Psyllid ID: psy6758

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-
Protein Sequence
MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKVRKNIIKH
Secondary Structure (PSIPRED)
cccccEEEEEEEccccccccccEEEEccccEEEEEEcccccccEEEcccccEEEEEcccEEEEEcccccccccccccccccccccccccccHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccEEEEEEEEEEEEEcccccEEEEccccEEEEEEEcccccEEEEccccccEEEcHHHEEEEcccccccccccccccccHHHccccHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MELQDVTLKVLYDfdystkdgkyvrIQEGEKLFLIKKTNKDWWQVIRssgkpfyvpaSYVEVYKKLsngnrnnveninptmektrsysegnDKVRKNIIKH
Flexible Loop (DISEMBL)
melqdvtlkvlydfdystkdgkyvriQEGEKLFLIKKTNKDWWQVIRssgkpfyvpASYVEVYKklsngnrnnveninptmektrsysegndkvrkniikh
Low Complexity Region (SEG)
MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKVRKNIIKH
Disordered region (IsUnstruct)
*****VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL***********************************
Disordered Region (DISOPRED)
****DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV*****************************************
Disordered Region (DISEMBL)
MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKVRKNIIKH
Disordered Region (DISPRO)
**LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS**********************************
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
oooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
ooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKVRKNIIKH
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	101	2.2.26 [Sep-21-2011]
Q8IWW6	846	Rho GTPase-activating pro	yes	N/A	0.584	0.069	0.532	1e-08
Q8C0D4	838	Rho GTPase-activating pro	no	N/A	0.564	0.068	0.533	1e-08
Q9BE31	847	Rho GTPase-activating pro	N/A	N/A	0.564	0.067	0.533	2e-08
Q9BRR9	750	Rho GTPase-activating pro	no	N/A	0.524	0.070	0.421	3e-08
Q6TLK4	869	Rho GTPase-activating pro	no	N/A	0.554	0.064	0.421	3e-08
A2AB59	869	Rho GTPase-activating pro	no	N/A	0.554	0.064	0.421	3e-08
Q6ZUM4	889	Rho GTPase-activating pro	no	N/A	0.554	0.062	0.421	5e-08
Q66K37	72	Putative Rho GTPase-activ	no	N/A	0.554	0.777	0.421	6e-07
Q6CHN0	1136	Actin cytoskeleton-regula	yes	N/A	0.514	0.045	0.472	7e-07
Q4P3H6	1207	Actin cytoskeleton-regula	N/A	N/A	0.485	0.040	0.411	9e-05

>sp|Q8IWW6|RHG12_HUMAN Rho GTPase-activating protein 12 OS=Homo sapiens GN=ARHGAP12 PE=1 SV=1

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 33/62 (53%), Positives = 43/62 (69%), Gaps = 3/62 (4%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYV-EVY 63
          V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct: 15 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVT 73

Query: 64 KK 65
          +K
Sbjct: 74 RK 75

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.
Homo sapiens (taxid: 9606)

>sp|Q8C0D4|RHG12_MOUSE Rho GTPase-activating protein 12 OS=Mus musculus GN=Arhgap12 PE=1 SV=2

 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 3/60 (5%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYV-EVYKK 65
          ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV +K
Sbjct: 15 IEVEYDYEYDAKDRKIV-IRQGERYLLVKKTNDDWWQVRPDENSKAFYVPAQYVKEVTRK 73

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.

Mus musculus (taxid: 10090)

>sp|Q9BE31|RHG12_MACFA Rho GTPase-activating protein 12 OS=Macaca fascicularis GN=ARHGAP12 PE=2 SV=1

 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 32/60 (53%), Positives = 42/60 (70%), Gaps = 3/60 (5%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYV-EVYKK 65
          ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV +K
Sbjct: 17 IEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVTRK 75

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state.

Macaca fascicularis (taxid: 9541)

>sp|Q9BRR9|RHG09_HUMAN Rho GTPase-activating protein 9 OS=Homo sapiens GN=ARHGAP9 PE=1 SV=2

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 4/57 (7%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          L  LY F Y+  DG+ V + EG++  L++KTN DWW   R    S+ +P +VPA+Y+
Sbjct: 27 LCALYAFTYTGADGQQVSLAEGDRFLLLRKTNSDWWLARRLEAPSTSRPIFVPAAYM 83

GTPase activator for the Rho-type GTPases by converting them to an inactive GDP-bound state. Has a substantial GAP activity toward CDC42 and RAC1 and less toward RHOA. Has a role in regulating adhesion of hematopoietic cells to the extracellular matrix.

Homo sapiens (taxid: 9606)

>sp|Q6TLK4|RHG27_RAT Rho GTPase-activating protein 27 OS=Rattus norvegicus GN=Arhgap27 PE=1 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 5  DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV 60
          DV + V + F+Y+ KDG+ + IQ  E+  L++++ + WW V R   G+PFY+PA YV
Sbjct: 8  DVYVLVEHPFEYTGKDGRLIAIQPNERCRLLRRSTEHWWHVRREPGGRPFYLPAQYV 64

Rho GTPase-activating protein which may be involved in clathrin-mediated endocytosis. GTPase activators for the Rho-type GTPases act by converting them to an inactive GDP-bound state. Has activity toward CDC42 and RAC1.

Rattus norvegicus (taxid: 10116)

>sp|A2AB59|RHG27_MOUSE Rho GTPase-activating protein 27 OS=Mus musculus GN=Arhgap27 PE=1 SV=1

 Score = 57.4 bits (137), Expect = 3e-08,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 5  DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV 60
          DV + V + F+Y+ KDG+ + IQ  E+  L++++ + WW V R   G+PFY+PA YV
Sbjct: 8  DVYVLVEHPFEYTGKDGRRIAIQPNERYRLLRRSTEHWWHVRREPGGRPFYLPAQYV 64

Rho GTPase-activating protein which may be involved in clathrin-mediated endocytosis. GTPase activators for the Rho-type GTPases act by converting them to an inactive GDP-bound state. Has activity toward CDC42 and RAC1.

Mus musculus (taxid: 10090)

>sp|Q6ZUM4|RHG27_HUMAN Rho GTPase-activating protein 27 OS=Homo sapiens GN=ARHGAP27 PE=1 SV=3

 Score = 56.2 bits (134), Expect = 5e-08,   Method: Composition-based stats.
 Identities = 24/57 (42%), Positives = 38/57 (66%), Gaps = 1/57 (1%)

Query: 5  DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV 60
          DV + V + F+Y+ KDG+ V I+  E+  L++++ + WW V R   G+PFY+PA YV
Sbjct: 8  DVYVLVEHPFEYTGKDGRRVAIRPNERYRLLRRSTEHWWHVRREPGGRPFYLPAQYV 64

Rho GTPase-activating protein which may be involved in clathrin-mediated endocytosis. GTPase activators for the Rho-type GTPases act by converting them to an inactive GDP-bound state. Has activity toward CDC42 and RAC1.

Homo sapiens (taxid: 9606)

>sp|Q66K37|RH27L_HUMAN Putative Rho GTPase-activating protein 27-like protein OS=Homo sapiens PE=5 SV=1

 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 24/57 (42%), Positives = 36/57 (63%), Gaps = 1/57 (1%)

Query: 5  DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV 60
          DV L V + F+Y+ KD + V I   E+ +L++++ + WW V R   G PFY+PA YV
Sbjct: 8  DVYLVVEHPFEYTRKDWRRVAIWPNERYWLLRRSTEHWWHVRREPGGHPFYLPAQYV 64

Homo sapiens (taxid: 9606)

>sp|Q6CHN0|SLA1_YARLI Actin cytoskeleton-regulatory complex protein SLA1 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) GN=SLA1 PE=3 SV=1

 Score = 52.8 bits (125), Expect = 7e-07,   Method: Composition-based stats.
 Identities = 26/55 (47%), Positives = 36/55 (65%), Gaps = 3/55 (5%)

Query: 9   KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEV 62
           KVLY FD   +D   V ++EGE +F+I  T ++DWW V  SSG    VP+SY+E+
Sbjct: 362 KVLYKFDAQGRD--EVSVEEGENVFIIDDTKSRDWWMVKNSSGVAGVVPSSYIEI 414

Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization.

Yarrowia lipolytica (strain CLIB 122 / E 150) (taxid: 284591)

>sp|Q4P3H6|SLA1_USTMA Actin cytoskeleton-regulatory complex protein SLA1 OS=Ustilago maydis (strain 521 / FGSC 9021) GN=SLA1 PE=3 SV=1

 Score = 45.8 bits (107), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 21/51 (41%), Positives = 31/51 (60%), Gaps = 2/51 (3%)

Query: 11  LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           +YDF+    D   + + E E L +++K N DWW+V   +G+   VPASYVE
Sbjct: 375 MYDFEAQGDD--ELTVTENEHLIILEKENDDWWKVRNDAGQEGVVPASYVE 423

Component of the PAN1 actin cytoskeleton-regulatory complex required for the internalization of endosomes during actin-coupled endocytosis. The complex links the site of endocytosis to the cell membrane-associated actin cytoskeleton. Mediates uptake of external molecules and vacuolar degradation of plasma membrane proteins. Plays a role in the proper organization of the cell membrane-associated actin cytoskeleton and promotes its destabilization.

Ustilago maydis (strain 521 / FGSC 9021) (taxid: 237631)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
328723474	940	PREDICTED: rho GTPase-activating protein	0.594	0.063	0.65	8e-18
326534202	938	predicted protein [Hordeum vulgare subsp	0.594	0.063	0.65	9e-18
242014156	709	conserved hypothetical protein [Pediculu	0.693	0.098	0.492	1e-11
47222842	906	unnamed protein product [Tetraodon nigro	0.544	0.060	0.542	3e-10
410920229	896	PREDICTED: rho GTPase-activating protein	0.544	0.061	0.542	3e-10
432858075	887	PREDICTED: rho GTPase-activating protein	0.544	0.062	0.542	8e-10
348528805	865	PREDICTED: rho GTPase-activating protein	0.544	0.063	0.542	1e-09
223647562	894	Rho GTPase-activating protein 15 [Salmo	0.544	0.061	0.525	1e-09
317418795	873	Rho GTPase-activating protein 12 [Dicent	0.544	0.063	0.542	2e-09
449492172	839	PREDICTED: rho GTPase-activating protein	0.732	0.088	0.421	6e-09

>gi|328723474|ref|XP_001944075.2| PREDICTED: rho GTPase-activating protein 12-like [Acyrthosiphon pisum]

 Score = 94.4 bits (233), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 39/60 (65%), Positives = 51/60 (85%)

Query: 1  MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          M++ D  ++VLYDF+Y T++ K V I+EGEKL L+KKTN DWWQVIRSSG+PFYVPA++V
Sbjct: 1  MDISDTKVRVLYDFEYKTRENKCVSIKEGEKLLLLKKTNDDWWQVIRSSGQPFYVPATFV 60

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326534202|dbj|BAJ89451.1| predicted protein [Hordeum vulgare subsp. vulgare]

 Score = 94.4 bits (233), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 39/60 (65%), Positives = 51/60 (85%)

Query: 1  MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          M++ D  ++VLYDF+Y T++ K V I+EGEKL L+KKTN DWWQVIRSSG+PFYVPA++V
Sbjct: 1  MDISDTKVRVLYDFEYKTRENKCVSIKEGEKLLLLKKTNDDWWQVIRSSGQPFYVPATFV 60

Source: Hordeum vulgare subsp. vulgare

Species: Hordeum vulgare

Genus: Hordeum

Family: Poaceae

Order: Poales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|242014156|ref|XP_002427761.1| conserved hypothetical protein [Pediculus humanus corporis] gi|212512215|gb|EEB15023.1| conserved hypothetical protein [Pediculus humanus corporis]

 Score = 73.6 bits (179), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 35/71 (49%), Positives = 50/71 (70%), Gaps = 1/71 (1%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSG-KPFYVPASYVEVYKKL 66
          L VLYDF Y  KD + + +++GEKL L++KTN+DWWQV+R S  K F+VPA YVE+  K 
Sbjct: 14 LVVLYDFRYMWKDNREISVKKGEKLLLLEKTNRDWWQVVRPSERKSFFVPAQYVELLVKW 73

Query: 67 SNGNRNNVENI 77
             N+++ E+ 
Sbjct: 74 KTQNKDDAESF 84

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|47222842|emb|CAF96509.1| unnamed protein product [Tetraodon nigroviridis]

 Score = 69.3 bits (168), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 4/59 (6%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          V L+  YD++Y   DG+ V I+EGE+  L+KKTN DWWQV R    S  KP YVPA+YV
Sbjct: 32 VVLEAQYDYNYRGNDGRQVCIREGERFILLKKTNADWWQVRRIGAASKAKPLYVPATYV 90

Source: Tetraodon nigroviridis

Species: Tetraodon nigroviridis

Genus: Tetraodon

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|410920229|ref|XP_003973586.1| PREDICTED: rho GTPase-activating protein 9-like [Takifugu rubripes]

 Score = 68.9 bits (167), Expect = 3e-10,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 4/59 (6%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          V L+  YD++Y   DG+ V I+EGE+  L+KKTN DWWQV R    S  KP YVPA+YV
Sbjct: 36 VVLEAQYDYNYRANDGRQVCIREGERFILLKKTNADWWQVRRIGAASKAKPLYVPATYV 94

Source: Takifugu rubripes

Species: Takifugu rubripes

Genus: Takifugu

Family: Tetraodontidae

Order: Tetraodontiformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|432858075|ref|XP_004068815.1| PREDICTED: rho GTPase-activating protein 12-like [Oryzias latipes]

 Score = 67.8 bits (164), Expect = 8e-10,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 4/59 (6%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          V L+  YD+ Y   DG+ V I+EGE+  L+KKTN DWWQV R    S  KP YVPA+YV
Sbjct: 36 VVLEAQYDYSYRGADGRQVCIREGERFILLKKTNADWWQVRRIGAASKAKPLYVPATYV 94

Source: Oryzias latipes

Species: Oryzias latipes

Genus: Oryzias

Family: Adrianichthyidae

Order: Beloniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|348528805|ref|XP_003451906.1| PREDICTED: rho GTPase-activating protein 9-like [Oreochromis niloticus]

 Score = 67.4 bits (163), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 39/59 (66%), Gaps = 4/59 (6%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          V L+  YD+ Y   DG+ V I+EGE+  L+KKTN DWWQV R    S  KP YVPA+YV
Sbjct: 11 VVLEAQYDYSYRGADGRQVCIREGERFILLKKTNADWWQVRRIGAASKAKPLYVPATYV 69

Source: Oreochromis niloticus

Species: Oreochromis niloticus

Genus: Oreochromis

Family: Cichlidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|223647562|gb|ACN10539.1| Rho GTPase-activating protein 15 [Salmo salar]

 Score = 67.0 bits (162), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 31/59 (52%), Positives = 39/59 (66%), Gaps = 4/59 (6%)

Query: 6   VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
           V L+  YD+ Y   DG+ V I+EGE+  L++KTN DWWQV R    S  KP YVPA+YV
Sbjct: 60  VVLEAQYDYQYRGTDGRQVCIREGERFILLRKTNTDWWQVRRIGAASKAKPLYVPATYV 118

Source: Salmo salar

Species: Salmo salar

Genus: Salmo

Family: Salmonidae

Order: Salmoniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|317418795|emb|CBN80833.1| Rho GTPase-activating protein 12 [Dicentrarchus labrax]

 Score = 66.2 bits (160), Expect = 2e-09,   Method: Composition-based stats.
 Identities = 32/59 (54%), Positives = 38/59 (64%), Gaps = 4/59 (6%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYV 60
          V L+  YD+ Y   DG+ V I EGE+  L+KKTN DWWQV R    S  KP YVPA+YV
Sbjct: 36 VVLEAQYDYSYRGADGRQVCISEGERFVLLKKTNTDWWQVRRIGAASKTKPLYVPATYV 94

Source: Dicentrarchus labrax

Species: Dicentrarchus labrax

Genus: Dicentrarchus

Family: Moronidae

Order: Perciformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|449492172|ref|XP_002195522.2| PREDICTED: rho GTPase-activating protein 12 [Taeniopygia guttata]

 Score = 65.1 bits (157), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 40/95 (42%), Positives = 56/95 (58%), Gaps = 21/95 (22%)

Query: 8   LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV-EVYK- 64
           ++V YD++Y  KD K V I++GEK  L+KKTN DWWQV R  + KPFYVPA YV E+ + 
Sbjct: 15  IQVEYDYEYEAKDKKIV-IKQGEKYILVKKTNDDWWQVKRDENSKPFYVPAQYVKEIPRK 73

Query: 65  -----------------KLSNGNRNNVENINPTME 82
                            KL++G + + EN+N + E
Sbjct: 74  ALMPPVKQASMLPNNTLKLTHGLQRSTENVNKSPE 108

Source: Taeniopygia guttata

Species: Taeniopygia guttata

Genus: Taeniopygia

Family: Estrildidae

Order: Passeriformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	101
ZFIN|ZDB-GENE-040426-1727	817	arhgap12b "Rho GTPase activati	0.594	0.073	0.523	1.2e-13
UNIPROTKB|F1RWC6	848	ARHGAP12 "Uncharacterized prot	0.584	0.069	0.532	5.2e-11
RGD|1310017	813	Arhgap12 "Rho GTPase activatin	0.792	0.098	0.452	7e-11
ZFIN|ZDB-GENE-050809-38	831	arhgap12a "Rho GTPase activati	0.574	0.069	0.524	7.2e-11
UNIPROTKB|F1PR59	791	ARHGAP12 "Uncharacterized prot	0.584	0.074	0.532	3e-10
UNIPROTKB|F1PR61	838	ARHGAP12 "Uncharacterized prot	0.584	0.070	0.532	3.2e-10
ZFIN|ZDB-GENE-030131-3922	970	arhgap27 "Rho GTPase activatin	0.584	0.060	0.426	3.2e-10
UNIPROTKB|Q504X1	841	ARHGAP12 "Rho GTPase-activatin	0.584	0.070	0.532	3.2e-10
UNIPROTKB|Q8IWW6	846	ARHGAP12 "Rho GTPase-activatin	0.584	0.069	0.532	3.2e-10
UNIPROTKB|F1NB60	815	ARHGAP12 "Uncharacterized prot	0.455	0.056	0.612	3.3e-10

ZFIN|ZDB-GENE-040426-1727 arhgap12b "Rho GTPase activating protein 12b" [Danio rerio (taxid:7955)]

 Score = 161 (61.7 bits), Expect = 1.2e-13, Sum P(2) = 1.2e-13
 Identities = 33/63 (52%), Positives = 44/63 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSG-KPFYVPASYV-EVY 63
             V ++V YD++Y  KD K + I++GE   L++KTN+DWWQV R  G K FYVPA YV EV 
Sbjct:    17 VYIEVEYDYEYKAKD-KLISIRQGECYMLVRKTNEDWWQVRREEGTKAFYVPAQYVREVR 75

Query:    64 KKL 66
             + L
Sbjct:    76 RAL 78

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1RWC6 ARHGAP12 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 156 (60.0 bits), Expect = 5.2e-11, Sum P(2) = 5.2e-11
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct:    15 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVG 73

Query:    64 KK 65
             +K
Sbjct:    74 RK 75

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

RGD|1310017 Arhgap12 "Rho GTPase activating protein 12" [Rattus norvegicus (taxid:10116)]

 Score = 163 (62.4 bits), Expect = 7.0e-11, P = 7.0e-11
 Identities = 38/84 (45%), Positives = 53/84 (63%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV +  + K FYVPA YV EV 
Sbjct:    13 VYIEVEYDYEYEAKDRKIV-IRQGERYLLVKKTNDDWWQVRLDENSKAFYVPAQYVKEVT 71

Query:    64 KK-LSNGNRNNVENINPTMEKTRS 86
             +K L    +      N +M+ T+S
Sbjct:    72 RKALMPPVKQTTGLPNNSMKTTQS 95

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

ZFIN|ZDB-GENE-050809-38 arhgap12a "Rho GTPase activating protein 12a" [Danio rerio (taxid:7955)]

 Score = 163 (62.4 bits), Expect = 7.2e-11, P = 7.2e-11
 Identities = 32/61 (52%), Positives = 43/61 (70%)

Query:     8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVYKK 65
             ++V YD+DY +KD + + I+ GE   L+KKTN DWWQV +  + KPFYVPA YV EV + 
Sbjct:    13 IEVEYDYDYKSKD-RLITIKHGESYLLVKKTNDDWWQVRKDDASKPFYVPAQYVREVRRA 71

Query:    66 L 66
             L
Sbjct:    72 L 72

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1PR59 ARHGAP12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 157 (60.3 bits), Expect = 3.0e-10, P = 3.0e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct:    13 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVT 71

Query:    64 KK 65
             +K
Sbjct:    72 RK 73

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

UNIPROTKB|F1PR61 ARHGAP12 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 157 (60.3 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct:    13 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVT 71

Query:    64 KK 65
             +K
Sbjct:    72 RK 73

GO:0007165 "signal transduction" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

ZFIN|ZDB-GENE-030131-3922 arhgap27 "Rho GTPase activating protein 27" [Danio rerio (taxid:7955)]

 Score = 139 (54.0 bits), Expect = 3.2e-10, Sum P(2) = 3.2e-10
 Identities = 26/61 (42%), Positives = 38/61 (62%)

Query:     1 MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSG-KPFYVPASY 59
             M L    L V Y++ Y+ +DG+ V I+  E   L+ KTN++WW V + +  KPFY+PA Y
Sbjct:    16 MSLSQQVL-VNYEYTYTARDGRNVSIKPNEHYILVNKTNEEWWHVQKDAADKPFYIPAKY 74

Query:    60 V 60
             V
Sbjct:    75 V 75

GO:0005622 "intracellular" evidence=IEA

GO:0005543 "phospholipid binding" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

UNIPROTKB|Q504X1 ARHGAP12 "Rho GTPase-activating protein 12" [Homo sapiens (taxid:9606)]

 Score = 157 (60.3 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct:    15 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVT 73

Query:    64 KK 65
             +K
Sbjct:    74 RK 75

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

UNIPROTKB|Q8IWW6 ARHGAP12 "Rho GTPase-activating protein 12" [Homo sapiens (taxid:9606)]

 Score = 157 (60.3 bits), Expect = 3.2e-10, P = 3.2e-10
 Identities = 33/62 (53%), Positives = 43/62 (69%)

Query:     6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVY 63
             V ++V YD++Y  KD K V I++GE+  L+KKTN DWWQV    + K FYVPA YV EV 
Sbjct:    15 VYIEVEYDYEYEAKDRKIV-IKQGERYILVKKTNDDWWQVKPDENSKAFYVPAQYVKEVT 73

Query:    64 KK 65
             +K
Sbjct:    74 RK 75

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

GO:0005829 "cytosol" evidence=TAS

GO:0007264 "small GTPase mediated signal transduction" evidence=TAS

GO:0051056 "regulation of small GTPase mediated signal transduction" evidence=TAS

UNIPROTKB|F1NB60 ARHGAP12 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 142 (55.0 bits), Expect = 3.3e-10, Sum P(2) = 3.3e-10
 Identities = 30/49 (61%), Positives = 36/49 (73%)

Query:    19 KDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYV-EVYKK 65
             KD K V I++GEK  L+KKTN DWWQV R  + KPFYVPA YV E+ +K
Sbjct:     2 KDKKIV-IKQGEKYILVKKTNDDWWQVKRDENSKPFYVPAQYVKEIPRK 49

GO:0005543 "phospholipid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0007165 "signal transduction" evidence=IEA

GO:0005096 "GTPase activator activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q8IWW6	RHG12_HUMAN	No assigned EC number	0.5322	0.5841	0.0697	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	101
cd11888	54	cd11888, SH3_ARHGAP9_like, Src Homology 3 domain o	7e-20
cd12143	57	cd12143, SH3_ARHGAP9, Src Homology 3 domain of Rho	2e-16
cd12069	57	cd12069, SH3_ARHGAP27, Src Homology 3 domain of Rh	2e-14
cd12070	60	cd12070, SH3_ARHGAP12, Src Homology 3 domain of Rh	1e-11
cd11849	53	cd11849, SH3_SPIN90, Src homology 3 domain of SH3	6e-11
smart00326	56	smart00326, SH3, Src homology 3 domains	6e-09
cd11911	55	cd11911, SH3_CIP4-like, Src Homology 3 domain of C	3e-07
cd00174	51	cd00174, SH3, Src Homology 3 domain superfamily	3e-07
cd11775	57	cd11775, SH3_Sla1p_3, Third Src Homology 3 domain	5e-07
pfam00018	47	pfam00018, SH3_1, SH3 domain	4e-06
cd11808	53	cd11808, SH3_Alpha_Spectrin, Src homology 3 domain	6e-06
cd11768	54	cd11768, SH3_Tec_like, Src Homology 3 domain of Te	2e-05
cd11763	55	cd11763, SH3_SNX9_like, Src Homology 3 domain of S	2e-05
cd11765	51	cd11765, SH3_Nck_1, First Src Homology 3 domain of	4e-05
cd11806	53	cd11806, SH3_PRMT2, Src homology 3 domain of Prote	5e-05
cd12071	57	cd12071, SH3_FBP17, Src Homology 3 domain of Formi	1e-04
cd12072	57	cd12072, SH3_FNBP1L, Src Homology 3 domain of Form	1e-04
cd11855	55	cd11855, SH3_Sho1p, Src homology 3 domain of High	2e-04
cd11845	52	cd11845, SH3_Src_like, Src homology 3 domain of Sr	2e-04
cd11879	56	cd11879, SH3_Bem1p_2, Second Src Homology 3 domain	2e-04
cd11856	53	cd11856, SH3_p47phox_like, Src homology 3 domains	2e-04
cd11758	55	cd11758, SH3_CRK_N, N-terminal Src Homology 3 doma	3e-04
cd11772	53	cd11772, SH3_OSTF1, Src Homology 3 domain of metaz	3e-04
cd11908	56	cd11908, SH3_ITK, Src Homology 3 domain of Interle	4e-04
cd11819	54	cd11819, SH3_Cortactin_like, Src homology 3 domain	5e-04
cd11777	55	cd11777, SH3_CIP4_Bzz1_like, Src Homology 3 domain	6e-04
cd12006	56	cd12006, SH3_Fyn_Yrk, Src homology 3 domain of Fyn	6e-04
cd12007	58	cd12007, SH3_Yes, Src homology 3 domain of Yes Pro	6e-04
cd11899	58	cd11899, SH3_Nck2_1, First Src Homology 3 domain o	6e-04
cd12008	56	cd12008, SH3_Src, Src homology 3 domain of Src Pro	8e-04
cd11900	59	cd11900, SH3_Nck1_1, First Src Homology 3 domain o	8e-04
cd11912	55	cd11912, SH3_Bzz1_1, First Src Homology 3 domain o	9e-04
cd11896	55	cd11896, SH3_SNX33, Src Homology 3 domain of Sorti	0.002
cd11905	56	cd11905, SH3_Tec, Src Homology 3 domain of Tec (Ty	0.002
cd11848	55	cd11848, SH3_SLAP-like, Src homology 3 domain of S	0.003
cd11771	60	cd11771, SH3_Pex13p_fungal, Src Homology 3 domain	0.003
cd11955	53	cd11955, SH3_srGAP1-3, Src homology 3 domain of Sl	0.003
cd11962	54	cd11962, SH3_Abp1_fungi_C1, First C-terminal Src h	0.003

>gnl|CDD|212821 cd11888, SH3_ARHGAP9_like, Src Homology 3 domain of Rho GTPase-activating protein 9 and similar proteins

 Score = 75.5 bits (186), Expect = 7e-20
 Identities = 31/54 (57%), Positives = 39/54 (72%), Gaps = 1/54 (1%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASY 59
           + VLY F+Y+ KDG+ V I+EGE+  L+KK+N DWWQV R    KPFYVPA Y
Sbjct: 1  YVVVLYPFEYTGKDGRKVSIKEGERFLLLKKSNDDWWQVRRPGDSKPFYVPAQY 54

This subfamily is composed of Rho GTPase-activating proteins including mammalian ARHGAP9, and vertebrate ARHGAPs 12 and 27. RhoGAPs (or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP9 functions as a GAP for Rac and Cdc42, but not for RhoA. It negatively regulates cell migration and adhesion. It also acts as a docking protein for the MAP kinases Erk2 and p38alpha, and may facilitate cross-talk between the Rho GTPase and MAPK pathways to control actin remodeling. ARHGAP27, also called CAMGAP1, shows GAP activity towards Rac1 and Cdc42. It binds the adaptor protein CIN85 and may play a role in clathrin-mediated endocytosis. ARHGAP12 has been shown to display GAP activity towards Rac1. It plays a role in regulating HFG-driven cell growth and invasiveness. ARHGAPs in this subfamily contain SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 54

>gnl|CDD|213019 cd12143, SH3_ARHGAP9, Src Homology 3 domain of Rho GTPase-activating protein 9 and similar proteins

 Score = 66.5 bits (162), Expect = 2e-16
 Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 4/56 (7%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASY 59
          L  LY + Y+  DG+ V I EGE+  L++KTN DWWQV R    S+ +P +VPA+Y
Sbjct: 2  LCALYAYQYTGADGRQVSIAEGERFLLLRKTNSDWWQVRRLEAPSTSRPLFVPATY 57

Rho GTPase-activating proteins (RhoGAPs or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP9 functions as a GAP for Rac and Cdc42, but not for RhoA. It negatively regulates cell migration and adhesion. It also acts as a docking protein for the MAP kinases Erk2 and p38alpha, and may facilitate cross-talk between the Rho GTPase and MAPK pathways to control actin remodeling. It contains SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 57

>gnl|CDD|213002 cd12069, SH3_ARHGAP27, Src Homology 3 domain of Rho GTPase-activating protein 27

 Score = 61.8 bits (150), Expect = 2e-14
 Identities = 23/54 (42%), Positives = 36/54 (66%), Gaps = 1/54 (1%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEV 62
          V + F+Y+ KDG+ V I+  E+  L+++TN+ WW V R    +PFY+PA YV+ 
Sbjct: 4  VEHAFEYTGKDGRLVSIKPNERYILLRRTNEHWWHVRRDKGTRPFYIPAKYVKE 57

Rho GTPase-activating proteins (RhoGAPs or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP27, also called CAMGAP1, shows GAP activity towards Rac1 and Cdc42. It binds the adaptor protein CIN85 and may play a role in clathrin-mediated endocytosis. It contains SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 57

>gnl|CDD|213003 cd12070, SH3_ARHGAP12, Src Homology 3 domain of Rho GTPase-activating protein 12

 Score = 54.6 bits (131), Expect = 1e-11
 Identities = 31/55 (56%), Positives = 41/55 (74%), Gaps = 2/55 (3%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVE 61
          ++V YD+DY  KD K V I++GE+  L+KKTN DWWQV +  + KPFYVPA YV+
Sbjct: 3  IEVEYDYDYEAKDRKIV-IKQGERYILVKKTNDDWWQVKKDENSKPFYVPAQYVK 56

Rho GTPase-activating proteins (RhoGAPs or ARHGAPs) bind to Rho proteins and enhance the hydrolysis rates of bound GTP. ARHGAP12 has been shown to display GAP activity towards Rac1. It plays a role in regulating hepatocyte growth factor (HGF)-driven cell growth and invasiveness. It contains SH3, WW, Pleckstin homology (PH), and RhoGAP domains. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 60

>gnl|CDD|212783 cd11849, SH3_SPIN90, Src homology 3 domain of SH3 protein interacting with Nck, 90 kDa (SPIN90)

 Score = 52.7 bits (127), Expect = 6e-11
 Identities = 20/54 (37%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 8  LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           + LYDF   + +   +   EGE   L++++N  WW V   SG+  YVPA+YV+
Sbjct: 2  YRALYDF--KSAEPNTLSFSEGETFLLLERSNAHWWLVTNHSGETGYVPANYVK 53

SPIN90 is also called NCK interacting protein with SH3 domain (NCKIPSD), Dia-interacting protein (DIP), 54 kDa vimentin-interacting protein (VIP54), or WASP-interacting SH3-domain protein (WISH). It is an F-actin binding protein that regulates actin polymerization and endocytosis. It associates with the Arp2/3 complex near actin filaments and determines filament localization at the leading edge of lamellipodia. SPIN90 is expressed in the early stages of neuronal differentiation and plays a role in regulating growth cone dynamics and neurite outgrowth. It also interacts with IRSp53 and regulates cell motility by playing a role in the formation of membrane protrusions. SPIN90 contains an N-terminal SH3 domain, a proline-rich domain, and a C-terminal VCA (verprolin-homology and cofilin-like acidic) domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|214620 smart00326, SH3, Src homology 3 domains

 Score = 47.5 bits (114), Expect = 6e-09
 Identities = 14/56 (25%), Positives = 30/56 (53%), Gaps = 2/56 (3%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
            ++ LYD+     D   +  ++G+ + +++K++  WW+     GK    P++YVE
Sbjct: 3  PQVRALYDYTAQDPDE--LSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVE 56

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations. Length = 56

>gnl|CDD|212844 cd11911, SH3_CIP4-like, Src Homology 3 domain of Cdc42-Interacting Protein 4

 Score = 43.4 bits (103), Expect = 3e-07
 Identities = 22/55 (40%), Positives = 35/55 (63%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEV 62
            LYDFD  T +G  + ++EGE L ++++   D W +V +++G   YVP SY+EV
Sbjct: 3  TALYDFD-GTSEGT-LSMEEGEILLVLEEDGGDGWTRVRKNNGDEGYVPTSYIEV 55

This subfamily is composed of Cdc42-Interacting Protein 4 (CIP4), Formin Binding Protein 17 (FBP17), FormiN Binding Protein 1-Like (FNBP1L), and similar proteins. CIP4 and FNBP1L are Cdc42 effectors that bind Wiskott-Aldrich syndrome protein (WASP) and function in endocytosis. CIP4 and FBP17 bind to the Fas ligand and may be implicated in the inflammatory response. CIP4 may also play a role in phagocytosis. It functions downstream of Cdc42 in PDGF-dependent actin reorganization and cell migration, and also regulates the activity of PDGFRbeta. It uses Src as a substrate in regulating the invasiveness of breast tumor cells. CIP4 may also play a role in the pathogenesis of Huntington's disease. Members of this subfamily typically contain an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain, a central Cdc42-binding HR1 domain, and a C-terminal SH3 domain. The SH3 domain of CIP4 associates with Gapex-5, a Rab31 GEF. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212690 cd00174, SH3, Src Homology 3 domain superfamily

 Score = 42.8 bits (102), Expect = 3e-07
 Identities = 12/51 (23%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASY 59
          + LYD++    D   +  ++G+ + +++K +  WW+   + G+    PA+Y
Sbjct: 3  RALYDYEAQDDDE--LSFKKGDIITVLEKDDDGWWEGELNGGREGLFPANY 51

Src Homology 3 (SH3) domains are protein interaction domains that bind proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. Thus, they are referred to as proline-recognition domains (PRDs). SH3 domains are less selective and show more diverse specificity compared to other PRDs. They have been shown to bind peptide sequences that lack the PxxP motif; examples include the PxxDY motif of Eps8 and the RKxxYxxY sequence in SKAP55. SH3 domain containing proteins play versatile and diverse roles in the cell, including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies, among others. Many members of this superfamily are adaptor proteins that associate with a number of protein partners, facilitating complex formation and signal transduction. Length = 51

>gnl|CDD|212709 cd11775, SH3_Sla1p_3, Third Src Homology 3 domain of the fungal endocytic adaptor protein Sla1p

 Score = 42.7 bits (101), Expect = 5e-07
 Identities = 25/56 (44%), Positives = 38/56 (67%), Gaps = 4/56 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLI-KKTNKDWWQVIR-SSGKPFYVPASYVEV 62
          KVLYDFD  + D   + ++EG+ ++++  K +KDWW V   S+GK   VPASY+E+
Sbjct: 4  KVLYDFDAQSDD--ELTVKEGDVVYILDDKKSKDWWMVENVSTGKEGVVPASYIEI 57

Sla1p facilitates endocytosis by playing a role as an adaptor protein in coupling components of the actin cytoskeleton to the endocytic machinery. It interacts with Abp1p, Las17p and Pan1p, which are activator proteins of actin-related protein 2/3 (Arp2/3). Sla1p contains multiple domains including three SH3 domains, a SAM (sterile alpha motif) domain, and a Sla1 homology domain 1 (SHD1), which binds to the NPFXD motif that is found in many integral membrane proteins such as the Golgi-localized Arf-binding protein Lsb5p and the P4-ATPases, Drs2p and Dnf1p. The third SH3 domain of Sla1p can bind ubiquitin while retaining the ability to bind proline-rich ligands; monoubiquitination of target proteins signals internalization and sorting through the endocytic pathway. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|215659 pfam00018, SH3_1, SH3 domain

 Score = 40.2 bits (95), Expect = 4e-06
 Identities = 11/49 (22%), Positives = 25/49 (51%), Gaps = 2/49 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPA 57
            LYD+     D   +  ++G+ + +++K++  WW+     GK   +P+
Sbjct: 1  VALYDYTAREPD--ELSFKKGDIIIVLEKSDDGWWKGRLKGGKEGLIPS 47

SH3 (Src homology 3) domains are often indicative of a protein involved in signal transduction related to cytoskeletal organisation. First described in the Src cytoplasmic tyrosine kinase. The structure is a partly opened beta barrel. Length = 47

>gnl|CDD|212742 cd11808, SH3_Alpha_Spectrin, Src homology 3 domain of Alpha Spectrin

 Score = 39.8 bits (93), Expect = 6e-06
 Identities = 19/53 (35%), Positives = 34/53 (64%), Gaps = 1/53 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           V+  +DY  K  + V +++G+ L L+  +NKDWW+V   + +  +VPA+YV+
Sbjct: 1  CVVALYDYQEKSPREVSMKKGDILTLLNSSNKDWWKV-EVNDRQGFVPAAYVK 52

Spectrin is a major structural component of the red blood cell membrane skeleton and is important in erythropoiesis and membrane biogenesis. It is a flexible, rope-like molecule composed of two subunits, alpha and beta, which consist of many spectrin-type repeats. Alpha and beta spectrin associate to form heterodimers and tetramers; spectrin tetramer formation is critical for red cell shape and deformability. Defects in alpha spectrin have been associated with inherited hemolytic anemias including hereditary spherocytosis (HSp), hereditary elliptocytosis (HE), and hereditary pyropoikilocytosis (HPP). Alpha spectrin contains a middle SH3 domain and a C-terminal EF-hand binding motif in addition to multiple spectrin repeats. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212702 cd11768, SH3_Tec_like, Src Homology 3 domain of Tec-like Protein Tyrosine Kinases

 Score = 38.4 bits (90), Expect = 2e-05
 Identities = 11/48 (22%), Positives = 28/48 (58%)

Query: 14 FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          +D+   +   + +++GE+  ++  +N+ WW+    +G   Y+P++YV 
Sbjct: 6  YDFQPIEPGDLPLEKGEEYVVLDDSNEHWWRARDKNGNEGYIPSNYVT 53

The Tec (Tyrosine kinase expressed in hepatocellular carcinoma) subfamily is composed of Tec, Btk, Bmx (Etk), Itk (Tsk, Emt), Rlk (Txk), and similar proteins. They are cytoplasmic (or nonreceptor) tyr kinases containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. Most Tec subfamily members (except Rlk) also contain an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation. In addition, some members contain the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. Tec kinases are expressed mainly by haematopoietic cells, although Tec and Bmx are also found in endothelial cells. B-cells express Btk and Tec, while T-cells express Itk, Txk, and Tec. Collectively, Tec kinases are expressed in a variety of myeloid cells such as mast cells, platelets, macrophages, and dendritic cells. Each Tec kinase shows a distinct cell-type pattern of expression. The function of Tec kinases in lymphoid cells have been studied extensively. They play important roles in the development, differentiation, maturation, regulation, survival, and function of B-cells and T-cells. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212697 cd11763, SH3_SNX9_like, Src Homology 3 domain of Sorting Nexin 9 and similar proteins

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEV 62
          + LYDFD        + ++ GE L + ++   D W +   S G+    P+SYVE+
Sbjct: 3  RALYDFDSQPSGE--LSLRAGEVLTITRQDVGDGWLEGRNSRGEVGLFPSSYVEI 55

Sorting nexins (SNXs) are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNXs differ from each other in their lipid-binding specificity, subcellular localization and specific function in the endocytic pathway. This subfamily consists of SH3 domain containing SNXs including SNX9, SNX18, SNX33, and similar proteins. SNX9 is localized to plasma membrane endocytic sites and acts primarily in clathrin-mediated endocytosis, while SNX18 is localized to peripheral endosomal structures, and acts in a trafficking pathway that is clathrin-independent but relies on AP-1 and PACS1. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212699 cd11765, SH3_Nck_1, First Src Homology 3 domain of Nck adaptor proteins

 Score = 37.8 bits (88), Expect = 4e-05
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          V+  +DY+ +  + + I++ EKL L+  + K WW+V  SS +  YVP++YV
Sbjct: 2  VVAKYDYTAQGDQELSIKKNEKLTLLDDS-KHWWKVQNSSNQTGYVPSNYV 51

Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4), which show partly overlapping functions but also bind distinct targets. Their SH3 domains are involved in recruiting downstream effector molecules, such as the N-WASP/Arp2/3 complex, which when activated induces actin polymerization that results in the production of pedestals, or protrusions of the plasma membrane. The first SH3 domain of Nck proteins preferentially binds the PxxDY sequence, which is present in the CD3e cytoplasmic tail. This binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 51

>gnl|CDD|212740 cd11806, SH3_PRMT2, Src homology 3 domain of Protein arginine N-methyltransferase 2

 Score = 37.4 bits (87), Expect = 5e-05
 Identities = 14/46 (30%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 15 DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          D+   D   +  + G+KL +++K + DWW     +G   Y+PAS++
Sbjct: 7  DFVATDDSQLSFESGDKLLVLRKPSVDWWWA-EHNGCCGYIPASHL 51

PRMT2, also called HRMT1L1, belongs to the arginine methyltransferase protein family. It functions as a coactivator to both estrogen receptor alpha (ER-alpha) and androgen receptor (AR), presumably through arginine methylation. The ER-alpha transcription factor is involved in cell proliferation, differentiation, morphogenesis, and apoptosis, and is also implicated in the development and progression of breast cancer. PRMT2 and its variants are upregulated in breast cancer cells and may be involved in modulating the ER-alpha signaling pathway during formation of breast cancer. PRMT2 also plays a role in regulating the function of E2F transcription factors, which are critical cell cycle regulators, by binding to the retinoblastoma gene product (RB). It contains an N-terminal SH3 domain and an AdoMet binding domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|213004 cd12071, SH3_FBP17, Src Homology 3 domain of Formin Binding Protein 17

 Score = 36.5 bits (84), Expect = 1e-04
 Identities = 21/58 (36%), Positives = 35/58 (60%), Gaps = 3/58 (5%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEVY 63
          T K LY F+   ++   + + EGE L++I++   D W ++ R+  +  YVP SY+EVY
Sbjct: 2  TCKALYPFE--GQNEGTISVAEGEMLYVIEEDKGDGWTRIRRNEDEEGYVPTSYIEVY 57

Formin Binding Protein 17 (FBP17), also called FormiN Binding Protein 1 (FNBP1), is involved in dynamin-mediated endocytosis. It is recruited to clathrin-coated pits late in the endocytosis process and may play a role in the invagination and scission steps. FBP17 binds in vivo to tankyrase, a protein involved in telomere maintenance and mitogen activated protein kinase (MAPK) signaling. It contains an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain, a Cdc42-binding HR1 domain, and a C-terminal SH3 domain. The SH3 domain of the related protein, CIP4, associates with Gapex-5, a Rab31 GEF. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|213005 cd12072, SH3_FNBP1L, Src Homology 3 domain of Formin Binding Protein 1-Like

 Score = 36.5 bits (84), Expect = 1e-04
 Identities = 20/55 (36%), Positives = 34/55 (61%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEV 62
          K LY FD  + +G    ++EGE L++I++   D W +  + +G+  YVP SY+E+
Sbjct: 4  KALYPFD-GSNEGTLA-MKEGEVLYIIEEDKGDGWTRARKQNGEEGYVPTSYIEI 56

FormiN Binding Protein 1-Like (FNBP1L), also known as Toca-1 (Transducer of Cdc42-dependent actin assembly), forms a complex with neural Wiskott-Aldrich syndrome protein (N-WASP). The FNBP1L/N-WASP complex induces the formation of filopodia and endocytic vesicles. FNBP1L is required for Cdc42-induced actin assembly and is essential for autophagy of intracellular pathogens. It contains an N-terminal F-BAR domain, a central Cdc42-binding HR1 domain, and a C-terminal SH3 domain. The SH3 domain of the related protein, CIP4, associates with Gapex-5, a Rab31 GEF. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 57

>gnl|CDD|212789 cd11855, SH3_Sho1p, Src homology 3 domain of High osmolarity signaling protein Sho1p

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 15/56 (26%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
            + LY +D S  D   +  ++GE +  +  T+  WWQ  +S+G+    P++Y+++
Sbjct: 1  RARALYPYDASPDDPNELSFEKGE-ILEVSDTSGKWWQARKSNGETGICPSNYLQL 55

Sho1p (or Sho1), also called SSU81 (Suppressor of SUA8-1 mutation), is a yeast membrane protein that regulates adaptation to high salt conditions by activating the HOG (high-osmolarity glycerol) pathway. High salt concentrations lead to the localization to the membrane of the MAPKK Pbs2, which is then activated by the MAPKK Ste11 and in turn, activates the MAPK Hog1. Pbs2 is localized to the membrane though the interaction of its PxxP motif with the SH3 domain of Sho1p. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212779 cd11845, SH3_Src_like, Src homology 3 domain of Src kinase-like Protein Tyrosine Kinases

 Score = 36.0 bits (84), Expect = 2e-04
 Identities = 16/50 (32%), Positives = 31/50 (62%), Gaps = 3/50 (6%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASY 59
          LYD++  T D   +  ++G++L ++  ++ DWW     S+GK  Y+P++Y
Sbjct: 5  LYDYEARTDDD--LSFKKGDRLQILDDSDGDWWLARHLSTGKEGYIPSNY 52

Src subfamily members include Src, Lck, Hck, Blk, Lyn, Fgr, Fyn, Yrk, Yes, and Brk. Src (or c-Src) proteins are cytoplasmic (or non-receptor) PTKs which are anchored to the plasma membrane. They contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). However, Brk lacks the N-terminal myristoylation sites. Src proteins are involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. They were identified as the first proto-oncogene products, and they regulate cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Src kinases are overexpressed in a variety of human cancers, making them attractive targets for therapy. They are also implicated in acute inflammatory responses and osteoclast function. Src, Fyn, Yes, and Yrk are widely expressed, while Blk, Lck, Hck, Fgr, Lyn, and Brk show a limited expression pattern. This subfamily also includes Drosophila Src42A, Src oncogene at 42A (also known as Dsrc41) which accumulates at sites of cell-cell or cell-matrix adhesion, and participates in Drosphila development and wound healing. It has been shown to promote tube elongation in the tracheal system, is essential for proper cell-cell matching during dorsal closure, and regulates cell-cell contacts in developing Drosophila eyes. The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 52

>gnl|CDD|212812 cd11879, SH3_Bem1p_2, Second Src Homology 3 domain of Bud emergence protein 1 and similar domains

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 4/55 (7%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV--IRSSGKPFYVPASYVEV 62
          VLYDF     D   +  + G+ + +   +N +W+    I   G P  +P S+VE+
Sbjct: 4  VLYDFKAERPD--ELDAKAGDAIIICAHSNYEWFVAKPIGRLGGPGLIPVSFVEI 56

Members of this subfamily bear similarity to Saccharomyces cerevisiae Bem1p, containing two Src Homology 3 (SH3) domains at the N-terminus, a central PX domain, and a C-terminal PB1 domain. Bem1p is a scaffolding protein that is critical for proper Cdc42p activation during bud formation in yeast. During budding and mating, Bem1p migrates to the plasma membrane where it can serve as an adaptor for Cdc42p and some other proteins. Bem1p also functions as an effector of the G1 cyclin Cln3p and the cyclin-dependent kinase Cdc28p in promoting vacuolar fusion. SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies. Length = 56

>gnl|CDD|212790 cd11856, SH3_p47phox_like, Src homology 3 domains of the p47phox subunit of NADPH oxidase and similar domains

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 18/52 (34%), Positives = 30/52 (57%), Gaps = 3/52 (5%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           + D++    D   + +QEGE + +++K +  WW V R   K  +VPASY+E
Sbjct: 4  AIADYEAQGDDE--ISLQEGEVVEVLEKNDSGWWYV-RKGDKEGWVPASYLE 52

This family is composed of the tandem SH3 domains of p47phox subunit of NADPH oxidase and Nox Organizing protein 1 (NoxO1), the four SH3 domains of Tks4 (Tyr kinase substrate with four SH3 domains), the five SH3 domains of Tks5, the SH3 domain of obscurin, Myosin-I, and similar domains. Most members of this group also contain Phox homology (PX) domains, except for obscurin and Myosin-I. p47phox and NoxO1 are regulators of the phagocytic NADPH oxidase complex (also called Nox2 or gp91phox) and nonphagocytic NADPH oxidase Nox1, respectively. They play roles in the activation of their respective NADPH oxidase, which catalyzes the transfer of electrons from NADPH to molecular oxygen to form superoxide. Tks proteins are Src substrates and scaffolding proteins that play important roles in the formation of podosomes and invadopodia, the dynamic actin-rich structures that are related to cell migration and cancer cell invasion. Obscurin is a giant muscle protein that plays important roles in the organization and assembly of the myofibril and the sarcoplasmic reticulum. Type I myosins (Myosin-I) are actin-dependent motors in endocytic actin structures and actin patches. They play roles in membrane traffic in endocytic and secretory pathways, cell motility, and mechanosensing. Myosin-I contains an N-terminal actin-activated ATPase, a phospholipid-binding TH1 (tail homology 1) domain, and a C-terminal extension which includes an F-actin-binding TH2 domain, an SH3 domain, and an acidic peptide that participates in activating the Arp2/3complex. The SH3 domain of myosin-I is required for myosin-I-induced actin polymerization. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212692 cd11758, SH3_CRK_N, N-terminal Src Homology 3 domain of Ct10 Regulator of Kinase adaptor proteins

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           ++ L+DF  +  D + +  ++GE L +I+K  + WW    S GK   +P  YVE
Sbjct: 2  YVRALFDFPGN--DDEDLPFKKGEILTVIRKPEEQWWNARNSEGKTGMIPVPYVE 54

CRK adaptor proteins consists of SH2 and SH3 domains, which bind tyrosine-phosphorylated peptides and proline-rich motifs, respectively. They function downstream of protein tyrosine kinases in many signaling pathways started by various extracellular signals, including growth and differentiation factors. Cellular CRK (c-CRK) contains a single SH2 domain, followed by N-terminal and C-terminal SH3 domains. It is involved in the regulation of many cellular processes including cell growth, motility, adhesion, and apoptosis. CRK has been implicated in the malignancy of various human cancers. The N-terminal SH3 domain of CRK binds a number of target proteins including DOCK180, C3G, SOS, and cABL. The CRK family includes two alternatively spliced protein forms, CRKI and CRKII, that are expressed by the CRK gene, and the CRK-like (CRKL) protein, which is expressed by a distinct gene (CRKL). SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212706 cd11772, SH3_OSTF1, Src Homology 3 domain of metazoan osteoclast stimulating factor 1

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 16/53 (30%), Positives = 30/53 (56%), Gaps = 3/53 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          + LYD++    D      +EG+ L++  K++ +WW+     GK   +P++YVE
Sbjct: 3  RALYDYEAQHPDELS--FEEGDLLYISDKSDPNWWKA-TCGGKTGLIPSNYVE 52

OSTF1, also named OSF or SH3P2, is a signaling protein containing SH3 and ankyrin-repeat domains. It acts through a Src-related pathway to enhance the formation of osteoclasts and bone resorption. It also acts as a negative regulator of cell motility. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212841 cd11908, SH3_ITK, Src Homology 3 domain of Interleukin-2-inducible T-cell Kinase

 Score = 35.4 bits (81), Expect = 4e-04
 Identities = 16/51 (31%), Positives = 29/51 (56%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          V+  +DY T D + + ++  E+  L+  +   WW+V   +G   YVP+SY+
Sbjct: 3  VIALYDYQTNDPQELALRYNEEYHLLDSSEIHWWRVQDKNGHEGYVPSSYL 53

ITK (also known as Tsk or Emt) is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. ITK is expressed in T-cells and mast cells, and is important in their development and differentiation. Of the three Tec kinases expressed in T-cells, ITK plays the predominant role in T-cell receptor (TCR) signaling. It is activated by phosphorylation upon TCR crosslinking and is involved in the pathway resulting in phospholipase C-gamma1 activation and actin polymerization. It also plays a role in the downstream signaling of the T-cell costimulatory receptor CD28, the T-cell surface receptor CD2, and the chemokine receptor CXCR4. In addition, ITK is crucial for the development of T-helper(Th)2 effector responses. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212753 cd11819, SH3_Cortactin_like, Src homology 3 domain of Cortactin and related proteins

 Score = 35.0 bits (81), Expect = 5e-04
 Identities = 16/53 (30%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          K LYD  Y   +   +   EG+ +  I++ ++ WW  + + G+    PA+YVE
Sbjct: 3  KALYD--YQAAEDNEISFVEGDIITQIEQIDEGWWLGVNAKGQKGLFPANYVE 53

This subfamily includes cortactin, Abp1 (actin-binding protein 1), hematopoietic lineage cell-specific protein 1 (HS1), and similar proteins. These proteins are involved in regulating actin dynamics through direct or indirect interaction with the Arp2/3 complex, which is required to initiate actin polymerization. They all contain at least one C-terminal SH3 domain. Cortactin and HS1 bind Arp2/3 and actin through an N-terminal region that contains an acidic domain and several copies of a repeat domain found in cortactin and HS1. Abp1 binds actin via an N-terminal actin-depolymerizing factor (ADF) homology domain. Yeast Abp1 binds Arp2/3 directly through two acidic domains. Mammalian Abp1 does not directly interact with Arp2/3; instead, it regulates actin dynamics indirectly by interacting with dynamin and WASP family proteins. The C-terminal region of these proteins acts as an adaptor or scaffold that can connect membrane trafficking and signaling proteins that bind the SH3 domain within the actin network. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

>gnl|CDD|212711 cd11777, SH3_CIP4_Bzz1_like, Src Homology 3 domain of Cdc42-Interacting Protein 4, Bzz1 and similar domains

 Score = 34.9 bits (80), Expect = 6e-04
 Identities = 21/55 (38%), Positives = 33/55 (60%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEV 62
          K LY F  S++    + + EGEKL L+++   D W +V R +G+  YVP SY+ +
Sbjct: 3  KALYAFVGSSEG--TISMTEGEKLSLVEEDKGDGWTRVRRDTGEEGYVPTSYIRI 55

This subfamily is composed of Cdc42-Interacting Protein 4 (CIP4) and similar proteins such as Formin Binding Protein 17 (FBP17) and FormiN Binding Protein 1-Like (FNBP1L), as well as yeast Bzz1 (or Bzz1p). CIP4 and FNBP1L are Cdc42 effectors that bind Wiskott-Aldrich syndrome protein (WASP) and function in endocytosis. CIP4 and FBP17 bind to the Fas ligand and may be implicated in the inflammatory response. CIP4 may also play a role in phagocytosis. Bzz1 is also a WASP/Las17-interacting protein involved in endocytosis and trafficking to the vacuole. It physically interacts with type I myosins and functions in the early steps of endocytosis. Members of this subfamily contain an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs) domain as well as at least one C-terminal SH3 domain. Bzz1 contains a second SH3 domain at the C-terminus. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212939 cd12006, SH3_Fyn_Yrk, Src homology 3 domain of Fyn and Yrk Protein Tyrosine Kinases

 Score = 34.6 bits (79), Expect = 6e-04
 Identities = 16/51 (31%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV 60
          LYD++  T+D   +   +GEK  ++  +  DWW+    ++G+  Y+P++YV
Sbjct: 6  LYDYEARTEDD--LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYV 54

Fyn and Yrk (Yes-related kinase) are members of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. Fyn, together with Lck, plays a critical role in T-cell signal transduction by phosphorylating ITAM (immunoreceptor tyr activation motif) sequences on T-cell receptors, ultimately leading to the proliferation and differentiation of T-cells. In addition, Fyn is involved in the myelination of neurons, and is implicated in Alzheimer's and Parkinson's diseases. Yrk has been detected only in chickens. It is primarily found in neuronal and epithelial cells and in macrophages. It may play a role in inflammation and in response to injury. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212940 cd12007, SH3_Yes, Src homology 3 domain of Yes Protein Tyrosine Kinase

 Score = 34.6 bits (79), Expect = 6e-04
 Identities = 17/51 (33%), Positives = 31/51 (60%), Gaps = 3/51 (5%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV 60
          LYD++  T +   +  ++GE+  +I  T  DWW+    ++GK  Y+P++YV
Sbjct: 6  LYDYEARTTED--LSFKKGERFQIINNTEGDWWEARSIATGKNGYIPSNYV 54

Yes (or c-Yes) is a member of the Src subfamily of proteins, which are cytoplasmic (or non-receptor) PTKs. c-Yes kinase is the cellular homolog of the oncogenic protein (v-Yes) encoded by the Yamaguchi 73 and Esh sarcoma viruses. It displays functional overlap with other Src subfamily members, particularly Src. It also shows some unique functions such as binding to occludins, transmembrane proteins that regulate extracellular interactions in tight junctions. Yes also associates with a number of proteins in different cell types that Src does not interact with, like JAK2 and gp130 in pre-adipocytes, and Pyk2 in treated pulmonary vein endothelial cells. Although the biological function of Yes remains unclear, it appears to have a role in regulating cell-cell interactions and vesicle trafficking in polarized cells. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212832 cd11899, SH3_Nck2_1, First Src Homology 3 domain of Nck2 adaptor protein

 Score = 34.7 bits (79), Expect = 6e-04
 Identities = 17/52 (32%), Positives = 35/52 (67%), Gaps = 1/52 (1%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          V+  +DY+ +  + + I++ E+L+L+  + K WW+V  ++ +  YVP++YVE
Sbjct: 6  VIAKWDYTAQQDQELDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNYVE 56

Nck2 (also called Nckbeta or Growth factor receptor-bound protein 4, Grb4) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds neuronal signaling proteins such as ephrinB and Disabled-1 (Dab-1) exclusively. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The first SH3 domain of Nck2 binds the PxxDY sequence in the CD3e cytoplasmic tail; this binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 58

>gnl|CDD|212941 cd12008, SH3_Src, Src homology 3 domain of Src Protein Tyrosine Kinase

 Score = 34.3 bits (78), Expect = 8e-04
 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 1/48 (2%)

Query: 14 FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV 60
          +DY ++    +  ++GE+L ++  T  DWW     ++G+  Y+P++YV
Sbjct: 6  YDYESRTETDLSFKKGERLQIVNNTEGDWWLAHSLTTGQTGYIPSNYV 53

Src (or c-Src) is a cytoplasmic (or non-receptor) PTK and is the vertebrate homolog of the oncogenic protein (v-Src) from Rous sarcoma virus. Together with other Src subfamily proteins, it is involved in signaling pathways that regulate cytokine and growth factor responses, cytoskeleton dynamics, cell proliferation, survival, and differentiation. Src also play a role in regulating cell adhesion, invasion, and motility in cancer cells, and tumor vasculature, contributing to cancer progression and metastasis. Elevated levels of Src kinase activity have been reported in a variety of human cancers. Several inhibitors of Src have been developed as anti-cancer drugs. Src is also implicated in acute inflammatory responses and osteoclast function. Src kinases contain an N-terminal SH4 domain with a myristoylation site, followed by SH3 and SH2 domains, a tyr kinase domain, and a regulatory C-terminal region containing a conserved tyr. They are activated by autophosphorylation at the tyr kinase domain, but are negatively regulated by phosphorylation at the C-terminal tyr by Csk (C-terminal Src Kinase). The SH3 domain of Src kinases contributes to substrate recruitment by binding adaptor proteins/substrates, and regulation of kinase activity through an intramolecular interaction. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212833 cd11900, SH3_Nck1_1, First Src Homology 3 domain of Nck1 adaptor protein

 Score = 34.3 bits (78), Expect = 8e-04
 Identities = 18/52 (34%), Positives = 33/52 (63%), Gaps = 1/52 (1%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          V+  FDY  +  + + I++ E+L+L+  + K WW+V  +  K  +VP++YVE
Sbjct: 5  VVAKFDYVAQQDQELDIKKNERLWLLDDS-KSWWRVRNAMNKTGFVPSNYVE 55

Nck1 (also called Nckalpha) plays a crucial role in connecting signaling pathways of tyrosine kinase receptors and important effectors in actin dynamics and cytoskeletal remodeling. It binds and activates RasGAP, resulting in the downregulation of Ras. It is also involved in the signaling of endothilin-mediated inhibition of cell migration. Nck adaptor proteins regulate actin cytoskeleton dynamics by linking proline-rich effector molecules to protein tyrosine kinases and phosphorylated signaling intermediates. They contain three SH3 domains and a C-terminal SH2 domain. They function downstream of the PDGFbeta receptor and are involved in Rho GTPase signaling and actin dynamics. Vertebrates contain two Nck adaptor proteins: Nck1 (also called Nckalpha) and Nck2, which show partly overlapping functions but also bind distinct targets. The first SH3 domain of Nck1 binds the PxxDY sequence in the CD3e cytoplasmic tail; this binding inhibits phosphorylation by Src kinases, resulting in the downregulation of TCR surface expression. SH3 domains are protein interaction domains that usually bind to proline-rich ligands with moderate affinity and selectivity, preferentially a PxxP motif. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 59

>gnl|CDD|212845 cd11912, SH3_Bzz1_1, First Src Homology 3 domain of Bzz1 and similar domains

 Score = 34.1 bits (79), Expect = 9e-04
 Identities = 21/55 (38%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV 62
          KVLYD+  S  D   V I EGE++ +++  +   W  +R  SG+   VP SY+E+
Sbjct: 3  KVLYDYTASGDD--EVSISEGEEVTVLEPDDGSGWTKVRNGSGEEGLVPTSYIEI 55

Bzz1 (or Bzz1p) is a WASP/Las17-interacting protein involved in endocytosis and trafficking to the vacuole. It physically interacts with type I myosins and functions in the early steps of endocytosis. Together with other proteins, it induces membrane scission in yeast. Bzz1 contains an N-terminal F-BAR (FES-CIP4 Homology and Bin/Amphiphysin/Rvs), a central coiled-coil, and two C-terminal SH3 domains. This model represents the first C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212829 cd11896, SH3_SNX33, Src Homology 3 domain of Sorting Nexin 33

 Score = 33.4 bits (76), Expect = 0.002
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEV 62
          + LY F    K+   + IQE E+L +  + + D W Q   S G+    PASYVE+
Sbjct: 3  RALYSFQSENKE--EINIQENEELVIFSENSLDGWLQGQNSRGETGLFPASYVEI 55

SNX33 interacts with Wiskott-Aldrich syndrome protein (WASP) and plays a role in the maintenance of cell shape and cell cycle progression. It modulates the shedding and endocytosis of cellular prion protein (PrP(c)) and amyloid precursor protein (APP). SNXs are Phox homology (PX) domain containing proteins that are involved in regulating membrane traffic and protein sorting in the endosomal system. SNX33 also contains BAR and SH3 domains. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212838 cd11905, SH3_Tec, Src Homology 3 domain of Tec (Tyrosine kinase expressed in hepatocellular carcinoma)

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 13/47 (27%), Positives = 28/47 (59%)

Query: 14 FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          +D+   +   +R++ GE+  +++K +  WW+     GK  Y+P++YV
Sbjct: 7  YDFQPTEPHDLRLETGEEYVILEKNDVHWWKARDKYGKEGYIPSNYV 53

Tec is a cytoplasmic (or nonreceptor) tyr kinase containing Src homology protein interaction domains (SH3, SH2) N-terminal to the catalytic tyr kinase domain. It also contains an N-terminal pleckstrin homology (PH) domain, which binds the products of PI3K and allows membrane recruitment and activation, and the Tec homology (TH) domain, which contains proline-rich and zinc-binding regions. It is more widely-expressed than other Tec subfamily kinases. Tec is found in endothelial cells, both B- and T-cells, and a variety of myeloid cells including mast cells, erythroid cells, platelets, macrophages and neutrophils. Tec is a key component of T-cell receptor (TCR) signaling, and is important in TCR-stimulated proliferation, IL-2 production and phospholipase C-gamma1 activation. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 56

>gnl|CDD|212782 cd11848, SH3_SLAP-like, Src homology 3 domain of Src-Like Adaptor Proteins

 Score = 32.9 bits (75), Expect = 0.003
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 4/55 (7%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV 60
          TL  L D  Y +     + ++ GE L ++     DWW+V+   +G+  Y+P+ +V
Sbjct: 1  TLVALGD--YPSGGPAELSLRLGEPLTIVSD-EGDWWKVLSEVTGRESYIPSVHV 52

SLAPs are adaptor proteins with limited similarity to Src family tyrosine kinases. They contain an N-terminal SH3 domain followed by an SH2 domain, and a unique C-terminal sequence. They function in regulating the signaling, ubiquitination, and trafficking of T-cell receptor (TCR) and B-cell receptor (BCR) components. Vertebrates contain two SLAPs, named SLAP (or SLA1) and SLAP2 (or SLA2). SLAP has been shown to interact with the EphA receptor, EpoR, Lck, PDGFR, Syk, CD79a, among others, while SLAP2 interacts with CSF1R. Both SLAPs interact with c-Cbl, LAT, CD247, and Zap70. SLAP modulates TCR surface expression levels as well as surface and total BCR levels. As an adaptor to c-Cbl, SLAP increases the ubiquitination, intracellular retention, and targeted degradation of the BCR complex components. SLAP2 plays a role in c-Cbl-dependent regulation of CSF1R, a tyrosine kinase important for myeloid cell growth and differentiation. The SH3 domain of SLAP forms a complex with v-Abl. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 55

>gnl|CDD|212705 cd11771, SH3_Pex13p_fungal, Src Homology 3 domain of fungal peroxisomal membrane protein Pex13p

 Score = 33.0 bits (76), Expect = 0.003
 Identities = 15/59 (25%), Positives = 31/59 (52%), Gaps = 6/59 (10%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-----DWWQVIRSSGKPFYVPASYVEV 62
          + LYDF         + +++G+ + ++ KT+      +WW+     G+  + P++YVEV
Sbjct: 3  RALYDF-TPENPEMELSLKKGDIVAVLSKTDPLGRDSEWWKGRTRDGRIGWFPSNYVEV 60

Pex13p, located in the peroxisomal membrane, contains two transmembrane regions and a C-terminal SH3 domain. It binds to the peroxisomal targeting type I (PTS1) receptor Pex5p and the docking factor Pex14p through its SH3 domain. It is essential for both PTS1 and PTS2 protein import pathways into the peroxisomal matrix. Pex13p binds Pex14p, which contains a PxxP motif, in a classical fashion to the proline-rich ligand binding site of its SH3 domain. It binds the WxxxF/Y motif of Pex5p in a novel site that does not compete with Pex14p binding. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 60

>gnl|CDD|212888 cd11955, SH3_srGAP1-3, Src homology 3 domain of Slit-Robo GTPase Activating Proteins 1, 2, and 3

 Score = 32.6 bits (74), Expect = 0.003
 Identities = 15/49 (30%), Positives = 25/49 (51%), Gaps = 1/49 (2%)

Query: 14 FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          FDY  +  + +  ++G  L L  + + DWW+  R +G    VP  Y+ V
Sbjct: 6  FDYVGRSARELSFKKGASLLLYHRASDDWWEG-RHNGIDGLVPHQYIVV 53

srGAP1, also called Rho GTPase-Activating Protein 13 (ARHGAP13), is a Cdc42- and RhoA-specific GAP and is expressed later in the development of central nervous system tissues. srGAP2 is expressed in zones of neuronal differentiation. It plays a role in the regeneration of neurons and axons. srGAP3, also called MEGAP (MEntal disorder associated GTPase-Activating Protein), is a Rho GAP with activity towards Rac1 and Cdc42. It impacts cell migration by regulating actin and microtubule cytoskeletal dynamics. The association between srGAP3 haploinsufficiency and mental retardation is under debate. srGAPs are Rho GAPs that interact with Robo1, the transmembrane receptor of Slit proteins. Slit proteins are secreted proteins that control axon guidance and the migration of neurons and leukocytes. srGAPs contain an N-terminal F-BAR domain, a Rho GAP domain, and a C-terminal SH3 domain. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 53

>gnl|CDD|212895 cd11962, SH3_Abp1_fungi_C1, First C-terminal Src homology 3 domain of Fungal Actin-binding protein 1

 Score = 32.8 bits (75), Expect = 0.003
 Identities = 15/49 (30%), Positives = 27/49 (55%)

Query: 14 FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          +DY   +   + + EGE +  I+  ++DWW    S G+    P++YVE+
Sbjct: 6  YDYEKDEDNEIELVEGEIVTNIEMVDEDWWMGTNSKGESGLFPSNYVEL 54

Abp1 is an adaptor protein that functions in receptor-mediated endocytosis and vesicle trafficking. It contains an N-terminal actin-binding module, the actin-depolymerizing factor (ADF) homology domain, a central proline-rich region, and a C-terminal SH3 domain (many yeast Abp1 proteins contain two C-terminal SH3 domains). Yeast Abp1 also contains two acidic domains that bind directly to the Arp2/3 complex, which is required to initiate actin polymerization. The SH3 domain of yeast Abp1 binds and localizes the kinases, Ark1p and Prk1p, which facilitate actin patch disassembly following vesicle internalization. It also mediates the localization to the actin patch of the synaptojanin-like protein, Sjl2p, which plays a key role in endocytosis. SH3 domains are protein interaction domains that bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs. They play versatile and diverse roles in the cell including the regulation of enzymes, changing the subcellular localization of signaling pathway components, and mediating the formation of multiprotein complex assemblies. Length = 54

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	101
PF14604	49	SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3	99.73
PF07653	55	SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3	99.62
PF00018	48	SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Ho	99.59
KOG2199|consensus	462		99.55
smart00326	58	SH3 Src homology 3 domains. Src homology 3 (SH3) d	99.51
cd00174	54	SH3 Src homology 3 domains; SH3 domains bind to pr	99.49
KOG1118|consensus	366		99.47
KOG2070|consensus	661		99.47
KOG1029|consensus	1118		99.43
KOG4226|consensus	379		99.4
KOG4792|consensus	293		99.28
KOG0162|consensus	1106		99.26
KOG4225|consensus	489		99.25
KOG2856|consensus	472		99.15
KOG4226|consensus	379		99.13
KOG0515|consensus	752		99.09
KOG1264|consensus	1267		99.08
KOG2996|consensus	865		99.03
KOG3875|consensus	362		98.97
KOG1029|consensus	1118		98.93
KOG4348|consensus	627		98.92
KOG4348|consensus	627		98.91
KOG2546|consensus	483		98.83
KOG3655|consensus	484		98.83
KOG4225|consensus	489		98.81
KOG1843|consensus	473		98.79
KOG4278|consensus	1157		98.7
KOG3601|consensus	222		98.65
KOG0197|consensus	468		98.53
KOG1702|consensus	264		98.45
KOG3557|consensus	721		98.42
KOG0609|consensus	542		98.25
KOG3523|consensus	695		98.19
KOG2528|consensus	490		98.19
KOG3632|consensus	1335		97.92
KOG2222|consensus	848		97.8
KOG3601|consensus	222		97.76
PF14603	89	hSH3: Helically-extended SH3 domain; PDB: 1RI9_A.	97.73
KOG4773|consensus	386		97.72
KOG3775|consensus	482		97.67
KOG4575|consensus	874		97.61
KOG3725|consensus	375		97.4
KOG3771|consensus	460		97.33
PF08239	55	SH3_3: Bacterial SH3 domain; InterPro: IPR013247 S	97.18
KOG4792|consensus	293		97.17
KOG0199|consensus	1039		97.14
KOG3565|consensus	640		97.04
KOG4429|consensus	421		97.03
KOG1451|consensus	812		96.92
smart00287	63	SH3b Bacterial SH3 domain homologues.	96.72
PRK10884	206	SH3 domain-containing protein; Provisional	96.55
KOG0040|consensus	2399		96.31
KOG3632|consensus	1335		95.95
KOG3812|consensus	475		95.2
PF06347	55	SH3_4: Bacterial SH3 domain; InterPro: IPR010466 S	94.11
KOG2996|consensus	865		93.91
PRK13914	481	invasion associated secreted endopeptidase; Provis	93.76
COG3103	205	SH3 domain protein [Signal transduction mechanisms	93.67
smart00743	61	Agenet Tudor-like domain present in plant sequence	86.99
PF11302	75	DUF3104: Protein of unknown function (DUF3104); In	86.81
KOG3705|consensus	580		86.25
PF12913	54	SH3_6: SH3 domain of the SH3b1 type; PDB: 3M1U_B.	84.97
KOG3580|consensus	1027		81.17

>PF14604 SH3_9: Variant SH3 domain; PDB: 2CRE_A 2E5K_A 2CT3_A 2DE0_X 2D8H_A 2DA9_A 2X3X_E 2X3W_D 2KRN_A 2ED0_A

Probab=99.73  E-value=7.2e-18  Score=91.09  Aligned_cols=49  Identities=29%  Similarity=0.704  Sum_probs=44.1

Q ss_pred             EEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceE
Q psy6758          10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE   61 (101)
Q Consensus        10 aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~   61 (101)
                      |+|+|.++.++  ||+|++||+|.|+.+.+++||.+++ +|+.|+||++||+
T Consensus         1 Al~~y~~~~~d--ELs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yV~   49 (49)
T PF14604_consen    1 ALYDYEAQDPD--ELSFKKGDVITVLEKSDDGWWYGRN-TGRTGLFPANYVE   49 (49)
T ss_dssp             ESSCBCSSSTT--B-EB-TTEEEEEEEESSTSEEEEEE-TTEEEEEEGGGEE
T ss_pred             CCccCCCCCcC--EeeEcCCCEEEEEEeCCCCEEEEEE-CCEEEEECHHhCC
Confidence            78999998887  9999999999999998899999998 8999999999985

...

>PF07653 SH3_2: Variant SH3 domain; InterPro: IPR011511 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.62  E-value=1.2e-15  Score=83.98  Aligned_cols=54  Identities=22%  Similarity=0.564  Sum_probs=46.3

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEE-EcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLI-KKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl-~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      +++|++||.+..++  +|+|++||+|.|+ ++.+++||.++. +|+.|+||++||+++
T Consensus         1 ~~~a~~d~~~~~~~--~Ls~~~Gd~i~v~~~~~~~~ww~~~~-~g~~G~~P~~~v~~~   55 (55)
T PF07653_consen    1 YYRAIFDYVAEDPD--ELSFKKGDVIEVLGEKDDDGWWLGEN-NGRRGWFPSSYVEEI   55 (55)
T ss_dssp             EEEESSSBESSSTT--B-EB-TTEEEEEEEEECSTSEEEEEE-TTEEEEEEGGGEEEH
T ss_pred             CEEEeEEECCCCCC--ceEEecCCEEEEEEeecCCCEEEEEE-CCcEEEEcHHHEEEC
Confidence            47899999987666  9999999999999 777789999999 899999999999863

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This entry represents a variant of the SH3 domain.; PDB: 1I1J_B 1K0X_A 1HJD_A 2KEA_A 1KJW_A 1JXM_A 1JXO_B 2EBP_A 2DL3_A 2EYX_A ....

>PF00018 SH3_1: SH3 domain; InterPro: IPR001452 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=99.59  E-value=2.6e-15  Score=80.53  Aligned_cols=47  Identities=34%  Similarity=0.773  Sum_probs=42.1

Q ss_pred             EEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC-CcEEEEcC
Q psy6758           9 KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPA   57 (101)
Q Consensus         9 ~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~-g~~G~vP~   57 (101)
                      +|+|+|+++..+  +|+|++||.|.|+++.+.+||.+++.. +++|+||+
T Consensus         1 ~Alydf~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~~~~G~vP~   48 (48)
T PF00018_consen    1 RALYDFDAEDPD--ELSFKKGDIIEVLEKSDDGWWKVRNESTGKEGWVPS   48 (48)
T ss_dssp             EESSCBETSSTT--BSEB-TTEEEEEEEESSSSEEEEEETTTTEEEEEEG
T ss_pred             CCCeeeCCCCCC--EEeEECCCEEEEEEecCCCEEEEEECCCCcEEEeeC
Confidence            699999998777  999999999999999988999999965 69999996

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. The crystal structure of the SH3 domain of the cytoskeletal protein spectrin, and the solution structures of SH3 domains of phospholipase C (PLC-y) and phosphatidylinositol 3-kinase p85 alpha-subunit, have been determined [, , ]. In spite of relatively limited sequence similarity, their overall structures are similar. The domains belong to the alpha+beta structural class, with 5 to 8 beta-strands forming 2 tightly-packed, anti-parallel beta-sheets arranged in a barrel-like structure, and intervening loops sometimes forming helices. Conserved aliphatic and aromatic residues form a hydrophobic core (A11, L23, A29, V34, W42, L52 and V59 in PLC-y []) and a hydrophobic pocket on the molecular surface (L12, F13, W53 and P55 in PLC-y). The conserved core is believed to stabilise the fold, while the pocket is thought to serve as a binding site for target proteins. Conserved carboxylic amino acids located in the loops, on the periphery of the pocket (D14 and E22), may be involved in protein-protein interactions via proline-rich regions. The N- and C-termini are packed in close proximity, indicating that they are independent structural modules.; GO: 0005515 protein binding; PDB: 1UHF_A 1W1F_A 1WA7_A 1SEM_A 1KFZ_A 2SEM_B 1K76_A 3SEM_B 1X2Q_A 2J06_B ....

>KOG2199|consensus

Probab=99.55  E-value=9.7e-16  Score=111.68  Aligned_cols=54  Identities=17%  Similarity=0.507  Sum_probs=49.0

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .|||||||++...+  ||+|++||+|+|++..+.+||+|++ .+..|+||+|||+..
T Consensus       217 kVRALYDFeAaE~n--ELsFkaGdIItVLd~s~~~WWKG~~-~~~~GlFPsnfVT~~  270 (462)
T KOG2199|consen  217 KVRALYDFEAAEDN--ELSFKAGDIITVLDDSDPNWWKGEN-HRGIGLFPSNFVTAD  270 (462)
T ss_pred             hhhhhhcccccCCC--ccceecCcEEEEcccCCcchhcccc-CCcccccchhhhhhh
Confidence            38999999988766  9999999999999999999999997 667899999999854

>smart00326 SH3 Src homology 3 domains

Probab=99.51  E-value=8.9e-14  Score=75.70  Aligned_cols=55  Identities=25%  Similarity=0.601  Sum_probs=49.2

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      ..++|+|+|.+...+  +|+|.+||.+.++...+.+||.+++..++.|+||++|++.
T Consensus         3 ~~~~a~~~~~~~~~~--~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~~   57 (58)
T smart00326        3 PQVRALYDYTAQDPD--ELSFKKGDIITVLEKSDDGWWKGRLGRGKEGLFPSNYVEE   57 (58)
T ss_pred             cEEEEeeeeCCCCCC--CCCCCCCCEEEEEEcCCCCeEEEEeCCCCEEEEchHHEEE
Confidence            467999999987666  9999999999999998889999998668999999999975

Src homology 3 (SH3) domains bind to target proteins through sequences containing proline and hydrophobic amino acids. Pro-containing polypeptides may bind to SH3 domains in 2 different binding orientations.

>cd00174 SH3 Src homology 3 domains; SH3 domains bind to proline-rich ligands with moderate affinity and selectivity, preferentially to PxxP motifs; they play a role in the regulation of enzymes by intramolecular interactions, changing the subcellular localization of signal pathway components and mediate multiprotein complex assemblies

Probab=99.49  E-value=1.4e-13  Score=74.13  Aligned_cols=52  Identities=29%  Similarity=0.662  Sum_probs=46.9

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceE
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE   61 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~   61 (101)
                      ++|+|+|.+..++  +|+|.+||.+.++...+.+||.+++..++.|+||.+|++
T Consensus         2 ~~a~~~~~~~~~~--~l~~~~Gd~v~v~~~~~~~w~~~~~~~~~~G~vP~~~v~   53 (54)
T cd00174           2 VRALYDYDARDPD--ELSFKKGDIIEVLEKSDDGWWEGRLLGGKRGLFPSNYVE   53 (54)
T ss_pred             EEEEEeeCCCCCC--CCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEccccCc
Confidence            6899999988776  999999999999999778999999866699999999985

>KOG1118|consensus

Probab=99.47  E-value=2.4e-14  Score=101.68  Aligned_cols=61  Identities=25%  Similarity=0.534  Sum_probs=54.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccccC
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS   67 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~   67 (101)
                      ...+|+|+|||++.+.+  ||.|++||+|.|++..|++||.|+. .|..|+||.|||+.+.++.
T Consensus       305 ~~p~cralYdFepenEg--EL~fkeGDlI~l~~QIdenWyeG~~-~g~sG~FPvnYv~vlvpl~  365 (366)
T KOG1118|consen  305 DQPCCRALYDFEPENEG--ELDFKEGDLITLTNQIDENWYEGEK-HGESGMFPVNYVEVLVPLP  365 (366)
T ss_pred             cchhheeeeccCCCCCC--ccCcccCceeeehhhcCcchhhhee-cCccCccccceeEEeccCC
Confidence            34579999999998777  9999999999999999999999997 8889999999999887643

>KOG2070|consensus

Probab=99.47  E-value=8e-14  Score=104.19  Aligned_cols=58  Identities=19%  Similarity=0.513  Sum_probs=53.1

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      .+..|+|.|.|.++..|  ||+|.+||+|+|.+..+.+||.|.. +|+.||||+|||.++.
T Consensus        16 ~pLvvrAkf~F~gsNnD--ELsf~KgDvItVTq~eeGGWWEGTl-ng~TGWFPsnYV~eik   73 (661)
T KOG2070|consen   16 NPLVVRAKFNFQGSNND--ELSFSKGDVITVTQVEEGGWWEGTL-NGRTGWFPSNYVREIK   73 (661)
T ss_pred             CceEEEEEeecccCCCc--eeccccCCEEEEEEeccCcceeccc-cCccCccchHHHHHHh
Confidence            35578999999988777  9999999999999999999999986 9999999999999887

>KOG1029|consensus

Probab=99.43  E-value=7.1e-14  Score=108.67  Aligned_cols=57  Identities=23%  Similarity=0.587  Sum_probs=51.9

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +.|.|+|||.++.+|  ||+|.+||+|.|+++++++||.|.. +|..|+||+|||....+
T Consensus      1054 ~qviamYdY~AqndD--ELsF~kgdiI~VlnkdepeWW~Ge~-ng~sGLFPSNYV~k~tt 1110 (1118)
T KOG1029|consen 1054 CQVIAMYDYEAQNDD--ELSFKKGDIINVLNKDEPEWWSGER-NGKSGLFPSNYVQKQTT 1110 (1118)
T ss_pred             ceeEEeeccccCCcc--cccccCCCEEEecCCCChhhhcccc-cCccccCcccccccccc
Confidence            457899999999888  9999999999999999999999997 89999999999965443

>KOG4226|consensus

Probab=99.40  E-value=5.7e-13  Score=93.80  Aligned_cols=57  Identities=30%  Similarity=0.645  Sum_probs=51.2

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .|.|||+|+...+.  ||+|.+||.+.|+++.  |++||++++..|..|+||.|||.++..
T Consensus       193 vVvaLYsFsssnde--ELsFeKGerleivd~Pe~DPdWwkarn~~G~vGLVPrNYv~vl~d  251 (379)
T KOG4226|consen  193 VVVALYSFSSSNDE--ELSFEKGERLEIVDKPENDPDWWKARNARGQVGLVPRNYVVVLSD  251 (379)
T ss_pred             EEEEEecccCCChh--hcccccCceeEeccCCCCCchHHhhcccCCccceeecceEEEecc
Confidence            47899999988777  9999999999999974  779999999999999999999998653

>KOG4792|consensus

Probab=99.28  E-value=9.1e-13  Score=90.60  Aligned_cols=62  Identities=29%  Similarity=0.603  Sum_probs=54.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccccC
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS   67 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~   67 (101)
                      ...+++++|||.+...+  +|.|++|+++.|+++....||.+++..|+.|+||.+||+.....+
T Consensus       123 ~~~~vr~~fdF~G~dee--DLPFkkGeiL~I~~K~eeqWW~Arns~Gk~GmIPvpYVe~~~~~~  184 (293)
T KOG4792|consen  123 EAEYVRALFDFNGNDEE--DLPFKKGEILRIRDKPEEQWWNARNSEGKRGMIPVPYVEKYRPAS  184 (293)
T ss_pred             hhhheeeeeccCCCccc--cCCcccCcEEEEecCcHHHhhhhhccCCcccceechHHHhhhhhh
Confidence            45678999999876555  999999999999999989999999999999999999999866544

>KOG0162|consensus

Probab=99.26  E-value=3.2e-12  Score=99.35  Aligned_cols=55  Identities=24%  Similarity=0.520  Sum_probs=50.2

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ..|.|+|+|.++..+  ||+|++||+|.|+.++.++||.++. +|++||||.+||+++
T Consensus      1052 p~~~A~Y~y~gq~~d--Els~~~~diIei~~edpSGWw~gk~-~~keG~~P~~Yv~~~ 1106 (1106)
T KOG0162|consen 1052 PVCEALYDYPGQDVD--ELSFKKGDIIEIMREDPSGWWLGKL-NGKEGLFPGNYVTEY 1106 (1106)
T ss_pred             cceeeeccCCCCCcc--cccccCCCEEEEeccCCCcchhhcc-CCccccccccccccC
Confidence            468999999998666  9999999999999999999999995 899999999999753

>KOG4225|consensus

Probab=99.25  E-value=6.2e-12  Score=92.84  Aligned_cols=55  Identities=25%  Similarity=0.629  Sum_probs=51.5

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ++|+|+|.++...  ||+|.+||+|.|+++.|.+|+.|+. +|+.|+||+|||+.+..
T Consensus       233 aralf~F~~qt~k--EL~~~kGDIVyI~rkvD~nWyeGEh-hGr~GifP~sYvE~~~~  287 (489)
T KOG4225|consen  233 ARALFDFEAQTPK--ELPFNKGDIVYILRKVDQNWYEGEH-HGRVGIFPASYVEILTP  287 (489)
T ss_pred             hhheeccccCCcc--ccccCCCCEEEEEeeccCceeeeee-cceecceechheeecCc
Confidence            6999999999777  9999999999999999999999998 99999999999998765

>KOG2856|consensus

Probab=99.15  E-value=8.3e-12  Score=90.75  Aligned_cols=55  Identities=27%  Similarity=0.508  Sum_probs=49.1

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCC-CceEEEcCCCcEEEEcCCceEe
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~-~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      +.|+|||||.++..+  ||+|++||.|..+...|. +|.+|+...|+.|++|+|||+-
T Consensus       415 v~vraLYDY~gqE~D--ElsfkaGd~l~kl~eeDeqGWC~Grl~~G~vGLyPAnYVe~  470 (472)
T KOG2856|consen  415 VRVRALYDYAGQEGD--ELSFKAGDELEKLEEEDEQGWCKGRLDSGRVGLYPANYVEC  470 (472)
T ss_pred             eeEEeeeccCccccc--chhhccccHhhhcCCccccccccccccCCcccccchhhhhc
Confidence            568999999998888  999999999998887654 8999998779999999999974

>KOG4226|consensus

Probab=99.13  E-value=7.4e-11  Score=83.25  Aligned_cols=55  Identities=18%  Similarity=0.480  Sum_probs=49.5

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +.+.|.|.+...+  ||++.+|..+.|+++..++||+|.. +|+.||||+|||++...
T Consensus       110 AvVKf~Y~a~~eD--ELsLtKGtrv~vmEKssDGWWrG~~-ng~VGWFPSNYv~E~~d  164 (379)
T KOG4226|consen  110 AVVKFNYVAERED--ELSLTKGTRVTVMEKSSDGWWRGSY-NGQVGWFPSNYVTEEVD  164 (379)
T ss_pred             eEEEEeecccccc--ccccccCcEEEEEEeccCcceeccc-CCeeccccccceehhcc
Confidence            5667889888778  9999999999999999999999987 89999999999997544

>KOG0515|consensus

Probab=99.09  E-value=4.8e-11  Score=90.31  Aligned_cols=55  Identities=27%  Similarity=0.727  Sum_probs=48.5

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCC---CceEEEcCCCcEEEEcCCceEeccc
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK---DWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~---~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +-|||||+++..|  ||+|.+||.++||++++.   +||+++. +|++||||.||+-.++.
T Consensus       686 vYAlwdYeaqf~D--ELsf~eGd~lTvirr~d~~eteWWwa~l-ng~eGyVPRnylgLyPr  743 (752)
T KOG0515|consen  686 VYALWDYEAQFED--ELSFDEGDELTVIRRDDEVETEWWWARL-NGEEGYVPRNYLGLYPR  743 (752)
T ss_pred             eEEeecccccccc--cccccCCceeEEEecCCcchhhhhhHhh-cCcccccchhhhhcCcc
Confidence            5699999999888  999999999999998643   7999995 99999999999977654

>KOG1264|consensus

Probab=99.08  E-value=3.9e-11  Score=94.30  Aligned_cols=61  Identities=25%  Similarity=0.495  Sum_probs=54.7

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +.++.|+|||+|.++.+|  ||+|.+|-+|+.+.++..+||+|...+...+|||+|||+++.+
T Consensus       772 ~~~vt~kAL~~Yka~r~D--ELSFpk~aiItnv~keeg~wWrGdYGg~iq~wfPsnyVeei~~  832 (1267)
T KOG1264|consen  772 MPQVTVKALYDYKAKRSD--ELSFPKGAIITNVSKEEGGWWRGDYGGRIQQWFPSNYVEEIST  832 (1267)
T ss_pred             ccchhhhhhhccccCCcc--cccccccceeEeeeccCCceeecccccceeeeccHHHhhhhcc
Confidence            556789999999999888  9999999999999999889999998445789999999998865

>KOG2996|consensus

Probab=99.03  E-value=1.8e-10  Score=88.03  Aligned_cols=54  Identities=24%  Similarity=0.512  Sum_probs=44.5

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ++|-|||-+...  .+|||++||++.|+++.  |.+||+|+. +|+.||||++||++..
T Consensus       808 AvarYdf~ard~--~eLSlk~GDvV~i~~k~g~d~GWWkGev-ngrvGwFPstYVee~~  863 (865)
T KOG2996|consen  808 AVARYDFCARDM--RELSLKEGDVVKIYDKVGEDQGWWKGEV-NGRVGWFPSTYVEEDD  863 (865)
T ss_pred             eeeccccCCCch--hhcccccCCEEEEehhccccCceeccee-cCcccccccccccccC
Confidence            455666765544  49999999999999985  568999997 9999999999998753

>KOG3875|consensus

Probab=98.97  E-value=5e-11  Score=85.03  Aligned_cols=58  Identities=21%  Similarity=0.406  Sum_probs=48.8

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcC-----CCCceEEEcC-CCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-----~~~Ww~~~~~-~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|||.+..+.  ||+|++||.+.|..++     +++||..+.. .+..|+||.|||+.+..
T Consensus       269 ~~arA~YdF~a~np~--ElSlk~Gdml~ia~K~dq~~~~~~gW~lat~dg~~tG~iP~NYvkIi~r  332 (362)
T KOG3875|consen  269 EFARALYDFVARNPV--ELSLKKGDMLAIASKEDQQGVRCEGWLLATRDGGTTGLIPINYVKIIGR  332 (362)
T ss_pred             HHHHHHhhhhcCCHH--HhhhhcCchhhcccccccCCCCCcceeeeeccCCeeeeeehhhhhhhhc
Confidence            468999999887664  9999999999998775     3469999886 45789999999998765

>KOG1029|consensus

Probab=98.93  E-value=8.8e-10  Score=86.34  Aligned_cols=59  Identities=22%  Similarity=0.482  Sum_probs=49.4

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEeccccC
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKKLS   67 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~   67 (101)
                      +.++|||.|++.+.+  |++|.+||+|.|-.+.  .++|.-|.. +|+.||||.|||+.++..+
T Consensus       694 vkyrAly~FeaRs~d--Eisf~pGDII~V~esq~aEPGWlaGel-~gktGWFPenyvEki~~~e  754 (1118)
T KOG1029|consen  694 VKYRALYPFEARSHD--EISFEPGDIIIVFESQAAEPGWLAGEL-RGKTGWFPENYVEKIPAVE  754 (1118)
T ss_pred             EEEeeecccccCCcc--cccccCCCEEEEehhccCCccccccee-ccccCcCcHHHHhhcccCC
Confidence            468999999999988  9999999999887664  446666654 8999999999999877554

>KOG4348|consensus

Probab=98.92  E-value=3.3e-10  Score=84.20  Aligned_cols=61  Identities=20%  Similarity=0.401  Sum_probs=54.7

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccccCCC
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNG   69 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~~~   69 (101)
                      ..|++.|.|.++.++  ||.|+.||+|.|+....++||.|.. +|..|+||+|||.+++..+..
T Consensus       101 r~c~v~f~Y~pqndD--ELelkVGDiIeli~eVEeGWw~G~L-ngk~GmFPsNFVkel~~~sde  161 (627)
T KOG4348|consen  101 RICVVTFAYSPQNDD--ELELKVGDIIELISEVEEGWWKGKL-NGKVGMFPSNFVKELPTPSDE  161 (627)
T ss_pred             eeEEEEEeecCCCCc--eeeeeeccHHHhhhHhhhhhhhcee-cCcccccchhhceecCCCCcc
Confidence            358999999999888  9999999999999998899999986 899999999999998765543

>KOG4348|consensus

Probab=98.91  E-value=8.4e-10  Score=82.06  Aligned_cols=55  Identities=27%  Similarity=0.573  Sum_probs=50.2

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ||+++|.|+++.++  ||.|++||++.+|.++  +-+||.|+. +|+.|+||-|||+.+.
T Consensus       263 ycrv~F~Ye~qndD--ELt~KEgdil~lItK~cgdaGWweGEL-nGk~GvFPDNFv~lv~  319 (627)
T KOG4348|consen  263 YCRVKFVYEPQNDD--ELTLKEGDILILITKNCGDAGWWEGEL-NGKKGVFPDNFVELVQ  319 (627)
T ss_pred             heeeeeeecCCCcc--ceeeccccEEEEecccccccceeeeee-cCccccCCchhhhhcC
Confidence            79999999999888  9999999999999986  558999996 9999999999998765

>KOG2546|consensus

Probab=98.83  E-value=1.8e-09  Score=79.77  Aligned_cols=54  Identities=28%  Similarity=0.632  Sum_probs=49.1

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ++++|||.+...+  ||+|.+|-+|+|+++.|++||.+-. +|..|+||.|||+.+.
T Consensus       426 Vv~iydy~~~Kdd--eLsf~E~ailyv~kknddgw~EgV~-~~VTglFpgnyve~~~  479 (483)
T KOG2546|consen  426 VVAIYDYTADKDD--ELSFAEGAILYVLKKNDDGWYEGVQ-DGVTGLFPGNYVEPLK  479 (483)
T ss_pred             HHhhccccccccc--ccccccccEEEEEEecCCcchhhee-cCcceeccCccccccc
Confidence            6789999988777  9999999999999999999999976 8889999999998764

>KOG3655|consensus

Probab=98.83  E-value=9.7e-10  Score=81.98  Aligned_cols=56  Identities=25%  Similarity=0.547  Sum_probs=50.0

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ..++|+|||++-.+.  |++|.++++|.+|+..+.+||.+.-.+|..|+||+|||+.+
T Consensus       428 q~A~A~~dyqAAddt--Eisf~p~d~it~Id~vdegww~g~~pdG~~glfPaNyV~li  483 (484)
T KOG3655|consen  428 QTARALYDYQAADDT--EISFDPPDAITLIDQVDEGWWTGQGPDGEVGLFPANYVELI  483 (484)
T ss_pred             CCccccccccccCCc--ccccCCccccccccccCCccccccCCCCCcCcccccccccC
Confidence            357899999876555  99999999999999999999999988899999999999764

>KOG4225|consensus

Probab=98.81  E-value=4.1e-09  Score=78.15  Aligned_cols=56  Identities=21%  Similarity=0.479  Sum_probs=49.4

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEe
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV   62 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~   62 (101)
                      .+-++|||.|.++..+  ||-|+.||+|.|+++-|++|.-|.. ..|.-|.||.|||+.
T Consensus       432 ~l~yrAly~Y~pqned--eLEl~egDii~VmeKcddgWfvGts~rtg~fGtFPgnyV~~  488 (489)
T KOG4225|consen  432 PLKYRALYSYRPQNED--ELELREGDIIDVMEKCDDGWFVGTSRRTGKFGTFPGNYVKR  488 (489)
T ss_pred             cccceeccccCCCCch--hheeccCCEEeeeecccCcceeccceecccccccCcccccc
Confidence            3347999999999888  9999999999999999999999844 368899999999974

>KOG1843|consensus

Probab=98.79  E-value=3.8e-09  Score=77.84  Aligned_cols=54  Identities=28%  Similarity=0.543  Sum_probs=47.5

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCC--CceEEEcCCCcEEEEcCCceEe
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK--DWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~--~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      ..+.|+|+|.....+  +|+|++||+|+++++.+.  +||.++. ++.+|+||+|||+.
T Consensus       417 n~a~a~ysfage~~G--Dl~f~kgDii~il~ks~s~~dwwtgr~-~~~egifPanyv~~  472 (473)
T KOG1843|consen  417 NIATALYSFAGEQPG--DLSFQKGDIITILKKSDSANDWWTGRG-NGYEGIFPANYVSL  472 (473)
T ss_pred             ceeeeeehhccCCCC--CcccccCceEEEecCCcchhhHHHhhc-cccccccccceecc
Confidence            368999999887666  999999999999998754  7999987 89999999999974

>KOG4278|consensus

Probab=98.70  E-value=1.4e-08  Score=79.22  Aligned_cols=57  Identities=30%  Similarity=0.550  Sum_probs=48.7

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      ..+|||||.+.+++  .|++.+||.+.|+.-. +.+|..++..+|+ ||||+||+..+...
T Consensus        92 LFVALYDFvasGdn--tLSitKGeklRvLGYN~NgEWcEartKNGq-GWVPSNyItPvNSL  149 (1157)
T KOG4278|consen   92 LFVALYDFVASGDN--TLSITKGEKLRVLGYNKNGEWCEARTKNGQ-GWVPSNYITPVNSL  149 (1157)
T ss_pred             eeEeeeeeeccccc--eeeeecCceEEEeeecCCCcceeecccCCC-ccccccccccccch
Confidence            56899999998777  9999999999999865 6689999986666 99999999876543

>KOG3601|consensus

Probab=98.65  E-value=1.5e-08  Score=68.99  Aligned_cols=56  Identities=21%  Similarity=0.466  Sum_probs=49.7

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ..++.|+|+|.+..++  +|.|++|+.+.|++..+..||.|.. .|+.|+||++|+...
T Consensus       163 ~~yqQa~~df~~~pp~--ql~f~~gq~~~v~~~ss~~ww~Gs~-lg~agiFpagyv~p~  218 (222)
T KOG3601|consen  163 NYYQQALYDFQPQPPG--QLAFRRGQQIQVLDSSSPFWWFGSK-LGRAGIFPAGYVAPS  218 (222)
T ss_pred             chhhhhcCCCCCCCch--hhccccCCcceeecCCCcchhhccc-cCceeeecCcccccc
Confidence            3467999999988766  9999999999999999999999987 789999999999753

>KOG0197|consensus

Probab=98.53  E-value=3.5e-08  Score=74.29  Aligned_cols=56  Identities=30%  Similarity=0.657  Sum_probs=48.8

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCE-EEEEEcCCCCceEEEcC-CCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEK-LFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~-l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~   63 (101)
                      ..+.|+|+|.+..+.  +|+|.+|+. ..+++..+..||+++.. .+.+|++|+|||...
T Consensus        12 ~~~valyd~~s~~~~--dLsf~~Gd~~~~~~~~~~~~Ww~ar~~~~~~~g~ip~N~v~~~   69 (468)
T KOG0197|consen   12 TIVVALYDYASRTPE--DLSFRKGDVVLILLETTNGDWWRARSLQLGQEGYIPSNYVARN   69 (468)
T ss_pred             ceEEEeccccCCCcc--ccccccCceEEEeeccCChhHHHHHHhhcCCCCcCcCceeecc
Confidence            368999999988766  999999999 78888888899998875 678999999999964

>KOG1702|consensus

Probab=98.45  E-value=1.6e-07  Score=64.06  Aligned_cols=55  Identities=22%  Similarity=0.463  Sum_probs=47.4

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEe
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV   62 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~   62 (101)
                      -..+|+|||.++..+  +++|.-||-|.-+...+++|..+.. ..|..|..|+||++.
T Consensus       208 ktyra~ydysaqded--evsF~dgd~ivnvq~iddGWmygtv~rtg~tGmlpaNyie~  263 (264)
T KOG1702|consen  208 KTYRAFYDYSAQDED--EVSFVDGDYIVNVQSIDDGWMYGTVVRTGWTGMLPANYIEF  263 (264)
T ss_pred             ccchhhccCcccCcc--eeEEecCCeEEEEEeccCCceeeEEEeccccCCCchhheee
Confidence            457899999888666  9999999999989988888988765 467899999999975

>KOG3557|consensus

Probab=98.42  E-value=6.8e-08  Score=74.56  Aligned_cols=63  Identities=25%  Similarity=0.544  Sum_probs=53.4

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccccCCC
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNG   69 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~~~   69 (101)
                      +..+++++|||.+....  ||++.+||++.|+... ..||++++..|+.||||+|.+..+.+....
T Consensus       499 ~~k~~~~~Ydf~arNs~--ELsV~k~E~LEvl~d~-R~WW~~kn~~G~~GyvP~nIL~~~~~~~~~  561 (721)
T KOG3557|consen  499 GKKWVLVLYDFQARNSS--ELSVKKGEVLEVLDDG-RKWWKVKNGHGRAGYVPSNILAPLQPEHTG  561 (721)
T ss_pred             cceeeeeehhhhcccch--hhhhhhhhhhhhhhcc-ccceeccCccCCCCCcchhhhccCCCcccc
Confidence            44578999999988776  9999999999999864 579999998899999999999887664444

>KOG0609|consensus

Probab=98.25  E-value=3.1e-07  Score=69.80  Aligned_cols=58  Identities=24%  Similarity=0.534  Sum_probs=47.7

Q ss_pred             EEEEEEeccCCCCCC-----CCCccccCCCEEEEEEcCCCCceEEEcCC----CcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKD-----GKYVRIQEGEKLFLIKKTNKDWWQVIRSS----GKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~-----~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~----g~~G~vP~~yv~~~   63 (101)
                      .+++|+|||++..++     ...|+|++||++.|++++|..||+++...    +..|++|+....+.
T Consensus       215 ~~vra~FdYdP~~D~~IPCkEagl~F~~GDILqIv~qdD~nWWQA~~~~~~~~~~AGLiPS~~~qer  281 (542)
T KOG0609|consen  215 VFVRALFDYDPKEDDLIPCKEAGLPFQRGDILQIVSQDDPNWWQARRVGDPFGGLAGLIPSKELQER  281 (542)
T ss_pred             eeehhhcCcCcccCCcccchhcCCcccccceeeeccCCCcchhhhhcccCccccccccccCHHHHHH
Confidence            578999999987643     25789999999999999999999998743    46799999776653

>KOG3523|consensus

Probab=98.19  E-value=1.3e-07  Score=72.64  Aligned_cols=57  Identities=19%  Similarity=0.395  Sum_probs=51.0

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ++.+...|.+..+|  +|++..+|++.|+++.+++|..|.+ .+|..||||.+|++++..
T Consensus       610 Qv~~~~sy~a~q~D--el~Le~~Dvv~v~~k~~DGWl~GeRl~Dge~GWFP~~~veeI~~  667 (695)
T KOG3523|consen  610 QVQCVHSYKAKQPD--ELTLELADVVNVLQKTPDGWLEGERLRDGERGWFPSSYVEEITN  667 (695)
T ss_pred             hhheeeccccCCCc--eeeeehhhhhhhhhcCCCccccccccccCccCcchHHHHHHhcC
Confidence            46778889998888  9999999999999999999999988 468899999999998765

>KOG2528|consensus

Probab=98.19  E-value=5.4e-07  Score=67.24  Aligned_cols=57  Identities=32%  Similarity=0.480  Sum_probs=50.1

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+||+|||...+.+  +|++..||++.+...+ ..+||.+.+..|..|+||+.||+....
T Consensus         4 k~RamyDf~~E~~s--Elsi~~~evl~i~~e~~~~GwLeg~Nsrge~GlfPa~yVeV~~~   61 (490)
T KOG2528|consen    4 KARAMYDFQSEGHS--ELSIWEGEVLSITSEDVIEGWLEGSNSRGERGLFPASYVEVTRL   61 (490)
T ss_pred             chhhhcchhhcccc--cccccccceeeecCcccccccccCCCccCccCCCcccceeeecc
Confidence            46899999877555  9999999999999886 568999999999999999999998764

>KOG3632|consensus

Probab=97.92  E-value=1.2e-05  Score=65.15  Aligned_cols=59  Identities=14%  Similarity=0.224  Sum_probs=47.9

Q ss_pred             EEEEEeccCCCCC------CCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           7 TLKVLYDFDYSTK------DGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         7 ~~~aly~f~~~~~------~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      ..+|||||++...      ...||+|++|++|.|+..- .+++++++. +|+.|+||+|+|.++...
T Consensus      1140 ifVAlfDYDpl~MSpNpDAaEeELpFregqIikV~GDkDadgFY~GE~-ngr~GlIPcNmvae~~vd 1205 (1335)
T KOG3632|consen 1140 IFVALFDYDPLQMSPNPDAAEEELPFREGQIIKVLGDKDADGFYMGEL-NGRRGLIPCNMVAEQPVD 1205 (1335)
T ss_pred             eeEeeeccCccccCCCCChhhhccccccCcEEEEeccccccceeeccc-ccccccccccccccccCC
Confidence            3689999998542      2359999999999999864 457888886 899999999999987653

>KOG2222|consensus

Probab=97.80  E-value=2.3e-06  Score=65.05  Aligned_cols=55  Identities=22%  Similarity=0.399  Sum_probs=47.7

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      .++||.||.-...+  ||.|+++|+++|+..-+...|-|+. +|-.||||+.||+.+.
T Consensus       550 rakal~df~r~ddd--elgfrkndiitiisekdehcwvgel-nglrgwfpakfvelld  604 (848)
T KOG2222|consen  550 RAKALHDFAREDDD--ELGFRKNDIITIISEKDEHCWVGEL-NGLRGWFPAKFVELLD  604 (848)
T ss_pred             HHHHHhhhhhcccc--ccccccccEEEEeecCCcceeeecc-ccccccchHHHHHHHH
Confidence            46789999766555  9999999999999998899999986 8989999999998654

>KOG3601|consensus

Probab=97.76  E-value=2.7e-06  Score=58.12  Aligned_cols=52  Identities=15%  Similarity=0.379  Sum_probs=44.3

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEe
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      +.++++|.++..+  ||+|.+|+.+.+++.. +.+|.+... .|.+|++|.||+..
T Consensus         3 a~a~n~f~a~i~d--ELsFlkg~~lk~l~~~d~~nw~~ael-~g~~g~~P~Nai~~   55 (222)
T KOG3601|consen    3 AVAKNDFLAGIRD--ELSFLKGDNLKILNMEDDINWYKAEL-DGPEGFIPKNAIRM   55 (222)
T ss_pred             hhhhhhhhhcCcc--cceeecCCceEecchHHhhhhhhHhh-cCccccCccccccc
Confidence            4578999888888  9999999999998875 447888876 88999999999954

>PF14603 hSH3: Helically-extended SH3 domain; PDB: 1RI9_A

Probab=97.73  E-value=4.9e-05  Score=45.27  Aligned_cols=44  Identities=32%  Similarity=0.246  Sum_probs=32.0

Q ss_pred             CCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758          20 DGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus        20 ~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      +..+|++++||.+.||+..+.+-|.+|+..|+-||||.+++...
T Consensus        29 G~kDLpi~~GE~LeVI~~t~~~kvlCRN~~GKYGYV~~~~L~~~   72 (89)
T PF14603_consen   29 GGKDLPIKPGEILEVIQFTDDNKVLCRNSEGKYGYVLRSHLLPL   72 (89)
T ss_dssp             -TTB----TT-B-EEEEESSSSEEEEEETTTEEEEEEGGGS---
T ss_pred             CcccCCcCCCCEEEEEEeCCCCeEEEeCCCCceeEEEHHHccCC
Confidence            44699999999999999999999999999999999999998543

>KOG4773|consensus

Probab=97.72  E-value=4e-06  Score=61.01  Aligned_cols=55  Identities=24%  Similarity=0.390  Sum_probs=48.2

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..|+++|..+...  ||.|.+|+++.++.+++..||.|+. .+..||+|.+|+..+..
T Consensus       178 ~~a~~df~gns~~--EL~l~agdV~~~~~r~ek~W~~gk~-R~~~g~yp~sF~~~ld~  232 (386)
T KOG4773|consen  178 AEASFDFPGNSKL--ELNLVAGDVEFLLSRDEKYWLLGKV-RGLTGYYPDSFVKQLDD  232 (386)
T ss_pred             HHhhccCCCCccc--eeeeehhhHHHHHhhcccceeeeee-ccccccccHHhhhhhcc
Confidence            4678899877666  9999999999999999999999987 78889999999987654

>KOG3775|consensus

Probab=97.67  E-value=2.2e-05  Score=57.93  Aligned_cols=62  Identities=16%  Similarity=0.303  Sum_probs=52.6

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEecccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~~~~   66 (101)
                      +++.+-++++.|.+..++  ||-+..||.+.|-...++.|..+.+. .|+.|.||+.|+.++...
T Consensus       260 ~qe~THR~~~rFvPRHpD--ELeLEIgDav~Ve~eadD~W~~G~NlRTG~~GIFPA~ya~evd~~  322 (482)
T KOG3775|consen  260 EQEQTHRAVFRFVPRHPD--ELELEIGDAVLVEAEADDFWFEGFNLRTGERGIFPAFYAHEVDGP  322 (482)
T ss_pred             hhchhhhhhhhccCCCcc--eeeeecCCeeEeeecccchhhccccccccccccccceeEEecCCc
Confidence            344456889999999888  99999999999988888899999884 578999999999987653

>KOG4575|consensus

Probab=97.61  E-value=7.6e-05  Score=58.28  Aligned_cols=56  Identities=14%  Similarity=0.435  Sum_probs=43.4

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEe
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEV   62 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~   62 (101)
                      .++++|+|.+.++..+  +|-|.+||++.+++-.+.-||-.... ....|+||+|||.-
T Consensus         8 p~~vrA~y~w~ge~eG--dl~f~egDlie~trI~dgkwwi~lhrNk~~~g~fpsNFvhc   64 (874)
T KOG4575|consen    8 PCMVRALYAWPGEREG--DLKFTEGDLIEQTRIEDGKWWILLHRNKDEDGLFPSNFVHC   64 (874)
T ss_pred             CceEEeeccCCCCccc--ccceecccceeEEeeccceeeeeeeecccccccCcccceee
Confidence            4578999999877666  99999999999988876545544433 34679999999953

>KOG3725|consensus

Probab=97.40  E-value=4.5e-05  Score=54.04  Aligned_cols=54  Identities=26%  Similarity=0.438  Sum_probs=45.2

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEe
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      -.++++|||++..+.  ||++-.+++|.|..-.  |.+|..+++ +++.|-+|..|++.
T Consensus       318 rkArVlyDYdAa~s~--ElslladeiitVyslpGMD~dwlmgEr-GnkkGKvPvtYlEL  373 (375)
T KOG3725|consen  318 RKARVLYDYDAALSQ--ELSLLADEIITVYSLPGMDADWLMGER-GNKKGKVPVTYLEL  373 (375)
T ss_pred             cceeeeecccccchh--hhhhhhcceEEEEecCCCChHHhhhhh-cCCCCCcchhHHHh
Confidence            357899999987555  9999999999988764  678999987 66789999999864

>KOG3771|consensus

Probab=97.33  E-value=0.00011  Score=55.34  Aligned_cols=51  Identities=14%  Similarity=0.117  Sum_probs=38.7

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCce
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYV   60 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv   60 (101)
                      .++++|+|.++..+  +|+|+.||+|.|+... ..+||.|+. .|..+-+|.+|+
T Consensus       402 ~v~a~~dy~a~~~d--eLsf~~gd~i~vi~s~~~~e~~eg~~-mg~ke~~~~~~~  453 (460)
T KOG3771|consen  402 KVKALHDYAAQDTD--ELSFEAGDVILVIPSDNPEEQDEGWL-MGVKESDWNGLF  453 (460)
T ss_pred             ceeccccccccccc--cccccCCCEEEEecCCCccchhhHHH-hhhcccccccce
Confidence            58999999999888  9999999999999865 347888876 443333344444

>PF08239 SH3_3: Bacterial SH3 domain; InterPro: IPR013247 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=97.18  E-value=0.00076  Score=36.26  Aligned_cols=39  Identities=26%  Similarity=0.568  Sum_probs=31.6

Q ss_pred             CccccCCCEEEEEEcCCCC-ceEEEcCCCcEEEEcCCceE
Q psy6758          23 YVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVE   61 (101)
Q Consensus        23 eLs~~~g~~l~vl~~~~~~-Ww~~~~~~g~~G~vP~~yv~   61 (101)
                      --.+..|+.+.++.....+ |++++..+|..|||+..|++
T Consensus        16 i~~l~~g~~v~v~~~~~~~~W~~V~~~~g~~GwV~~~~l~   55 (55)
T PF08239_consen   16 IGQLPKGEKVTVLGESGDGNWYKVRTYDGKTGWVSSSYLS   55 (55)
T ss_dssp             EEEEETTSEEEEEEEETT--EEEEEEETTEEEEEEGGCEE
T ss_pred             hEEEeCCCEEEEEEEcCCcEEEEEECcCCcEEEEEccccC
Confidence            3357899999999987554 99996668889999999985

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. A homologue of the SH3 domain has been found in a number of different bacterial proteins including glycyl-glycine endopeptidase, bacteriocin and some hypothetical proteins.; PDB: 3PVQ_B 3NPF_B 3H41_A 2KQ8_A 2KRS_A 2KYB_A 2KT8_A.

>KOG4792|consensus

Probab=97.17  E-value=0.00085  Score=46.81  Aligned_cols=59  Identities=17%  Similarity=0.134  Sum_probs=47.9

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++++++-.+..=+...|.++.||++.|.+..-.+-|.++. +|+.|.||..||.....
T Consensus       228 a~Arv~q~RVPnAYDkTaL~levGdiVkVTk~ninGqwegEl-nGk~G~fPfThvrf~d~  286 (293)
T KOG4792|consen  228 AYARVIQKRVPNAYDKTALALEVGDIVKVTKKNINGQWEGEL-NGKIGHFPFTHVRFTDV  286 (293)
T ss_pred             hheeeehhcCCCccChhhhhhhcCcEEEEEeeccCceeeeee-cCccccccceeEEeecc
Confidence            356777765555445569999999999999998778899997 99999999999987543

>KOG0199|consensus

Probab=97.14  E-value=0.001  Score=53.24  Aligned_cols=57  Identities=18%  Similarity=0.206  Sum_probs=44.2

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCC-CceEEEc-CCCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIR-SSGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~-~Ww~~~~-~~g~~G~vP~~yv~~~~   64 (101)
                      +...+++.||+  ...+  .|.|++||.|.||+.... -||++.+ .+++.|.||.+-|....
T Consensus       375 qp~~a~~~~d~--~ep~--aLh~~kgD~IvVIegs~a~y~WfgQn~Rn~kvG~Fprsvvt~a~  433 (1039)
T KOG0199|consen  375 QPAVARETYDS--IEPG--ALHLTKGDEIVVIEGSGAGYDWFGQNKRNQKVGTFPRSVVTAAT  433 (1039)
T ss_pred             CCceeeeeccc--cCCC--ceeeccCCeEEEEecCCccceeeccccccceecccCcceeeecc
Confidence            34456777777  4556  999999999999998754 5999976 35689999999887433

>KOG3565|consensus

Probab=97.04  E-value=0.00011  Score=57.83  Aligned_cols=56  Identities=32%  Similarity=0.565  Sum_probs=47.6

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEE-cCCCcEEEEcCCceEecc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVI-RSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~-~~~g~~G~vP~~yv~~~~   64 (101)
                      ++.|+|.|++.+++  ++++.+|+++.+++.+ +++|-+++ ..++..|++|.+|+....
T Consensus       580 ~~~a~~~~~~~s~~--~~si~~~~il~~ie~~~g~gwt~~r~~~~~~~g~~Ptsyl~~~~  637 (640)
T KOG3565|consen  580 TSKALYAFEGQSEG--TISIDPGEILQVIEEDKGDGWTRGRLEPNGEKGYVPTSYLDVTE  637 (640)
T ss_pred             ceecccCcCCCCCC--ccccCcchhHHHHhhcccCCCCCCCCCCCCcCCCCCcccccccc
Confidence            57899999988777  9999999999999987 56788888 357789999999998643

>KOG4429|consensus

Probab=97.03  E-value=0.00016  Score=52.05  Aligned_cols=54  Identities=15%  Similarity=0.033  Sum_probs=46.1

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .|.|+|+|.++.++  +|...+|++..+-.+...+||.++. .|.-|-||+.|+++.
T Consensus       365 lcdafYSfqarqdd--el~~e~gditif~Ekkeeg~~f~rl-~gd~~hf~Aa~iEea  418 (421)
T KOG4429|consen  365 LCDAFYSFQARQDD--ELGGEIGDITIFDEKKEEGPTFCRL-LGDFEHFHAAEIEEA  418 (421)
T ss_pred             Hhhhhhcccccccc--ccCCcccceeeecCcccCCCceeee-ccccCCCcHHHHHHh
Confidence            37899999998888  9999999998776677789999987 777888999998764

>KOG1451|consensus

Probab=96.92  E-value=0.00085  Score=52.29  Aligned_cols=52  Identities=21%  Similarity=0.381  Sum_probs=39.0

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEe
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      ++++|.-.+...  .+++|..|.++.-+..+ .++|..|+ .+|++|++|+|||+.
T Consensus       759 ~k~lyAc~a~h~--selsf~~gt~f~nv~~S~e~Gwl~Gt-LnGktglip~nyve~  811 (812)
T KOG1451|consen  759 VKTLYACTADHH--SELSFEPGTIFTNVYESNEDGWLVGT-LNGKTGLIPSNYVEP  811 (812)
T ss_pred             ccceeccCCCCc--ccccccCcceeeeecccCCCCceeee-cCCCcccCcccccCc
Confidence            455665554444  49999999999877655 44666666 599999999999975

>smart00287 SH3b Bacterial SH3 domain homologues

Probab=96.72  E-value=0.0053  Score=33.65  Aligned_cols=38  Identities=26%  Similarity=0.508  Sum_probs=31.2

Q ss_pred             CccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCce
Q psy6758          23 YVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV   60 (101)
Q Consensus        23 eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv   60 (101)
                      --.+..|+.+.++...+.+|.+++..+|..||+|..++
T Consensus        24 ~~~l~~g~~v~i~~~~~~~W~~v~~~~g~~Gwi~~~~~   61 (63)
T smart00287       24 IGTLKKGDKVKVLGVDGQDWAKITYGSGQRGYVPGYVV   61 (63)
T ss_pred             eEEecCCCEEEEEEccCCceEEEEcCCCCEEEEEeeee
Confidence            33578999999999865589999986789999987665

>PRK10884 SH3 domain-containing protein; Provisional

Probab=96.55  E-value=0.0034  Score=43.13  Aligned_cols=41  Identities=17%  Similarity=0.391  Sum_probs=34.9

Q ss_pred             cccCCCEEEEEEcCC-CCceEEEcCCCcEEEEcCCceEeccc
Q psy6758          25 RIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus        25 s~~~g~~l~vl~~~~-~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+..|+.+.|+...+ .+|.+++..+|.+|||+..|+...+.
T Consensus        49 ~l~~G~~v~vl~~~~~~~w~~Vr~~~G~~GWV~~~~Ls~~p~   90 (206)
T PRK10884         49 TLNAGEEVTLLQVNANTNYAQIRDSKGRTAWIPLKQLSTTPS   90 (206)
T ss_pred             EEcCCCEEEEEEEcCCCCEEEEEeCCCCEEeEEHHHhcCCcc
Confidence            577999999998764 58999998889999999999986544

>KOG0040|consensus

Probab=96.31  E-value=6e-05  Score=63.41  Aligned_cols=57  Identities=32%  Similarity=0.621  Sum_probs=48.3

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      .+.|+|+|...++.  +.+.++||+++++...+.+||.++. ..+.|++|+.||+.+.+.
T Consensus       970 ~v~alyd~q~kSpr--ev~mKkgDvltll~s~nkdwwkve~-~d~qg~vpa~yvk~~~~~ 1026 (2399)
T KOG0040|consen  970 CVLALYDYQEKSPR--EVTMKKGDVLTLLNSINKDWWKVEV-NDRQGFVPAAYVKRLDPG 1026 (2399)
T ss_pred             HHHHHHHHHhcCHH--HHHHhhhhHHHHHhhcccccccchh-hhhcCcchHHHHHHhccC
Confidence            35689999766554  9999999999999998999999987 667899999999986653

>KOG3632|consensus

Probab=95.95  E-value=0.013  Score=48.26  Aligned_cols=59  Identities=14%  Similarity=0.338  Sum_probs=47.0

Q ss_pred             EEEEEeccCC---CC-CCCCCccccCCCEEEEEEcCC-CCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDY---ST-KDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~---~~-~~~~eLs~~~g~~l~vl~~~~-~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+.|.|+|.+   .+ .-+.+|.+..|+.|+|....+ ++.+.+....|+.|++|+|||+.+..
T Consensus       449 ~~~arySynPFegpNenpeaelpltAg~yiYiyGdmdEdgfyegeL~dgrrglvPsnFVe~v~d  512 (1335)
T KOG3632|consen  449 PFTARYSYNPFEGPNENPEAELPLTAGYYIYIYGDMDEDGFYEGELRDGRRGLVPSNFVEVVTD  512 (1335)
T ss_pred             eEEEEEeccCCcCCCCCCccccccccceEEEEecCCCccccceeeeecccccCCCchheEEecc
Confidence            3678888766   21 224699999999999998764 46889998899999999999998654

>KOG3812|consensus

Probab=95.20  E-value=0.012  Score=43.39  Aligned_cols=50  Identities=22%  Similarity=0.480  Sum_probs=38.3

Q ss_pred             EEEEeccCCCCCC-----CCCccccCCCEEEEEEcCCCCceEEEc-CCC-cEEEEcC
Q psy6758           8 LKVLYDFDYSTKD-----GKYVRIQEGEKLFLIKKTNKDWWQVIR-SSG-KPFYVPA   57 (101)
Q Consensus         8 ~~aly~f~~~~~~-----~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g-~~G~vP~   57 (101)
                      |++.-+|++.-++     ...++|...|.|.|-.+-+.+||-|+. ..| ..||||+
T Consensus        61 V~tnv~Y~gslde~~Pv~g~aisF~~kDFlHIkeKynnDWWIGRlVkeg~e~gFiPs  117 (475)
T KOG3812|consen   61 VRTNVSYDGSLDEDSPVQGHAISFEAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPS  117 (475)
T ss_pred             EEeccccCCccCCCCCCCCceeeeccccceeehhhcccchhHHHHhhcCCccccccc
Confidence            5666677765433     257899999999999999999999986 234 6799997

>PF06347 SH3_4: Bacterial SH3 domain; InterPro: IPR010466 SH3 (src Homology-3) domains are small protein modules containing approximately 50 amino acid residues [, ]

Probab=94.11  E-value=0.12  Score=27.60  Aligned_cols=36  Identities=22%  Similarity=0.421  Sum_probs=29.1

Q ss_pred             CccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCce
Q psy6758          23 YVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV   60 (101)
Q Consensus        23 eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv   60 (101)
                      ...+.+|..+.|+.. ..+|.+++ .+|..|||+.+.+
T Consensus        18 v~~l~~g~~v~v~~~-~~~W~~V~-~~g~~GWv~~~~l   53 (55)
T PF06347_consen   18 VARLEPGVPVRVIEC-RGGWCKVR-ADGRTGWVHKSLL   53 (55)
T ss_pred             EEEECCCCEEEEEEc-cCCeEEEE-ECCeEEeEEeeec
Confidence            456778899888855 46899999 6999999998765

They are found in a great variety of intracellular or membrane-associated proteins [, , ] for example, in a variety of proteins with enzymatic activity, in adaptor proteins that lack catalytic sequences and in cytoskeletal proteins, such as fodrin and yeast actin binding protein ABP-1. The SH3 domain has a characteristic fold which consists of five or six beta-strands arranged as two tightly packed anti-parallel beta sheets. The linker regions may contain short helices []. The surface of the SH3-domain bears a flat, hydrophobic ligand-binding pocket which consists of three shallow grooves defined by conservative aromatic residues in which the ligand adopts an extended left-handed helical arrangement. The ligand binds with low affinity but this may be enhanced by multiple interactions. The region bound by the SH3 domain is in all cases proline-rich and contains PXXP as a core-conserved binding motif. The function of the SH3 domain is not well understood but they may mediate many diverse processes such as increasing local concentration of proteins, altering their subcellular location and mediating the assembly of large multiprotein complexes []. This family consists of several hypothetical bacterial proteins of unknown function, but that contain an SH-3 region.

>KOG2996|consensus

Probab=93.91  E-value=0.027  Score=44.27  Aligned_cols=44  Identities=25%  Similarity=0.413  Sum_probs=35.1

Q ss_pred             CCccccCCCEEEEEEcC-CCCceEEEcCC-CcEEEEcCCceEeccc
Q psy6758          22 KYVRIQEGEKLFLIKKT-NKDWWQVIRSS-GKPFYVPASYVEVYKK   65 (101)
Q Consensus        22 ~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~-g~~G~vP~~yv~~~~~   65 (101)
                      --|.+++|+++.++.-+ .+.||.+++.. +..|+||++-|...+.
T Consensus       625 P~l~~~~gdvlel~~~d~~s~~w~gr~~~sr~sg~fpss~vkp~~~  670 (865)
T KOG2996|consen  625 PRLVLQEGDVLELLKGDAESSWWEGRNHGSRESGNFPSSTVKPCPS  670 (865)
T ss_pred             CceEecCCceeehhcCCCCCcccccCCccCCccCCCCccccCcCCC
Confidence            36789999999988865 55799999844 4779999999986544

>PRK13914 invasion associated secreted endopeptidase; Provisional

Probab=93.76  E-value=0.15  Score=39.18  Aligned_cols=41  Identities=20%  Similarity=0.387  Sum_probs=34.1

Q ss_pred             ccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758          24 VRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus        24 Ls~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      =++..|+.+.|+.....+|++.+..+|++|||-..|+....
T Consensus       103 gsl~~G~~V~Vl~~~~ngW~kI~~~~GktGwV~~~YLs~~~  143 (481)
T PRK13914        103 TSIKGGTKVTVETTESNGWHKITYNDGKTGFVNGKYLTDKV  143 (481)
T ss_pred             eeecCCCEEEEeecccCCeEEEEcCCCCEEEEecccccCCC
Confidence            36789999999875556899999877999999999998643

>COG3103 SH3 domain protein [Signal transduction mechanisms]

Probab=93.67  E-value=0.14  Score=35.26  Aligned_cols=41  Identities=20%  Similarity=0.370  Sum_probs=35.2

Q ss_pred             cccCCCEEEEEEcCCC-CceEEEcCCCcEEEEcCCceEeccc
Q psy6758          25 RIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus        25 s~~~g~~l~vl~~~~~-~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ++++|+.+.|+...+. +|.+++...|..||||..++...+.
T Consensus        49 ~i~~Ge~vtvl~~~~~~~~~qI~~~~g~t~wi~~~~lt~e~s   90 (205)
T COG3103          49 SIKAGEKVTVLGTDGNTGYYQIRDSSGRTGWILSKNLTSEPS   90 (205)
T ss_pred             EecCCcEEEEEEEcCcccEEEEEecCCceEEEechhhccccc
Confidence            6789999999998755 7999999889999999988876544

>smart00743 Agenet Tudor-like domain present in plant sequences

Probab=86.99  E-value=1.1  Score=24.30  Aligned_cols=23  Identities=17%  Similarity=0.761  Sum_probs=19.8

Q ss_pred             cccCCCEEEEEEcCCCCceEEEc
Q psy6758          25 RIQEGEKLFLIKKTNKDWWQVIR   47 (101)
Q Consensus        25 s~~~g~~l~vl~~~~~~Ww~~~~   47 (101)
                      .|++|+.+.+..+.+..||.+..
T Consensus         2 ~~~~G~~Ve~~~~~~~~W~~a~V   24 (61)
T smart00743        2 DFKKGDRVEVFSKEEDSWWEAVV   24 (61)
T ss_pred             CcCCCCEEEEEECCCCEEEEEEE
Confidence            47899999999877788999875

Domain in plant sequences with possible chromatin-associated functions.

>PF11302 DUF3104: Protein of unknown function (DUF3104); InterPro: IPR021453 This family of proteins with unknown function appears to be restricted to Cyanobacteria

Probab=86.81  E-value=1  Score=26.17  Aligned_cols=25  Identities=20%  Similarity=0.732  Sum_probs=18.4

Q ss_pred             CccccCCCEEEEEEcC------CCCceEEEc
Q psy6758          23 YVRIQEGEKLFLIKKT------NKDWWQVIR   47 (101)
Q Consensus        23 eLs~~~g~~l~vl~~~------~~~Ww~~~~   47 (101)
                      =|+++.|+.+.|-...      +.+||.+..
T Consensus         3 FL~Vk~Gd~ViV~~~~~~~~~~~~dWWmg~V   33 (75)
T PF11302_consen    3 FLSVKPGDTVIVQDEQEVGQKQDKDWWMGQV   33 (75)
T ss_pred             ccccCCCCEEEEecCccccccCCCCcEEEEE
Confidence            4788999998665433      468999865

>KOG3705|consensus

Probab=86.25  E-value=0.97  Score=34.46  Aligned_cols=53  Identities=13%  Similarity=0.059  Sum_probs=36.2

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEe
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV   62 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~   62 (101)
                      +.++++-.++..+  |+.++.||++-|-..-=++.=+|.+ ..+++|+||+.=|.+
T Consensus       512 ~ivi~aH~prt~~--ei~l~vGD~vgvAGNHWdGySKG~Nr~t~~~GlfPSyKvre  565 (580)
T KOG3705|consen  512 VIVIEAHIPRTNK--EIDLKVGDKVGVAGNHWDGYSKGTNRQTYKEGLFPSYKVRE  565 (580)
T ss_pred             eEEEEecCCCccc--ccCcccCCeeeecccccccccccccccccccCCCccceeee
Confidence            5677888777777  9999999999775532122223444 235899999866654

>PF12913 SH3_6: SH3 domain of the SH3b1 type; PDB: 3M1U_B

Probab=84.97  E-value=2.2  Score=23.19  Aligned_cols=34  Identities=12%  Similarity=0.271  Sum_probs=22.9

Q ss_pred             CccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcC
Q psy6758          23 YVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPA   57 (101)
Q Consensus        23 eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~   57 (101)
                      +-.+..|+-|.|+..+ |..|..++. ....|||++
T Consensus        20 ~s~l~~gtPv~i~H~S~D~~W~fV~t-~~~~GWV~s   54 (54)
T PF12913_consen   20 NSALHPGTPVYILHTSRDGAWAFVQT-PFYSGWVKS   54 (54)
T ss_dssp             EEEE-TT-EEEEEEE-TTSSEEEEE--SS-EEEEEG
T ss_pred             hcccCCCCCEEEEEECCCCCEEEEec-CCeeEeeeC
Confidence            5578899999999876 667988886 456788874

>KOG3580|consensus

Probab=81.17  E-value=3.4  Score=33.25  Aligned_cols=56  Identities=11%  Similarity=0.221  Sum_probs=38.4

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC----CCCceEEEcCCC----cEEEEcCCceE
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT----NKDWWQVIRSSG----KPFYVPASYVE   61 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~----~~~Ww~~~~~~g----~~G~vP~~yv~   61 (101)
                      ..++.+..|.++...+  ..|+|.+|+++.+++--    ..+|.-++..+.    ..|+||.....
T Consensus       503 DSFyIRtHFE~Eke~P--~gL~FtrGeVFrvvDTLy~GklG~WLAvRiG~dlrE~ErGiIPNksRA  566 (1027)
T KOG3580|consen  503 DSFYIRTHFECEKETP--QGLAFTRGEVFRVVDTLYDGKLGNWLAVRIGNDLRELERGIIPNKSRA  566 (1027)
T ss_pred             ceeEEeeeeeecCCCC--ccccccccceeeeeecccCCCCcceEEEeecccHHHHhcccCCCccHH
Confidence            3456777777776544  49999999999998853    235666665332    46999975443

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	101
1bk2_A	57	A-Spectrin Sh3 Domain D48g Mutant Length = 57		1e-05
3thk_A	73	Structure Of Sh3 Chimera With A Type Ii Ligand Link		1e-05
1uue_A	62	A-Spectrin Sh3 Domain (V44t, D48g Mutant) Length =		3e-05
3ngp_A	62	High Resolution Structure Of Alpha-Spectrin Sh3 Dom		4e-05
1hd3_A	62	A-Spectrin Sh3 Domain F52y Mutant Length = 62		4e-05
2rot_A	70	Structure Of Chimeric Variant Of Sh3 Domain- Shh Le		5e-05
3qwy_A	308	Ced-2 Length = 308		5e-05
2oaw_A	65	Structure Of Shh Variant Of "bergerac" Chimera Of S		5e-05
2cdt_A	62	Alpha-Spectrin Sh3 Domain A56s Mutant Length = 62		6e-05
2rmo_A	70	Solution Structure Of Alpha-Spectrin_sh3-Bergerac F		7e-05
1qkx_A	62	Alpha-Spectrin Src Homology 3 Domain, N47a Mutant I		8e-05
1e6h_A	62	A-Spectrin Sh3 Domain A11v, M25i, V44i, V58l Mutant		8e-05
2lj3_A	63	Pfbd: High-Throughput Strategy Of Backbone Fold Det		1e-04
1m8m_A	62	Solid-State Mas Nmr Structure Of The A-Spectrin Sh3		1e-04
1pwt_A	61	Thermodynamic Analysis Of Alpha-Spectrin Sh3 And Tw		1e-04
3qwx_X	174	Ced-2 1-174 Length = 174		1e-04
1qkw_A	62	Alpha-Spectrin Src Homology 3 Domain, N47g Mutant I		1e-04
1neg_A	83	Crystal Structure Analysis Of N-And C-Terminal Labe		1e-04
2f2v_A	62	Alpha-Spectrin Sh3 Domain A56g Mutant Length = 62		2e-04
2f2w_A	62	Alpha-Spectrin Sh3 Domain R21a Mutant Length = 62		2e-04
3i9q_A	57	Crystal Structure Of The Triple Mutant S19g-P20d-R2		2e-04
3m0p_A	62	Crystal Structure Of The R21d Mutant Of Alpha-Spect		2e-04
2f2x_A	62	Alpha-Spectrin Sh3 Domain R21g Mutant Length = 62		2e-04
1h8k_A	62	A-Spectrin Sh3 Domain A11v, V23l, M25v, V53i, V58l		2e-04
3m0s_A	57	Crystal Structure Of The R21d Mutant Of Alpha-Spect		3e-04
1e6g_A	62	A-Spectrin Sh3 Domain A11v, V23l, M25i, V53i, V58l		3e-04
1e7o_A	62	A-Spectrin Sh3 Domain A11v, V23l, M25v, V44i, V58l		3e-04
2kr3_A	70	Solution Structure Of Sha-D Length = 70		3e-04
1x2p_A	68	Solution Structure Of The Sh3 Domain Of The Protein		5e-04
1aww_A	67	Sh3 Domain From Bruton's Tyrosine Kinase, Nmr, 42 S		8e-04
2lqw_A	303	Solution Structure Of Phosphorylated Crkl Length =		8e-04
2jw4_A	72	Nmr Solution Structure Of The N-Terminal Sh3 Domain		8e-04
2lqn_A	303	Solution Structure Of Crkl Length = 303		9e-04

>pdb|1BK2|A Chain A, A-Spectrin Sh3 Domain D48g Mutant Length = 57

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 35/52 (67%), Gaps = 1/52 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   +G+  +VPA+YV+
Sbjct: 4  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNGRQGFVPAAYVK 54

>pdb|3THK|A Chain A, Structure Of Sh3 Chimera With A Type Ii Ligand Linked To The Chain C- Terminal Length = 73

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNG 69
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+      + 
Sbjct: 8  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLDPAQSA 66
Query: 70 NRNNV 74
          +R N+
Sbjct: 67 SRENL 71

>pdb|1UUE|A Chain A, A-Spectrin Sh3 Domain (V44t, D48g Mutant) Length = 62

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+    +G+  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKT-EVNGRQGFVPAAYV 58

>pdb|3NGP|A Chain A, High Resolution Structure Of Alpha-Spectrin Sh3 Domain Mutant With A Redesigned Core Length = 62

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + + +++G+ L L+  TNKDWW+ I  +G+  +VPA+Y+
Sbjct: 9  VLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWK-IEVNGRQGFVPAAYL 58

>pdb|1HD3|A Chain A, A-Spectrin Sh3 Domain F52y Mutant Length = 62

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  YVPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGYVPAAYV 58

>pdb|2ROT|A Chain A, Structure Of Chimeric Variant Of Sh3 Domain- Shh Length = 70

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV---IRSSGKPF----YVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   I  +GK +    +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYV 66

>pdb|3QWY|A Chain A, Ced-2 Length = 308

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Composition-based stats.
 Identities = 18/59 (30%), Positives = 35/59 (59%)
Query: 10  VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
           V+  F ++ +    +  ++GE+L ++ KTN+DWW+   + G    VPA+YV++  +  N
Sbjct: 150 VVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQMEFHN 208

>pdb|2OAW|A Chain A, Structure Of Shh Variant Of "bergerac" Chimera Of Spectrin Sh3 Length = 65

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 37/59 (62%), Gaps = 7/59 (11%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV---IRSSGKPF----YVPASYVE 61
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   I  +GK +    +VPA+YV+
Sbjct: 4  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVK 62

>pdb|2CDT|A Chain A, Alpha-Spectrin Sh3 Domain A56s Mutant Length = 62

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPASYV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPASYV 58

>pdb|2RMO|A Chain A, Solution Structure Of Alpha-Spectrin_sh3-Bergerac From Chicken Length = 70

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/58 (39%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV---IRSSGKPF----YVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V     ++GK +    +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKATANGKTYERQGFVPAAYV 66

>pdb|1QKX|A Chain A, Alpha-Spectrin Src Homology 3 Domain, N47a Mutant In The Distal Loop Length = 62

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVADRQGFVPAAYV 58

>pdb|1E6H|A Chain A, A-Spectrin Sh3 Domain A11v, M25i, V44i, V58l Mutants Length = 62

Iteration: 1
 Score = 42.0 bits (97), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V I++G+ L L+  TNKDWW+ I  + +  +VPA+Y+
Sbjct: 9  VLVLYDYQEKSPREVTIKKGDILTLLNSTNKDWWK-IEVNDRQGFVPAAYL 58

>pdb|2LJ3|A Chain A, Pfbd: High-Throughput Strategy Of Backbone Fold Determination For Small Well-Folded Proteins In Less Than A Day Length = 63

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 58

>pdb|1M8M|A Chain A, Solid-State Mas Nmr Structure Of The A-Spectrin Sh3 Domain Length = 62

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 58

>pdb|1PWT|A Chain A, Thermodynamic Analysis Of Alpha-Spectrin Sh3 And Two Of Its Circular Permutants With Different Loop Lengths: Discerning The Reasons For Rapid Folding In Proteins Length = 61

Iteration: 1
 Score = 41.6 bits (96), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/52 (40%), Positives = 34/52 (65%), Gaps = 1/52 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+
Sbjct: 8  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVK 58

>pdb|3QWX|X Chain X, Ced-2 1-174 Length = 174

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 17/53 (32%), Positives = 33/53 (62%)
Query: 10  VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
           V+  F ++ +    +  ++GE+L ++ KTN+DWW+   + G    VPA+YV++
Sbjct: 121 VVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI 173

>pdb|1QKW|A Chain A, Alpha-Spectrin Src Homology 3 Domain, N47g Mutant In The Distal Loop Length = 62

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V     +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVGDRQGFVPAAYV 58

>pdb|1NEG|A Chain A, Crystal Structure Analysis Of N-And C-Terminal Labeled Sh3- Domain Of Alpha-Chicken Spectrin Length = 83

Iteration: 1
 Score = 41.2 bits (95), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 4/58 (6%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA+YV   KKL+
Sbjct: 20 VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV---KKLA 73

>pdb|2F2V|A Chain A, Alpha-Spectrin Sh3 Domain A56g Mutant Length = 62

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V   + +  +VPA YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAGYV 58

>pdb|2F2W|A Chain A, Alpha-Spectrin Sh3 Domain R21a Mutant Length = 62

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K    V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPAEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 58

>pdb|3I9Q|A Chain A, Crystal Structure Of The Triple Mutant S19g-P20d-R21s Of Alpha Spectrin Sh3 Domain Length = 57

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K    V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 4  VLALYDYQEKGDSEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 53

>pdb|3M0P|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3 Domain. Crystal Obtained In Ammonium Sulphate At Ph 4. Length = 62

Iteration: 1
 Score = 40.8 bits (94), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K    V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPDEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 58

>pdb|2F2X|A Chain A, Alpha-Spectrin Sh3 Domain R21g Mutant Length = 62

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K    V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPGEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 58

>pdb|1H8K|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25v, V53i, V58l Mutant Length = 62

Iteration: 1
 Score = 40.4 bits (93), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V     +  ++PA+Y+
Sbjct: 9  VLVLYDYQEKSPREVTVKKGDILTLLNSTNKDWWKV-EVDDRQGFIPAAYL 58

>pdb|3M0S|A Chain A, Crystal Structure Of The R21d Mutant Of Alpha-Spectrin Sh3 Domain. Crystal Obtained In Ammonium Sulphate At Ph 7 Length = 57

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 32/51 (62%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K    V +++G+ L L+  TNKDWW+V   + +  +VPA+YV
Sbjct: 4  VLALYDYQEKSPDEVTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYV 53

>pdb|1E6G|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25i, V53i, V58l Mutant Length = 62

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + + I++G+ L L+  TNKDWW+V   + +  ++PA+Y+
Sbjct: 9  VLVLYDYQEKSPRELTIKKGDILTLLNSTNKDWWKV-EVNDRQGFIPAAYL 58

>pdb|1E7O|A Chain A, A-Spectrin Sh3 Domain A11v, V23l, M25v, V44i, V58l Mutations Length = 62

Iteration: 1
 Score = 40.4 bits (93), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/51 (37%), Positives = 33/51 (64%), Gaps = 1/51 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          VL  +DY  K  + + +++G+ L L+  TNKDWW+ I  + +  +VPA+Y+
Sbjct: 9  VLVLYDYQEKSPRELTVKKGDILTLLNSTNKDWWK-IEVNDRQGFVPAAYL 58

>pdb|2KR3|A Chain A, Solution Structure Of Sha-D Length = 70

Iteration: 1
 Score = 40.0 bits (92), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 21/58 (36%), Positives = 36/58 (62%), Gaps = 7/58 (12%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSG------KPFYVPASYV 60
          VL  +DY  K  + V +++G+ L L+  TNKDWW+V ++++       +  +VPA+YV
Sbjct: 9  VLALYDYQEKSPREVTMKKGDILTLLNSTNKDWWKVEVKATANDKTYERQGFVPAAYV 66

>pdb|1X2P|A Chain A, Solution Structure Of The Sh3 Domain Of The Protein Arginine N-Methyltransferase 2 Length = 68

Iteration: 1
 Score = 39.3 bits (90), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 15 DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNG 69
          DY+  D   +    GEK+ ++++T  DWW   R +G   Y+PA++V  +   S+G
Sbjct: 15 DYAATDETQLSFLRGEKILILRQTTADWWWGER-AGCCGYIPANHVGKHSGPSSG 68

>pdb|1AWW|A Chain A, Sh3 Domain From Bruton's Tyrosine Kinase, Nmr, 42 Structures Length = 67

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 14/52 (26%), Positives = 35/52 (67%)
Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          KV+  +DY   +   +++++G++ F+++++N  WW+    +G+  Y+P++YV
Sbjct: 10 KVVALYDYMPMNANDLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYV 61

>pdb|2LQW|A Chain A, Solution Structure Of Phosphorylated Crkl Length = 303

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 8   LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
           ++ LYDF     D + +  ++GE L +I+K  + WW      G+   +P  YVE   + S
Sbjct: 128 VRTLYDF--PGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRSS 185
Query: 68  ----NGNRNN 73
               +GNRN+
Sbjct: 186 PHGKHGNRNS 195

>pdb|2JW4|A Chain A, Nmr Solution Structure Of The N-Terminal Sh3 Domain Of Human Nckalpha Length = 72

Iteration: 1
 Score = 38.9 bits (89), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 33/52 (63%), Gaps = 1/52 (1%)
Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          V+  FDY  +  + + I++ E+L+L+  + K WW+V  S  K  +VP++YVE
Sbjct: 10 VVAKFDYVAQQEQELDIKKNERLWLLDDS-KSWWRVRNSMNKTGFVPSNYVE 60

>pdb|2LQN|A Chain A, Solution Structure Of Crkl Length = 303

Iteration: 1
 Score = 38.5 bits (88), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 22/70 (31%), Positives = 36/70 (51%), Gaps = 6/70 (8%)
Query: 8   LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
           ++ LYDF     D + +  ++GE L +I+K  + WW      G+   +P  YVE   + S
Sbjct: 128 VRTLYDF--PGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRSS 185
Query: 68  ----NGNRNN 73
               +GNRN+
Sbjct: 186 PHGKHGNRNS 195

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	101
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	6e-12
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	2e-11
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	1e-10
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	3e-10
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	8e-10
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	2e-09
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	2e-09
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	3e-09
1awj_A	77	ITK; transferase, regulatory intramolecular comple	3e-09
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	6e-09
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	7e-09
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	7e-09
1wxb_A	68	Epidermal growth factor receptor pathway substrate	8e-09
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	1e-08
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	1e-08
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	2e-08
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	2e-08
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	2e-08
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	2e-08
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	3e-08
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	2e-06
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	4e-08
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	4e-08
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	5e-08
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	7e-08
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	7e-08
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	7e-08
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	7e-08
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	8e-08
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	1e-07
1i07_A	60	Epidermal growth factor receptor kinase substrate	1e-07
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	1e-07
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	2e-07
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	2e-07
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	2e-07
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	2e-07
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	3e-07
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	3e-07
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	2e-05
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	3e-07
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	3e-07
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	4e-07
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	4e-07
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	5e-07
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	5e-07
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	6e-07
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	6e-07
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	7e-07
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	7e-07
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	8e-07
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	1e-06
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	1e-06
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	1e-06
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	1e-06
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	1e-06
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	1e-06
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	1e-06
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	2e-06
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	2e-06
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	3e-06
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	3e-06
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	3e-06
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	4e-06
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	4e-06
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	4e-06
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	4e-06
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	4e-06
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	4e-06
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	4e-06
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	5e-04
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	5e-06
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	5e-06
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	6e-06
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	6e-06
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	6e-06
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	7e-06
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	9e-06
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	9e-06
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	1e-05
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	1e-05
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	1e-05
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	1e-05
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	2e-05
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	2e-05
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	2e-05
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	2e-05
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	2e-05
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	3e-05
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	4e-05
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	4e-05
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	4e-05
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	4e-05
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	4e-05
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	4e-05
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	5e-05
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	5e-05
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	6e-05
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	7e-05
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	8e-05
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	9e-05
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	1e-04
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	2e-04
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	2e-04
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	2e-04
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	2e-04
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	2e-04
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	3e-04
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	3e-04
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	3e-04
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	3e-04
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	3e-04
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	3e-04
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	5e-04
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	7e-04
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens} Length	8e-04
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	9e-04

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic} Length = 73

 Score = 55.1 bits (133), Expect = 6e-12
 Identities = 21/76 (27%), Positives = 38/76 (50%), Gaps = 6/76 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            L  +    ++   V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+     S 
Sbjct: 4  PPLPPYSAGGRE---VTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLD--SG 57

Query: 69 GNRNNVENINPTMEKT 84
            +  V  +    EK+
Sbjct: 58 TGKELVLALYDYQEKS 73

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 53.4 bits (129), Expect = 2e-11
 Identities = 21/62 (33%), Positives = 33/62 (53%), Gaps = 3/62 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEVYKKLS 67
            +Y F+ S++    + + EGE L L+++   D W +V R  G   YVP SY+ V    S
Sbjct: 11 VAIYHFEGSSEG--TISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTSGPS 68

Query: 68 NG 69
          +G
Sbjct: 69 SG 70

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 51.9 bits (125), Expect = 1e-10
 Identities = 14/55 (25%), Positives = 26/55 (47%), Gaps = 2/55 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEV 62
          +V+YDF     + + + + EGE + +        W +   + G+   VP  YVE+
Sbjct: 13 RVMYDFAAEPGNNE-LTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEI 66

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.8 bits (122), Expect = 3e-10
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEV 62
          KV+Y +  S  D   + I+E E L +I+    +DW +     G+  YVP  Y++ 
Sbjct: 17 KVVYSYKASQPD--ELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQF 69

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus} Length = 120

 Score = 50.7 bits (121), Expect = 8e-10
 Identities = 18/94 (19%), Positives = 32/94 (34%), Gaps = 4/94 (4%)

Query: 3  LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV--IRSSGKPFYVPASYV 60
          +  +    LY+F     D   + +  GE L +    + +W+    I   G P  VP SYV
Sbjct: 1  MAPLFAVTLYEFKAERDDE--LDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYV 58

Query: 61 EVYKKLSNGNRNNVENINPTMEKTRSYSEGNDKV 94
           +   +      +V+  +               V
Sbjct: 59 RIIDLMDPAKYASVDTYDREQVMKIIDEFKIPTV 92

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 58

 Score = 48.3 bits (116), Expect = 2e-09
 Identities = 15/56 (26%), Positives = 27/56 (48%), Gaps = 4/56 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR--SSGKPFYVPASYVEV 62
          KVLY +     D   + I  G+K+ L+ +     W  I   ++G+   VP +Y+ +
Sbjct: 5  KVLYAYVQKDDD--EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI 58

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens} Length = 68

 Score = 48.4 bits (116), Expect = 2e-09
 Identities = 15/57 (26%), Positives = 25/57 (43%), Gaps = 2/57 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
            + DF         +  ++GE L +I+K    WW    + G    VP +Y+E Y +
Sbjct: 14 IAVGDFTAQQVGD--LTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYSE 68

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 85

 Score = 48.5 bits (116), Expect = 3e-09
 Identities = 15/66 (22%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 2  ELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          E ++  +  LYD+  +      + ++  E+  L+  +   WW+V   +G   YVP+SY+ 
Sbjct: 16 EPEETVVIALYDYQTNDPQE--LALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLV 73

Query: 62 VYKKLS 67
               +
Sbjct: 74 EKSPNN 79

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A Length = 77

 Score = 48.5 bits (116), Expect = 3e-09
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
            LYD+  +      + ++  E+ +L+  +   WW+V   +G   Y P+SY+ 
Sbjct: 24 IALYDYQTNDPQE--LALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 74

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A Length = 69

 Score = 47.3 bits (113), Expect = 6e-09
 Identities = 14/62 (22%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEV 62
          +D   +  YDF  S    + + +++G+ +F+ +     W    +    K  +VP +Y+  
Sbjct: 1  KDPKFEAAYDFPGSGSSSE-LPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTP 59

Query: 63 YK 64
          YK
Sbjct: 60 YK 61

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens} Length = 72

 Score = 47.3 bits (113), Expect = 7e-09
 Identities = 17/70 (24%), Positives = 36/70 (51%), Gaps = 3/70 (4%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          ++V +   +D+    +    + I++ E+L+L+  + K WW+V  S  K  +VP++YVE  
Sbjct: 6  EEVVVVAKFDYVAQQEQE--LDIKKNERLWLLDDS-KSWWRVRNSMNKTGFVPSNYVERK 62

Query: 64 KKLSNGNRNN 73
                  ++
Sbjct: 63 NSARAAANSS 72

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 75

 Score = 47.5 bits (113), Expect = 7e-09
 Identities = 11/63 (17%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPF---YVPASYVEVYKK 65
            + D++   +       QEG  + ++++    WW      G      +VP++Y+E    
Sbjct: 14 VSIADYEGDEET---AGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKNS 70

Query: 66 LSN 68
            +
Sbjct: 71 GPS 73

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 46.9 bits (112), Expect = 8e-09
 Identities = 16/61 (26%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          K+LYDF     +   + + + E L +++   + WW++   SG+  YVP + +      S+
Sbjct: 11 KILYDFTARNANE--LSVLKDEVLEVLED-GRQWWKLRSRSGQAGYVPCNILGEASGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens} Length = 68

 Score = 46.5 bits (111), Expect = 1e-08
 Identities = 18/61 (29%), Positives = 34/61 (55%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          +VLY+F+        + + +GEKL ++   +K WW V   +G+  Y+P++ +E     S+
Sbjct: 11 QVLYEFEARNPRE--LTVVQGEKLEVLDH-SKRWWLVKNEAGRSGYIPSNILEPLSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A Length = 67

 Score = 46.1 bits (110), Expect = 2e-08
 Identities = 13/57 (22%), Positives = 34/57 (59%), Gaps = 2/57 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
            LYD+     +   +++++G++ F+++++N  WW+    +G+  Y+P++YV   + 
Sbjct: 12 VALYDYMPMNAND--LQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAED 66

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A Length = 108

 Score = 47.1 bits (112), Expect = 2e-08
 Identities = 18/62 (29%), Positives = 26/62 (41%), Gaps = 4/62 (6%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWW--QVIRSSGKPFYVPASYVEVYKKL 66
           VLYDF     D   +    GE LF+    N +W+  + I   G P  VP  +V +    
Sbjct: 9  IVLYDFKAEKADE--LTTYVGENLFICAHHNCEWFIAKPIGRLGGPGLVPVGFVSIIDIA 66

Query: 67 SN 68
          + 
Sbjct: 67 TG 68

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1 Length = 65

 Score = 45.7 bits (109), Expect = 2e-08
 Identities = 16/60 (26%), Positives = 30/60 (50%), Gaps = 2/60 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          + L+DF+ + ++   +  ++G+ L +  K  + WW    S GK   +P  YVE Y    +
Sbjct: 7  RALFDFNGNDEED--LPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYHHHHH 64

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1 Length = 67

 Score = 45.7 bits (109), Expect = 2e-08
 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
          +YDF  +      +R++ G++  +++K +  WW+     G   Y+P++YV   K  +
Sbjct: 8  MYDFQATEAHD--LRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSNN 62

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 48.1 bits (114), Expect = 3e-08
 Identities = 14/86 (16%), Positives = 32/86 (37%), Gaps = 3/86 (3%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL 66
          T + + D  Y    G  + +  G+ + +++K+   WW   +   K  ++PAS++E     
Sbjct: 13 TYRAIAD--YEKTSGSEMALSTGDVVEVVEKSESGWWFC-QMKAKRGWIPASFLEPLDSP 69

Query: 67 SNGNRNNVENINPTMEKTRSYSEGND 92
                            ++Y+    
Sbjct: 70 DETEDPEPNYAGEPYVAIKAYTAVEG 95

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B Length = 193

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 19/89 (21%), Positives = 32/89 (35%), Gaps = 4/89 (4%)

Query: 9   KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK-KLS 67
             +  +     D   V + EGE + +I K    WW + R      Y P+ Y++     +S
Sbjct: 85  VAIKAYTAVEGD--EVSLLEGEAVEVIHKLLDGWWVI-RKDDVTGYFPSMYLQKSGQDVS 141

Query: 68  NGNRNNVENINPTMEKTRSYSEGNDKVRK 96
              R       P     R+    + + RK
Sbjct: 142 QAQRQIKRGAPPRRSSIRNAHSIHQRSRK 170

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A Length = 58

 Score = 44.9 bits (107), Expect = 4e-08
 Identities = 9/58 (15%), Positives = 27/58 (46%), Gaps = 2/58 (3%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEVY 63
            +  YDF   +     + +++G+ +++ ++    W    +    K  +VP +Y++ +
Sbjct: 2  MFEAAYDFP-GSGSPSELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKPH 58

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 70

 Score = 45.0 bits (107), Expect = 4e-08
 Identities = 15/57 (26%), Positives = 28/57 (49%), Gaps = 3/57 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
           V+ ++         + +Q GE + +I+K    WW V  +S +  +VPA+Y+E    
Sbjct: 12 VVVSNYKKQENSE--LSLQAGEVVDVIEKNESGWWFV-STSEEQGWVPATYLEAQNS 65

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A Length = 57

 Score = 44.4 bits (106), Expect = 5e-08
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          + L+DF+ + ++   +  ++G+ L +  K  + WW    S GK   +P  YVE Y
Sbjct: 5  RALFDFNGNDEED--LPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY 57

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} Length = 73

 Score = 44.6 bits (106), Expect = 7e-08
 Identities = 21/66 (31%), Positives = 37/66 (56%), Gaps = 3/66 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            LYD+   +     V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+      +
Sbjct: 9  LALYDYQEKSPRE--VTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLDPAQS 65

Query: 69 GNRNNV 74
           +R N+
Sbjct: 66 ASRENL 71

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1 Length = 83

 Score = 45.1 bits (107), Expect = 7e-08
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
            LYD+   +     V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+   
Sbjct: 21 LALYDYQEKSPRE--VTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLA 73

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A Length = 67

 Score = 44.5 bits (106), Expect = 7e-08
 Identities = 16/65 (24%), Positives = 36/65 (55%), Gaps = 3/65 (4%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          ++V +   +D+         + I++ E+L+L+  + K WW+V  ++ +  YVP++YVE  
Sbjct: 3  EEVIVIAKWDYTAQQDQE--LDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNYVERK 59

Query: 64 KKLSN 68
           +  +
Sbjct: 60 LEHHH 64

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ... Length = 62

 Score = 44.1 bits (105), Expect = 7e-08
 Identities = 18/54 (33%), Positives = 34/54 (62%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
           VLYD+   +     + +++G+ L L+  TNKDWW++   +G+  +VPA+Y++ 
Sbjct: 10 LVLYDYQEKSPRE--LTVKKGDILTLLNSTNKDWWKI-EVNGRQGFVPAAYLKK 60

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae} Length = 70

 Score = 44.6 bits (106), Expect = 8e-08
 Identities = 14/54 (25%), Positives = 28/54 (51%), Gaps = 1/54 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          K LY +D    D   +  ++ E L  +      WW+  R++G+   +P++YV++
Sbjct: 9  KALYPYDADDDDAYEISFEQNEILQ-VSDIEGRWWKARRANGETGIIPSNYVQL 61

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 90

 Score = 44.7 bits (106), Expect = 1e-07
 Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYKKLS 67
             Y F    +    +  ++GE + LI+K N++W++  I  +G+    PASYV+V ++  
Sbjct: 21 VAQYTFKGDLEVE--LSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSREPR 78

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A Length = 60

 Score = 43.8 bits (104), Expect = 1e-07
 Identities = 12/56 (21%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          K  YDF    ++   + + + + L ++    + WW+V  +SG   +VP + +++ +
Sbjct: 5  KSKYDFV--ARNSSELSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMR 57

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A Length = 63

 Score = 43.7 bits (104), Expect = 1e-07
 Identities = 16/64 (25%), Positives = 28/64 (43%), Gaps = 2/64 (3%)

Query: 1  MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          ME        LYDF  S  +   + I +GEKL ++   +   W   ++     +VP++Y+
Sbjct: 1  MENDPNLFVALYDFVASGDNT--LSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSAYI 58

Query: 61 EVYK 64
              
Sbjct: 59 TPVN 62

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 43.4 bits (103), Expect = 2e-07
 Identities = 15/61 (24%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            + D+  + +    +    GEK+ ++++T  DWW     +G   Y+PA++V  +   S+
Sbjct: 11 VAIADYAATDETQ--LSFLRGEKILILRQTTADWWWG-ERAGCCGYIPANHVGKHSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens} Length = 70

 Score = 43.4 bits (103), Expect = 2e-07
 Identities = 13/62 (20%), Positives = 35/62 (56%), Gaps = 3/62 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYKKLS 67
             ++F+  T+    +  ++GE++ L+++ +++W++  I  + +    P +YV+V    S
Sbjct: 11 IAKFNFNGDTQVE--MSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVISGPS 68

Query: 68 NG 69
          +G
Sbjct: 69 SG 70

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens} Length = 86

 Score = 44.0 bits (104), Expect = 2e-07
 Identities = 16/58 (27%), Positives = 34/58 (58%), Gaps = 3/58 (5%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          ++V +   +D+         + I++ E+L+L+   +K WW+V  ++ +  YVP++YVE
Sbjct: 30 EEVIVIAKWDYTAQQDQE--LDIKKNERLWLLDD-SKTWWRVRNAANRTGYVPSNYVE 84

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 71

 Score = 43.1 bits (102), Expect = 2e-07
 Identities = 15/57 (26%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
            +  +   +KD   +  ++G  + +I+K  + WW + R  GK  + PASY++  K 
Sbjct: 12 VTVQPYTSQSKDE--IGFEKGVTVEVIRKNLEGWWYI-RYLGKEGWAPASYLKKAKD 65

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus} Length = 77

 Score = 43.3 bits (102), Expect = 3e-07
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 26 IQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          +++G+ L L+  TNKDWW+V   + +  +VPA+YV+   
Sbjct: 10 MKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLD 47

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 45.6 bits (107), Expect = 3e-07
 Identities = 16/55 (29%), Positives = 30/55 (54%), Gaps = 2/55 (3%)

Query: 9   KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
              + F    +    +  ++GE+L ++ KTN+DWW+   + G    VPA+YV++ 
Sbjct: 151 VGTFKFTGERETD--LPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQ 203

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans} Length = 308

 Score = 40.6 bits (94), Expect = 2e-05
 Identities = 11/54 (20%), Positives = 27/54 (50%), Gaps = 1/54 (1%)

Query: 9   KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
           KV +D   +  D   +R+++G+ + + +K +   ++     G+   VP +Y+  
Sbjct: 251 KVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGMYK-AELDGQIGSVPHTYLRF 303

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens} Length = 283

 Score = 45.8 bits (108), Expect = 3e-07
 Identities = 12/54 (22%), Positives = 23/54 (42%), Gaps = 5/54 (9%)

Query: 4   QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPA 57
             + L  + D+         V + +G++  L+       W+V+ SSG    VP+
Sbjct: 197 GRLPLLAVCDYK-----QVEVTVHKGDECQLVGPAQPSHWKVLSSSGSEAAVPS 245

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 80

 Score = 43.2 bits (102), Expect = 3e-07
 Identities = 8/56 (14%), Positives = 20/56 (35%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
               +         +    G ++ +++K    WW V R      + P+ Y+ + +
Sbjct: 12 MTCSAYQKVQDSE--ISFPAGVEVQVLEKQESGWWYV-RFGELEGWAPSHYLVLDE 64

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans} Length = 174

 Score = 44.8 bits (105), Expect = 4e-07
 Identities = 17/53 (32%), Positives = 33/53 (62%)

Query: 10  VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
           V+  F ++ +    +  ++GE+L ++ KTN+DWW+   + G    VPA+YV++
Sbjct: 121 VVGTFKFTGERETDLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI 173

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 79

 Score = 42.8 bits (101), Expect = 4e-07
 Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 4/69 (5%)

Query: 2  ELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYV 60
           L    L VL D+            + GEKL +I      WW+ I  S+G+  Y+P   V
Sbjct: 14 GLDSDFLAVLSDYPSPDISP--PIFRRGEKLRVISDEG-GWWKAISLSTGRESYIPGICV 70

Query: 61 EVYKKLSNG 69
                S+G
Sbjct: 71 ARVSGPSSG 79

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A Length = 60

 Score = 42.1 bits (100), Expect = 5e-07
 Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 4/56 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQV-IRSSGKPFYVPASYVEV 62
           V YDF   ++D   + I+ G+K++++    +KDWW   +  SGK   VPA ++E 
Sbjct: 6  IVQYDFMAESQDE--LTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEP 59

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A Length = 68

 Score = 42.3 bits (100), Expect = 5e-07
 Identities = 12/56 (21%), Positives = 26/56 (46%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
             YDF         + +++ + L ++   ++ WW+V   +G+  YVP + +  Y 
Sbjct: 12 LCNYDFQARNSSE--LSVKQRDVLEVLDD-SRKWWKVRDPAGQEGYVPYNILTPYP 64

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} Length = 91

 Score = 42.8 bits (101), Expect = 6e-07
 Identities = 17/61 (27%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--WWQVIRSSGKPFYVPASYVEVYKKL 66
          + LY F   T++   +  ++GE + +I+K   D  WW+   + G+   VP +YV V    
Sbjct: 21 QTLYPFSSVTEEE--LNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG 78

Query: 67 S 67
           
Sbjct: 79 P 79

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 80

 Score = 42.4 bits (100), Expect = 6e-07
 Identities = 17/62 (27%), Positives = 35/62 (56%), Gaps = 6/62 (9%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVEVY 63
          + LYDF     + + V +++G+ + ++ K      + DWW+V   +G   Y+P +Y+E+ 
Sbjct: 18 RALYDFVPENPEME-VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII 76

Query: 64 KK 65
          K+
Sbjct: 77 KR 78

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae} Length = 71

 Score = 42.2 bits (100), Expect = 7e-07
 Identities = 19/61 (31%), Positives = 33/61 (54%), Gaps = 4/61 (6%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQV-IRSSGKPFYVPASYVEVYKKL 66
           V YDF   ++D   + I+ G+K++++    +KDWW   +  SGK   VPA ++E  +  
Sbjct: 10 IVQYDFMAESQDE--LTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVRDK 67

Query: 67 S 67
           
Sbjct: 68 K 68

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A Length = 67

 Score = 41.9 bits (99), Expect = 7e-07
 Identities = 12/58 (20%), Positives = 34/58 (58%), Gaps = 3/58 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYKK 65
             ++F+  T+    +  ++GE++ L+++ +++W++  I  + +    P +YV+V K+
Sbjct: 10 IAKFNFNGDTQVE--MSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKR 65

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A Length = 65

 Score = 41.9 bits (99), Expect = 8e-07
 Identities = 19/60 (31%), Positives = 33/60 (55%), Gaps = 9/60 (15%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-------IRSSGKPFYVPASYVE 61
            LYD+   +     V +++G+ L L+  TNKDWW+V        ++  +  +VPA+YV+
Sbjct: 5  LALYDYQEKSPRE--VTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVK 62

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1 Length = 63

 Score = 41.2 bits (97), Expect = 1e-06
 Identities = 15/39 (38%), Positives = 26/39 (66%), Gaps = 1/39 (2%)

Query: 26 IQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          +++G+ L L+  TNKDWW+V   + +  +VPA+YV+   
Sbjct: 8  MKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKKLD 45

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A* Length = 303

 Score = 43.8 bits (102), Expect = 1e-06
 Identities = 17/80 (21%), Positives = 34/80 (42%)

Query: 12  YDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNR 71
             +D+   D + +  ++GE L +I+K  + WW      G+   +P  YVE   + S   +
Sbjct: 130 TLYDFPGNDAEDLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVRSSPHGK 189

Query: 72  NNVENINPTMEKTRSYSEGN 91
           +   N N       +++   
Sbjct: 190 HGNRNSNSYGIPEPAHAYAQ 209

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A Length = 73

 Score = 41.6 bits (98), Expect = 1e-06
 Identities = 13/54 (24%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          +V  DF  S  D   +++++G+ + +I K     W     + K       YV+V
Sbjct: 13 RVHTDFTPSPYDTDSLKLKKGDIIDIISKPPMGTWMG-LLNNKVGTFKFIYVDV 65

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens} Length = 90

 Score = 42.0 bits (99), Expect = 1e-06
 Identities = 14/60 (23%), Positives = 37/60 (61%), Gaps = 4/60 (6%)

Query: 3  LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVE 61
          ++D+ +  LYD+   + D   +  Q+G+++ +++++  +WW+    ++ K  Y+P++YV 
Sbjct: 1  MEDIIVVALYDYVSWSPDD--LSFQKGDQMVVLEESG-EWWKARSLATRKEGYIPSNYVA 57

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A Length = 495

 Score = 44.0 bits (104), Expect = 1e-06
 Identities = 14/50 (28%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
          LYDF  S  +   + I +GEKL ++   +   W   ++     +VP++Y+
Sbjct: 49 LYDFVASGDNT--LSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYI 96

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A Length = 71

 Score = 41.1 bits (97), Expect = 1e-06
 Identities = 17/64 (26%), Positives = 31/64 (48%), Gaps = 4/64 (6%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--WWQVIRSSGKPFYVPASYVEVYKKL 66
          + LY F   T++   +  ++GE + +I+K   D  WW+   + G+   VP +YV V    
Sbjct: 10 QTLYPFSSVTEEE--LNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSDG 67

Query: 67 SNGN 70
             +
Sbjct: 68 PALH 71

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A Length = 62

 Score = 41.1 bits (97), Expect = 1e-06
 Identities = 13/60 (21%), Positives = 35/60 (58%), Gaps = 4/60 (6%)

Query: 3  LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVE 61
          LQD  +  L+ ++ S      +  ++GE+L +++++  +WW+    ++G+  ++P ++V 
Sbjct: 4  LQDNLVIALHSYEPSHDGD--LGFEKGEQLRILEQSG-EWWKAQSLTTGQEGFIPFNFVA 60

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 68

 Score = 41.0 bits (97), Expect = 2e-06
 Identities = 19/61 (31%), Positives = 35/61 (57%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          +VL+ F   TK+   +++  G  +F++KK N +W  V+  +G+   VP +Y+E     S+
Sbjct: 11 RVLFGFVPETKEE--LQVMPGNIVFVLKKGNDNWATVMF-NGQKGLVPCNYLEPVSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens} Length = 72

 Score = 41.2 bits (97), Expect = 2e-06
 Identities = 12/58 (20%), Positives = 24/58 (41%), Gaps = 6/58 (10%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPF----YVPASYVEVYK 64
          L+DF   T +   +  + G+   + +K  + WW  +           YVP +Y+   +
Sbjct: 16 LWDFKSRTDEE--LSFRAGDVFHVARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE 71

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A Length = 58

 Score = 40.3 bits (95), Expect = 3e-06
 Identities = 13/57 (22%), Positives = 25/57 (43%), Gaps = 3/57 (5%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEV 62
               YD+D +  +   +   E +K+  I+  + DWW   +   G     P++YV +
Sbjct: 2  WATAEYDYDAAEDNE--LTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSL 56

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1 Length = 69

 Score = 40.4 bits (95), Expect = 3e-06
 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVEV 62
          + LYDF     + + V +++G+ + ++ K      + DWW+V   +G   Y+P +Y+E+
Sbjct: 11 RALYDFVPENPEME-VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI 68

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A Length = 79

 Score = 40.4 bits (95), Expect = 3e-06
 Identities = 17/68 (25%), Positives = 34/68 (50%), Gaps = 3/68 (4%)

Query: 1  MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASY 59
          M       + LYD++  T+D   +   +GEK  ++  +  DWW+    ++G+  Y+P+ Y
Sbjct: 1  MVQISTLFEALYDYEARTEDD--LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIY 58

Query: 60 VEVYKKLS 67
          +    +L 
Sbjct: 59 LAPVDRLD 66

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A Length = 92

 Score = 40.6 bits (95), Expect = 4e-06
 Identities = 17/65 (26%), Positives = 35/65 (53%), Gaps = 6/65 (9%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVEVY 63
          + LYDF     + + V +++G+ + ++ K      + DWW+V   +G   Y+P +Y+E+ 
Sbjct: 18 RALYDFVPENPEME-VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII 76

Query: 64 KKLSN 68
          K+   
Sbjct: 77 KRRKK 81

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae} Length = 73

 Score = 40.4 bits (95), Expect = 4e-06
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYK 64
            LYDF+    D + +R+ EG+ +F+  K  + W      S  K   VP  +V   +
Sbjct: 9  VALYDFE-PENDNE-LRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 63

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 79

 Score = 40.4 bits (95), Expect = 4e-06
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 7/57 (12%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKK----TNKDWWQVIRSSGKPFYVPASYVE 61
            +Y F     +   + +   +KL +++      N +WW     +GK  YVP++Y+ 
Sbjct: 17 FAVYTFKARNPNE--LSVSANQKLKILEFKDVTGNTEWWLA-EVNGKKGYVPSNYIR 70

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 77

 Score = 40.1 bits (94), Expect = 4e-06
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 10/67 (14%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPF--------YVPASYVEV 62
          L+D+   T +   +  + G+KL ++  +++ WW       K          Y+P++YV  
Sbjct: 13 LFDYQARTAED--LSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAE 70

Query: 63 YKKLSNG 69
              S+G
Sbjct: 71 DSGPSSG 77

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A Length = 450

 Score = 42.3 bits (100), Expect = 4e-06
 Identities = 12/76 (15%), Positives = 32/76 (42%), Gaps = 3/76 (3%)

Query: 2  ELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYV 60
                    Y+F  + +    +   +G+ L ++  T   +W++     G+   +PA+YV
Sbjct: 8  WPSGTECIAKYNFHGTAEQD--LPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYV 65

Query: 61 EVYKKLSNGNRNNVEN 76
          +  + +  G + ++  
Sbjct: 66 QKREGVKAGTKLSLMP 81

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus} Length = 60

 Score = 39.9 bits (94), Expect = 4e-06
 Identities = 13/54 (24%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
             +D+   +     +  ++G  L L  + ++DWW+  R +G    VP  Y+ V
Sbjct: 10 IAKFDYVGRSARE--LSFKKGASLLLYHRASEDWWEG-RHNGIDGLVPHQYIVV 60

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 42.3 bits (98), Expect = 4e-06
 Identities = 17/76 (22%), Positives = 29/76 (38%)

Query: 14  FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNGNRNN 73
           FD++  D + +  ++G+ L +  K  + WW    S GK   +P  YVE Y+  S      
Sbjct: 141 FDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASASVSAL 200

Query: 74  VENINPTMEKTRSYSE 89
           +               
Sbjct: 201 IGGNQEGSHPQPLGGP 216

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A Length = 304

 Score = 36.5 bits (83), Expect = 5e-04
 Identities = 10/62 (16%), Positives = 27/62 (43%), Gaps = 1/62 (1%)

Query: 1   MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV 60
           ++   +  +V+     +  D   + ++ GE + + K      W+    +GK  + P ++V
Sbjct: 233 LQNGPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEG-ECNGKRGHFPFTHV 291

Query: 61  EV 62
            +
Sbjct: 292 RL 293

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens} Length = 450

 Score = 42.4 bits (99), Expect = 5e-06
 Identities = 10/61 (16%), Positives = 22/61 (36%), Gaps = 5/61 (8%)

Query: 2   ELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
             + + L+ L D+           + +G++  L     +  W V    G    VP+  + 
Sbjct: 280 SNKPIILRALCDYK-----QDQKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLI 334

Query: 62  V 62
           +
Sbjct: 335 I 335

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 72

 Score = 40.0 bits (94), Expect = 5e-06
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
             +D+   T     +  ++G  L L ++ + DWW+  R +G    +P  Y+ V  
Sbjct: 13 IAKFDYVGRTARE--LSFKKGASLLLYQRASDDWWEG-RHNGIDGLIPHQYIVVQD 65

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens} Length = 69

 Score = 39.5 bits (93), Expect = 6e-06
 Identities = 18/61 (29%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          + LYD+     D   + +  G+ L +I +    WW V   +G+  +VP SY+E     S+
Sbjct: 12 RALYDYTAQNPDE--LDLSAGDILEVILEGEDGWWTV-ERNGQRGFVPGSYLEKLSGPSS 68

Query: 69 G 69
          G
Sbjct: 69 G 69

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 88

 Score = 40.2 bits (94), Expect = 6e-06
 Identities = 7/65 (10%), Positives = 25/65 (38%), Gaps = 1/65 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          K +        D   + ++ G+ + + +      W+    +G+    P ++V+++   + 
Sbjct: 20 KAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEG-EVNGRKGLFPFTHVKIFDPQNP 78

Query: 69 GNRNN 73
              +
Sbjct: 79 DENES 83

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A Length = 67

 Score = 39.6 bits (93), Expect = 6e-06
 Identities = 7/54 (12%), Positives = 22/54 (40%), Gaps = 1/54 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          K +        D   + ++ G+ + + +      W+    +G+    P ++V++
Sbjct: 5  KAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEG-EVNGRKGLFPFTHVKI 57

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A Length = 86

 Score = 40.1 bits (94), Expect = 7e-06
 Identities = 14/64 (21%), Positives = 37/64 (57%), Gaps = 4/64 (6%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEV 62
          +D+ +  LYD++    +   +  Q+G+++ +++++  +WW+    ++ K  Y+P++YV  
Sbjct: 24 EDIIVVALYDYEAIHHED--LSFQKGDQMVVLEESG-EWWKARSLATRKEGYIPSNYVAR 80

Query: 63 YKKL 66
             L
Sbjct: 81 VDSL 84

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 39.3 bits (92), Expect = 9e-06
 Identities = 10/61 (16%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQV-IRSSGKPFYVPASYVEVYKKLSN 68
            +          +  ++G+ + +++   NK W++V   +SG+   + A  +      S+
Sbjct: 23 KCEHTRPKPGE--LAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERSGPSS 80

Query: 69 G 69
          G
Sbjct: 81 G 81

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A Length = 230

 Score = 41.4 bits (96), Expect = 9e-06
 Identities = 17/55 (30%), Positives = 28/55 (50%)

Query: 14  FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
           FD++  D + +  ++G+ L +  K  + WW    S GK   +P  YVE Y+  S 
Sbjct: 143 FDFNGNDEEDLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASA 197

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1 Length = 71

 Score = 39.2 bits (92), Expect = 1e-05
 Identities = 11/57 (19%), Positives = 29/57 (50%), Gaps = 3/57 (5%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKKL 66
           Y+F  + +    +   +G+ L ++  T + +W++     G+   +PA+YV+  + +
Sbjct: 17 KYNFHGTAEQD--LPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREGV 71

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae} Length = 59

 Score = 38.7 bits (91), Expect = 1e-05
 Identities = 16/57 (28%), Positives = 26/57 (45%), Gaps = 3/57 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYK 64
            LYDF+    D + +R+ EG+ +F+  K  + W      S  K   VP  +V   +
Sbjct: 5  VALYDFE-PENDNE-LRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQ 59

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus} Length = 109

 Score = 39.8 bits (93), Expect = 1e-05
 Identities = 17/59 (28%), Positives = 32/59 (54%), Gaps = 3/59 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKL 66
            LYD++  T +   +  ++GE+  +I  T  DWW+    ++GK  Y+P++YV     +
Sbjct: 31 VALYDYEARTTED--LSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPADSI 87

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus} Length = 70

 Score = 38.7 bits (91), Expect = 1e-05
 Identities = 12/62 (19%), Positives = 27/62 (43%), Gaps = 3/62 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYKKLS 67
            L+ +     +   + +Q+GE + ++ K    W + +   +G+    P+ YV      S
Sbjct: 11 VALHTYSAHRPEE--LDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVSGPS 68

Query: 68 NG 69
          +G
Sbjct: 69 SG 70

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A 1qwf_A 1prl_C ... Length = 84

 Score = 38.9 bits (91), Expect = 2e-05
 Identities = 14/57 (24%), Positives = 30/57 (52%), Gaps = 3/57 (5%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEVYKKL 66
          LYD++ +      +   +GEK  +++    DWW+    ++G+  Y+P++YV     +
Sbjct: 12 LYDYNATRWTD--LSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVDSI 66

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ... Length = 452

 Score = 40.5 bits (95), Expect = 2e-05
 Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 4/64 (6%)

Query: 6  VTLKV-LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEVY 63
          VT  V LYD++  T+    +  ++GE+L ++  T  DWW     S+G+  Y+P++YV   
Sbjct: 2  VTTFVALYDYESRTETD--LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPS 59

Query: 64 KKLS 67
            + 
Sbjct: 60 DSIQ 63

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens} Length = 69

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 2/55 (3%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          T+  LYD+  +  D   + I  G+ + +  K N+DWW      G+  Y PA++V 
Sbjct: 8  TVVALYDYTANRSDE--LTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVA 60

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 38.4 bits (90), Expect = 2e-05
 Identities = 14/61 (22%), Positives = 32/61 (52%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            LY F     +   + ++ G+ + L++ +N+DWW+  +   +  + PA++V+     S+
Sbjct: 11 VALYKFVPQENED--LEMRPGDIITLLEDSNEDWWKG-KIQDRIGFFPANFVQRLSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} PDB: 3h0i_A 3h0f_A* Length = 73

 Score = 38.1 bits (89), Expect = 2e-05
 Identities = 16/52 (30%), Positives = 31/52 (59%), Gaps = 3/52 (5%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVE 61
          LYD++  T+D   +   +GEK  ++  +  DWW+    ++G+  Y+P++YV 
Sbjct: 21 LYDYEAITEDD--LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVA 70

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 76

 Score = 37.7 bits (88), Expect = 3e-05
 Identities = 10/54 (18%), Positives = 23/54 (42%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
             + +   T     +  + G+ L L ++ + DWW+    +G    +P  Y+ +
Sbjct: 14 VACFAYTGRTAQE--LSFRRGDVLRLHERASSDWWRG-EHNGMRGLIPHKYITL 64

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 71

 Score = 37.7 bits (88), Expect = 4e-05
 Identities = 8/62 (12%), Positives = 20/62 (32%), Gaps = 2/62 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVEVYKKLS 67
          + +  +     D   +   +G+   +  +    W  V    + +   +    VE     S
Sbjct: 11 RAILPYT-KVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVSGPS 69

Query: 68 NG 69
          +G
Sbjct: 70 SG 71

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 70

 Score = 37.6 bits (88), Expect = 4e-05
 Identities = 13/62 (20%), Positives = 32/62 (51%), Gaps = 3/62 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEVYKKLS 67
          + +Y +    +D   + ++EG+++ ++++ +  W+  V R + K    P +YV      S
Sbjct: 11 RAMYQYRPQNEDE--LELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPVSGPS 68

Query: 68 NG 69
          +G
Sbjct: 69 SG 70

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens} Length = 341

 Score = 40.0 bits (92), Expect = 4e-05
 Identities = 14/54 (25%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 14  FDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
           FD++      +  + G+ +FL+ + NKDW +     G     P S+V++ K   
Sbjct: 181 FDFTGNSKLELNFKAGDVIFLLSRINKDWLEG-TVRGATGIFPLSFVKILKDFP 233

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens} Length = 79

 Score = 37.7 bits (88), Expect = 4e-05
 Identities = 16/59 (27%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
          + L+DF  ++K    +  + G+ +FL+ + NKDW +     G     P S+V++ K   
Sbjct: 22 EALFDFTGNSKLE--LNFKAGDVIFLLSRINKDWLEG-TVRGATGIFPLSFVKILKDFP 77

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 68

 Score = 37.6 bits (88), Expect = 4e-05
 Identities = 16/61 (26%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          + LY F+  T D   +  +EG+ +++   ++ +WW+   S G+   +P++YV      S+
Sbjct: 11 RALYTFEPRTPDE--LYFEEGDIIYITDMSDTNWWKG-TSKGRTGLIPSNYVAEQSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 97

 Score = 37.9 bits (88), Expect = 5e-05
 Identities = 9/59 (15%), Positives = 21/59 (35%), Gaps = 6/59 (10%)

Query: 9  KVLYDFDYSTKDGKYVR------IQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
            L+D+D  T              +EG+ + +    + D +    +  +   +P + V 
Sbjct: 21 VALFDYDPLTMSPNPDAAEEELPFKEGQIIKVYGDKDADGFYRGETCARLGLIPCNMVS 79

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens} Length = 67

 Score = 37.3 bits (87), Expect = 5e-05
 Identities = 10/54 (18%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          +V+     +  D   + ++ GE + + K      W+    +GK  + P ++V +
Sbjct: 10 RVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEG-ECNGKRGHFPFTHVRL 62

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum} Length = 80

 Score = 37.3 bits (87), Expect = 6e-05
 Identities = 9/56 (16%), Positives = 25/56 (44%), Gaps = 2/56 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          + L D++  +     +  +  + + +  K  ++ W + + +GK    P  +VE+  
Sbjct: 14 RALKDYN-VSDTSL-LPFKRNDIITITFKDQENKWFMGQLNGKEGSFPVDHVEILL 67

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus} Length = 68

 Score = 36.8 bits (86), Expect = 7e-05
 Identities = 15/61 (24%), Positives = 30/61 (49%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          K L ++         ++  +G+ + L ++ +++W+Q    +G     PAS VEV    S+
Sbjct: 11 KALCNYRGKNPGD--LKFNKGDVILLRRQLDENWYQG-EINGVSGIFPASSVEVISGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 98

 Score = 37.4 bits (87), Expect = 8e-05
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 3/62 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            +YD+  + +D   +   +G+ + ++ K + DWWQ    +G     P++YV++    S 
Sbjct: 38 IAMYDYAANNEDE--LSFSKGQLINVMNKDDPDWWQG-EINGVTGLFPSNYVKMTTDSSG 94

Query: 69 GN 70
           +
Sbjct: 95 PS 96

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 81

 Score = 37.0 bits (86), Expect = 9e-05
 Identities = 12/56 (21%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          + ++D    T   + +  + G+ + ++  +NKDWW   +   +  + PAS+V ++ 
Sbjct: 14 EAVWDHV--TMANRELAFKAGDVIKVLDASNKDWWWG-QIDDEEGWFPASFVRLWV 66

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 69

 Score = 36.1 bits (84), Expect = 1e-04
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 2/64 (3%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
           T+K LYD+     D   +    G  +  + K    WW+    +    Y P++YVE    
Sbjct: 8  RTVKALYDYKAKRSDE--LTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDISG 65

Query: 66 LSNG 69
           S+G
Sbjct: 66 PSSG 69

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 78

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 17/61 (27%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            +YD+    K+ + +  QEG  +++IKK +  W++    +G     P +YVE     S+
Sbjct: 21 VAIYDYT-KDKEDE-LSFQEGAIIYVIKKNDDGWYEG-VMNGVTGLFPGNYVESISGPSS 77

Query: 69 G 69
          G
Sbjct: 78 G 78

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 96

 Score = 36.4 bits (84), Expect = 2e-04
 Identities = 8/58 (13%), Positives = 26/58 (44%), Gaps = 5/58 (8%)

Query: 9  KVLYDFDYSTKDGKY----VRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVE 61
             Y ++      +     + +  G+ L++    ++D +++     G+   VP+++V+
Sbjct: 21 VARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVD 78

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 92

 Score = 36.1 bits (83), Expect = 2e-04
 Identities = 10/56 (17%), Positives = 28/56 (50%), Gaps = 5/56 (8%)

Query: 12 YDFDYSTKDGKYVRIQEGEKLFLIKKT----NKDWWQVIRSSGKPFYVPASYVEVY 63
           + +++      V + EG+ + +IKK     +++ W +  +     +V +S+++ Y
Sbjct: 22 AERNFNAAQDLDVSLLEGDLVGVIKKKDPMGSQNRWLI-DNGVTKGFVYSSFLKPY 76

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A Length = 65

 Score = 35.5 bits (82), Expect = 2e-04
 Identities = 6/54 (11%), Positives = 17/54 (31%), Gaps = 2/54 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV-IRSSGKPFYVPASYVE 61
          + +  +     D   +   +G+   +  +    W  V    + +   +    VE
Sbjct: 9  RAILPYT-KVPDTDEISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVE 61

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus} Length = 73

 Score = 35.7 bits (83), Expect = 2e-04
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          K LYDF+    DG+ +  +EG+ + L  + +++W++     G+  + P SYV+V
Sbjct: 17 KALYDFE-PENDGE-LGFREGDLITLTNQIDENWYEG-MLHGQSGFFPLSYVQV 67

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens} Length = 68

 Score = 35.3 bits (82), Expect = 3e-04
 Identities = 15/65 (23%), Positives = 35/65 (53%), Gaps = 3/65 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          + LYDF+   +    +  +EG+ + L  + +++W++     G+  + P +YVEV   L +
Sbjct: 7  RGLYDFEPENQGE--LGFKEGDIITLTNQIDENWYEG-MIHGESGFFPINYVEVIVPLEH 63

Query: 69 GNRNN 73
           + ++
Sbjct: 64 HHHHH 68

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A Length = 68

 Score = 35.3 bits (82), Expect = 3e-04
 Identities = 13/61 (21%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          +  +DF   T     + +Q+G+ +++ K+ +++W++     G+    P +Y+E+    S+
Sbjct: 11 RAKFDFKAQTLKE--LPLQKGDIVYIYKQIDQNWYEG-EHHGRVGIFPRTYIELLSGPSS 67

Query: 69 G 69
          G
Sbjct: 68 G 68

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A Length = 64

 Score = 34.9 bits (81), Expect = 3e-04
 Identities = 10/55 (18%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEV 62
          + +YD+  +  + + V  ++G+ +  ++  +  W    ++ +G+   +PA+Y+E 
Sbjct: 10 RAMYDYS-AQDEDE-VSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEF 62

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens} Length = 119

 Score = 36.2 bits (83), Expect = 3e-04
 Identities = 10/56 (17%), Positives = 24/56 (42%), Gaps = 5/56 (8%)

Query: 9   KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWW--QVIRSSGKPFYVPASYVEV 62
             +Y+F  S      + +Q G+ + + +    DW+   +I+        P S++ +
Sbjct: 63  VAIYNFQGSGAPQ--LSLQIGDVVRIQET-CGDWYRGYLIKHKMLQGIFPKSFIHI 115

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} Length = 81

 Score = 35.4 bits (82), Expect = 3e-04
 Identities = 12/56 (21%), Positives = 23/56 (41%), Gaps = 5/56 (8%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--WWQVIRSSGKPFYVPASYVEV 62
          +VLYD+D    +   + +   E + +      D  W        +   VP +Y+E+
Sbjct: 21 RVLYDYD--AANSTELSLLADEVITVFSVVGMDSDWLMG-ERGNQKGKVPITYLEL 73

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A Length = 60

 Score = 34.8 bits (81), Expect = 3e-04
 Identities = 16/56 (28%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          + L+DF  ++K    +  + G+ +FL+ + NKDW +     G     P S+V++ K
Sbjct: 8  EALFDFTGNSKLE--LNFKAGDVIFLLSRINKDWLEG-TVRGATGIFPLSFVKILK 60

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B Length = 454

 Score = 36.6 bits (85), Expect = 5e-04
 Identities = 13/57 (22%), Positives = 33/57 (57%), Gaps = 4/57 (7%)

Query: 11 LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKL 66
          LYD++    +   +  Q+G+++ +++++  +WW+    ++ K  Y+P++YV     L
Sbjct: 14 LYDYEAIHHED--LSFQKGDQMVVLEESG-EWWKARSLATRKEGYIPSNYVARVDSL 67

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 Length = 535

 Score = 36.0 bits (83), Expect = 7e-04
 Identities = 17/58 (29%), Positives = 32/58 (55%), Gaps = 3/58 (5%)

Query: 11  LYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKLS 67
           LYD++  T+    +  ++GE+L ++  T  DWW     S+G+  Y+P++YV     + 
Sbjct: 91  LYDYESRTETD--LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDSIQ 146

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens} Length = 65

 Score = 34.1 bits (79), Expect = 8e-04
 Identities = 14/54 (25%), Positives = 31/54 (57%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          ++ +DF   +     + +Q+G+ +++ K+ +K+W +     G+    PA+YVEV
Sbjct: 5  RLKFDFQAQSPKE--LTLQKGDIVYIHKEVDKNWLEG-EHHGRLGIFPANYVEV 55

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1 Length = 80

 Score = 34.3 bits (79), Expect = 9e-04
 Identities = 14/58 (24%), Positives = 29/58 (50%), Gaps = 6/58 (10%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYV---PASYVEV 62
          +V   +  S  +   + +  G+ + ++KK    WWQ  +++ GK       PAS+V++
Sbjct: 11 QVTSAYVASGSE--QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKL 66

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	101
2lx7_A	60	GAS-7, growth arrest-specific protein 7; structura	99.83
2lj0_A	65	Sorbin and SH3 domain-containing protein 1; R85FL,	99.8
2b86_A	67	Cytoplasmic protein NCK2; NCK SH3 domain, signalin	99.77
1b07_A	65	Protein (proto-oncogene CRK (CRK)); SH3 domain, in	99.76
1cka_A	57	C-CRK N-terminal SH3 domain; complex (oncogene pro	99.76
2dl4_A	68	Protein STAC; SH3 domain, STAC protein, SRC homolo	99.75
2ew3_A	68	SH3-containing GRB2-like protein 3; SH3GL3, soluti	99.75
1gl5_A	67	Tyrosine-protein kinase TEC; transferase, ATP-bind	99.75
2nwm_A	65	Vinexin; cell adhesion; NMR {Homo sapiens}	99.75
1w70_A	60	Neutrophil cytosol factor 4; NADPH oxidase, P40PHO	99.74
2ydl_A	69	SH3 domain-containing kinase-binding protein 1; si	99.74
1k4u_S	62	Phagocyte NADPH oxidase subunit P67PHOX; SH3-pepti	99.74
1csk_A	71	C-SRC SH3 domain; phosphotransferase; 2.50A {Homo	99.74
2dmo_A	68	Neutrophil cytosol factor 2; SH3 domain, structura	99.74
2fpe_A	62	C-JUN-amino-terminal kinase interacting protein 1;	99.74
2g6f_X	59	RHO guanine nucleotide exchange factor 7; SH3 doma	99.74
2ak5_A	64	RHO guanine nucleotide exchange factor 7; adaptor	99.74
1u5s_A	71	Cytoplasmic protein NCK2; protein-protein complex,	99.74
1uti_A	58	GRB2-related adaptor protein 2; signaling protein	99.74
3thk_A	73	Spectrin alpha chain, brain; SH3 domain, chimera,	99.74
2drm_A	58	Acanthamoeba myosin IB; SH3 domain, contractIle pr	99.74
2jt4_A	71	Cytoskeleton assembly control protein SLA1; endocy	99.74
1i07_A	60	Epidermal growth factor receptor kinase substrate	99.73
2bz8_A	58	SH3-domain kinase binding protein 1; SH3 domain, C	99.73
1jo8_A	58	ABP1P, actin binding protein; SH3 domain actin-bin	99.73
1x2k_A	68	OSTF1, osteoclast stimulating factor 1; SH3 domain	99.73
1wxt_A	68	Hypothetical protein FLJ21522; SH3 domain, EPS8-re	99.73
2fpf_A	71	C-JUN-amino-terminal kinase interacting protein 1;	99.73
2jw4_A	72	Cytoplasmic protein NCK1; SH3 domain, phosphorylat	99.73
2vwf_A	58	Growth factor receptor-bound protein 2; polymorphi	99.73
2xmf_A	60	Myosin 1E SH3; motor protein, SH3 domain; HET: DIA	99.73
2lcs_A	73	NAP1-binding protein 2; adaptor, transferase, sign	99.73
1sem_A	58	SEM-5; SRC-homology 3 (SH3) domain, peptide-bindin	99.73
1zx6_A	58	YPR154WP; SH3 domain, protein binding; 1.60A {Sacc	99.73
2fei_A	65	CD2-associated protein; CMS SH3 domain, structural	99.73
2bzy_A	67	CRK-like protein, CRKL SH3C; SH3 domain, dimer, nu	99.73
2k2m_A	68	EPS8-like protein 1; alternative splicing, coiled	99.73
2dl3_A	68	Sorbin and SH3 domain-containing protein 1; ponsin	99.73
2djq_A	68	SH3 domain containing ring finger 2; MUS musculus	99.73
2dl8_A	72	SLIT-ROBO RHO GTPase-activating protein 2; SH3 dom	99.73
2dl5_A	78	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.73
3eg3_A	63	Proto-oncogene tyrosine-protein kinase ABL1; beta,	99.73
2ebp_A	73	SAM and SH3 domain-containing protein 1; proline-g	99.73
1wyx_A	69	CRK-associated substrate; beta sheets, cell adhesi	99.73
3cqt_A	79	P59-FYN, proto-oncogene tyrosine-protein kinase FY	99.72
2v1q_A	60	SLA1, cytoskeleton assembly control protein SLA1;	99.72
1yn8_A	59	NBP2, NAP1-binding protein 2; SH3 domain, unknown	99.72
2iim_A	62	Proto-oncogene tyrosine-protein kinase LCK; beta-b	99.72
2cre_A	71	HEF-like protein; SH3 domain, SRC homology 3 domai	99.72
2dl7_A	73	KIAA0769 protein; SH3 domain, FCHSD2, structural g	99.72
3ulr_B	65	SRC substrate cortactin; SH3, protein-protein inte	99.72
3c0c_A	73	Endophilin-A2; endocytosis, SH3, voltage-gated cal	99.72
2eqi_A	69	Phospholipase C, gamma 2; SH3 domain, PLCG2, struc	99.72
2epd_A	76	RHO GTPase-activating protein 4; SH3 domain, struc	99.72
2o9s_A	67	Ponsin; SH3 domain, signaling protein; 0.83A {Homo	99.72
1x2p_A	68	Protein arginine N-methyltransferase 2; SH3 domain	99.72
2ekh_A	80	SH3 and PX domain-containing protein 2A; SH3 domai	99.72
3h0h_A	73	Proto-oncogene tyrosine-protein kinase FYN; beta b	99.72
1oot_A	60	Hypothetical 40.4 kDa protein in PES4-His2 interge	99.72
2jte_A	64	CD2-associated protein; SH3 domain, coiled coil, c	99.72
1s1n_A	68	Nephrocystin 1; beta barrel, cell adhesion; NMR {H	99.72
3ngp_A	62	Spectrin alpha chain, brain; beta barrel, structur	99.72
2gnc_A	60	SLIT-ROBO RHO GTPase-activating protein 1; beta ba	99.72
2j6f_A	62	CD2-associated protein; metal-binding, immune resp	99.72
1y0m_A	61	1-phosphatidylinositol-4,5-bisphosphate phosphodie	99.72
2ct3_A	70	Vinexin; SH3 domian, structural genomics, NPPSFA,	99.72
2da9_A	70	SH3-domain kinase binding protein 1; structural ge	99.72
2enm_A	77	Sorting nexin-9; SH3-like barrel, protein transpor	99.72
2eyx_A	67	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.72
1z9q_A	79	Neutrophil cytosol factor 4; oxidoreductase activa	99.72
2i0n_A	80	Class VII unconventional myosin; beta-sheet loop,	99.72
2vkn_A	70	Protein SSU81; membrane, SH3 domain, transmembrane	99.72
2d8j_A	77	FYN-related kinase; SH3 domain, structural genomic	99.71
2x3w_D	60	Syndapin I, protein kinase C and casein kinase sub	99.71
4e6r_A	58	Cytoplasmic protein NCK2; SH3 domain, protein bind	99.71
2dbm_A	73	SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH	99.71
4esr_A	69	Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domai	99.71
2ysq_A	81	RHO guanine nucleotide exchange factor 9; SH3 doma	99.71
2ed1_A	76	130 kDa phosphatidylinositol 4,5-biphosphate- depe	99.71
1uj0_A	62	Signal transducing adaptor molecule (SH3 domain an	99.71
1zlm_A	58	Osteoclast stimulating factor 1; beta barrel, sign	99.71
2ed0_A	78	ABL interactor 2; coiled coil, cytoskeleton, nucle	99.71
1wxb_A	68	Epidermal growth factor receptor pathway substrate	99.71
1ruw_A	69	Myosin-3 isoform, MYO3; SH3 domain, yeast, high-th	99.71
2pqh_A	80	Spectrin alpha chain, brain; SH3 domain, chimera,	99.71
1tg0_A	68	BBC1 protein, myosin tail region-interacting prote	99.71
2yuo_A	78	CIP85, RUN and TBC1 domain containing 3; structura	99.71
2dbk_A	88	CRK-like protein; structural genomics, NPPSFA, nat	99.71
2yuq_A	85	Tyrosine-protein kinase ITK/TSK; T-cell-specific k	99.71
4ag1_C	84	Fynomer; hydrolase-de novo protein complex, inhibi	99.71
1wx6_A	91	Cytoplasmic protein NCK2; SH3 domain, structural g	99.71
2oaw_A	65	Spectrin alpha chain, brain; SH3 domain, chimera,	99.71
1uhc_A	79	KIAA1010 protein; beta barrel, SH3, human cDNA, st	99.71
2j05_A	65	RAS GTPase-activating protein 1; GTPase activation	99.71
1neg_A	83	Spectrin alpha chain, brain; SH3-domain fold, five	99.71
2dm1_A	73	Protein VAV-2; RHO family guanine nucleotide excha	99.7
2cub_A	88	Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor	99.7
1w1f_A	65	Tyrosine-protein kinase LYN; SH3-domain, SH3 domai	99.7
1zuu_A	58	BZZ1 protein; SH3 domain, unknown function; 0.97A	99.7
2ecz_A	70	Sorbin and SH3 domain-containing protein 1; glycop	99.7
1x6g_A	81	Megakaryocyte-associated tyrosine-protein kinase;	99.7
2k9g_A	73	SH3 domain-containing kinase-binding protein 1; CI	99.7
2yun_A	79	Nostrin; nitric oxide synthase trafficker, structu	99.7
4f14_A	64	Nebulette; SH3 domain, heart muscle, actin-binding	99.7
2ege_A	75	Uncharacterized protein KIAA1666; SH3 domain, KIAA	99.7
2ct4_A	70	CDC42-interacting protein 4; thyroid receptor inte	99.7
1x69_A	79	Cortactin isoform A; SH3 domain, CTTN, oncogene EM	99.7
2l0a_A	72	STAM-1, signal transducing adapter molecule 1; str	99.7
2a28_A	54	BZZ1 protein; SH3 domain, signaling protein; 1.07A	99.7
2dlp_A	85	KIAA1783 protein; SH3 domain, structural genomics,	99.7
2dnu_A	71	RUH-061, SH3 multiple domains 1; RSGI, structural	99.7
1ue9_A	80	Intersectin 2; beta barrel, SH3 domain, riken stru	99.7
2egc_A	75	SH3 and PX domain-containing protein 2A; SH3 domai	99.7
1x2q_A	88	Signal transducing adapter molecule 2; SH3 domain,	99.7
3u23_A	65	CD2-associated protein; structural genomics, struc	99.7
2dil_A	69	Proline-serine-threonine phosphatase-interacting p	99.7
2gqi_A	71	RAS GTPase-activating protein 1; GAP, RAS P21 prot	99.69
2rf0_A	89	Mitogen-activated protein kinase kinase kinase 10;	99.69
1uhf_A	69	Intersectin 2; beta barrel, SH3 domain, riken stru	99.69
1zuy_A	58	Myosin-5 isoform; SH3 domain, contractIle protein;	99.69
1spk_A	72	RSGI RUH-010, riken cDNA 1300006M19; structural ge	99.69
3rnj_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.69
1nm7_A	69	Peroxisomal membrane protein PAS20; yeast, PEX5P,	99.69
2cud_A	79	SRC-like-adapter; SH3 domain, negative mitogenesis	99.69
1x43_A	81	Endophilin B1, SH3 domain GRB2-like protein B1; st	99.69
1wi7_A	68	SH3-domain kinase binding protein 1; beta barrel,	99.69
4glm_A	72	Dynamin-binding protein; SH3 domain, DNMBP, struct	99.69
1ugv_A	72	KIAA0621, olygophrenin-1 like protein; beta barrel	99.69
2kxc_A	67	Brain-specific angiogenesis inhibitor 1-associate	99.69
1aww_A	67	ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linke	99.69
2jxb_A	86	T-cell surface glycoprotein CD3 epsilon chain, cyt	99.68
1ujy_A	76	RHO guanine nucleotide exchange factor 6; structur	99.68
2cuc_A	70	SH3 domain containing ring finger 2; structural ge	99.68
2d8h_A	80	SH3YL1 protein; SH3 domain, hypothetical protein S	99.68
1gbq_A	74	GRB2; complex (signal transduction/peptide), SH3 d	99.68
2oi3_A	86	Tyrosine-protein kinase HCK; human HCK, SH3, SRC-t	99.68
1uff_A	93	Intersectin 2; beta barrel, SH3 domain, endocytosi	99.68
1x6b_A	79	RHO guanine exchange factor (GEF) 16; SH3 domain,	99.68
1j3t_A	74	Intersectin 2; beta barrel, SH3 domain, riken stru	99.68
2o2o_A	92	SH3-domain kinase-binding protein 1; CIN85, protei	99.67
2ega_A	70	SH3 and PX domain-containing protein 2A; SH3 domai	99.67
2ke9_A	83	Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosp	99.67
2kgt_A	72	Tyrosine-protein kinase 6; SH3 domain, SRC kinase,	99.67
2yup_A	90	Vinexin; sorbin and SH3 domain-containing protein	99.67
3i5r_A	83	Phosphatidylinositol 3-kinase regulatory subunit a	99.67
2csi_A	76	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.67
1wie_A	96	RIM binding protein 2; beta barrel, KIAA0318 prote	99.67
2kym_A	120	BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI	99.67
2kxd_A	73	11-MER peptide, SH3 domain of spectrin alpha CHAI;	99.67
1i1j_A	108	Melanoma derived growth regulatory protein; SH3 su	99.66
2yt6_A	109	Adult MALE urinary bladder cDNA, riken FULL- lengt	99.66
3reb_B	90	Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain	99.66
2v1r_A	80	Peroxisomal membrane protein PAS20; protein transp	99.65
2csq_A	97	RIM-BP2, RIM binding protein 2; SH3 domain, struct	99.65
2e5k_A	94	Suppressor of T-cell receptor signaling 1; SH3 dom	99.64
1wxu_A	93	Peroxisomal biogenesis factor 13; SH3 domain, PEX1	99.64
1jqq_A	92	PEX13P, peroxisomal membrane protein PAS20, PAS20P	99.63
2m0y_A	74	Dedicator of cytokinesis protein 1; apoptosis; NMR	99.63
3o5z_A	90	Phosphatidylinositol 3-kinase regulatory subunit;	99.63
1awj_A	77	ITK; transferase, regulatory intramolecular comple	99.63
1udl_A	98	Intersectin 2, KIAA1256; beta barrel, SH3 domain,	99.62
2rqv_A	108	BUD emergence protein 1; BEM1P, SH3, CDC42P, cytop	99.62
2kbt_A	142	Chimera of proto-oncogene VAV, linker, immunoglobu	99.6
1hsq_A	71	Phospholipase C-gamma (SH3 domain); phosphoric die	99.6
3qwx_X	174	Cell death abnormality protein 2; cell engulfment,	99.6
1bb9_A	115	Amphiphysin 2; transferase, SH3 domain; 2.20A {Rat	99.58
2rqr_A	119	CED-12 homolog, engulfment and cell motility prote	99.58
1gcq_C	70	VAV proto-oncogene; SH3 domain, protein-protein co	99.57
1mv3_A	213	MYC box dependent interacting protein 1; tumor sup	99.55
1k1z_A	78	VAV; SH3, proto-oncogene, signaling protein; NMR {	99.55
3jv3_A	283	Intersectin-1; SH3 domain, DH domain, guanine nucl	99.55
4d8k_A	175	Tyrosine-protein kinase LCK; protein kinases, SH2	99.53
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.53
2dvj_A	230	V-CRK sarcoma virus CT10 oncogene homolog, isoform	99.52
1u3o_A	82	Huntingtin-associated protein-interacting protein;	99.51
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.51
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.5
1k9a_A	450	Carboxyl-terminal SRC kinase; COOH-terminal SRC ki	99.47
1v1c_A	71	Obscurin; muscle, sarcomere, adapter, myogenesis,	99.46
2pz1_A	466	RHO guanine nucleotide exchange factor 4; helical	99.46
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	99.45
3a98_A	184	DOCK2, dedicator of cytokinesis protein 2; protein	99.44
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.43
1ng2_A	193	Neutrophil cytosolic factor 1; P47PHOX, autoinhibi	99.43
1fmk_A	452	C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyros	99.42
2h8h_A	535	Proto-oncogene tyrosine-protein kinase SRC; SRC ki	99.42
2eyz_A	304	V-CRK sarcoma virus CT10 oncogene homolog isoform	99.39
1tuc_A	63	Alpha-spectrin; capping protein, calcium-binding,	99.39
1ri9_A	102	FYN-binding protein; SH3-like, helically extended,	99.38
1gri_A	217	Growth factor bound protein 2; SH2, SH3, signal tr	99.38
1qcf_A	454	Haematopoetic cell kinase (HCK); tyrosine kinase-i	99.37
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.06
2de0_X	526	Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltran	99.36
1opk_A	495	P150, C-ABL, proto-oncogene tyrosine-protein kinas	99.36
2lqn_A	303	CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT	99.05
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	99.34
1kjw_A	295	Postsynaptic density protein 95; protein-protein i	99.3
3haj_A	486	Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR,	99.27
3qwy_A	308	Cell death abnormality protein 2; cell engulfment,	99.25
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	99.24
2gtj_A	96	FYN-binding protein; SH3, redox, signaling protein	99.23
4dey_A	337	Voltage-dependent L-type calcium channel subunit;	99.21
3pvl_A	655	Myosin VIIA isoform 1; protein complex, novel fold	99.17
3pe0_A	283	Plectin; cytoskeleton, plakin, spectrin repeat, SH	99.09
3tsz_A	391	Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffol	99.05
3kfv_A	308	Tight junction protein ZO-3; structural genomics c	99.04
2xkx_A	721	Disks large homolog 4; structural protein, scaffol	99.02
1ug1_A	92	KIAA1010 protein; structural genomics, SH3 domain,	98.97
3shw_A	468	Tight junction protein ZO-1; PDZ-SH3-GUK supramodu	98.96
3tvt_A	292	Disks large 1 tumor suppressor protein; DLG, SRC-h	98.94
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	98.92
3r6n_A	450	Desmoplakin; spectrin repeat, SH3 domain, cell adh	98.76
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	98.53
2dyb_A	341	Neutrophil cytosol factor 4; P40(PHOX), NADPH oxid	97.74
2krs_A	74	Probable enterotoxin; all beta, SH3, ENTD, CPF_058	96.71
2kt8_A	76	Probable surface protein; SH3 family, structural g	96.7
2kq8_A	70	Cell WALL hydrolase; GFT protein structure, NESG,	95.93
1g2b_A	62	Spectrin alpha chain; capping protein, calcium-bin	94.71
1wfw_A	74	Kalirin-9A; SH3 domain, neuron-specific GDP/GTP ex	94.63
2jmc_A	77	Spectrin alpha chain, brain and P41 peptide chimer	94.38
3npf_A	306	Putative dipeptidyl-peptidase VI; structural genom	93.61
3cxl_A	463	N-chimerin; SH2, RHO-GAP, structural genomics cons	87.97
3h41_A	311	NLP/P60 family protein; NLPC/P60 family protein, s	84.06
3h8z_A	128	FragIle X mental retardation syndrome-related Pro;	83.85
3m1u_A	434	Putative gamma-D-glutamyl-L-diamino acid endopept;	80.9
3npf_A	306	Putative dipeptidyl-peptidase VI; structural genom	80.27

>2lx7_A GAS-7, growth arrest-specific protein 7; structural genomics, northeast structural genomics consortiu target HR8574A, PSI-biology; NMR {Homo sapiens}

Probab=99.83  E-value=7.8e-21  Score=105.96  Aligned_cols=57  Identities=26%  Similarity=0.560  Sum_probs=51.0

Q ss_pred             cEEEEEEeccCCCCCCCCC-ccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKY-VRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~e-Ls~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      +..|+|+|||+++.++  + |+|++||+|.|+++.+++||.++..+|+.|+||+|||+.+
T Consensus         3 g~~~rAlydy~~~~~~--e~Ls~~~Gd~i~v~~~~~~~Ww~g~~~~G~~G~fP~nyVe~i   60 (60)
T 2lx7_A            3 GARCRTLYPFSGERHG--QGLRFAAGELITLLQVPDGGWWEGEKEDGLRGWFPASYVQLL   60 (60)
T ss_dssp             SCEEEESCCCCSCCCS--SCCCCCTTCEEEBSCCCTTSCEEEECTTSCEEEECGGGEEEC
T ss_pred             CCEEEECcccCCCCCC--CCccCCCCCEEEEeEecCCCeEEEEeCCCCEEEEcHHHEEEC
Confidence            3468999999988766  6 9999999999999988899999987789999999999864

>2lj0_A Sorbin and SH3 domain-containing protein 1; R85FL, ponsin, CAP, signaling protein; NMR {Homo sapiens} PDB: 2lj1_A

Probab=99.80  E-value=3.1e-19  Score=100.91  Aligned_cols=57  Identities=16%  Similarity=0.354  Sum_probs=51.2

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~   63 (101)
                      -..++|||||+++.++  ||+|++||+|.|+++.+++||.++. .+|+.|+||+|||+++
T Consensus         6 ~~~~~Alydy~a~~~~--ELs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~nyVe~l   63 (65)
T 2lj0_A            6 LFSYQALYSYIPQNDD--ELELRDGDIVDVMEKCDDGWFVGTSRRTKQFGTFPGNYVKPL   63 (65)
T ss_dssp             SCEEEESSCBCCSSTT--BCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEETTSEEEC
T ss_pred             CEEEEEceeECCCCcC--CcCCCCCCEEEEeEeCCCCEEEEEECCCCCEEEEehhHeEEE
Confidence            3468999999998777  9999999999999998899999987 4589999999999875

>2b86_A Cytoplasmic protein NCK2; NCK SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2js2_A

Probab=99.77  E-value=9.3e-19  Score=99.42  Aligned_cols=60  Identities=27%  Similarity=0.615  Sum_probs=51.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      .+.+++|+|||+++..+  +|+|++||+|.|++++ ++||.+++.+|+.|+||+|||+.+.+.
T Consensus         3 ~~~~~~Alydy~a~~~~--ELsf~~Gd~i~vl~~~-~~Ww~~~~~~g~~G~~Psnyv~~~~~~   62 (67)
T 2b86_A            3 EEVIVIAKWDYTAQQDQ--ELDIKKNERLWLLDDS-KTWWRVRNAANRTGYVPSNYVERKLEH   62 (67)
T ss_dssp             CCEEEEESSCBCCSSTT--SCCBCTTCEEEEEECS-SSSCEEECTTSCEEECCCCSEEEC---
T ss_pred             CCeEEEEeeeECCCCCC--ccccCCCCEEEEEecC-CCeEEEEeCCCCEEEeChHHEeEcCCC
Confidence            45689999999998777  9999999999999985 689999977899999999999987653

>1b07_A Protein (proto-oncogene CRK (CRK)); SH3 domain, inhibitors, peptoids, protein-protein recognition, proline-rich motifs, signal transduction; 2.50A {Mus musculus} SCOP: b.34.2.1

Probab=99.76  E-value=2e-18  Score=97.31  Aligned_cols=58  Identities=28%  Similarity=0.615  Sum_probs=52.1

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|+|+|+++..+  +|+|++||+|.|+++.+++||.+++.+|+.|+||++||+.+.+
T Consensus         4 ~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   61 (65)
T 1b07_A            4 EYVRALFDFNGNDEE--DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYHH   61 (65)
T ss_dssp             CEEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEECC-
T ss_pred             eEEEECCcCCCCCCC--ccCCcCCCEEEEEEecCCCeEEEEECCCCEEEEChHHEeecCC
Confidence            468999999988777  9999999999999998889999997789999999999987654

>1cka_A C-CRK N-terminal SH3 domain; complex (oncogene protein/peptide); 1.50A {Mus musculus} SCOP: b.34.2.1 PDB: 1ckb_A 1m3c_A 1m30_A 1m3b_A 1m3a_A

Probab=99.76  E-value=2.6e-18  Score=94.24  Aligned_cols=54  Identities=28%  Similarity=0.617  Sum_probs=49.8

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      +++|+|+|+++.++  +|+|++||+|.|+++.+++||.+++.+|+.|+||++||+.
T Consensus         3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~   56 (57)
T 1cka_A            3 YVRALFDFNGNDEE--DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             EEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred             EEEECCcCCCCCCC--CCCCCCCCEEEEEEecCCCcEEEEeCCCCEEEEeHHHEEE
Confidence            57999999988777  9999999999999998889999997789999999999975

>2dl4_A Protein STAC; SH3 domain, STAC protein, SRC homology 3, cysteine-rich domain protein, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.75  E-value=5.5e-18  Score=96.13  Aligned_cols=61  Identities=23%  Similarity=0.475  Sum_probs=53.9

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccccC
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS   67 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~   67 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+...+
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~~~   66 (68)
T 2dl4_A            6 SGNTYVALYKFVPQENE--DLEMRPGDIITLLEDSNEDWWKGKI-QDRIGFFPANFVQRLSGPS   66 (68)
T ss_dssp             CCCEEEESSCCCCSSTT--BCCCCTTCEEEEEECCCSSEEEEEC-SSCEEEEETTTEEECCCCC
T ss_pred             CCCEEEEeeeECCCCcC--CcCCCCCCEEEEEEeCCCCEEEEEE-CCcEEEEehHHeEECCCCC
Confidence            44578999999988777  9999999999999998889999995 8899999999999887643

>2ew3_A SH3-containing GRB2-like protein 3; SH3GL3, solution structure, signaling protein; NMR {Homo sapiens}

Probab=99.75  E-value=3.3e-18  Score=97.25  Aligned_cols=58  Identities=24%  Similarity=0.531  Sum_probs=52.6

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|+++.++  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus         3 ~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   60 (68)
T 2ew3_A            3 QPCCRGLYDFEPENQG--ELGFKEGDIITLTNQIDENWYEGMI-HGESGFFPINYVEVIVP   60 (68)
T ss_dssp             CCEEEESSCBCCCSTT--BCCBCTTCEEEEEEESSSSEEEEEE-TTEEEEEEGGGEEESCC
T ss_pred             CCEEEEeeeECCCCCC--ccCCCCCCEEEEEEecCCCEEEEEE-CCcEEEeeHHHEEEcCc
Confidence            4578999999988777  9999999999999998889999997 89999999999998755

>1gl5_A Tyrosine-protein kinase TEC; transferase, ATP-binding, SH3 domain, phosphorylation; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.75  E-value=4.2e-18  Score=96.32  Aligned_cols=56  Identities=23%  Similarity=0.613  Sum_probs=51.4

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ..++|+|+|.++..+  +|+|++||+|.|+.+.+++||.+++.+|+.|+||++||+.+
T Consensus         3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~   58 (67)
T 1gl5_A            3 EIVVAMYDFQATEAH--DLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGK   58 (67)
T ss_dssp             SCEEECSCBCCSSSS--BCCBCTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESS
T ss_pred             eEEEECccCCCCCCC--eecCCcCCEEEEEEccCCCcEEEEECCCCEEEEEhHhEEEc
Confidence            358999999988777  99999999999999988899999977899999999999986

>2nwm_A Vinexin; cell adhesion; NMR {Homo sapiens}

Probab=99.75  E-value=5.7e-18  Score=95.50  Aligned_cols=56  Identities=25%  Similarity=0.527  Sum_probs=51.1

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .++|+|+|.++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus         3 ~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~fP~~yv~~~~~   58 (65)
T 2nwm_A            3 AARLKFDFQAQSPK--ELTLQKGDIVYIHKEVDKNWLEGEH-HGRLGIFPANYVEVLPL   58 (65)
T ss_dssp             EEEECSCBCCCSTT--BCCBCTTCEEEEEECCTTTCEEEEE-TTEEEEECGGGEEECCC
T ss_pred             EEEEeeeECCCCcC--ccCCcCCCEEEEEEecCCCEEEEEE-CCcEEEEehhhEEEcCC
Confidence            58999999988777  9999999999999998889999995 89999999999998764

>1w70_A Neutrophil cytosol factor 4; NADPH oxidase, P40PHOX, P47PHOX, SH3 domain, polyproline; 1.46A {Homo sapiens} PDB: 1w6x_A

Probab=99.74  E-value=4.8e-18  Score=94.15  Aligned_cols=57  Identities=26%  Similarity=0.543  Sum_probs=51.4

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      +...++|+|+|+++.++  +|+|++||++.|+++.+++||.++. +|+.|+||++||+.+
T Consensus         3 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~l   59 (60)
T 1w70_A            3 KHMRAEALFDFTGNSKL--ELNFKAGDVIFLLSRINKDWLEGTV-RGATGIFPLSFVKIL   59 (60)
T ss_dssp             CSCEEEESSCBCCSSTT--BCCBCTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             cCcEEEECccCCcCCCC--CccCCCCCEEEEEEeCCCCeEEEEE-CCCEEEechHHEEEC
Confidence            34578999999988777  9999999999999998889999997 799999999999875

>2ydl_A SH3 domain-containing kinase-binding protein 1; signaling protein; 2.05A {Homo sapiens} PDB: 2k6d_A

Probab=99.74  E-value=9.4e-18  Score=95.65  Aligned_cols=57  Identities=25%  Similarity=0.526  Sum_probs=51.6

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|+|+++.++  +|+|++||+|.|+.+.  +++||.++. +|+.|+||++||+.+..
T Consensus         3 ~~~~Alydy~a~~~~--eLs~~~Gd~i~vl~~~~~~~gWw~g~~-~g~~G~~P~~yV~~~~~   61 (69)
T 2ydl_A            3 DYCKVIFPYEAQNDD--ELTIKEGDIVTLINKDCIDVGWWEGEL-NGRRGVFPDNFVKLLPP   61 (69)
T ss_dssp             EEEEESSCBCCCSTT--BCCBCTTCEEEEEESCCSSTTEEEEEE-TTEEEEEEGGGEEECCS
T ss_pred             cEEEEcccCCCCCCC--ccccCCCCEEEEEEcCCCCCCEEEEEE-CCcEEEecHHHEEECCC
Confidence            478999999998777  9999999999999986  789999997 89999999999998765

>1k4u_S Phagocyte NADPH oxidase subunit P67PHOX; SH3-peptide complex, helix-turn-helix, hormone/growth factor complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.74  E-value=4e-18  Score=94.97  Aligned_cols=58  Identities=21%  Similarity=0.468  Sum_probs=51.8

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ....++|+|+|.+...+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.++
T Consensus         4 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   61 (62)
T 1k4u_S            4 KGSQVEALFSYEATQPE--DLEFQEGDIILVLSKVNEEWLEGES-KGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             CCEEEECCSCBCCCSSS--BCCBCSSCEEEEEEESSSSCEEEEC-SSCEEEECGGGCCCSC
T ss_pred             CCeEEEECCCCCcCCCC--CccCCCCCEEEEEEeCCCCEEEEEE-CCcEEEEeHHHEEECC
Confidence            34578999999988776  9999999999999998889999995 8999999999998764

>1csk_A C-SRC SH3 domain; phosphotransferase; 2.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.74  E-value=7.3e-18  Score=96.25  Aligned_cols=59  Identities=17%  Similarity=0.417  Sum_probs=50.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEE-cCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIK-KTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~-~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ....++|+|+|+++..+  +|+|++||+|.|+. ..+++||.+++.+|+.|+||++||+...
T Consensus        10 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   69 (71)
T 1csk_A           10 SGTECIAKYNFHGTAEQ--DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE   69 (71)
T ss_dssp             -CEEEEESSCBCCSSTT--BCCBCTTCEEEEEEECSSTTEEEEECTTSCEEEEETTSEEC--
T ss_pred             CCCEEEEceeECcCCCC--cCCCCCCCEEEEeECCCCCCCEEEEeCCCCEEEEehHHeEEcc
Confidence            34578999999988777  99999999999999 6778999999768999999999998654

>2dmo_A Neutrophil cytosol factor 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=1e-17  Score=95.00  Aligned_cols=59  Identities=29%  Similarity=0.526  Sum_probs=52.8

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   64 (68)
T 2dmo_A            6 SGEAHRVLFGFVPETKE--ELQVMPGNIVFVLKKGNDNWATVMF-NGQKGLVPCNYLEPVSG   64 (68)
T ss_dssp             CSEEEEECSSCCCCSSS--SCCCCTTCEEEECEECSSSCEEEEE-TTEEEEECSTTEEECCC
T ss_pred             CCCEEEECcCCCcCCcC--CCCCCCCCEEEEEEeCCCCEEEEEe-CCCEEEeehHHeEECCC
Confidence            34579999999988777  9999999999999998889999976 89999999999998765

>2fpe_A C-JUN-amino-terminal kinase interacting protein 1; SRC-homology 3 (SH3) domain, all beta structure, signaling protein; HET: P6G; 1.75A {Rattus norvegicus} PDB: 2fpd_A*

Probab=99.74  E-value=5.9e-18  Score=94.29  Aligned_cols=57  Identities=16%  Similarity=0.320  Sum_probs=51.2

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEecc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYK   64 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~   64 (101)
                      .+++|+|+|.++.++  ||+|++||+|.|+.+.+++||.+++ .+|+.|+||++||+.+.
T Consensus         4 ~~~~al~~y~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~fP~~yv~~~~   61 (62)
T 2fpe_A            4 QTHRAIFRFVPRHED--ELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVT   61 (62)
T ss_dssp             CCEEECSCBCCSSTT--BCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             CEEEECccCCccCcC--cCcCCCCCEEEEEEecCCCEEEEEECCCCCEEEechHHEEECc
Confidence            468999999998777  9999999999999988889999996 67899999999998753

>2g6f_X RHO guanine nucleotide exchange factor 7; SH3 domain, peptide interaction, signaling protein; HET: NCO; 0.92A {Rattus norvegicus} PDB: 2df6_A* 2p4r_A 2esw_A

Probab=99.74  E-value=6.7e-18  Score=93.22  Aligned_cols=57  Identities=16%  Similarity=0.525  Sum_probs=51.1

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ....++|+|+|+++.++  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+
T Consensus         3 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~l   59 (59)
T 2g6f_X            3 LGSVVRAKFNFQQTNED--ELSFSKGDVIHVTRVEEGGWWEGTH-NGRTGWFPSNYVREI   59 (59)
T ss_dssp             CCCEEEESSCBCCSSTT--BCCBCTTCEEEEEEECTTSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CCcEEEECceeCCCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCcEEEEeHHHEEEC
Confidence            34578999999988766  9999999999999998889999997 889999999999864

>2ak5_A RHO guanine nucleotide exchange factor 7; adaptor proteins, CIN85, PIX/COOL, protein-protein interaction, X-RAY, endocytosis; 1.85A {Rattus norvegicus} PDB: 1zsg_A

Probab=99.74  E-value=7.9e-18  Score=94.26  Aligned_cols=59  Identities=17%  Similarity=0.553  Sum_probs=53.1

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|.+...+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+.+
T Consensus         5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   63 (64)
T 2ak5_A            5 SQLVVRAKFNFQQTNED--ELSFSKGDVIHVTRVEEGGWWEGTH-NGRTGWFPSNYVREIKP   63 (64)
T ss_dssp             CCCEEEESSCBCCCSTT--BCCBCTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEECCC
T ss_pred             CCEEEEEccccCCcCcC--cccCCCCCEEEEeEecCCCEEEEEE-CCCEEEEehHHeEEcCC
Confidence            45679999999988766  9999999999999998889999997 88999999999998754

>1u5s_A Cytoplasmic protein NCK2; protein-protein complex, beta barrel, beta sheet, zinc finger, metal binding protein; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2fry_A

Probab=99.74  E-value=7.4e-18  Score=96.16  Aligned_cols=58  Identities=28%  Similarity=0.608  Sum_probs=52.0

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEc--CCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK--TNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~--~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|+|+|.+...+  +|+|++||+|.|+.+  .+++||.+++.+|+.|+||++||+.+..
T Consensus         7 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   66 (71)
T 1u5s_A            7 HVVQTLYPFSSVTEE--ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSD   66 (71)
T ss_dssp             SEEEESSCCCCCSSS--BCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECCC
T ss_pred             EEEEEcccCCCCCCC--cccCCCCCEEEEEECCCCCCCCEEEEeCCCCEEEEeHHHEEECCC
Confidence            368999999988776  999999999999998  5789999987789999999999998765

>1uti_A GRB2-related adaptor protein 2; signaling protein regulator, SH3 domain/complex, adaptor protein (MONA); 1.5A {Mus musculus} SCOP: b.34.2.1 PDB: 1h3h_A 1oeb_A 2w10_A 2d0n_A

Probab=99.74  E-value=7.4e-18  Score=92.67  Aligned_cols=55  Identities=27%  Similarity=0.477  Sum_probs=50.3

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      +++|+|+|.++.++  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+.
T Consensus         3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   57 (58)
T 1uti_A            3 WARALYDFEALEED--ELGFRSGEVVEVLDSSNPSWWTGRL-HNKLGLFPANYVAPMM   57 (58)
T ss_dssp             EEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             EEEECccCCCCCcC--CCCCCCCCEEEEEEECCCCEEEEEE-CCeEEEeeHHHeEEcc
Confidence            58999999988776  9999999999999998889999998 8999999999998753

>3thk_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.70A {Rattus norvegicus} SCOP: b.34.2.1

Probab=99.74  E-value=7.1e-18  Score=96.64  Aligned_cols=61  Identities=31%  Similarity=0.592  Sum_probs=52.8

Q ss_pred             CCCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           2 ELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         2 ~~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+..+++|+|+|.++..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+..
T Consensus         2 ~~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   62 (73)
T 3thk_A            2 GTGKELVLALYDYQEKSPR--EVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKLDP   62 (73)
T ss_dssp             ---CCEEEECSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECCC
T ss_pred             CCCCEEEEECcCCCcCCCC--ccCCCCCCEEEEEECCCCCeEEEEE-CCcEEEEehHHeEECCC
Confidence            3456689999999988777  9999999999999998889999996 78999999999998765

>2drm_A Acanthamoeba myosin IB; SH3 domain, contractIle protein; 1.35A {Acanthamoeba} PDB: 2drk_A

Probab=99.74  E-value=1e-17  Score=92.02  Aligned_cols=56  Identities=34%  Similarity=0.680  Sum_probs=50.9

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ...++|+|+|+++.++  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+
T Consensus         3 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~l   58 (58)
T 2drm_A            3 GIQVKALYDYDAQTGD--ELTFKEGDTIIVHQKDPAGWWEGEL-NGKRGWVPANYVQDI   58 (58)
T ss_dssp             CEEEEESSCBCCCSTT--BCCBCTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CcEEEECccCCCCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCcEEEEeHHHEEEC
Confidence            4578999999988777  9999999999999998889999998 899999999999853

>2jt4_A Cytoskeleton assembly control protein SLA1; endocytosis, SH3, actin-binding, cytoplasm, cytoskeleton, phosphorylation, SH3 domain, DNA damage, DNA repair, nucleus; NMR {Saccharomyces cerevisiae}

Probab=99.74  E-value=2.1e-17  Score=94.21  Aligned_cols=61  Identities=31%  Similarity=0.604  Sum_probs=53.9

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ....+++|+|+|.++..+  +|+|++||+|.|+.+. +++||.++. .+|+.|+||++||+.+..
T Consensus         4 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   66 (71)
T 2jt4_A            4 KSKKRGIVQYDFMAESQD--ELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPVRD   66 (71)
T ss_dssp             CCCEEEEECSCBCCSSTT--BCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEETTT
T ss_pred             CCCCEEEEcccCCCCCCC--cccCCCCCEEEEEECCCCCCCEEEEECCCCCeEEechHHeEECCC
Confidence            445679999999988777  9999999999999987 789999998 478999999999998765

>1i07_A Epidermal growth factor receptor kinase substrate EPS8; hormone/growth factor; 1.80A {Mus musculus} SCOP: b.34.2.1 PDB: 1aoj_A 1i0c_A

Probab=99.73  E-value=5.5e-18  Score=93.84  Aligned_cols=56  Identities=21%  Similarity=0.532  Sum_probs=51.1

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +++|+|+|.+..++  +|+|++||+|.|+.+ +++||.+++.+|+.|+||++||+.+..
T Consensus         3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~~~~~~g~~G~~P~~yv~~~~~   58 (60)
T 1i07_A            3 YAKSKYDFVARNSS--ELSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMRT   58 (60)
T ss_dssp             EEEESSCBCCSSTT--BCCBCTTCEEEECGG-GCCEEEEECTTSCEEEEEGGGEEEECC
T ss_pred             EEEECccCCCCCCC--cccCCCCCEEEEEEc-CCCeEEEEECCCCEEEEEHHHeEEccC
Confidence            68999999988777  999999999999999 789999998789999999999998754

>2bz8_A SH3-domain kinase binding protein 1; SH3 domain, CIN85 adaptor protein, CBL ubiquitin ligase; 2.0A {Homo sapiens}

Probab=99.73  E-value=8.8e-18  Score=92.44  Aligned_cols=55  Identities=25%  Similarity=0.475  Sum_probs=50.3

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      .++|+|+|+++.++  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+.
T Consensus         3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   57 (58)
T 2bz8_A            3 EAIVEFDYQAQHDD--ELTISVGEIITNIRKEDGGWWEGQI-NGRRGLFPDNFVREIK   57 (58)
T ss_dssp             CEEESSCBCCCSTT--BCCBCTTCEEEEEECCTTTEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             EEEECcccCCCCcC--EeeECCCCEEEEEEeCCCCEEEEEE-CCeEEEEehHHeEEcC
Confidence            47999999988777  9999999999999998889999998 8999999999998764

>1jo8_A ABP1P, actin binding protein; SH3 domain actin-binding-protein, structural protein; 1.30A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 2k3b_A 2rpn_A

Probab=99.73  E-value=7.1e-18  Score=92.82  Aligned_cols=55  Identities=24%  Similarity=0.450  Sum_probs=49.6

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEec
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~   63 (101)
                      .++|+|+|.++.++  +|+|++||+|.|+++.+++||.++.. +|+.|+||++||+.+
T Consensus         2 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~   57 (58)
T 1jo8_A            2 WATAEYDYDAAEDN--ELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEECceECCCCCC--CcccCCCCEEEEEEecCCCcEEEEECCCCCEEEechHHeEEC
Confidence            47899999988777  99999999999999988899999984 389999999999865

>1x2k_A OSTF1, osteoclast stimulating factor 1; SH3 domain, human osteoclast stimulating factor 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.73  E-value=2.3e-17  Score=93.47  Aligned_cols=59  Identities=22%  Similarity=0.586  Sum_probs=53.0

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   64 (68)
T 1x2k_A            6 SGKVFRALYTFEPRTPD--ELYFEEGDIIYITDMSDTNWWKGTS-KGRTGLIPSNYVAEQSG   64 (68)
T ss_dssp             CSEEEEESSCCCCCSTT--BCCCCSSCEEEEEECSCSSEEEEES-SSCEEEEETTTEEECCC
T ss_pred             CcEEEEECceECCCCCC--cccCCCCCEEEEEEcCCCCEEEEEE-CCcEEEEehHHeEEcCC
Confidence            44578999999988777  9999999999999998889999997 88999999999998754

>1wxt_A Hypothetical protein FLJ21522; SH3 domain, EPS8-related protein 3, protein-protein interaction, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=1.6e-17  Score=94.15  Aligned_cols=59  Identities=27%  Similarity=0.643  Sum_probs=52.8

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+.++ ++||.+++.+|+.|+||++||+.+..
T Consensus         6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~   64 (68)
T 1wxt_A            6 SGLKMQVLYEFEARNPR--ELTVVQGEKLEVLDHS-KRWWLVKNEAGRSGYIPSNILEPLSG   64 (68)
T ss_dssp             CCEEEEESSCBCCCSSS--BCCBCTTCEEEEEECS-SSEEEEECTTSCEEEEEGGGEECCCC
T ss_pred             CCeEEEECceECCCCcC--cCCCCCCCEEEEEEcC-CCEEEEEECCCCEEEEEhHHcEECCC
Confidence            45679999999988777  9999999999999995 78999997789999999999998764

>2fpf_A C-JUN-amino-terminal kinase interacting protein 1; scaffold protein 1, islet-brain-1, IB-1, mitogen-activated P kinase 8-interacting protein 1; 3.00A {Rattus norvegicus}

Probab=99.73  E-value=7.2e-18  Score=96.32  Aligned_cols=60  Identities=17%  Similarity=0.343  Sum_probs=52.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|.++..+  +|+|++||+|.|+.+.+++||.+++ .+|+.|+||++||+.+..
T Consensus         5 ~~~~~~al~~y~~~~~~--eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~fP~~yv~~~~~   65 (71)
T 2fpf_A            5 HEQTHRAIFRFVPRHED--ELELEVDDPLLVELQAEDYWYEAYNMRTGARGVFPAYYAIEVTK   65 (71)
T ss_dssp             CCCCEEECSCBCCSSTT--BCCBCTTCEEEEEEECTTSEEEEEETTTTEEEEEEGGGEEECC-
T ss_pred             cCeEEEECeeECccCCC--cccCcCCcEEEEeEecCCCEEEEEECCCCCEEEeehHHEEECCC
Confidence            34468999999998777  9999999999999998889999996 578999999999998764

>2jw4_A Cytoplasmic protein NCK1; SH3 domain, phosphorylation, SH2 domain, signaling protein; NMR {Homo sapiens}

Probab=99.73  E-value=1.4e-17  Score=95.51  Aligned_cols=60  Identities=28%  Similarity=0.607  Sum_probs=52.8

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+.+++|+|+|.+..++  +|+|++||+|.|+++ +++||.+++.+|+.|+||++||+.+..
T Consensus         5 ~~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~~~~   64 (72)
T 2jw4_A            5 AEEVVVVAKFDYVAQQEQ--ELDIKKNERLWLLDD-SKSWWRVRNSMNKTGFVPSNYVERKNS   64 (72)
T ss_dssp             SCCEEEECSSCCCCSSTT--SCCCCTTCEEEEEEC-SSSSEEEECTTSCEEEECTTSCEECCC
T ss_pred             CCCeEEEECcCCCcCCCC--cccCCCCCEEEEEEC-CCCEEEEEECCCCEEEEEhhHEEEcCC
Confidence            345689999999988777  999999999999998 468999997789999999999998764

>2vwf_A Growth factor receptor-bound protein 2; polymorphism, phosphoprotein, golgi apparatus, alternative splicing, HOST-virus interaction, SH3C, signaling; 1.58A {Homo sapiens} PDB: 2w0z_A 1gcq_A 1gfc_A 1gfd_A 1io6_A 2vvk_A

Probab=99.73  E-value=9.6e-18  Score=92.16  Aligned_cols=55  Identities=20%  Similarity=0.543  Sum_probs=50.5

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .+++|+|+|++..++  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+
T Consensus         3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   57 (58)
T 2vwf_A            3 TYVQALFDFDPQEDG--ELGFRRGDFIHVMDNSDPNWWKGAC-HGQTGMFPRNYVTAV   57 (58)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             eEEEECceECCCCcC--CcCCCCCCEEEEEEcCCCCEEEEEE-CCcEEEEchHHeEEC
Confidence            468999999988777  9999999999999998889999998 899999999999865

>2xmf_A Myosin 1E SH3; motor protein, SH3 domain; HET: DIA; 1.50A {Mus musculus}

Probab=99.73  E-value=9.7e-18  Score=92.85  Aligned_cols=56  Identities=25%  Similarity=0.458  Sum_probs=50.7

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ...++|+|+|+++.++  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+
T Consensus         5 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~l   60 (60)
T 2xmf_A            5 SPQCKALYAYDAQDTD--ELSFNANDIIDIIKEDPSGWWTGRL-RGKQGLFPNNYVTKI   60 (60)
T ss_dssp             SCEEEESSCBCCSSTT--BCCBCTTCEEEEEEECTTSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CcEEEECccCCcCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCEEEEEcHHHEEEC
Confidence            4578999999988777  9999999999999998889999998 889999999999863

>2lcs_A NAP1-binding protein 2; adaptor, transferase, signaling protein; NMR {Saccharomyces cerevisiae}

Probab=99.73  E-value=2.1e-17  Score=95.12  Aligned_cols=60  Identities=23%  Similarity=0.447  Sum_probs=52.9

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~~~   65 (101)
                      -...++|+|+|++...+  +|+|++||+|.|+++.+++||.+++. +|+.|+||++||+.+..
T Consensus         4 ~~~~~~Alydy~a~~~~--eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~G~~P~~yv~~~~~   64 (73)
T 2lcs_A            4 VNQRAVALYDFEPENDN--ELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYIQP   64 (73)
T ss_dssp             CCEEEEESSCBCCSSTT--BCCBCTTCEEEEEEEETTTEEEEECTTSSCEEEEESTTEEECCS
T ss_pred             cCCEEEECccCCCCCCC--ccCCcCCCEEEEEEEcCCCEEEEEECCCCCEEEeeHHHEEECCC
Confidence            34578999999988777  99999999999999988899999985 47999999999998754

>1sem_A SEM-5; SRC-homology 3 (SH3) domain, peptide-binding protein; 2.00A {Caenorhabditis elegans} SCOP: b.34.2.1 PDB: 2sem_A 3sem_A 1k76_A 1kfz_A

Probab=99.73  E-value=1.2e-17  Score=91.77  Aligned_cols=55  Identities=24%  Similarity=0.539  Sum_probs=50.4

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .+++|+|+|.++.++  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+
T Consensus         3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   57 (58)
T 1sem_A            3 KFVQALFDFNPQESG--ELAFKRGDVITLINKDDPNWWEGQL-NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CEEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             eEEEECcCCCCCCCC--CcCCCCCCEEEEEEecCCCEEEEEE-CCcEEEechHHeEEC
Confidence            468999999988776  9999999999999998889999998 789999999999864

>1zx6_A YPR154WP; SH3 domain, protein binding; 1.60A {Saccharomyces cerevisiae} PDB: 1ynz_A

Probab=99.73  E-value=1.1e-17  Score=92.12  Aligned_cols=55  Identities=25%  Similarity=0.510  Sum_probs=50.1

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .+++|+|+|+++.++  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+
T Consensus         3 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   57 (58)
T 1zx6_A            3 EYVEALYQFDPQQDG--DLGLKPGDKVQLLEKLSPEWYKGSC-NGRTGIFPANYVKPA   57 (58)
T ss_dssp             CEEEECSCBCCCSTT--BCCBCTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             eEEEECceECCCCCC--CccCCCCCEEEEEEecCCCEEEEEE-CCcEEEeeHHHEEEc
Confidence            468999999988777  9999999999999998889999997 899999999999864

>2fei_A CD2-associated protein; CMS SH3 domain, structural protein; NMR {Homo sapiens}

Probab=99.73  E-value=3.4e-18  Score=96.46  Aligned_cols=56  Identities=18%  Similarity=0.417  Sum_probs=50.9

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +++|+|+|+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus         3 ~~~Alydy~~~~~~--eLs~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~~   58 (65)
T 2fei_A            3 QCKVLFEYIPQNED--ELELKVGDIIDINEEVEEGWWSGTL-NNKLGLFPSNFVKELEL   58 (65)
T ss_dssp             EEECSSCCCCCSTT--BCCCCTTCEEECCCCSSSSEEEEES-SSCEEEEETTTSCBCCC
T ss_pred             EEEECccCCcCCcC--ccCCCCCCEEEEEEecCCCEEEEEE-CCcEEEecHHHEEEcCC
Confidence            58999999998777  9999999999999998889999986 89999999999987654

>2bzy_A CRK-like protein, CRKL SH3C; SH3 domain, dimer, nuclear export; 2.5A {Homo sapiens} PDB: 2bzx_A

Probab=99.73  E-value=1.2e-17  Score=94.50  Aligned_cols=57  Identities=14%  Similarity=0.203  Sum_probs=51.3

Q ss_pred             EEEEEEeccCCC--CCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYS--TKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~--~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|+|.++  ..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+..
T Consensus         2 ~~~~al~dy~~~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~fP~~yv~~~~~   60 (67)
T 2bzy_A            2 VFAKAIQKRVPCAYDKT--ALALEVGDIVKVTRMNINGQWEGEV-NGRKGLFPFTHVKIFDP   60 (67)
T ss_dssp             EEEEECSCBCSEEECTT--BCCBCTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEECCS
T ss_pred             cEEEEeeeECCCCCCCC--ccccCCCCEEEEEEecCCCeEEEEe-CCcEEEEehHHeEECCC
Confidence            478999999987  666  9999999999999998889999976 89999999999998764

>2k2m_A EPS8-like protein 1; alternative splicing, coiled coil, cytoplasm, SH3 domain, signaling protein; NMR {Homo sapiens} PDB: 2rol_A

Probab=99.73  E-value=1.5e-17  Score=94.38  Aligned_cols=59  Identities=20%  Similarity=0.453  Sum_probs=52.3

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|++++ ++||.++..+|+.|+||++||+.+..
T Consensus         7 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~   65 (68)
T 2k2m_A            7 ALKWVLCNYDFQARNSS--ELSVKQRDVLEVLDDS-RKWWKVRDPAGQEGYVPYNILTPYPA   65 (68)
T ss_dssp             CCCEEEESSCBCCCSSS--BCCBCTTCEEEEEECS-SSEEEEECTTSCCEEEEGGGEEECCS
T ss_pred             CCEEEEECccCCCCCCC--cccCCCCCEEEEEEcC-CCeEEEEeCCCCEEEEEhhhEEEcCC
Confidence            34578999999988777  9999999999999986 78999998789999999999998754

>2dl3_A Sorbin and SH3 domain-containing protein 1; ponsin, C-CBL-associated protein, CAP, SH3 domain protein 5 SH3P12, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2dlm_A

Probab=99.73  E-value=3.1e-17  Score=92.82  Aligned_cols=60  Identities=18%  Similarity=0.462  Sum_probs=53.5

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .....++|+|+|++...+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus         5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~~   64 (68)
T 2dl3_A            5 SSGRPARAKFDFKAQTLK--ELPLQKGDIVYIYKQIDQNWYEGEH-HGRVGIFPRTYIELLSG   64 (68)
T ss_dssp             CCSEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSTTEEEEEC-SSCEEEEETTTEEECCS
T ss_pred             CCCcEEEECccCCCCCcC--CccCCCCCEEEEeEecCCCEEEEEE-CCCEEEEchHHEEECCC
Confidence            345679999999988777  9999999999999998889999995 89999999999998765

>2djq_A SH3 domain containing ring finger 2; MUS musculus 0 DAY neonate head cDNA, riken FULL-length enriched library, clone:4831401O22, structural genomics; NMR {Mus musculus}

Probab=99.73  E-value=1.9e-17  Score=93.78  Aligned_cols=60  Identities=22%  Similarity=0.356  Sum_probs=53.1

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      ...+++|+|+|++...+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+...
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~~   65 (68)
T 2djq_A            6 SGPRAKALCNYRGKNPG--DLKFNKGDVILLRRQLDENWYQGEI-NGVSGIFPASSVEVISGP   65 (68)
T ss_dssp             SCCEEEECSCCCSCCTT--CCCCCTTCEEEEEECCCSSEEEEEE-TTEEEEEESSSEETTCSC
T ss_pred             CceEEEECCCCCCCCcC--CccCCCCCEEEEEEecCCCEEEEEE-CCcEEEeehHHEEEcCCC
Confidence            34578999999988777  9999999999999998889999996 899999999999987653

>2dl8_A SLIT-ROBO RHO GTPase-activating protein 2; SH3 domain, formin-binding protein 2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.73  E-value=1.6e-17  Score=95.11  Aligned_cols=59  Identities=20%  Similarity=0.474  Sum_probs=52.9

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|.++..+  +|+|++||+|.|+.+.+.+||.++. +|+.|+||++||+.+..
T Consensus         8 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   66 (72)
T 2dl8_A            8 EPIEAIAKFDYVGRTAR--ELSFKKGASLLLYQRASDDWWEGRH-NGIDGLIPHQYIVVQDT   66 (72)
T ss_dssp             SCEEEEESSCBCCSSSS--BCCBCTTCEEEEEEEEETTEEEEEE-TTEEEEECSSSEEECCS
T ss_pred             CCEEEEECccCCcCCCC--EeccCCCCEEEEEeecCCCEEEEEE-CCEEEEEchHHeEEcCC
Confidence            45679999999988766  9999999999999998889999998 89999999999998654

>2dl5_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.73  E-value=1.6e-17  Score=96.57  Aligned_cols=60  Identities=30%  Similarity=0.494  Sum_probs=53.1

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC-CCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~-~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|++...+  +|+|++||+|.|+++.+ ++||++++.+|+.|+||++||+.+..
T Consensus        12 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   72 (78)
T 2dl5_A           12 YPLTCKVVYSYKASQPD--ELTIEEHEVLEVIEDGDMEDWVKARNKVGQVGYVPEKYLQFPTS   72 (78)
T ss_dssp             SSEEEEECSCBCCCSTT--BCCBCSSEEEEEEECCSSSSEEEEECTTCCEEEEETTTSCCSCC
T ss_pred             CCcEEEEceeECCCCCC--CCCCCCCCEEEEEeccCCCCcEEEEeCCCCEEEEEhHHEEECCC
Confidence            45679999999988777  99999999999999974 89999998669999999999987654

>3eg3_A Proto-oncogene tyrosine-protein kinase ABL1; beta, ATP-binding, cell adhesion, cytoskeleton, LIPO magnesium, manganese, metal-binding, myristate; 1.40A {Homo sapiens} PDB: 3egu_A 3eg0_A 3eg2_A 3eg1_A 1abo_A 1abq_A 1ju5_C* 2o88_A 1bbz_A 1awo_A

Probab=99.73  E-value=1.5e-17  Score=92.64  Aligned_cols=61  Identities=28%  Similarity=0.457  Sum_probs=52.3

Q ss_pred             CCCCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           1 MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         1 ~~~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      |..+...++|+|+|.++..+  +|+|++||+|.|+.+. +.+||.++. .|+.|+||++||+++.
T Consensus         1 ~~~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~~~~-~g~~G~~P~~yv~~~~   62 (63)
T 3eg3_A            1 MENDPNLFVALYDFVASGDN--TLSITKGEKLRVLGYNHNGEWCEAQT-KNGQGWVPSAYITPVN   62 (63)
T ss_dssp             CCCCTTEEEESSCBCCCSSS--BCCBCTTCEEEEEEECTTSSEEEEEE-TTEEEEEEGGGEEESC
T ss_pred             CCCCCEEEEEcceECCCCCC--ccCCCCCCEEEEEEeCCCCCeEEEEE-CCCeEEEehHHeEECC
Confidence            44566789999999988777  9999999999999954 567999998 8899999999998753

>2ebp_A SAM and SH3 domain-containing protein 1; proline-glutamate repeat-containing protein, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2kea_A

Probab=99.73  E-value=2.2e-17  Score=95.01  Aligned_cols=57  Identities=23%  Similarity=0.296  Sum_probs=50.7

Q ss_pred             EEEEEEeccCCC--CCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYS--TKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~--~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|||+|.+.  ..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+..
T Consensus        10 ~~~~alydy~~~~~~~~--eLs~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~~   68 (73)
T 2ebp_A           10 GRARVHTDFTPSPYDTD--SLKLKKGDIIDIISKPPMGTWMGLL-NNKVGTFKFIYVDVLSS   68 (73)
T ss_dssp             EEEEECSCBCCCTTCCS--BCCBCSSCEEEEEECCSSSCEEEEC-SSCEEEECSTTEEECCC
T ss_pred             eEEEEeeccCCCCCCCC--ccCCCCCCEEEEEEeCCCCeEEEEE-CCCEEEEeHHHEEECCC
Confidence            368999999975  555  9999999999999998889999986 88999999999998765

>1wyx_A CRK-associated substrate; beta sheets, cell adhesion; 1.14A {Homo sapiens}

Probab=99.73  E-value=9.8e-18  Score=95.23  Aligned_cols=58  Identities=21%  Similarity=0.435  Sum_probs=52.1

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC---CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT---NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~---~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +.+++|+|+|+++..+  +|+|++||+|.|+.+.   +++||.++. +|+.|+||++||+.+..
T Consensus         3 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   63 (69)
T 1wyx_A            3 NVLAKALYDNVAESPD--ELSFRKGDIMTVLEQDTQGLDGWWLCSL-HGRQGIVPGNRLKILVG   63 (69)
T ss_dssp             EEEEEESSCBCCSSTT--BCCBCTTCEEEEEETTGGGCTTEEEEEE-TTEEEEEEGGGEEEEEE
T ss_pred             CEEEEECccCCcCCCC--ccCCcCCCEEEEeECCCCCCCCcEEEEE-CCcEEEechhhEEECCC
Confidence            4678999999988777  9999999999999997   689999996 89999999999998754

>3cqt_A P59-FYN, proto-oncogene tyrosine-protein kinase FYN; beta barrel, ATP-binding, developmental protein, lipoprotein, manganese, metal-binding; 1.60A {Gallus gallus} PDB: 2l2p_A

Probab=99.72  E-value=1.1e-17  Score=97.67  Aligned_cols=62  Identities=26%  Similarity=0.655  Sum_probs=51.9

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEecccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~~   66 (101)
                      ....+++|+|+|+++..+  +|+|++||+|.|+++.+++||.++. .+|+.|+||++||+.+...
T Consensus         3 ~~~~~~~Alydy~~~~~~--eLs~~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~   65 (79)
T 3cqt_A            3 QISTLFEALYDYEARTED--DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSIYLAPVDRL   65 (79)
T ss_dssp             --CCCEEESSCBCCCSTT--BCCBCTTCEEEEEECTTSSEEEEEETTTCCEEEEEGGGEEEC---
T ss_pred             ccCcEEEECccCCCCCcC--cCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEeehHHeEECCcc
Confidence            344568999999988777  9999999999999998889999998 5789999999999987653

>2v1q_A SLA1, cytoskeleton assembly control protein SLA1; structural genomics, phosphorylation, structural protein, yeast, SH3 domain; 1.2A {Saccharomyces cerevisiae} PDB: 1z9z_A

Probab=99.72  E-value=2.2e-17  Score=91.25  Aligned_cols=57  Identities=33%  Similarity=0.617  Sum_probs=50.4

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEc-CCCCceEEEc-CCCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-TNKDWWQVIR-SSGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~-~~~~Ww~~~~-~~g~~G~vP~~yv~~~   63 (101)
                      ..+++|+|+|.++.++  +|+|++||+|.|+++ .+++||.++. .+|+.|+||++||+.+
T Consensus         2 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~l   60 (60)
T 2v1q_A            2 MERGIVQYDFMAESQD--ELTIKSGDKVYILDDKKSKDWWMCQLVDSGKSGLVPAQFIEPV   60 (60)
T ss_dssp             CCEEEECSCBCCCSTT--BCCBCTTCEEEEEESSSCSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CcEEEEeeeECCCCCC--CccCCCCCEEEEEeCCCCCCCEEEEECCCCCEEEEEHHHEEEC
Confidence            4578999999988777  999999999999998 4789999998 4789999999999853

>1yn8_A NBP2, NAP1-binding protein 2; SH3 domain, unknown function; 1.70A {Saccharomyces cerevisiae}

Probab=99.72  E-value=1.4e-17  Score=91.70  Aligned_cols=56  Identities=27%  Similarity=0.480  Sum_probs=50.4

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC-CcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~-g~~G~vP~~yv~~~   63 (101)
                      ..++|+|+|.++.++  +|+|++||+|.|+.+.+++||.++... |+.|+||++||+.+
T Consensus         2 ~~~~al~d~~~~~~~--eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~   58 (59)
T 1yn8_A            2 QRAVALYDFEPENDN--ELRLAEGDIVFISYKHGQGWLVAENESGSKTGLVPEEFVSYI   58 (59)
T ss_dssp             EEEEECSCBCCCSTT--BCCBCTTCEEEEEEEEETTEEEEECTTSSCEEEEEGGGEEEC
T ss_pred             CEEEECccCCCCCCC--CcCCCCCCEEEEEEcCCCCeEEEEECCCCCEEEEehHHeEEC
Confidence            468999999988776  999999999999999888999999864 79999999999875

>2iim_A Proto-oncogene tyrosine-protein kinase LCK; beta-barrels, signaling protein; HET: PG4; 1.00A {Homo sapiens} SCOP: b.34.2.1 PDB: 1h92_A 1kik_A

Probab=99.72  E-value=1.9e-17  Score=92.23  Aligned_cols=56  Identities=21%  Similarity=0.557  Sum_probs=49.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEe
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV   62 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~   62 (101)
                      ...+++|+|+|.+...+  +|+|++||+|.|++++ ++||.+++ .+|+.|+||++||+.
T Consensus         5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~   61 (62)
T 2iim_A            5 QDNLVIALHSYEPSHDG--DLGFEKGEQLRILEQS-GEWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             TTCEEEESSCBCCCSTT--BCCBCTTCEEEEEECC-SSEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CCcEEEEcccCCCCCCC--CcCCCCCCEEEEEEcC-CCEEEEEECCCCCEEEEEHHHEEE
Confidence            34578999999988777  9999999999999996 48999997 588999999999985

>2cre_A HEF-like protein; SH3 domain, SRC homology 3 domain, beta barrel, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.72  E-value=1.9e-17  Score=94.36  Aligned_cols=61  Identities=18%  Similarity=0.429  Sum_probs=53.6

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC---CCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT---NKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~---~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      ....+++|+|+|.+...+  +|+|++||+|.|+.+.   +++||.++ .+|+.|+||++||+.+...
T Consensus         5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~~Ww~g~-~~g~~G~~P~~yv~~~~~~   68 (71)
T 2cre_A            5 SSGLLARALYDNCPDCSD--ELAFSRGDILTILEQHVPESEGWWKCL-LHGRQGLAPANRLQILSGP   68 (71)
T ss_dssp             CCCEEEEESSCCCCSSSS--BCCCCSSCCEEEEESCCTTSTTEEEEE-SSSCCEEEETTTEEECCCS
T ss_pred             CCcEEEEECcccCcCCCC--CCCCCCCCEEEEeEcCCCCCCCcEEEE-ECCCEEEEehHHEEECCCC
Confidence            345679999999988776  9999999999999986   78999999 4899999999999987653

>2dl7_A KIAA0769 protein; SH3 domain, FCHSD2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=3.6e-17  Score=93.85  Aligned_cols=59  Identities=24%  Similarity=0.406  Sum_probs=52.0

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC---CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT---NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~---~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|.+...+  +|+|++||+|.|+++.   +++||.++. +|+.|+||++||+.+..
T Consensus         7 ~~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   68 (73)
T 2dl7_A            7 GVCFVKALYDYEGQTDD--ELSFPEGAIIRILNKENQDDDGFWEGEF-NGRIGVFPSVLVEELSS   68 (73)
T ss_dssp             CCEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCCSSSSSCEEEEE-TTEEEEECSSSEEECCS
T ss_pred             CCEEEEECccCCcCCCC--cCCCCCCCEEEEEECCCCCCCCcEEEEE-CCCEEEEChHHEEECCC
Confidence            34578999999988777  9999999999999983   678999995 89999999999998765

>3ulr_B SRC substrate cortactin; SH3, protein-protein interaction, hydrolase, protein binding; 1.65A {Mus musculus} SCOP: b.34.2.0 PDB: 2d1x_A

Probab=99.72  E-value=1.4e-17  Score=93.36  Aligned_cols=58  Identities=24%  Similarity=0.476  Sum_probs=51.7

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .....++|+|+|.++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+
T Consensus         7 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~   64 (65)
T 3ulr_B            7 DLGITAIALYDYQAAGDD--EISFDPDDIITNIEMIDDGWWRGVC-KGRYGLFPANYVELR   64 (65)
T ss_dssp             SCCSCEEECSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CCceEEEEEeeECCCCcC--EeeEecCCEEEEEEecCCCEEEEEE-CCcEEEEehHHeEEC
Confidence            344578999999988777  9999999999999998889999995 899999999999875

>3c0c_A Endophilin-A2; endocytosis, SH3, voltage-gated calcium channel, endosome, L binding, membrane, phosphoprotein, proto-oncogene, SH3 DOMA; 1.70A {Rattus norvegicus}

Probab=99.72  E-value=1.8e-17  Score=95.20  Aligned_cols=60  Identities=27%  Similarity=0.569  Sum_probs=53.6

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+.+.
T Consensus        12 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~~~   71 (73)
T 3c0c_A           12 DQPSCKALYDFEPENDG--ELGFREGDLITLTNQIDENWYEGML-HGQSGFFPLSYVQVLVPL   71 (73)
T ss_dssp             CSCEEEESSCBCCSSTT--BCCBCTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEEEECC
T ss_pred             CCeEEEECccCCCCCCC--CccCcCCCEEEEEEecCCCEEEEEE-CCCEEEeChHHEEECCCC
Confidence            34578999999988777  9999999999999998889999997 899999999999987653

>2eqi_A Phospholipase C, gamma 2; SH3 domain, PLCG2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.72  E-value=9.3e-18  Score=95.31  Aligned_cols=61  Identities=25%  Similarity=0.436  Sum_probs=52.8

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .....++|+|+|++..++  +|+|++||+|.|+.+.+++||.++...+..|+||++||+.+..
T Consensus         5 ~~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~~P~~yv~~~~~   65 (69)
T 2eqi_A            5 SSGRTVKALYDYKAKRSD--ELTFCRGALIHNVSKEPGGWWKGDYGTRIQQYFPSNYVEDISG   65 (69)
T ss_dssp             CCCCEEEESSCBCCCSSS--CCCBCTTCEEESCCCCSSSCEEEEETTEEEEEECGGGEEECCS
T ss_pred             CCCcEEEECeeECCCCcC--ccCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEchHHcEECcc
Confidence            345679999999988777  9999999999999998889999998544559999999998765

>2epd_A RHO GTPase-activating protein 4; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=1.4e-17  Score=96.35  Aligned_cols=61  Identities=18%  Similarity=0.353  Sum_probs=53.9

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      ++...++|+|+|+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+...
T Consensus         8 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~~   68 (76)
T 2epd_A            8 EGVVEAVACFAYTGRTAQ--ELSFRRGDVLRLHERASSDWWRGEH-NGMRGLIPHKYITLPAGT   68 (76)
T ss_dssp             SCCEEEEESSCEECSSTT--BCEECTTCEEEEEEEEETTEEEEEE-TTEEEEEESSSEECCSSC
T ss_pred             CCCEEEEECcCCCCCCCC--ccCCCCCCEEEEEEeCCCCEEEEEE-CCcEEEEehHHEEEcCCC
Confidence            344679999999988777  9999999999999998889999998 899999999999987653

>2o9s_A Ponsin; SH3 domain, signaling protein; 0.83A {Homo sapiens} PDB: 2o31_A 2o9v_A 2o2w_A

Probab=99.72  E-value=3.1e-17  Score=92.66  Aligned_cols=60  Identities=18%  Similarity=0.423  Sum_probs=52.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC-CcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~-g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|+++..+  +|+|++||+|.|+++.+++||.++... |+.|+||++||+.+..
T Consensus         5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   65 (67)
T 2o9s_A            5 FTGEAIAKFNFNGDTQV--EMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVIKR   65 (67)
T ss_dssp             TSEEEEECSCBCCSSTT--BCCBCTTCEEEEEEECSSSEEEEECTTSSCEEEEEGGGEEEEEC
T ss_pred             CCEEEEECccCCcCCcC--ccCCCCCCEEEEEEecCCCEEEEEECCCCCEEEEChHHeEECCC
Confidence            34578999999988777  999999999999999888999999854 5999999999998653

>1x2p_A Protein arginine N-methyltransferase 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=2.3e-17  Score=93.39  Aligned_cols=59  Identities=24%  Similarity=0.468  Sum_probs=52.3

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|.+...+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   64 (68)
T 1x2p_A            6 SGEEFVAIADYAATDET--QLSFLRGEKILILRQTTADWWWGER-AGCCGYIPANHVGKHSG   64 (68)
T ss_dssp             SCCEEEESSCCCCSSTT--BCCCCTTCEEEEEECCSSSEEEEEC-TTCCEEEESSSEECCCC
T ss_pred             CCCEEEECceECCCCcC--CcCCCCCCEEEEEEcCCCCEEEEEE-CCeEEEEehHHeEECCC
Confidence            34578999999988777  9999999999999998889999996 78999999999997654

>2ekh_A SH3 and PX domain-containing protein 2A; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=3.1e-17  Score=95.81  Aligned_cols=59  Identities=12%  Similarity=0.300  Sum_probs=53.0

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|.+...+  +|+|++||+|.|+++.+++||.++. .|+.|+||++||+.+..
T Consensus         7 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~   65 (80)
T 2ekh_A            7 GATSYMTCSAYQKVQDS--EISFPAGVEVQVLEKQESGWWYVRF-GELEGWAPSHYLVLDEN   65 (80)
T ss_dssp             SCEEEEECSCBCCSSTT--SCCBCTTCEEEEEEECTTSEEEEEE-TTEEEEEETTTEECCCC
T ss_pred             CCCEEEECCCCCCCCCC--ccCcCCCCEEEEEEeCCCCeEEEEE-CCCEEEEEhHHeEECCC
Confidence            45678999999988777  9999999999999998889999997 78999999999998765

>3h0h_A Proto-oncogene tyrosine-protein kinase FYN; beta barrel, transferase; HET: PG4; 1.76A {Homo sapiens} SCOP: b.34.2.1 PDB: 3h0i_A 3h0f_A*

Probab=99.72  E-value=2.3e-17  Score=94.48  Aligned_cols=58  Identities=28%  Similarity=0.632  Sum_probs=51.8

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEec
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~   63 (101)
                      +..+++|+|+|.++..+  +|+|++||+|.|+++.+.+||.++.. +|+.|+||++||+++
T Consensus        14 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~   72 (73)
T 3h0h_A           14 GVTLFVALYDYEAITED--DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV   72 (73)
T ss_dssp             TTCEEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCEEEEECccCCCCCCC--cceEeCCCEEEEEEecCCCeEEEEECCCCCEEEEEHHHeEEC
Confidence            34578999999988777  99999999999999988899999984 789999999999875

>1oot_A Hypothetical 40.4 kDa protein in PES4-His2 intergenic region; SH3 domain, sturctural genomics, structural genomics; 1.39A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1ssh_A 2a08_A

Probab=99.72  E-value=1.9e-17  Score=91.63  Aligned_cols=55  Identities=27%  Similarity=0.555  Sum_probs=49.5

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ..++|+|+|.++..+  +|+|++||+|.|+++.  +++||.++. +|+.|+||++||+.+
T Consensus         4 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~l   60 (60)
T 1oot_A            4 PKAVALYSFAGEESG--DLPFRKGDVITILKKSDSQNDWWTGRV-NGREGIFPANYVELV   60 (60)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSCTTSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             cEEEECccCCcCCcC--EeeEcCCCEEEEEEeCCCCCCeEEEEE-CCEEEEEeHHHEEEC
Confidence            468999999988776  9999999999999986  678999998 889999999999863

>2jte_A CD2-associated protein; SH3 domain, coiled coil, cytoplasm, phosphorylation, SH3-binding, signaling protein; NMR {Mus musculus} PDB: 2kro_A

Probab=99.72  E-value=2.8e-17  Score=91.98  Aligned_cols=57  Identities=23%  Similarity=0.455  Sum_probs=50.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEec
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+.+.  +++||.++. +|+.|+||++||+.+
T Consensus         5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~W~~g~~-~g~~G~~P~~yv~~l   63 (64)
T 2jte_A            5 AKEYCRTLFPYTGTNED--ELTFREGEIIHLISKETGEAGWWKGEL-NGKEGVFPDNFAVQI   63 (64)
T ss_dssp             SSEEEEESSCBCCSSSS--BCCBCTTCEEEEEESCSSSTTEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CCEEEEECccCCccCCC--ccCCCCCCEEEEEECCCCCCCEEEEEE-CCeEEEEeHHHEEEC
Confidence            34578999999988777  9999999999999985  678999996 899999999999875

>1s1n_A Nephrocystin 1; beta barrel, cell adhesion; NMR {Homo sapiens}

Probab=99.72  E-value=1.6e-17  Score=94.03  Aligned_cols=59  Identities=25%  Similarity=0.492  Sum_probs=52.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ....++|+|+|.++..+  +|+|++||+|.|+.+.+++||.+++.+|+.|+||++||+.+.
T Consensus         9 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   67 (68)
T 1s1n_A            9 TGEEYIAVGDFTAQQVG--DLTFKKGEILLVIEKKPDGWWIAKDAKGNEGLVPRTYLEPYS   67 (68)
T ss_dssp             CCEEEEECSCBCCSSSS--CCCBCSSEEEEECSCCSSSEEEEECSSSCEEEEESTTEEECC
T ss_pred             CCCEEEEcccCCCCCCC--cCCCCCCCEEEEEEcCCCCeEEEEECCCCEEEEehHHeEECc
Confidence            34578999999988776  999999999999999888999999778999999999998753

>3ngp_A Spectrin alpha chain, brain; beta barrel, structural protein; 1.08A {Gallus gallus} PDB: 1e7o_A 1e6g_A 1e6h_A 1uue_A 1h8k_A 2lj3_A 1aey_A 1m8m_A 1shg_A 1u06_A 2nuz_A 2cdt_A 1hd3_A 2f2v_A 2f2w_A 2jm8_A 2jm9_A 2jma_A 3m0r_A 3m0p_A ...

Probab=99.72  E-value=2e-17  Score=91.83  Aligned_cols=57  Identities=32%  Similarity=0.686  Sum_probs=50.9

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      +..+++|+|+|.++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+
T Consensus         5 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~-~g~~G~~P~~yv~~~   61 (62)
T 3ngp_A            5 GKELVLVLYDYQEKSPR--ELTVKKGDILTLLNSTNKDWWKIEV-NGRQGFVPAAYLKKL   61 (62)
T ss_dssp             -CCEEEECSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CCEEEEECcCCCCCCCC--CccCCCCCEEEEeEecCCCeEEEEE-CCEEEEEEHHHEEEC
Confidence            44578999999988776  9999999999999998889999997 889999999999865

>2gnc_A SLIT-ROBO RHO GTPase-activating protein 1; beta barrel, signaling protein; 1.80A {Mus musculus}

Probab=99.72  E-value=1.1e-17  Score=92.65  Aligned_cols=56  Identities=20%  Similarity=0.403  Sum_probs=49.7

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceE
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE   61 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~   61 (101)
                      ....+++|+|+|+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+
T Consensus         4 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~   59 (60)
T 2gnc_A            4 GSPEFAIAKFDYVGRSAR--ELSFKKGASLLLYHRASEDWWEGRH-NGIDGLVPHQYIV   59 (60)
T ss_dssp             --CEEEEESSCBCCSSTT--BCCBCTTCEEEEEEEEETTEEEEEE-TTEEEEEEGGGEE
T ss_pred             CCCEEEEECCCCCcCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCeEEEEeHhhEE
Confidence            345679999999988777  9999999999999998789999998 7999999999996

>2j6f_A CD2-associated protein; metal-binding, immune response, SH3, SH2 domain, SH3 zinc-finger, SH3- binding, UBL conjugation pathway; 1.7A {Homo sapiens} PDB: 2j6k_A 2j6o_A 2j7i_A 2krm_A

Probab=99.72  E-value=1.7e-17  Score=92.43  Aligned_cols=56  Identities=27%  Similarity=0.439  Sum_probs=50.2

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEc-CCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~-~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .++|+|+|.++..+  +|+|++||+|.|+.+ .+++||.++. +|+.|+||++||+.+..
T Consensus         3 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   59 (62)
T 2j6f_A            3 DYIVEYDYDAVHDD--ELTIRVGEIIRNVKKLQEEGWLEGEL-NGRRGMFPDNFVKEIKR   59 (62)
T ss_dssp             CEEECSCBCCSSTT--BCCBCTTCEEEEEEECSSTTEEEEEE-TTEEEEEEGGGEEECC-
T ss_pred             EEEECccCCcCCcC--CcCCcCCCEEEEEEecCCCCEEEEEE-CCcEEEechHHEEECCC
Confidence            48999999988777  999999999999998 6789999996 89999999999998754

>1y0m_A 1-phosphatidylinositol-4,5-bisphosphate phosphodiesterase gamma 1; SH3 domain, hydrolase; 1.20A {Rattus norvegicus} PDB: 1ywp_A 1ywo_A

Probab=99.72  E-value=1.7e-17  Score=92.10  Aligned_cols=57  Identities=23%  Similarity=0.504  Sum_probs=50.2

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEE-EEcCCceEecc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPF-YVPASYVEVYK   64 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G-~vP~~yv~~~~   64 (101)
                      ..+++|+|+|+++.++  +|+|++||+|.|+.+.+++||.++. .++.| +||++||+.++
T Consensus         3 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~gG~~P~~yv~~~~   60 (61)
T 1y0m_A            3 KSAVKALFDYKAQRED--ELTFTKSAIIQNVEKQDGGWWRGDY-GGKKQLWFPSNYVEEMI   60 (61)
T ss_dssp             CCCEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEEGGGEEECC
T ss_pred             CCEEEECcCCCcCCCC--CcCCcCCCEEEEEEecCCCEEEEEE-CCeEEEEEChHHcEECC
Confidence            4568999999988777  9999999999999998889999998 66665 99999998764

>2ct3_A Vinexin; SH3 domian, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.72  E-value=3.8e-17  Score=92.88  Aligned_cols=61  Identities=15%  Similarity=0.395  Sum_probs=54.0

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~~~   65 (101)
                      .....++|+|+|+++.++  +|+|++||+|.|+++.+++||.+++. +++.|+||++||+.+..
T Consensus         5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2ct3_A            5 SSGTPYRAMYQYRPQNED--ELELREGDRVDVMQQCDDGWFVGVSRRTQKFGTFPGNYVAPVSG   66 (70)
T ss_dssp             CCCEEEEESSCBCCSSTT--BCCBCTTEEEEEEEECSSSCEEEEESSSCCEEEECTTTEEETTC
T ss_pred             CCCcEEEECccCCcCCcC--CccCCCCCEEEEEEECCCCEEEEEECCCCCEEEechHHeEECCC
Confidence            345679999999988777  99999999999999988899999985 58999999999998765

>2da9_A SH3-domain kinase binding protein 1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.72  E-value=3.2e-17  Score=93.34  Aligned_cols=59  Identities=24%  Similarity=0.512  Sum_probs=52.6

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+.+.  +++||.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~~   66 (70)
T 2da9_A            6 SGDYCKVIFPYEAQNDD--ELTIKEGDIVTLINKDCIDVGWWEGEL-NGRRGVFPDNFVKLLSG   66 (70)
T ss_dssp             SSEEEEECSCCCCSSTT--BCCCCTTEEEEEEECCCSSTTEEEEEC-SSCEEEEEGGGEEECCC
T ss_pred             CCcEEEECcCCCCCCcC--EeeEcCCCEEEEEECCCCCCCeEEEEE-CCcEEEechHHeEECCC
Confidence            45679999999988777  9999999999999985  789999996 89999999999998765

>2enm_A Sorting nexin-9; SH3-like barrel, protein transport, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.72  E-value=3.5e-17  Score=94.76  Aligned_cols=58  Identities=24%  Similarity=0.496  Sum_probs=52.2

Q ss_pred             EEEEEEeccCCC-CCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYS-TKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~-~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|+|+++ ..+  +|+|++||+|.|+.+. +++||.+++.+|+.|+||++||+.+..
T Consensus        10 ~~~~al~dy~~~~~~~--eLs~~~Gd~i~v~~~~~~~gW~~g~~~~g~~G~~P~~yv~~~~~   69 (77)
T 2enm_A           10 TKARVMYDFAAEPGNN--ELTVTEGEIITVTNPNVGGGWLEGKNNKGEQGLVPTDYVEILPN   69 (77)
T ss_dssp             EEEEESSCCCCCTTSS--BCCCCTTCEEEEEESCCSSSEEEEECTTCCEEEEETTTEEEECC
T ss_pred             cEEEECccCCCCCCCC--eecCCCCCEEEEeEccCCCCeEEEEECCCCEEEeehHHeEECCC
Confidence            578999999987 666  9999999999999985 789999997789999999999998765

>2eyx_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH3, signaling protein; NMR {Homo sapiens}

Probab=99.72  E-value=1.2e-17  Score=94.59  Aligned_cols=61  Identities=16%  Similarity=0.158  Sum_probs=52.1

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +..+++|+|+|.++..+..+|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+..
T Consensus         5 ~~~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~~   65 (67)
T 2eyx_A            5 GPIYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGEC-NGKRGHFPFTHVRLLDQ   65 (67)
T ss_dssp             CSCBEEECCCBCCCTTCSSBCCBCSSEEEEEEEECTTSEEEEEE-TTEEEEEEGGGBCCBCS
T ss_pred             CCEEEEEeEEECCCCCCCCccccCCCCEEEEEEecCCCEEEEEE-CCCEEEEehHhEEEcCC
Confidence            45579999999987323349999999999999998889999976 89999999999987653

>1z9q_A Neutrophil cytosol factor 4; oxidoreductase activator; NMR {Homo sapiens}

Probab=99.72  E-value=5.1e-18  Score=99.21  Aligned_cols=60  Identities=27%  Similarity=0.519  Sum_probs=53.3

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccccC
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS   67 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~   67 (101)
                      ...++|+|+|+++..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+...+
T Consensus        18 ~~~~~Alydy~a~~~~--eLsf~~Gd~I~Vl~~~~~gWw~g~~-~g~~G~fP~nyV~~~~~~p   77 (79)
T 1z9q_A           18 APRAEALFDFTGNSKL--ELNFKAGDVIFLLSRINKDWLEGTV-RGATGIFPLSFVKILKDFP   77 (79)
T ss_dssp             CCCEEESSCCCCSSTT--BCCCCTTCCBCCCEESSSSEEEEEE-TTEEEEEEGGGEEESSCCC
T ss_pred             ceEEEEcCccCCCCCC--cccccCCCEEEEeEecCCCEEEEEE-CCeEEEecHHHEEECCCCC
Confidence            3468999999988777  9999999999999998899999996 7999999999999876543

>2i0n_A Class VII unconventional myosin; beta-sheet loop, structural protein; NMR {Dictyostelium discoideum}

Probab=99.72  E-value=2.2e-17  Score=96.45  Aligned_cols=58  Identities=17%  Similarity=0.298  Sum_probs=51.7

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCC-ceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~-Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|+++..+  +|+|++||+|.|+++.+.+ ||.++. +|+.|+||++||+.+..
T Consensus        10 ~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~~   68 (80)
T 2i0n_A           10 AKYARALKDYNVSDTS--LLPFKRNDIITITFKDQENKWFMGQL-NGKEGSFPVDHVEILLS   68 (80)
T ss_dssp             CCEEEESSCBCCCSSS--SCCBCSSEEEEEEEESSSSSEEEEEE-TTEEEEEEGGGEEEESS
T ss_pred             CeEEEECCCCCcCCCC--CcCCCCCCEEEEEEecCCCCEEEEEE-CCcEEEechHHEEECCC
Confidence            3478999999988776  9999999999999998777 999985 89999999999998765

>2vkn_A Protein SSU81; membrane, SH3 domain, transmembrane, membrane; 2.05A {Saccharomyces cerevisiae}

Probab=99.72  E-value=2.2e-17  Score=94.09  Aligned_cols=60  Identities=23%  Similarity=0.491  Sum_probs=51.8

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|+|+|.++..+..+|+|++||+|.|++. +++||.+++.+|+.|+||++||+.+..
T Consensus         5 ~~~~~alydy~~~~~~~~eLsf~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~~~~   64 (70)
T 2vkn_A            5 IYKAKALYPYDADDDDAYEISFEQNEILQVSDI-EGRWWKARRANGETGIIPSNYVQLIDG   64 (70)
T ss_dssp             EEEEEESSCBCCCSSSTTBCCBCTTCEEEEECT-TSSEEEEECTTSCEEEEEGGGEEEEEE
T ss_pred             CEEEEECccCCCCCCCCCcccCCCCCEEEEEEc-CCCeEEEEECCCCEEEEehHHEEECCC
Confidence            456899999998765455999999999999987 678999997789999999999997654

>2d8j_A FYN-related kinase; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.71  E-value=3.1e-17  Score=94.86  Aligned_cols=61  Identities=21%  Similarity=0.497  Sum_probs=53.8

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC--CcE------EEEcCCceEecccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS--GKP------FYVPASYVEVYKKL   66 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~--g~~------G~vP~~yv~~~~~~   66 (101)
                      ...+++|+|+|++...+  +|+|++||+|.|+++.+++||.++...  |+.      |+||++||+.+...
T Consensus         6 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~~~~~~~G~~P~~yv~~~~~~   74 (77)
T 2d8j_A            6 SGQYFVALFDYQARTAE--DLSFRAGDKLQVLDTSHEGWWLARHLEKKGTGLGQQLQGYIPSNYVAEDSGP   74 (77)
T ss_dssp             CCEEEEESSCBCCSSSS--BCCBCTTCCEEEEECCSSSEEEEEECSSCCSSCCCCSEEEEETTTEEECCCC
T ss_pred             CCCEEEEccCCCCCCCC--ccCCCCCCEEEEEECCCCCeEEEEECCCCCcCcccCCceEECHHHeeEcCCc
Confidence            45689999999988777  999999999999999888999999854  777      99999999987653

>2x3w_D Syndapin I, protein kinase C and casein kinase substrate in N protein 1; endocytosis, N-WAsp, dynamin, pacsin I, transferase; 2.64A {Mus musculus} PDB: 2x3x_D

Probab=99.71  E-value=1.4e-17  Score=92.08  Aligned_cols=57  Identities=28%  Similarity=0.520  Sum_probs=48.7

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC-CCceEEEcCCCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~-~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ...++|+|+|+++.++  +|+|++||+|.|+++.+ ++||.++..+|+.|+||++||+.+
T Consensus         3 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~g~~~~g~~G~~P~~yv~~l   60 (60)
T 2x3w_D            3 GVRVRALYDYDGQEQD--ELSFKAGDELTKLGEEDEQGWCRGRLDSGQLGLYPANYVEAI   60 (60)
T ss_dssp             -CEEEECSCBCCSSSS--BCCBCTTCEEEECSCCCSSSEEEEECSSCCEEEEEGGGEEC-
T ss_pred             CCEEEECcccCccCCC--cccCCCCCEEEEEEccCCCCceEEEeCCCCEEEecHHHEEEC
Confidence            4578999999988776  99999999999998864 489999985589999999999753

>4e6r_A Cytoplasmic protein NCK2; SH3 domain, protein binding, structural genomics, joint CENT structural genomics, JCSG, protein structure initiative; HET: MLY; 2.20A {Homo sapiens} PDB: 2frw_A 2js0_A

Probab=99.71  E-value=3.3e-17  Score=89.84  Aligned_cols=55  Identities=16%  Similarity=0.424  Sum_probs=49.7

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ..++|+|+|.++..+  +|+|++||+|.|+++.+++||.+.. +|+.|+||++||++.
T Consensus         2 ~~a~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~   56 (58)
T 4e6r_A            2 IPAFVXFAYVAERED--ELSLVXGSRVTVMEXCSDGWWRGSY-NGQIGWFPSNYVLEE   56 (58)
T ss_dssp             EEEEECSCBCCCSTT--BCCBCTTCEEEEEEECTTSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEEECccCCCCCCC--EeeEeCCCEEEEeEcCCCCEEEEEE-CCcEEEEehHHEEEC
Confidence            468999999988777  9999999999999998889999965 889999999999864

>2dbm_A SH3-containing GRB2-like protein 2; EC 2.3.1.-, SH3 domain protein 2A, endophilin 1, EEN-B1, structural genomics, NPPSFA; NMR {Homo sapiens} PDB: 2knb_B 3iql_A

Probab=99.71  E-value=2.4e-17  Score=94.62  Aligned_cols=60  Identities=23%  Similarity=0.551  Sum_probs=53.6

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      ...+++|+|+|++...+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+...
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~~   65 (73)
T 2dbm_A            6 SGPCCRALYDFEPENEG--ELGFKEGDIITLTNQIDENWYEGML-HGHSGFFPINYVEILVAL   65 (73)
T ss_dssp             CCCEEEESSCBCCCSTT--CCCBCTTCEEECCBCSSSSEEEEEE-TTEEEEEESSSEEESSCC
T ss_pred             CCCEEEEccccCCCCCC--CccCCCCCEEEEEEecCCCEEEEEE-CCCEEEechHHEEEccCC
Confidence            44579999999988777  9999999999999998889999997 899999999999987653

>4esr_A Jouberin; AHI-1, AHI1, AHI-1 SH3 domain, SH3 domain, dynamin-2, protei binding, chronic myeloid leukemia; 1.53A {Homo sapiens}

Probab=99.71  E-value=1.6e-17  Score=94.29  Aligned_cols=57  Identities=30%  Similarity=0.515  Sum_probs=51.5

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ..++|+|+|.+...+  +|+|++||+|.|+.+.+++||.++..+|+.|+||++||++..
T Consensus         7 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   63 (69)
T 4esr_A            7 PTVVALYDYTANRSD--ELTIHRGDIIRVFFKDNEDWWYGSIGKGQEGYFPANHVASET   63 (69)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEEECSSSEEEEEEETTEEEEEEGGGEEEHH
T ss_pred             CEEEECccCCCCCcC--cCCCCCCCEEEEEEecCCCeEEEEeCCCCEEEEchHHeEECc
Confidence            468999999988777  999999999999999888999999768899999999998754

>2ysq_A RHO guanine nucleotide exchange factor 9; SH3 domain, CDC42 guanine nucleotide exchange factor (GEF) 9, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.71  E-value=5.2e-17  Score=94.95  Aligned_cols=61  Identities=20%  Similarity=0.416  Sum_probs=53.9

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccccC
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS   67 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~   67 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+.+.+.+||.++. .|+.|+||++||+.+....
T Consensus         9 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~~~   69 (81)
T 2ysq_A            9 SIVSAEAVWDHVTMANR--ELAFKAGDVIKVLDASNKDWWWGQI-DDEEGWFPASFVRLWVNQE   69 (81)
T ss_dssp             CCEEEEESSCCCCSSSS--SCCCCTTCEEEEEECCSSSEEEEEC-SSCEEEEEGGGEEESSCCC
T ss_pred             CceEEEEeeeECCCCCC--cCCCCCCCEEEEEEEcCcCEEEEEE-CCCEEEechHHEEEcCCcc
Confidence            34578999999988776  9999999999999998889999997 6899999999999876533

>2ed1_A 130 kDa phosphatidylinositol 4,5-biphosphate- dependent ARF1 GTPase-activating protein...; GTPase activation, membrane, metal-binding, SH3 domain; NMR {Homo sapiens} PDB: 2rqt_A 2rqu_A

Probab=99.71  E-value=2.5e-17  Score=95.27  Aligned_cols=60  Identities=20%  Similarity=0.441  Sum_probs=52.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC--CcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS--GKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~--g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|||+|+++..+  +|+|++||+|.|+++.+++||.++...  |+.|+||++||+.+..
T Consensus         9 ~~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~~g~~G~~P~~yv~~~~~   70 (76)
T 2ed1_A            9 KVRRVKTIYDCQADNDD--ELTFIEGEVIIVTGEEDQEWWIGHIEGQPERKGVFPVSFVHILSD   70 (76)
T ss_dssp             CCEEEEESSCCCCSSSS--BCCCCSSCEEEESSCCSSSEEEEEETTCTTCEEEEEGGGEEECCC
T ss_pred             CCeEEEECccCCCCCcC--CcCcCCCCEEEEEEecCCCEEEEEECCCCCCEEEEehHHeEECCC
Confidence            45579999999988777  999999999999998888999999732  4899999999998765

>1uj0_A Signal transducing adaptor molecule (SH3 domain and ITAM motif) 2; STAM, SH3, GRB2, GADS, PXXP, HRS, endocytosis, early endosome, signaling protein/signaling protein complex; 1.70A {Mus musculus} SCOP: b.34.2.1

Probab=99.71  E-value=2.7e-17  Score=91.62  Aligned_cols=56  Identities=20%  Similarity=0.503  Sum_probs=50.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      ....++|+|+|.++..+  +|+|++||+|.|+.+.+++||.++. .|+.|+||++||+.
T Consensus         4 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~   59 (62)
T 1uj0_A            4 MARRVRALYDFEAVEDN--ELTFKHGELITVLDDSDANWWQGEN-HRGTGLFPSNFVTT   59 (62)
T ss_dssp             CCEEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEES
T ss_pred             CCeEEEECccCCCCCcC--CcCCCCCCEEEEEEeCCCCEEEEEE-CCCEEEechhHEEE
Confidence            45678999999988777  9999999999999998889999998 67899999999975

>1zlm_A Osteoclast stimulating factor 1; beta barrel, signaling protein; 1.07A {Homo sapiens}

Probab=99.71  E-value=3.5e-17  Score=90.01  Aligned_cols=54  Identities=24%  Similarity=0.655  Sum_probs=49.5

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      .+++|+|+|.+..++  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||++
T Consensus         4 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~   57 (58)
T 1zlm_A            4 KVFRALYTFEPRTPD--ELYFEEGDIIYITDMSDTNWWKGTS-KGRTGLIPSNYVAE   57 (58)
T ss_dssp             EEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEE
T ss_pred             EEEEECccCCCCCCC--CccCCCCCEEEEEEeCCCCEEEEEE-CCCEEEEehHHEEe
Confidence            468999999988776  9999999999999998889999997 89999999999975

>2ed0_A ABL interactor 2; coiled coil, cytoskeleton, nuclear protein, phosphorylation, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.71  E-value=4e-17  Score=94.84  Aligned_cols=58  Identities=26%  Similarity=0.547  Sum_probs=52.2

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      .+++|+|+|+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+...
T Consensus        18 ~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~~   75 (78)
T 2ed0_A           18 EKVVAIYDYTKDKED--ELSFQEGAIIYVIKKNDDGWYEGVM-NGVTGLFPGNYVESISGP   75 (78)
T ss_dssp             EEEEECSCBCCSSTT--BCCBCSSCEEEEEEECSSSEEEEEE-TTEEEEEETTSEEECSSS
T ss_pred             EEEEECccCCccCcC--cccccCCCEEEEEEeCCCCEEEEEE-CCcEEEeChHHEEEcCCC
Confidence            468999999988777  9999999999999998889999995 899999999999987653

>1wxb_A Epidermal growth factor receptor pathway substrate 8-like protein; SH3, EPS8, EPS8L2, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.71  E-value=1.9e-17  Score=93.87  Aligned_cols=58  Identities=24%  Similarity=0.519  Sum_probs=51.5

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|++...+  +|+|++||+|.|++++ ++||.+++.+|+.|+||++||+.+..
T Consensus         7 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~~~~~~g~~G~~P~~yv~~~~~   64 (68)
T 1wxb_A            7 GKYVKILYDFTARNAN--ELSVLKDEVLEVLEDG-RQWWKLRSRSGQAGYVPCNILGEASG   64 (68)
T ss_dssp             CCCEECSSCBCCSSSS--BCCBCTTCEEEEEECS-SSEEEEECTTSCEEEEETTTCCBCCC
T ss_pred             CEEEEECccCCCCCCC--ccCCCCCCEEEEEEcC-CCEEEEEECCCCEEEEEHHHeEECCC
Confidence            4468999999988777  9999999999999985 78999998789999999999987654

>1ruw_A Myosin-3 isoform, MYO3; SH3 domain, yeast, high-throughput, structural genomics, contractIle protein; 1.80A {Saccharomyces cerevisiae} PDB: 2btt_A 1va7_A

Probab=99.71  E-value=4.3e-17  Score=92.52  Aligned_cols=58  Identities=21%  Similarity=0.461  Sum_probs=51.2

Q ss_pred             EEEEEEeccC-CCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC-CcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFD-YSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~-~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~-g~~G~vP~~yv~~~~~   65 (101)
                      ..++|+|+|+ +...+  +|+|++||+|.|+.+.+++||.++... |+.|+||++||+.+..
T Consensus         3 ~~~~alydy~~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~~   62 (69)
T 1ruw_A            3 PKFEAAYDFPGSGSSS--ELPLKKGDIVFISRDEPSGWSLAKLLDGSKEGWVPTAYMTPYKD   62 (69)
T ss_dssp             SEEEESSCBCCCSCTT--BCCBCTTCEEEEEEECTTSEEEEEETTSSCEEEEEGGGEEECCS
T ss_pred             cEEEEccccCCCCCCC--cccCCCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEEcCC
Confidence            4689999996 87666  999999999999999888999999854 8999999999997654

>1tg0_A BBC1 protein, myosin tail region-interacting protein MTI1; yeast, SH3 domain, structural genomics, contractIle protein; 0.97A {Saccharomyces cerevisiae} PDB: 1zuk_A 1wdx_A

Probab=99.71  E-value=2.9e-17  Score=93.05  Aligned_cols=57  Identities=12%  Similarity=0.274  Sum_probs=50.0

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CC---cEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SG---KPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g---~~G~vP~~yv~~~   63 (101)
                      ...++|+|+|+++..+  +|+|++||+|.|+++.+++||.++.. .|   +.|+||++||+.+
T Consensus         7 ~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~~~~G~fP~~yv~~~   67 (68)
T 1tg0_A            7 PFKVVAQFPYKSDYED--DLNFEKDQEIIVTSVEDAEWYFGEYQDSNGDVIEGIFPKSFVAVQ   67 (68)
T ss_dssp             SEEEEESSCBCCSCTT--BCCBCTTCEEEEEEECSSSEEEEEEECTTSCEEEEEEEGGGEEEC
T ss_pred             CEEEEECeeECcCCcC--CCCCCCCCEEEEEEecCCCeEEEEECCCCCCCEEEEEchHHEEEC
Confidence            4479999999988777  99999999999999988899999973 34   8999999999864

>2yuo_A CIP85, RUN and TBC1 domain containing 3; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.71  E-value=4.9e-17  Score=94.39  Aligned_cols=59  Identities=22%  Similarity=0.407  Sum_probs=53.0

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|+++..+  +|+|++||+|.|+.+.+.+||.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   64 (78)
T 2yuo_A            6 SGRRAKALLDFERHDDD--ELGFRKNDIITIISQKDEHCWVGEL-NGLRGWFPAKFVEVLDE   64 (78)
T ss_dssp             CCEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEECC
T ss_pred             CceEEEECccCCCCCCC--CccCCCCCEEEEEEecCCCEEEEEE-CCCEEEEehHHEEECCC
Confidence            45679999999988777  9999999999999998889999986 79999999999998765

>2dbk_A CRK-like protein; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.71  E-value=7e-17  Score=95.84  Aligned_cols=59  Identities=14%  Similarity=0.187  Sum_probs=51.7

Q ss_pred             CcEEEEEEeccCCC--CCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYS--TKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~--~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|++.  ..+  +|+|++||+|.|+.+.+.+||.++. +|+.|+||++||+.+..
T Consensus        15 ~~~~~~alydy~~~a~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~fP~~yv~~~~~   75 (88)
T 2dbk_A           15 GPVFAKAIQKRVPCAYDKT--ALALEVGDIVKVTRMNINGQWEGEV-NGRKGLFPFTHVKIFDP   75 (88)
T ss_dssp             CCEEEEECSCBCCCTTCSS--BCCBCTTCEEEEEEECTTSCEEEEC-SSCEEEECTTTEEECCS
T ss_pred             CCEEEEEcccccCCCCCCC--cccCCCCCEEEEEEecCCCEEEEEe-CCCEEEEehHHeEECCC
Confidence            44579999999965  555  9999999999999998889999976 78999999999998764

>2yuq_A Tyrosine-protein kinase ITK/TSK; T-cell-specific kinase, tyrosine-protein kinase LYK, kinase EMT, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.71  E-value=3.3e-17  Score=96.66  Aligned_cols=58  Identities=24%  Similarity=0.571  Sum_probs=52.5

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ..+++|+|+|+++..+  +|+|++||+|.|+++.+++||.++..+|+.|+||++||+...
T Consensus        19 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~   76 (85)
T 2yuq_A           19 ETVVIALYDYQTNDPQ--ELALRRNEEYCLLDSSEIHWWRVQDRNGHEGYVPSSYLVEKS   76 (85)
T ss_dssp             SCEEEESSCCCCSCSS--BCCCCBTEEEEEEECCSSSEEEEECSSSCEEEEETTTCEECC
T ss_pred             CeEEEECcCCCCCCCC--cCCCCCCCEEEEEEecCCCeEEEEECCCCEEEEehHHeEEcc
Confidence            4578999999988777  999999999999999888999998878999999999999864

>4ag1_C Fynomer; hydrolase-de novo protein complex, inhibitor, serine proteas; 1.40A {Synthetic construct} PDB: 4afz_C 4ag2_C* 4afq_C* 4afs_C 4afu_C 1azg_B 1nyf_A 1nyg_A 1a0n_B 3ua7_A 3ua6_A 1fyn_A 1m27_C* 1shf_A 1zbj_A 1efn_A 1avz_C 1nlo_C* 1nlp_C* 1qwe_A ...

Probab=99.71  E-value=3.5e-17  Score=96.52  Aligned_cols=62  Identities=23%  Similarity=0.540  Sum_probs=54.1

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccccC
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKKLS   67 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~~~   67 (101)
                      +..+++|+|+|.++..+  +|+|++||+|.|+.+.+++||.++. .+|+.|+||++||+.+....
T Consensus         5 ~~~~~~Alydy~a~~~~--eLsf~~Gd~i~vl~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~~   67 (84)
T 4ag1_C            5 GVTLFVALYDYNATRWT--DLSFHKGEKFQILEFGPGDWWEARSLTTGETGYIPSNYVAPVDSIQ   67 (84)
T ss_dssp             -CCEEEESSCBCCSBTT--BCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEETTTCC
T ss_pred             CCEEEEEcccCCCCCCC--cccccCCCEEEEEEecCCCeEEEEECCCCCEEEEehHHeEECCCcc
Confidence            44578999999988777  9999999999999998889999998 47899999999999876643

>1wx6_A Cytoplasmic protein NCK2; SH3 domain, structural genomics, signal transduction, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens}

Probab=99.71  E-value=4.1e-17  Score=97.26  Aligned_cols=58  Identities=28%  Similarity=0.608  Sum_probs=52.1

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEc--CCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK--TNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~--~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|+|+++..+  +|+|++||+|.|+++  .+.+||.+++.+|+.||||++||+.+..
T Consensus        18 ~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   77 (91)
T 1wx6_A           18 HVVQTLYPFSSVTEE--ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSD   77 (91)
T ss_dssp             EEEEESSCCCCSSSS--BCCCCTTCEEEEEECCSSCTTEEEEECTTCCEEEEEGGGEEEEEE
T ss_pred             EEEEEeecCCcCCCC--cccCCCCCEEEEEECCCCCCCcEEEEeCCCCEEEEchHHEEECCC
Confidence            468999999988777  999999999999998  5779999997789999999999998765

>2oaw_A Spectrin alpha chain, brain; SH3 domain, chimera, structural protein; 1.90A {Gallus gallus} PDB: 2rot_A 2rmo_A 2kr3_A

Probab=99.71  E-value=2.6e-17  Score=92.18  Aligned_cols=56  Identities=34%  Similarity=0.656  Sum_probs=49.7

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC---C----CcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS---S----GKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~---~----g~~G~vP~~yv~~~   63 (101)
                      .+++|+|+|.++.++  +|+|++||+|.|+.+.+++||.++..   +    |+.|+||++||+.+
T Consensus         2 ~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~~~g~~~g~~G~~P~~yv~~l   64 (65)
T 2oaw_A            2 ELVLALYDYQEKSPR--EVTMKKGDILTLLNSTNKDWWKVEVKITVNGKTYERQGFVPAAYVKKL   64 (65)
T ss_dssp             EEEEECSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEEEEEEETTEEEEEEEEEEGGGEEEC
T ss_pred             cEEEEcccCCccCCC--CCCCCCCCEEEEEEcCCCCEEEEEEccccCCCcCCcEEEEchHHeEEc
Confidence            468999999988777  99999999999999988899999874   1    78999999999864

>1uhc_A KIAA1010 protein; beta barrel, SH3, human cDNA, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.71  E-value=4e-17  Score=95.00  Aligned_cols=58  Identities=21%  Similarity=0.507  Sum_probs=51.2

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC----CCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN----KDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~----~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|+++..+  +|+|++||+|.|+.+.+    .+||.++. +|+.|+||++||+.+..
T Consensus        13 ~~~~~Alydy~~~~~~--eLs~~~Gd~i~vl~~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   74 (79)
T 1uhc_A           13 NQVYFAVYTFKARNPN--ELSVSANQKLKILEFKDVTGNTEWWLAEV-NGKKGYVPSNYIRKTES   74 (79)
T ss_dssp             SCCEEESSCBCCCSSS--BCCBCTTCEEEEEESCCTTSCTTEEEEES-SSCEEEEEGGGEEECCS
T ss_pred             CeEEEECccCCCCCCC--ccCCCCCCEEEEEECCCCCCCCCeEEEEe-CCCEEEEchHHeEECCC
Confidence            3468999999998777  99999999999999876    78999984 88999999999998654

>2j05_A RAS GTPase-activating protein 1; GTPase activation, SH3 domain, SH2 domain, SRC homology 3, RAS signaling pathway, proto- oncogene, phosphorylation; 1.5A {Homo sapiens} PDB: 2j06_A

Probab=99.71  E-value=4.4e-17  Score=91.56  Aligned_cols=57  Identities=11%  Similarity=0.246  Sum_probs=50.4

Q ss_pred             EEEEEEeccCC-CCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEecc
Q psy6758           6 VTLKVLYDFDY-STKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYK   64 (101)
Q Consensus         6 ~~~~aly~f~~-~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~   64 (101)
                      ..++|+|+|.+ +..+  +|+|++||+|.|+.+.+++||.+++ .+|+.|+||++||+.+.
T Consensus         6 ~~~~alydy~~~~~~~--eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~~~   64 (65)
T 2j05_A            6 RRVRAILPYTKVPDTD--EISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVG   64 (65)
T ss_dssp             CEEEESSCBCCCTTSS--BCCBCTTCEEEEEEECTTSEEEEEETTTCCEEEEEGGGEEECC
T ss_pred             cEEEEccccCCCCCCC--cCcCCCCCEEEEeEecCCCEEEEEECCCCCEEEEEhHHeEECc
Confidence            46899999998 7666  9999999999999998889999995 46899999999998753

>1neg_A Spectrin alpha chain, brain; SH3-domain fold, five antiparallel beta sheets, structural protein; 2.30A {Gallus gallus} SCOP: b.34.2.1

Probab=99.71  E-value=4.1e-17  Score=96.14  Aligned_cols=59  Identities=32%  Similarity=0.620  Sum_probs=51.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|||++...+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+..
T Consensus        16 ~~~~~~Alydy~a~~~~--eLsf~~Gd~i~Vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~   74 (83)
T 1neg_A           16 GKELVLALYDYQEKSPR--EVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKLAA   74 (83)
T ss_dssp             -CCEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECCT
T ss_pred             CceEEEEccccCCCCCC--ccccCCCCEEEEEEecCCCEEEEEE-CCeEEEEEHHHEEECCC
Confidence            34568999999988777  9999999999999998889999965 89999999999998754

>2dm1_A Protein VAV-2; RHO family guanine nucleotide exchange factor, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=3.9e-17  Score=93.76  Aligned_cols=60  Identities=20%  Similarity=0.410  Sum_probs=52.4

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....+++|+|+|+++..+  +|+|++||+|.|+.+.  +++||.++. +|+.|+||++||+.+..
T Consensus         5 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   66 (73)
T 2dm1_A            5 SSGGTAVARYNFAARDMR--ELSLREGDVVRIYSRIGGDQGWWKGET-NGRIGWFPSTYVEEEGI   66 (73)
T ss_dssp             CSSSEEEESSCBCCCSTT--BCCBCTTCEEECCBSSSSSSSCEEEEE-TTEEEEECSSSEEECCC
T ss_pred             CCCCEEEECccCCcCCCC--cCCCCCCCEEEEEEecCCCCCeEEEEE-CCeEEEeehHHEEEcCC
Confidence            345579999999988777  9999999999999987  448999996 89999999999998764

>2cub_A Cytoplasmic protein NCK1; SH3 domain, NCK1 adaptor, tyrosine kinase, signal transduction, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=4.5e-17  Score=96.71  Aligned_cols=60  Identities=18%  Similarity=0.431  Sum_probs=54.0

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +....++|+|+|+++..+  +|+|++||+|.|+.+.+++||+++. +|+.|+||++||+.+..
T Consensus        15 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~   74 (88)
T 2cub_A           15 DLNMPAYVKFNYMAERED--ELSLIKGTKVIVMEKCSDGWWRGSY-NGQVGWFPSNYVTEEGD   74 (88)
T ss_dssp             CCCEEEEESSCCCCCSTT--BCCCCTTEEEEEEEECTTSEEEEEE-TTEEEEEEGGGEEECCC
T ss_pred             CCCCEEEEccccCCCCCC--CcCCCCCCEEEEEEccCCCeEEEEE-CCcEEEEehHHEEECCC
Confidence            345679999999988777  9999999999999998889999998 89999999999998754

>1zuu_A BZZ1 protein; SH3 domain, unknown function; 0.97A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.70  E-value=1.5e-17  Score=91.32  Aligned_cols=54  Identities=26%  Similarity=0.560  Sum_probs=48.3

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC-CCceEEEcC-CCcEEEEcCCceE
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRS-SGKPFYVPASYVE   61 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~-~~Ww~~~~~-~g~~G~vP~~yv~   61 (101)
                      ..++|+|+|+++.++  +|+|++||+|.|+.+.+ ++||.++.. +|+.|+||++||+
T Consensus         2 ~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~g~~~~~g~~G~~P~~yv~   57 (58)
T 1zuu_A            2 MENKVLYAYVQKDDD--EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIR   57 (58)
T ss_dssp             -CCEECSCBCCCSTT--BCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEE
T ss_pred             CEEEEeeeECCcCCC--cccCCCCCEEEEeEcCCCCCCEEEEECCCCCEEEEEHHHEE
Confidence            357999999988777  99999999999999886 799999986 7899999999996

>2ecz_A Sorbin and SH3 domain-containing protein 1; glycoprotein, membrane, nuclear protein, phosphorylation, polymorphism, transport, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=2.2e-17  Score=93.94  Aligned_cols=61  Identities=16%  Similarity=0.382  Sum_probs=53.1

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC-CcEEEEcCCceEecccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASYVEVYKKL   66 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~-g~~G~vP~~yv~~~~~~   66 (101)
                      ....++|+|+|+++..+  +|+|++||+|.|+++.+++||.++... |+.|+||++||+.+...
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~~   67 (70)
T 2ecz_A            6 SGGEAIAKFNFNGDTQV--EMSFRKGERITLLRQVDENWYEGRIPGTSRQGIFPITYVDVISGP   67 (70)
T ss_dssp             CCBCEEESSCCCCCSTT--BCCCCTTCBCEEEEEEETTEEEEEETTTTEEEEECTTTEEESSSC
T ss_pred             CCCEEEECccCCCCCcC--CcCCCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHEEECCCC
Confidence            44568999999988777  999999999999998878999999853 68999999999987653

>1x6g_A Megakaryocyte-associated tyrosine-protein kinase; MATK, CTK, HYL, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=7.4e-17  Score=94.43  Aligned_cols=61  Identities=10%  Similarity=0.214  Sum_probs=52.3

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCC-CceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~-~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      .....++|+|+|++..++  +|+|++||+|.|+++.++ +||.+++ .+|+.|+||++||+....
T Consensus        15 ~~~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   77 (81)
T 1x6g_A           15 APGTQCITKCEHTRPKPG--ELAFRKGDVVTILEACENKSWYRVKHHTSGQEGLLAAGALRERSG   77 (81)
T ss_dssp             CTTCEEEESSCBSSCCTT--CCCBCTTCEEEEEECCCSSSEEEEEETTTCCEEEEEGGGEEECCC
T ss_pred             CCCCEEEECCCCCcCCCC--CCCCCCCCEEEEEeccCCCCeEEEEeCCCCCEEEEehHHEEEccc
Confidence            344579999999988777  999999999999998765 8999997 378999999999987654

>2k9g_A SH3 domain-containing kinase-binding protein 1; CIN85, adaptor protein, downregulation, CBL, apoptosis, junction, cytoplasmic vesicle, cytoskeleton; NMR {Homo sapiens}

Probab=99.70  E-value=6.2e-17  Score=92.81  Aligned_cols=59  Identities=24%  Similarity=0.513  Sum_probs=52.6

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|.++..+  +|+|++||+|.|+.+.  +++||.++. +|+.|+||++||+.+..
T Consensus         8 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~~   68 (73)
T 2k9g_A            8 SKDYCKVIFPYEAQNDD--ELTIKEGDIVTLINKDCIDVGWWEGEL-NGRRGVFPDNFVKLLPP   68 (73)
T ss_dssp             SCEEEEECSCBCCSSTT--BCCBCTTCEEEEEECCSSSTTEEEEEE-TTEEEEEEGGGEEECCS
T ss_pred             CccEEEECccCCCCCCC--eeeECCCCEEEEEECCCCCCCEEEEEE-CCeEEEEchHHEEECCc
Confidence            45578999999998777  9999999999999985  789999997 89999999999998764

>2yun_A Nostrin; nitric oxide synthase trafficker, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=1e-16  Score=93.17  Aligned_cols=59  Identities=27%  Similarity=0.504  Sum_probs=53.0

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|++...+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   64 (79)
T 2yun_A            6 SGRLCKALYSFQARQDD--ELNLEKGDIVIIHEKKEEGWWFGSL-NGKKGHFPAAYVEELPS   64 (79)
T ss_dssp             CSEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSCEEEES-SSCEEEECSTTEEEESS
T ss_pred             CCCEEEECccCCcCCCC--CcCCCCCCEEEEEEcCCCCEEEEEE-CCCEEEEEhHHeEECCC
Confidence            45679999999988777  9999999999999998889999995 89999999999998765

>4f14_A Nebulette; SH3 domain, heart muscle, actin-binding protein-peptide COMP; 1.20A {Homo sapiens} PDB: 1ark_A 1neb_A 3i35_A

Probab=99.70  E-value=4.1e-17  Score=91.06  Aligned_cols=56  Identities=21%  Similarity=0.504  Sum_probs=50.3

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~   63 (101)
                      ..++|+|+|.++..+  +|+|++||+|.|+.+.+++||.++.. +|+.|+||++||+.+
T Consensus         7 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~   63 (64)
T 4f14_A            7 RTYRAMYDYSAQDED--EVSFRDGDYIVNVQPIDDGWMYGTVQRTGRTGMLPANYIEFV   63 (64)
T ss_dssp             -CEEESSCBCCCSTT--BCCBCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             EEEEECeeeCCcCCC--cCCCCCCCEEEEEEeCCCCeEEEEECCCCCEEEEeHHHeEEC
Confidence            358999999988777  99999999999999988899999986 789999999999875

>2ege_A Uncharacterized protein KIAA1666; SH3 domain, KIAA1666 protein, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=6.4e-17  Score=93.39  Aligned_cols=58  Identities=14%  Similarity=0.250  Sum_probs=51.0

Q ss_pred             cEEEEEEeccCCCC-------CCCCCccccCCCEEEEEEc-CCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYST-------KDGKYVRIQEGEKLFLIKK-TNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~-------~~~~eLs~~~g~~l~vl~~-~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|+++.       .+  +|+|++||+|.|+.+ .+++||.++. +|+.|+||++||+.++.
T Consensus         7 ~~~~~Alydy~~~~~~~~~~~~~--eLsf~~Gd~i~v~~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~~   72 (75)
T 2ege_A            7 GKIMIAALDYDPGDGQMGGQGKG--RLALRAGDVVMVYGPMDDQGFYYGEL-GGHRGLVPAHLLDHMSL   72 (75)
T ss_dssp             SEEEEESSCBCTTTTCCCSSSCC--BCCBCTTCEEEEESCCCTTCEEEEES-SSCEEEEETTTEEECCC
T ss_pred             CcEEEECCCCCCCccccCCCCCC--cceECCCCEEEEeEccCCCCEEEEEE-CCcEEEEChHHeEEccC
Confidence            45789999999987       55  999999999999974 6789999998 89999999999998753

>2ct4_A CDC42-interacting protein 4; thyroid receptor interacting protein 10, SH3 domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=7.4e-17  Score=91.79  Aligned_cols=58  Identities=31%  Similarity=0.542  Sum_probs=51.0

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC-CCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~-~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|+|+++.++  +|+|++||+|.|+++.+ ++||.++..+|+.|+||++||+.+..
T Consensus         8 ~~~~alydy~~~~~~--eLs~~~Gd~i~vl~~~~~~gW~~~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2ct4_A            8 GHCVAIYHFEGSSEG--TISMAEGEDLSLMEEDKGDGWTRVRRKEGGEGYVPTSYLRVTSG   66 (70)
T ss_dssp             CEEEESSCBCCCSTT--CCCBCTTCEEEEEECCSSSCEEEEECSSSCEEEEEGGGEEECCC
T ss_pred             CEEEEcccCCCCCCC--cCCCCCCCEEEEEeccCCCCeEEEEeCCCCEEEEEhHHeEEcCC
Confidence            468999999988777  99999999999999874 45999998668999999999998654

>1x69_A Cortactin isoform A; SH3 domain, CTTN, oncogene EMS1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=5.5e-17  Score=94.43  Aligned_cols=59  Identities=24%  Similarity=0.502  Sum_probs=52.8

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|+++..+  +|+|++||+|.|+.+.+.+||.++. +|+.|+||++||+.+..
T Consensus        16 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   74 (79)
T 1x69_A           16 LGITAVALYDYQAAGDD--EISFDPDDIITNIEMIDDGWWRGVC-KGRYGLFPANYVELRQS   74 (79)
T ss_dssp             CCCCEEESSCCCCSSSS--BCCCCTTCEEEEEEECSSSEEEEEE-TTEEEEEETTSEEECCC
T ss_pred             CCeEEEECccCCCCCCC--CcCcCCCCEEEEeEecCCCeEEEEE-CCcEEEechHHEEECCC
Confidence            44568999999988777  9999999999999998889999996 89999999999998765

>2l0a_A STAM-1, signal transducing adapter molecule 1; structural genomics, northeast structural genomics consortiu PSI-2, protein structure initiative; NMR {Homo sapiens}

Probab=99.70  E-value=4.2e-17  Score=93.73  Aligned_cols=56  Identities=16%  Similarity=0.497  Sum_probs=49.9

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      ....++|+|+|+++..+  +|+|++||+|.|+.+.+++||.++. .|+.|+||++||++
T Consensus        16 ~~~~~~Alydy~a~~~~--eLsf~~Gd~i~Vl~~~~~gWw~g~~-~g~~G~fP~~yV~~   71 (72)
T 2l0a_A           16 EARKVRAIYDFEAAEDN--ELTFKAGEIITVLDDSDPNWWKGET-HQGIGLFPSNFVTA   71 (72)
T ss_dssp             CCEEEEESSCBCCSSTT--BCCBCTTCEEEEEEEEETTEEEEEC-SSCEEECTTCCEEE
T ss_pred             CCeEEEECCccCCCCCC--ccCCCCCCEEEEEEecCCCEEEEEE-CCCEEEechhhCcc
Confidence            34578999999988777  9999999999999988889999997 67899999999974

>2a28_A BZZ1 protein; SH3 domain, signaling protein; 1.07A {Saccharomyces cerevisiae}

Probab=99.70  E-value=3.2e-17  Score=88.97  Aligned_cols=52  Identities=19%  Similarity=0.428  Sum_probs=47.4

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCC-CCceEEEcCCCcEEEEcCCceE
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVE   61 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~-~~Ww~~~~~~g~~G~vP~~yv~   61 (101)
                      .++|+|+|+++.++  +|+|++||+|.|+.+.+ ++||.++. +|+.|+||++||+
T Consensus         2 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~g~~-~g~~G~~P~~yv~   54 (54)
T 2a28_A            2 AMEAIYAYEAQGDD--EISIDPGDIITVIRGDDGSGWTYGEC-DGLKGLFPTSYCK   54 (54)
T ss_dssp             EEEBCSCBCCCSTT--BCCBCTTCEEEEEECCCSSSEEEEEE-TTEEEEEEGGGBC
T ss_pred             EEEECccCCcCCCC--CccCCCCCEEEEEEecCCCCEEEEEE-CCeEEEeeHHHcC
Confidence            47899999998777  99999999999999985 78999998 8999999999984

>2dlp_A KIAA1783 protein; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=5.8e-17  Score=95.57  Aligned_cols=58  Identities=14%  Similarity=0.167  Sum_probs=52.2

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEc--CCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK--TNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~--~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|||+|+++..+  +|+|++||+|.|+.+  .+++||.++. +|+.|+||++||+.+..
T Consensus         8 ~~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~fP~~yv~~~~~   67 (85)
T 2dlp_A            8 SGYVIALRSYITDNCS--LLSFHRGDLIKLLPVATLEPGWQFGSA-GGRSGLFPADIVQPAAA   67 (85)
T ss_dssp             CCEEEESSCBCCSSSS--BCCBCTTCEEEECCCSCCCTTEEEEES-SSCEEEEETTSEEECCC
T ss_pred             CEEEEECCCCCccCcC--CccCcCCCEEEEEEccCCCCCeEEEEE-CCEEEEechHHeEECCC
Confidence            4578999999988777  999999999999997  7889999997 88999999999998765

>2dnu_A RUH-061, SH3 multiple domains 1; RSGI, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=4.2e-17  Score=93.01  Aligned_cols=59  Identities=24%  Similarity=0.461  Sum_probs=52.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|.++..+  +|+|++||+|.|+++.+++||.++.. |+.|+||++||+.+..
T Consensus         7 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~-g~~G~~P~~yv~~~~~   65 (71)
T 2dnu_A            7 GEEKYVTVQPYTSQSKD--EIGFEKGVTVEVIRKNLEGWWYIRYL-GKEGWAPASYLKKAKD   65 (71)
T ss_dssp             CSEEEECSSCBCCSSTT--BCCBCTTCEEEECCCCSSSEEEEEET-TEEEEEEGGGCEECCC
T ss_pred             CCCEEEECCccCCCCCC--CCcCCCCCEEEEeECCCCCeEEEEEC-CcEEEEEHHHeEEccC
Confidence            44578999999988777  99999999999999988899999985 9999999999998764

>1ue9_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.70  E-value=1.5e-16  Score=92.68  Aligned_cols=60  Identities=20%  Similarity=0.367  Sum_probs=52.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC----CcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS----GKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~----g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+++.+++||.++...    ++.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~gWw~g~~~~~g~~~~~G~fP~~yv~~~~~   69 (80)
T 1ue9_A            6 SGEIAQVTSAYVASGSE--QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGP   69 (80)
T ss_dssp             CCEEEEECSCCCCCSTT--BCCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECCS
T ss_pred             CCeEEEECcccCCCCCC--CCCCCCCCEEEEEEecCCCcEEEEECCCCCCCcEEEEchHHeEECCC
Confidence            45679999999988777  999999999999999888999999853    4899999999998764

>2egc_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=8.5e-17  Score=92.87  Aligned_cols=58  Identities=17%  Similarity=0.362  Sum_probs=51.1

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC---CCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS---SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~---~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|+|+|+++ .+  +|+|++||+|.|+++.+++||.++..   +|+.|+||++||+.+..
T Consensus        10 ~~~~~alydy~~~-~~--eLs~~~Gd~i~vl~~~~~gWw~g~~~~~~~g~~G~~P~~yv~~~~~   70 (75)
T 2egc_A           10 KDVYVSIADYEGD-EE--TAGFQEGVSMEVLERNPNGWWYCQILDGVKPFKGWVPSNYLEKKNS   70 (75)
T ss_dssp             CEEEEECSCBCCC-SS--SCCBCTTCEEEECEECTTSEEEEEECCSSSCEEEEEEGGGEEECCS
T ss_pred             CeEEEECCCcCCC-CC--cCCCCCCCEEEEEEcCCCCeEEEEeCCCCCCcEEEEehHHCEECCC
Confidence            4568999999987 66  99999999999999988899999985   35899999999998764

>1x2q_A Signal transducing adapter molecule 2; SH3 domain, signal transducing adaptor molecule, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.70  E-value=7.6e-17  Score=95.64  Aligned_cols=58  Identities=17%  Similarity=0.474  Sum_probs=52.0

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|||+|+++..+  +|+|++||+|.|+.+.+++||.++. .|+.|+||++||+.+..
T Consensus        17 ~~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   74 (88)
T 1x2q_A           17 ARKVRALYDFEAVEDN--ELTFKHGEIIIVLDDSDANWWKGEN-HRGIGLFPSNFVTTNLN   74 (88)
T ss_dssp             CEEEEESSCCCCCSSS--CCCCCSSCEEEEEECSCSSSEEEEE-TTEEEEECGGGEESCSS
T ss_pred             CeEEEEcccCCCCCcC--ccCCCCCCEEEEEEeCCCCEEEEEE-CCcEEEEehHHEEEcCC
Confidence            4578999999988777  9999999999999998889999998 68899999999997654

>3u23_A CD2-associated protein; structural genomics, structural genomics consortium, SGC, BE barrel, adaptor protein, protein binding; 1.11A {Homo sapiens} PDB: 2krn_A

Probab=99.70  E-value=3.6e-17  Score=91.54  Aligned_cols=58  Identities=17%  Similarity=0.414  Sum_probs=51.0

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ...+++|+|+|.+...+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+.
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~   63 (65)
T 3u23_A            6 KKRQCKVLFEYIPQNED--ELELKVGDIIDINEEVEEGWWSGTL-NNKLGLFPSNFVKELE   63 (65)
T ss_dssp             --CEEEECSCBCCSSTT--BCCBCTTCEEEEEEEEETTEEEEEE-TTEEEEEEGGGEEECC
T ss_pred             CCeEEEEeeeeCCCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCCEEEeehHHEEECc
Confidence            34578999999988777  9999999999999998889999995 8999999999999865

>2dil_A Proline-serine-threonine phosphatase-interacting protein 1; SH3 domain, PEST phosphatase-interacting protein 1, CD2- binding protein 1; NMR {Homo sapiens}

Probab=99.70  E-value=5e-17  Score=92.28  Aligned_cols=58  Identities=29%  Similarity=0.607  Sum_probs=52.1

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|+|+|+++..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+..
T Consensus         8 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   65 (69)
T 2dil_A            8 AQEYRALYDYTAQNPD--ELDLSAGDILEVILEGEDGWWTVER-NGQRGFVPGSYLEKLSG   65 (69)
T ss_dssp             CCEEECCSCBCCSSSS--SCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGCCBCCC
T ss_pred             CcEEEECccCCccCcC--ccCCCCCCEEEEEECCCCCEEEEEE-CCCEEEEehHHeEEcCC
Confidence            4468999999988777  9999999999999998889999998 69999999999987654

>2gqi_A RAS GTPase-activating protein 1; GAP, RAS P21 protein activator, P120GAP, rasgap, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.69  E-value=2.1e-17  Score=94.42  Aligned_cols=59  Identities=10%  Similarity=0.239  Sum_probs=52.0

Q ss_pred             cEEEEEEeccCC-CCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDY-STKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~-~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|||+|.+ +..+  +|+|++||+|.|+.+.+++||.+++ .+|+.|+||++||+.+..
T Consensus         7 ~~~~~Alydy~~~~~~~--eLsf~~Gd~i~v~~~~~~~W~~g~~~~~g~~G~~P~~yv~~~~~   67 (71)
T 2gqi_A            7 GRRVRAILPYTKVPDTD--EISFLKGDMFIVHNELEDGWMWVTNLRTDEQGLIVEDLVEEVSG   67 (71)
T ss_dssp             CCCEEESSCCCCCTTSS--CCCCCTTCBCCCCEECSSSCEEEECTTTCCEEEECTTSEEECCC
T ss_pred             CCEEEECcccCCCCCCC--CCCCCCCCEEEEEEecCCCEEEEEECCCCCEEEeeHHHEEECCC
Confidence            346899999998 7666  9999999999999998889999995 578999999999998754

>2rf0_A Mitogen-activated protein kinase kinase kinase 10; MAP3K10, MLK2, SH3 domain, TKL kinase, MKN28, structural GEN structural genomics consortium, SGC; 2.00A {Homo sapiens}

Probab=99.69  E-value=5.7e-17  Score=96.67  Aligned_cols=55  Identities=16%  Similarity=0.537  Sum_probs=49.9

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC-----CCCceEEEcCCCcEEEEcCCceE
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVE   61 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-----~~~Ww~~~~~~g~~G~vP~~yv~   61 (101)
                      ...++|+|+|+++..+  ||+|++||+|.|+.+.     +++||.++..+|+.|+||++||+
T Consensus        29 ~~~~~Alydy~a~~~~--ELsf~~GD~I~Vl~~~~~~~~~~gWw~g~~~~g~~G~fP~nyV~   88 (89)
T 2rf0_A           29 GPVWTAVFDYEAAGDE--ELTLRRGDRVQVLSQDCAVSGDEGWWTGQLPSGRVGVFPSNYVA   88 (89)
T ss_dssp             CCEEEECSCBCCSSTT--BCCBCTTCEEEEEECCHHHHSSTTEEEEECTTCCEEEEEGGGEE
T ss_pred             CcEEEECCccCCCCCC--ccccCCCCEEEEEeccCCcccCCCEEEEEECCCCEEEEcHHHCc
Confidence            4578999999998777  9999999999999985     78999999878999999999996

>1uhf_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.69  E-value=2.8e-17  Score=93.48  Aligned_cols=59  Identities=19%  Similarity=0.413  Sum_probs=51.9

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .....++|+|+|+++..+  +|+|++||+|.|+++ +++||.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~g~~-~g~~G~~P~~yv~~~~~   64 (69)
T 1uhf_A            6 SGGEEYIALYPYSSVEPG--DLTFTEGEEILVTQK-DGEWWTGSI-GDRSGIFPSNYVKPKDS   64 (69)
T ss_dssp             CCSEEEECSSCBCCSSSS--BCCBCTTCEEEECEE-ETTEEEECS-TTCCEEECGGGCEECCC
T ss_pred             CCCCEEEEeeeECCCCcC--ccCCCCCCEEEEEEe-CCCEEEEEe-CCcEEEEchHHeEECCC
Confidence            455678999999988777  999999999999998 688999985 78999999999998765

>1zuy_A Myosin-5 isoform; SH3 domain, contractIle protein; 1.39A {Saccharomyces cerevisiae} PDB: 1yp5_A

Probab=99.69  E-value=5.7e-17  Score=88.95  Aligned_cols=54  Identities=17%  Similarity=0.428  Sum_probs=48.5

Q ss_pred             EEEEEecc-CCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC-CcEEEEcCCceEe
Q psy6758           7 TLKVLYDF-DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-GKPFYVPASYVEV   62 (101)
Q Consensus         7 ~~~aly~f-~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~-g~~G~vP~~yv~~   62 (101)
                      .++|+|+| .+...+  +|+|++||+|.|+.+.+++||.++... |+.|+||++||+.
T Consensus         2 ~~~al~d~~~~~~~~--eLs~~~Gd~i~v~~~~~~gW~~g~~~~~g~~G~~P~~yv~~   57 (58)
T 1zuy_A            2 MFEAAYDFPGSGSPS--ELPLKKGDVIYITREEPSGWSLGKLLDGSKEGWVPTAYMKP   57 (58)
T ss_dssp             EEEESSCBCCCSCTT--BCCBCTTCEEEEEEECTTSEEEEEESSCSCEEEEEGGGEEC
T ss_pred             EEEEecccCCCCCCC--cCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEecHHHEEE
Confidence            58999999 777666  999999999999999888999999853 8999999999974

>1spk_A RSGI RUH-010, riken cDNA 1300006M19; structural genomics, SH3 domain, five-stranded barrel, mouse cDNA; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.69  E-value=4.6e-17  Score=93.11  Aligned_cols=60  Identities=15%  Similarity=0.324  Sum_probs=52.0

Q ss_pred             CcEEEEEEeccCC-CCCCCCCccccCCCEEEEEEc-CCCCceEEEcC-CCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDY-STKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~-~~~~~~eLs~~~g~~l~vl~~-~~~~Ww~~~~~-~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|||+|.+ +..+  +|+|++||+|.|+.+ .+++||.++.. .|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~a~~~~~--eLs~~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~   68 (72)
T 1spk_A            6 SGQKVKTIFPHTAGNNKT--LLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSG   68 (72)
T ss_dssp             CSCEEECSSCBCCSSCSS--BCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECSS
T ss_pred             CceEEEEeeeeCCCCCCC--CCcCCCCCEEEEeEccCCCCcEEEEECCCCCEEEEehHHeEECCC
Confidence            4457899999995 6666  999999999999987 67899999985 38999999999998765

>3rnj_A Brain-specific angiogenesis inhibitor 1-associate 2; structural genomics, structural genomics consortium, SGC, BE barrel; HET: EDT; 1.50A {Homo sapiens} SCOP: b.34.2.1

Probab=99.69  E-value=5.2e-17  Score=91.72  Aligned_cols=58  Identities=16%  Similarity=0.313  Sum_probs=49.4

Q ss_pred             CcEEEEEEeccCCCCCCCCC-ccccCCCEEEEEEc-CCCCceEEEcC-CCcEEEEcCCceEec
Q psy6758           4 QDVTLKVLYDFDYSTKDGKY-VRIQEGEKLFLIKK-TNKDWWQVIRS-SGKPFYVPASYVEVY   63 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~e-Ls~~~g~~l~vl~~-~~~~Ww~~~~~-~g~~G~vP~~yv~~~   63 (101)
                      +..+++|+|+|.+...+  + |+|++||+|.|+.+ .+++||.+++. +|+.|+||+|||+.+
T Consensus         6 ~~~~~~al~dy~~~~~~--e~Lsf~~Gd~i~v~~~~~~~gW~~g~~~~~g~~G~fP~~yv~~l   66 (67)
T 3rnj_A            6 GRMRVKAIFSHAAGDNS--TLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPFSYTRVL   66 (67)
T ss_dssp             CCCEEEESSCBCCCSCT--TBCCBCTTCEEEECSSSCBTTEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             CCeEEEEccccCCCCCC--CCccCCCCCEEEEeeccCCCCCEEEEECCCCCEEEEEHHHeEEC
Confidence            45579999999987555  5 99999999999965 56799999964 789999999999875

>1nm7_A Peroxisomal membrane protein PAS20; yeast, PEX5P, PEX14P, PEX13P, import machine, SH3 domain, protein transport; NMR {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.69  E-value=3.5e-17  Score=93.42  Aligned_cols=55  Identities=29%  Similarity=0.678  Sum_probs=48.0

Q ss_pred             EEEEEeccCCCCCCCC-CccccCCCEEEEEEcCC-----CCceEEEcCCCcEEEEcCCceEec
Q psy6758           7 TLKVLYDFDYSTKDGK-YVRIQEGEKLFLIKKTN-----KDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~-eLs~~~g~~l~vl~~~~-----~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .++|+|+|.++.  +. ||+|++||+|.|+++.+     ++||+++..+|+.|+||+|||+.+
T Consensus         9 ~~~aly~y~a~~--~~dELsf~~Gd~i~Vl~~~~~~~~~~gWW~g~~~~G~~G~~PsnyV~~l   69 (69)
T 1nm7_A            9 FARALYDFVPEN--PEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII   69 (69)
T ss_dssp             CEEECSCCCCSS--TTSCCCCCTTCEEEECCSSSSSCCSSSCEEEEETTTEEEEECGGGEEEC
T ss_pred             EEEEEecccCCC--CCCccCCCCCCEEEEEecCCCCCCCCCeeEEEeCCCCEEEecHHHEEEC
Confidence            589999998863  34 99999999999999875     489999987899999999999853

>2cud_A SRC-like-adapter; SH3 domain, negative mitogenesis regulator, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.69  E-value=7.2e-17  Score=94.08  Aligned_cols=58  Identities=28%  Similarity=0.471  Sum_probs=50.5

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|||+|+++..+  +|+|++||+|.|++. +.+||.+++. +|+.|+||++||+.+..
T Consensus        17 ~~~~~Alydy~a~~~~--eLs~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~~P~~yv~~~~~   75 (79)
T 2cud_A           17 SDFLAVLSDYPSPDIS--PPIFRRGEKLRVISD-EGGWWKAISLSTGRESYIPGICVARVSG   75 (79)
T ss_dssp             CCEEEESSCSSCTTTS--CCSSCTTCEEEEEEE-ETTEEEEEETTTCCEEEEEGGGEEEECC
T ss_pred             CeEEEEccCCCCCCCC--cCCCCCCCEEEEEec-CCCeEEEEECCCCCEEEeeHHHeEEccC
Confidence            4478999999988777  999999999999984 6789999974 58999999999997654

>1x43_A Endophilin B1, SH3 domain GRB2-like protein B1; structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=99.69  E-value=9.2e-17  Score=93.88  Aligned_cols=59  Identities=22%  Similarity=0.429  Sum_probs=52.1

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|+++..+  ||+|++||+|.|+.+.  +.+||.++. +|+.|+||++||+.+..
T Consensus        16 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   76 (81)
T 1x43_A           16 NNRKARVLYDYDAANST--ELSLLADEVITVFSVVGMDSDWLMGER-GNQKGKVPITYLELLNS   76 (81)
T ss_dssp             CCEEEEESSCCCCSSTT--BCCCCTTCEEEEECCTTCCTTEEEEEE-TTEEEEEEGGGEEECCC
T ss_pred             CCeEEEEcccCCCCCCC--cCCCCCCCEEEEEEcCCCCCCcEEEEE-CCCEEEEehHHEEECCC
Confidence            44679999999998777  9999999999999984  579999995 89999999999998764

>1wi7_A SH3-domain kinase binding protein 1; beta barrel, SH3KBP1, RUK, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus}

Probab=99.69  E-value=1.8e-17  Score=93.91  Aligned_cols=59  Identities=14%  Similarity=0.421  Sum_probs=52.4

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|+++.++  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   64 (68)
T 1wi7_A            6 SGRRCQVAFSYLPQNDD--ELELKVGDIIEVVGEVEEGWWEGVL-NGKTGMFPSNFIKELSG   64 (68)
T ss_dssp             CCCCEEESSCBCCSSTT--BCCBCTTCEECCCEEEETTEEEECS-TTCCEEEETTSEEECCS
T ss_pred             CCCEEEECccCCcCCCC--CccCcCCCEEEEEEcCCCCeEEEEE-CCcEEEEchHHEEECCC
Confidence            34568999999998777  9999999999999988889999985 89999999999998765

>4glm_A Dynamin-binding protein; SH3 domain, DNMBP, structural genomics, structural genomics consortium, SGC, SRC homology 3 domains, cell junctions; 1.90A {Homo sapiens}

Probab=99.69  E-value=6.9e-17  Score=92.12  Aligned_cols=57  Identities=16%  Similarity=0.310  Sum_probs=51.1

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|+|.++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus        14 ~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~~   70 (72)
T 4glm_A           14 TYGVALYRFQALEPN--ELDFEVGDKIRILATLEDGWLEGSL-KGRTGIFPYRFVKLCPA   70 (72)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEEECSTTEEEEEE-TTEEEEEEGGGEEEEC-
T ss_pred             eEEEECccCCCCCCC--cCCCCCCCEEEEEEccCCCEEEEEE-CCcEEEEChHHeEECCC
Confidence            468999999988777  9999999999999998889999995 89999999999998754

>1ugv_A KIAA0621, olygophrenin-1 like protein; beta barrel, GRAF protein, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.69  E-value=3.2e-17  Score=93.96  Aligned_cols=59  Identities=19%  Similarity=0.263  Sum_probs=51.2

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEc-CCCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~-~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      ..+++|+|+|+++..+  +|+|++||+|.|+.+ .+.+||.++. +|+.|+||++||+.+...
T Consensus        10 ~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~~   69 (72)
T 1ugv_A           10 FRKAKALYACKAEHDS--ELSFTAGTVFDNVHPSQEPGWLEGTL-NGKTGLIPENYVEFLSGP   69 (72)
T ss_dssp             CCCEEESSCBCCCSSS--BCCBCTTCEEBSCCBCSSTTEEEEES-SSCEEEEEGGGEEECCSS
T ss_pred             ccEEEEccccCCcCCC--EeCCcCCCEEEEEEecCCCCeEEEEE-CCcEEEecHHHEEECCCC
Confidence            3468999999988776  999999999999985 5778999985 899999999999987653

>2kxc_A Brain-specific angiogenesis inhibitor 1-associate 2-like protein 1; IRTKS-SH3, espfu, complex structure, protein binding; NMR {Homo sapiens}

Probab=99.69  E-value=5.9e-17  Score=91.48  Aligned_cols=59  Identities=17%  Similarity=0.356  Sum_probs=50.7

Q ss_pred             CcEEEEEEeccCC-CCCCCCCccccCCCEEEEEEc-CCCCceEEEcC-CCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDY-STKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRS-SGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~-~~~~~~eLs~~~g~~l~vl~~-~~~~Ww~~~~~-~g~~G~vP~~yv~~~~   64 (101)
                      ....++|+|+|.+ +..+  +|+|++||+|.|+.+ .+++||.++.. +|+.|+||++||+.+.
T Consensus         5 ~~~~~~al~dy~a~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~   66 (67)
T 2kxc_A            5 KKQKVKTIFPHTAGSNKT--LLSFAQGDVITLLIPEEKDGWLYGEHDVSKARGWFPSSYTKLLE   66 (67)
T ss_dssp             CCCEEEESSCBCCSSCSS--BCCBCTTCEEEESSSSCBTTEEEEEESSSCCEEEEEGGGEEESC
T ss_pred             CCEEEEEeecCCCCCCCC--CCcCCCCCEEEEeECCCCCCcEEEEECCCCCEEEEehHHeEECC
Confidence            4457899999995 6666  999999999999986 67899999985 4899999999998753

>1aww_A ATK, AMGX1, BPK, bruton'S tyrosine kinase; X-linked agammaglobulinemia, XLA, BTK, SH3 domain, transferase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 1awx_A 1qly_A

Probab=99.69  E-value=7e-18  Score=95.32  Aligned_cols=59  Identities=22%  Similarity=0.600  Sum_probs=52.3

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ....++|+|+|.++..+  +|+|++||+|.|+.+.+++||.+++.+|+.|+||++||+.+.
T Consensus         7 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~   65 (67)
T 1aww_A            7 ELKKVVALYDYMPMNAN--DLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAE   65 (67)
T ss_dssp             CCCEEEBSSCCCCSSSS--SCCCCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCSC
T ss_pred             CCeEEEECccCCCCCCC--CccCCCCCEEEEEEccCCCcEEEEECCCCEEEEchHhEEEcC
Confidence            34578999999988777  999999999999999888999999778999999999998654

>2jxb_A T-cell surface glycoprotein CD3 epsilon chain, cytoplasmic protein NCK2; T-cell receptor, SH3 domain, immunology, SH2 domain; NMR {Homo sapiens}

Probab=99.68  E-value=6e-17  Score=95.79  Aligned_cols=56  Identities=29%  Similarity=0.684  Sum_probs=49.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      ...+++|+|+|++...+  +|+|++||+|.|+++ +++||.+++.+|+.|+||++||+.
T Consensus        30 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~g~~~~g~~G~~P~~yv~~   85 (86)
T 2jxb_A           30 EEVIVIAKWDYTAQQDQ--ELDIKKNERLWLLDD-SKTWWRVRNAANRTGYVPSNYVER   85 (86)
T ss_dssp             CCEEEEESSCCCCCSSS--BCCCCTTEEEEEEEC-CSSEEEEECTTSCEEEEEGGGBCC
T ss_pred             CceEEEECccCCCCCCC--EeccCCCCEEEEEec-CCCeEEEEECCCCEEEeehHHEEe
Confidence            34679999999988777  999999999999998 578999997789999999999964

>1ujy_A RHO guanine nucleotide exchange factor 6; structural genomics, SH3 domain, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.68  E-value=5.2e-17  Score=93.85  Aligned_cols=60  Identities=18%  Similarity=0.546  Sum_probs=53.5

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....+++|+|+|+++..+  +|+|++||+|.|+.+.+.+||.++. +|+.|+||++||+.+..
T Consensus         8 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   67 (76)
T 1ujy_A            8 SHQLIVKARFNFKQTNED--ELSVCKGDIIYVTRVEEGGWWEGTL-NGRTGWFPSNYVREIKS   67 (76)
T ss_dssp             CCCEEEECCSCBCCSSTT--SCCBCSSCCEEESSCCSSSCEEEEE-TTEEEEECTTTSEECCH
T ss_pred             CCCEEEEECccCCcCCCC--cccCCCCCEEEEEEecCCCEEEEEE-CCCEEEechHHEEECCc
Confidence            455689999999988777  9999999999999988889999997 89999999999998753

>2cuc_A SH3 domain containing ring finger 2; structural genomics, ring finger 2 containing protein, NPPSFA; NMR {Mus musculus}

Probab=99.68  E-value=6.8e-17  Score=91.83  Aligned_cols=60  Identities=17%  Similarity=0.314  Sum_probs=52.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|.++..+  +|+|++||+|.|+++.+++||.+++ .+|+.|+||++||+.+..
T Consensus         6 ~~~~~~al~~y~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   66 (70)
T 2cuc_A            6 SGNMFVALHTYSAHRPE--ELDLQKGEGIRVLGKYQDGWLKGLSLLTGRTGIFPSDYVIPVSG   66 (70)
T ss_dssp             SSCCEECCSCBCCCSTT--BCCBCTTCEEEEEEEEETTEEEEEETTTCCEEEEEGGGCEECCC
T ss_pred             CCcEEEECeeECcCCCC--cCCCCCCCEEEEEEecCCCeEEEEECCCCCEEEEchHHeEECcC
Confidence            34468999999988777  9999999999999998889999995 578999999999998754

>2d8h_A SH3YL1 protein; SH3 domain, hypothetical protein SH3YL1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.68  E-value=7.3e-17  Score=94.04  Aligned_cols=59  Identities=29%  Similarity=0.573  Sum_probs=52.3

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC--CCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~--~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+.+.+  ++||.++. +|+.|+||++||+.+..
T Consensus        16 ~~~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   76 (80)
T 2d8h_A           16 QPIEVTALYSFEGQQPG--DLNFQAGDRITVISKTDSHFDWWEGKL-RGQTGIFPANYVTMNSG   76 (80)
T ss_dssp             SCEEEECSSCEECSSTT--BCEECTTCEEEEEECCSCSSSEEEEEE-TTEEEEEEGGGCCBCCC
T ss_pred             CCEEEEECccCCcCCCC--eeeEcCCCEEEEeECcCCCCCeEEEEE-CCEEEEEchhHeEEcCC
Confidence            34578999999998777  99999999999999875  78999998 89999999999987654

>1gbq_A GRB2; complex (signal transduction/peptide), SH3 domain; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 1gbr_A 2gbq_A 3gbq_A 4gbq_A

Probab=99.68  E-value=6e-17  Score=93.23  Aligned_cols=58  Identities=21%  Similarity=0.532  Sum_probs=50.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ....++|+|+|+++..+  +|+|++||+|.|+++. +.+||.++. +|+.|+||++||+.+.
T Consensus         8 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~   66 (74)
T 1gbq_A            8 GSMEAIAKYDFKATADD--ELSFKRGDILKVLNEECDQNWYKAEL-NGKDGFIPKNYIEMKP   66 (74)
T ss_dssp             --CEEEESSCBCCSSTT--BCCBCTTCEEECCBCSSCSSEEEEEE-TTEEEEEEGGGEEEEC
T ss_pred             CCeEEEECccCCCCCCC--eeeEcCCCEEEEeEecCCCCEEEEEE-CCCEEEEehHhEEEcC
Confidence            45579999999998777  9999999999999987 668999996 8999999999998754

>2oi3_A Tyrosine-protein kinase HCK; human HCK, SH3, SRC-type tyrosine kinase, transferase; NMR {Homo sapiens} PDB: 2oj2_A 4hck_A 5hck_A

Probab=99.68  E-value=2.1e-16  Score=93.17  Aligned_cols=59  Identities=22%  Similarity=0.653  Sum_probs=52.3

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|.++..+  +|+|++||+|.|+++. ++||.++. .+|+.|+||++||+.+..
T Consensus        24 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~~   83 (86)
T 2oi3_A           24 EDIIVVALYDYEAIHHE--DLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVDS   83 (86)
T ss_dssp             TSEEEEESSCCCCSSSS--CCCCCTTCEEEEEEES-SSEEEEEETTTCCEEEEEGGGEEEGGG
T ss_pred             CCcEEEECccCCCCCCC--cCcCCCCCEEEEEEcC-CCeEEEEECCCCCEEEEehHHcEEccc
Confidence            34679999999988777  9999999999999998 58999998 578999999999998754

>1uff_A Intersectin 2; beta barrel, SH3 domain, endocytosis, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.68  E-value=1.1e-16  Score=95.90  Aligned_cols=59  Identities=22%  Similarity=0.365  Sum_probs=51.8

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      ..+++|||+|+++..+  ||+|++||+|.|+.+.  +++||.++. +|+.|+||++||+.+...
T Consensus         5 ~~~~~Alydy~a~~~~--eLsf~~Gd~i~v~~~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~~   65 (93)
T 1uff_A            5 SSGYRALYPFEARNHD--EMSFNSGDIIQVDEKTVGEPGWLYGSF-QGNFGWFPCNYVEKMPSS   65 (93)
T ss_dssp             CCCEEESSCBCCCSSS--CCCBCTTCEEEECSSCCCSSSEEEEEE-TTEEEEEETTTEEECCSS
T ss_pred             CEEEEECccCCCCCCC--CcCCCCCCEEEEeEccCCCCCEEEEEE-CCCEEEechHHeEEcCCc
Confidence            3468999999988777  9999999999999986  678999996 799999999999987653

>1x6b_A RHO guanine exchange factor (GEF) 16; SH3 domain, neuroblastoma, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.68  E-value=1.2e-16  Score=93.07  Aligned_cols=58  Identities=14%  Similarity=0.296  Sum_probs=51.8

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|+|+|+++..+  +|+|++||+|.|+++ +++||.++.. +|+.|+||++||+.+..
T Consensus        17 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~-~~gW~~g~~~~~g~~G~fP~~yv~~~~~   75 (79)
T 1x6b_A           17 LPQVEITKAFFAKQAD--EVTLQQADVVLVLQQ-EDGWLYGERLRDGETGWFPEDFARFISG   75 (79)
T ss_dssp             CCEEEESSCCCCCSSS--BCCCCTTEEEEEEEE-ETTEEEEEETTTCCEEEECGGGCEEEES
T ss_pred             CCEEEECeeECCCCcC--CcCCCCCCEEEEEEe-CCCEEEEEECCCCCEEEEchHHEEECCC
Confidence            3468999999988777  999999999999999 8899999985 78999999999998764

>1j3t_A Intersectin 2; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.68  E-value=1.4e-16  Score=91.64  Aligned_cols=58  Identities=14%  Similarity=0.409  Sum_probs=51.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|.+...+  +|+|++||+|.|++++ ++||.++. +|+.|+||++||+.+..
T Consensus         9 ~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~g~~-~g~~G~~P~~yv~~~~~   66 (74)
T 1j3t_A            9 ENLKAQALCSWTAKKDN--HLNFSKHDIITVLEQQ-ENWWFGEV-HGGRGWFPKSYVKIIPG   66 (74)
T ss_dssp             CCCEEEESSCBCCCSTT--BCCBCTTCEEEEEEEC-SSEEEEES-TTCCCEEEGGGEEECCC
T ss_pred             CCeEEEECCCCCCCCCC--ccCCCCCCEEEEEecC-CCEEEEEE-CCcEEEEchHHeEECCC
Confidence            34579999999988777  9999999999999985 68999997 78999999999998765

>2o2o_A SH3-domain kinase-binding protein 1; CIN85, protein binding; NMR {Homo sapiens}

Probab=99.67  E-value=2.8e-17  Score=98.53  Aligned_cols=62  Identities=15%  Similarity=0.402  Sum_probs=54.4

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccccCCC
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNG   69 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~~~   69 (101)
                      ...++|+|+|.++..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+...+..
T Consensus        18 ~~~~~Alydy~a~~~~--eLsf~~Gd~i~V~~~~~~gWw~g~~-~g~~G~fPsnyV~~~~~~~~~   79 (92)
T 2o2o_A           18 RRRCQVAFSYLPQNDD--ELELKVGDIIEVVGEVEEGWWEGVL-NGKTGMFPSNFIKELSGESDE   79 (92)
T ss_dssp             SCEEEECSCBCCCSSS--CCCBCSSCEEECCCGGGSSCBCCEE-TTEECCBCSSSEECCSSCSST
T ss_pred             CeEEEEccccCCCCCc--cccccCCCEEEEeEecCCCEEEEEE-CCeEEEeehHHEEECCCCCcc
Confidence            4478999999988777  9999999999999998889999997 899999999999987764433

>2ega_A SH3 and PX domain-containing protein 2A; SH3 domain, KIAA0418 protein, SH3MD1, SH3 multiple domains 1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.67  E-value=6.3e-17  Score=92.08  Aligned_cols=56  Identities=27%  Similarity=0.516  Sum_probs=50.9

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .++|+|+|+++..+  +|+|++||+|.|+.+.+++||.++. .|+.|+||++||+.+..
T Consensus        10 ~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   65 (70)
T 2ega_A           10 QYVVVSNYKKQENS--ELSLQAGEVVDVIEKNESGWWFVST-SEEQGWVPATYLEAQNS   65 (70)
T ss_dssp             CEECCSCCCCCSSS--SCCCCTTCBCEEEEECTTSEEEEEC-SSCEEEEEGGGCEESCC
T ss_pred             EEEECceECCCCCC--cccCCCCCEEEEEEccCCCeEEEEE-CCCEEEEehHHcEECCC
Confidence            58999999988777  9999999999999998889999997 68999999999998754

>2ke9_A Caskin-2; SH3 domain, ANK repeat, cytoplasm, phosphoprotein, protein binding; NMR {Homo sapiens}

Probab=99.67  E-value=1e-16  Score=94.42  Aligned_cols=58  Identities=17%  Similarity=0.389  Sum_probs=50.5

Q ss_pred             cEEEEEEecc-CCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC-----CcEEEEcCCceEecc
Q psy6758           5 DVTLKVLYDF-DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-----GKPFYVPASYVEVYK   64 (101)
Q Consensus         5 ~~~~~aly~f-~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~-----g~~G~vP~~yv~~~~   64 (101)
                      ...++|+|+| .+...+  +|+|++||+|.|+++.+++||.++..+     |+.|+||++||+.+.
T Consensus        18 ~~~~~Alydy~~a~~~~--eLsf~~GDiI~V~~~~~~gWw~G~~~~~~~~tg~~G~fPsnyV~~~~   81 (83)
T 2ke9_A           18 SLKVRALKDFWNLHDPT--ALNVRAGDVITVLEQHPDGRWKGHIHESQRGTDRIGYFPPGIVEVVS   81 (83)
T ss_dssp             CEEEEESSCBCCCSCTT--BCCBCTTCEEEESCSSCSSCEEEEECCSSTTSCCCEEECGGGEESSC
T ss_pred             CeEEEEccccCCCCCCC--cccccCCCEEEEEEecCCCeEEEEECCCCCCCCCEEEechHHEEECC
Confidence            4468999999 677666  999999999999999888999999753     689999999998754

>2kgt_A Tyrosine-protein kinase 6; SH3 domain, SRC kinase, PTK6, ATP-binding, cytoplasm, nucleotide-binding, nucleus, phosphoprotein, polymorphism; NMR {Homo sapiens}

Probab=99.67  E-value=6.7e-17  Score=92.36  Aligned_cols=58  Identities=21%  Similarity=0.474  Sum_probs=50.6

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC--CCcE---EEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKP---FYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~--~g~~---G~vP~~yv~~~~   64 (101)
                      ....++|+|+|.+...+  +|+|++||+|.| .+.+++||.++..  +|+.   |+||++||+.+.
T Consensus         9 ~~~~~~alydy~~~~~~--eLs~~~Gd~i~v-~~~~~~Ww~g~~~~~~g~~~~~G~~P~~yv~~~~   71 (72)
T 2kgt_A            9 LGPKYVGLWDFKSRTDE--ELSFRAGDVFHV-ARKEEQWWWATLLDEAGGAVAQGYVPHNYLAERE   71 (72)
T ss_dssp             CCCEEECCTTCBCSSTT--SCBCCTTCCEEE-EEECSSCEEEEEECTTSCEEEEEEECTTTSEEEC
T ss_pred             CCcEEEEcccCCCCCcC--CcCCCCCCEEEE-eeCCCCEEEEEEcCCCCCEeCCcEEcHhHEEEcc
Confidence            34579999999988777  999999999999 8878899999985  5888   999999998653

>2yup_A Vinexin; sorbin and SH3 domain-containing protein 3, SH3-containing adapter molecule 1, SCAM-1, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.67  E-value=1.3e-16  Score=95.03  Aligned_cols=58  Identities=28%  Similarity=0.496  Sum_probs=51.8

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|+|+|++...+  +|+|++||+|.|+.+.+++||.++.. .|+.|+||++||+.+..
T Consensus        18 ~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~~   76 (90)
T 2yup_A           18 GEAVAQYTFKGDLEV--ELSFRKGEHICLIRKVNENWYEGRITGTGRQGIFPASYVQVSRE   76 (90)
T ss_dssp             EEEEECSCCCCCSSS--BCCCCTTCEEEESSCCCSSEEEEECTTTCCEEEEEGGGEEEEEC
T ss_pred             eEEEEeecCCcCCcC--cCCCCCCCEEEEEEEcCCCeEEEEECCCCCEEEEehHHeEEcCC
Confidence            468999999988766  99999999999999988899999983 38999999999998765

>3i5r_A Phosphatidylinositol 3-kinase regulatory subunit alpha; SH3 domain, peptide complex, alternative splicing, disease mutation, HOST-virus interaction, phosphoprotein, polymorphism; 1.70A {Homo sapiens} SCOP: b.34.2.1 PDB: 3i5s_A 1pht_A 1pnj_A 2pni_A 1pks_A 1pkt_A

Probab=99.67  E-value=3.4e-17  Score=96.13  Aligned_cols=63  Identities=21%  Similarity=0.404  Sum_probs=52.2

Q ss_pred             CCCCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEc---------------CCCCceEEEcCC-CcEEEEcCCceEecc
Q psy6758           1 MELQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK---------------TNKDWWQVIRSS-GKPFYVPASYVEVYK   64 (101)
Q Consensus         1 ~~~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~---------------~~~~Ww~~~~~~-g~~G~vP~~yv~~~~   64 (101)
                      |......++|+|+|.++..+  +|+|++||+|.|+.+               .+++||.+++.. |+.|+||++||+.+.
T Consensus         1 ~s~~~~~~~Alydy~~~~~~--eLs~~~Gd~I~V~~~~~~~~~~~~~~e~~~~~~gW~~g~~~~~g~~G~fP~~yV~~~~   78 (83)
T 3i5r_A            1 MSAEGYQYRALYDYKKEREE--DIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIG   78 (83)
T ss_dssp             -CCEEEEEEECSCBCCCSTT--BCCBCTTCEEEEEHHHHHHHTCTTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEE
T ss_pred             CCCCCcEEEEccccCCCCCC--ccccCCCCEEEEeeccccccccccccccCCCCCccEEEEeCCCCCEEEEehHHEEECC
Confidence            45567789999999988777  999999999999964               234899998754 899999999999875


Q ss_pred             c
Q psy6758          65 K   65 (101)
Q Consensus        65 ~   65 (101)
                      .
T Consensus        79 ~   79 (83)
T 3i5r_A           79 R   79 (83)
T ss_dssp             E
T ss_pred             c
Confidence            4

>2csi_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1.2e-16  Score=92.34  Aligned_cols=59  Identities=15%  Similarity=0.310  Sum_probs=51.2

Q ss_pred             CcEEEEEEeccCCCC-------CCCCCccccCCCEEEEEEcCCC-CceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYST-------KDGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~-------~~~~eLs~~~g~~l~vl~~~~~-~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|++..       .+  +|+|++||+|.|+.+.+. +||.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~Al~dy~~~~~~~~~~~~~--eLsf~~Gd~i~v~~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~   72 (76)
T 2csi_A            6 SGRRMVALYDYDPRESSPNVDVEA--ELTFCTGDIITVFGEIDEDGFYYGEL-NGQKGLVPSNFLEEVSG   72 (76)
T ss_dssp             CSEEEECSSCCCTTTTSCSSSTTT--SCCCCTTCEEEEESSCCSSSEEEEEE-TTEEEEEEGGGCCBCCC
T ss_pred             CccEEEEcccCCCCCcccCCCCCC--cccCCCCCEEEEeEecCCCCeEEEEE-CCcEEEEehHHEEECCC
Confidence            345789999999886       55  999999999999998764 7999997 89999999999987754

>1wie_A RIM binding protein 2; beta barrel, KIAA0318 protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, protein binding; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.67  E-value=6.2e-17  Score=97.57  Aligned_cols=59  Identities=12%  Similarity=0.247  Sum_probs=51.6

Q ss_pred             cEEEEEEeccCCCC------CCCCCccccCCCEEEEE-EcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYST------KDGKYVRIQEGEKLFLI-KKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~------~~~~eLs~~~g~~l~vl-~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|||+|+++.      .+  +|+|++||+|.|+ ++.+++||.++..+|+.|+||++||+.+..
T Consensus        17 ~~~~~Alydy~~~~~~~~~~~~--eLsf~~Gd~i~v~~~~~~~gWw~g~~~~g~~G~~Psnyv~~~~~   82 (96)
T 1wie_A           17 VHLCVARYSYNPFDGPNENPEA--ELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQD   82 (96)
T ss_dssp             EEEEEESSCCCGGGSSCSCTTT--BCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCCS
T ss_pred             CcEEEECCccCCCcccCCCCCC--eeeECCCCEEEEeEecCCCCEEEEEECCCCEEEEchHHEEEcCC
Confidence            34689999999875      55  9999999999999 767889999997689999999999998754

>2kym_A BUD emergence protein 1; SH3 domain, BEM1P, SH3-CI, STE20P PRR, CDC42P-interacting, S signaling protein; NMR {Lodderomyces elongisporus}

Probab=99.67  E-value=1e-16  Score=100.28  Aligned_cols=60  Identities=25%  Similarity=0.455  Sum_probs=53.4

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc--CCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR--SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~--~~g~~G~vP~~yv~~~~~   65 (101)
                      +.++++|+|+|++..++  +|+|++||+|.|+.+.+++||.++.  ..|+.|+||++||+.+..
T Consensus         2 ~~~~~~Alydy~a~~~~--ELsf~~Gd~i~vl~~~~~~Ww~g~~~~~~g~~G~~P~nyv~~~~~   63 (120)
T 2kym_A            2 APLFAVTLYEFKAERDD--ELDVSPGENLSICAHYDYEWFIAKPINRLGGPGLVPVSYVRIIDL   63 (120)
T ss_dssp             CCCEEEECSCBCCCSTT--CCCBCTTCEEEEEEEETTTEEEEEESSSCSCCCCEEGGGEEEECS
T ss_pred             CCEEEEEcccCCCCCCC--ccCCCCCCEEEEEEecCCCEEEEEECCCCCCEEEEchHHEEEccC
Confidence            45679999999998777  9999999999999998889999986  567899999999998754

>2kxd_A 11-MER peptide, SH3 domain of spectrin alpha CHAI; alpha spectrin SH3 domain, SPC-S19P20S circular permutant, S protein; NMR {Synthetic}

Probab=99.67  E-value=8.5e-17  Score=92.32  Aligned_cols=54  Identities=31%  Similarity=0.568  Sum_probs=48.7

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ++|+|+|.+ ..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+.+
T Consensus         3 a~alydy~~-~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   56 (73)
T 2kxd_A            3 APPLPPYSA-GGR--EVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKLDS   56 (73)
T ss_dssp             CCCCCSSCC-CSC--CCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECCS
T ss_pred             EEEeeeeCC-CCC--EeeEcCCCEEEEEEecCCCEEEEEE-CCCEEEEehHHeEEcCC
Confidence            689999986 555  9999999999999998899999985 89999999999998765

>1i1j_A Melanoma derived growth regulatory protein; SH3 subdomain, hormone/growth factor complex; 1.39A {Homo sapiens} SCOP: b.34.2.1 PDB: 1k0x_A 1hjd_A

Probab=99.66  E-value=2.1e-16  Score=97.32  Aligned_cols=58  Identities=17%  Similarity=0.322  Sum_probs=49.5

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEc-C--CCCceEEEcCC-------CcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-T--NKDWWQVIRSS-------GKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~-~--~~~Ww~~~~~~-------g~~G~vP~~yv~~~~~   65 (101)
                      ..++|||+|.++..+  +|+|++||+|.|+.+ .  +++||.|+...       |+.|+||+|||+++..
T Consensus        23 ~~~~Alydy~a~~~~--ELsf~~GDiI~Vl~k~~~~g~dWW~G~~~~~~~~~~~g~~G~fPsnYV~~~~~   90 (108)
T 1i1j_A           23 SMAVALQDYMAPDCR--FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQT   90 (108)
T ss_dssp             EEEEESSCBCCSSTT--BCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEE
T ss_pred             eEEEECCccCCCCCC--ccccCCCCEEEEEEecCCCCCCEEEEEECCccccCCCCCEEEEchhHEEEccc
Confidence            468999999998777  999999999999998 2  33599999743       8899999999998764

>2yt6_A Adult MALE urinary bladder cDNA, riken FULL- length enriched library, clone:9530076O17...; SH3_1 domain; NMR {Mus musculus}

Probab=99.66  E-value=5.1e-16  Score=95.10  Aligned_cols=59  Identities=29%  Similarity=0.655  Sum_probs=53.0

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|+|+|.+...+  +|+|++||+|.|+++.+++||.+++ .+|+.|+||++||+.+..
T Consensus        27 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~~~~g~~G~~P~~yv~~~~~   86 (109)
T 2yt6_A           27 VTIFVALYDYEARTTE--DLSFKKGERFQIINNTEGDWWEARSIATGKSGYIPSNYVVPADS   86 (109)
T ss_dssp             CCEEEESSCCCCSSTT--SCCCCTTCEEEEEECSCTTCEEEEESSSCCEEEECTTTEEESSS
T ss_pred             CEEEEECccCCCCCCC--ccCCCCCCEEEEEEccCCCcEEEEECCCCCEEEechHHcEECCc
Confidence            3578999999988776  9999999999999998889999997 678999999999998754

>3reb_B Tyrosine-protein kinase HCK; HIV-1 NEF, SH3 domain binding, signaling, HCK SH3 domain, PR binding; 3.45A {Homo sapiens}

Probab=99.66  E-value=3e-16  Score=93.28  Aligned_cols=58  Identities=24%  Similarity=0.631  Sum_probs=51.1

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|.++..+  +|+|.+||+|.|+.++ ++||.++. .+|+.|+||++||+.+..
T Consensus         3 ~~~~~Alydy~~~~~~--eLs~~~Gd~i~v~~~~-~~Ww~g~~~~~g~~G~~P~~yv~~~~~   61 (90)
T 3reb_B            3 DIIVVALYDYVSWSPD--DLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVDS   61 (90)
T ss_dssp             CCEEEESSCBCCSSTT--BCCBCTTCEEEEEECS-SSEEEEEETTTCCEEEEEGGGEEEECC
T ss_pred             cEEEEECCccCcCCcC--cCCCCCCCEEEEEEeC-CCEEEEEECCCCCEEEEehhheEECCC
Confidence            4578999999988777  9999999999999984 68999998 578999999999998764

>2v1r_A Peroxisomal membrane protein PAS20; protein transport, translocation, transmembrane, peptide COM structural genomics, peroxisome; 2.1A {Saccharomyces cerevisiae} SCOP: b.34.2.1

Probab=99.65  E-value=3.2e-16  Score=91.16  Aligned_cols=58  Identities=29%  Similarity=0.672  Sum_probs=49.7

Q ss_pred             EEEEEEeccCCCCCCCC-CccccCCCEEEEEEcCCC-----CceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGK-YVRIQEGEKLFLIKKTNK-----DWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~-eLs~~~g~~l~vl~~~~~-----~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|+|+++  +.. +|+|++||+|.|+.+.+.     +||.++..+|+.|+||++||+.+..
T Consensus        15 ~~~~alydy~~~--~~~~eLs~~~Gd~i~v~~~~~~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~   78 (80)
T 2v1r_A           15 EFARALYDFVPE--NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIKR   78 (80)
T ss_dssp             EEEEESSCBCCS--STTTBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC--
T ss_pred             EEEEECccCCCC--CCCCEecCCCCCEEEEEECCCCCCCCCCcEEEEeCCCCeEEEEHHHeEEcCC
Confidence            468999999876  445 999999999999998765     8999998778999999999998653

>2csq_A RIM-BP2, RIM binding protein 2; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=5.1e-16  Score=93.65  Aligned_cols=60  Identities=12%  Similarity=0.227  Sum_probs=50.8

Q ss_pred             cEEEEEEeccCCC--------CCCCCCccccCCCEEEEEEc-CCCCceEEEcCCCcEEEEcCCceEeccccC
Q psy6758           5 DVTLKVLYDFDYS--------TKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRSSGKPFYVPASYVEVYKKLS   67 (101)
Q Consensus         5 ~~~~~aly~f~~~--------~~~~~eLs~~~g~~l~vl~~-~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~   67 (101)
                      ..+++|+|+|++.        ..+  +|+|++||+|.|+.+ ++++||.++. +|+.|+||++||+.+....
T Consensus        17 ~~~~~Alydy~~~~~~~~~~~~~~--eLsf~~Gd~i~vl~~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~~~   85 (97)
T 2csq_A           17 ARIFVALFDYDPLTMSPNPDAAEE--ELPFKEGQIIKVYGDKDADGFYRGET-CARLGLIPCNMVSEIQADD   85 (97)
T ss_dssp             CEEEECSSCBCTTTTSSCHHHHTT--BCCBCTTCEEEEEEEECTTCEEEEEE-TTEEEEEETTTSEECCCCS
T ss_pred             ceEEEEccccCCCcccccCCCCCC--ccCCCCCCEEEEEEecCCCCeEEEEE-CCcEEEEehHHeEECCCCc
Confidence            3468999999987        455  999999999999976 4567999998 7999999999999876533

>2e5k_A Suppressor of T-cell receptor signaling 1; SH3 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=5.5e-16  Score=92.87  Aligned_cols=59  Identities=19%  Similarity=0.410  Sum_probs=51.6

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC--C--CCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--N--KDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~--~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|.++..+  ||+|++||+|.|+.+.  +  ++||.+++ .+|+.|+||++||+.+..
T Consensus        16 ~~~~~Alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~~~gWw~g~~~~~g~~G~fP~~yv~~~~~   79 (94)
T 2e5k_A           16 HETLQVIYPYTPQNDD--ELELVPGDFIFMSPMEQTSTSEGWIYGTSLTTGCSGLLPENYITKADE   79 (94)
T ss_dssp             CEEEEECSCBCCSSSS--BCCBCTTCEEEECGGGCCSTTTTEEEEEESSSCCEEEEEGGGEEECCS
T ss_pred             CeEEEECCcCCCCCCC--CcCCCCCCEEEEEECcCCCCCCCcEEEEECCCCCEEEechHHeEEccc
Confidence            4578999999988777  9999999999999883  4  78999996 588999999999998753

>1wxu_A Peroxisomal biogenesis factor 13; SH3 domain, PEX13, protein-protein interaction, structural genomics; NMR {Mus musculus}

Probab=99.64  E-value=3.5e-16  Score=93.63  Aligned_cols=60  Identities=23%  Similarity=0.419  Sum_probs=51.2

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC----CCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN----KDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~----~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|||+|.+...+  +|+|++||+|.|+.+.+    .+||.++...++.|+||++||+.+..
T Consensus        16 ~~~~~~alydy~a~~~~--eLsf~~Gd~i~v~~~~~~~~~~gWw~g~~~~~~~G~~P~~yv~~~~~   79 (93)
T 1wxu_A           16 DHVVARAEYDFVAVSDE--EISFRAGDMLNLALKEQQPKVRGWLLASLDGQTTGLIPANYVKILGK   79 (93)
T ss_dssp             CBBCEEESSCBCCSSSS--BCCBCSSCBCEECCTTTSCSCSSCEEEESSSSSCEEECSTTEEECCC
T ss_pred             CCEEEEECccCCCCCCC--ccCcCCCCEEEEEECCCCCCCCCcEEEEeCCcCEEEEehHHEEEcCC
Confidence            45679999999988777  99999999999999876    58999986433499999999998754

>1jqq_A PEX13P, peroxisomal membrane protein PAS20, PAS20P, roxin-13; compact beta-barrel of five anti-parrallel beta-strands; 2.65A {Saccharomyces cerevisiae} SCOP: b.34.2.1 PDB: 1n5z_A

Probab=99.63  E-value=7.8e-16  Score=91.81  Aligned_cols=59  Identities=29%  Similarity=0.638  Sum_probs=51.3

Q ss_pred             cEEEEEEeccCCCCCCCC-CccccCCCEEEEEEcCCC-----CceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGK-YVRIQEGEKLFLIKKTNK-----DWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~-eLs~~~g~~l~vl~~~~~-----~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|.++  +.. +|+|++||+|.|+.+.+.     +||.++..+|+.|+||++||+.+..
T Consensus        14 ~~~~~alydy~~~--~~~~eLsf~~Gd~i~v~~~~~~~~~~~gWw~g~~~~g~~G~~P~~yv~~~~~   78 (92)
T 1jqq_A           14 LEFARALYDFVPE--NPEMEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEIIKR   78 (92)
T ss_dssp             CEEEEESSBBCCS--STTTBCCBCTTCEEEEEEEECTTSCEEEEEEEEETTSCEEEEEGGGEEECCC
T ss_pred             CEEEEECccCCCC--CCCCCcCCCCCCEEEEEECCCCCCCCCCCeEEEeCCCCEEEEehHHeEECCC
Confidence            3468999999876  445 999999999999998765     8999998778999999999998765

>2m0y_A Dedicator of cytokinesis protein 1; apoptosis; NMR {Mus musculus}

Probab=99.63  E-value=3.6e-16  Score=89.69  Aligned_cols=58  Identities=19%  Similarity=0.401  Sum_probs=50.5

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC--CCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~--~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|.++..+  +|+|++||+|.|+.++ ++||.++..  +|+.|+||++||+....
T Consensus        11 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~-~~W~~g~~~~~~g~~G~~P~~yv~~~~~   70 (74)
T 2m0y_A           11 EKYGVAFYNYDARGAD--ELSLQIGDTVHILETY-EGWYRGYTLRKKSKKGIFPASYIHLKEA   70 (74)
T ss_dssp             CSCEEECSEECCCSSS--BCCEETTEEEEEEEBS-SSCEEEEESSCSSCCEEECGGGEEECCC
T ss_pred             CeEEEEceeeCCCCcC--cccCCCCCEEEEEEcC-CCeEEEEECCCCCCEEEEehHHEEEecc
Confidence            3468999999988777  9999999999999986 789999984  58999999999987654

>3o5z_A Phosphatidylinositol 3-kinase regulatory subunit; SRC homology 3 domain, protein binding; 2.01A {Homo sapiens} SCOP: b.34.2.0 PDB: 2kt1_A

Probab=99.63  E-value=4.5e-16  Score=92.79  Aligned_cols=61  Identities=16%  Similarity=0.342  Sum_probs=50.5

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEc-------------C--CCCceEEEcC-CCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-------------T--NKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~-------------~--~~~Ww~~~~~-~g~~G~vP~~yv~~~~~   65 (101)
                      .....++|+|+|.++..+  ||+|++||+|.|+.+             .  +.+||.+++. +|+.|+||++||+.+..
T Consensus         9 ~~~~~~~Alydy~a~~~~--ELsf~~GD~I~V~~~~~~~l~~~~~~~~~~~~~gW~~G~~~~~g~~G~fP~nyVe~i~~   85 (90)
T 3o5z_A            9 PEGFQYRALYPFRRERPE--DLELLPGDVLVVSRAALQALGVAEGGERCPQSVGWMPGLNERTRQRGDFPGTYVEFLGP   85 (90)
T ss_dssp             CSEEEEEECSCBCCCSTT--BCCBCTTCEEEEEHHHHHHTTCCTTGGGCHHHHCEEEEEETTTCCEEEEEGGGEEEEEE
T ss_pred             CCCcEEEEeeeECCCCCC--ccCCcCCCEEEEEeccccccccccccccCCCCCCceEEEeCCCCCEEEeehHHEEEecc
Confidence            445679999999998777  999999999999853             2  2379999874 48999999999998754

>1awj_A ITK; transferase, regulatory intramolecular complex, kinase; NMR {Mus musculus} SCOP: b.34.2.1 PDB: 2rn8_A 2rna_A 2k79_A 2k7a_A

Probab=99.63  E-value=7.7e-18  Score=97.64  Aligned_cols=55  Identities=24%  Similarity=0.585  Sum_probs=50.0

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      .+++|+|+|++...+  +|+|++||+|.|+++.+++||.+++.+|+.|+||++||+.
T Consensus        21 ~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~   75 (77)
T 1awj_A           21 TLVIALYDYQTNDPQ--ELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE   75 (77)
T ss_dssp             SCCCCCCCBCCCCTT--SCCBCSSSCCSCCCTTSSSBCCCCCSSSCCCCCBSTTCCC
T ss_pred             eEEEECccCCCCCcC--CcCCCCCCEEEEEEecCCCCEEEEECCCCEEEEehHHEEE
Confidence            468999999988777  9999999999999998889999987788999999999975

>1udl_A Intersectin 2, KIAA1256; beta barrel, SH3 domain, riken structural genomics/proteomics initiative, RSGI, structural genomics; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.62  E-value=3.8e-16  Score=94.25  Aligned_cols=58  Identities=22%  Similarity=0.516  Sum_probs=51.9

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|+|+|+++..+  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus        34 ~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   91 (98)
T 1udl_A           34 VCQVIAMYDYAANNED--ELSFSKGQLINVMNKDDPDWWQGEI-NGVTGLFPSNYVKMTTD   91 (98)
T ss_dssp             SEEEEESSCCCCSSTT--SCCCCTTCEEEECBCCSSSEEBCBS-SSCBCCEETTSEEECCC
T ss_pred             ceEEEECCCCCCCCCC--ccCCcCCCEEEEEEecCCCEEEEEE-CCcEEEEehHHeEEcCC
Confidence            4568999999988777  9999999999999998889999984 88999999999998754

>2rqv_A BUD emergence protein 1; BEM1P, SH3, CDC42P, cytoplasm, cytoskeleton, SH3 domain, SIG protein; NMR {Saccharomyces cerevisiae} PDB: 2rqw_A

Probab=99.62  E-value=1.2e-16  Score=98.45  Aligned_cols=59  Identities=29%  Similarity=0.498  Sum_probs=50.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCC---cEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSG---KPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g---~~G~vP~~yv~~~~~   65 (101)
                      +..+++|+|||+++.++  ||+|++||+|.|+.+.+++||.++. .|   ..|+||+|||+.+..
T Consensus         4 ~~~~~~Alydy~a~~~~--ELsf~~Gd~i~vl~~~~~~Ww~g~~-~g~~g~~G~fPsnYV~~~~~   65 (108)
T 2rqv_A            4 GSLYAIVLYDFKAEKAD--ELTTYVGENLFICAHHNCEWFIAKP-IGRLGGPGLVPVGFVSIIDI   65 (108)
T ss_dssp             SCCCEEESSCCCCCSSS--BCCCCSSEEECCCCEETTTEEEECC-SSSSCCCEEEESTTCBCCCS
T ss_pred             CCeEEEECCCcCCCCCC--cCCcCCCCEEEEeEecCCCEEEEEE-CCccCCeeEeecceEEEecC
Confidence            34578999999998777  9999999999999988889999986 44   449999999987654

>2kbt_A Chimera of proto-oncogene VAV, linker, immunoglobulin G-binding protein G; sortase, protein ligation, intein, inset, solubility enhancement; NMR {Mus musculus}

Probab=99.60  E-value=3.2e-15  Score=95.94  Aligned_cols=57  Identities=26%  Similarity=0.496  Sum_probs=51.1

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|+|+|++...+  +|+|++||+|.|+.+. +++||.++. +|+.|+||++||+.+..
T Consensus         6 ~~~~Alydy~a~~~~--ELsf~~Gd~i~Vl~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~~   63 (142)
T 2kbt_A            6 GTAKARYDFCARDRS--ELSLKEGDIIKILNKKGQQGWWRGEI-YGRIGWFPSNYVEEDYS   63 (142)
T ss_dssp             CEEEESSCCCCSSSS--BCCCCTTCEEEEEECCCSSSEEEEEE-TTEEEEEETTSEEESSC
T ss_pred             eEEEECCccCCCCCC--cCCCCCCCEEEEEEecCCCCeEEEEE-CCeeEEechHHEEEccc
Confidence            368999999988777  9999999999999984 789999997 89999999999998754

>1hsq_A Phospholipase C-gamma (SH3 domain); phosphoric diester hydrolase; NMR {Homo sapiens} SCOP: b.34.2.1 PDB: 2hsp_A

Probab=99.60  E-value=3e-17  Score=93.71  Aligned_cols=60  Identities=22%  Similarity=0.452  Sum_probs=51.4

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEE-EEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPF-YVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G-~vP~~yv~~~~~   65 (101)
                      ....+++|+|+|+++..+  +|+|++||+|.|+.+.+++||.++. +++.| +||++||+.+..
T Consensus         4 ~~~~~~~al~dy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~gG~~P~~yv~~~~~   64 (71)
T 1hsq_A            4 TFKCAVKALFDYKAQRED--ELTFIKSAIIQNVEKQEGGWWRGDY-GGKKQLWFPSNYVEEMVN   64 (71)
T ss_dssp             CSSSCCCCSSCCCCSSSS--SCCCCTTCCCBSCCCBTTTEECCBC-SSSCSCCEETTTCCSCSC
T ss_pred             CCCeEEEECCCCCcCCCC--ccCCCCCCEEEEEEecCCCEEEEEE-CCeEEeEEChHHcEECCC
Confidence            345578999999988777  9999999999999998889999987 66665 999999987654

>3qwx_X Cell death abnormality protein 2; cell engulfment, signaling protein; 2.01A {Caenorhabditis elegans}

Probab=99.60  E-value=2.9e-15  Score=98.49  Aligned_cols=56  Identities=29%  Similarity=0.569  Sum_probs=51.0

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      ...++|+|+|++..++  +|+|++||+|.|+++.+++||.+++.+|+.|+||+|||+.
T Consensus       118 ~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~nyv~~  173 (174)
T 3qwx_X          118 IEVVVGTFKFTGERET--DLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQI  173 (174)
T ss_dssp             SEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEECTTCCEEEEEGGGEEE
T ss_pred             ccEEEEecCcccCCCC--ccccccCCEEEEEEccCCCeEEEEECCCCEEEEChHHEEe
Confidence            3478999999998777  9999999999999998899999997689999999999975

>1bb9_A Amphiphysin 2; transferase, SH3 domain; 2.20A {Rattus norvegicus} SCOP: b.34.2.1 PDB: 1muz_A 1mv0_B

Probab=99.58  E-value=1e-15  Score=95.14  Aligned_cols=56  Identities=13%  Similarity=0.349  Sum_probs=49.0

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEE-----cCCCCceEEEcC---------CCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIK-----KTNKDWWQVIRS---------SGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~-----~~~~~Ww~~~~~---------~g~~G~vP~~yv~~~   63 (101)
                      .+++|||+|+++..+  +|+|++||+|.|+.     ..+++||.+++.         +|+.|+||++||+.+
T Consensus        45 ~~~~Alydy~a~~~d--ELsf~~GDiI~Vl~~~~~~~~~~gWw~G~~~~t~~~~~~~~g~~G~fPsnyV~~l  114 (115)
T 1bb9_A           45 FKVQAQHDYTATDTD--ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV  114 (115)
T ss_dssp             EEEEESSCBCCSSTT--BCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             eEEEECCccCCCCCC--ccCcCCCCEEEEeeccCCcccCCCeEEEEeCCCcccccccCCCEEEechHHEEEC
Confidence            468999999998777  99999999999999     677899999863         268899999999875

>2rqr_A CED-12 homolog, engulfment and cell motility protein 1, linker, D of cytokinesis protein 2; KIAA0209, KIAA0281, apoptosis, membrane, phagocytosis; NMR {Homo sapiens}

Probab=99.58  E-value=2.9e-15  Score=93.50  Aligned_cols=58  Identities=16%  Similarity=0.273  Sum_probs=50.4

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC--CCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~--~g~~G~vP~~yv~~~~   64 (101)
                      ...+++|+|+|+++..+  ||+|++||+|.|++++ ++||.++..  +|+.|+||++||+.+.
T Consensus        58 ~~~~~~Alydy~a~~~~--eLsf~~Gd~i~vl~~~-~gWw~g~~~~~~g~~G~fP~nyV~~~~  117 (119)
T 2rqr_A           58 KERHGVAIYNFQGSGAP--QLSLQIGDVVRIQETC-GDWYRGYLIKHKMLQGIFPKSFIHIKE  117 (119)
T ss_dssp             CCEEEEBCSCBCCCSTT--BCCBCTTCEEEEEEEE-TTEEEEEESSCTTCEEEEEGGGBCCCC
T ss_pred             CceEEEEccccCCCCCC--cccCcCCCEEEEEEcC-CCEEEEEECCCCCCEEEeChhHEEEec
Confidence            34579999999988777  9999999999999986 589999974  5799999999998653

>1gcq_C VAV proto-oncogene; SH3 domain, protein-protein complex, GRB2,VAV, signaling protein/signaling protein complex; 1.68A {Mus musculus} SCOP: b.34.2.1 PDB: 1gcp_A

Probab=99.57  E-value=1.2e-14  Score=82.49  Aligned_cols=58  Identities=19%  Similarity=0.480  Sum_probs=44.5

Q ss_pred             EEEEEeccCCCCCC----CCCccccCCCEEEEEEc-CCCCceEEEc-CCCcEEEEcCCceEecc
Q psy6758           7 TLKVLYDFDYSTKD----GKYVRIQEGEKLFLIKK-TNKDWWQVIR-SSGKPFYVPASYVEVYK   64 (101)
Q Consensus         7 ~~~aly~f~~~~~~----~~eLs~~~g~~l~vl~~-~~~~Ww~~~~-~~g~~G~vP~~yv~~~~   64 (101)
                      .++|++.|++....    ..+|+|++||+|.|+++ .+.+||.+++ .+|+.|+||++||+..+
T Consensus         6 ~~~~~~~y~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~~Ww~g~~~~~g~~G~fP~~yv~~~~   69 (70)
T 1gcq_C            6 KMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYV   69 (70)
T ss_dssp             EEEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEECC
T ss_pred             cceEEEEEEecCCCCCCCCCcCCcCCCCEEEEEeCCCCCCCeEEEeCCCCCEeEeehHHeEECC
Confidence            34555555443332    23999999999999999 5789999984 57899999999998753

>1mv3_A MYC box dependent interacting protein 1; tumor suppressor, endocytosis/exocytosis complex; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.55  E-value=4e-15  Score=101.07  Aligned_cols=56  Identities=13%  Similarity=0.349  Sum_probs=49.6

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEE-----cCCCCceEEEcC---------CCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIK-----KTNKDWWQVIRS---------SGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~-----~~~~~Ww~~~~~---------~g~~G~vP~~yv~~~   63 (101)
                      .+++|||+|.++..+  +|+|++||+|.|+.     ..+.+||.|++.         +|+.||||+|||+.+
T Consensus       143 ~~~rALYdY~a~~~d--ELSf~~GDiI~Vl~~~~~~~~ddgWw~G~~~~t~~~~~d~~G~~G~FPsnYVe~l  212 (213)
T 1mv3_A          143 FKVQAQHDYTATDTD--ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKKLEKCRGVFPENFTERV  212 (213)
T ss_dssp             EEEEESSCBCCCSTT--CCCBCSSCEEEECCCSCGGGSCTTEEEEEEHHHHHTGGGGGGTCEEEESTTEEEE
T ss_pred             eEEEECCCcCCCCCC--cCCcCCCCEEEEeecCCCCccCCCeeEEEeCCcccccccCCCCEEEecHHHeEEC
Confidence            368999999998777  99999999999999     677899999963         488999999999865

>1k1z_A VAV; SH3, proto-oncogene, signaling protein; NMR {Mus musculus} SCOP: b.34.2.1

Probab=99.55  E-value=2.2e-14  Score=83.04  Aligned_cols=57  Identities=19%  Similarity=0.461  Sum_probs=44.3

Q ss_pred             EEEEeccCCCC-CCCCCccccCCCEEEEEEcC-CCCceEEEc-CCCcEEEEcCCceEecc
Q psy6758           8 LKVLYDFDYST-KDGKYVRIQEGEKLFLIKKT-NKDWWQVIR-SSGKPFYVPASYVEVYK   64 (101)
Q Consensus         8 ~~aly~f~~~~-~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~-~~g~~G~vP~~yv~~~~   64 (101)
                      +.++|+|.+.. .+..+|+|++||+|.|+++. +++||.+++ .+|+.|+||++||+..+
T Consensus        18 ~~a~~~~~~~~~~~~~eLsf~~Gd~i~v~~~~~~~gWw~g~~~~~g~~G~fP~nyV~~~~   77 (78)
T 1k1z_A           18 FQEYYGIPPPPGAFGGFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPYV   77 (78)
T ss_dssp             CSCBSSCSCCSSSSCCCCCBCTTCEEEEEECCSSCSCEEEEETTTTEEEEECSTTEEESC
T ss_pred             EEECCCCCCCCCCCCCccCCCCCCEEEEEEcCCCCCeEEEEECCCCCEEEEehHHeEECC
Confidence            34555565431 11249999999999999995 889999997 57899999999998753

>3jv3_A Intersectin-1; SH3 domain, DH domain, guanine nucleotide exchange factor, autoinhibition, domain-swapped, cell junction, cell project endocytosis; 2.40A {Mus musculus} PDB: 3gf9_A

Probab=99.55  E-value=1.4e-14  Score=100.75  Aligned_cols=58  Identities=22%  Similarity=0.520  Sum_probs=52.7

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|+|||.+..++  +|+|++||++.|+++.+++||.|+. +|+.|+||++||+.+..
T Consensus         2 ~~~~~a~~~~~~~~~~--el~~~~gd~i~v~~~~~~~w~~~~~-~g~~G~~P~~~v~~~~~   59 (283)
T 3jv3_A            2 SCQVIGMYDYTAQNDD--ELAFSKGQIINVLNKEDPDWWKGEV-SGQVGLFPSNYVKLTTD   59 (283)
T ss_dssp             CEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSTTEEEEEE-TTEEEEEEGGGEEEGGG
T ss_pred             CeEEEEccccCCCCCC--cCCCCCCCEEEEEecCCCCEEEEEE-CCCCCcCCCccccccCc
Confidence            5679999999988777  9999999999999999889999986 89999999999998664

>4d8k_A Tyrosine-protein kinase LCK; protein kinases, SH2 domain, SH3 domain, structural genomics center for structural genomics, JCSG; 2.36A {Homo sapiens} PDB: 1lck_A* 1x27_A*

Probab=99.53  E-value=2.6e-14  Score=94.00  Aligned_cols=58  Identities=19%  Similarity=0.512  Sum_probs=50.6

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|||+++.++  ||+|++||+|.|+++ +++||+++. .+|++|+||++|++....
T Consensus        12 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~-~~~Ww~~~~~~~g~~G~vP~~yv~~~~~   70 (175)
T 4d8k_A           12 DNLVIALHSYEPSHDG--DLGFEKGEQLRILEQ-SGEWWKAQSLTTGQEGFIPFNFVAKANS   70 (175)
T ss_dssp             -CEEEESSCBCCCSSS--BCCBCTTCEEEEEEC-CSSEEEEEETTTCCEEEEEGGGEEETTC
T ss_pred             CcEEEEccCcCCcCCc--ccccccCCEEEEEcc-CCCEEEEEECCCCceeeecccccccccc
Confidence            3479999999998777  999999999999999 578999998 478999999999997543

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.53  E-value=2.1e-14  Score=96.82  Aligned_cols=59  Identities=20%  Similarity=0.527  Sum_probs=52.9

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|+|+++..+  +|+|++||+|.|+.+.+++||.++. +|+.|+||++||+.+..
T Consensus       157 ~~~~~~al~~y~~~~~~--eL~~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~~~~  215 (217)
T 1gri_A          157 QPTYVQALFDFDPQEDG--ELGFRRGDFIHVMDNSDPNWWKGAC-HGQTGMFPRNYVTPVNR  215 (217)
T ss_dssp             CCCEEEESSCCCCSSTT--BCCCCTTCEEEEEECCSSSEEEEEC-SSCEEEEEGGGEEEECC
T ss_pred             CceEEEecCCccCCCCC--cCCCCCCCEEEEEEeCCCCeEEEEE-CCeEEEEeHHHeEECCC
Confidence            34579999999998777  9999999999999998889999997 89999999999998653

>2dvj_A V-CRK sarcoma virus CT10 oncogene homolog, isoform A; SH3, SH2, signal transduction, adapter molecule, signaling protein; HET: PTR; NMR {Homo sapiens} PDB: 2eyy_A 2eyv_A 2eyw_A

Probab=99.52  E-value=2.4e-15  Score=102.94  Aligned_cols=62  Identities=27%  Similarity=0.587  Sum_probs=54.4

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccccCCC
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSNG   69 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~~~~   69 (101)
                      ..++|+|||++...+  ||+|++||+|.|+++.+++||.+++.+|+.|+||++||+.+......
T Consensus       137 ~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~~~~~  198 (230)
T 2dvj_A          137 EYVRALFDFNGNDEE--DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRPASAS  198 (230)
T ss_dssp             CCCBCCSCCCCSSSS--SCCCCSSCBCCCCBCSCSSEEEEECTTSCEEEEEGGGSCCCCSSCCC
T ss_pred             eeEEEeeeecCCCCC--CccCcCCCEEEEEEccCCCcEEEEeCCCCEEEEehHHeEEcCCCCcC
Confidence            358999999988777  99999999999999988999999977899999999999987654433

>1u3o_A Huntingtin-associated protein-interacting protein; SH3, CIS-proline,, signaling protein; NMR {Rattus norvegicus}

Probab=99.51  E-value=1.3e-14  Score=84.85  Aligned_cols=53  Identities=25%  Similarity=0.334  Sum_probs=45.7

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcC--CCCceEEEcCC---CcEEEEcCCceE
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT--NKDWWQVIRSS---GKPFYVPASYVE   61 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~--~~~Ww~~~~~~---g~~G~vP~~yv~   61 (101)
                      .+.|+|||.+...+  ||+|++|+.+.|+++.  +++||++++..   +++||||+|||.
T Consensus        19 ~~valydF~Ar~~~--ELS~~kGd~vevle~~~~~peW~lvr~~~~~~~qeGlVPsnyl~   76 (82)
T 1u3o_A           19 LTVVLQDFSAAHSS--ELSIQVGQTVELLERPSERPGWCLVRTTERSPPQEGLVPSSTLC   76 (82)
T ss_dssp             EEECSSCBCCCSTT--CCCBCTTCEEEESSCTTSSTTEEEEEESSSSSCEEEEEEGGGSC
T ss_pred             EEEEEeeecCCCCC--eeeEcCCCEEEEEecCCCCCCEEEEEECCCCCCcEeeccccEEe
Confidence            47899999998777  9999999999999986  47899999733   378999999993

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.51  E-value=4.7e-14  Score=94.22  Aligned_cols=58  Identities=21%  Similarity=0.397  Sum_probs=52.2

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|+|+|.+...+  +|+|.+||+|.|+.+.+++||.++. +|+.||||++||+.+..
T Consensus        81 ~~~~~al~dy~a~~~~--eLs~~~Gd~i~vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~  138 (193)
T 1ng2_A           81 GEPYVAIKAYTAVEGD--EVSLLEGEAVEVIHKLLDGWWVIRK-DDVTGYFPSMYLQKSGQ  138 (193)
T ss_dssp             CEEEEESSCBCCCSTT--BCCBCTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEETTS
T ss_pred             ceeeeeccccCCCCCC--cccccCCCEEEEEEecCCCeEEEEE-CCCEEEEehHHeEECCC
Confidence            3568999999998777  9999999999999998889999996 89999999999998654

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.50  E-value=7.5e-14  Score=98.88  Aligned_cols=59  Identities=27%  Similarity=0.608  Sum_probs=53.4

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|.++..+  +|+|++||+|.|+++.+++||.+++.+|+.|+||++||+.+..
T Consensus       134 ~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~~~  192 (304)
T 2eyz_A          134 AEYVRALFDFNGNDEE--DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKYRP  192 (304)
T ss_dssp             CCEEEECSCCCCSCSS--SCCCCTTCEEEEEECCSSSEEEEECTTSCEEEEESTTEEECCC
T ss_pred             ceeEEEEeeecCCCCC--cCcccCCCEEEEEEecCCCcEEEEeCCCceeccchhccccccC
Confidence            4578999999988777  9999999999999998899999997789999999999998754

>1k9a_A Carboxyl-terminal SRC kinase; COOH-terminal SRC kinase, CSK, SFK, signal transduction, SH2, SH3, SRC homology, tyrosine kinase; 2.50A {Rattus norvegicus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1jeg_A

Probab=99.47  E-value=1.1e-13  Score=101.52  Aligned_cols=60  Identities=17%  Similarity=0.395  Sum_probs=52.8

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEc-CCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK-TNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~-~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|+|||+++.++  ||+|++||++.|+++ .+++||.++..+|+.|+||+|||++...
T Consensus        10 ~~~~~~aly~~~~~~~~--el~~~~gd~i~v~~~~~~~~ww~~~~~~g~~G~~P~~yv~~~~~   70 (450)
T 1k9a_A           10 SGTECIAKYNFHGTAEQ--DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG   70 (450)
T ss_dssp             TTCEEEESSCBCCSSSS--BCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCC
T ss_pred             CCCEEEECCCcCccCCC--cCCCCCCCEEEEeeccCCCCceEEEECCCceeeechhccccccc
Confidence            45579999999998777  999999999999998 5779999998669999999999997554

>2pz1_A RHO guanine nucleotide exchange factor 4; helical bundle, beta barrel, beta sandwich, signaling protei; 2.25A {Homo sapiens} PDB: 2dx1_A 3nmz_D 3nmx_D

Probab=99.46  E-value=2.4e-13  Score=100.55  Aligned_cols=60  Identities=20%  Similarity=0.371  Sum_probs=53.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      ...+++|+|||.+..++  +|+|++||+|.|+++.+++||.|+. +|+.|+||++||+.+...
T Consensus        29 ~~~~~~al~~~~~~~~~--eL~~~~gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~~   88 (466)
T 2pz1_A           29 SVVCAEALWDHVTMDDQ--ELGFKAGDVIEVMDATNREWWWGRV-ADGEGWFPASFVRLRVNQ   88 (466)
T ss_dssp             CCEEEEESSCBCCCCTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECSCC
T ss_pred             CccEEEEccccCCCCCC--cCCCCCCCEEEEEEecCCCEEEEEE-CCcEEEEehhHeeeccCc
Confidence            34679999999988777  9999999999999998899999997 789999999999987653

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=99.45  E-value=1.6e-13  Score=98.59  Aligned_cols=58  Identities=28%  Similarity=0.523  Sum_probs=52.3

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|+|+|+++..+  +|+|++||+|.|+++.+++||.|+. +|+.|+||++||+.+..
T Consensus       174 ~~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~  231 (341)
T 2dyb_A          174 APRAEALFDFTGNSKL--ELNFKAGDVIFLLSRINKDWLEGTV-RGATGIFPLSFVKILKD  231 (341)
T ss_dssp             CCEEEESSCBCCSSSS--BCCBCTTCEEEEEEECSSSEEEEEE-TTEEEEEEGGGEEEEEC
T ss_pred             CcEEEEEEeeCCCCCC--cCCccCCCEEEEEEecCCCEEEEEE-CCcEEEechHHeEEcCC
Confidence            3468999999998777  9999999999999998899999995 89999999999998754

>3a98_A DOCK2, dedicator of cytokinesis protein 2; protein-protein complex, DOCK2, ELMO1, SH3 domain, PH domain bundle, proline-rich sequence, cytoskeleton; 2.10A {Homo sapiens}

Probab=99.44  E-value=9.5e-14  Score=92.33  Aligned_cols=58  Identities=16%  Similarity=0.264  Sum_probs=50.2

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC--CCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~--~g~~G~vP~~yv~~~~~   65 (101)
                      ..+++|+|+|.++.++  +|+|++||+|.|+++.+ +||.|+..  +|+.|+||++||+....
T Consensus        17 ~~~~~Alydf~~~~~~--eLs~~~Gd~i~v~~~~~-~W~~g~~~~~~g~~G~fP~nyV~~~~~   76 (184)
T 3a98_A           17 ERHGVAIYNFQGSGAP--QLSLQIGDVVRIQETCG-DWYRGYLIKHKMLQGIFPKSFIHIKEV   76 (184)
T ss_dssp             CCEEEESSCBCCSSTT--BCCBCTTCEEEEEEEET-TEEEEEETTEEEEEEEEEGGGEEEECC
T ss_pred             ceEEEEeeeeCCCCCC--CCCcCCCCEEEEEecCC-CEEEEEEecCCCceEEECcceEEEecc
Confidence            4579999999998777  99999999999999876 59999873  46899999999998654

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.43  E-value=2.5e-13  Score=96.24  Aligned_cols=57  Identities=28%  Similarity=0.549  Sum_probs=51.3

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ...++|+|+|+++..+  +|+|++||+|.|+++.+++||++++.+|+.|+||++||+..
T Consensus       147 ~~~~~al~dy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~g~~G~~P~~yv~~~  203 (308)
T 3qwy_A          147 IEVVVGTFKFTGERET--DLPFEQGERLEILSKTNQDWWEARNALGTTGLVPANYVQIQ  203 (308)
T ss_dssp             CEEEEESSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEECTTSCEEEEEGGGEEEC
T ss_pred             ceeEEEeceEcCCCCC--cCcCCCCCEEEEEEcCCCCeEEEEeCCCCeeEecccccccc
Confidence            3478999999988777  99999999999999988999999977889999999999943

>1ng2_A Neutrophil cytosolic factor 1; P47PHOX, autoinhibited, SH3 domain, NADPH oxidase, oxidoredu activator; 1.70A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 PDB: 1uec_A 1ov3_A 1wlp_B

Probab=99.43  E-value=5.1e-14  Score=94.05  Aligned_cols=57  Identities=19%  Similarity=0.494  Sum_probs=51.1

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|+|+|.+...+  +|+|.+||+|.|+.+.+++||.++. +|+.||||++||+.+..
T Consensus        12 ~~~~al~dy~~~~~~--eLs~~~Gd~i~vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~   68 (193)
T 1ng2_A           12 QTYRAIADYEKTSGS--EMALSTGDVVEVVEKSESGWWFCQM-KAKRGWIPASFLEPLDS   68 (193)
T ss_dssp             EEEECSSCBCCSSTT--CCCBCTTCEEEEEECCTTSCCEEEE-CCCCCCCCGGGCCCSSC
T ss_pred             cEEEEcCCcCCCCCC--cCCCCCCCEEEEEEecCCCeEEEEE-CCeeeEechheEEeecc
Confidence            368999999988777  9999999999999998889999994 88999999999987654

>1fmk_A C-SRC, P60-SRC, tyrosine-protein kinase SRC; tyrosine kinase, phosphorylation, SH2, SH3, phosphotyrosine, proto-oncogene, phosphotransferase; HET: PTR; 1.50A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1y57_A* 2src_A* 1ksw_A* 2ptk_A* 1yol_A* 2oiq_A* 3d7t_B* 3dqx_A* 3el7_A* 3el8_A* 3en4_A* 3en5_A* 3en6_A* 3en7_A* 3f6x_A* 3g6g_A* 3uqf_A* 3uqg_A* 4agw_A* 3oez_A* ...

Probab=99.42  E-value=2.2e-13  Score=100.06  Aligned_cols=57  Identities=30%  Similarity=0.676  Sum_probs=51.5

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~~~   65 (101)
                      .++|+|||+++.++  ||+|++||++.|+++.+++||.++.. +|+.|+||+|||+....
T Consensus         4 ~~~al~~~~~~~~~--el~~~~gd~~~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~~   61 (452)
T 1fmk_A            4 TFVALYDYESRTET--DLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS   61 (452)
T ss_dssp             EEEESSCBCCCSSS--BCCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETTS
T ss_pred             EEEECCccCCCCCC--CCCccCCCEEEEeccCCCCceEEEEcCCCcccccCccccccccc
Confidence            58999999998777  99999999999999988999999985 68999999999997643

>2h8h_A Proto-oncogene tyrosine-protein kinase SRC; SRC kinase, transferase; HET: PTR H8H; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7

Probab=99.42  E-value=3.1e-13  Score=101.32  Aligned_cols=57  Identities=30%  Similarity=0.676  Sum_probs=51.4

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~~~   65 (101)
                      .++|+|||+++..+  ||+|++||+|.|+++.+++||.++.. +|+.|+||+|||+....
T Consensus        87 ~~~alyd~~~~~~~--el~~~~gd~i~v~~~~~~~ww~~~~~~~g~~G~~P~~yv~~~~~  144 (535)
T 2h8h_A           87 TFVALYDYESRTET--DLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS  144 (535)
T ss_dssp             CEEESSCBCCCSSS--BCCBCTTCEEEEEECSSSSEEEEEETTTCCEEEEEGGGEEETTS
T ss_pred             EEEEccccCCcCCC--cCCcCCCCEEEEEEecCCCceEEEECCCCcceEecchhhccccc
Confidence            58999999998777  99999999999999988999999985 68999999999997543

>2eyz_A V-CRK sarcoma virus CT10 oncogene homolog isoform A; SH2, SH3, signaling protein; NMR {Homo sapiens} PDB: 2l3s_A 2l3p_A 2l3q_A 2ggr_A

Probab=99.39  E-value=1e-13  Score=98.17  Aligned_cols=59  Identities=17%  Similarity=0.173  Sum_probs=50.3

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|+|.+...+..||+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus       238 ~~~~al~d~~~~a~~~~eL~~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~~  296 (304)
T 2eyz_A          238 IYARVIQKRVPNAYDKTALALEVGELVKVTKINVSGQWEGEC-NGKRGHFPFTHVRLLDQ  296 (304)
T ss_dssp             CCSCCSSCBCCCTTCSSCCCBCTTSCCEEEEECTTSCEEEEE-TTEEEECCCTTSCCCSS
T ss_pred             EEEEEeeeecCCCCCCCeecccCCCEEEEEEecCCCeEEEEE-CCceEEechHHEEECCC
Confidence            468999999943323349999999999999998899999997 79999999999998764

>1tuc_A Alpha-spectrin; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton; 2.02A {Gallus gallus} SCOP: b.34.2.1

Probab=99.39  E-value=8.3e-13  Score=73.55  Aligned_cols=43  Identities=37%  Similarity=0.753  Sum_probs=39.3

Q ss_pred             CCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758          22 KYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus        22 ~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .||+|++||+|.|+++.+++||.++. +|+.|+||++||+.+.+
T Consensus         4 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   46 (63)
T 1tuc_A            4 REVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKLDS   46 (63)
T ss_dssp             CCCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEECSC
T ss_pred             cccCCCCCCEEEEEEecCCCEEEEEE-CCcEEEEeHHHEEEcCC
Confidence            39999999999999998889999985 89999999999998765

>1ri9_A FYN-binding protein; SH3-like, helically extended, signaling protein; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=99.38  E-value=1.7e-13  Score=82.76  Aligned_cols=57  Identities=23%  Similarity=0.213  Sum_probs=47.1

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      ++|+|+|.....+..+|+|++|+.|.||+..+.+||.+|+..|+.||||.+|+....
T Consensus        42 ~~a~~~f~~~k~g~~DLpfkkGE~LeVI~~~e~~wwLcRNs~GkyGyVP~~yl~~~d   98 (102)
T 1ri9_A           42 TKVTTSITSKKWGTRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYLADND   98 (102)
T ss_dssp             CBCCTTSCSSCCCTTBCCCCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGSCC--
T ss_pred             EEEeeccccccCCcccCCcCCCCEEEEEEeCCCCEEEEECCCCCCCceeHHHhcccc
Confidence            567888833333345999999999999999988999999999999999999998654

>1gri_A Growth factor bound protein 2; SH2, SH3, signal transduction adaptor; 3.10A {Homo sapiens} SCOP: b.34.2.1 b.34.2.1 d.93.1.1 PDB: 1aze_A 2a37_A 2azv_A 2a36_A 2azs_A

Probab=99.38  E-value=4.8e-13  Score=90.10  Aligned_cols=55  Identities=22%  Similarity=0.554  Sum_probs=45.0

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      .++|+|+|.++..+  ||+|++||+|.|+.+. +.+||.++. +|+.|+||++||+...
T Consensus         2 ~~~al~~~~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~~~~-~g~~G~~P~~yv~~~~   57 (217)
T 1gri_A            2 EAIAKYDFKATADD--ELSFKRGDILKVLNEECDQNWYKAEL-NGKDGFIPKNYIEMKP   57 (217)
T ss_dssp             EEEECSCBCCCSSS--CCCBCTTCEEEC------CCEEEEES-SSCEEEEEGGGEECCC
T ss_pred             EEEEeeccCCcCCC--cCCCCCCCEEEEEeccCCCCeEeecc-CCccceECCccccccc
Confidence            58999999998777  9999999999999886 678999985 8999999999998654

>1qcf_A Haematopoetic cell kinase (HCK); tyrosine kinase-inhibitor complex, DOWN-regulated kinase, ordered activation loop; HET: PTR PP1; 2.00A {Homo sapiens} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 2c0i_A* 2c0o_A* 2c0t_A* 1ad5_A* 2hck_A* 3nhn_A 3hck_A 1bu1_A 3rea_B 3rbb_B

Probab=99.37  E-value=1.1e-12  Score=96.22  Aligned_cols=57  Identities=21%  Similarity=0.639  Sum_probs=50.4

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|||+++.++  ||+|++||++.|++++ ++||.+++ .+|+.|+||+|||.....
T Consensus         9 ~~~~al~~~~~~~~~--el~~~~gd~~~v~~~~-~~W~~~~~~~~g~~G~~P~~yv~~~~~   66 (454)
T 1qcf_A            9 IIVVALYDYEAIHHE--DLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVDS   66 (454)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEECC-TTEEEEEETTTCCEEEEEGGGEEETTC
T ss_pred             eEEEECcccCCcCCC--cCcccCCCEEEEEecC-CCCeEEEECCCCceEEecchhcccccc
Confidence            468999999998777  9999999999999985 78999997 578999999999987643

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.06  E-value=4.8e-14  Score=99.85  Aligned_cols=58  Identities=28%  Similarity=0.607  Sum_probs=52.4

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|+|+|+++..+  +|+|++||+|.|+++.+++||.+++.+|+.|+||++||+.+..
T Consensus       126 ~~~~alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yv~~~~~  183 (303)
T 2lqn_A          126 EYVRTLYDFPGNDAE--DLPFKKGEILVIIEKPEEQWWSARNKDGRVGMIPVPYVEKLVR  183 (303)
Confidence            358999999998777  9999999999999998889999997788999999999998654

>2de0_X Alpha-(1,6)-fucosyltransferase; FUT8, glycosyltransferase, N-glycan, COR SH3 domain; 2.61A {Homo sapiens}

Probab=99.36  E-value=1.2e-12  Score=98.89  Aligned_cols=58  Identities=12%  Similarity=0.128  Sum_probs=51.7

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|+|+|.++.++  ||+|++||+|.|+.+.+++||.|++ .+|+.|+||+|||+.+..
T Consensus       443 ~~~~aly~y~a~~~d--ELs~~~GD~i~v~~~~~~gW~~G~~~~~g~~G~fPsnyV~~~~~  501 (526)
T 2de0_X          443 HNQIAIYAHQPRTAD--EIPMEPGDIIGVAGNHWDGYSKGVNRKLGRTGLYPSYKVREKIE  501 (526)
T ss_dssp             CEEEECSCBCCSSTT--BCCBCTTCEEEEEEECSSSEEEEEETTTTEEEEEEGGGEEECCC
T ss_pred             cceEEeecCCCCCCC--cCCcCCCCEEEEccccCCCeeEEEeCCCCCEEEECchheeEccc
Confidence            358999999998777  9999999999999998899999996 478999999999987643

>1opk_A P150, C-ABL, proto-oncogene tyrosine-protein kinase ABL1; transferase; HET: MYR P16; 1.80A {Mus musculus} SCOP: b.34.2.1 d.93.1.1 d.144.1.7 PDB: 1opl_A* 2fo0_A* 2abl_A

Probab=99.36  E-value=1.1e-12  Score=97.33  Aligned_cols=57  Identities=26%  Similarity=0.459  Sum_probs=50.1

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|+|||++...+  ||+|++||++.|+++. +.+||.++. .|+.|+||+|||+....
T Consensus        44 ~~~~alyd~~~~~~~--els~~~gd~~~v~~~~~~~~w~~~~~-~~~~G~~P~~yv~~~~~  101 (495)
T 1opk_A           44 NLFVALYDFVASGDN--TLSITKGEKLRVLGYNHNGEWCEAQT-KNGQGWVPSNYITPVNS  101 (495)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEEECTTSSEEEEEC-SSCEEEEEGGGEEESSS
T ss_pred             cEEEEeCCcCCCCCC--CCCccCCCEEEEeecCCCCCceeeee-cCCcceecccccccccc
Confidence            368999999998777  9999999999999986 778999997 67889999999997644

>2lqn_A CRK-like protein; SH2, SH3, V-CRK sarcoma virus CT10 oncogene homolog (avian)- signaling protein; NMR {Homo sapiens} PDB: 2lqw_A*

Probab=99.05  E-value=6.1e-14  Score=99.31  Aligned_cols=59  Identities=14%  Similarity=0.191  Sum_probs=51.7

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|+|+++..+..||+|++||+|.|+++.+++||.|+. +|+.|+||++||+.+..
T Consensus       238 ~~~~alydy~~~~~~~~eLs~~~Gd~i~v~~~~~~gWw~g~~-~g~~G~fP~~yv~~~~~  296 (303)
T 2lqn_A          238 VFAKAIQKRVPCAYDKTALALEVGDIVKVTRMNINGQWEGEV-NGRKGLFPFTHVKIFDP  296 (303)
Confidence            468999999876655559999999999999998889999986 88999999999998754

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=99.34  E-value=8.4e-13  Score=76.27  Aligned_cols=43  Identities=37%  Similarity=0.753  Sum_probs=39.4

Q ss_pred             CCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758          22 KYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus        22 ~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+|+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus         6 ~eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~~~~   48 (77)
T 2jmc_A            6 REVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKLDS   48 (77)
T ss_dssp             CCCCCCTTCEEECCCCCCSSCCCEEE-TTEEECCCGGGEEECCC
T ss_pred             CccCCCCCCEEEEEEecCCCEEEEEE-CCcEEEEEeeEEEEcCC
Confidence            49999999999999998889999985 89999999999998765

>1kjw_A Postsynaptic density protein 95; protein-protein interaction, scaffold, neuropeptide; 1.80A {Rattus norvegicus} SCOP: b.34.2.1 c.37.1.1 PDB: 1jxm_A* 1jxo_A

Probab=99.30  E-value=6.1e-13  Score=94.05  Aligned_cols=58  Identities=19%  Similarity=0.456  Sum_probs=48.4

Q ss_pred             EEEEEEeccCCCCCC---CCCccccCCCEEEEEEcCCCCceEEEcCC-----CcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKD---GKYVRIQEGEKLFLIKKTNKDWWQVIRSS-----GKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~---~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~-----g~~G~vP~~yv~~~   63 (101)
                      ++++|+|||++..++   ..+|+|++||+|.|+++.+++||+++..+     |..|+||+||+.+.
T Consensus         2 ~~vrAlydy~~~~~~~~p~~eLsf~~GDil~V~~~~d~~WW~a~~~~~~~~~~~~G~iPsny~~e~   67 (295)
T 1kjw_A            2 FYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVER   67 (295)
T ss_dssp             EEEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred             EEEEEeeccCCCCCCCCCCcCCcCCCCCEEEEEEeCCCCeEEEEECCCCCccCceeEeecHHHHHH
Confidence            679999999875432   24999999999999999889999999853     37799999999654

>3haj_A Human pacsin2 F-BAR; pacsin,syndapin,FAP52,F-BAR, alternative splicing, coiled coil, cytoplasmic vesicle, endocytosis, phosphoprotein, polymorphism; 2.78A {Homo sapiens}

Probab=99.27  E-value=3.7e-13  Score=100.52  Aligned_cols=57  Identities=25%  Similarity=0.514  Sum_probs=0.0

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ...++|+|||.+...+  +|+|.+||+|.|+.+. +++||.|+...|..|+||++||+.+
T Consensus       428 ~~~~~alydy~~~~~~--eLsf~~Gd~i~vl~~~~~~~Ww~g~~~~g~~G~~P~nyv~~i  485 (486)
T 3haj_A          428 EVRVRALYDYEGQEHD--ELSFKAGDELTKMEDEDEQGWCKGRLDNGQVGLYPANYVEAI  485 (486)
T ss_dssp             ------------------------------------------------------------
T ss_pred             CeEEEEccccCCCCCC--cCccCCCCEEEEEEecCCCCeeEEEeCCCCEEEEeHHHceeC
Confidence            4568999999988777  9999999999999987 4589999985589999999999865

>3qwy_A Cell death abnormality protein 2; cell engulfment, signaling protein; 2.52A {Caenorhabditis elegans}

Probab=99.25  E-value=5.8e-13  Score=94.37  Aligned_cols=59  Identities=19%  Similarity=0.306  Sum_probs=0.0

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|+|.+...+..||+|++||+|.|+.+.+++||.++. +|+.|+||+|||+.+..
T Consensus       248 ~~a~alyd~~~~~~~~~ELs~~~Gd~i~v~~~~~~~ww~g~~-~g~~G~fP~~yv~~~~~  306 (308)
T 3qwy_A          248 AKAKVTFDRVPNAYDPTQLRVKKGQTVLVTQKMSNGMYKAEL-DGQIGSVPHTYLRFTAV  306 (308)
T ss_dssp             ------------------------------------------------------------
T ss_pred             cccccccccccccCCcccceeCCCCEEEEEEEcCCCcEEEEE-CCeeEEechHHeEEecC
Confidence            367999999665553449999999999999997789998886 88999999999998754

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=99.24  E-value=1.6e-11  Score=68.00  Aligned_cols=41  Identities=34%  Similarity=0.673  Sum_probs=36.9

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR   47 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~   47 (101)
                      ...++|+|+|+++..+  +|+|++||+|.|+++.+++||.++.
T Consensus        21 ~~~~~alydy~a~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~   61 (62)
T 1g2b_A           21 KELVLALYDYQEKSPR--EVTMKKGDILTLLNSTNKDWWKVEV   61 (62)
T ss_dssp             SCEEEECSCBCCSSTT--BCCBCTTCEEEEEECCSSSEEEEEE
T ss_pred             ceEEEEeeeECCCCCC--ccCCCCCCEEEEEEecCCCEEEEEe
Confidence            4578999999998777  9999999999999998889999874

>2gtj_A FYN-binding protein; SH3, redox, signaling protein; NMR {Homo sapiens} PDB: 2gto_A

Probab=99.23  E-value=5.6e-12  Score=75.44  Aligned_cols=53  Identities=23%  Similarity=0.370  Sum_probs=45.4

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCC--CCceEEEcCCCcEEEEcCCceEe
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~--~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      .++|+|+.. .+..  +|+|.+|+.|.||+..+  ++||.+|+..|..||||.+||+.
T Consensus        30 ~a~a~~~~k-~g~~--dLp~~~GE~LeII~~~e~p~g~Wl~RN~~G~~GyVp~~~v~v   84 (96)
T 2gtj_A           30 LAKACCDVK-GGKN--ELSFKQGEQIEIIRITDNPEGKWLGRTARGSYGYIKTTAVEI   84 (96)
T ss_dssp             EEEESSCEE-CTTS--CCEECTTCCEEEEECTTCSSSCCEEECTTCCBCCCCGGGEEE
T ss_pred             EEEEeecCC-CCcc--cCCcCCCCEEEEEEccCCCCCeEEEECCCCCCCccchhhEEE
Confidence            578898843 3344  99999999999999875  57999999999999999999975

>4dey_A Voltage-dependent L-type calcium channel subunit; maguk, voltage dependent calcium channel, transport protein; 1.95A {Oryctolagus cuniculus} PDB: 4dex_A 1t3l_A 1t3s_A 1vyv_A 1vyu_A 1vyt_A 1t0h_B 1t0j_B 1t0h_A 1t0j_A

Probab=99.21  E-value=1.3e-11  Score=88.67  Aligned_cols=56  Identities=14%  Similarity=0.305  Sum_probs=47.2

Q ss_pred             CcEEEEEEeccCCCCCCC-----CCccccCCCEEEEEEcCCCCceEEEcC--CCcEEEEcCCc
Q psy6758           4 QDVTLKVLYDFDYSTKDG-----KYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASY   59 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~-----~eLs~~~g~~l~vl~~~~~~Ww~~~~~--~g~~G~vP~~y   59 (101)
                      ..++++|+|||++..++.     .+|+|++||+|.|+++.+++||.++..  +|..|+||+++
T Consensus        37 ~~~~vrAlfdY~~~~d~d~P~~e~~LsF~~GDiL~V~~~~d~~WWqar~~~~~g~~GlIPS~~   99 (337)
T 4dey_A           37 VAFAVRTNVSYSAAHEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPV   99 (337)
T ss_dssp             CCEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHH
T ss_pred             ccEEEEEccccCCCCCCCCCcccccccccCCCEEEEEecCCCCeEEEEECCCCCCccEecCHH
Confidence            356899999999876441     259999999999999999999999984  46789999987

>3pvl_A Myosin VIIA isoform 1; protein complex, novel folding, protein cargo binding, cargo proteins, motor protein-protein transport complex; 2.80A {Mus musculus}

Probab=99.17  E-value=1.6e-11  Score=94.69  Aligned_cols=66  Identities=15%  Similarity=0.218  Sum_probs=53.0

Q ss_pred             CcEEEEEEeccCCC-CCCCCCccccCCCEEEEEEc-----CCCCceEEEc-CCCcEEEEcCCceEeccccCCC
Q psy6758           4 QDVTLKVLYDFDYS-TKDGKYVRIQEGEKLFLIKK-----TNKDWWQVIR-SSGKPFYVPASYVEVYKKLSNG   69 (101)
Q Consensus         4 ~~~~~~aly~f~~~-~~~~~eLs~~~g~~l~vl~~-----~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~~~~~   69 (101)
                      +..+++|+|||... +.++..|+|++||+|.|+++     .+++||.|++ .+|+.|+||++||..+++...+
T Consensus       572 rs~~~~Al~d~~~~~~~~~~~L~f~kGDlI~l~~~~~~~~~~~~W~~G~~~~~g~~G~fP~~~V~~lptl~~p  644 (655)
T 3pvl_A          572 RSKYVVALQDNPNPAGEESGFLSFAKGDLIILDHDTGEQVMNSGWANGINERTKQRGDFPTDCVYVMPTVTLP  644 (655)
T ss_dssp             HCCEEEESSCCCC-----CCBCCCCTTCEEEESSCCHHHHHHSSEEEEEETTTCCEEEEEGGGEEECCCSSCC
T ss_pred             cchhhhHHhhcccCCCCCCCcccccCCCEEEEccccCcccCCCCeEEEEeCCCCceEEeEhhhEEECCCCCCC
Confidence            45689999999843 33456999999999999888     3678999996 4789999999999999876544

>3pe0_A Plectin; cytoskeleton, plakin, spectrin repeat, SH3, structural prote intermediate filament, crosslinking; 2.95A {Homo sapiens}

Probab=99.09  E-value=1.6e-10  Score=81.19  Aligned_cols=57  Identities=23%  Similarity=0.367  Sum_probs=47.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +...++|+|||.+   .  ++++.+|+.+.+++.++..||.++..+|.+|+||++|+...++
T Consensus       197 ~~~~v~al~dy~~---~--e~~~~kge~~~l~~~s~~~wW~v~~~~G~~g~vPs~~~~ip~p  253 (283)
T 3pe0_A          197 GRLPLLAVCDYKQ---V--EVTVHKGDECQLVGPAQPSHWKVLSSSGSEAAVPSVCFLVPPP  253 (283)
T ss_dssp             SCEEEEECSCEEC---S--SCEECTTCEEEEEEECSTTEEEEECC---EEEEEGGGEECCSC
T ss_pred             CCceEEeecCccC---C--cccccCCCEEEEeeCCCCCceEEEcCCCCEeeccceEEeeCCC
Confidence            3468999999965   3  8999999999999998889999999889999999999976554

>3tsz_A Tight junction protein ZO-1; PDZ3-SH3-GUK, scaffolding, JAM, tight junction, cell adhesio; 2.50A {Homo sapiens} PDB: 3tsw_A 3lh5_A

Probab=99.05  E-value=1.7e-10  Score=84.30  Aligned_cols=58  Identities=10%  Similarity=0.229  Sum_probs=48.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEc---CCCCceEEEcCCC-----cEEEEcCCceEec
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVIRSSG-----KPFYVPASYVEVY   63 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~---~~~~Ww~~~~~~g-----~~G~vP~~yv~~~   63 (101)
                      ..++++|+|||++..+.  +|+|++||++.|++.   .+.+||+++....     ..|+||++|+.+.
T Consensus       105 ~~~~vral~dy~~~~~~--~Lsf~~Gdil~V~~~~~~~d~~wW~a~~~~~~~~~~~~G~IPs~~~~e~  170 (391)
T 3tsz_A          105 DSFYIRTHFEYEKESPY--GLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQ  170 (391)
T ss_dssp             CCEEEEECSCBCCSSTT--BCCBCTTCEEEEEESSGGGSSSEEEEEEECGGGCEEEEEEEECHHHHHH
T ss_pred             cccccccccccCCCCCC--cceEccCCEEEEEeccCCCCCCeEEEEEeCCCCCcccCCEecCHHHHHH
Confidence            46789999999986544  999999999999998   4678999998443     4799999999754

>3kfv_A Tight junction protein ZO-3; structural genomics consortium, SGC, cell junction, cell membrane, membrane, SH3 domain; 2.80A {Homo sapiens}

Probab=99.04  E-value=2e-10  Score=81.67  Aligned_cols=57  Identities=9%  Similarity=0.259  Sum_probs=45.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCC---------ceEEEcCC-----CcEEEEcCCceEe
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD---------WWQVIRSS-----GKPFYVPASYVEV   62 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~---------Ww~~~~~~-----g~~G~vP~~yv~~   62 (101)
                      ..++++|+|+|++..++  +|+|++||++.|++..+++         ||.+++..     +..|+||++|+.+
T Consensus         3 dsfyVRalfdy~~~~~~--eL~F~kGDil~V~dt~~~~~~~~~~~~gwW~A~~~~~~~~~~~~G~IPs~~~ae   73 (308)
T 3kfv_A            3 DSFYIRTHFELEPSPPS--GLGFTRGDVFHVLDTLHPGPGQSHARGGHWLAVRMGRDLREQERGIIPNQSRAE   73 (308)
T ss_dssp             CCEEEEECSCBCCCSSS--BCCBCTTCEEEEEEC-------------CEEEEEECTTSCEEEEEEECCHHHHH
T ss_pred             ccEEEEEecCcCCCCcc--cCCCccCCEEEEccccCCCcccccccCceEEEEecCCCCCcCCCCeeechHHHH
Confidence            45789999999988666  9999999999999987655         99998843     2679999999865

>2xkx_A Disks large homolog 4; structural protein, scaffold protein, membrane associated GU kinase; 22.9A {Rattus norvegicus}

Probab=99.02  E-value=2.6e-10  Score=88.60  Aligned_cols=58  Identities=19%  Similarity=0.444  Sum_probs=48.8

Q ss_pred             CcEEEEEEeccCCCCCCCCC-----ccccCCCEEEEEEcCCCCceEEEcCC-----CcEEEEcCCceEec
Q psy6758           4 QDVTLKVLYDFDYSTKDGKY-----VRIQEGEKLFLIKKTNKDWWQVIRSS-----GKPFYVPASYVEVY   63 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~e-----Ls~~~g~~l~vl~~~~~~Ww~~~~~~-----g~~G~vP~~yv~~~   63 (101)
                      ..++++|+|+|++..++  +     |+|++||+|.|++..+.+||.++...     +..|+||++|+.+.
T Consensus       426 ~~~~vrAl~dy~~~~d~--~~p~~~LsF~~GDil~v~~~~~~~WW~a~~~~~~~~~~~~G~iPs~~~~e~  493 (721)
T 2xkx_A          426 RGFYIRALFDYDKTKDC--GFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVER  493 (721)
T ss_pred             cceeEEEeeccCcCCCC--CCccccccccCCCEEEEeecCCCCeEEEEECCCCCccCccceeecHHHHHH
Confidence            34688999999988666  6     99999999999999889999998742     24699999998653

>1ug1_A KIAA1010 protein; structural genomics, SH3 domain, hypothetical protein BAA76854.1, riken structural genomics/proteomics initiative RSGI; NMR {Homo sapiens} SCOP: b.34.2.1

Probab=98.97  E-value=3.5e-09  Score=62.64  Aligned_cols=55  Identities=20%  Similarity=0.332  Sum_probs=42.0

Q ss_pred             EEeccCCCCCCCCCccccCCCEEEEEEcCC----CCceEEEcCCCcEEEEcCCceEeccccC
Q psy6758          10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTN----KDWWQVIRSSGKPFYVPASYVEVYKKLS   67 (101)
Q Consensus        10 aly~f~~~~~~~~eLs~~~g~~l~vl~~~~----~~Ww~~~~~~g~~G~vP~~yv~~~~~~~   67 (101)
                      +..+|.++  ...+|++++||++-||++.|    ..||++++ +|..||||++|++.+.+..
T Consensus        22 ~t~~~~~t--q~~dl~l~~GdlVAVl~k~Dp~Gn~srW~Vdt-gg~~GyvPs~yLe~~~~~~   80 (92)
T 1ug1_A           22 AERNFNAA--QDLDVSLLEGDLVGVIKKKDPMGSQNRWLIDN-GVTKGFVYSSFLKPYNPRR   80 (92)
T ss_dssp             ESSCCCCC--SSSCCCCCTTCEEEEEESCCTTSCSSEEEEEC-SSSEEEEEGGGEEECCCCS
T ss_pred             eccCcCCC--CceeeeecCCCEEEEEecCCCCCCCcceEEEC-CCcEEeeEhhhceEcccCC
Confidence            33344433  44599999999999999863    35677877 8899999999999887633

>3shw_A Tight junction protein ZO-1; PDZ-SH3-GUK supramodule, cell adhesion; 2.90A {Homo sapiens}

Probab=98.96  E-value=7e-10  Score=82.76  Aligned_cols=58  Identities=10%  Similarity=0.227  Sum_probs=48.8

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEc---CCCCceEEEcCC--C---cEEEEcCCceEec
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVIRSS--G---KPFYVPASYVEVY   63 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~---~~~~Ww~~~~~~--g---~~G~vP~~yv~~~   63 (101)
                      ..++++|+|+|++..+.  +|+|++||++.|++.   .+.+||++++..  +   ..|+||++|+.+.
T Consensus        97 ~s~yVralfdy~~~~~~--~LsF~~GDIL~V~d~~~~~d~~wW~A~~~~~~~~~~~~GlIPs~~~~e~  162 (468)
T 3shw_A           97 DSFYIRTHFEYEKESPY--GLSFNKGEVFRVVDTLYNGKLGSWLAIRIGKNHKEVERGIIPNKNRAEQ  162 (468)
T ss_dssp             CCEEEEECSCBCCSSTT--BCCBCTTCEEEEEESSGGGCTTEEEEEEECTTSCEEEEEEEECHHHHHH
T ss_pred             cccccccccCcCCCCCC--CceEccCCEEEEeecccCCCCCeEEEEEcCCCCcccccceecCHHHHHH
Confidence            46789999999987655  999999999999998   567899998843  2   5799999999753

>3tvt_A Disks large 1 tumor suppressor protein; DLG, SRC-homology-3, guanylate kinase, phosphorylation-depen cell membrane; 1.60A {Drosophila melanogaster} PDB: 3uat_A*

Probab=98.94  E-value=9.3e-10  Score=77.74  Aligned_cols=56  Identities=21%  Similarity=0.534  Sum_probs=40.3

Q ss_pred             CcEEEEEEeccCCCCCC---CCCccccCCCEEEEEEcCCCCceEEEcCC--C---cEEEEcCCc
Q psy6758           4 QDVTLKVLYDFDYSTKD---GKYVRIQEGEKLFLIKKTNKDWWQVIRSS--G---KPFYVPASY   59 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~---~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~--g---~~G~vP~~y   59 (101)
                      +.++++|+|||++..++   +..|+|++||+|.|++..+++||.+++..  +   ..|+||+..
T Consensus         4 ~s~yvRa~fdY~~~~D~~~P~~gL~F~~gDiL~V~~~~d~~wWqA~~v~~~~~~~~~GlIPS~~   67 (292)
T 3tvt_A            4 RSLYVRALFDYDPNRDDGLPSRGLPFKHGDILHVTNASDDEWWQARRVLGDNEDEQIGIVPSKR   67 (292)
T ss_dssp             -CCEEEECSCBCC---------CCCBCTTCEEEEEECCSSSEEEECCCCC--------EEECHH
T ss_pred             ceEEEEEeccCCCCCCCCCCCCcCCcCCCCEEEEeecCCCCeEEEEEeCCCCCccceeEEeChH
Confidence            56799999999986543   23699999999999999999999998742  2   479999853

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=98.92  E-value=1.7e-09  Score=72.85  Aligned_cols=56  Identities=25%  Similarity=0.635  Sum_probs=48.1

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCC---ceEEEcCCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD---WWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~---Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+.++|+|.+....  +|++..|+.+.|+.+.+.+   ||.++. +|+.|+||.+||+.++.
T Consensus       172 ~~~al~d~~~~~~~--eLa~~~G~~i~vl~~~~~~~~~Ww~~~~-~~~~G~~P~~yv~~~~~  230 (239)
T 1ycs_B          172 VIYALWDYEPQNDD--ELPMKEGDCMTIIHREDEDEIEWWWARL-NDKEGYVPRNLLGLYPR  230 (239)
T ss_dssp             EEEESSCBCCSSTT--BCCBCSSCEEEECCCCTTSCSSEEEEEE-TTEEEEEEGGGEECCC-
T ss_pred             eEEEEeccCCCCCC--cccccCCCEEEEEEecCCCCCCEEEEEE-CCcEEEeehHHeeECCc
Confidence            46789999888776  9999999999999887554   999986 88999999999997754

>3r6n_A Desmoplakin; spectrin repeat, SH3 domain, cell adhesion, desmosome; 2.95A {Homo sapiens}

Probab=98.76  E-value=1e-08  Score=76.24  Aligned_cols=57  Identities=19%  Similarity=0.392  Sum_probs=50.5

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +...|+|||||+.   .  ++++.+||.+++++.++..||.++..+|.+|+||+.|+.+.++
T Consensus       282 ~~~~V~alcdy~~---~--e~~i~kge~~~L~~ns~~~~W~V~~~~G~~~~vPavcf~ippp  338 (450)
T 3r6n_A          282 KPIILRALCDYKQ---D--QKIVHKGDECILKDNNERSKWYVTGPGGVDMLVPSVGLIIPPP  338 (450)
T ss_dssp             SCCEEEESSCEEE---T--TEEECTTCEEEEEECSSSSEEEEECSSSCCEEEEGGGEECCSC
T ss_pred             CCceEEEeccccC---C--eeeEecCCEEEEecCCCCCceEEecCCCCeeccceeEEecCCC
Confidence            4567999999973   3  9999999999999999999999999889999999999976554

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=98.53  E-value=1.1e-07  Score=62.87  Aligned_cols=55  Identities=25%  Similarity=0.651  Sum_probs=48.9

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ..++|+|+|+++..+  +|+|++|+++.+++..+.+||.+.. .|..|++|.+|+...
T Consensus        15 ~~~~al~d~~~~~~~--el~~~~Gd~~~v~~~~~~~w~~~~~-~g~~gl~p~~~v~~~   69 (222)
T 3ehr_A           15 KVFRALYTFEPRTPD--ELYIEEGDIIYITDMSDTNWWKGTS-KGRTGLIPSNYVAEQ   69 (222)
T ss_dssp             EEEEESSCCCCSSTT--BCCCCTTCEEEEEECCSSSEEEEEE-TTEEEEEEHHHHHHH
T ss_pred             eEEEEeCCcCCCCCC--cccccCCCEEEEeccccchhHhccc-CCcceeechhhcccc
Confidence            357999999998777  9999999999999998889999987 789999999998653

>2dyb_A Neutrophil cytosol factor 4; P40(PHOX), NADPH oxidase, oxidoreductase; HET: CAF; 3.15A {Homo sapiens}

Probab=97.74  E-value=1.6e-07  Score=67.26  Aligned_cols=57  Identities=11%  Similarity=0.105  Sum_probs=40.8

Q ss_pred             EEEeccCCCC--CCCCCccc--cCCCEEEEEEcCCCCceEEEc--CCCcEEEEcCC-ceEeccc
Q psy6758           9 KVLYDFDYST--KDGKYVRI--QEGEKLFLIKKTNKDWWQVIR--SSGKPFYVPAS-YVEVYKK   65 (101)
Q Consensus         9 ~aly~f~~~~--~~~~eLs~--~~g~~l~vl~~~~~~Ww~~~~--~~g~~G~vP~~-yv~~~~~   65 (101)
                      +|+|+|.+..  .+..+|.|  .+||+|.|+.+.+.+||.|+.  ..|+.|+||.+ ||+....
T Consensus       270 ~a~yd~~~~~~~~~e~eL~~~~~~GD~I~v~~~~d~gWw~Ge~~g~~G~~glfP~~~~v~~~~~  333 (341)
T 2dyb_A          270 KDLLELTRREFQREDIALNYRDAEGDLVRLLSDEDVALMVRQARGLPSQKRLFPWKLHITQKDN  333 (341)
T ss_dssp             HHHHHHHHHHHTCSCEEEEEECSSSCEEECCSHHHHHHHHHHHTTSCCBTTBCSSCEEEEECC-
T ss_pred             hhhhhhhhhhcCCCcccccCCCCCCCEEEEeeecCCCEeEEEECCCCCCCceecceeEEEecCC
Confidence            4567776522  33236666  899999999998889999975  34667799998 7776543

>2krs_A Probable enterotoxin; all beta, SH3, ENTD, CPF_0587, CPE0606, structural genomics, PSI-2, protein structure initiative; NMR {Clostridium perfringens}

Probab=96.71  E-value=0.0047  Score=34.65  Aligned_cols=40  Identities=23%  Similarity=0.532  Sum_probs=33.6

Q ss_pred             ccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758          24 VRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus        24 Ls~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      -.+.+|+.+.|+... .+|++++. .|..|||...|+.....
T Consensus        25 ~~l~~G~~v~v~~~~-~~W~kV~~-~g~~GwV~~~yl~~~~~   64 (74)
T 2krs_A           25 GTLRNNDKVEIIKEV-DGWYEIRF-NGKVGYASKSYITIVNE   64 (74)
T ss_dssp             EEEETTCEEEEEEEE-TTEEEEEE-TTEEEEECSSSEEESSS
T ss_pred             EEECCCCEEEEEEEe-CCEEEEEE-CCeEEEEEhHHcCCCCC
Confidence            367889999999875 57999987 58999999999987554

>2kt8_A Probable surface protein; SH3 family, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; NMR {Clostridium perfringens} PDB: 2kyb_A

Probab=96.70  E-value=0.0039  Score=35.24  Aligned_cols=40  Identities=15%  Similarity=0.319  Sum_probs=33.9

Q ss_pred             ccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758          24 VRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus        24 Ls~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      -.+..|+.+.|+.+. .+|++++. +|..|||...|+.....
T Consensus        27 ~~l~~G~~v~vl~~~-~~W~kV~~-~g~~GwV~~~yl~~~~~   66 (76)
T 2kt8_A           27 GSLSGNTKVTIVGEE-GAFYKIEY-KGSHGYVAKEYIKDIKD   66 (76)
T ss_dssp             EEECTTCEEEEEEEE-TTEEEEEE-TTEEEEEEGGGEEEEEC
T ss_pred             EEECCCCEEEEEEEe-CCEEEEEE-CCEEEEEEhHHhCcCCC
Confidence            367799999999875 57999997 79999999999987654

>2kq8_A Cell WALL hydrolase; GFT protein structure, NESG, PSI, SH3 domain, structural genomics, protein structure initiative; NMR {Bacillus thuringiensis serovarkonkukian}

Probab=95.93  E-value=0.0021  Score=35.74  Aligned_cols=39  Identities=18%  Similarity=0.451  Sum_probs=32.3

Q ss_pred             ccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758          24 VRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus        24 Ls~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      -.+.+|+.+.|+... .+|++++. +|..|||...|+....
T Consensus        26 ~~l~~G~~v~v~~~~-~~W~~V~~-~G~~GwV~~~~l~~~~   64 (70)
T 2kq8_A           26 GALPQGQKVQVISEN-SGWSKINY-NGQTGYIGTRYLSKLE   64 (70)
T ss_dssp             CCCCSSSSCCCCEEE-TTEEEEEE-TTEEEEEETTSCSCCC
T ss_pred             EEECCCCEEEEEEec-CCEEEEEE-CCEEEEEEhHHccchh
Confidence            357789999998874 57999998 8999999999997543

>1g2b_A Spectrin alpha chain; capping protein, calcium-binding, duplication, repeat, SH3 domain, cytoskeleton, metal binding protein; 1.12A {Gallus gallus} SCOP: b.34.2.1 PDB: 1tud_A

Probab=94.71  E-value=0.034  Score=29.65  Aligned_cols=16  Identities=31%  Similarity=0.590  Sum_probs=13.3

Q ss_pred             CcEEEEcCCceEeccc
Q psy6758          50 GKPFYVPASYVEVYKK   65 (101)
Q Consensus        50 g~~G~vP~~yv~~~~~   65 (101)
                      |+.|+||++|++....
T Consensus         2 g~~G~~P~~yv~~~~~   17 (62)
T 1g2b_A            2 DRQGFVPAAYVKKLDS   17 (62)
T ss_dssp             CEEEEEEGGGEEECCC
T ss_pred             CCccccccceEeecCC
Confidence            5789999999997654

>1wfw_A Kalirin-9A; SH3 domain, neuron-specific GDP/GTP exchange factor, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: b.34.2.1

Probab=94.63  E-value=0.17  Score=28.26  Aligned_cols=51  Identities=18%  Similarity=0.312  Sum_probs=39.4

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCC-----cEEEEcCCc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSG-----KPFYVPASY   59 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g-----~~G~vP~~y   59 (101)
                      .+.+.-||.+..++  ++++..|+++.++.-...+...+-+...     .+||+|..-
T Consensus         9 ~m~V~~dY~A~ke~--eI~v~~ge~Vqila~nqqnm~Lv~~~a~~q~paaegWvPG~v   64 (74)
T 1wfw_A            9 TMTVIKDYYALKEN--EICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSI   64 (74)
T ss_dssp             EEECCSCBCCCSSS--CCCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGG
T ss_pred             cEEEEeeeeeeccc--eeccccCcEEEEEEecCcceEEEEeecCCCCccccCcccccE
Confidence            34557789887666  9999999999999987777777765322     689999754

>2jmc_A Spectrin alpha chain, brain and P41 peptide chimera; SPC-SH3, signaling protein; NMR {Gallus gallus}

Probab=94.38  E-value=0.021  Score=31.89  Aligned_cols=23  Identities=17%  Similarity=0.203  Sum_probs=19.2

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCC
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEG   29 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g   29 (101)
                      ...++|+|+|+++..+  ||+|.+.
T Consensus        52 ~~~~~alydy~a~~~d--Elsf~~~   74 (77)
T 2jmc_A           52 KELVLALYDYQESGDN--APSYSPP   74 (77)
T ss_dssp             CCEEEESSCCCCSSCC--CCCSCCC
T ss_pred             CceEEECCCcCCCCCC--ccccCCC
Confidence            3578999999998887  9999864

>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A

Probab=93.61  E-value=0.11  Score=36.33  Aligned_cols=40  Identities=8%  Similarity=0.174  Sum_probs=33.1

Q ss_pred             CccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758          23 YVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus        23 eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      .-.+..|+.+.|++++  +|++++..+|..|||+..++....
T Consensus        34 ~~~l~~G~~v~Vl~~~--gW~~V~~~dG~~GwV~~~~l~~~~   73 (306)
T 3npf_A           34 STQALLGMPVKVLQYN--GWYEIQTPDDYTGWVHRMVITPMS   73 (306)
T ss_dssp             EEEEETTCEEEEEEES--SEEEEECTTSCEEEEEGGGEEEEC
T ss_pred             eEEEcCCCEEEEEEEC--CEEEEEcCCCCEEEEEhHHeeecC
Confidence            4456789999999973  599999878899999999997643

>3cxl_A N-chimerin; SH2, RHO-GAP, structural genomics consortium, SGC, gtpas activation, metal-binding, phorbol-ester binding, SH2 domai finger; 2.60A {Homo sapiens} PDB: 1xa6_A

Probab=87.97  E-value=0.013  Score=43.39  Aligned_cols=27  Identities=7%  Similarity=-0.032  Sum_probs=19.0

Q ss_pred             cCCCCceEEEcCC-CcEEEEcCCceEec
Q psy6758          37 KTNKDWWQVIRSS-GKPFYVPASYVEVY   63 (101)
Q Consensus        37 ~~~~~Ww~~~~~~-g~~G~vP~~yv~~~   63 (101)
                      ..+++||+++... |.+|++|++||...
T Consensus        14 ~~~~~ww~~~~~~~~~~g~~P~~~v~~~   41 (463)
T 3cxl_A           14 LYFQGVWKSYLYQLQQEAPHPRRITCTC   41 (463)
T ss_dssp             ----CCSCCHHHHHHHHSCCCEECCCCC
T ss_pred             CCCCCEEEEEecCcCccCCCCcCccCCc
Confidence            3457899998744 47899999999753

>3h41_A NLP/P60 family protein; NLPC/P60 family protein, structural genomics, joint center F structural genomics, JCSG; HET: DGL PG4; 1.79A {Bacillus cereus atcc 10987}

Probab=84.06  E-value=1.3  Score=30.97  Aligned_cols=37  Identities=22%  Similarity=0.493  Sum_probs=29.8

Q ss_pred             cccCCCEEEEEEcCCCCceEEEc--------CCCcEEEEcCCceEe
Q psy6758          25 RIQEGEKLFLIKKTNKDWWQVIR--------SSGKPFYVPASYVEV   62 (101)
Q Consensus        25 s~~~g~~l~vl~~~~~~Ww~~~~--------~~g~~G~vP~~yv~~   62 (101)
                      .+..|+.+.|+++. .+|.+++.        .+|..||||..++..
T Consensus        63 qll~Ge~V~Vl~~~-~~W~~V~~~~q~~~~~~dGy~GWV~~~~L~~  107 (311)
T 3h41_A           63 QALLGQEVTVVDKK-GDWVKVLVHGQPTPRNEEGYPGWMPEKQLTY  107 (311)
T ss_dssp             EEETTCEEEEEEEE-TTEEEEEETTCCBTTBSSCEEEEEEGGGEEC
T ss_pred             eecCCCEEEEEEee-CCEEEEEECCcccccCCCCcEEEEEHHHcCc
Confidence            34569999999974 68999983        467889999999874

>3h8z_A FragIle X mental retardation syndrome-related Pro; tudor domains, FXR2, structura genomics, structural genomics consortium, SGC; 1.92A {Homo sapiens} PDB: 3o8v_A 3kuf_A 2bkd_N*

Probab=83.85  E-value=0.81  Score=28.33  Aligned_cols=25  Identities=24%  Similarity=0.606  Sum_probs=19.0

Q ss_pred             CccccCCCEEEEEEcCCC----CceEEEc
Q psy6758          23 YVRIQEGEKLFLIKKTNK----DWWQVIR   47 (101)
Q Consensus        23 eLs~~~g~~l~vl~~~~~----~Ww~~~~   47 (101)
                      ...|..|+.+.+..+.++    +||.++.
T Consensus        58 ~~~f~~gd~VEV~~~~~d~ep~gWw~a~I   86 (128)
T 3h8z_A           58 NKEITEGDEVEVYSRANEQEPCGWWLARV   86 (128)
T ss_dssp             --CCCTTCEEEEEECC---CCCEEEEEEE
T ss_pred             ccCCCCCCEEEEEecCCCCCcCccEEEEE
Confidence            467899999999998765    8999986

>3m1u_A Putative gamma-D-glutamyl-L-diamino acid endopept; structural genomics, joint center for structural genomics; HET: MSE MES; 1.75A {Desulfovibrio vulgaris}

Probab=80.90  E-value=2.7  Score=31.00  Aligned_cols=39  Identities=18%  Similarity=0.283  Sum_probs=31.4

Q ss_pred             cccCCCEEEEEEc-CCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758          25 RIQEGEKLFLIKK-TNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus        25 s~~~g~~l~vl~~-~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      .+-.|+.+.|++. .+.+|.+++. ..-.||||...+....
T Consensus       155 qlL~GepV~Vle~S~d~~W~~Vq~-~~Y~GWV~~~~La~~~  194 (434)
T 3m1u_A          155 AVWMGTPVFVGHATADRAWLYVET-AFAAGWMPAADVARVD  194 (434)
T ss_dssp             EECTTCEEEEEEECTTSSEEEEEC-SSCEEEEEGGGEEECC
T ss_pred             hhccCcEEEEEEEcCCCCEEEEEE-CCEEEcCcHHHccccC
Confidence            4568999999995 3678999987 4588999999887653

>3npf_A Putative dipeptidyl-peptidase VI; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: CSA GOL; 1.72A {Bacteroides ovatus} PDB: 3pvq_A

Probab=80.27  E-value=2.8  Score=28.97  Aligned_cols=41  Identities=17%  Similarity=0.242  Sum_probs=33.6

Q ss_pred             CccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758          23 YVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus        23 eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      -..+..|..+.++... .+|++++..+|..||++..++....
T Consensus       106 ~~~l~~Gt~v~v~~~~-~~W~kV~~pdG~~GyV~~~~l~~~~  146 (306)
T 3npf_A          106 VSDVVAGNRLKWEGSK-GHFYQVSYPDGRKAYLSKSISQPEA  146 (306)
T ss_dssp             EEEEETTCEEEEEEEE-TTEEEEECTTSCEEEEETTSEEEHH
T ss_pred             EEEEcCCCEEEEEeec-CCEEEEEcCCCCeEEEEeeccceee
Confidence            4577899999998754 5799988768899999999998654

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	101
d1ckaa_	57	b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse	2e-09
d1gl5a_	67	b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musc	4e-09
d1ugva_	72	b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA062	4e-09
d1awwa_	67	b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Hom	6e-09
d2hspa_	71	b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (	1e-08
d1ujya_	76	b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens	3e-08
d1udla_	98	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	5e-08
d1utia_	57	b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona	5e-08
d1k9aa1	71	b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (cs	5e-08
d1gcqa_	56	b.34.2.1 (A:) Growth factor receptor-bound protein	5e-08
d2rn8a1	53	b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus	6e-08
d1jo8a_	58	b.34.2.1 (A:) Actin binding protein ABP1 {Baker's	7e-08
d2iima1	62	b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 d	8e-08
d1sema_	58	b.34.2.1 (A:) Growth factor receptor-bound protein	9e-08
d1uj0a_	58	b.34.2.1 (A:) Signal transducing adaptor molecule	1e-07
d1u06a1	55	b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chic	1e-07
d1fmka1	64	b.34.2.1 (A:82-145) c-src protein tyrosine kinase	2e-07
d1wfwa_	74	b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [Ta	2e-07
d1ng2a2	118	b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic	2e-07
d1arka_	60	b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo	2e-07
d1spka_	72	b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RI	2e-07
d1u5sa1	71	b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [Tax	3e-07
d1k4us_	62	b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId	3e-07
d2v1ra1	67	b.34.2.1 (A:10-76) Peroxisomal membrane protein Pe	4e-07
d1oota_	58	b.34.2.1 (A:) Hypothetical protein YFR024c {Baker'	4e-07
d1gria1	56	b.34.2.1 (A:1-56) Growth factor receptor-bound pro	4e-07
d1qcfa1	65	b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Hu	5e-07
d1opka1	57	b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domai	6e-07
d1efna_	57	b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase,	2e-06
d1uffa_	93	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	2e-06
d1ue9a_	80	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	3e-06
d1zuua1	56	b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyc	3e-06
d1uhca_	79	b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIA	4e-06
d1i07a_	59	b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus	6e-06
d1ng2a1	58	b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic	8e-06
d1uhfa_	69	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-05
d1j3ta_	74	b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Hom	1e-05
d1ycsb2	63	b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [	2e-05
d1gcqc_	69	b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mu	6e-05
d1wlpb1	53	b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic	2e-04
d1wiea_	96	b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human	5e-04
d1kjwa1	96	b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicu	7e-04
d1t0ha_	96	b.34.2.1 (A:) SH3-like domain of the L-type calciu	7e-04
d1bb9a_	83	b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicu	0.003

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 47.0 bits (112), Expect = 2e-09
 Identities = 16/55 (29%), Positives = 29/55 (52%), Gaps = 2/55 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          + L+DF+ + ++   +  ++G+ L +  K  + WW    S GK   +P  YVE Y
Sbjct: 5  RALFDFNGNDEED--LPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEKY 57

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.7 bits (111), Expect = 4e-09
 Identities = 14/61 (22%), Positives = 31/61 (50%), Gaps = 2/61 (3%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKL 66
           +  +YDF  +      +R++ G++  +++K +  WW+     G   Y+P++YV   K  
Sbjct: 4  IVVAMYDFQATEAHD--LRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKSN 61

Query: 67 S 67
          +
Sbjct: 62 N 62

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.8 bits (111), Expect = 4e-09
 Identities = 13/61 (21%), Positives = 21/61 (34%), Gaps = 2/61 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
          K LY           +    G     +  + +  W     +GK   +P +YVE     S+
Sbjct: 14 KALYACKAEHDS--ELSFTAGTVFDNVHPSQEPGWLEGTLNGKTGLIPENYVEFLSGPSS 71

Query: 69 G 69
          G
Sbjct: 72 G 72

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 46.3 bits (110), Expect = 6e-09
 Identities = 13/53 (24%), Positives = 33/53 (62%), Gaps = 2/53 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
            LYD+     +   +++++G++ F+++++N  WW+    +G+  Y+P++YV 
Sbjct: 12 VALYDYMPMNAND--LQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVT 62

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.6 bits (108), Expect = 1e-08
 Identities = 12/56 (21%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          K L+D+    +D   +   +   +  ++K    WW+      K  + P++YVE   
Sbjct: 10 KALFDYKAQREDE--LTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMV 63

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]} Length = 76

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (105), Expect = 3e-08
 Identities = 11/61 (18%), Positives = 31/61 (50%), Gaps = 3/61 (4%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
            + +K  ++F  + +D   + + +G+ +++ +     WW+    +G+  + P++YV   
Sbjct: 9  HQLIVKARFNFKQTNEDE--LSVCKGDIIYVTRVEEGGWWEG-TLNGRTGWFPSNYVREI 65

Query: 64 K 64
          K
Sbjct: 66 K 66

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 98

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (105), Expect = 5e-08
 Identities = 14/59 (23%), Positives = 30/59 (50%), Gaps = 3/59 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLS 67
            +YD+  + +D   +   +G+ + ++ K + DWWQ    +G     P++YV++    S
Sbjct: 38 IAMYDYAANNEDE--LSFSKGQLINVMNKDDPDWWQG-EINGVTGLFPSNYVKMTTDSS 93

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.5 bits (103), Expect = 5e-08
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          + LYDF+   +D   +  + GE + ++  +N  WW   R   K    PA+YV  
Sbjct: 5  RALYDFEALEEDE--LGFRSGEVVEVLDSSNPSWWTG-RLHNKLGLFPANYVAP 55

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (104), Expect = 5e-08
 Identities = 12/65 (18%), Positives = 30/65 (46%), Gaps = 3/65 (4%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYK 64
                Y+F  + +    +   +G+ L ++  T + +W++     G+   +PA+YV+  +
Sbjct: 7  TECIAKYNFHGTAEQD--LPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKRE 64

Query: 65 KLSNG 69
           +  G
Sbjct: 65 GVKAG 69

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (103), Expect = 5e-08
 Identities = 11/53 (20%), Positives = 25/53 (47%), Gaps = 3/53 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          + L+DFD        +  + G+ + ++  ++ +WW+     G+    P +YV 
Sbjct: 5  QALFDFDPQEDGE--LGFRRGDFIHVMDNSDPNWWKG-ACHGQTGMFPRNYVT 54

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

 Score = 43.3 bits (102), Expect = 6e-08
 Identities = 13/53 (24%), Positives = 26/53 (49%), Gaps = 2/53 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
            LYD+  +      + ++  E+ +L+  +   WW+V   +G   Y P+SY+ 
Sbjct: 2  IALYDYQTNDPQE--LALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLV 52

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 43.2 bits (102), Expect = 7e-08
 Identities = 13/55 (23%), Positives = 25/55 (45%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEV 62
             YD+D +  +   +   E +K+  I+  + DWW   +   G     P++YV +
Sbjct: 4  TAEYDYDAAEDNE--LTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSL 56

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.3 bits (102), Expect = 8e-08
 Identities = 12/59 (20%), Positives = 33/59 (55%), Gaps = 2/59 (3%)

Query: 3  LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          LQD  +  L+ ++ S      +  ++GE+L +++++ + W     ++G+  ++P ++V 
Sbjct: 4  LQDNLVIALHSYEPSHDGD--LGFEKGEQLRILEQSGEWWKAQSLTTGQEGFIPFNFVA 60

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

 Score = 43.1 bits (102), Expect = 9e-08
 Identities = 13/55 (23%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          + L+DF+        +  + G+ + LI K + +WW+  + + +    P++YV  Y
Sbjct: 6  QALFDFNPQESGE--LAFKRGDVITLINKDDPNWWEG-QLNNRRGIFPSNYVCPY 57

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.7 bits (101), Expect = 1e-07
 Identities = 11/53 (20%), Positives = 26/53 (49%), Gaps = 3/53 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          + LYDF+    +   +  + GE + ++  ++ +WWQ   +       P+++V 
Sbjct: 6  RALYDFEAVEDNE--LTFKHGELITVLDDSDANWWQG-ENHRGTGLFPSNFVT 55

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]} Length = 55

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 42.4 bits (100), Expect = 1e-07
 Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 3/54 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
            LYD+   +     V +++G+ L L+  TNKDWW+V   + +  +VPA+YV+ 
Sbjct: 4  LALYDYQEKSPRE--VTMKKGDILTLLNSTNKDWWKV-EVNDRQGFVPAAYVKK 54

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]} Length = 64

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.5 bits (100), Expect = 2e-07
 Identities = 18/61 (29%), Positives = 33/61 (54%), Gaps = 3/61 (4%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK 65
          T   LYD++  T+    +  ++GE+L ++  T  DWW     S+G+  Y+P++YV     
Sbjct: 4  TFVALYDYESRTETD--LSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS 61

Query: 66 L 66
          +
Sbjct: 62 I 62

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.8 bits (100), Expect = 2e-07
 Identities = 12/68 (17%), Positives = 30/68 (44%), Gaps = 7/68 (10%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-----SSGKPFYVPASYVE 61
          T+ V+ D+    ++   + + +GE + ++    ++   V +     S     +VP S + 
Sbjct: 9  TMTVIKDYYALKEN--EICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILA 66

Query: 62 VYKKLSNG 69
           +   S+G
Sbjct: 67 PFSGPSSG 74

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 118

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (102), Expect = 2e-07
 Identities = 14/78 (17%), Positives = 29/78 (37%), Gaps = 3/78 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKKLSN 68
            +  +     D   V + EGE + +I K    WW + R      Y P+ Y++   +  +
Sbjct: 18 VAIKAYTAVEGDE--VSLLEGEAVEVIHKLLDGWWVI-RKDDVTGYFPSMYLQKSGQDVS 74

Query: 69 GNRNNVENINPTMEKTRS 86
            +  ++   P    +  
Sbjct: 75 QAQRQIKRGAPPRRSSIR 92

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]} Length = 60

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (99), Expect = 2e-07
 Identities = 12/55 (21%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQ-VIRSSGKPFYVPASYVEV 62
          + +YD+  +  D   V  ++G+ +  ++  ++ W    ++ +G+   +PA+YVE 
Sbjct: 7  RAMYDYMAADADE--VSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEA 59

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]} Length = 72

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.1 bits (99), Expect = 2e-07
 Identities = 11/63 (17%), Positives = 27/63 (42%), Gaps = 3/63 (4%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--WWQVIRSSGKPFYVPASYVEVYKKL 66
          K ++    +  +   +   +G+ L L+    KD   +    ++    + P+SY ++    
Sbjct: 11 KTIFPHT-AGNNKTLLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSGP 69

Query: 67 SNG 69
          S+G
Sbjct: 70 SSG 72

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]} Length = 71

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (99), Expect = 3e-07
 Identities = 16/58 (27%), Positives = 31/58 (53%), Gaps = 4/58 (6%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEV 62
           ++ LY F   T++   +  ++GE + +I+K     +WW+   + G+   VP +YV V
Sbjct: 8  VVQTLYPFSSVTEE--ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVV 63

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]} Length = 62

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 3e-07
 Identities = 13/53 (24%), Positives = 28/53 (52%), Gaps = 3/53 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
          + L+ ++ +  +   +  QEG+ + ++ K N++W +   S GK    P  +VE
Sbjct: 9  EALFSYEATQPED--LEFQEGDIILVLSKVNEEWLEG-ESKGKVGIFPKVFVE 58

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 67

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.8 bits (98), Expect = 4e-07
 Identities = 16/59 (27%), Positives = 33/59 (55%), Gaps = 6/59 (10%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-----NKDWWQVIRSSGKPFYVPASYVEV 62
          + LYDF     + + V +++G+ + ++ K      + DWW+V   +G   Y+P +Y+E+
Sbjct: 9  RALYDFVPENPEME-VALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEI 66

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 41.3 bits (97), Expect = 4e-07
 Identities = 14/55 (25%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEV 62
            LY F         +  ++G+ + ++KK++  + W   R +G+    PA+YVE+
Sbjct: 5  VALYSFAGEESGD--LPFRKGDVITILKKSDSQNDWWTGRVNGREGIFPANYVEL 57

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 4e-07
 Identities = 12/54 (22%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
             YDF  +  D   +  + G+ L ++ +     W     +GK  ++P +Y+E+
Sbjct: 4  IAKYDFKATADD--ELSFKRGDILKVLNEECDQNWYKAELNGKDGFIPKNYIEM 55

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]} Length = 65

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.3 bits (97), Expect = 5e-07
 Identities = 12/61 (19%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 6  VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK 65
          + +  LYD++    +   +  Q+G+++ +++++ + W     ++ K  Y+P++YV     
Sbjct: 5  IIVVALYDYEAIHHED--LSFQKGDQMVVLEESGEWWKARSLATRKEGYIPSNYVARVDS 62

Query: 66 L 66
          L
Sbjct: 63 L 63

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.9 bits (96), Expect = 6e-07
 Identities = 14/52 (26%), Positives = 26/52 (50%), Gaps = 2/52 (3%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           LYDF  S  +   + I +GEKL ++   +   W   ++     +VP++Y+ 
Sbjct: 5  ALYDFVASGDNT--LSITKGEKLRVLGYNHNGEWCEAQTKNGQGWVPSNYIT 54

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]} Length = 57

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 2e-06
 Identities = 16/53 (30%), Positives = 31/53 (58%), Gaps = 3/53 (5%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVE 61
           LYD++  T+D   +   +GEK  ++  +  DWW+    ++G+  Y+P++YV 
Sbjct: 5  ALYDYEAITEDD--LSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVA 55

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 93

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (93), Expect = 2e-06
 Identities = 13/55 (23%), Positives = 23/55 (41%), Gaps = 3/55 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-KDWWQVIRSSGKPFYVPASYVEV 62
          + LY F+    D   +    G+ + + +KT  +  W      G   + P +YVE 
Sbjct: 9  RALYPFEARNHDE--MSFNSGDIIQVDEKTVGEPGWLYGSFQGNFGWFPCNYVEK 61

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 80

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (92), Expect = 3e-06
 Identities = 13/63 (20%), Positives = 27/63 (42%), Gaps = 6/63 (9%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVI----RSSGKPFYVPASYVEVYK 64
          +V   +  S  +   + +  G+ + ++KK    WWQ          +  + PAS+V++  
Sbjct: 11 QVTSAYVASGSEQ--LSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLG 68

Query: 65 KLS 67
            S
Sbjct: 69 PSS 71

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 56

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.1 bits (91), Expect = 3e-06
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 4/56 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDW--WQVIRSSGKPFYVPASYVEV 62
          KVLY +     D   + I  G+K+ L+ +            ++G+   VP +Y+ +
Sbjct: 3  KVLYAYVQKDDD--EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI 56

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]} Length = 79

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (91), Expect = 4e-06
 Identities = 12/59 (20%), Positives = 26/59 (44%), Gaps = 5/59 (8%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVIRSSGKPFYVPASYVEVYK 64
            +Y F     +   + +   +KL +++    T    W +   +GK  YVP++Y+   +
Sbjct: 17 FAVYTFKARNPNE--LSVSANQKLKILEFKDVTGNTEWWLAEVNGKKGYVPSNYIRKTE 73

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 59

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.3 bits (89), Expect = 6e-06
 Identities = 12/56 (21%), Positives = 27/56 (48%), Gaps = 3/56 (5%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK 64
          K  YDF         + + + + L ++    + WW+V  +SG   +VP + +++ +
Sbjct: 5  KSKYDFVARNSSE--LSVMKDDVLEILDD-RRQWWKVRNASGDSGFVPNNILDIMR 57

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 58

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (88), Expect = 8e-06
 Identities = 11/56 (19%), Positives = 30/56 (53%), Gaps = 3/56 (5%)

Query: 7  TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
          T + + D++ ++     + +  G+ + +++K+   WW   +   K  ++PAS++E 
Sbjct: 4  TYRAIADYEKTSGSE--MALSTGDVVEVVEKSESGWWFC-QMKAKRGWIPASFLEP 56

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.8 bits (88), Expect = 1e-05
 Identities = 11/54 (20%), Positives = 23/54 (42%), Gaps = 4/54 (7%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV 62
            LY +         +   EGE++ + +K + +WW       +    P++YV+ 
Sbjct: 12 IALYPYSSVEPG--DLTFTEGEEILVTQK-DGEWWTG-SIGDRSGIFPSNYVKP 61

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]} Length = 74

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.9 bits (88), Expect = 1e-05
 Identities = 8/66 (12%), Positives = 29/66 (43%), Gaps = 4/66 (6%)

Query: 4  QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY 63
          +++  + L  +     +  ++   + + + ++++    W+  +   G   + P SYV++ 
Sbjct: 9  ENLKAQALCSWTAKKDN--HLNFSKHDIITVLEQQENWWFGEVH--GGRGWFPKSYVKII 64

Query: 64 KKLSNG 69
              +G
Sbjct: 65 PGSESG 70

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 63

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 2e-05
 Identities = 15/58 (25%), Positives = 31/58 (53%), Gaps = 6/58 (10%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD---WWQVIRSSGKPFYVPASYVEVY 63
            L+D++    D   + ++EG+ + +I + ++D   WW   R + K  YVP + + +Y
Sbjct: 8  YALWDYEPQNDDE--LPMKEGDCMTIIHREDEDEIEWWWA-RLNDKEGYVPRNLLGLY 62

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]} Length = 69

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.0 bits (83), Expect = 6e-05
 Identities = 10/63 (15%), Positives = 25/63 (39%), Gaps = 6/63 (9%)

Query: 7  TLKVLYDF----DYSTKDGKYVRIQEGEKLFLIKKTNKDWWQV--IRSSGKPFYVPASYV 60
           ++V  ++          G ++R+  G+ + L K   +  W      ++ +  + P + V
Sbjct: 6  KMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRV 65

Query: 61 EVY 63
            Y
Sbjct: 66 HPY 68

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (79), Expect = 2e-04
 Identities = 13/52 (25%), Positives = 22/52 (42%), Gaps = 3/52 (5%)

Query: 10 VLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE 61
           +  +     D   V + EGE + +I K    WW + R      Y P+ Y++
Sbjct: 5  AIKAYTAVEGDE--VSLLEGEAVEVIHKLLDGWWVI-RKDDVTGYFPSMYLQ 53

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 5e-04
 Identities = 8/59 (13%), Positives = 25/59 (42%), Gaps = 5/59 (8%)

Query: 9  KVLYDFDYSTKDGKY----VRIQEGEKLFLIKKTNKDW-WQVIRSSGKPFYVPASYVEV 62
             Y ++      +     + +  G+ L++    ++D  ++     G+   VP+++V+ 
Sbjct: 21 VARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDF 79

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 33.9 bits (77), Expect = 7e-04
 Identities = 13/67 (19%), Positives = 30/67 (44%), Gaps = 8/67 (11%)

Query: 9  KVLYDFDYSTKDGKYVR---IQEGEKLFLIKKTNKDWWQVIR-----SSGKPFYVPASYV 60
          + L+D+D +   G   +    + G+ L +I   +++WWQ  R      +    ++P+   
Sbjct: 5  RALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRR 64

Query: 61 EVYKKLS 67
             ++ S
Sbjct: 65 VERREWS 71

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]} Length = 96

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

 Score = 33.8 bits (77), Expect = 7e-04
 Identities = 11/73 (15%), Positives = 30/73 (41%), Gaps = 7/73 (9%)

Query: 6  VTLKVLYDFDYSTKD-----GKYVRIQEGEKLFLIKKTNKDWWQ--VIRSSGKPFYVPAS 58
            ++    +  + +D     G  +  +  + L + +K N DWW   +++   +  ++P+ 
Sbjct: 22 FAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSP 81

Query: 59 YVEVYKKLSNGNR 71
                +L +  R
Sbjct: 82 VKLENMRLQHEQR 94

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 83

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 31.9 bits (72), Expect = 0.003
 Identities = 9/70 (12%), Positives = 24/70 (34%), Gaps = 16/70 (22%)

Query: 9  KVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKD--------------WWQVIRSSGKPFY 54
          +  +D+  +  D   ++++ G+ + +I   N +              W Q          
Sbjct: 16 QAQHDYTATDTD--ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGV 73

Query: 55 VPASYVEVYK 64
           P ++ E  +
Sbjct: 74 FPENFTERVQ 83

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	101
d1gcqa_	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.81
d2rn8a1	53	Bruton's tyrosine kinase {Mus musculus [TaxId: 100	99.81
d1ckaa_	57	C-Crk, N-terminal SH3 domain {Mouse (Mus musculus)	99.81
d1utia_	57	Grb2-related adaptor protein 2 (Mona/Gads) {Mouse	99.8
d1k4us_	62	p67phox {Human (Homo sapiens) [TaxId: 9606]}	99.79
d1gl5a_	67	tyrosine kinase tec {Mouse (Mus musculus) [TaxId:	99.79
d1sema_	58	Growth factor receptor-bound protein 2 (GRB2), N-	99.79
d1u06a1	55	alpha-Spectrin, SH3 domain {Chicken (Gallus gallus	99.78
d1jo8a_	58	Actin binding protein ABP1 {Baker's yeast (Sacchar	99.78
d1i07a_	59	EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 1009	99.78
d1uj0a_	58	Signal transducing adaptor molecule Stam2 {Mouse (	99.78
d1k9aa1	71	Carboxyl-terminal src kinase (csk) {Human (Homo sa	99.77
d1u5sa1	71	Nck-2 {Human (Homo sapiens) [TaxId: 9606]}	99.76
d1ujya_	76	Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606	99.75
d1ycsb2	63	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.75
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.75
d1arka_	60	SH3 domain from nebulin {Human (Homo sapiens) [Tax	99.75
d1wlpb1	53	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.75
d1efna_	57	Fyn proto-oncogene tyrosine kinase, SH3 domain {Hu	99.75
d2v1ra1	67	Peroxisomal membrane protein Pex13p {Baker's yeast	99.75
d1ng2a1	58	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.74
d1ue9a_	80	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.74
d1awwa_	67	Bruton's tyrosine kinase {Human (Homo sapiens) [Ta	99.74
d1j3ta_	74	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.74
d1wfwa_	74	Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}	99.74
d1fmka1	64	c-src protein tyrosine kinase {Human (Homo sapiens	99.73
d1oota_	58	Hypothetical protein YFR024c {Baker's yeast (Sacch	99.73
d1opka1	57	Abl tyrosine kinase, SH3 domain {Mouse (Mus muscul	99.72
d1gria1	56	Growth factor receptor-bound protein 2 (GRB2), N-	99.72
d1ng2a2	118	p47pox (neutrophil cytosolic factor 1) {Human (Hom	99.71
d1ug1a_	92	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.71
d1uhfa_	69	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.71
d1ugva_	72	Olygophrenin-1 like protein (KIAA0621) {Human (Hom	99.71
d2hspa_	71	Phospholipase C, SH3 domain {Human (Homo sapiens)	99.7
d1uhca_	79	Hypothetical protein Baa76854.1 (KIAA1010) {Human	99.7
d1kjwa1	96	Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}	99.7
d1uffa_	93	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	99.69
d1zuua1	56	BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [Ta	99.69
d1qcfa1	65	Hemapoetic cell kinase Hck {Human (Homo sapiens) [	99.69
d1spka_	72	BAI1-associated protein 2-like 1 (RIKEN cDNA 13000	99.69
d2iima1	62	p56-lck tyrosine kinase, SH3 domain {Human (Homo s	99.68
d1phta_	83	Phosphatidylinositol 3-kinase (p85-alpha subunit,	99.67
d1wiea_	96	RIM binding protein 2, RIMBP2 {Human (Homo sapiens	99.66
d1t0ha_	96	SH3-like domain of the L-type calcium channel {Rab	99.64
d1bb9a_	83	Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 101	99.62
d1i1ja_	106	Melanoma inhibitory activity protein {Human (Homo	99.61
d1gcqc_	69	Vav N-terminal SH3 domain {Mouse (Mus musculus) [T	99.59
d1vyva1	145	SH3-like domain of the L-type calcium channel {Rat	99.53
d1vyua1	136	SH3-like domain of the L-type calcium channel {Rat	99.43
d1ri9a_	77	Fyn-binding protein (T-cell adapter protein adap)	97.99
d1udla_	98	Intersectin 2 (KIAA1256) {Human (Homo sapiens) [Ta	90.64

>d1gcqa_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.81  E-value=4.4e-20  Score=100.25  Aligned_cols=55  Identities=20%  Similarity=0.532  Sum_probs=50.6

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .+|+|||+|.++.++  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+++
T Consensus         2 tyv~Alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~v   56 (56)
T d1gcqa_           2 TYVQALFDFDPQEDG--ELGFRRGDFIHVMDNSDPNWWKGAC-HGQTGMFPRNYVTPV   56 (56)
T ss_dssp             EEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEEECcCCCcCCcC--CcCCCCCCEEEEEEecCCCEEEEEE-CCeEEEEEHhHEEEC
Confidence            578999999998777  9999999999999998889999997 799999999999864

>d2rn8a1 b.34.2.1 (A:176-228) Bruton's tyrosine kinase {Mus musculus [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Mus musculus [TaxId: 10090]

Probab=99.81  E-value=2.6e-20  Score=100.15  Aligned_cols=53  Identities=25%  Similarity=0.615  Sum_probs=48.8

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      |+|||+|.++.++  +|+|++||.+.|+++.+++||.+++.+|+.|+||+|||++
T Consensus         1 V~Alydy~a~~~~--eLs~~~Gd~~~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~e   53 (53)
T d2rn8a1           1 VIALYDYQTNDPQ--ELALRCDEEYYLLDSSEIHWWRVQDKNGHEGYAPSSYLVE   53 (53)
T ss_dssp             EEESSCCCCSSTT--BCCCCTTCEEEECCCSCSSCEEEECTTSCEEEECGGGEEE
T ss_pred             CEEeeeECCCCCC--eeeECCCCEEEEeEEcCCCeEEEEeCCCCEEEEeHHHEeC
Confidence            6899999988777  9999999999999998899999998788999999999974

>d1ckaa_ b.34.2.1 (A:) C-Crk, N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: C-Crk, N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.81  E-value=4.4e-20  Score=100.58  Aligned_cols=54  Identities=28%  Similarity=0.617  Sum_probs=50.4

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      +++|||||+++.++  +|+|++||+|.|+++.+++||.++..+|+.|+||++||++
T Consensus         3 ~v~Alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yve~   56 (57)
T d1ckaa_           3 YVRALFDFNGNDEE--DLPFKKGDILRIRDKPEEQWWNAEDSEGKRGMIPVPYVEK   56 (57)
T ss_dssp             EEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEECTTSCEEEEEGGGEEC
T ss_pred             EEEECCCCCcCCcC--CcCCCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEE
Confidence            68999999988777  9999999999999999899999998788999999999985

>d1utia_ b.34.2.1 (A:) Grb2-related adaptor protein 2 (Mona/Gads) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Grb2-related adaptor protein 2 (Mona/Gads)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.80  E-value=7.3e-20  Score=99.70  Aligned_cols=54  Identities=28%  Similarity=0.495  Sum_probs=50.0

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      +|+|||+|.++.++  +|+|.+||.|.|++..+++||.++. +|+.|+||++||+++
T Consensus         3 yarAlydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~g~~-~g~~G~~P~~yve~i   56 (57)
T d1utia_           3 WARALYDFEALEED--ELGFRSGEVVEVLDSSNPSWWTGRL-HNKLGLFPANYVAPM   56 (57)
T ss_dssp             EEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEECcCCCCCCcC--CcCCCCCCEEEEeEEcCCCEEEEEE-CCcEEEEEHHHEEEc
Confidence            68999999988777  9999999999999998889999997 799999999999874

>d1k4us_ b.34.2.1 (S:) p67phox {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p67phox
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.79  E-value=7.1e-20  Score=101.31  Aligned_cols=58  Identities=21%  Similarity=0.468  Sum_probs=52.1

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEecc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      .+..++|||+|++..++  +|+|++||+|.|++..+++||.++. +|+.|+||++||++..
T Consensus         4 ~g~~v~Aly~y~a~~~~--eLsf~~Gd~i~vl~~~~~~Ww~g~~-~g~~G~~P~~yVe~~~   61 (62)
T d1k4us_           4 KGSQVEALFSYEATQPE--DLEFQEGDIILVLSKVNEEWLEGES-KGKVGIFPKVFVEDSA   61 (62)
T ss_dssp             CCEEEECCSCBCCCSSS--BCCBCSSCEEEEEEESSSSCEEEEC-SSCEEEECGGGCCCSC
T ss_pred             CCCEEEECCCCCCCCcC--CcCCCCCCEEEEeEEcCCCEEEEEE-CCcEEEEchHHeEECC
Confidence            45678999999998777  9999999999999999899999986 8999999999998653

>d1gl5a_ b.34.2.1 (A:) tyrosine kinase tec {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: tyrosine kinase tec
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.79  E-value=1.2e-19  Score=101.75  Aligned_cols=58  Identities=24%  Similarity=0.611  Sum_probs=52.5

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|||+|.++..+  +|+|++||+|.|+.+.+.+||.++..+|+.|+||++||+.+..
T Consensus         3 ~~v~Alydf~a~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~~P~~yV~~~~~   60 (67)
T d1gl5a_           3 EIVVAMYDFQATEAH--DLRLERGQEYIILEKNDLHWWRARDKYGSEGYIPSNYVTGKKS   60 (67)
T ss_dssp             SCEEECSCBCCSSSS--BCCBCTTCEEEEEECSSSSEEEEECSSSCEEEEETTSEESSTT
T ss_pred             EEEEECCCCCCCCcC--CcCCCCCCEEEEEEecCCCcEEEEECCCCEEEEEhHHeEEecC
Confidence            468999999998777  9999999999999999889999998788999999999987654

>d1sema_ b.34.2.1 (A:) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Caenorhabditis elegans, SEM-5 [TaxId: 6239]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Caenorhabditis elegans, SEM-5 [TaxId: 6239]

Probab=99.79  E-value=1.4e-19  Score=98.89  Aligned_cols=55  Identities=24%  Similarity=0.539  Sum_probs=50.6

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .+|+|||+|.++.++  +|+|.+||+|.|+++.+++||.++. +|+.|+||++||+++
T Consensus         3 ~~~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yvep~   57 (58)
T d1sema_           3 KFVQALFDFNPQESG--ELAFKRGDVITLINKDDPNWWEGQL-NNRRGIFPSNYVCPY   57 (58)
T ss_dssp             CEEEESSCBCCSSTT--BCCBCTTCEEEEEECSSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEEECCCCCcCCcC--CcCCCCCCEEEEeEEcCCCEEEEEE-CCeEEEEEhhhEEEC
Confidence            478999999998777  9999999999999999899999997 789999999999864

>d1u06a1 b.34.2.1 (A:7-61) alpha-Spectrin, SH3 domain {Chicken (Gallus gallus) [TaxId: 9031]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: alpha-Spectrin, SH3 domain
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.78  E-value=2.2e-19  Score=97.08  Aligned_cols=54  Identities=35%  Similarity=0.696  Sum_probs=49.6

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .++|+|+|+++.++  +|+|++||.+.|+++.+++||.++. +|+.|+||+|||+.+
T Consensus         2 ~~vAl~dy~~~~~~--eLs~~~Gd~v~v~~~~~~~Ww~g~~-~g~~G~~P~~yv~~i   55 (55)
T d1u06a1           2 LVLALYDYQEKSPR--EVTMKKGDILTLLNSTNKDWWKVEV-NDRQGFVPAAYVKKL   55 (55)
T ss_dssp             EEEECSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             EEEECCCCCCCCcC--CccCCCCCEEEEeEEcCCCEEEEEE-CCeEEEEeHHHEEEC
Confidence            47899999998777  9999999999999999899999997 789999999999864

>d1jo8a_ b.34.2.1 (A:) Actin binding protein ABP1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Actin binding protein ABP1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.78  E-value=2e-19  Score=98.19  Aligned_cols=55  Identities=24%  Similarity=0.449  Sum_probs=49.9

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEec
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVY   63 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~   63 (101)
                      +|+|+|+|.++.++  +|+|++||.|.|+++.+++||.++. .+|+.|+||++||+.+
T Consensus         2 ~~~Alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~~P~~yVe~i   57 (58)
T d1jo8a_           2 WATAEYDYDAAEDN--ELTFVENDKIINIEFVDDDWWLGELEKDGSKGLFPSNYVSLG   57 (58)
T ss_dssp             CEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEETTTCCEEEEEGGGEEEC
T ss_pred             EEEEccCCCCCCcC--CcCCCCCCEEEEEEEcCCCEEEEEECCCCCEEEEchHHEEEc
Confidence            68999999988777  9999999999999999999999986 4579999999999865

>d1i07a_ b.34.2.1 (A:) EPS8 SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: EPS8 SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=2.1e-19  Score=98.44  Aligned_cols=57  Identities=21%  Similarity=0.510  Sum_probs=51.0

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+++|+|||.++..+  ||+|++||.|.|+++. ++||.+++.+|+.|+||+|||+.+.+
T Consensus         2 ~~a~alydf~a~~~~--ELs~~~Gd~i~v~~~~-~~ww~~~~~~g~~G~~P~nyve~i~~   58 (59)
T d1i07a_           2 KYAKSKYDFVARNSS--ELSVMKDDVLEILDDR-RQWWKVRNASGDSGFVPNNILDIMRT   58 (59)
T ss_dssp             CEEEESSCBCCSSTT--BCCBCTTCEEEECGGG-CCEEEEECTTSCEEEEEGGGEEEECC
T ss_pred             eEEEEccCCCCCCCC--eeeEcCCCEEEEEEEc-CCcEEEEEcCCCEEEECHHHeEECCC
Confidence            368999999998777  9999999999999875 57999998889999999999998764

>d1uj0a_ b.34.2.1 (A:) Signal transducing adaptor molecule Stam2 {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Signal transducing adaptor molecule Stam2
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.78  E-value=2.8e-19  Score=97.66  Aligned_cols=53  Identities=21%  Similarity=0.552  Sum_probs=49.0

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEe
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      .|+|+|+|.++.++  +|+|++||+|.|+++.+++||.++. +|+.|+||++||+.
T Consensus         4 r~~Alydy~~~~~~--eLsf~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yV~~   56 (58)
T d1uj0a_           4 RVRALYDFEAVEDN--ELTFKHGELITVLDDSDANWWQGEN-HRGTGLFPSNFVTT   56 (58)
T ss_dssp             EEEESSCBCCCSTT--BCCBCTTCEEEEEECCSSSEEEEEE-TTEEEEEEGGGEES
T ss_pred             EEEECCCCCCCCcC--CcCCCCCCEEEEeEEeCCCEEEEEE-CCeEEEEehHhEee
Confidence            58999999998777  9999999999999998889999997 79999999999973

>d1k9aa1 b.34.2.1 (A:6-76) Carboxyl-terminal src kinase (csk) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Carboxyl-terminal src kinase (csk)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.1e-18  Score=98.83  Aligned_cols=61  Identities=18%  Similarity=0.389  Sum_probs=52.6

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+..|+|||+|++..++  ||+|++||+|.|+.+. +.+||.++...|+.|+||++||+++..
T Consensus         4 p~g~~~~Alydy~a~~~~--ELs~~~Gd~i~vl~~~~~~~W~~~~~~~g~~G~~P~~yve~~~~   65 (71)
T d1k9aa1           4 PSGTECIAKYNFHGTAEQ--DLPFCKGDVLTIVAVTKDPNWYKAKNKVGREGIIPANYVQKREG   65 (71)
T ss_dssp             CTTCEEEESSCBCCSSSS--BCCBCTTCEEEEEEECSSTTEEEEECTTCCEEEEEGGGEEECCC
T ss_pred             CCCCEEEEccCCCCCCCC--CccCCCCCEEEEeEeccCCCEEEEEeCCCCEEEEchHHeEEccc
Confidence            456689999999998777  9999999999999875 557888988778999999999998654

>d1u5sa1 b.34.2.1 (A:1-71) Nck-2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Nck-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.76  E-value=1.2e-18  Score=98.68  Aligned_cols=57  Identities=28%  Similarity=0.621  Sum_probs=50.9

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCC--CCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~--~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .++|||+|.++.++  ||+|++||+|.|+++.+  ++||.+++.+|+.|+||++||+.+..
T Consensus         8 ~~~Alydf~~~~~~--eLs~~~Gd~i~vl~~~~~~~~Ww~~~~~~G~~G~vP~~yv~~~~~   66 (71)
T d1u5sa1           8 VVQTLYPFSSVTEE--ELNFEKGETMEVIEKPENDPEWWKCKNARGQVGLVPKNYVVVLSD   66 (71)
T ss_dssp             EEEESSCCCCCSSS--BCCCCSSCCEEEEECCCTTTCEEEEEETTTEEEEEETTSEEECCC
T ss_pred             EEEECccCCCCCCC--EeeECCCCEEEEEEcccCCCCeEEEEECCCCEEEEChHHEEECCC
Confidence            68999999998877  99999999999998753  47999998789999999999998764

>d1ujya_ b.34.2.1 (A:) Rac/CDC42 GEF 6 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Rac/CDC42 GEF 6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5.7e-19  Score=101.22  Aligned_cols=59  Identities=19%  Similarity=0.567  Sum_probs=53.0

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+.++|+|+|+++.++  ||+|++||+|.|+++.+++||.++. +|+.|+||++||+.+..
T Consensus         9 ~~~~~rAlydy~a~~~~--eLs~~~Gd~i~v~~~~~~~W~~g~~-~g~~G~~P~~yv~~i~~   67 (76)
T d1ujya_           9 HQLIVKARFNFKQTNED--ELSVCKGDIIYVTRVEEGGWWEGTL-NGRTGWFPSNYVREIKS   67 (76)
T ss_dssp             CCEEEECCSCBCCSSTT--SCCBCSSCCEEESSCCSSSCEEEEE-TTEEEEECTTTSEECCH
T ss_pred             CCEEEEECccCCCCCCC--CccCCCCCEEEEeEEcCCCEEEEEE-CCcEEEEchHHEEECCC
Confidence            45678999999998777  9999999999999998889999987 78999999999998654

>d1ycsb2 b.34.2.1 (B:457-519) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=9.3e-19  Score=97.02  Aligned_cols=55  Identities=24%  Similarity=0.599  Sum_probs=48.2

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCC---CCceEEEcCCCcEEEEcCCceEecc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN---KDWWQVIRSSGKPFYVPASYVEVYK   64 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~---~~Ww~~~~~~g~~G~vP~~yv~~~~   64 (101)
                      .|+|||+|+++.++  ||+|++||+|.|+++.+   .+||.++. +|+.|+||++||+.++
T Consensus         6 ~v~Alydy~a~~~~--ELs~~~Gd~i~vl~~~~~~~~gW~~g~~-~g~~G~~P~~yv~~~P   63 (63)
T d1ycsb2           6 VIYALWDYEPQNDD--ELPMKEGDCMTIIHREDEDEIEWWWARL-NDKEGYVPRNLLGLYP   63 (63)
T ss_dssp             EEEESSCBCCSSTT--BCCBCSSCEEEECCCCTTSCSSEEEEEE-TTEEEEEEGGGEECCC
T ss_pred             EEEEeeCCCCCCCC--CcCCCCCCEEEEEEecCCCCCCEEEEEE-CCeEEEEchHHhEeCc
Confidence            57899999998777  99999999999998753   36999997 8999999999998653

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=5e-19  Score=105.77  Aligned_cols=58  Identities=22%  Similarity=0.516  Sum_probs=52.4

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|||||+++.++  ||+|++||+|.|+++.+++||.++. +|+.|+||+|||+.+..
T Consensus        34 ~~~~~Alydy~a~~~~--ELsf~~Gd~i~Vl~~~~~gWw~g~~-~g~~G~~P~nyVe~~~~   91 (98)
T d1udla_          34 VCQVIAMYDYAANNED--ELSFSKGQLINVMNKDDPDWWQGEI-NGVTGLFPSNYVKMTTD   91 (98)
T ss_dssp             SEEEEESSCCCCSSTT--SCCCCTTCEEEECBCCSSSEEBCBS-SSCBCCEETTSEEECCC
T ss_pred             ccEEEEccCCCCCCCC--EeeEcCCCEEEEeEecCCCeEEEEE-CCeEEEEchHHEEECCC
Confidence            3568999999998777  9999999999999998899999985 89999999999988765

>d1arka_ b.34.2.1 (A:) SH3 domain from nebulin {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3 domain from nebulin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=4.5e-19  Score=97.42  Aligned_cols=57  Identities=21%  Similarity=0.491  Sum_probs=50.3

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcC-CCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRS-SGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~-~g~~G~vP~~yv~~~   63 (101)
                      +..++|+|+|+++.++  ||+|++||+|.|+.+.+++||.+++. +|+.|+||+|||+.+
T Consensus         3 G~~~rAl~df~~~~~~--eLs~~~Gd~i~v~~~~~~~W~~~~~~~~g~~G~vP~nyve~i   60 (60)
T d1arka_           3 GKIFRAMYDYMAADAD--EVSFKDGDAIINVQAIDEGWMYGTVQRTGRTGMLPANYVEAI   60 (60)
T ss_dssp             CCCEECCSCCCCSSSS--BCCCCTTCEECCSEECSSSEEEEECTTTCCEEEEETTTCEEC
T ss_pred             CcEEEECccCCCCCCC--CcCCCCCCEEEEEEEcCCCEEEEEECCCCCEEEEcHHHEEEC
Confidence            3467999999988776  99999999999999988899999874 579999999999864

>d1wlpb1 b.34.2.1 (B:229-281) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.7e-18  Score=92.12  Aligned_cols=51  Identities=24%  Similarity=0.483  Sum_probs=47.2

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceE
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVE   61 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~   61 (101)
                      .+|+|+|+++.++  +|+|.+||+|.|+++.+++||.++. +|+.|+||++||+
T Consensus         3 yval~~y~a~~~~--eLs~~~Gd~v~vl~~~~~gWw~g~~-~g~~G~~P~~yve   53 (53)
T d1wlpb1           3 YVAIKAYTAVEGD--EVSLLEGEAVEVIHKLLDGWWVIRK-DDVTGYFPSMYLQ   53 (53)
T ss_dssp             EEECSCBCCCSSS--BCCBCTTCEEEEEECCTTSSEEEES-SSCEEEECSTTEE
T ss_pred             EEEeeeECCCCCC--EecCCCCCEEEEEeecCCceEEEEE-CCcEeEecHHhCC
Confidence            4799999998877  9999999999999999899999996 7899999999985

>d1efna_ b.34.2.1 (A:) Fyn proto-oncogene tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn proto-oncogene tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.75  E-value=2.3e-18  Score=93.55  Aligned_cols=54  Identities=30%  Similarity=0.733  Sum_probs=48.4

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEec
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVY   63 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~   63 (101)
                      ++|+|+|+++.++  ||+|++||.|.|+++.+++||.++. .+|+.|+||+|||+++
T Consensus         3 ~vAl~dy~a~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~pv   57 (57)
T d1efna_           3 FVALYDYEAITED--DLSFHKGEKFQILNSSEGDWWEARSLTTGETGYIPSNYVAPV   57 (57)
T ss_dssp             EEESSCBCCSSTT--BCCBCTTCEEEEEECSSCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             EEECCCCCCCCcC--CcCCCCCCEEEEEEecCCCCEEEEECCCCCEEEEeHHHeEEC
Confidence            5799999998777  9999999999999999889999987 4579999999999863

>d2v1ra1 b.34.2.1 (A:10-76) Peroxisomal membrane protein Pex13p {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Peroxisomal membrane protein Pex13p
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.75  E-value=1.3e-18  Score=97.46  Aligned_cols=57  Identities=28%  Similarity=0.650  Sum_probs=48.5

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC-----CCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-----KDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~-----~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .+|+|||+|.++..+ .||+|++||+|.|+++.+     .+||.++..+|+.|+||+|||+.+
T Consensus         6 ~~~~Alydy~~~~~~-~ELs~~~Gd~i~vl~~~d~~~~~~~Ww~g~~~~G~~G~~P~nyve~i   67 (67)
T d2v1ra1           6 EFARALYDFVPENPE-MEVALKKGDLMAILSKKDPLGRDSDWWKVRTKNGNIGYIPYNYIEII   67 (67)
T ss_dssp             EEEEESSCBCCSSTT-TBCCBCTTCEEEEEEEECTTSCEEEEEEEECTTSCEEEEEGGGEEEC
T ss_pred             EEEEECccCCCCCCC-CEeCCCCCCEEEEEEeecCCCcCCCeEEEEeCCCCEEEEEHHHEEEC
Confidence            479999999886532 389999999999998753     479999987899999999999864

>d1ng2a1 b.34.2.1 (A:157-214) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=4.5e-19  Score=96.82  Aligned_cols=54  Identities=20%  Similarity=0.527  Sum_probs=49.5

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEec
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      +++|+|+|.++.++  +|+|++||+|.|+++.+++||.++. +|+.|+||++|++++
T Consensus         4 ~~~al~dy~~~~~~--eLs~~~Gd~i~vl~~~~~~Ww~~~~-~g~~G~~P~~yve~l   57 (58)
T d1ng2a1           4 TYRAIADYEKTSGS--EMALSTGDVVEVVEKSESGWWFCQM-KAKRGWIPASFLEPL   57 (58)
T ss_dssp             EEECSSCBCCSSTT--CCCBCTTCEEEEEECCTTSCCEEEE-CCCCCCCCGGGCCCS
T ss_pred             EEEECccCcCCCCC--CcCCCCCCEEEEEEecCCCeEEEEE-CCCCcEEcHhHEEEC
Confidence            57999999998777  9999999999999999999999997 789999999999764

>d1ue9a_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=6.1e-18  Score=97.58  Aligned_cols=60  Identities=20%  Similarity=0.361  Sum_probs=52.3

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc----CCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR----SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~----~~g~~G~vP~~yv~~~~~   65 (101)
                      ...+++|||+|+++.++  ||+|++||+|.|+++.+++||.++.    ..++.|+||++||+.+..
T Consensus         6 ~g~~~~al~~y~~~~~~--eLs~~~Gd~i~Vl~~~~~~Ww~g~~~~~~~~~~~G~~P~~yv~~~~~   69 (80)
T d1ue9a_           6 SGEIAQVTSAYVASGSE--QLSLAPGQLILILKKNTSGWWQGELQARGKKRQKGWFPASHVKLLGP   69 (80)
T ss_dssp             CCEEEEECSCCCCCSTT--BCCCCTTCEEEEEEECSSSEEEEEECSCCSSCCEEEEETTSEEECCS
T ss_pred             CCCEEEECcCCCCCCCC--EeeEcCCCEEEEEEEeCCCeEEEEEccCCCCCCEeEEEheeEEECCC
Confidence            45679999999998777  9999999999999998889999975    235789999999998765

>d1awwa_ b.34.2.1 (A:) Bruton's tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Bruton's tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.4e-19  Score=100.55  Aligned_cols=60  Identities=22%  Similarity=0.593  Sum_probs=52.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|+|+|+++.++  +|+|++||+|.|+++.+.+||.++..+|+.|+||++||+.+..
T Consensus         7 ~~~~v~Alydy~a~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   66 (67)
T d1awwa_           7 ELKKVVALYDYMPMNAN--DLQLRKGDEYFILEESNLPWWRARDKNGQEGYIPSNYVTEAED   66 (67)
T ss_dssp             CCCEEEBSSCCCCSSSS--SCCCCSSCEEECCCCCSSSEECCBCTTSCBCCEETTTBCCSCC
T ss_pred             CCEEEEECcCCCCCCcC--CcCCCCCCEEEEEEEcCCCeEEEEECCCCEEEEcHHHeEECcC
Confidence            33468999999998777  9999999999999998889999987788999999999987653

>d1j3ta_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.74  E-value=2.7e-18  Score=97.89  Aligned_cols=58  Identities=14%  Similarity=0.409  Sum_probs=51.6

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ....++|||+|.++.++  ||+|++||+|.|+++. ++||.++. +|+.|+||++||+.+..
T Consensus         9 ~~~~~~alydy~a~~~~--ELs~~~Gd~i~vl~~~-~~ww~g~~-~g~~G~fP~~yve~i~~   66 (74)
T d1j3ta_           9 ENLKAQALCSWTAKKDN--HLNFSKHDIITVLEQQ-ENWWFGEV-HGGRGWFPKSYVKIIPG   66 (74)
T ss_dssp             CCCEEEESSCBCCCSTT--BCCBCTTCEEEEEEEC-SSEEEEES-TTCCCEEEGGGEEECCC
T ss_pred             CCeEEEEccCCCCCCCC--EecCCCCCEEEEEEcc-CCeEEEEE-CCcEEEEchhhEEECCC
Confidence            45679999999998777  9999999999999985 68999987 89999999999998765

>d1wfwa_ b.34.2.1 (A:) Kalirin-9a {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Kalirin-9a
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.74  E-value=2.6e-18  Score=97.94  Aligned_cols=61  Identities=15%  Similarity=0.268  Sum_probs=52.7

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCC-----CcEEEEcCCceEecccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSS-----GKPFYVPASYVEVYKKL   66 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~-----g~~G~vP~~yv~~~~~~   66 (101)
                      ....++|||||.+..++  +|+|.+||+|.|+++.+.+||.+++..     |++||||++||+++...
T Consensus         6 ~g~~~~al~dy~~~~~~--eLs~~~Gd~i~vl~~~~~~Ww~v~~~~~~~~~g~~G~vP~~yve~~~~p   71 (74)
T d1wfwa_           6 SGSTMTVIKDYYALKEN--EICVSQGEVVQVLAVNQQNMCLVYQPASDHSPAAEGWVPGSILAPFSGP   71 (74)
T ss_dssp             CSCEEECCSCBCCCSSS--CCCBCTTCEEEEEEECTTSEEEEEECSCSSSSSEEEEEEGGGCCBCCST
T ss_pred             CCCEEEEeEEECCCCCC--CccCccCCEEEEEEEcCCCCEEEEeCccCCcCCeeeEEchHHeEECCCC
Confidence            45578999999988777  999999999999999888999998733     58999999999887653

>d1fmka1 b.34.2.1 (A:82-145) c-src protein tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: c-src protein tyrosine kinase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.73  E-value=3.3e-18  Score=94.96  Aligned_cols=57  Identities=32%  Similarity=0.701  Sum_probs=50.2

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+|+|+|+++.++  ||+|++||.|.|+++.+++||.+++ .+|+.||||++||++...
T Consensus         4 ~~vAlydf~~~~~~--eLs~~~Gd~i~v~~~~~~~Ww~~~~~~~g~~G~vP~~yv~~~~s   61 (64)
T d1fmka1           4 TFVALYDYESRTET--DLSFKKGERLQIVNNTEGDWWLAHSLSTGQTGYIPSNYVAPSDS   61 (64)
T ss_dssp             EEEESSCBCCCSSS--BCCBCTTCEEEESCCCSSSEEEEEETTTCCEEEEEGGGEEETTS
T ss_pred             EEEECccCCCcCcC--CcCCCCCCEEEEEEEcCCCcEEEEECCCCCEEEEehHHeEECcc
Confidence            46899999988777  9999999999999998889999987 457999999999987653

>d1oota_ b.34.2.1 (A:) Hypothetical protein YFR024c {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein YFR024c
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.73  E-value=4.5e-18  Score=92.75  Aligned_cols=55  Identities=27%  Similarity=0.564  Sum_probs=47.8

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC--CCceEEEcCCCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~--~~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      ..|+|+|+|.++.++  ||+|++||.|.|+.+.+  .+||.++. +|++|+||++||+.+
T Consensus         2 P~~~Alydy~a~~~~--ELs~~~Gd~v~vl~~~~~~~~W~~~~~-~g~~G~vP~~yve~i   58 (58)
T d1oota_           2 PKAVALYSFAGEESG--DLPFRKGDVITILKKSDSQNDWWTGRV-NGREGIFPANYVELV   58 (58)
T ss_dssp             CEEEESSCBCCCSTT--BCCBCTTCEEEEEECCSCTTSEEEEEE-TTEEEEEEGGGEEEC
T ss_pred             CeEEEccCCCCCCCC--CccCCCCCEEEEEEeecCCCCEEEEEE-CCcEEEEcHHHEEEC
Confidence            368999999998777  99999999999998864  36888876 889999999999864

>d1opka1 b.34.2.1 (A:83-139) Abl tyrosine kinase, SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Abl tyrosine kinase, SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.72  E-value=1.1e-17  Score=90.87  Aligned_cols=54  Identities=26%  Similarity=0.488  Sum_probs=46.2

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcCCC-CceEEEcCCCcEEEEcCCceEec
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEVY   63 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~-~Ww~~~~~~g~~G~vP~~yv~~~   63 (101)
                      .++|||+|+++.++  ||+|++||+|.|+.+.++ .||.++. +|++|+||++||+++
T Consensus         2 ~~vAlydy~a~~~~--eLs~~~Gd~i~vl~~~~~~~W~~~~~-~g~~G~~P~~yv~~v   56 (57)
T d1opka1           2 LFVALYDFVASGDN--TLSITKGEKLRVLGYNHNGEWCEAQT-KNGQGWVPSNYITPV   56 (57)
T ss_dssp             EEEESSCBCCCSTT--BCCBCTTCEEEEEEECTTSSEEEEEC-SSCEEEEEGGGEEES
T ss_pred             EEEECccCCCCCcC--CcCCCCCCEEEEeEecCCCCEEEEEE-CCCEeEEchhheEEC
Confidence            46899999998777  999999999999987655 4667775 788999999999864

>d1gria1 b.34.2.1 (A:1-56) Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Growth factor receptor-bound protein 2 (GRB2), N- and C-terminal domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.72  E-value=4.5e-18  Score=92.15  Aligned_cols=53  Identities=23%  Similarity=0.592  Sum_probs=42.1

Q ss_pred             EEEEEeccCCCCCCCCCccccCCCEEEEEEcC-CCCceEEEcCCCcEEEEcCCceEe
Q psy6758           7 TLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRSSGKPFYVPASYVEV   62 (101)
Q Consensus         7 ~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~~g~~G~vP~~yv~~   62 (101)
                      .|+|+|+|.++.++  ||+|++||.|.|+++. +++||.++. +|+.|+||+|||+.
T Consensus         2 ~a~Alydy~a~~~~--ELs~~~Gd~v~v~~~~~~~~W~~~~~-~g~~G~vP~nyvev   55 (56)
T d1gria1           2 EAIAKYDFKATADD--ELSFKRGDILKVLNEECDQNWYKAEL-NGKDGFIPKNYIEM   55 (56)
T ss_dssp             EEEECSCBCCCSSS--CCCBCTTCEEEC------CCEEEEES-SSCEEEEEGGGEEC
T ss_pred             EEEEeeCCCCCCCC--CcCCCCCCEEEEEeccCCCCeEEEEE-CCcEEEEehhhEEE
Confidence            58999999998777  9999999999998876 456777765 89999999999974

>d1ng2a2 b.34.2.1 (A:215-332) p47pox (neutrophil cytosolic factor 1) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p47pox (neutrophil cytosolic factor 1)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1e-17  Score=102.84  Aligned_cols=58  Identities=21%  Similarity=0.397  Sum_probs=52.1

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +..++|||+|.+...+  ||+|++||+|.|+++.+++||.|+. +|+.||||++||+.+..
T Consensus        14 g~~~~alydy~a~~~d--ELs~~~Gd~i~Vl~~~~~gWw~g~~-~g~~G~~P~~yv~~~~~   71 (118)
T d1ng2a2          14 GEPYVAIKAYTAVEGD--EVSLLEGEAVEVIHKLLDGWWVIRK-DDVTGYFPSMYLQKSGQ   71 (118)
T ss_dssp             CEEEEESSCBCCCSTT--BCCBCTTCEEEEEECCTTSEEEEEE-TTEEEEEEGGGEEETTS
T ss_pred             CcEEEECcCCCCCCCC--EecCCCCCEEEEeEecCCCeEEEEE-CCeEEEEehhhEEECCC
Confidence            3567899999998777  9999999999999998899999997 79999999999987643

>d1ug1a_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=1.3e-17  Score=98.57  Aligned_cols=58  Identities=19%  Similarity=0.333  Sum_probs=50.9

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC----CCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN----KDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~----~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|+|+|+++.++  ||+|++||+|.||++.+    .+||++++ +|++||||++||+.+.+
T Consensus        17 ~~~~~a~~~f~a~~~~--eLs~~~Gd~v~vl~~~d~~~~~~Ww~~~~-~g~~G~~P~~yv~~~~~   78 (92)
T d1ug1a_          17 EKLFQAERNFNAAQDL--DVSLLEGDLVGVIKKKDPMGSQNRWLIDN-GVTKGFVYSSFLKPYNP   78 (92)
T ss_dssp             GGEEEESSCCCCCSSS--CCCCCTTCEEEEEESCCTTSCSSEEEEEC-SSSEEEEEGGGEEECCC
T ss_pred             CeEEEEcCCcCCCCCC--eEEEecccEEEEEEcccccccCCceEEEe-cccEEEEEhhhceecCC
Confidence            3468999999998777  99999999999999853    57999987 78999999999998764

>d1uhfa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=5.5e-18  Score=95.40  Aligned_cols=59  Identities=19%  Similarity=0.401  Sum_probs=51.1

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+...++|+|+|++..++  ||+|++||+|.|++++ ++||+++. +|+.|+||++||+.+..
T Consensus         6 ~~~~~~vAl~~y~~~~~~--eLs~~~Gd~v~vl~~~-~~Ww~~~~-~g~~G~vP~~yv~~~~~   64 (69)
T d1uhfa_           6 SGGEEYIALYPYSSVEPG--DLTFTEGEEILVTQKD-GEWWTGSI-GDRSGIFPSNYVKPKDS   64 (69)
T ss_dssp             CCSEEEECSSCBCCSSSS--BCCBCTTCEEEECEEE-TTEEEECS-TTCCEEECGGGCEECCC
T ss_pred             CCCcEEEECccCCCCCcC--CcCCCCCCEEEEEEec-CCEEEEEE-CCcEEEEchhhEEECCC
Confidence            345678999999988777  9999999999999875 57999986 78999999999998653

>d1ugva_ b.34.2.1 (A:) Olygophrenin-1 like protein (KIAA0621) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Olygophrenin-1 like protein (KIAA0621)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=6.1e-18  Score=95.93  Aligned_cols=60  Identities=20%  Similarity=0.288  Sum_probs=50.4

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCC-CceEEEcCCCcEEEEcCCceEeccccC
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNK-DWWQVIRSSGKPFYVPASYVEVYKKLS   67 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~-~Ww~~~~~~g~~G~vP~~yv~~~~~~~   67 (101)
                      ...++|||+|.++..+  ||+|++||+|.|+++.++ .||.++. +|+.|+||++||+.+...+
T Consensus        10 ~~~~~alydy~~~~~~--eLs~~~Gd~i~v~~~~~~~~W~~g~~-~g~~G~~P~~yve~i~~ps   70 (72)
T d1ugva_          10 FRKAKALYACKAEHDS--ELSFTAGTVFDNVHPSQEPGWLEGTL-NGKTGLIPENYVEFLSGPS   70 (72)
T ss_dssp             CCCEEESSCBCCCSSS--BCCBCTTCEEBSCCBCSSTTEEEEES-SSCEEEEEGGGEEECCSSC
T ss_pred             CEEEEEcccCCCCCCC--EecCCCCCEEEEeeccCCCCEEEEEe-CCCEEEEchHHEEECCCCC
Confidence            3468999999988777  999999999999988655 4777765 7899999999999886543

>d2hspa_ b.34.2.1 (A:) Phospholipase C, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phospholipase C, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=6.1e-19  Score=99.91  Aligned_cols=59  Identities=20%  Similarity=0.468  Sum_probs=51.4

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .++|+|||+|+++.++  +|+|++||+|.|+++.+++||.++..++..|+||++||+++..
T Consensus         6 ~~~v~Aly~f~a~~~~--eLsf~~Gd~i~v~~~~~~~Ww~g~~~~~~~G~fP~~yv~~~~~   64 (71)
T d2hspa_           6 KCAVKALFDYKAQRED--ELTFIKSAIIQNVEKQEGGWWRGDYGGKKQLWFPSNYVEEMVN   64 (71)
T ss_dssp             SSCEECCSCCCCSSSS--SCCCCTTCEEBSCCCBTTTEECCBCSSCCSCCEETTTCCSCSC
T ss_pred             cEEEEEcccCCcCCcC--CccCCCCCEEEEEEecCCCEEEEEECCeEEEEEchHHeEEcCC
Confidence            3468999999988777  9999999999999998899999987556678999999988754

>d1uhca_ b.34.2.1 (A:) Hypothetical protein Baa76854.1 (KIAA1010) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hypothetical protein Baa76854.1 (KIAA1010)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.70  E-value=2e-17  Score=95.32  Aligned_cols=59  Identities=22%  Similarity=0.501  Sum_probs=50.8

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC----CCCceEEEcCCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT----NKDWWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~----~~~Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      +...++|||+|.++.++  ||+|++||+|.|+++.    +.+||.++. +|+.|+||++||+.+..
T Consensus        12 ~~~~~~Alydy~a~~~~--ELs~~~Gd~i~vl~~~~~~~~~~W~~g~~-~g~~G~vP~~yv~~~~~   74 (79)
T d1uhca_          12 GNQVYFAVYTFKARNPN--ELSVSANQKLKILEFKDVTGNTEWWLAEV-NGKKGYVPSNYIRKTES   74 (79)
T ss_dssp             SSCCEEESSCBCCCSSS--BCCBCTTCEEEEEESCCTTSCTTEEEEES-SSCEEEEEGGGEEECCS
T ss_pred             CCEEEEECccCCCCCCC--CccCCCCCEEEEEEeecCCCCCCEEEEEE-CCCEEEEehhhEEECCC
Confidence            34468999999998777  9999999999999874    357999986 88999999999998764

>d1kjwa1 b.34.2.1 (A:430-525) Psd-95 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Psd-95
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.70  E-value=1.8e-18  Score=102.95  Aligned_cols=59  Identities=19%  Similarity=0.465  Sum_probs=49.9

Q ss_pred             cEEEEEEeccCCCCCC---CCCccccCCCEEEEEEcCCCCceEEEc-----CCCcEEEEcCCceEec
Q psy6758           5 DVTLKVLYDFDYSTKD---GKYVRIQEGEKLFLIKKTNKDWWQVIR-----SSGKPFYVPASYVEVY   63 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~---~~eLs~~~g~~l~vl~~~~~~Ww~~~~-----~~g~~G~vP~~yv~~~   63 (101)
                      .++|+|||||++...+   +.+|+|++||+|.|+++.+++||.++.     .+|+.|+||+|||.+.
T Consensus         1 ~~~vrAlydy~~~~d~~~~~~eLsf~kGdil~V~~~~d~~WW~~~~~~~~~~~g~~G~~Psnyv~e~   67 (96)
T d1kjwa1           1 GFYIRALFDYDKTKDCGFLSQALSFRFGDVLHVIDAGDEEWWQARRVHSDSETDDIGFIPSKRRVER   67 (96)
T ss_dssp             CEEEEESSCBCHHHHHCCCSSBCCBCTTCEEEEEECCSSSEEEEEECCSSCCCSCCEEEECHHHHHH
T ss_pred             CEEEEEcccCcCCcCCCCCCccceEcCCCEEEEeeeccCceEEEEEccCCCCCCCEeEEeccceeee
Confidence            4789999999986432   348999999999999999999999985     3568999999999754

>d1uffa_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3e-17  Score=96.91  Aligned_cols=61  Identities=21%  Similarity=0.319  Sum_probs=51.0

Q ss_pred             CCcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC--CCceEEEcCCCcEEEEcCCceEecccc
Q psy6758           3 LQDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN--KDWWQVIRSSGKPFYVPASYVEVYKKL   66 (101)
Q Consensus         3 ~~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~--~~Ww~~~~~~g~~G~vP~~yv~~~~~~   66 (101)
                      .+...++|||+|.++..+  ||+|++||+|.|+.+.+  ..||.++. +|+.||||++||+.+...
T Consensus         3 ~~~~~~rAlydy~~~~~~--ELs~~~Gd~v~Vl~~~~~~~~w~~~~~-~g~~G~~P~~Yve~~~~~   65 (93)
T d1uffa_           3 SGSSGYRALYPFEARNHD--EMSFNSGDIIQVDEKTVGEPGWLYGSF-QGNFGWFPCNYVEKMPSS   65 (93)
T ss_dssp             SSCCCEEESSCBCCCSSS--CCCBCTTCEEEECSSCCCSSSEEEEEE-TTEEEEEETTTEEECCSS
T ss_pred             CCCeEEEECccCCCCCCC--CccCcCCCEEEEEEeccCCCCEEEEEe-CCcEEEEchHHEEECCCC
Confidence            345568999999988777  99999999999998763  45777775 899999999999987653

>d1zuua1 b.34.2.1 (A:2-57) BZZ1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BZZ1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.69  E-value=1.9e-17  Score=89.55  Aligned_cols=53  Identities=25%  Similarity=0.468  Sum_probs=44.4

Q ss_pred             EEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCc-eEEEc-CCCcEEEEcCCceEe
Q psy6758           8 LKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDW-WQVIR-SSGKPFYVPASYVEV   62 (101)
Q Consensus         8 ~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~W-w~~~~-~~g~~G~vP~~yv~~   62 (101)
                      ++|||+|+++.++  ||+|++||.|.|+.+.+.+| |.++. .+|+.|+||+|||+.
T Consensus         2 aralydf~a~~~~--ELs~~~Gd~i~v~~~~~~~~w~~~~~~~~g~~G~~P~nyvev   56 (56)
T d1zuua1           2 NKVLYAYVQKDDD--EITITPGDKISLVARDTGSGWTKINNDTTGETGLVPTTYIRI   56 (56)
T ss_dssp             CEECSCBCCCSTT--BCCBCTTCCEEEEECCSSSSEEEEEETTTTEEEEEEGGGEEC
T ss_pred             CEEeeeeCCCCCC--EeeECCCCEEEEEEEecCCCcEEEeCCCCceEEEEehhhEEC
Confidence            6899999998777  99999999999999876664 55544 468999999999973

>d1qcfa1 b.34.2.1 (A:80-145) Hemapoetic cell kinase Hck {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Hemapoetic cell kinase Hck
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.69  E-value=3.9e-17  Score=90.76  Aligned_cols=58  Identities=21%  Similarity=0.626  Sum_probs=49.4

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ...++|||||.++.++  ||+|++||.|.|++++ ++||.++. .+|+.|+||+|||+.+..
T Consensus         4 ~~~vvAlydy~~~~~~--eLs~~~Gd~i~v~~~~-~~ww~~~~~~~g~~G~vP~~yv~~~~~   62 (65)
T d1qcfa1           4 RIIVVALYDYEAIHHE--DLSFQKGDQMVVLEES-GEWWKARSLATRKEGYIPSNYVARVDS   62 (65)
T ss_dssp             CCEEEESSCBCCCSTT--BCCBCTTCEEEEEECC-TTEEEEEETTTCCEEEEEGGGEEETTC
T ss_pred             cEEEEECCcCCCCCcC--ccCCCCCCEEEEEEEC-CCCEEEEEccCCCEEEEchHHeEECcc
Confidence            3468999999998777  9999999999999865 57998876 457999999999998754

>d1spka_ b.34.2.1 (A:) BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19) {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: BAI1-associated protein 2-like 1 (RIKEN cDNA 1300006m19)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.69  E-value=2.8e-17  Score=93.12  Aligned_cols=59  Identities=15%  Similarity=0.331  Sum_probs=48.3

Q ss_pred             cEEEEEEeccCCCC-CCCCCccccCCCEEEEEEcC-CCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           5 DVTLKVLYDFDYST-KDGKYVRIQEGEKLFLIKKT-NKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         5 ~~~~~aly~f~~~~-~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ..+|+|||+|++.. ++  +|+|++||+|.|+.+. .++||.++. ..++.|+||+|||+.+..
T Consensus         7 ~~~~~Alydy~~~~~~d--eLsf~~Gd~i~vl~~~~~~gW~~g~~~~~g~~G~fP~nyVe~i~~   68 (72)
T d1spka_           7 GQKVKTIFPHTAGNNKT--LLSFAQGDVLTLLIPEEKDGWLYGEHDTTKARGWFPSSYTKLLSG   68 (72)
T ss_dssp             SCEEECSSCBCCSSCSS--BCCBCTTCEEEECCSSCBTTEEEEEETTTCCEEEEEGGGCEECSS
T ss_pred             CCEEEEeeccCCCCCCC--EeeEcCCCEEEEEEeecCCCeEEEEECCCCCEEEEchhhEEECCC
Confidence            44789999998743 34  8999999999999765 456998886 357899999999998865

>d2iima1 b.34.2.1 (A:58-119) p56-lck tyrosine kinase, SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: p56-lck tyrosine kinase, SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=5.9e-17  Score=89.27  Aligned_cols=55  Identities=20%  Similarity=0.560  Sum_probs=47.3

Q ss_pred             cEEEEEEeccCCCCCCCCCccccCCCEEEEEEcCCCCceEEEc-CCCcEEEEcCCceEe
Q psy6758           5 DVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTNKDWWQVIR-SSGKPFYVPASYVEV   62 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~~~Ww~~~~-~~g~~G~vP~~yv~~   62 (101)
                      ...++|+|+|+++.++  ||+|++||+|.|+++.+ +||.++. .+|+.|+||++||++
T Consensus         6 ~~~~~al~dy~a~~~~--eLs~~~Gd~i~v~~~~~-~ww~~~~~~~g~~G~~P~~yV~~   61 (62)
T d2iima1           6 DNLVIALHSYEPSHDG--DLGFEKGEQLRILEQSG-EWWKAQSLTTGQEGFIPFNFVAK   61 (62)
T ss_dssp             TCEEEESSCBCCCSTT--BCCBCTTCEEEEEECCS-SEEEEEETTTCCEEEEEGGGEEE
T ss_pred             CcEEEECCCCCcCCcC--CcCCCCCCEEEEeEEcC-CCEEEEeccCCeEeEEcHHHEEe
Confidence            4468999999998777  99999999999999875 5887765 568999999999975

>d1phta_ b.34.2.1 (A:) Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Phosphatidylinositol 3-kinase (p85-alpha subunit, pi3k), SH3 domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=1.6e-17  Score=96.49  Aligned_cols=60  Identities=20%  Similarity=0.422  Sum_probs=51.0

Q ss_pred             CcEEEEEEeccCCCCCCCCCccccCCCEEEEEEcC---------------CCCceEEEc-CCCcEEEEcCCceEeccc
Q psy6758           4 QDVTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKT---------------NKDWWQVIR-SSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         4 ~~~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~---------------~~~Ww~~~~-~~g~~G~vP~~yv~~~~~   65 (101)
                      ++..++|||+|.++..+  ||+|++||+|.|+.+.               +++||.|++ .+|+.|+||+|||+.+..
T Consensus         2 ~G~~~raly~y~~~~~~--eLs~~~Gd~i~V~~~~~~~~~~~~~~~~~~~~~GW~~G~~~~~g~~G~FP~nYVe~i~~   77 (83)
T d1phta_           2 EGYQYRALYDYKKEREE--DIDLHLGDILTVNKGSLVALGFSDGQEARPEEIGWLNGYNETTGERGDFPGTYVEYIGR   77 (83)
T ss_dssp             EEEEEEECSCBCCSSTT--BCCBCTTCEEEEEHHHHHTTTCCTTGGGCHHHHCEEEEEETTTTEEEEEEGGGEEEEEE
T ss_pred             CCCEEEEcCccCCCCCC--cccccCCCEEEEEeccccccccccccccccCCCCeEEEEECCCCcEeeEehhhEEEcCC
Confidence            35679999999998777  9999999999999753               346999997 467999999999998754

>d1wiea_ b.34.2.1 (A:) RIM binding protein 2, RIMBP2 {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: RIM binding protein 2, RIMBP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.66  E-value=3.5e-17  Score=97.40  Aligned_cols=60  Identities=13%  Similarity=0.272  Sum_probs=48.4

Q ss_pred             EEEEEEeccCCCCC----CCCCccccCCCEEEEEEcCCCC-ceEEEcCCCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTK----DGKYVRIQEGEKLFLIKKTNKD-WWQVIRSSGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~----~~~eLs~~~g~~l~vl~~~~~~-Ww~~~~~~g~~G~vP~~yv~~~~~   65 (101)
                      .+|+|+|||++...    ...||+|++||+|.|+.+.+.+ ||.++..+|+.||||+|||+++..
T Consensus        18 ~~~~Alydy~~~~~~~~~~e~ELsf~~Gd~i~v~~~~~~~gW~~~~~~~G~~G~~P~nyve~~~~   82 (96)
T d1wiea_          18 HLCVARYSYNPFDGPNENPEAELPLTAGKYLYVYGDMDEDGFYEGELLDGQRGLVPSNFVDFVQD   82 (96)
T ss_dssp             EEEEESSCCCGGGSSCSCTTTBCCCCTTCEEEEESSCCSSSCCEEEETTCCBCBCCTTSEECCCS
T ss_pred             eEEEEeeeecCcccCCCCCCcEeeEcCCCEEEEEEeeCCCceEEEEeCCCCEEEEehHHeEECCC
Confidence            46899999987531    1248999999999999886654 777776789999999999997754

>d1t0ha_ b.34.2.1 (A:) SH3-like domain of the L-type calcium channel {Rabbit (Oryctolagus cuniculus) [TaxId: 9986]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rabbit (Oryctolagus cuniculus) [TaxId: 9986]

Probab=99.64  E-value=8.2e-17  Score=95.61  Aligned_cols=57  Identities=14%  Similarity=0.279  Sum_probs=48.0

Q ss_pred             cEEEEEEeccCCCCCCC-----CCccccCCCEEEEEEcCCCCceEEEcC--CCcEEEEcCCceE
Q psy6758           5 DVTLKVLYDFDYSTKDG-----KYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVE   61 (101)
Q Consensus         5 ~~~~~aly~f~~~~~~~-----~eLs~~~g~~l~vl~~~~~~Ww~~~~~--~g~~G~vP~~yv~   61 (101)
                      ..+|+|+|||++..++.     ..|+|++||+|.|+++.+++||.|+..  +|+.||||++|+.
T Consensus        21 ~~~vrAlydY~~~~dd~~P~~~~~LsF~~GDii~v~~~~d~~WW~gr~~~~~g~~G~~PS~~~~   84 (96)
T d1t0ha_          21 AFAVRTNVRYSAAQEDDVPVPGMAISFEAKDFLHVKEKFNNDWWIGRLVKEGCEIGFIPSPVKL   84 (96)
T ss_dssp             CEEEEESSCBCCCGGGCCSSTTCBCCBCTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHHH
T ss_pred             cEEEEEeeccCCCCCCCCccccccccCCCCCEEEEeeeeCCCceEEEEcCCCCCEEEecCcHHH
Confidence            35799999999987661     129999999999999999999999983  4688999998754

>d1bb9a_ b.34.2.1 (A:) Amphiphysin 2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Amphiphysin 2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.62  E-value=1.6e-16  Score=92.19  Aligned_cols=56  Identities=14%  Similarity=0.332  Sum_probs=47.1

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEcCC-----CCceEEEcC---------CCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKKTN-----KDWWQVIRS---------SGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~~~-----~~Ww~~~~~---------~g~~G~vP~~yv~~~   63 (101)
                      ..|+|||+|+++.++  ||+|++||+|.|+.+.+     ++||.+...         +|+.|+||+|||+.+
T Consensus        13 ~~~~Alydy~a~~~~--ELs~~~Gd~i~Vl~~~~~~~~~dgWw~G~~~~~~~~~~~~~g~~G~fP~nyVe~i   82 (83)
T d1bb9a_          13 FKVQAQHDYTATDTD--ELQLKAGDVVLVIPFQNPEEQDEGWLMGVKESDWNQHKELEKCRGVFPENFTERV   82 (83)
T ss_dssp             EEEEESSCBCCSSTT--BCCBCTTCEEEEECCSCGGGCCTTEEEEEEHHHHHTTCCHHHHCEEEEGGGEEEE
T ss_pred             EEEEEceeECCCCCC--EecCcCCCEEEEEEccCCCcccCCEeEEEecCCccccccCCCCEEEEchhHeEEc
Confidence            368999999998777  99999999999998753     469998752         357899999999875

>d1i1ja_ b.34.2.1 (A:) Melanoma inhibitory activity protein {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Melanoma inhibitory activity protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.61  E-value=6.5e-16  Score=93.33  Aligned_cols=58  Identities=17%  Similarity=0.324  Sum_probs=48.5

Q ss_pred             EEEEEEeccCCCCCCCCCccccCCCEEEEEEc---CCCCceEEEcC-------CCcEEEEcCCceEeccc
Q psy6758           6 VTLKVLYDFDYSTKDGKYVRIQEGEKLFLIKK---TNKDWWQVIRS-------SGKPFYVPASYVEVYKK   65 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~~eLs~~~g~~l~vl~~---~~~~Ww~~~~~-------~g~~G~vP~~yv~~~~~   65 (101)
                      ..++|||+|.++..+  +|+|++||+|.|+.+   .+.+||.|+..       +|+.||||+|||+++..
T Consensus        22 ~~~~Alydy~~~~~~--eL~f~~Gd~i~Vl~k~~~~~~~WW~g~~~g~~~~~~~g~~G~fP~nyV~~~~~   89 (106)
T d1i1ja_          22 SMAVALQDYMAPDCR--FLTIHRGQVVYVFSKLKGRGRLFWGGSVQGDYYGDLAARLGYFPSSIVREDQT   89 (106)
T ss_dssp             EEEEESSCBCCSSTT--BCCBCTTCEEEEEEEECGGGTTEEEEEEBCSSTTCBCSCCEEEEGGGEEEEEE
T ss_pred             eEEEEccccCCCCCC--CccCCCCCEEEEEEecCCCCcceEEEEecCccccccCCcccccccccEEEccc
Confidence            468999999988666  999999999999986   35689999752       24689999999998764

>d1gcqc_ b.34.2.1 (C:) Vav N-terminal SH3 domain {Mouse (Mus musculus) [TaxId: 10090]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Vav N-terminal SH3 domain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.59  E-value=2.4e-15  Score=84.33  Aligned_cols=58  Identities=19%  Similarity=0.450  Sum_probs=46.3

Q ss_pred             EEEEEEeccCCC----CCCCCCccccCCCEEEEEEcC-CCCceEEEcC-CCcEEEEcCCceEec
Q psy6758           6 VTLKVLYDFDYS----TKDGKYVRIQEGEKLFLIKKT-NKDWWQVIRS-SGKPFYVPASYVEVY   63 (101)
Q Consensus         6 ~~~~aly~f~~~----~~~~~eLs~~~g~~l~vl~~~-~~~Ww~~~~~-~g~~G~vP~~yv~~~   63 (101)
                      ..++|+++|.+.    +.+..+|+|++||+|.|++.. +++||.+++. +|+.|+||+|||+++
T Consensus         5 Pk~~a~~~y~~~~~~~~~~~~eLsf~~GD~i~Vl~~~~~~gWw~G~~~~~g~~G~fP~nyVePy   68 (69)
T d1gcqc_           5 PKMEVFQEYYGIPPPPGAFGPFLRLNPGDIVELTKAEAEHNWWEGRNTATNEVGWFPCNRVHPY   68 (69)
T ss_dssp             CEEEECSCBSSSSCCGGGCSCBCCBCTTCEEEEEECCTTCSEEEEEETTTTEEEEEEGGGEEEC
T ss_pred             CcEEEeeeEeccCCCCCCCCCEeeEcCCCEEEEEEEecCCCEEEEEECCCCCEEEEeHHHEEEc
Confidence            357888888652    123349999999999999864 5689999974 689999999999864

>d1vyva1 b.34.2.1 (A:71-215) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.53  E-value=2.6e-15  Score=95.10  Aligned_cols=57  Identities=16%  Similarity=0.249  Sum_probs=47.8

Q ss_pred             EEEEEEeccCCCCCC-----CCCccccCCCEEEEEEcCCCCceEEEc--CCCcEEEEcCCceEe
Q psy6758           6 VTLKVLYDFDYSTKD-----GKYVRIQEGEKLFLIKKTNKDWWQVIR--SSGKPFYVPASYVEV   62 (101)
Q Consensus         6 ~~~~aly~f~~~~~~-----~~eLs~~~g~~l~vl~~~~~~Ww~~~~--~~g~~G~vP~~yv~~   62 (101)
                      ++|+|+|||++...+     ...|+|++||+|.|+++.+.+||.|++  .+|..|+||++|+.+
T Consensus        24 f~vra~~dy~~~~d~~~p~~~~~LsF~kGDii~V~~~~d~~WW~gr~~~~~g~~G~iPS~~~~e   87 (145)
T d1vyva1          24 FAVKTNVSYCGALDEDVPVPSSAVSFDAKDFLHIKEKYNNDWWIGRLVKEGCEIGFIPSPLRLE   87 (145)
T ss_dssp             EEEEESSCBCTTSCCSCSSTTCBCCBCTTCEEEEEEEEETTEEEEEESSTTCCCEEEECHHHHH
T ss_pred             EEEEEeeeeCCccCCcCCcccccccCcCCCEEEEeeccCCCcEEEEEcCCCCceeEeCCchhhh
Confidence            369999999987665     112999999999999999999999997  357889999987654

>d1vyua1 b.34.2.1 (A:39-174) SH3-like domain of the L-type calcium channel {Rat (Rattus norvegicus) [TaxId: 10116]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: SH3-like domain of the L-type calcium channel
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.43  E-value=3.4e-14  Score=89.04  Aligned_cols=57  Identities=14%  Similarity=0.253  Sum_probs=47.3

Q ss_pred             EEEEEEeccCCCCCCC-----CCccccCCCEEEEEEcCCCCceEEEcC--CCcEEEEcCCceEe
Q psy6758           6 VTLKVLYDFDYSTKDG-----KYVRIQEGEKLFLIKKTNKDWWQVIRS--SGKPFYVPASYVEV   62 (101)
Q Consensus         6 ~~~~aly~f~~~~~~~-----~eLs~~~g~~l~vl~~~~~~Ww~~~~~--~g~~G~vP~~yv~~   62 (101)
                      +.|+|+|+|++..++.     ..|+|++||+|.|+++.+.+||.++..  +|..||||+.|+.+
T Consensus        24 ~~vra~~~Y~~~~d~~~P~~~~~LsF~~gdil~v~~~~d~~WW~~r~~~~~~~~G~iPs~~~lE   87 (136)
T d1vyua1          24 FAVRTNVSYCGVLDEECPVQGSGVNFEAKDFLHIKEKYSNDWWIGRLVKEGGDIAFIPSPQRLE   87 (136)
T ss_dssp             EEEEESSCEEGGGCTTCSSTTCBCEECTTCEEEEEEECSSSEEEEEESSTTCCCEEEECHHHHH
T ss_pred             EEEEEeeccCCCCCCCCcccCcccCCCCCCEEEEEeccCCCcEEEEeccCCCceeccCchHHHh
Confidence            4689999999876651     129999999999999999999999973  45789999988543

>d1ri9a_ b.34.2.1 (A:) Fyn-binding protein (T-cell adapter protein adap) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Fyn-binding protein (T-cell adapter protein adap)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2.7e-06  Score=47.39  Aligned_cols=40  Identities=28%  Similarity=0.346  Sum_probs=37.0

Q ss_pred             CCCccccCCCEEEEEEcCCCCceEEEcCCCcEEEEcCCce
Q psy6758          21 GKYVRIQEGEKLFLIKKTNKDWWQVIRSSGKPFYVPASYV   60 (101)
Q Consensus        21 ~~eLs~~~g~~l~vl~~~~~~Ww~~~~~~g~~G~vP~~yv   60 (101)
                      ..+|++++||.|.||+..+++-|.+|+..|.-|||+.+++
T Consensus        36 ~~dL~vk~GE~ldVIr~t~~~k~LcRN~~GkYGYV~~~~l   75 (77)
T d1ri9a_          36 TRDLQVKPGESLEVIQTTDDTKVLCRNEEGKYGYVLRSYL   75 (77)
T ss_dssp             TTBCCCCTTCBCEEEEESSSSEEEEEETTTEEEEEEGGGS
T ss_pred             cccCCcCCCCEEEEEEeCCCCeEEEEcCCCcEEEEEeeee
Confidence            4599999999999999998899999999999999998876

>d1udla_ b.34.2.1 (A:) Intersectin 2 (KIAA1256) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: SH3-like barrel
superfamily: SH3-domain
family: SH3-domain
domain: Intersectin 2 (KIAA1256)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.64  E-value=0.036  Score=31.04  Aligned_cols=18  Identities=33%  Similarity=0.395  Sum_probs=14.8

Q ss_pred             CCcEEEEcCCceEecccc
Q psy6758          49 SGKPFYVPASYVEVYKKL   66 (101)
Q Consensus        49 ~g~~G~vP~~yv~~~~~~   66 (101)
                      .|+.|+||++|++.+.+.
T Consensus         6 ~G~~G~~P~~yv~~~~~~   23 (98)
T d1udla_           6 SGQKGWFPASHVKLLGPS   23 (98)
T ss_dssp             SSCCSSCCCCCCCCCSCC
T ss_pred             CCceeeEcccceeECCCc
Confidence            578899999999876553