666664333666666666666666666543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.91  E-value=6.7e-10  Score=53.94  Aligned_cols=33  Identities=15%  Similarity=0.237  Sum_probs=21.4

Q ss_pred             hhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      .|.+++||.|..|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            355666667766777776666666676666543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.91  E-value=1.1e-09  Score=52.75  Aligned_cols=34  Identities=29%  Similarity=0.497  Sum_probs=25.1

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHhhhhcCCCc
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRP   63 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   63 (154)
                      |+++++|.|..  |++.|.....|.+|+++|++++|
T Consensus         2 h~~~k~~~C~~--C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCAL--CLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSS--SCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCC--CcchhCCHHHHHHHHHHHcCCCC
Confidence            56777777776  77777777777777777776653

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.90  E-value=1.1e-09  Score=52.73  Aligned_cols=34  Identities=35%  Similarity=0.767  Sum_probs=26.3

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHhhhhcCCCc
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRP   63 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   63 (154)
                      |+++++|.|..  |++.|.....|.+|+++|++++|
T Consensus         2 H~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCC--CCcccCCHHHHHHHHHHcCCCCC
Confidence            66778888877  88888888888888888877654

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.89  E-value=8e-10  Score=57.47  Aligned_cols=36  Identities=22%  Similarity=0.482  Sum_probs=26.2

Q ss_pred             hhcCCCceeCCCCcccccCchhHHHHHH-hhcCcCCC
Q psy6598          57 VHSDIRPFICDRCPRSYRQLCTLNVHKK-TNHRESKN   92 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~   92 (154)
                      +|++++||.|..|++.|.....|..|++ +|.++...
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~~~   37 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEEEG   37 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC----
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCCCC
Confidence            4778888888888888888888888888 77666544

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=1.2e-09  Score=52.92  Aligned_cols=33  Identities=24%  Similarity=0.481  Sum_probs=22.4

Q ss_pred             hhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      .|.++++|.|..|++.|.....|..|+++|.++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            355666777777777777777777777776554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=1.3e-09  Score=53.57  Aligned_cols=35  Identities=31%  Similarity=0.578  Sum_probs=15.6

Q ss_pred             cCCCceeecccccCcccCChhhHHHHhhhhcCCCc
Q psy6598          29 SGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRP   63 (154)
Q Consensus        29 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   63 (154)
                      +++++|.|.++.|++.|.....|.+|+++|+++++
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~   36 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLK   36 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCC
Confidence            34444444411244444444444444444444443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.87  E-value=2e-09  Score=52.21  Aligned_cols=32  Identities=22%  Similarity=0.489  Sum_probs=21.5

Q ss_pred             hcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          58 HSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        58 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      |.+++||.|..|++.|.....|..|+++|.++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            55666677777777777777777777766554

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.85  E-value=6.3e-10  Score=57.57  Aligned_cols=38  Identities=13%  Similarity=0.370  Sum_probs=28.3

Q ss_pred             HHHhhhhcCCCceeCC--CCcccccCchhHHHHHHhhcCc
Q psy6598          52 YKHTLVHSDIRPFICD--RCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        52 ~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      ..|...|++++||.|.  .|++.|.+.+.|..|+++|.++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3445567788888885  5888888888888888887665

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.83  E-value=2.4e-09  Score=51.03  Aligned_cols=31  Identities=29%  Similarity=0.504  Sum_probs=18.0

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcCCCcee
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFI   65 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~   65 (154)
                      ||.|..  |++.|.....|..|+++|+++++|.
T Consensus         2 p~~C~~--C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            2 KFACPE--CPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCSS--SCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             cccCCC--CCchhCCHHHHHHHHHHhCCCCCCC
Confidence            455655  6666666666666666665555553

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.82  E-value=3.9e-10  Score=58.40  Aligned_cols=41  Identities=20%  Similarity=0.357  Sum_probs=34.0

Q ss_pred             HHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCC
Q psy6598          22 KNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIR   62 (154)
Q Consensus        22 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   62 (154)
                      ..|...|+++++|.|.++.|++.|.....|.+|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34456699999999963349999999999999999998864

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.81  E-value=3.3e-09  Score=49.59  Aligned_cols=30  Identities=30%  Similarity=0.565  Sum_probs=18.2

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      |||.|.+..||+.|.....|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            456664445666666666666666666554

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=4.4e-09  Score=51.55  Aligned_cols=35  Identities=31%  Similarity=0.550  Sum_probs=31.3

Q ss_pred             hcCCCceeCC--CCcccccCchhHHHHHHhhcCcCCC
Q psy6598          58 HSDIRPFICD--RCPRSYRQLCTLNVHKKTNHRESKN   92 (154)
Q Consensus        58 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~   92 (154)
                      |++++||.|.  .|++.|.+.+.|..|+++|.+++++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            5789999999  5999999999999999999887653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.79  E-value=4.3e-09  Score=51.42  Aligned_cols=32  Identities=22%  Similarity=0.449  Sum_probs=18.7

Q ss_pred             hcCCCceeCCC--CcccccCchhHHHHHHhhcCc
Q psy6598          58 HSDIRPFICDR--CPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        58 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      |++++||.|.+  |++.|...+.|..|+++|.++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45556666653  666666666666666665543

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.78  E-value=5.1e-09  Score=49.25  Aligned_cols=31  Identities=16%  Similarity=0.307  Sum_probs=16.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      |+||.|.+..||+.|.....|..|+++|+++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            3555555334555555555555555555543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.77  E-value=6.3e-09  Score=47.91  Aligned_cols=30  Identities=33%  Similarity=0.545  Sum_probs=23.3

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEK   32 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   32 (154)
                      ++||.|.  .||+.|.....|..|++.|++++
T Consensus         1 ~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCD--YCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCC--CCCcccCCHHHHHHHHHHhccCC
Confidence            5778888  88888888888888888777653

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.76  E-value=5.6e-09  Score=50.97  Aligned_cols=36  Identities=25%  Similarity=0.420  Sum_probs=31.4

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIR   62 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   62 (154)
                      .|+++++|.|.++.|++.|.....|.+|+++|++++
T Consensus         2 ~~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            2 DPGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             CSSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            378899999974459999999999999999998864

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3.9e-09  Score=51.44  Aligned_cols=35  Identities=23%  Similarity=0.456  Sum_probs=28.4

Q ss_pred             HHhcCCCceeecccccCcccCCh-hhHHHHhhhhcCCC
Q psy6598          26 RIHSGEKPYVCQVRDCQKRFTEY-SSLYKHTLVHSDIR   62 (154)
Q Consensus        26 ~~h~~~~~~~C~~~~C~~~f~~~-~~l~~H~~~h~~~~   62 (154)
                      ++|+++++|.|..  |++.|... ..|.+|+++|++++
T Consensus         2 ~~h~~~k~~~C~~--C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            2 SSGSSGRAMKCPY--CDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             CSCCCCCCEECSS--SSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCeECCC--CChhhccCHHHHHHHHHhcCCCC
Confidence            3577888888887  88888888 88888888887653

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=7.2e-09  Score=50.05  Aligned_cols=33  Identities=27%  Similarity=0.364  Sum_probs=25.4

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      .|.++++|.|..  |++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQ--CSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSS--SSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCC--CCcccCCHHHHHHHHHHccCC
Confidence            466777888877  888888888888888777765

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=9.3e-09  Score=49.71  Aligned_cols=33  Identities=30%  Similarity=0.573  Sum_probs=26.0

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      .|.++++|.|..  |++.|.....|.+|+++|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHI--CERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSS--SCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCC--CCCccCCHHHHHHHHHHhcCC
Confidence            467778888877  888888888888888888765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=1.1e-08  Score=49.43  Aligned_cols=33  Identities=30%  Similarity=0.435  Sum_probs=25.5

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      .|.++++|.|..  |++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSL--CEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSS--SSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCC--CCchhCCHHHHHHHHHHhccC
Confidence            467778888877  888888888888888877765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=4e-09  Score=51.51  Aligned_cols=34  Identities=26%  Similarity=0.398  Sum_probs=28.0

Q ss_pred             HHhcCCCceeecccccCcccCChhhHHHH-hhhhcCC
Q psy6598          26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKH-TLVHSDI   61 (154)
Q Consensus        26 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~   61 (154)
                      +.|++++||.|..  |++.|.....|..| ++.|+++
T Consensus         2 ~~H~~~k~~~C~~--C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQ--CHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSS--SSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCC--CCcccCCHHHHHHHHHHHccCc
Confidence            4678888899987  99999988888888 7888764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=1.2e-08  Score=56.66  Aligned_cols=35  Identities=14%  Similarity=0.224  Sum_probs=28.8

Q ss_pred             hhcCCCceeCCCCcccccCchhHHHHHHhhcCcCC
Q psy6598          57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESK   91 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~   91 (154)
                      .|.+++||.|..|++.|.+...|..|+++|+++..
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~   41 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTSL   41 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCcc
Confidence            36778889999999999999999999998887543

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.70  E-value=1.2e-08  Score=46.93  Aligned_cols=28  Identities=29%  Similarity=0.650  Sum_probs=18.0

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4566666666666666666666666543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.70  E-value=1.2e-08  Score=46.64  Aligned_cols=28  Identities=21%  Similarity=0.546  Sum_probs=18.8

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3567777777777777777777766554

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.1e-08  Score=49.38  Aligned_cols=33  Identities=30%  Similarity=0.569  Sum_probs=23.7

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      .|.++++|.|..  |++.|.....|.+|+++|+++
T Consensus         3 ~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDM--CGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTT--TCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCc--CCCCcCchHHHHHHHHHhcCC
Confidence            356677777766  777777777777777777665

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.70  E-value=3.6e-10  Score=53.58  Aligned_cols=31  Identities=13%  Similarity=0.151  Sum_probs=18.7

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCce
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPY   34 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   34 (154)
                      |||.|.  .||+.|...+.|..|+++|++++||
T Consensus         1 kp~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACP--ACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSS--SSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCC--CCCcccCCHHHHHHHHHHHccCCCC
Confidence            456666  6666666666666666666665554

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=1.5e-08  Score=48.91  Aligned_cols=32  Identities=31%  Similarity=0.513  Sum_probs=22.3

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      |.++++|.|..  |++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~--C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEY--CNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTT--TCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCC--CCceeCCHHHHHHHHHHhCCC
Confidence            55667777766  777777777777777777654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.69  E-value=6.3e-09  Score=50.65  Aligned_cols=25  Identities=24%  Similarity=0.452  Sum_probs=13.8

Q ss_pred             cCCCceeecccccCcccCChhhHHHHh
Q psy6598          29 SGEKPYVCQVRDCQKRFTEYSSLYKHT   55 (154)
Q Consensus        29 ~~~~~~~C~~~~C~~~f~~~~~l~~H~   55 (154)
                      .|++||.|..  |++.|...+.|.+|+
T Consensus         4 ~gekp~~C~~--CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMCLP--CGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEETT--TTEECSCHHHHHHHH
T ss_pred             CCccCeECCC--CCCccCCHhHccCcC
Confidence            3455555554  555555555555554

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.68  E-value=1.2e-08  Score=46.29  Aligned_cols=28  Identities=29%  Similarity=0.643  Sum_probs=21.5

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSG   30 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~   30 (154)
                      +++|.|.  .||+.|.....|..|++.|++
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCS--VCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECS--SSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCC--CCCcccCCHHHHHHHHHhcCC
Confidence            5778888  888888888888888777753

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.68  E-value=1.1e-08  Score=53.06  Aligned_cols=34  Identities=29%  Similarity=0.579  Sum_probs=25.1

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhh-hhcCCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTL-VHSDIR   62 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~   62 (154)
                      +|+++++|.|.+  |++.|.....|..|++ +|+++.
T Consensus         1 ~Ht~~kp~~C~~--C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDI--CGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTT--TCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCC--cCcccCCHHHHHHHhhhhcCCCC
Confidence            467788888877  8888888888888888 777654

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.68  E-value=1.5e-08  Score=45.61  Aligned_cols=27  Identities=26%  Similarity=0.378  Sum_probs=21.2

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      |+||.|.  .||+.|.....|..|++.|+
T Consensus         1 ek~~~C~--~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCS--LCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCC--CcChhhCCHHHHHHHHHHcc
Confidence            5778888  88888888888888877763

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.68  E-value=1.2e-08  Score=46.64  Aligned_cols=28  Identities=18%  Similarity=0.375  Sum_probs=19.8

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      |||.|.  .||+.|.....|..|++.|+++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACP--ECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECS--SSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCC--CCCchhCCHHHHHHHHHHhcCC
Confidence            467777  7777777777777777777654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.68  E-value=1.9e-08  Score=45.88  Aligned_cols=28  Identities=32%  Similarity=0.560  Sum_probs=21.4

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      +||.|.  .||+.|.....|..|++.|+++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCE--VCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCT--TTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECC--CCCcccCCHHHHHHHHHHhcCC
Confidence            567787  7888888888888887777765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.67  E-value=1.2e-08  Score=46.07  Aligned_cols=27  Identities=30%  Similarity=0.440  Sum_probs=20.8

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      ++||.|.  .||+.|.....|..|++.|+
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCP--LCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEET--TTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCC--CCCcccCCHHHHHHHHHhcC
Confidence            5778888  88888888888888877663

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.65  E-value=1.8e-08  Score=45.98  Aligned_cols=27  Identities=26%  Similarity=0.703  Sum_probs=17.7

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.65  E-value=1.6e-08  Score=46.06  Aligned_cols=28  Identities=21%  Similarity=0.547  Sum_probs=20.3

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            4677777777777777777777777654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.65  E-value=2.2e-08  Score=45.60  Aligned_cols=29  Identities=45%  Similarity=0.784  Sum_probs=21.6

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEK   32 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   32 (154)
                      +||.|.  .|++.|.....|..|++.|++++
T Consensus         1 ~~~~C~--~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCR--ECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECT--TTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCC--CCCCccCChhHHHHHHHHhcCCC
Confidence            567777  77777777777777777777653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.64  E-value=1.9e-08  Score=45.28  Aligned_cols=25  Identities=32%  Similarity=0.853  Sum_probs=17.0

Q ss_pred             CceeCCCCcccccCchhHHHHHHhh
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      +||.|..||+.|.....|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            5667777777777777777776664

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.64  E-value=1.7e-08  Score=45.76  Aligned_cols=26  Identities=19%  Similarity=0.630  Sum_probs=17.1

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      +||.|..|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            46666666666666666666666654

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.64  E-value=2.4e-08  Score=45.84  Aligned_cols=29  Identities=24%  Similarity=0.501  Sum_probs=20.1

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      ++|.|..|++.|.....|..|+++|+++.
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            35777777777777777777777766553

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.63  E-value=1.4e-08  Score=45.86  Aligned_cols=25  Identities=20%  Similarity=0.594  Sum_probs=16.4

Q ss_pred             CceeCCCCcccccCchhHHHHHHhh
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      +||.|..||+.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4666666666666666666666654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.63  E-value=2.2e-08  Score=45.62  Aligned_cols=28  Identities=21%  Similarity=0.532  Sum_probs=18.0

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +||.|..|++.|.....|..|+++|.++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            3566666666666666666666666544

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.61  E-value=2.6e-08  Score=45.69  Aligned_cols=29  Identities=21%  Similarity=0.431  Sum_probs=21.1

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEK   32 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   32 (154)
                      ++|.|.  .||+.|.....|..|++.|++++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQ--YCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCS--SSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCC--CCCCccCCHHHHHHHHHHHccCC
Confidence            467777  77777777777777777776654

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.60  E-value=1.8e-08  Score=49.02  Aligned_cols=24  Identities=25%  Similarity=0.542  Sum_probs=11.8

Q ss_pred             CCCceeCCCCcccccCchhHHHHH
Q psy6598          60 DIRPFICDRCPRSYRQLCTLNVHK   83 (154)
Q Consensus        60 ~~~~~~C~~C~~~f~~~~~l~~H~   83 (154)
                      +++||.|..||+.|.+.+.|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            444444444444444444444444

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=5.2e-09  Score=48.27  Aligned_cols=29  Identities=41%  Similarity=0.880  Sum_probs=22.0

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      ++||.|.  .||+.|.....|..|++.|+++
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCI--HCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4677888  7888888777788887777664

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.59  E-value=2.4e-08  Score=45.47  Aligned_cols=28  Identities=29%  Similarity=0.488  Sum_probs=20.4

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      |||.|.  .||+.|.....|..|++.|+++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCP--HCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCS--SCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCC--CCCcccCCHHHHHHHHHHhccC
Confidence            567777  7777777777777777777664

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.59  E-value=3.9e-08  Score=46.04  Aligned_cols=28  Identities=32%  Similarity=0.748  Sum_probs=16.7

Q ss_pred             CceeCC--CCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICD--RCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +||.|.  .|++.|.....|..|+++|.++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            456665  5666666666666666665543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.57  E-value=3.2e-08  Score=46.04  Aligned_cols=27  Identities=33%  Similarity=0.750  Sum_probs=15.3

Q ss_pred             ceeCC--CCcccccCchhHHHHHHhhcCc
Q psy6598          63 PFICD--RCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        63 ~~~C~--~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      ||.|.  .||+.|.....|..|+++|.++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5666666666666665555443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=6.9e-09  Score=47.57  Aligned_cols=28  Identities=25%  Similarity=0.572  Sum_probs=18.4

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3566777777777777777776666543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.98  E-value=7.2e-09  Score=47.51  Aligned_cols=28  Identities=36%  Similarity=0.616  Sum_probs=20.5

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      |||.|.  .||+.|.....|..|++.|+++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCV--MCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            467777  7777777777777777777654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.56  E-value=5.4e-08  Score=44.30  Aligned_cols=27  Identities=22%  Similarity=0.423  Sum_probs=14.3

Q ss_pred             CeecccccccccccCHHHHHHHHHHhc
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      +|.|.++.||+.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            455554555555555555555555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=4.8e-08  Score=54.13  Aligned_cols=33  Identities=24%  Similarity=0.364  Sum_probs=21.7

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHhhhhcCCC
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIR   62 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   62 (154)
                      |.+++||.|..  |++.|.....|.+|+++|++..
T Consensus         8 ~~~ekpy~C~~--CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            8 LREAGILPCGL--CGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             CCCCCCCCCTT--TCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCccCcCCCC--CCCccCCHHHHHhhhhhhCCCc
Confidence            44566677766  7777777777777776666653

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.56  E-value=3.2e-08  Score=44.40  Aligned_cols=26  Identities=23%  Similarity=0.641  Sum_probs=16.0

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      ||.|..|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35666666666666666666666543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.55  E-value=3.3e-09  Score=50.13  Aligned_cols=30  Identities=27%  Similarity=0.525  Sum_probs=17.5

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcCCCce
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF   64 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   64 (154)
                      ||.|..  |++.|.....|.+|+++|++++||
T Consensus         2 p~~C~~--C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPA--CPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSS--SCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCC--CCcccCCHHHHHHHHHHHccCCCC
Confidence            455655  666666666666666666555554

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.95  E-value=8.8e-09  Score=47.48  Aligned_cols=28  Identities=25%  Similarity=0.682  Sum_probs=18.4

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +||.|..|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4566767777777766777776666543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.50  E-value=2.6e-07  Score=50.84  Aligned_cols=54  Identities=20%  Similarity=0.452  Sum_probs=47.4

Q ss_pred             eeecccccCcccCChhhHHHHhh-hhcCCC------ceeCC--CCcccccCchhHHHHHHhhc
Q psy6598          34 YVCQVRDCQKRFTEYSSLYKHTL-VHSDIR------PFICD--RCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        34 ~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~~~   87 (154)
                      +.|.+.+|++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..|
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            56888889999999999999984 787665      79996  79999999999999999764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.87  E-value=1.6e-08  Score=45.12  Aligned_cols=25  Identities=28%  Similarity=0.834  Sum_probs=17.3

Q ss_pred             CceeCCCCcccccCchhHHHHHHhh
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      +||.|..||+.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3567777777777777777777664

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.46  E-value=8.1e-08  Score=42.97  Aligned_cols=26  Identities=23%  Similarity=0.430  Sum_probs=16.7

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcC
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSG   30 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~   30 (154)
                      ||.|.  .||+.|.....|..|++.|++
T Consensus         1 ~~~C~--~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCG--LCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCS--SSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCC--CCCCcCCCHHHHHHHHHHcCC
Confidence            46666  677766666666666666654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.46  E-value=7.4e-08  Score=44.23  Aligned_cols=26  Identities=23%  Similarity=0.506  Sum_probs=16.0

Q ss_pred             ceeCCCCcccccCchhHHHH-HHhhcC
Q psy6598          63 PFICDRCPRSYRQLCTLNVH-KKTNHR   88 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H-~~~~~~   88 (154)
                      ||.|..|++.|...+.|..| ++.|.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            56666666666666666666 455544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.44  E-value=6.7e-08  Score=44.37  Aligned_cols=28  Identities=29%  Similarity=0.441  Sum_probs=18.0

Q ss_pred             CCeecccccccccccCHHHHHHH-HHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNH-MRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~   31 (154)
                      +||.|.  .||+.|.....|..| ++.|+++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACG--LCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCT--TTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCc--ccCcccCChHHHHHHHHHHccCC
Confidence            466666  666666666666666 4566554

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.78  E-value=3.2e-08  Score=44.08  Aligned_cols=25  Identities=32%  Similarity=0.672  Sum_probs=18.2

Q ss_pred             CCeecccccccccccCHHHHHHHHHHh
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      |||.|.  .||+.|.....|..|++.|
T Consensus         1 kp~~C~--~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCE--RCGKRFVQSSQLANHIRHH   25 (26)
Confidence            567777  7777777777777777665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.33  E-value=3e-07  Score=41.64  Aligned_cols=25  Identities=36%  Similarity=0.745  Sum_probs=14.4

Q ss_pred             ceeCC--CCcccccCchhHHHHHHhhc
Q psy6598          63 PFICD--RCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        63 ~~~C~--~C~~~f~~~~~l~~H~~~~~   87 (154)
                      +|.|.  .|++.|...+.|..|+++|.
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  56666666666666655543

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.68  E-value=1.1e-05  Score=50.36  Aligned_cols=77  Identities=16%  Similarity=0.227  Sum_probs=51.5

Q ss_pred             CCeecccccccccccCHHHHHHHH--HHhcCC-Cceeecc----cccCcccCChhhHHHHhhhhcCCCceeCCCCccccc
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHM--RIHSGE-KPYVCQV----RDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYR   74 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~~----~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   74 (154)
                      +++.|.  .|+..|.+.+.+..|.  +.|... +.+.+..    +.=++.+....    +...+.+...|-|.+|++.|.
T Consensus        31 ~~~~C~--~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           31 SDTQCK--VCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFS  104 (127)
T ss_dssp             CSSEET--TTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECS
T ss_pred             CCCcCc--CCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeC
Confidence            568899  9999999999999998  456432 3333321    00012222111    223456677899999999999


Q ss_pred             CchhHHHHHH
Q psy6598          75 QLCTLNVHKK   84 (154)
Q Consensus        75 ~~~~l~~H~~   84 (154)
                      +...|..|..
T Consensus       105 s~~~~~~H~~  114 (127)
T 1zu1_A          105 SPVVAESHYI  114 (127)
T ss_dssp             SHHHHHHHHT
T ss_pred             CHHHHHHHHC
Confidence            9999999975

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.41  E-value=3e-05  Score=47.92  Aligned_cols=30  Identities=17%  Similarity=0.234  Sum_probs=26.3

Q ss_pred             hhcCCCceeCCCCcccccCchhHHHHHHhh
Q psy6598          57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      .|+|.++|.|..|++.|.+...|..|+++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            578889999999999999999999998753

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.98  E-value=0.0002  Score=44.25  Aligned_cols=29  Identities=21%  Similarity=0.315  Sum_probs=26.4

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhh
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLV   57 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~   57 (154)
                      .|+|.++|.|..  |++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~--C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLA--CARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETT--TTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEccc--CcchhCCHHHHHHHHhh
Confidence            478899999998  99999999999999874

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.86  E-value=0.00079  Score=33.81  Aligned_cols=28  Identities=29%  Similarity=0.354  Sum_probs=20.8

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      -+|.|+.|+..|.....|+.||+..-++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~HmkycCp~   38 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCYCCPE   38 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHHHCTT
T ss_pred             CceeCCcccccccchHHHHhhhhhcCcc
Confidence            4578888888888888888888765444

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.24  E-value=0.014  Score=37.97  Aligned_cols=75  Identities=20%  Similarity=0.337  Sum_probs=41.8

Q ss_pred             cccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          10 DCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        10 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      .|+..+. ...|..|+. .-.-++..|..  |+..+ .+..|..|....-..++..|+.|+..|.. ..|..|...+.|+
T Consensus        89 GC~~~~~-~~~l~~H~~-~C~~~~v~C~~--C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~~~~~~  162 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQA-HCEFALMDCPQ--CQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQNCPLA  162 (170)
T ss_dssp             TCCCEEE-GGGHHHHHT-TCTTSEEECTT--TCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHTTCCC-
T ss_pred             CCCceec-HhHHHHHHh-cCCceeeECCC--CChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHHhCcCh
Confidence            4554433 344556652 23345566643  77666 45556677665556666777777765533 4566776665554


Q ss_pred             C
Q psy6598          90 S   90 (154)
Q Consensus        90 ~   90 (154)
                      .
T Consensus       163 ~  163 (170)
T 3hcs_A          163 L  163 (170)
T ss_dssp             -
T ss_pred             h
Confidence            3

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.03  E-value=0.0075  Score=30.28  Aligned_cols=23  Identities=22%  Similarity=0.449  Sum_probs=14.0

Q ss_pred             CceeecccccCcccCChhhHHHHhh
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTL   56 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~   56 (154)
                      .+|.|..  |+..|.....|.+|++
T Consensus        11 ~~~~CPr--Cn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPR--CNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTT--TCCCCSSHHHHHHHHH
T ss_pred             CceeCCc--ccccccchHHHHhhhh
Confidence            3456644  6666666666666665

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=95.33  E-value=0.02  Score=26.82  Aligned_cols=27  Identities=30%  Similarity=0.480  Sum_probs=20.0

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      .|.|++|.+.|.....|..|-...|.+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            478888888888888888887665544

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.20  E-value=0.047  Score=35.38  Aligned_cols=56  Identities=11%  Similarity=0.098  Sum_probs=43.1

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCCce
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF   64 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   64 (154)
                      +..|+  .|+..+ ....|..|+...-..+.-.|..  |+..+.. ..|..|..++.|..++
T Consensus       110 ~v~C~--~C~~~~-~r~~l~~H~~~~C~~r~~~C~~--C~~~~~~-~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          110 LMDCP--QCQRPF-QKFHINIHILKDCPRRQVSCDN--CAASMAF-EDKEIHDQNCPLALEH  165 (170)
T ss_dssp             EEECT--TTCCEE-EGGGHHHHHHHTCTTCEEECTT--TCCEEEG-GGHHHHHTTCCC----
T ss_pred             eeECC--CCChHH-HHHHHHHHhhhhCCCCCeECCC--CCCccCH-HHHHhHHHhCcChhhh
Confidence            56788  999888 5677999998888888999988  9987755 5679999988887554

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=93.20  E-value=0.055  Score=31.02  Aligned_cols=26  Identities=27%  Similarity=0.600  Sum_probs=21.1

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      .-..|-+||+.|.   .|.+|++++|+..
T Consensus        20 d~iiClecGK~fK---~LkRHL~~~hglt   45 (87)
T 2jsp_A           20 DHIVCLECGGSFK---SLKRHLTTHHSMT   45 (87)
T ss_dssp             SCEECTBTCCEES---BHHHHHHHTTCSC
T ss_pred             CceEecccchhhH---HHHHHHHHccCCC
Confidence            4479999999988   4789999987653

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=91.77  E-value=0.079  Score=29.71  Aligned_cols=39  Identities=21%  Similarity=0.271  Sum_probs=18.0

Q ss_pred             eecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCC
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTE   47 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   47 (154)
                      |.|+  .||.++. +..|..|...-.+-..|.|.-  |++.|..
T Consensus        11 F~C~--~Cgd~lK-K~kv~~H~~~Cr~~~~~SCID--C~~~F~~   49 (79)
T 1wjv_A           11 FTCN--ACGESVK-KIQVEKHVSNCRNCECLSCID--CGKDFWG   49 (79)
T ss_dssp             EEES--SSCCEEE-TTHHHHHHHHCTTCCEEEETT--TTEEEEG
T ss_pred             EEcC--CCCCeee-cccchhHHhhCCCCCcEEecc--cCCeeCC
Confidence            4555  5555443 233555543332333455544  5555553

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.21  E-value=0.35  Score=22.68  Aligned_cols=23  Identities=26%  Similarity=0.495  Sum_probs=13.9

Q ss_pred             CeecccccccccccCHHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      ++.|.  .|+.+|.....+..|.+.
T Consensus         8 ~~~C~--~C~IsF~~l~ty~aHKk~   30 (36)
T 1fu9_A            8 KKYCS--TCDISFNYVKTYLAHKQF   30 (36)
T ss_dssp             CSEET--TTTEECSSHHHHHHHHHH
T ss_pred             cCeec--cccceehhhHHHhhhhee
Confidence            45566  666666666666666543

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=90.44  E-value=0.22  Score=23.42  Aligned_cols=26  Identities=23%  Similarity=0.368  Sum_probs=18.7

Q ss_pred             CCceeCCCCcccccCchhHHHHHHhh
Q psy6598          61 IRPFICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        61 ~~~~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      ...+.|..|.-+|.....+..|++-.
T Consensus         6 ~~~~~C~~C~IsF~~l~ty~aHKk~Y   31 (36)
T 1fu9_A            6 VMKKYCSTCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             CCCSEETTTTEECSSHHHHHHHHHHT
T ss_pred             cCcCeeccccceehhhHHHhhhheec
Confidence            34567777888888777777777653

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=90.27  E-value=0.19  Score=22.86  Aligned_cols=24  Identities=25%  Similarity=0.510  Sum_probs=19.5

Q ss_pred             eeCCCCcccccCchhHHHHHHhhc
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      -.|.+|.+.|+--.+|.+|.+..|
T Consensus        10 qhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            468888888888888888888755

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=88.96  E-value=0.17  Score=28.33  Aligned_cols=29  Identities=31%  Similarity=0.408  Sum_probs=21.9

Q ss_pred             CceeCCCCccccc-------CchhHHHHHHhhcCcC
Q psy6598          62 RPFICDRCPRSYR-------QLCTLNVHKKTNHRES   90 (154)
Q Consensus        62 ~~~~C~~C~~~f~-------~~~~l~~H~~~~~~~~   90 (154)
                      ..-.|.+|++.+.       --+.|.+|++.+|.+.
T Consensus        27 ~~A~Ck~C~k~ls~g~~s~~GTS~L~rHL~~~H~~e   62 (76)
T 2djr_A           27 QYATCRLCGRQVSRGPGVNVGTTALWKHLKSMHREE   62 (76)
T ss_dssp             SCEEESSSCCBCCCCSSCCSSSCHHHHHHHHTTHHH
T ss_pred             CEEECCCCCCccCCCCCCCCchHHHHHHHHHHCHHH
Confidence            3468888888887       2467999999888653

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.61  E-value=0.69  Score=21.49  Aligned_cols=22  Identities=27%  Similarity=0.378  Sum_probs=15.8

Q ss_pred             CeecccccccccccCHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      .|.|+  .|-+.|.+...|..|..
T Consensus         5 GFiCP--~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            5 GFICP--QCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EEECT--TTCCEESSHHHHHHHHH
T ss_pred             ccCCc--HHHHHcCCHHHHHHHHH
Confidence            36677  77777777777777755

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=87.33  E-value=0.52  Score=28.84  Aligned_cols=27  Identities=15%  Similarity=0.443  Sum_probs=17.0

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      .+..|-+  |...|.....+..|++..++
T Consensus        14 ~~~~CLF--Cd~~~~s~~~~l~H~k~~H~   40 (121)
T 1wir_A           14 QHTPCLF--CDRLFASAEETFSHCKLEHQ   40 (121)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHSSC
T ss_pred             CceeEec--CCCcccCHHHHHHHHHHhcC
Confidence            4566666  66666666666666665433

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=85.92  E-value=0.67  Score=25.95  Aligned_cols=57  Identities=16%  Similarity=0.272  Sum_probs=39.6

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCcCCC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRESKN   92 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   92 (154)
                      ..|.|..  ||..+. +..|..|...-.+...|.|-.|++.|.. .....|-.--.....+
T Consensus         9 V~F~C~~--Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~HtsCISEaeKY   65 (79)
T 1wjv_A            9 VFFTCNA--CGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVKCISEGQKY   65 (79)
T ss_dssp             CEEEESS--SCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCCCCSCTTSS
T ss_pred             eEEEcCC--CCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEeeeCChhhee
Confidence            3589988  997765 4568899876666667999999999985 4456664333333333

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=85.06  E-value=0.56  Score=26.83  Aligned_cols=26  Identities=31%  Similarity=0.645  Sum_probs=16.5

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcCCCc
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRP   63 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   63 (154)
                      ...|-.  ||+.|..   |.+|+..|+|..|
T Consensus        21 ~iiCle--cGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           21 HIVCLE--CGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             CEECTB--TCCEESB---HHHHHHHTTCSCH
T ss_pred             ceEecc--cchhhHH---HHHHHHHccCCCH
Confidence            356766  7777764   5577777655544

>2czr_A TBP-interacting protein; tata-binding protein (TBP), hyperthermophilic archaeon, Zn-finger motif, transcription; 2.30A {Thermococcus kodakarensis} SCOP: c.52.4.1

Probab=83.69  E-value=0.53  Score=30.76  Aligned_cols=38  Identities=18%  Similarity=0.472  Sum_probs=27.1

Q ss_pred             hhHHHHhhhhc--CC-----CceeCCCCcccccCchhHHHHHHhhc
Q psy6598          49 SSLYKHTLVHS--DI-----RPFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        49 ~~l~~H~~~h~--~~-----~~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      ..|..|++.-.  |.     .-|+|..||| |.--.+|..||+.|.
T Consensus       133 grlieHlK~~~~~GqDyvFWQFYKCe~CgK-YvDId~~~~Hlk~Hg  177 (226)
T 2czr_A          133 AALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHG  177 (226)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             HHHHHHHHhccccCcceEEEEEEehhhcCc-eecHHHHHHHHHHcC
Confidence            45667766421  22     3489999998 567889999999964

>3sp4_A Aprataxin-like protein; HIT domain, zinc finger, DNA-binding protein, DNA deadenylas hydrolase; 1.80A {Schizosaccharomyces pombe} PDB: 3spd_A* 3spl_A* 3szq_A*

Probab=82.11  E-value=0.87  Score=30.48  Aligned_cols=27  Identities=19%  Similarity=0.453  Sum_probs=23.2

Q ss_pred             CCceeCCCCcccccC-chhHHHHHHhhc
Q psy6598          61 IRPFICDRCPRSYRQ-LCTLNVHKKTNH   87 (154)
Q Consensus        61 ~~~~~C~~C~~~f~~-~~~l~~H~~~~~   87 (154)
                      ..|.+|..|+..|.. ...|+.|+..|-
T Consensus       167 ~~~L~C~~C~~~f~n~~~~LK~HL~~e~  194 (204)
T 3sp4_A          167 QEDLKCWRCGETFGRHFTKLKAHLQEEY  194 (204)
T ss_dssp             GSCCBCTTTCCBCTTCHHHHHHHHHHHH
T ss_pred             CCCceeCCCCchhhcccHHHHHHHHHHH
Confidence            457999999999986 999999998764

>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6

Probab=81.64  E-value=0.6  Score=25.83  Aligned_cols=28  Identities=25%  Similarity=0.450  Sum_probs=21.0

Q ss_pred             CceeCCCCcccccC---chhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQ---LCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~---~~~l~~H~~~~~~~   89 (154)
                      ..-.|..|++.+.+   -++|.+|++.+|.+
T Consensus        28 ~~a~Ck~C~~~l~~~g~TSnL~rHL~~~H~~   58 (73)
T 2ct5_A           28 KKIYCRICMAQIAYSGNTSNLSYHLEKNHPE   58 (73)
T ss_dssp             SCCEETTTTEECCCCSSTHHHHHHHHHSCHH
T ss_pred             CEEECCCCCccccCCCChHhHHHHHHHHCHH
Confidence            45679999887653   46799999988754

>2i5o_A DNA polymerase ETA; zinc finger, DNA polymerase,POL ETA, UBZ, ubiquitin-binding zinc finger, translesion synthesis, ubiquitin-binding domain; HET: DNA; NMR {Homo sapiens}

Probab=80.46  E-value=0.92  Score=21.76  Aligned_cols=23  Identities=17%  Similarity=0.179  Sum_probs=15.5

Q ss_pred             CeecccccccccccCHHHHHHHHHHh
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      .|.|.  .||+.+.. ..+..|...|
T Consensus         9 ~~~C~--~C~~~i~~-~~~~EH~D~H   31 (39)
T 2i5o_A            9 QVPCE--KCGSLVPV-WDMPEHMDYH   31 (39)
T ss_dssp             EEECT--TTCCEEEG-GGHHHHHHHH
T ss_pred             Ccccc--cccCcCCc-ccccchhhHH
Confidence            36777  88877765 4557776665

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=80.20  E-value=0.63  Score=23.97  Aligned_cols=19  Identities=21%  Similarity=0.609  Sum_probs=12.1

Q ss_pred             eecccccCcccCChhhHHHHh
Q psy6598          35 VCQVRDCQKRFTEYSSLYKHT   55 (154)
Q Consensus        35 ~C~~~~C~~~f~~~~~l~~H~   55 (154)
                      .|.+  |+..|..+..|+.|+
T Consensus        15 eC~l--C~vkYs~r~slqDHI   33 (55)
T 2yrk_A           15 ECTL--CGVKYSARLSIRDHI   33 (55)
T ss_dssp             CCTT--TTCCCCSSSCHHHHH
T ss_pred             cccc--cCcccccccchhhhh
Confidence            5666  666666666666665

>4i1l_A Scurfin, forkhead box protein P3; FOXP3, dimerization, complex ensemble, stability, regulatory activity, acetyation, DNA-binding, metal-binding; 2.10A {Mus musculus}

Probab=80.15  E-value=0.68  Score=26.62  Aligned_cols=23  Identities=13%  Similarity=0.203  Sum_probs=14.4

Q ss_pred             ecccccccccccCHHHHHHHHHH
Q psy6598           5 FYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         5 ~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      .|.|+.|++.|.+...+..|+..
T Consensus        14 ~CkWPGCe~~~ed~~~FlkHL~~   36 (93)
T 4i1l_A           14 VCKWPGCEKVFEEPEEFLKHCQA   36 (93)
T ss_dssp             ----CCSTTTTHHHHHHHHHHHH
T ss_pred             cccCCCCCCcccCHHHHHHHhhc
Confidence            37777888888777777777663

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	154
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-08
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	7e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	7e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	7e-05
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	3e-06
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-04
d2glia5	29	g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo	2e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-04
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	8e-04
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	4e-04
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-04
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	7e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.001
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	0.002

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.7 bits (105), Expect = 7e-08
 Identities = 18/55 (32%), Positives = 26/55 (47%), Gaps = 3/55 (5%)

Query: 31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT 85
          +K Y CQ   C K FT  S   +H  +H  +RP+ C  C + ++    L  H K 
Sbjct: 1  DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI 52

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 7e-04
 Identities = 18/52 (34%), Positives = 24/52 (46%), Gaps = 2/52 (3%)

Query: 7  FPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
          +P  C  SF   +    HM +H G +PY C V  C K+F     L  H  +H
Sbjct: 4  YPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH 53

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.6 bits (103), Expect = 1e-07
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 2/35 (5%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
            R  +G KP+ C   DC + F+    L  H   H
Sbjct: 2  STRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 7e-04
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 54 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT 85
           T   + I+PF C  C RS+ +   L +H+K 
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRKR 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.6 bits (101), Expect = 3e-07
 Identities = 17/33 (51%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          IHSGEKPY C   +C K F+  S L +H  VH+
Sbjct: 1  IHSGEKPYGCV--ECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.001
 Identities = 7/29 (24%), Positives = 16/29 (55%)

Query: 57 VHSDIRPFICDRCPRSYRQLCTLNVHKKT 85
          +HS  +P+ C  C +++ +   L  H++ 
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQHQRV 29

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (100), Expect = 3e-07
 Identities = 10/36 (27%), Positives = 14/36 (38%), Gaps = 2/36 (5%)

Query: 24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
                  + Y C   +C K F+  S L KH   H+
Sbjct: 3  SEWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.1 bits (73), Expect = 0.002
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE 89
          +      + R + CD C +S+     L+ H++T+  E
Sbjct: 2  RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (99), Expect = 4e-07
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD 60
          R H+GEKPY C    C K F +   L  H   + D
Sbjct: 1  RTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 6e-04
 Identities = 10/34 (29%), Positives = 19/34 (55%)

Query: 57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRES 90
           H+  +P+ C  C +++RQ   L++H K  H  +
Sbjct: 2  THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 7e-07
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 2/33 (6%)

Query: 26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH 58
          R HSGEKPY C    C  RFT+  ++  H L  
Sbjct: 1  RTHSGEKPYECY--ICHARFTQSGTMKMHILQK 31

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.6 bits (75), Expect = 0.001
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE 89
           HS  +P+ C  C   + Q  T+ +H    H E
Sbjct: 2  THSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.3 bits (94), Expect = 2e-06
 Identities = 7/37 (18%), Positives = 12/37 (32%)

Query: 23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          +       +K + C    C K F    ++  H   H 
Sbjct: 8  DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHL 44

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.4 bits (84), Expect = 7e-05
 Identities = 7/31 (22%), Positives = 14/31 (45%)

Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEK 32
          K F      C  +F    N ++H++ H  ++
Sbjct: 17 KTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 3e-06
 Identities = 10/28 (35%), Positives = 16/28 (57%)

Query: 10 DCKISFASATNYKNHMRIHSGEKPYVCQ 37
           C  SF    + K HM++HS  + Y+C+
Sbjct: 8  ACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.4 bits (87), Expect = 2e-05
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 34 YVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICD 67
          + C    C K F     L +H  +HSD R +IC+
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 1e-05
 Identities = 9/30 (30%), Positives = 17/30 (56%), Gaps = 1/30 (3%)

Query: 10 DCKISFASATNYKNHMR-IHSGEKPYVCQV 38
           C   F+   +   H++ +H+ E+P+ CQV
Sbjct: 10 SCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 1e-05
 Identities = 16/40 (40%), Positives = 19/40 (47%), Gaps = 3/40 (7%)

Query: 29 SGEKPYVCQVRDCQKRFTEYSSLYKHT-LVHSDIRPFICD 67
          S  KPY+CQ   C K F+    L  H   VH+  RP  C 
Sbjct: 1  SVGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 36.9 bits (86), Expect = 3e-05
 Identities = 9/29 (31%), Positives = 12/29 (41%)

Query: 31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          ++PY C    C K F     L +H   H 
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ 29

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 1e-04
 Identities = 12/33 (36%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD 60
           SG++P+VC+   C   FT  ++  +H  VH+D
Sbjct: 2  SSGKRPFVCR--ICLSAFTTKANCARHLKVHTD 32

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.8 bits (80), Expect = 2e-04
 Identities = 14/27 (51%), Positives = 18/27 (66%)

Query: 32 KPYVCQVRDCQKRFTEYSSLYKHTLVH 58
          KPYVC++  C KR+T+ SSL KH    
Sbjct: 1  KPYVCKLPGCTKRYTDPSSLRKHVKTV 27

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.2 bits (79), Expect = 3e-04
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 32 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          +P++C    C KRFT    L +H   H+
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHT 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 8e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 2  KPFFYFPWDCKISFASATNYKNHMRIHSGEK 32
          +PF      C   F  +   + H R H+GEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.8 bits (78), Expect = 4e-04
 Identities = 10/28 (35%), Positives = 17/28 (60%)

Query: 32 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          +PY C V  C +RF+  + L +H  +H+
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHT 28

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 4e-04
 Identities = 8/28 (28%), Positives = 14/28 (50%)

Query: 32 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          KP+ C    C+K ++   +L  H   H+
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHT 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 7e-04
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 32 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          +PYVC    C K+F + ++L  H L H+
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.6 bits (75), Expect = 0.001
 Identities = 8/29 (27%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          +KP+ C+   C + F+    L  H   H+
Sbjct: 1  QKPFQCR--ICMRNFSRSDHLTTHIRTHT 27

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.002
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 32 KPYVCQVRDCQKRFTEYSSLYKHTLVHS 59
          KP+ C    C KRF+   +L  H  +H+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHT 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	154
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.77
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.77
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.52
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.5
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.45
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.45
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.44
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.42
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.42
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.4
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.4
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.36
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.36
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.36
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.34
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.33
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.32
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.3
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.3
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.29
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.29
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.28
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.28
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.28
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.27
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.27
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.26
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.24
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.24
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.24
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.22
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.18
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.16
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.16
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.14
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.14
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.13
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.13
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.11
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.09
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.79
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.79
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.7
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.64
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.6
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.59
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.53
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.53
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.52
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.5
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.41
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.37
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.36
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.34
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.33
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.31
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.27
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.26
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.23
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.2
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.12
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.07
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.06
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	98.06
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	98.04
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.0
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.96
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.96
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.88
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.86
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.84
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.82
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.82
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.82
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.79
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.77
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.74
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.73
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.72
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.71
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.68
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.61
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.6
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.57
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.53
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.52
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.45
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.44
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.4
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	97.26
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.22
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.11
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.95
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.91
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.88
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.71
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	96.57
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.42
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.38
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.32
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.14
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	95.97
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.96
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.91
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.83
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.83
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	95.81
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	95.68
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.42
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.22
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	95.06
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.93
d1y0jb1	36	U-shaped transcription factor, different fingers {	94.63
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.35
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	93.48
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	93.03
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.86
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	92.83
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.81
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.62
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.27
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	91.58
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	90.47
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	90.44
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	89.92
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	89.71
d1x3ca1	61	Zinc finger protein 292, ZNF292 {Human (Homo sapie	89.54
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	89.1
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	88.9
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	87.47
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	86.82
d2czra1	218	TBP-interacting protein {Thermococcus kodakaraensi	86.76
d1wjpa3	41	Zinc finger protein 295, ZNF295 {Human (Homo sapie	85.38
d1wira_	121	Protein arginine N-methyltransferase 3 {Mouse (Mus	85.31
d1fu9a_	36	U-shaped transcription factor, different fingers {	82.7

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.7e-19  Score=95.58  Aligned_cols=51  Identities=33%  Similarity=0.615  Sum_probs=27.4

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcccccCchhHHHHHHh
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      +||.| .  ||+.|.....|..|+++|++++||.|..||++|...+.|..||++
T Consensus         2 K~y~C-~--Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~   52 (53)
T d2csha1           2 KLYPC-Q--CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKI   52 (53)
T ss_dssp             CCEEC-T--TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTT
T ss_pred             cCCCC-C--CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhc
Confidence            45555 3  555555555555555555555555555555555555555555544

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=2.2e-19  Score=95.17  Aligned_cols=53  Identities=34%  Similarity=0.610  Sum_probs=51.2

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhh
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVH   58 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   58 (154)
                      ||||+|+   ||++|.....|..|+++|+|++||.|..  ||++|.....|.+|+++|
T Consensus         1 EK~y~C~---Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT---TSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC---CCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            7999995   9999999999999999999999999998  999999999999999887

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.52  E-value=4e-15  Score=72.38  Aligned_cols=35  Identities=29%  Similarity=0.729  Sum_probs=23.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHH-HhcCCCceeec
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMR-IHSGEKPYVCQ   37 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~   37 (154)
                      +|||+|.  .||+.|...+.|.+|++ +|+|++||.|+
T Consensus         3 ~Kpy~C~--~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECS--SSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCC--CCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            4667777  77777777777777754 57777777664

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.50  E-value=1.7e-15  Score=73.80  Aligned_cols=37  Identities=24%  Similarity=0.581  Sum_probs=29.0

Q ss_pred             HHhhhhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          53 KHTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        53 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +|+++|++++||.|..||++|.+.++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4677788888888888888888888888888887764

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.2e-14  Score=68.78  Aligned_cols=34  Identities=29%  Similarity=0.676  Sum_probs=25.5

Q ss_pred             hhhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          56 LVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        56 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      |+|+|++||+|..||++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4677777777777777777777777777777654

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=2.6e-14  Score=66.81  Aligned_cols=33  Identities=24%  Similarity=0.607  Sum_probs=21.0

Q ss_pred             hhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          57 VHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        57 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +|++++||.|..||++|.+.+.|..|+++|.++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            356666666666666666666666666666553

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.44  E-value=2.1e-14  Score=69.35  Aligned_cols=35  Identities=31%  Similarity=0.586  Sum_probs=27.4

Q ss_pred             HhhhhcCCCceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          54 HTLVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        54 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      |.++|+|++||+|..|++.|.+.++|..|+++|..
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            66778888888888888888888888888877643

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=4.4e-14  Score=67.45  Aligned_cols=34  Identities=32%  Similarity=0.624  Sum_probs=19.3

Q ss_pred             eecccccccccccCHHHHHHHHHHhcCCCceeec
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQ   37 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   37 (154)
                      |.|+++.||++|.....|++|+++|+|++||.|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            4555444555555555555555555555555553

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=4.6e-14  Score=67.55  Aligned_cols=34  Identities=29%  Similarity=0.542  Sum_probs=28.3

Q ss_pred             hhhcCCCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          56 LVHSDIRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        56 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      ++|+|++||.|++|++.|.+.++|..|++.+|++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~~   34 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHTE   34 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccCC
Confidence            4688888888888888888888888888777654

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=6.8e-14  Score=66.79  Aligned_cols=36  Identities=33%  Similarity=0.669  Sum_probs=33.5

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcCCCceeCCC
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDR   68 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   68 (154)
                      .|.|.+++|++.|.++..|.+|+++|+|++||.|+.
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            378999999999999999999999999999999973

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.40  E-value=1.1e-13  Score=67.21  Aligned_cols=37  Identities=41%  Similarity=0.753  Sum_probs=32.7

Q ss_pred             CCCceeecccccCcccCChhhHHHHhh-hhcCCCceeCCC
Q psy6598          30 GEKPYVCQVRDCQKRFTEYSSLYKHTL-VHSDIRPFICDR   68 (154)
Q Consensus        30 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~   68 (154)
                      .+|||.|..  ||+.|.....|.+|++ +|++++||.|.+
T Consensus         2 ~~Kpy~C~~--Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQS--CGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSS--SCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCC--CCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            468999988  9999999999999976 799999999974

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=2.2e-13  Score=64.43  Aligned_cols=31  Identities=26%  Similarity=0.528  Sum_probs=21.1

Q ss_pred             hcCCCceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          58 HSDIRPFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        58 h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      |+|++||+|.+|++.|.+.++|..|+++|..
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            5667777777777777777777777766643

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=3.6e-14  Score=68.98  Aligned_cols=37  Identities=27%  Similarity=0.457  Sum_probs=33.8

Q ss_pred             HHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          23 NHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        23 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      +|+++|++++||.|..  ||++|...+.|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~--CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSS--SCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCC--CCceeeCHHHHHHhCccCCCC
Confidence            4778899999999988  999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=2.2e-13  Score=61.10  Aligned_cols=28  Identities=32%  Similarity=0.629  Sum_probs=24.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSG   30 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~   30 (154)
                      ||||+|.  .||++|...+.|..|+++|+|
T Consensus         1 EKPy~C~--~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCR--ICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCC--CCcCEecccccccccCCCccC
Confidence            7889999  899999999999999888876

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.34  E-value=3.5e-13  Score=62.92  Aligned_cols=33  Identities=52%  Similarity=0.836  Sum_probs=27.8

Q ss_pred             HhcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          27 IHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        27 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      +|+|++||.|..  ||++|...+.|..|+++|+|+
T Consensus         1 IHTgekpy~C~~--Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSS--SCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCC--CCCEeCchHHhHhhccccCCC
Confidence            478888888877  888888888888888888875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.33  E-value=5.9e-14  Score=71.20  Aligned_cols=39  Identities=18%  Similarity=0.363  Sum_probs=23.3

Q ss_pred             hHHHHhhhhcCCCceeCCC--CcccccCchhHHHHHHhhcCc
Q psy6598          50 SLYKHTLVHSDIRPFICDR--CPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        50 ~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      .|.+|+. |.+++||.|.+  |++.|.+.++|..|+++|.++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            3444443 66666666655  666666666666666666655

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=4.5e-13  Score=61.70  Aligned_cols=31  Identities=32%  Similarity=0.581  Sum_probs=20.0

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEK   32 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   32 (154)
                      |||.|+++.||+.|...++|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5666665566666666666666666666653

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.30  E-value=5.8e-13  Score=59.71  Aligned_cols=28  Identities=29%  Similarity=0.611  Sum_probs=19.2

Q ss_pred             CCceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          61 IRPFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        61 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      +|||+|..|++.|.+.+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            4667777777777777777777777654

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.30  E-value=7.6e-13  Score=60.02  Aligned_cols=29  Identities=34%  Similarity=0.578  Sum_probs=22.6

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEK   32 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   32 (154)
                      |||.|+  .||+.|...+.|.+|+++|+|++
T Consensus         1 kp~~C~--~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCC--CCCCCCCCchHcccccCcccCCC
Confidence            677887  78888888888888888887764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.1e-12  Score=59.72  Aligned_cols=30  Identities=37%  Similarity=0.585  Sum_probs=20.6

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      |||+|.++.||++|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            567777555777777777777777777664

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.1e-12  Score=59.80  Aligned_cols=30  Identities=37%  Similarity=0.625  Sum_probs=20.5

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      |||.|.++.||++|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            567776555777777777777777777664

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.1e-12  Score=62.71  Aligned_cols=34  Identities=41%  Similarity=0.680  Sum_probs=30.6

Q ss_pred             HHhcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        26 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      |+|+|++||.|..  ||++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~--C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSS--SSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCC--CCCCcCCHhHHHHhCcccCCC
Confidence            5799999999988  999999999999999999865

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.28  E-value=1e-12  Score=59.59  Aligned_cols=28  Identities=29%  Similarity=0.733  Sum_probs=17.0

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +||.|++|++.|.+.+.|..|+++|+++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4566666666666666666666666554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.28  E-value=4.4e-13  Score=64.59  Aligned_cols=35  Identities=29%  Similarity=0.492  Sum_probs=32.4

Q ss_pred             HHHHhcCCCceeecccccCcccCChhhHHHHhhhhcC
Q psy6598          24 HMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        24 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      |.|.|+|++||.|..  |++.|..++.|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~--C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTT--TCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCC--CCCEecCHHHHHHHHhcCcC
Confidence            678999999999988  99999999999999999964

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.27  E-value=3.7e-13  Score=68.18  Aligned_cols=43  Identities=19%  Similarity=0.388  Sum_probs=38.4

Q ss_pred             HHHHHHHHHhcCCCceeecccccCcccCChhhHHHHhhhhcCCC
Q psy6598          19 TNYKNHMRIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIR   62 (154)
Q Consensus        19 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   62 (154)
                      ..|..|+. |+|++||.|.+++|++.|...+.|..|+++|+|++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34666764 99999999998899999999999999999999985

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=1.3e-12  Score=60.06  Aligned_cols=31  Identities=32%  Similarity=0.715  Sum_probs=24.4

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcCCC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIR   62 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   62 (154)
                      +||.|.+++|++.|...+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5778877778888888888888888887764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=1.6e-12  Score=58.85  Aligned_cols=29  Identities=24%  Similarity=0.520  Sum_probs=22.2

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEK   32 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   32 (154)
                      |||.|.  .||+.|...+.|..|+++|+|++
T Consensus         1 Kpy~C~--~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACP--ECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCT--TTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECC--cCCCeecchHHhhhhcCccCCcC
Confidence            577777  77777777777777777777764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.1e-12  Score=58.45  Aligned_cols=28  Identities=29%  Similarity=0.680  Sum_probs=18.1

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      |||.|.+||+.|.+.+.|..|+++|.++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4566666666666666666666666655

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.2e-12  Score=58.75  Aligned_cols=30  Identities=27%  Similarity=0.573  Sum_probs=21.1

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      |||.|.+++|++.|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            467777777777777777777777777664

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.24  E-value=2.2e-12  Score=58.81  Aligned_cols=30  Identities=33%  Similarity=0.655  Sum_probs=21.3

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      |||.|.+++|++.|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            467777777777777777777777777664

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=3.9e-12  Score=60.08  Aligned_cols=32  Identities=38%  Similarity=0.833  Sum_probs=25.0

Q ss_pred             hcCCCceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          28 HSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        28 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      |+|++||.|.+  |++.|..+..|.+|+++|++.
T Consensus         2 ~TGekPy~C~~--C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRI--CLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSS--SCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCC--CCCcccChHHHHHHccccCCc
Confidence            57788888877  888888888888888887654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.18  E-value=5.7e-12  Score=56.80  Aligned_cols=29  Identities=28%  Similarity=0.645  Sum_probs=16.0

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSG   30 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~   30 (154)
                      |||+|.++.||++|...+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            45555544555555555555555555543

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.16  E-value=7.1e-12  Score=56.49  Aligned_cols=29  Identities=34%  Similarity=0.929  Sum_probs=24.0

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      |||.|.+++|++.|.+.+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            57888888888888888888888888875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=1e-11  Score=57.31  Aligned_cols=29  Identities=17%  Similarity=0.323  Sum_probs=16.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      ||||.|.++.||+.|...++|.+|+++|+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            45555554445555555555555555554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.14  E-value=1.5e-11  Score=56.72  Aligned_cols=30  Identities=30%  Similarity=0.762  Sum_probs=22.9

Q ss_pred             CCceeecccccCcccCChhhHHHHhhhhcC
Q psy6598          31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        31 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      ++||.|.+++|++.|.+.+.|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            467778777788888888888888777764

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1e-11  Score=54.23  Aligned_cols=25  Identities=24%  Similarity=0.644  Sum_probs=16.9

Q ss_pred             CceeCCCCcccccCchhHHHHHHhh
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      |||+|..|||.|...+.|..|+++|
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCC
Confidence            4666666666666666666666665

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.4e-11  Score=53.76  Aligned_cols=26  Identities=35%  Similarity=0.756  Sum_probs=20.5

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhc
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      |||+|.  .||++|...+.|..|+++|+
T Consensus         1 KPy~C~--eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCL--ECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECS--SSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCC--CCcCeeccCcccccCccCCC
Confidence            678888  88888888888888887774

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=1.3e-11  Score=58.83  Aligned_cols=33  Identities=45%  Similarity=0.887  Sum_probs=27.6

Q ss_pred             HHhcCCCceeecccccCcccCChhhHHHHhhhhcC
Q psy6598          26 RIHSGEKPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        26 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      ++|+|++||.|.+  |++.|..+..|.+|++.+++
T Consensus         1 R~HTgekP~~C~~--C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYI--CHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTT--TCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCC--CcccccchHHHHHHcccccC
Confidence            4689999999988  99999999999999765443

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=1.2e-11  Score=55.10  Aligned_cols=26  Identities=42%  Similarity=0.965  Sum_probs=12.3

Q ss_pred             ceeecccccCcccCChhhHHHHhhhh
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVH   58 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h   58 (154)
                      ||.|.+++|++.|.+.+.|.+|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            44444444444444444444444444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.3e-11  Score=54.97  Aligned_cols=28  Identities=32%  Similarity=0.554  Sum_probs=26.6

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhc
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      |||.|.++.||++|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            7999998899999999999999999985

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.5e-09  Score=45.07  Aligned_cols=26  Identities=35%  Similarity=0.581  Sum_probs=18.4

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcC
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSG   30 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~   30 (154)
                      |++|+  .|++.|..+..|..|++.|+|
T Consensus         1 phkc~--~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCE--VCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBT--TTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccc--hhhhHhcchhHHHHHhhccCC
Confidence            56677  777777777777777777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.4e-09  Score=45.13  Aligned_cols=25  Identities=20%  Similarity=0.587  Sum_probs=15.0

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhc
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      |++|..|++.|++++.|..|||.|+
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~ht   25 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHT   25 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccC
Confidence            3456666666666666666666554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=6.2e-09  Score=44.56  Aligned_cols=25  Identities=32%  Similarity=0.695  Sum_probs=14.4

Q ss_pred             CceeCCCCcccccCchhHHHHHHhh
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      +||.|.+||+.|.+.+...+|.++|
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCcccchhhhhhhcchhhhhhhhhc
Confidence            4555555555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.64  E-value=1.2e-08  Score=43.67  Aligned_cols=26  Identities=38%  Similarity=0.562  Sum_probs=16.9

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHh
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      ||||.|+  .||+.|.......+|.++|
T Consensus         1 EkPf~C~--~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACD--ICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccc--hhhhhhhcchhhhhhhhhc
Confidence            5666666  6666666666666666665

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=1.7e-08  Score=42.89  Aligned_cols=29  Identities=24%  Similarity=0.502  Sum_probs=23.9

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      |+||+|+  .|.......+.|..|++.|+|+
T Consensus         1 erpfkcq--lcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQ--ICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceee--ecccccCCchheEEeeecccCc
Confidence            6788888  8888888888888888888764

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.59  E-value=1.4e-08  Score=44.08  Aligned_cols=29  Identities=14%  Similarity=0.494  Sum_probs=24.0

Q ss_pred             CCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          61 IRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        61 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      ++||.|++|+..|.+++.+..|.+.|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            47888888888888888888888887654

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=4.4e-08  Score=42.48  Aligned_cols=29  Identities=28%  Similarity=0.524  Sum_probs=25.2

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      ||||.|+  .|+..|+.+..+..|.+.|.|.
T Consensus         1 ekp~~cp--ic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCP--VCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEET--TTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccc--hHHHHhhccccceEeeecccCc
Confidence            6889999  9999999999999999888764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.53  E-value=4e-08  Score=42.60  Aligned_cols=24  Identities=54%  Similarity=1.014  Sum_probs=10.3

Q ss_pred             ceeecccccCcccCChhhHHHHhh
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTL   56 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~   56 (154)
                      ||.|.+++|++.++..++|+.|++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k   25 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVK   25 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHH
T ss_pred             CeecccCCCCcccCCHHHHHHHHH
Confidence            344444444444444444444444

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=3e-08  Score=44.01  Aligned_cols=30  Identities=33%  Similarity=0.757  Sum_probs=17.1

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcCCCce
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPF   64 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   64 (154)
                      ...|..  ||+.|..-.+|.+|..+|.++|||
T Consensus         5 ~~~ce~--cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           5 QVACEI--CGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             SEEETT--TTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhHHH--HHHHHHHHHHHHhhhcccCCCCCC
Confidence            345555  555555555555555555555555

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=5.6e-08  Score=43.12  Aligned_cols=31  Identities=35%  Similarity=0.475  Sum_probs=27.0

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCce
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPY   34 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   34 (154)
                      |..-|+  .||+.|.+...|.+|...|++++||
T Consensus         4 k~~~ce--~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACE--ICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEET--TTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHH--HHHHHHHHHHHHHhhhcccCCCCCC
Confidence            446688  9999999999999999999999987

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=9.2e-08  Score=40.55  Aligned_cols=27  Identities=37%  Similarity=0.778  Sum_probs=15.6

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      +||+|..|...-...+.|..|+|+|++
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            455665565555555556666655554

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.37  E-value=1.6e-07  Score=40.07  Aligned_cols=28  Identities=36%  Similarity=0.846  Sum_probs=15.8

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcC
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      ||.|...+|.++|.+.-+|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            4555555555555555555555555554

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=2.2e-07  Score=40.24  Aligned_cols=29  Identities=17%  Similarity=0.470  Sum_probs=26.1

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSG   30 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~   30 (154)
                      |||.|.-..|+++|.+.+.|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            79999977799999999999999997654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.34  E-value=2.8e-07  Score=39.12  Aligned_cols=27  Identities=22%  Similarity=0.423  Sum_probs=14.3

Q ss_pred             CCeecccccccccccCHHHHHHHHHHh
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      .||+|.+..|++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            355555555555555555555555544

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.33  E-value=2e-07  Score=39.29  Aligned_cols=20  Identities=50%  Similarity=0.828  Sum_probs=9.9

Q ss_pred             cCcccCChhhHHHHhhhhcC
Q psy6598          41 CQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        41 C~~~f~~~~~l~~H~~~h~~   60 (154)
                      ||++|...+.|.+|+..|+|
T Consensus         8 cgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           8 CGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             TCCEESSHHHHHHHGGGTSC
T ss_pred             HhHHHHHHHHHHHHhhcccC
Confidence            55555555555555444444

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.31  E-value=2.9e-07  Score=39.09  Aligned_cols=27  Identities=44%  Similarity=0.789  Sum_probs=22.6

Q ss_pred             CceeecccccCcccCChhhHHHHhhhh
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVH   58 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   58 (154)
                      .||.|...+|++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            578888888888888888888888776

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.27  E-value=3.2e-07  Score=39.16  Aligned_cols=30  Identities=33%  Similarity=0.511  Sum_probs=28.2

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      |||.|.+..|.+.|.+...|.+|...|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            799999999999999999999999999875

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.26  E-value=4.6e-07  Score=38.14  Aligned_cols=28  Identities=25%  Similarity=0.572  Sum_probs=21.6

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      +.+.|.  .||++|...+.|++|...|+|+
T Consensus         1 r~hvc~--ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           1 RVHVCA--ECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CCEECT--TTCCEESSHHHHHHHGGGTSCC
T ss_pred             CcchHH--HHhHHHHHHHHHHHHhhcccCC
Confidence            346778  8888888888888888888764

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=3.2e-07  Score=40.04  Aligned_cols=28  Identities=43%  Similarity=0.796  Sum_probs=18.2

Q ss_pred             CceeecccccCcccCChhhHHHHh-hhhc
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHT-LVHS   59 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~   59 (154)
                      +||.|.+++|.++|...+.-..|+ ++|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            466676666777777666666665 5554

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=8.2e-07  Score=37.75  Aligned_cols=28  Identities=21%  Similarity=0.477  Sum_probs=20.7

Q ss_pred             CeecccccccccccCHHHHHHHHHHhcCCC
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHSGEK   32 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   32 (154)
                      .|.|+  .||......+-|+.|++.|++++
T Consensus         1 kYvC~--~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           1 KYICE--ECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             Ccccc--ccCcccCCHHHHHHHHHHhcCCC
Confidence            36777  77777777777777777777653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=1.4e-06  Score=36.50  Aligned_cols=26  Identities=35%  Similarity=0.674  Sum_probs=22.7

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhc
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      |||+|.  .|...-...+.|..|+++|.
T Consensus         2 kp~kck--~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCK--TCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccc--cccchhcchhhHhhhhhccc
Confidence            789999  99988888899999988885

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.07  E-value=1.2e-06  Score=39.60  Aligned_cols=30  Identities=33%  Similarity=0.442  Sum_probs=21.0

Q ss_pred             CCeecccccccc---cccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKI---SFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~---~f~~~~~l~~H~~~h~~~   31 (154)
                      |.|.|.|..|.+   .|.....|..|+|.|+|+
T Consensus         1 k~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           1 KEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             SCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            457777777764   477777777777777764

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.06  E-value=2e-06  Score=35.62  Aligned_cols=26  Identities=38%  Similarity=0.443  Sum_probs=22.1

Q ss_pred             ecccccccccccCHHHHHHHHHHhcCCC
Q psy6598           5 FYFPWDCKISFASATNYKNHMRIHSGEK   32 (154)
Q Consensus         5 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~   32 (154)
                      +|+  .|.++|.++..|+.|-+.|+|++
T Consensus         2 qcp--~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECP--TCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCT--TTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCc--chHHHHHHhHhhhhccccccCCC
Confidence            577  89999999999999988888874

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=98.06  E-value=2.7e-06  Score=39.48  Aligned_cols=28  Identities=29%  Similarity=0.678  Sum_probs=18.9

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +.|.|.+|++.|.+..+|--||+.|..+
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            4577777777777777777777666444

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=1.9e-06  Score=39.68  Aligned_cols=30  Identities=33%  Similarity=0.720  Sum_probs=25.2

Q ss_pred             CCCceeecccccCcccCChhhHHHHhhhhc
Q psy6598          30 GEKPYVCQVRDCQKRFTEYSSLYKHTLVHS   59 (154)
Q Consensus        30 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   59 (154)
                      .++||.|..++|+..|.+..+|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            378899988889999999998888887774

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=2.4e-06  Score=35.40  Aligned_cols=26  Identities=23%  Similarity=0.528  Sum_probs=19.4

Q ss_pred             eCCCCcccccCchhHHHHHHhhcCcC
Q psy6598          65 ICDRCPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        65 ~C~~C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      +|+.|.+.|.++..|..|-|.|++++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            57777777777777777777777653

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=3.6e-06  Score=39.33  Aligned_cols=28  Identities=18%  Similarity=0.548  Sum_probs=22.2

Q ss_pred             cCCCceeCCCCcccccCchhHHHHHHhh
Q psy6598          59 SDIRPFICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        59 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      +|.|||.|..|+|.|...+++.+|....
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~~C   28 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVTSC   28 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhhhh
Confidence            4678888888888888888888886543

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=3.3e-06  Score=35.97  Aligned_cols=28  Identities=36%  Similarity=0.664  Sum_probs=22.9

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      +||+|.+|...-.+.++|..|++..|++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~D   28 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHGD   28 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCcccceecccccCcchHHHHHHHHccC
Confidence            4788888888888888888888887764

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=4.9e-06  Score=34.82  Aligned_cols=25  Identities=24%  Similarity=0.615  Sum_probs=18.9

Q ss_pred             CceeCCCCcccccCchhHHHHHHhh
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTN   86 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~   86 (154)
                      +||+|..|...-.-.++|.+|+|+|
T Consensus         2 kp~kck~cdyaaadsssl~kh~rih   26 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIH   26 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHS
T ss_pred             CCcccccccchhcchhhHhhhhhcc
Confidence            5777777777777777777777775

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=6.3e-06  Score=34.98  Aligned_cols=23  Identities=30%  Similarity=0.668  Sum_probs=18.3

Q ss_pred             ceeCCCCcccccCchhHHHHHHh
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      ||.|..|+..|..+.+|.+||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            57788888888888888888775

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.84  E-value=2.8e-06  Score=36.99  Aligned_cols=29  Identities=31%  Similarity=0.573  Sum_probs=25.5

Q ss_pred             CCeecccccccccccCHHHHHHHH-HHhcC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHM-RIHSG   30 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~-~~h~~   30 (154)
                      |||.|+.+.|.|.|...+.-..|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            799999888999999999999997 77754

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.82  E-value=8.7e-06  Score=37.72  Aligned_cols=27  Identities=30%  Similarity=0.680  Sum_probs=15.8

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      +.|.|.+  |++.|.+...|-.|++.|..
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTTCC
T ss_pred             CccCCCC--CCCccCCcccccchHhhhcc
Confidence            4456655  66666666666666665543

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=8.4e-06  Score=34.56  Aligned_cols=26  Identities=38%  Similarity=0.713  Sum_probs=17.2

Q ss_pred             eeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          34 YVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        34 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      |.|..  ||......+-|..|+++|+++
T Consensus         2 YvC~~--Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEE--CGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTT--TCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccc--cCcccCCHHHHHHHHHHhcCC
Confidence            56655  666666666666666666654

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=8.6e-06  Score=34.71  Aligned_cols=25  Identities=24%  Similarity=0.465  Sum_probs=21.1

Q ss_pred             CCeecccccccccccCHHHHHHHHHHh
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      |||.|.  .|.....+.++|+.|++..
T Consensus         1 kpy~cq--yc~yrsadssnlkthiktk   25 (30)
T d1klra_           1 KTYQCQ--YCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCS--SSSCCCSCSHHHHHHHHHH
T ss_pred             CCcccc--ccccccccchhhhhhhhcc
Confidence            688999  8998888888999998853

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.79  E-value=7.1e-06  Score=35.70  Aligned_cols=26  Identities=27%  Similarity=0.577  Sum_probs=18.8

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      ||.|.+|++.|.+.+.|.+|.+.-|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~   26 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHS   26 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhc
Confidence            57777777777777777777665443

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1.3e-05  Score=36.83  Aligned_cols=29  Identities=24%  Similarity=0.394  Sum_probs=26.6

Q ss_pred             CCCeecccccccccccCHHHHHHHHHHhc
Q psy6598           1 MKPFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         1 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      +|||.|.-+.|+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            69999977799999999999999998885

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.74  E-value=2.1e-05  Score=33.29  Aligned_cols=27  Identities=26%  Similarity=0.449  Sum_probs=14.9

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSG   30 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~   30 (154)
                      ..|.|.  .|..+|...-.|+.||-.|+|
T Consensus         3 qvftcs--~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCS--VCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECS--SSCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeH--HHHHHHHHHHhheeeeecccC
Confidence            345555  555555555555555555554

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.73  E-value=1e-05  Score=32.88  Aligned_cols=23  Identities=26%  Similarity=0.463  Sum_probs=11.8

Q ss_pred             eecccccccccccCHHHHHHHHHHh
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      |+|.  .|.++|..++.|.+|++.|
T Consensus         1 ykcg--lcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCG--LCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCS--SSCCBCSSHHHHHHHGGGT
T ss_pred             Cccc--chHHHHHHHHHHHHHHHhh
Confidence            3455  5555555555555555544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.72  E-value=1e-05  Score=36.44  Aligned_cols=29  Identities=24%  Similarity=0.462  Sum_probs=23.2

Q ss_pred             ceeecccccCc---ccCChhhHHHHhhhhcCC
Q psy6598          33 PYVCQVRDCQK---RFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        33 ~~~C~~~~C~~---~f~~~~~l~~H~~~h~~~   61 (154)
                      .|.|.|.+|.+   .|.....|..|+++|+|+
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            47788888875   488888889999888875

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.71  E-value=1.2e-05  Score=32.64  Aligned_cols=23  Identities=43%  Similarity=0.925  Sum_probs=12.7

Q ss_pred             eeecccccCcccCChhhHHHHhhhh
Q psy6598          34 YVCQVRDCQKRFTEYSSLYKHTLVH   58 (154)
Q Consensus        34 ~~C~~~~C~~~f~~~~~l~~H~~~h   58 (154)
                      |+|..  |.+.|..++.|.+|++.|
T Consensus         1 ykcgl--cersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGL--CERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSS--SCCBCSSHHHHHHHGGGT
T ss_pred             Ccccc--hHHHHHHHHHHHHHHHhh
Confidence            34555  555555555555555554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.68  E-value=2.6e-05  Score=33.60  Aligned_cols=30  Identities=23%  Similarity=0.450  Sum_probs=19.1

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCC
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGE   31 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   31 (154)
                      |.|.|..+.|+..|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            556666666666666666666666666653

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.61  E-value=2.6e-05  Score=31.69  Aligned_cols=23  Identities=26%  Similarity=0.631  Sum_probs=18.0

Q ss_pred             ceeCCCCcccccCchhHHHHHHh
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      ||+|..|...|..+..|..||..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            67888888888888888888754

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2.9e-05  Score=32.88  Aligned_cols=23  Identities=30%  Similarity=0.654  Sum_probs=18.0

Q ss_pred             CeecccccccccccCHHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      ||.|.  .|...|..+.+|..||+.
T Consensus         1 py~C~--~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCT--YCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECS--SSSCEESSHHHHHHHHHS
T ss_pred             Ccccc--eeeeeEeeccchhHhhhh
Confidence            67788  888888888888888774

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=4.1e-05  Score=32.55  Aligned_cols=27  Identities=26%  Similarity=0.520  Sum_probs=18.9

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      +||.|..|.....-.++|..|+++-|+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            467777777777777777777776554

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=5.2e-05  Score=32.03  Aligned_cols=27  Identities=30%  Similarity=0.657  Sum_probs=17.0

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      .-|.|.+  |...|.++-.|..|+-+|+|
T Consensus         3 qvftcs~--cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSV--CQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHH--HHHHHHHHHhheeeeecccC
Confidence            3466666  66666666666666666655

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.52  E-value=4e-05  Score=33.01  Aligned_cols=30  Identities=27%  Similarity=0.539  Sum_probs=26.8

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcCC
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDI   61 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   61 (154)
                      +.|.|.+++|+..|.....|..|+-.|+|+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            568999999999999999999999888875

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.45  E-value=4.5e-05  Score=33.10  Aligned_cols=22  Identities=36%  Similarity=0.874  Sum_probs=14.6

Q ss_pred             ceeecccccCcccCChhhHHHHhh
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTL   56 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~   56 (154)
                      ||.|.+  |++.|.+++.|.+|..
T Consensus         1 Pf~C~~--C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGL--CNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTT--TCCEESSHHHHHHHHT
T ss_pred             Cccccc--ccchhhHHHHHHHHHH
Confidence            566666  7777777766666654

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.44  E-value=4.8e-05  Score=31.62  Aligned_cols=23  Identities=30%  Similarity=0.657  Sum_probs=17.7

Q ss_pred             ceeCCCCcccccCchhHHHHHHh
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      ||+|..||+.|-++.+|..|..+
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            57788888888888888777654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.40  E-value=6.3e-05  Score=35.00  Aligned_cols=26  Identities=42%  Similarity=0.856  Sum_probs=22.8

Q ss_pred             cCCCceeecccccCcccCChhhHHHHhh
Q psy6598          29 SGEKPYVCQVRDCQKRFTEYSSLYKHTL   56 (154)
Q Consensus        29 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~   56 (154)
                      +|-+||.|..  |++.|.-++.+.+|..
T Consensus         1 TGiKPYeC~~--C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNI--CAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSS--SCCEESCHHHHHHHHH
T ss_pred             CCCCceeccc--hhhhhhhHHHHHHhhh
Confidence            4778999988  9999999999999964

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=97.26  E-value=0.00013  Score=29.60  Aligned_cols=24  Identities=21%  Similarity=0.498  Sum_probs=19.1

Q ss_pred             eeCCCCcccccCchhHHHHHHhhc
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      |.|+.|-+.|.+++++..|.++-|
T Consensus         2 ypcp~cfkeftrkdnm~ahvkiih   25 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKIIH   25 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHT
T ss_pred             cCCchhhHHhccccCceEEEEEec
Confidence            678888888888888888877644

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.22  E-value=0.00014  Score=30.10  Aligned_cols=25  Identities=36%  Similarity=0.801  Sum_probs=13.6

Q ss_pred             eeecccccCcccCChhhHHHHhhhh
Q psy6598          34 YVCQVRDCQKRFTEYSSLYKHTLVH   58 (154)
Q Consensus        34 ~~C~~~~C~~~f~~~~~l~~H~~~h   58 (154)
                      |.|.+++|++.|.....|..|+-+|
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeecc
Confidence            4455555555555555555555444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=0.00031  Score=29.71  Aligned_cols=24  Identities=25%  Similarity=0.497  Sum_probs=16.2

Q ss_pred             CCeecccccccccccCHHHHHHHHHH
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      +||+|.  .|..-....++|..|++.
T Consensus         1 rPFkC~--~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           1 RPFKCN--YCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             CSEECS--SSSCEESSHHHHHHHHHH
T ss_pred             CCcccc--eecccccCcchHHHHHHH
Confidence            467777  777666667777777664

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.95  E-value=0.00036  Score=28.18  Aligned_cols=22  Identities=23%  Similarity=0.534  Sum_probs=17.2

Q ss_pred             CeecccccccccccCHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      ||+|.  .|...|..+..|+.|+-
T Consensus         2 pykcs--scsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCS--SCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECS--SSCCEESSHHHHHHHHH
T ss_pred             CCccc--HHHHHHHHHHHHHHHHH
Confidence            67888  88888888888888764

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.0005  Score=28.63  Aligned_cols=25  Identities=24%  Similarity=0.553  Sum_probs=15.5

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhc
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      |-+|+.|.++.+.+..|+.|.|.|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4456666666666666666666653

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.88  E-value=0.00036  Score=28.89  Aligned_cols=22  Identities=23%  Similarity=0.356  Sum_probs=14.7

Q ss_pred             CeecccccccccccCHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      ||+|.  .||+.|..+.+|..|..
T Consensus         1 pf~c~--kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECP--KCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCT--TTCCBCSSHHHHHHHHH
T ss_pred             CCccc--cchhhhhhHhHHHHHHH
Confidence            56677  77777777776666644

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.71  E-value=0.00065  Score=30.03  Aligned_cols=26  Identities=19%  Similarity=0.611  Sum_probs=18.7

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhcC
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNHR   88 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~~   88 (154)
                      .|.|..|||.|.+...+.+|.....+
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47777788888877777777666544

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.00072  Score=28.40  Aligned_cols=22  Identities=23%  Similarity=0.513  Sum_probs=17.1

Q ss_pred             eecccccCcccCChhhHHHHhh
Q psy6598          35 VCQVRDCQKRFTEYSSLYKHTL   56 (154)
Q Consensus        35 ~C~~~~C~~~f~~~~~l~~H~~   56 (154)
                      .|++++||+.|.++..|.-|.+
T Consensus         2 ~cdf~gc~kifsnrqylnhh~k   23 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHH
Confidence            4777788888888888877765

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.42  E-value=0.0016  Score=26.80  Aligned_cols=26  Identities=19%  Similarity=0.305  Sum_probs=23.2

Q ss_pred             eecccccccccccCHHHHHHHHHHhc
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      |.|....|++.|..-..|+.|+-.|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            77888899999999999999988775

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.001  Score=31.97  Aligned_cols=26  Identities=15%  Similarity=0.371  Sum_probs=22.2

Q ss_pred             CceeCCCCcccccCchhHHHHHHhhc
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      ..|.|..|+|.|.-...|+.|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35889999999999999999988763

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.0014  Score=31.46  Aligned_cols=23  Identities=22%  Similarity=0.262  Sum_probs=17.5

Q ss_pred             eecccccccccccCHHHHHHHHHHh
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      |.|.  .|||.|.....|+.|...|
T Consensus         7 ~pCG--~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           7 LPCG--LCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCT--TTCCCCSCHHHHHHHHHHH
T ss_pred             eecc--ccccccCCHHHHhHhHHhc
Confidence            6677  7888887777777776666

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0023  Score=26.63  Aligned_cols=25  Identities=16%  Similarity=0.312  Sum_probs=19.1

Q ss_pred             ecccccccccccCHHHHHHHHHHhc
Q psy6598           5 FYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         5 ~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      .|+...|++.|.+.+.++.|+.+|.
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            4666678888888888888887763

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0032  Score=27.73  Aligned_cols=26  Identities=27%  Similarity=0.595  Sum_probs=19.2

Q ss_pred             ceeecccccCcccCChhhHHHHhhhhcC
Q psy6598          33 PYVCQVRDCQKRFTEYSSLYKHTLVHSD   60 (154)
Q Consensus        33 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~   60 (154)
                      .|.|..  ||+.|+++..+.+|.....|
T Consensus         4 afvcsk--cgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSK--CGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSS--SCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecc--cccchhcchHHHHHhhhcCC
Confidence            477876  88888888888888765544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.0039  Score=25.76  Aligned_cols=24  Identities=29%  Similarity=0.628  Sum_probs=17.1

Q ss_pred             eeCCCCcccccCchhHHHHHHhhc
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      |.|+.|+....+++.|..|++.-|
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            677777777777777777776543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.91  E-value=0.0053  Score=25.43  Aligned_cols=25  Identities=32%  Similarity=0.454  Sum_probs=15.0

Q ss_pred             CeecccccccccccCHHHHHHHHHHhc
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      |-+|.  .|..+..++..|+.|.++|.
T Consensus         2 pekc~--ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCS--ECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECS--SSSCEESSHHHHHHHHGGGC
T ss_pred             CccCc--ccccccCcHHHHHHhhcccc
Confidence            34566  66666666666666666653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.83  E-value=0.0045  Score=25.57  Aligned_cols=23  Identities=22%  Similarity=0.398  Sum_probs=18.6

Q ss_pred             CeecccccccccccCHHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      .|+|+  .|+.....++.|..|++.
T Consensus         2 k~qcp--hc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCP--HCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECS--SSSCEESSHHHHHHHHHH
T ss_pred             CccCC--cchhheeehhhhhHHhhh
Confidence            47888  888888888888888774

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.83  E-value=0.0047  Score=24.87  Aligned_cols=22  Identities=23%  Similarity=0.357  Sum_probs=16.2

Q ss_pred             eecccccccccccCHHHHHHHHHH
Q psy6598           4 FFYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      |.|+  .|-+-|..+.++..|.++
T Consensus         2 ypcp--~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCP--FCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECT--TTCCEESCHHHHHHHHHH
T ss_pred             cCCc--hhhHHhccccCceEEEEE
Confidence            6777  777777777777777663

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.81  E-value=0.0065  Score=25.48  Aligned_cols=24  Identities=21%  Similarity=0.307  Sum_probs=20.3

Q ss_pred             CeecccccccccccCHHHHHHHHHHh
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      .|.|.  .||+...+...++.|+..-
T Consensus         2 ~ftc~--hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           2 MFTCH--HCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCCS--SSCCCCSSHHHHHHHHHHH
T ss_pred             ceech--hHHHHHhhccCceEEEeec
Confidence            47899  9999999999999997753

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.68  E-value=0.009  Score=24.92  Aligned_cols=23  Identities=13%  Similarity=0.064  Sum_probs=20.2

Q ss_pred             ecccccccccccCHHHHHHHHHH
Q psy6598           5 FYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         5 ~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      .|+.+.||+.|.....|.-|.+.
T Consensus         2 ~cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCCchhhhccHHHHHhHHHH
Confidence            58888999999999999999774

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.42  E-value=0.0041  Score=27.12  Aligned_cols=24  Identities=25%  Similarity=0.539  Sum_probs=19.6

Q ss_pred             CceeCCCCcccccCchhHHHHHHh
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      ..|.|.-||-.|++.+.|..|+..
T Consensus         7 arf~c~pcgirfss~stleahqty   30 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTTT
T ss_pred             cceeccccceeecChhHHHhhhhe
Confidence            358898899999999999888654

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.22  E-value=0.02  Score=23.95  Aligned_cols=25  Identities=28%  Similarity=0.492  Sum_probs=19.2

Q ss_pred             CCeecccccccccccCHHHHHHHHH
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      |-|+|+.+.|+-.|..+.+++.|..
T Consensus         1 knf~cdsd~cdl~fttkanmkkhfn   25 (31)
T d1tf3a3           1 KNFTCDSDGCDLRFTTKANMKKHFN   25 (31)
T ss_dssp             CCEECSSSSCCCEESSHHHHHHHHH
T ss_pred             CCccccCCCcceEEeehHHHHHHHh
Confidence            3577887788888888888888754

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.011  Score=24.55  Aligned_cols=23  Identities=35%  Similarity=0.717  Sum_probs=11.0

Q ss_pred             ecccccCcccCChhhHHHHhhhh
Q psy6598          36 CQVRDCQKRFTEYSSLYKHTLVH   58 (154)
Q Consensus        36 C~~~~C~~~f~~~~~l~~H~~~h   58 (154)
                      |...+|.+.|...+.++.|+-+|
T Consensus         4 CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGG
T ss_pred             CCcccHHHHhhchHHHHHHhhcc
Confidence            43344555555555555554433

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.93  E-value=0.014  Score=24.40  Aligned_cols=24  Identities=33%  Similarity=0.775  Sum_probs=17.6

Q ss_pred             eeCCCCcccccCchhHHHHHHhhc
Q psy6598          64 FICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      |.|..|||+..+...++.|...-|
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadh   26 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANH   26 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHT
T ss_pred             eechhHHHHHhhccCceEEEeecc
Confidence            677778888887777777765544

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=94.63  E-value=0.01  Score=25.83  Aligned_cols=22  Identities=27%  Similarity=0.635  Sum_probs=17.2

Q ss_pred             CeecccccccccccCHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      .|.|.  -||..|.+.+.|..|+.
T Consensus         8 rf~c~--pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCL--PCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCT--TTCCBCSCHHHHHHHTT
T ss_pred             ceecc--ccceeecChhHHHhhhh
Confidence            46788  88888888888888754

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.35  E-value=0.03  Score=23.34  Aligned_cols=25  Identities=24%  Similarity=0.558  Sum_probs=14.6

Q ss_pred             ceeCCC--CcccccCchhHHHHHHhhc
Q psy6598          63 PFICDR--CPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        63 ~~~C~~--C~~~f~~~~~l~~H~~~~~   87 (154)
                      .|.|..  |...|..+.++.+|..+.|
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             CccccCCCcceEEeehHHHHHHHhhhc
Confidence            355543  6666666666666655544

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.48  E-value=0.059  Score=25.54  Aligned_cols=28  Identities=29%  Similarity=0.412  Sum_probs=21.6

Q ss_pred             CCCceeCCCCcccccCchhHHHHHHhhc
Q psy6598          60 DIRPFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        60 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      .+.|-.|++|+....+..+|.+|+..-|
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHh
Confidence            4567888888888888888888877644

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=93.03  E-value=0.049  Score=23.89  Aligned_cols=25  Identities=28%  Similarity=0.672  Sum_probs=13.9

Q ss_pred             ceeCCCCcccccCchhHHHHHHhhc
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      .|.|.+|.+.|..-+++-+|--+-|
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             EEEeehhhHHHHHHHHHHHHHHhhc
Confidence            4556666666666565555544433

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.86  E-value=0.047  Score=23.60  Aligned_cols=23  Identities=17%  Similarity=0.109  Sum_probs=18.2

Q ss_pred             ecccccccccccCHHHHHHHHHH
Q psy6598           5 FYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         5 ~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      .|.|..|+.-|.+...|..|+..
T Consensus         3 nChW~~C~~eFdtQd~LV~Hinn   25 (32)
T d2glia1           3 DCRWDGCSQEFDSQEQLVHHINS   25 (32)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHH
T ss_pred             cccccccccccCCHHHHHHHccc
Confidence            46777888888888888888764

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.83  E-value=0.063  Score=23.64  Aligned_cols=24  Identities=21%  Similarity=0.553  Sum_probs=14.6

Q ss_pred             CceeCCCCcccccCchhHHHHHHh
Q psy6598          62 RPFICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      +.|.|..|.|-..+...|.+|+..
T Consensus         6 kLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           6 KLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeeehhhhhhhCCHHHHHHHHHh
Confidence            446666666666666666666543

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.81  E-value=0.015  Score=30.38  Aligned_cols=23  Identities=22%  Similarity=0.434  Sum_probs=18.1

Q ss_pred             ceeCCCCcccccCchhHHHHHHh
Q psy6598          63 PFICDRCPRSYRQLCTLNVHKKT   85 (154)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~H~~~   85 (154)
                      .|-|..|++.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            37788888888888888888664

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.62  E-value=0.02  Score=29.96  Aligned_cols=21  Identities=33%  Similarity=0.553  Sum_probs=13.2

Q ss_pred             eecccccccccccCHHHHHHHHH
Q psy6598           4 FFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         4 ~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      |-|.  .|++.|.+...|..|++
T Consensus        16 fYCv--~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          16 HRCL--ACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             SEET--TTTEECSSHHHHHHHTT
T ss_pred             Eecc--cccCccCCHHHHHHHHc
Confidence            5566  66666666666666654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.27  E-value=0.092  Score=22.97  Aligned_cols=23  Identities=13%  Similarity=0.281  Sum_probs=19.1

Q ss_pred             CeecccccccccccCHHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRI   27 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~   27 (154)
                      .|.|.  .|.++|...+++-+|.-.
T Consensus         8 ~yRC~--~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           8 TYRCK--VCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             EEECT--TTCCEESSHHHHHHHHHH
T ss_pred             EEEee--hhhHHHHHHHHHHHHHHh
Confidence            58888  999999988888888654

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=91.58  E-value=0.15  Score=24.12  Aligned_cols=24  Identities=25%  Similarity=0.562  Sum_probs=14.1

Q ss_pred             CCceeecccccCcccCChhhHHHHhh
Q psy6598          31 EKPYVCQVRDCQKRFTEYSSLYKHTL   56 (154)
Q Consensus        31 ~~~~~C~~~~C~~~f~~~~~l~~H~~   56 (154)
                      +.|-.|.+  |+........|.+|+.
T Consensus        22 ~qpatcpi--c~avirqsrnlrrhle   45 (54)
T d1yuja_          22 EQPATCPI--CYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             SCCEECTT--TCCEESSHHHHHHHHH
T ss_pred             cCCCCCch--HHHHHHHHHHHHHHHH
Confidence            44556655  6666666666666654

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.47  E-value=0.11  Score=26.43  Aligned_cols=25  Identities=20%  Similarity=0.489  Sum_probs=18.1

Q ss_pred             CeecccccccccccCHHHHHHHHHHhc
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMRIHS   29 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~~h~   29 (154)
                      -|+|.  +|.-.|.+...|..|+..|.
T Consensus        18 ~yQC~--HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          18 TYQCK--HCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHHH
T ss_pred             eeeec--hhHHHHhhHHHHHHHHHhcc
Confidence            36777  77777777777777777664

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.44  E-value=0.084  Score=23.83  Aligned_cols=26  Identities=27%  Similarity=0.466  Sum_probs=18.1

Q ss_pred             CCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcc
Q psy6598          31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPR   71 (154)
Q Consensus        31 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   71 (154)
                      ++-|.|.+  ||..             |.|+.|-+|++||.
T Consensus         3 ~~~~vC~v--CGyi-------------~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLCPI--CGYI-------------HKGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEECSS--SCCE-------------EESSCCSBCTTTCC
T ss_pred             CCEEECCC--CCCE-------------eeCCCCCcCCCCCC
Confidence            45688877  8865             34556778888875

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.92  E-value=0.25  Score=23.89  Aligned_cols=27  Identities=30%  Similarity=0.485  Sum_probs=19.7

Q ss_pred             CCCceeecccccCcccCChhhHHHHhh
Q psy6598          30 GEKPYVCQVRDCQKRFTEYSSLYKHTL   56 (154)
Q Consensus        30 ~~~~~~C~~~~C~~~f~~~~~l~~H~~   56 (154)
                      .-+||.|-..+|...|+....|.-|.+
T Consensus        17 pyrpyrcvhqgc~aaftiq~nlilhy~   43 (61)
T d1x3ca1          17 PYRPYRCVHQGCFAAFTIQQNLILHYQ   43 (61)
T ss_dssp             SSCSCBCCSTTCCCBCSSHHHHHHHHH
T ss_pred             CCCceeeeccchhhhhhhhhhHHHHHH
Confidence            346777777777777777777777766

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=89.71  E-value=0.094  Score=23.82  Aligned_cols=25  Identities=32%  Similarity=0.741  Sum_probs=16.7

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcc
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPR   71 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   71 (154)
                      +.|.|.+  ||..             +.++.|-.|++|+.
T Consensus         4 ~~~~C~v--CG~i-------------~~g~~P~~CPvCg~   28 (37)
T d1nnqa2           4 KVYICPI--CGYT-------------AVDEAPEYCPVCGA   28 (37)
T ss_dssp             CEEECTT--TCCE-------------EESCCCSBCTTTCC
T ss_pred             cEEECCC--CCCE-------------ecCCCCCcCCCCCC
Confidence            4577877  8865             33456677888874

>d1x3ca1 g.37.1.1 (A:8-68) Zinc finger protein 292, ZNF292 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 292, ZNF292
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.54  E-value=0.22  Score=24.07  Aligned_cols=30  Identities=23%  Similarity=0.527  Sum_probs=18.1

Q ss_pred             CCceeCCC--CcccccCchhHHHHHHhhcCcC
Q psy6598          61 IRPFICDR--CPRSYRQLCTLNVHKKTNHRES   90 (154)
Q Consensus        61 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~   90 (154)
                      -+||.|-.  |-..|.-..+|.-|-+..|...
T Consensus        18 yrpyrcvhqgc~aaftiq~nlilhy~avh~s~   49 (61)
T d1x3ca1          18 YRPYRCVHQGCFAAFTIQQNLILHYQAVHKSD   49 (61)
T ss_dssp             SCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSC
T ss_pred             CCceeeeccchhhhhhhhhhHHHHHHHHhhhc
Confidence            35666643  6666666666666666655443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.10  E-value=0.08  Score=26.98  Aligned_cols=29  Identities=17%  Similarity=0.442  Sum_probs=22.0

Q ss_pred             CCceeCCCCcccccCchhHHHHHHhhcCc
Q psy6598          61 IRPFICDRCPRSYRQLCTLNVHKKTNHRE   89 (154)
Q Consensus        61 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   89 (154)
                      ...|+|..|...|.+...|..|+..|..+
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hnee   44 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNEE   44 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccHH
Confidence            34588888888888888888888777544

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.90  E-value=0.085  Score=26.97  Aligned_cols=36  Identities=22%  Similarity=0.522  Sum_probs=19.1

Q ss_pred             CCceeecccccCcccCChhhHHHHhhhhcCCCceeCCCCcc
Q psy6598          31 EKPYVCQVRDCQKRFTEYSSLYKHTLVHSDIRPFICDRCPR   71 (154)
Q Consensus        31 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   71 (154)
                      ...|.|..  |++.|.....++-   .-...-.|.|..|+-
T Consensus        12 ~~~y~Cp~--C~~~ys~Lda~~L---~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          12 RASFKCPV--CSSTFTDLEANQL---FDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SSEEECSS--SCCEEEHHHHHHH---EETTTTEEBCSSSCC
T ss_pred             CCceECCC--CCCCcchhhHHHh---cCcCCCeEEecCCCC
Confidence            34577754  7777666555432   111223377777654

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.47  E-value=0.13  Score=26.22  Aligned_cols=37  Identities=14%  Similarity=0.331  Sum_probs=26.0

Q ss_pred             CCeecccccccccccCHHHHHHHHHHhcCCCceeecccccCccc
Q psy6598           2 KPFFYFPWDCKISFASATNYKNHMRIHSGEKPYVCQVRDCQKRF   45 (154)
Q Consensus         2 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   45 (154)
                      ..|+|+  .|+++|.....++.   .-...-.|.|.+  |+...
T Consensus        13 ~~y~Cp--~C~~~ys~Lda~~L---~d~~~~~F~C~~--C~~el   49 (62)
T d1vd4a_          13 ASFKCP--VCSSTFTDLEANQL---FDPMTGTFRCTF--CHTEV   49 (62)
T ss_dssp             SEEECS--SSCCEEEHHHHHHH---EETTTTEEBCSS--SCCBC
T ss_pred             CceECC--CCCCCcchhhHHHh---cCcCCCeEEecC--CCCEE
Confidence            359999  99999976665543   323345699988  98653

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.82  E-value=0.42  Score=20.88  Aligned_cols=22  Identities=23%  Similarity=0.289  Sum_probs=11.6

Q ss_pred             CeecccccccccccCHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      .|.|+  .|-+-..+...|.+|+.
T Consensus         7 LyiCE--fCLKYmks~~~l~RH~~   28 (33)
T d1m36a_           7 LYLCE--FCLKYMKSRTILQQHMK   28 (33)
T ss_dssp             CEECS--SSCCEESCHHHHHHHHH
T ss_pred             eeeeh--hhhhhhCCHHHHHHHHH
Confidence            35555  55555555555555543

>d2czra1 c.52.4.1 (A:1-218) TBP-interacting protein {Thermococcus kodakaraensis [TaxId: 311400]}

class: Alpha and beta proteins (a/b)
fold: Restriction endonuclease-like
superfamily: TBP-interacting protein-like
family: TBP-interacting protein-like
domain: TBP-interacting protein
species: Thermococcus kodakaraensis [TaxId: 311400]

Probab=86.76  E-value=0.15  Score=31.43  Aligned_cols=38  Identities=18%  Similarity=0.472  Sum_probs=26.8

Q ss_pred             hhHHHHhhhh--cCC-----CceeCCCCcccccCchhHHHHHHhhc
Q psy6598          49 SSLYKHTLVH--SDI-----RPFICDRCPRSYRQLCTLNVHKKTNH   87 (154)
Q Consensus        49 ~~l~~H~~~h--~~~-----~~~~C~~C~~~f~~~~~l~~H~~~~~   87 (154)
                      ..|..|++.-  .|.     .-|+|..||+ |.--.+|.+||+.|.
T Consensus       125 grlieHiK~~m~~GqDyvFWQFYKCe~CgK-YvDie~~~~H~k~HG  169 (218)
T d2czra1         125 AALVNHIKNNALAGQDYIFWQFYKCEECGK-YVDIENLEAHLREHG  169 (218)
T ss_dssp             HHHHHHHHTTCCBTTTEEEEEEEECTTTCC-EEEGGGHHHHHHTTT
T ss_pred             HHHHHHHHhccccCcceEEEEEeehhhcCc-eecHHHHHHHHHHcC
Confidence            3466666532  121     3489999998 567789999999964

>d1wjpa3 g.37.1.1 (A:67-107) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.38  E-value=0.25  Score=21.77  Aligned_cols=22  Identities=18%  Similarity=0.309  Sum_probs=14.0

Q ss_pred             CeecccccccccccCHHHHHHHHH
Q psy6598           3 PFFYFPWDCKISFASATNYKNHMR   26 (154)
Q Consensus         3 ~~~C~~~~C~~~f~~~~~l~~H~~   26 (154)
                      ...|-  .|-++|++.-.+.+|+-
T Consensus         3 kltcl--ecmrtfkssfsiwrhqv   24 (41)
T d1wjpa3           3 KLTCL--ECMRTFKSSFSIWRHQV   24 (41)
T ss_dssp             GGEEG--GGTEECSSHHHHHHHHH
T ss_pred             cccHH--HHHHHHHHHHHHHHhhh
Confidence            45566  66666666666666654

>d1wira_ g.37.1.5 (A:) Protein arginine N-methyltransferase 3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: variant C2H2 finger
domain: Protein arginine N-methyltransferase 3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=85.31  E-value=0.37  Score=27.99  Aligned_cols=26  Identities=15%  Similarity=0.448  Sum_probs=16.8

Q ss_pred             CceeecccccCcccCChhhHHHHhhhhc
Q psy6598          32 KPYVCQVRDCQKRFTEYSSLYKHTLVHS   59 (154)
Q Consensus        32 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~   59 (154)
                      .+-.|-+  |.+.|.....+..|++..+
T Consensus        14 ~~~~CLF--Cd~~f~s~~~~l~H~k~~H   39 (121)
T d1wira_          14 QHTPCLF--CDRLFASAEETFSHCKLEH   39 (121)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHSS
T ss_pred             ccceecc--cCCccCCHHHHHHHHHHhh
Confidence            3456666  7777777777777776543

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=82.70  E-value=0.84  Score=20.04  Aligned_cols=22  Identities=27%  Similarity=0.543  Sum_probs=17.2

Q ss_pred             ecccccccccccCHHHHHHHHHHh
Q psy6598           5 FYFPWDCKISFASATNYKNHMRIH   28 (154)
Q Consensus         5 ~C~~~~C~~~f~~~~~l~~H~~~h   28 (154)
                      -|.  .|+..|.....+..|.+.-
T Consensus        10 YC~--~CDI~Fn~~~T~~aHKk~Y   31 (36)
T d1fu9a_          10 YCS--TCDISFNYVKTYLAHKQFY   31 (36)
T ss_dssp             EET--TTTEECSSHHHHHHHHHHT
T ss_pred             HHh--hCCceehhHHHHHHHHHhc
Confidence            377  8888898888888886643